Your job contains 1 sequence.
>005632
MELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEV
VRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQ
AMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLF
LKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGK
ELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALK
YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE
EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL
VCESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARAR
KKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLC
KALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYIL
QLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASH
HQDAARCYLEAYKLLPENPLINLKRLN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005632
(687 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007928 - symbol:AT1G17680 species:3702 "Arabi... 600 1.8e-111 2
DICTYBASE|DDB_G0278321 - symbol:gtf3C3 "transcription fac... 250 1.2e-32 2
UNIPROTKB|I3LAX1 - symbol:GTF3C3 "Uncharacterized protein... 265 1.7e-26 2
RGD|1309185 - symbol:Gtf3c3 "general transcription factor... 248 3.6e-25 2
UNIPROTKB|E1BPR9 - symbol:GTF3C3 "Uncharacterized protein... 249 1.5e-24 2
UNIPROTKB|E2QYG3 - symbol:GTF3C3 "Uncharacterized protein... 244 9.6e-23 2
UNIPROTKB|F1NEE6 - symbol:GTF3C3 "Uncharacterized protein... 235 2.5e-22 2
UNIPROTKB|Q9Y5Q9 - symbol:GTF3C3 "General transcription f... 240 2.7e-22 2
POMBASE|SPCC16C4.14c - symbol:sfc4 "transcription factor ... 156 8.4e-13 3
CGD|CAL0004061 - symbol:TFC4 species:5476 "Candida albica... 156 2.4e-10 2
ASPGD|ASPL0000055827 - symbol:AN0407 species:162425 "Emer... 146 1.1e-09 3
MGI|MGI:3039590 - symbol:Tmtc1 "transmembrane and tetratr... 165 2.0e-08 1
TAIR|locus:2103025 - symbol:SEC "secret agent" species:37... 152 6.4e-08 2
UNIPROTKB|Q747S4 - symbol:GSU3191 "TPR domain protein" sp... 154 6.5e-08 2
TIGR_CMR|GSU_3191 - symbol:GSU_3191 "TPR domain protein" ... 154 6.5e-08 2
SGD|S000003279 - symbol:TFC4 "Subunit of TFIIIC RNA pol I... 129 2.2e-07 2
UNIPROTKB|F1N5E9 - symbol:TMTC1 "Uncharacterized protein"... 153 4.0e-07 1
UNIPROTKB|P73091 - symbol:slr2048 "Slr2048 protein" speci... 147 4.8e-07 1
RGD|1564868 - symbol:Tmtc1 "transmembrane and tetratricop... 152 4.9e-07 1
UNIPROTKB|Q74DZ8 - symbol:GSU1166 "TPR domain protein" sp... 141 8.0e-07 1
TIGR_CMR|GSU_1166 - symbol:GSU_1166 "TPR domain protein" ... 141 8.0e-07 1
UNIPROTKB|Q8IUR5 - symbol:TMTC1 "Transmembrane and TPR re... 148 1.4e-06 2
UNIPROTKB|Q83DZ1 - symbol:CBU_0547 "Tetratricopeptide rep... 144 1.9e-06 1
TIGR_CMR|CBU_0547 - symbol:CBU_0547 "TPR domain protein" ... 144 1.9e-06 1
ZFIN|ZDB-GENE-030131-574 - symbol:ift88 "intraflagellar t... 142 5.6e-06 1
UNIPROTKB|Q13099 - symbol:IFT88 "Intraflagellar transport... 141 6.9e-06 1
RGD|1309717 - symbol:Ift88 "intraflagellar transport 88 h... 139 1.1e-05 1
UNIPROTKB|E1C168 - symbol:IFT88 "Uncharacterized protein"... 139 1.1e-05 1
MGI|MGI:98715 - symbol:Ift88 "intraflagellar transport 88... 139 1.1e-05 1
RGD|1309134 - symbol:Bbs4 "Bardet-Biedl syndrome 4" speci... 136 1.2e-05 1
UNIPROTKB|F1SI91 - symbol:BBS4 "Uncharacterized protein" ... 134 2.0e-05 1
UNIPROTKB|Q1JQ97 - symbol:BBS4 "Bardet-Biedl syndrome 4 p... 133 2.6e-05 1
MGI|MGI:2143311 - symbol:Bbs4 "Bardet-Biedl syndrome 4 (h... 133 2.6e-05 1
UNIPROTKB|Q96RK4 - symbol:BBS4 "Bardet-Biedl syndrome 4 p... 130 5.6e-05 1
UNIPROTKB|Q233J3 - symbol:TTHERM_00391570 "DNA polymerase... 137 6.2e-05 1
WB|WBGene00003885 - symbol:osm-5 species:6239 "Caenorhabd... 142 6.7e-05 2
UNIPROTKB|E1BLX1 - symbol:IFT88 "Uncharacterized protein"... 131 8.2e-05 1
UNIPROTKB|Q28G25 - symbol:bbs4 "Bardet-Biedl syndrome 4 p... 128 0.00012 2
UNIPROTKB|Q74A82 - symbol:GSU2508 "TPR domain protein" sp... 127 0.00012 1
TIGR_CMR|GSU_2508 - symbol:GSU_2508 "TPR domain protein" ... 127 0.00012 1
UNIPROTKB|E1C9K0 - symbol:CTR9 "Uncharacterized protein" ... 129 0.00021 1
UNIPROTKB|Q6PD62 - symbol:CTR9 "RNA polymerase-associated... 129 0.00021 1
UNIPROTKB|F1S6V3 - symbol:CTR9 "Uncharacterized protein" ... 129 0.00021 1
MGI|MGI:109345 - symbol:Ctr9 "Ctr9, Paf1/RNA polymerase I... 129 0.00021 1
UNIPROTKB|G3V897 - symbol:Ctr9 "SH2 domain binding protei... 129 0.00021 1
ZFIN|ZDB-GENE-030131-9631 - symbol:ogt.1 "O-linked N-acet... 128 0.00024 1
ZFIN|ZDB-GENE-060126-2 - symbol:bbs4 "Bardet-Biedl syndro... 127 0.00025 2
FB|FBgn0033578 - symbol:BBS4 "BBS4" species:7227 "Drosoph... 123 0.00029 1
UNIPROTKB|F1NX56 - symbol:OGT "Uncharacterized protein" s... 125 0.00049 1
UNIPROTKB|A5D7G1 - symbol:OGT "OGT protein" species:9913 ... 125 0.00049 1
RGD|62060 - symbol:Ogt "O-linked N-acetylglucosamine (Glc... 125 0.00049 1
UNIPROTKB|Q5LPE5 - symbol:SPO2903 "TPR/sulfotransferase d... 122 0.00049 1
TIGR_CMR|SPO_2903 - symbol:SPO_2903 "TPR/sulfotransferase... 122 0.00049 1
UNIPROTKB|E2QSQ5 - symbol:OGT "Uncharacterized protein" s... 125 0.00049 1
UNIPROTKB|O15294 - symbol:OGT "UDP-N-acetylglucosamine--p... 125 0.00049 1
UNIPROTKB|F1RSV2 - symbol:OGT "UDP-N-acetylglucosamine--p... 125 0.00049 1
UNIPROTKB|Q27HV0 - symbol:OGT "UDP-N-acetylglucosamine--p... 125 0.00049 1
UNIPROTKB|P81436 - symbol:OGT "UDP-N-acetylglucosamine--p... 125 0.00049 1
MGI|MGI:1339639 - symbol:Ogt "O-linked N-acetylglucosamin... 125 0.00049 1
UNIPROTKB|F1NGP6 - symbol:BBS4 "Uncharacterized protein" ... 121 0.00052 1
UNIPROTKB|Q74BQ4 - symbol:GSU1987 "TPR domain lipoprotein... 124 0.00052 1
TIGR_CMR|GSU_1987 - symbol:GSU_1987 "TPR domain protein" ... 124 0.00052 1
UNIPROTKB|Q4QR29 - symbol:ctr9 "RNA polymerase-associated... 125 0.00055 1
UNIPROTKB|Q74D87 - symbol:GSU1432 "TPR domain protein" sp... 121 0.00061 1
TIGR_CMR|GSU_1432 - symbol:GSU_1432 "TPR domain protein" ... 121 0.00061 1
UNIPROTKB|G4N4R1 - symbol:MGG_05151 "NMDA receptor-regula... 133 0.00063 2
UNIPROTKB|F1NNA8 - symbol:Gga.1615 "Uncharacterized prote... 134 0.00066 2
WB|WBGene00003858 - symbol:ogt-1 species:6239 "Caenorhabd... 124 0.00070 1
UNIPROTKB|O18158 - symbol:ogt-1 "UDP-N-acetylglucosamine-... 124 0.00070 1
UNIPROTKB|O14879 - symbol:IFIT3 "Interferon-induced prote... 119 0.00081 1
UNIPROTKB|Q5LX99 - symbol:SPO0317 "TPR domain protein" sp... 124 0.00086 3
TIGR_CMR|SPO_0317 - symbol:SPO_0317 "TPR domain protein" ... 124 0.00086 3
WB|WBGene00014114 - symbol:tftc-3 species:6239 "Caenorhab... 116 0.00093 4
>TAIR|locus:2007928 [details] [associations]
symbol:AT1G17680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009410 "response to xenobiotic stimulus" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50293
SMART:SM00028 EMBL:CP002684 Gene3D:1.25.40.10 KO:K15201 OMA:ASILEDH
EMBL:BT002323 IPI:IPI00526440 RefSeq:NP_173210.3 RefSeq:NP_850945.1
UniGene:At.16020 ProteinModelPortal:Q8GUP0 SMR:Q8GUP0 STRING:Q8GUP0
PRIDE:Q8GUP0 EnsemblPlants:AT1G17680.1 EnsemblPlants:AT1G17680.2
GeneID:838344 KEGG:ath:AT1G17680 TAIR:At1g17680
HOGENOM:HOG000029453 InParanoid:Q8GUP0 PhylomeDB:Q8GUP0
ProtClustDB:CLSN2679985 ArrayExpress:Q8GUP0 Genevestigator:Q8GUP0
Uniprot:Q8GUP0
Length = 896
Score = 600 (216.3 bits), Expect = 1.8e-111, Sum P(2) = 1.8e-111
Identities = 146/440 (33%), Positives = 229/440 (52%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN-HKSAFDF 90
P + K EA +A+G +A+ +L EV++ +P Y L LG S+ +
Sbjct: 150 PDILKRFREALFLHAHGRDIEALPILVEVIKQAPAFDIAYYYLSRVSEQLGKTESSSTEA 209
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
IAA++ S WK L ++ + + A Y +AI+A+P DI L+ A + G
Sbjct: 210 LKIAANIKGSKSPFWKLLYERFKEQENISVARSYASKAIQADPDDIPLKYEYADICLNTG 269
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
Y +AAE++EQI + P+ ++A K G Q FLK G+ R+ ILE+++K H S+ V+D
Sbjct: 270 KYREAAETFEQIFRRCPERIEALKWGVQYFLKSGEGERAASILEDHIKSHSSEVGHDVLD 329
Query: 211 LLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADL 270
LL ++ M+ NA+++ L++I + + GKEL LK++ IC++ L ME+AE + + L
Sbjct: 330 LLASVFMKINAHDRALKYIHDVRQIYNVGKELSSSLKIRQAICHVHLEEMEQAESVLSIL 389
Query: 271 QWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKER 330
+ +H +LIT +AD L ++G+ +SALKYY +E + NG L++K+A CY+SL+ER
Sbjct: 390 PQEAVSEHPELITNLADELTNIGNFHSALKYY--IEAISEPVNGNLFVKIARCYMSLEER 447
Query: 331 AHAIMFFYKALDRFEDNIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNSDKSNPW 390
AI+F+YKAL+ D +D ++ K W
Sbjct: 448 KQAIVFYYKALNELSDTVDVRITLASLLLEDGKRDEAVLVLSPPENPDP---DTAKLKAW 504
Query: 391 WLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQQRTK 450
W N KI M LC IY ++GM EDF + LV + + R+ VK KR+ QR K
Sbjct: 505 WKNRKIRMNLCQIYHSEGMLEDFANTALQLVLKWVW----RRTVKGKRKRLVLSEHQRNK 560
Query: 451 IYNNLPTDSILCGIRPAAPK 470
P D+ +R PK
Sbjct: 561 -KRRRPRDAQASQLR-GGPK 578
Score = 528 (190.9 bits), Expect = 1.8e-111, Sum P(2) = 1.8e-111
Identities = 101/182 (55%), Positives = 137/182 (75%)
Query: 502 VEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMR 561
++ H++D ES++E ++K+EE L +DLCKALASLQRY EA EI+NL+ R
Sbjct: 599 IKAHNEDVCSESEEE---------VIKDEEYHRLFVDLCKALASLQRYWEALEIVNLARR 649
Query: 562 LAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMG 621
L +LP+E K+EL+SLGAK++ D+ DP FDC + ++Q HPY L+AWNCYY V+SR+G
Sbjct: 650 LDAKMLPVETKKELQSLGAKISCDTMDPKQWFDCVRSVIQQHPYRLNAWNCYYSVISRLG 709
Query: 622 KINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLI 681
K + S +KF+ +LR+KY+DCVPPI+I+GH FT+ S HQDAAR YLEAYKL+PE+PLI
Sbjct: 710 K---RASTEAKFMHHLRSKYRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPESPLI 766
Query: 682 NL 683
NL
Sbjct: 767 NL 768
>DICTYBASE|DDB_G0278321 [details] [associations]
symbol:gtf3C3 "transcription factor IIIC-gamma
subunit" species:44689 "Dictyostelium discoideum" [GO:0000127
"transcription factor TFIIIC complex" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 dictyBase:DDB_G0278321 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 Gene3D:1.25.40.10 GO:GO:0000127 eggNOG:NOG275814
KO:K15201 RefSeq:XP_642287.1 ProteinModelPortal:Q54YB5 PRIDE:Q54YB5
EnsemblProtists:DDB0231090 GeneID:8621494 KEGG:ddi:DDB_G0278321
InParanoid:Q54YB5 OMA:ASILEDH ProtClustDB:CLSZ2846841
Uniprot:Q54YB5
Length = 997
Score = 250 (93.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 83/326 (25%), Positives = 145/326 (44%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V K+L + QY GNF+ A S EVVR+ P L YN LG + G ++A FYV
Sbjct: 231 VRKLLVGGNEQYTKGNFDLAFSTYAEVVRMLPRLSIPYNILGKIKESQGEMEAALGFYVY 290
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A + + W + A + G A+Y +A R + D+ + ++ G Y+
Sbjct: 291 GAQMQGSNGD-WSSIGVRAKEAGQMETALYCFSRACRNDETDLDSFWEKSLILIQKGFYK 349
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ----TARSIGILEEYLKVHPS--DADLS 207
+A + ++ K + + A+++ Q +A +++E L + S D L
Sbjct: 350 RALKILTKLSKYTNGSPQVLQELARVYSHLSQYHDASAMISEVVDEQLLSNKSLDDVSLD 409
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLG----NMEKA 263
++L++ + + Y+ T+ + E+P L A Y LG N +
Sbjct: 410 SVNLMMELKNKTRNYQDTITIFNKITAKYGNDSEVPFDLVFNACQAYYSLGTDFGNERGS 469
Query: 264 EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAE 322
++L L + ++ DL T +AD L +LG AL Y H +T+ + ++ K+A+
Sbjct: 470 KLLHLRLLPLDPSEYGDLFTSLADELFALGKYQDALVVYLHLKDTDFDIPSNWV--KIAD 527
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNI 348
+ S K AI +F KA +R N+
Sbjct: 528 IHRSTKNYEVAIEYFSKANERVPGNV 553
Score = 193 (73.0 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 520 EPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLG 579
E P LL E+ L++D K L R +EAS+ + ++R + L +L+ L
Sbjct: 721 EHPYAELLDEEDYFNLLLDSSKIFVHLNRQQEASQYLRYALRNIHFENGLFS-HQLKFLT 779
Query: 580 AKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRA 639
+A++ + + KY+ PYS WN + K++ G ++ + ++F+ +
Sbjct: 780 VAVAFNDKNYYLAYKHVKYVCSKKPYSNRVWNLFNKIIVNYG---NRSTVQNRFLTKINE 836
Query: 640 KYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
KY D +P +I+ G+Q + + A Y++AY+L P++PLINL
Sbjct: 837 KYSDSIPVLIMLGNQNKQTDNARGALFEYIKAYRLCPDDPLINL 880
Score = 71 (30.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 36/160 (22%), Positives = 70/160 (43%)
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA-LWKQLLT--FAVQKGDTAQAM 122
N + Y +LG + GN + + ++ L P + L+ L FA+ K A +
Sbjct: 451 NACQAYYSLG---TDFGNERGSKLLHLRLLPLDPSEYGDLFTSLADELFALGKYQDALVV 507
Query: 123 YYIRQAIRAEPKDI-SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
Y ++ DI S + +A + +YE A E + + + P NV T ++++
Sbjct: 508 YL---HLKDTDFDIPSNWVKIADIHRSTKNYEVAIEYFSKANERVPGNVHTTLAMSEIYK 564
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
+ G +++ IL + + + D S +L + L E N+
Sbjct: 565 EMGDDEKALQILNQSSTISNRN-DQSEKELFESTLNELNS 603
Score = 48 (22.0 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 13/84 (15%), Positives = 36/84 (42%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G ++ A+ + + ++P + + H + N++ A +++ A P +
Sbjct: 496 FALGKYQDALVVYLHLKDTDFDIPSNWVKIADIHRSTKNYEVAIEYFSKANERVPGNVHT 555
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQA 128
+ + GD +A+ + Q+
Sbjct: 556 TLAMSEIYKEMGDDEKALQILNQS 579
Score = 42 (19.8 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
P +D TK +LF + Q ++ +YL +
Sbjct: 643 PVGLDVTKEDVKLFYRHAQAFLNLSKYSQYLGI 675
>UNIPROTKB|I3LAX1 [details] [associations]
symbol:GTF3C3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GO:GO:0000127 OMA:IHLAIHY GeneTree:ENSGT00390000016929
EMBL:CU466965 Ensembl:ENSSSCT00000031776 Uniprot:I3LAX1
Length = 916
Score = 265 (98.3 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 60/259 (23%), Positives = 129/259 (49%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++GEA++++A G E+AI + E++R +P E ++TL + + G+ + + F +IAAH
Sbjct: 148 LMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAH 207
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L+P D+ W +L ++++ + QA++ +A++ EP ++ +S Y ++GD++ A
Sbjct: 208 LNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAM 267
Query: 157 ESYEQIQKLF-PDNVDA----TKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+ Y +I L P + D + A+ + + +I ++EE HP + +++
Sbjct: 268 DGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAINVIEEAFSKHPGLVSMEDVNI 327
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNME-KAEILFADL 270
+ + N Y+K L+ I + + + G +LR+G E K I+
Sbjct: 328 AGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTGCSFLRIGIWERKGRIIATRG 387
Query: 271 QWKNAIDHADLITEVADTL 289
+W + + + + D +
Sbjct: 388 RWNEVHEPSTRVGQTDDNV 406
Score = 117 (46.2 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 35/163 (21%), Positives = 75/163 (46%)
Query: 523 LPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKM 582
L ++L ++ L++ +L L R++EA +++ S+ +K++EL G
Sbjct: 646 LTSVLPKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRQKRKELEYFGLSA 705
Query: 583 AYDSTDPNHG--FDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAK 640
A D N G ++ + ++ H WN + ++ ++S+ +H +F L K
Sbjct: 706 AI--LDKNFGKAYNYIRLMVMEHVNKPQLWNIFNQIT-----MHSQDVRHHRFCLRLMLK 758
Query: 641 YKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
D +++GH ++ + A Y++A++ P PL +L
Sbjct: 759 NPDSHALCVLNGHNAFVSGSFKHALGQYVQAFRTYPHEPLYSL 801
Score = 103 (41.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
+P+ + VK +C + L +E L L +N D DL +VA+ + +G NSAL
Sbjct: 414 VPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPL 473
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALD 342
L + + ++L+ AEC +L A + K +D
Sbjct: 474 LSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVD 514
Score = 59 (25.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+G E+AAESY ++ L P ++DA + + L + G+ +++ LE
Sbjct: 499 LGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALE 544
>RGD|1309185 [details] [associations]
symbol:Gtf3c3 "general transcription factor IIIC, polypeptide 3"
species:10116 "Rattus norvegicus" [GO:0000127 "transcription factor
TFIIIC complex" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 RGD:1309185 Gene3D:1.25.40.10 EMBL:CH473965
GO:GO:0000127 KO:K15201 CTD:9330 OMA:IHLAIHY OrthoDB:EOG4CJVGH
GeneTree:ENSGT00390000016929 IPI:IPI00363793 RefSeq:NP_001101709.1
UniGene:Rn.6721 Ensembl:ENSRNOT00000002864 GeneID:316810
KEGG:rno:316810 UCSC:RGD:1309185 NextBio:671246 Uniprot:D4A7Q9
Length = 883
Score = 248 (92.4 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 76/303 (25%), Positives = 145/303 (47%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++GEA++++A G E+AI + E++R +P E ++TL + + G+ + + F +IAAH
Sbjct: 149 LMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAH 208
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L+P D+ W +L ++++ + QA++ +A++ EP ++ +S Y ++GD++ A
Sbjct: 209 LNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAM 268
Query: 157 ESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+ Y +I L P + + + A+ + + + +I I+EE H + +++
Sbjct: 269 DGYRRILNLLSPSDGERFMQLARDMAKSYYEANDSTSAINIIEEAFSKHQGLVSMEDVNI 328
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
+ + N Y+K L+ I FSG L K ++ G + AE + +
Sbjct: 329 AAELYISNKQYDKALE-----VITDFSGIILE-KETLEEGTSE----ENKAAETVTCSIP 378
Query: 272 WKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERA 331
ID + L L N L +E N D G LYL +AE +L + E
Sbjct: 379 DSVPIDITVKLMVCLVHLNILEPLNPLLTT--LVEQNP-EDMGDLYLDVAEAFLDVGEYN 435
Query: 332 HAI 334
A+
Sbjct: 436 SAL 438
Score = 143 (55.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 76/304 (25%), Positives = 125/304 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL--GNHKSAFDFYVIAAHLSPKDSA-L 104
G+ E+++ L+P+ +T + LA +L N K A Y A P + L
Sbjct: 194 GDMEKSLQFELIAAHLNPS--DTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYL 251
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRA-EPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
W++ + Q GD AM R+ + P D + LA A+SY +
Sbjct: 252 WERSSLYE-QMGDHKMAMDGYRRILNLLSPSDGERFMQLA---------RDMAKSYYEAN 301
Query: 164 KLFPDNVDATKTGAQLFLKC-GQTA-RSIGILEE-YLKVHPSDADLSVIDLLVAILMENN 220
D+ A + F K G + + I E Y+ D L VI I++E
Sbjct: 302 ----DSTSAINIIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIILEKE 357
Query: 221 AYEK-TLQHIEHAQIVRFSGKE-LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDH 278
E+ T + + A+ V S + +P+ + VK +C + L +E L L +N D
Sbjct: 358 TLEEGTSEENKAAETVTCSIPDSVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDM 417
Query: 279 ADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
DL +VA+ + +G NSAL L + + ++L+ AEC +L A +
Sbjct: 418 GDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYS 477
Query: 339 KALD 342
K +D
Sbjct: 478 KVVD 481
Score = 122 (48.0 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 61/304 (20%), Positives = 131/304 (43%)
Query: 389 PWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVC-ESLCVEALRQKVKVKRRLTKG-ILQ 446
P L+ +I + + + + G PE ++A+ P+ ++L +A + ++K L + +L
Sbjct: 484 PLHLDARISLSI--LQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLF 541
Query: 447 QRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQXXXXXXXXXXXXXXXXGVEWHS 506
+ K+Y L D++L + + LL A R ++ ++
Sbjct: 542 SQGKMYGYL--DTLLTML------AMLLKVAMNRAQVCLISSSKSGERHLYL---IKVSR 590
Query: 507 DDTDDESQQEAFREPP------LPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSM 560
D D ++QE L ++L ++ L++ L+ L R++EA +++ S+
Sbjct: 591 DKISDNNEQETSNYDAKAIFAVLTSVLPKDDWWNLLLKAIYTLSDLSRFQEAELLVDSSL 650
Query: 561 RLAYNILP-LEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSR 619
Y+ +K++EL G A + +D + ++ + WN + +V
Sbjct: 651 EY-YSFYDDRQKRKELEYFGLSAAILDKNFRKAYDYIRVMVMENVNKPQLWNIFNQVT-- 707
Query: 620 MGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENP 679
++S+ +H +F L K D +++GH ++ + A Y++A++ P P
Sbjct: 708 ---MHSQDVRHHRFCLRLMLKNPDNHALCVLNGHNAFVSGSFKHALGQYVQAFRAYPSEP 764
Query: 680 LINL 683
L NL
Sbjct: 765 LYNL 768
Score = 59 (25.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+G E+AAESY ++ L P ++DA + + L + G+ +++ LE
Sbjct: 466 LGYMERAAESYSKVVDLAPLHLDARISLSILQQQLGRPEKALEALE 511
Score = 48 (22.0 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 17/77 (22%), Positives = 31/77 (40%)
Query: 597 KYILQLHPYSLSAWNCYYKVLSRMGKI-----NSKHSKHSKFIRYLRAKYKD---CVPPI 648
KY+L+ H ++ ++ + LS G N H + +L Y +PPI
Sbjct: 781 KYVLKRHALTVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLTHLAIHYYQKALALPPI 840
Query: 649 IISGHQFTMASHHQDAA 665
++ G + +D A
Sbjct: 841 VVEGIEVDQLDLRRDIA 857
>UNIPROTKB|E1BPR9 [details] [associations]
symbol:GTF3C3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GO:GO:0000127 OMA:IHLAIHY GeneTree:ENSGT00390000016929
EMBL:DAAA02005500 EMBL:DAAA02005501 IPI:IPI00699952
Ensembl:ENSBTAT00000010228 Uniprot:E1BPR9
Length = 886
Score = 249 (92.7 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 51/198 (25%), Positives = 109/198 (55%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++GEA++++A G E+AI + E++R +P E ++TL + + G+ + + F +IAAH
Sbjct: 151 LMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAH 210
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L+P D+ W +L ++++ + QA++ +A++ EP ++ +S Y ++GD++ A
Sbjct: 211 LNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAM 270
Query: 157 ESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+ Y +I L P + + T+ A+ + + +I I+EE L H + +++
Sbjct: 271 DGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAISIIEEALSKHQGLVSMEDVNI 330
Query: 212 LVAILMENNAYEKTLQHI 229
+ + N Y++ L+ I
Sbjct: 331 AAELYISNKQYDRALEVI 348
Score = 127 (49.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 70/306 (22%), Positives = 123/306 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL--GNHKSAFDFYVIAAHLSPKDSA-L 104
G+ E+++ L+P+ +T + LA +L N K A Y A P + L
Sbjct: 196 GDMEKSLQFELIAAHLNPS--DTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYL 253
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRA-EPKD----ISLRIHLASFYVEIGDYEKAAESY 159
W++ + Q GD AM R+ + P D + L +A Y E D A
Sbjct: 254 WERSSLYE-QMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAISII 312
Query: 160 EQIQKLFPD--NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILM 217
E+ +++ A+L++ Q R++ ++ D S I +L
Sbjct: 313 EEALSKHQGLVSMEDVNIAAELYISNKQYDRALEVI----------TDFSGI-----VLE 357
Query: 218 ENNAYEKTLQHIEHAQIVRFSGKE-LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI 276
+ E T + + V + + +P+ + VK +C + L +E L L +N
Sbjct: 358 KRTTEEGTSEENKGGDNVICAIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPE 417
Query: 277 DHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMF 336
D DL +VA+ + +G NSAL L + + ++L+ AEC +L A
Sbjct: 418 DMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAES 477
Query: 337 FYKALD 342
+ K +D
Sbjct: 478 YSKVVD 483
Score = 115 (45.5 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 61/302 (20%), Positives = 129/302 (42%)
Query: 389 PWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVC-ESLCVEALRQKVKVKRRLTKG-ILQ 446
P L+ +I L + + G PE ++A+ P+ ++L +A + ++K L + +L
Sbjct: 486 PLHLDARI--SLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLQRSTLLF 543
Query: 447 QRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKI-QXXXXXXXXXXXXXXXXGVEWH 505
+ K+Y + D++L + + LL A R ++ +
Sbjct: 544 SQGKMYGYV--DTLLTML------AMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKI 595
Query: 506 SDDTDDESQQEAFRE--PPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLA 563
SD+ D ES + L ++L ++ L++ +L L R++EA +++ S+
Sbjct: 596 SDNNDQESANCDAKAIFAVLTSVLTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYC 655
Query: 564 --YNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMG 621
Y P K+ E L A + + + + + ++ + WN + +V
Sbjct: 656 SFYEDKPKRKELEYFGLSAAILDKNFRKAYNYISFRIMVMENVNKPQLWNIFNQVT---- 711
Query: 622 KINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLI 681
++S+ +H +F L K D +++GH ++ + R Y++A++ P+ PL
Sbjct: 712 -MHSQEVRHHRFCLRLMLKNPDNHALCVLNGHNAFVSGSFKHVIRQYVQAFRTHPQEPLY 770
Query: 682 NL 683
NL
Sbjct: 771 NL 772
Score = 61 (26.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+G E+AAESY ++ L P ++DA + + L + G+ +++ LE
Sbjct: 468 LGYMERAAESYSKVVDLAPLHLDARISLSTLQQQLGRPEKALEALE 513
>UNIPROTKB|E2QYG3 [details] [associations]
symbol:GTF3C3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GO:GO:0000127 KO:K15201 CTD:9330 OMA:IHLAIHY
GeneTree:ENSGT00390000016929 EMBL:AAEX03017978 EMBL:AAEX03017979
RefSeq:XP_536013.2 ProteinModelPortal:E2QYG3
Ensembl:ENSCAFT00000017063 GeneID:478851 KEGG:cfa:478851
NextBio:20854125 Uniprot:E2QYG3
Length = 883
Score = 244 (91.0 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 56/221 (25%), Positives = 116/221 (52%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++GEA++++A G E+AI + E++R +P E ++TL + + G+ + + F +IAAH
Sbjct: 150 LMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAH 209
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L+P D+ W +L ++++ + QA++ +A++ EP ++ +S Y ++GD++ A
Sbjct: 210 LNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAM 269
Query: 157 ESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+ Y +I L P + + + A+ + + +I I+EE H + +++
Sbjct: 270 DGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINIIEEAFSKHQGLVSMEDVNI 329
Query: 212 LVAILMENNAYEKTLQHI-EHAQIVRFSGKELPLKLKVKAG 251
+ + N Y+K L+ I + + IV E + KAG
Sbjct: 330 AAELYISNKHYDKALEVITDFSGIVLEKNAEEGTSEENKAG 370
Score = 145 (56.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 77/303 (25%), Positives = 124/303 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL--GNHKSAFDFYVIAAHLSPKDSA-L 104
G+ E+++ L+P+ +T + LA +L N K A Y A P + L
Sbjct: 195 GDMEKSLQFELIAAHLNPS--DTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYL 252
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRA-EPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
W++ + Q GD AM R+ + P D + LA A+SY +
Sbjct: 253 WERSSLYE-QMGDHKMAMDGYRRILNLLSPSDGERFMQLA---------RDMAKSYYEAN 302
Query: 164 KLFPDNVDATKTGAQLFLKC-GQTA-RSIGILEE-YLKVHPSDADLSVIDLLVAILMENN 220
D A + F K G + + I E Y+ D L VI I++E N
Sbjct: 303 ----DVTSAINIIEEAFSKHQGLVSMEDVNIAAELYISNKHYDKALEVITDFSGIVLEKN 358
Query: 221 AYEKTLQHIEHAQIVRFSGKE-LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHA 279
A E T + + + V S + +P+ + VK +C + L +E L L +N D
Sbjct: 359 AEEGTSEENKAGENVTCSIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMG 418
Query: 280 DLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYK 339
DL +VA+ + +G NSAL L + + ++L+ AEC +L A + K
Sbjct: 419 DLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGK 478
Query: 340 ALD 342
+D
Sbjct: 479 VVD 481
Score = 103 (41.3 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 36/181 (19%), Positives = 82/181 (45%)
Query: 506 SDDTDDESQQEAFRE--PPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLA 563
SD++D E+ + L ++L ++ L++ L L R++EA +++ S+
Sbjct: 594 SDNSDQETANCDAKAIFAVLTSVLTKDDWWNLLLKAIYCLCDLSRFQEAELLVDSSLEY- 652
Query: 564 YNILP-LEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGK 622
Y+ +K++EL G A + ++ + ++ + WN + +V
Sbjct: 653 YSFYDDKQKRKELEYFGLSAAILDKNFRKAYNYIRVMVMENVNKPQLWNIFNQVT----- 707
Query: 623 INSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLIN 682
++S+ +H +F L K + +++GH ++ + A Y++A++ P PL +
Sbjct: 708 MHSQEVRHHRFCLRLMLKNPENHALCVLNGHNAFVSGSFKHALGQYVQAFRTHPHEPLYS 767
Query: 683 L 683
L
Sbjct: 768 L 768
Score = 42 (19.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 16/77 (20%), Positives = 31/77 (40%)
Query: 597 KYILQLHPYSLSAWNCYYKVLSRMGKI-----NSKHSKHSKFIRYLRAKYKDC---VPPI 648
KY+L+ H ++ ++ + LS G N H + +L Y +PP+
Sbjct: 781 KYVLRRHALTVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLIHLAIHYYQKALDLPPL 840
Query: 649 IISGHQFTMASHHQDAA 665
++ G + +D A
Sbjct: 841 VVEGMEVDQLDLRRDIA 857
>UNIPROTKB|F1NEE6 [details] [associations]
symbol:GTF3C3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10 GO:GO:0000127
OMA:IHLAIHY GeneTree:ENSGT00390000016929 EMBL:AADN02019803
IPI:IPI00820400 Ensembl:ENSGALT00000039376 ArrayExpress:F1NEE6
Uniprot:F1NEE6
Length = 913
Score = 235 (87.8 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 54/219 (24%), Positives = 120/219 (54%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++GEA++++A G E+AI + E++R +P E ++TL + + G+ + + F +IAAH
Sbjct: 146 LMGEANIRFARGEREEAILMCMEIIRQAPLAHEPFSTLAMIYEDQGDMEKSLQFELIAAH 205
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L+P ++ W +L ++++ + QA++ +A++ +P ++ +S Y ++G+++ A
Sbjct: 206 LNPSNTEEWVRLAEMSLEQDNIKQAIFCYAKALKYDPTNVRYLWERSSLYEQLGEHKLAM 265
Query: 157 ESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+ Y +I L P + + + A+ + + A +I I+EE H S + +++
Sbjct: 266 DGYRRILNLLSPSDGERFMQLARDMAKSYYEANDAASAIEIIEEAFTKHQSLVSMEDVNI 325
Query: 212 LVAILMENNAYEKTLQHI-EHAQIV--RFSGKELPLKLK 247
+ + + Y+K L I ++A IV R + ++ P + K
Sbjct: 326 AAELYISSKQYDKALAVITDYAGIVLERKASEKSPAEEK 364
Score = 116 (45.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 79/314 (25%), Positives = 127/314 (40%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSP-NLPETYNTLGLAHSALGNHKSAFDFYV-IAA 95
L E SL+ N +QAI + ++ P N+ + L + LG HK A D Y I
Sbjct: 217 LAEMSLEQ--DNIKQAIFCYAKALKYDPTNVRYLWERSSL-YEQLGEHKLAMDGYRRILN 273
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA-EPKDISLRIHLASFYVEIGDYEK 154
LSP D + QL D A++ Y A A E + + H + V + D
Sbjct: 274 LLSPSDGERFMQLAR------DMAKSYYEANDAASAIEIIEEAFTKHQS--LVSMEDVNI 325
Query: 155 AAESYEQIQKLFPDNVDATKTG-AQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
AAE Y ++ D A T A + L+ + +S EE K + A + +
Sbjct: 326 AAELYISSKQY--DKALAVITDYAGIVLERKASEKSPA--EE--KKDDAAAVVETQESRE 379
Query: 214 AIL--MENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
A+ + E + +E G +P+ + VK +C + L +E L L
Sbjct: 380 AVTDNQSDPVAESSAAAVEKVSCCIPEG--VPIDITVKLMVCLVHLNILEPLNPLLTTLV 437
Query: 272 WKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLA---ECYLSLK 328
+N + DL +VA+ + +G NSAL L + + ++L+ A EC +L
Sbjct: 438 EQNPEEMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAVYLECLKALG 497
Query: 329 ERAHAIMFFYKALD 342
A + K +D
Sbjct: 498 HMERAAESYTKVVD 511
Score = 109 (43.4 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 34/162 (20%), Positives = 75/162 (46%)
Query: 523 LPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILP-LEKKEELRSLGAK 581
L ++L ++ L++ +L L RY+EA +++ S+ Y+ +K++EL G
Sbjct: 643 LTSVLTKDDWWNLLLKAIYSLCDLSRYKEAELLVDSSLEY-YSFYDDRQKRKELEYFGLS 701
Query: 582 MAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKY 641
A + ++ + ++ + WN + +V + S+ +H +F L K
Sbjct: 702 AAILDKNFRKAYNYIRIMVMENVNKPQLWNIFNQVT-----MQSQDVRHHRFCLRLMLKN 756
Query: 642 KDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
D +++GH ++ + A Y++A++ P+ PL +L
Sbjct: 757 PDNHALCVLNGHNAFVSGSFKHALGQYVQAFRANPDEPLYSL 798
Score = 64 (27.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+G E+AAESY ++ L P ++DA + + L + G+ +++ LE+
Sbjct: 496 LGHMERAAESYTKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEQ 542
Score = 38 (18.4 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 390 WW-LNEKIIMKLCHIYRAK 407
WW L K I LC + R K
Sbjct: 652 WWNLLLKAIYSLCDLSRYK 670
>UNIPROTKB|Q9Y5Q9 [details] [associations]
symbol:GTF3C3 "General transcription factor 3C polypeptide
3" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IC] [GO:0000127 "transcription factor
TFIIIC complex" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IC] [GO:0006383 "transcription from RNA polymerase III
promoter" evidence=IC;TAS] [GO:0042791 "5S class rRNA transcription
from RNA polymerase III type 1 promoter" evidence=IC] [GO:0042797
"tRNA transcription from RNA polymerase III promoter" evidence=IC]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0003677 EMBL:CH471063 Gene3D:1.25.40.10
Reactome:REACT_1788 EMBL:AC012486 GO:GO:0042797 GO:GO:0000127
eggNOG:NOG275814 KO:K15201 GO:GO:0042791 EMBL:AF133123
EMBL:AF465407 EMBL:AK027050 EMBL:AK314718 EMBL:BC015995
EMBL:BC043347 EMBL:AL137453 IPI:IPI00015806 IPI:IPI00411594
PIR:T46268 RefSeq:NP_001193703.1 RefSeq:NP_036218.1
UniGene:Hs.470996 UniGene:Hs.737375 ProteinModelPortal:Q9Y5Q9
SMR:Q9Y5Q9 IntAct:Q9Y5Q9 STRING:Q9Y5Q9 PhosphoSite:Q9Y5Q9
DMDM:47606223 PaxDb:Q9Y5Q9 PeptideAtlas:Q9Y5Q9 PRIDE:Q9Y5Q9
Ensembl:ENST00000263956 Ensembl:ENST00000409364 GeneID:9330
KEGG:hsa:9330 UCSC:uc002uts.3 UCSC:uc002utu.3 CTD:9330
GeneCards:GC02M197592 HGNC:HGNC:4666 MIM:604888 neXtProt:NX_Q9Y5Q9
PharmGKB:PA29054 HOVERGEN:HBG057124 InParanoid:Q9Y5Q9 OMA:IHLAIHY
OrthoDB:EOG4CJVGH PhylomeDB:Q9Y5Q9 GenomeRNAi:9330 NextBio:34947
ArrayExpress:Q9Y5Q9 Bgee:Q9Y5Q9 CleanEx:HS_GTF3C3
Genevestigator:Q9Y5Q9 GermOnline:ENSG00000119041 Uniprot:Q9Y5Q9
Length = 886
Score = 240 (89.5 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 49/198 (24%), Positives = 107/198 (54%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++GEA++++A G E+AI + E++R +P E ++TL + + G+ + + F +IAAH
Sbjct: 152 LMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAH 211
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L+P D+ W +L ++++ + QA++ +A++ EP ++ +S Y ++GD++ A
Sbjct: 212 LNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAM 271
Query: 157 ESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+ Y +I L P + + + A+ + + +I I++E H + +++
Sbjct: 272 DGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINIIDEAFSKHQGLVSMEDVNI 331
Query: 212 LVAILMENNAYEKTLQHI 229
+ + N Y+K L+ I
Sbjct: 332 AAELYISNKQYDKALEII 349
Score = 130 (50.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 72/308 (23%), Positives = 129/308 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL--GNHKSAFDFYVIAAHLSPKDSA-L 104
G+ E+++ L+P+ +T + LA +L N K A Y A P + L
Sbjct: 197 GDMEKSLQFELIAAHLNPS--DTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYL 254
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRA-EPKD----ISLRIHLASFYVEIGDYEKAA--- 156
W++ + Q GD AM R+ + P D + L +A Y E D A
Sbjct: 255 WERSSLYE-QMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINII 313
Query: 157 -ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
E++ + Q L +++ A+L++ Q +++ I+ D S I +
Sbjct: 314 DEAFSKHQGLV--SMEDVNIAAELYISNKQYDKALEII----------TDFSGI-----V 356
Query: 216 LMENNAYEKTLQHIEHAQIVRFSGKE-LPLKLKVKAGICYLRLGNMEKAEILFADLQWKN 274
L + + E T + + + V + + +P+ + VK +C + L +E L L +N
Sbjct: 357 LEKKTSEEGTSEENKAPENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQN 416
Query: 275 AIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAI 334
D DL +VA+ + +G NSAL L + + ++L+ AEC +L A
Sbjct: 417 PEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAA 476
Query: 335 MFFYKALD 342
+ K +D
Sbjct: 477 ESYGKVVD 484
Score = 103 (41.3 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 58/298 (19%), Positives = 128/298 (42%)
Query: 389 PWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVC-ESLCVEALRQKVKVKRRLTKG-ILQ 446
P L+ +I L + + G PE ++A+ P+ ++L +A + ++K L + +L
Sbjct: 487 PLHLDARI--SLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLF 544
Query: 447 QRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKI-QXXXXXXXXXXXXXXXXGVEWH 505
+ K+Y + D++L + + LL A R ++ +
Sbjct: 545 SQGKMYGYV--DTLLTML------AMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKI 596
Query: 506 SDDTDDESQQEAFRE--PPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLA 563
SD D ES + L ++L ++ L++ +L L R++EA +++ S+
Sbjct: 597 SDSNDQESANCDAKAIFAVLTSVLTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEY- 655
Query: 564 YNILP-LEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGK 622
Y+ +K++EL G A + ++ + ++ + WN + +V
Sbjct: 656 YSFYDDRQKRKELEYFGLSAAILDKNFRKAYNYIRIMVMENVNKPQLWNIFNQVT----- 710
Query: 623 INSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPL 680
++S+ +H +F L K + +++GH ++ + A Y++A++ P+ PL
Sbjct: 711 MHSQDVRHHRFCLRLMLKNPENHALCVLNGHNAFVSGSFKHALGQYVQAFRTHPDEPL 768
>POMBASE|SPCC16C4.14c [details] [associations]
symbol:sfc4 "transcription factor TFIIIC complex
subunit Sfc4" species:4896 "Schizosaccharomyces pombe" [GO:0000127
"transcription factor TFIIIC complex" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006384 "transcription initiation from RNA
polymerase III promoter" evidence=IDA] [GO:0000995 "core RNA
polymerase III binding transcription factor activity" evidence=IDA]
[GO:0043035 "chromatin insulator sequence binding" evidence=IDA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
PomBase:SPCC16C4.14c GO:GO:0005829 GO:GO:0006355 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003677 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 GO:GO:0006384 GO:GO:0000127
PIR:T41104 RefSeq:NP_587924.1 ProteinModelPortal:O74458
IntAct:O74458 STRING:O74458 EnsemblFungi:SPCC16C4.14c.1
GeneID:2539187 KEGG:spo:SPCC16C4.14c eggNOG:NOG275814 KO:K15201
OMA:KFFLRQL OrthoDB:EOG4R539Z NextBio:20800358 Uniprot:O74458
Length = 1006
Score = 156 (60.0 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 49/158 (31%), Positives = 80/158 (50%)
Query: 34 VTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
V +ML A+ +A GNF++A L +E+VR+ N+ + LG H GN + + +
Sbjct: 132 VQQMLSLANHLFAQEGNFDEAQKLAEEIVRIDNNVIAAWKMLGECHRQRGNGRVNIEKCL 191
Query: 93 IA----AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS-LRIHLASFYV 147
IA AHL PKD LW + QA Y +A+ A+P + S L+ ++ + V
Sbjct: 192 IAWMAAAHLKPKDHELWFTCAKLSESLEFWDQADYCYNRAVSAKPPNKSELKKYIWNRSV 251
Query: 148 ---EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK 182
E G +KAAE ++ + + P N K A++++K
Sbjct: 252 LNKEHGSLKKAAEGFKFLLQSSPYNASILKNLAEIYIK 289
Score = 106 (42.4 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI-DHA-DLITEVADTLMSLGHSNSAL 299
LP + K GI L+ G + +AE+ F+ + KN D+A ++ ++A M + + AL
Sbjct: 394 LPHLFRTKLGIARLKTGELPEAELHFSVI--KNLPPDYAWGMLYDIAKAYMDIERLDLAL 451
Query: 300 KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
+Y+ + + N L+ + CYL LKE HA
Sbjct: 452 EYFVLICNHEPAQNIGLWYNMGVCYLELKEYEHA 485
Score = 46 (21.3 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 251 GICYLRLGNMEKAE-----ILFADLQWKNAIDHADLITEVAD 287
G+CYL L E A+ IL D NA+ I E+ D
Sbjct: 473 GVCYLELKEYEHAQQCMEAILIVDNSNTNALIKLAEINELQD 514
Score = 40 (19.1 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 648 IIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
+++ GH A Y A+ + P+ P+ NL
Sbjct: 844 VLLYGHIMARNRSWIPAINYYSRAFAINPDCPITNL 879
>CGD|CAL0004061 [details] [associations]
symbol:TFC4 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0000127 "transcription factor TFIIIC
complex" evidence=IEA] [GO:0001041 "transcription from a RNA
polymerase III hybrid type promoter" evidence=IEA] [GO:0042791 "5S
class rRNA transcription from RNA polymerase III type 1 promoter"
evidence=IEA] [GO:0006384 "transcription initiation from RNA
polymerase III promoter" evidence=IEA] [GO:0001009 "transcription
from RNA polymerase III type 2 promoter" evidence=IEA] [GO:0001005
"RNA polymerase III type 1 promoter sequence-specific DNA binding
TFIIIB recruiting transcription factor activity" evidence=IEA]
[GO:0001002 "RNA polymerase III type 1 promoter sequence-specific
DNA binding" evidence=IEA] [GO:0043035 "chromatin insulator
sequence binding" evidence=IEA] [GO:0001008 "RNA polymerase III
type 2 promoter sequence-specific DNA binding TFIIIB recruiting
transcription factor activity" evidence=IEA] [GO:0001003 "RNA
polymerase III type 2 promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000995 "core RNA polymerase III binding
transcription factor activity" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13176 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 CGD:CAL0004061 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 EMBL:AACQ01000027 eggNOG:NOG275814 KO:K15201
RefSeq:XP_719972.1 ProteinModelPortal:Q5AEJ4 STRING:Q5AEJ4
GeneID:3638420 KEGG:cal:CaO19.274 Uniprot:Q5AEJ4
Length = 1057
Score = 156 (60.0 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 46/212 (21%), Positives = 99/212 (46%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P V L +A+ + + + A L EV++ P Y LG A G +++
Sbjct: 186 PEVRSNLSQANEAFVRKDLQVAQQLYLEVIKKDPKNFSAYKALGEISKAQGQLNECCNYW 245
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PKDISLRIHLASFYVEIG 150
++AA++ P D+ W Q+ + + G QA+Y +AI + K + A Y E
Sbjct: 246 LLAANIHPWDTEFWGQVAQLSAELGHIDQAVYCYGRAITPDIAKSCEFILQRAILYQERK 305
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL--KVHPSDA---- 204
Y KA + ++++++L+P + + K A ++ + + +I + + L +HP
Sbjct: 306 QYGKALDGFQKVRQLYPKDSNIIKYLASVYSEQKRLNDAINLYMKVLDSNIHPERESNEL 365
Query: 205 ----DLSVIDLLVAILMENNAYEKTLQHIEHA 232
D + +++L+ + ++N+++ L ++ A
Sbjct: 366 YPKFDWAELNILLELHLQNHSWRMGLNVLKLA 397
Score = 78 (32.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 32/111 (28%), Positives = 48/111 (43%)
Query: 241 ELPLKLKVKAGICYLRLGNMEK-AEILFADLQWKNAIDHADLITEVADTLMSLGHSNSAL 299
+LP+ ++ K G C LRLG +K + D + D +DL E L GH AL
Sbjct: 445 DLPIDIRFKLG-C-LRLGLQQKDVAVQHFDYLLEEQ-DVSDLHFEAGKLLEEHGHYEDAL 501
Query: 300 KYYHFL-ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
K+ E T + L LA+CY + + + + L DN+D
Sbjct: 502 KFLSKASEDEEFTISLELVQLLAKCYFEVGDYHESKQAYETLLQHDPDNLD 552
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 271 QWKNAIDHADLITEVA 286
+++N ID+AD I ++A
Sbjct: 764 RYENNIDYADEIVDIA 779
Score = 37 (18.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 650 ISGHQFTMASHHQDAARCYLEAYKLLPEN 678
++ F QD + + EA KLL E+
Sbjct: 466 VAVQHFDYLLEEQDVSDLHFEAGKLLEEH 494
>ASPGD|ASPL0000055827 [details] [associations]
symbol:AN0407 species:162425 "Emericella nidulans"
[GO:0006384 "transcription initiation from RNA polymerase III
promoter" evidence=IEA] [GO:0043035 "chromatin insulator sequence
binding" evidence=IEA] [GO:0000995 "core RNA polymerase III binding
transcription factor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:BN001308 EMBL:AACD01000007 Gene3D:1.25.40.10 eggNOG:NOG275814
KO:K15201 OMA:KFFLRQL RefSeq:XP_658011.1 ProteinModelPortal:Q5BGC3
EnsemblFungi:CADANIAT00002292 GeneID:2876183 KEGG:ani:AN0407.2
HOGENOM:HOG000211033 OrthoDB:EOG441TKZ Uniprot:Q5BGC3
Length = 1077
Score = 146 (56.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 36 KML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
K+L EA+ + G++++AI L++ ++++P + ++ L A G + A
Sbjct: 154 KLLHSEATSAFIDGDYDRAIDLVRRAIQVNPEMFAAHSLLSEIFLAQGEKEKAVTALFSG 213
Query: 95 AHLSPKDSALWKQLLTFAV-QKGDTAQA-----MYYIRQAIRAEPKDISLRIHLASFYVE 148
AH P+D+ +W ++ Q GD QA +Y + + +P++ + R A+ Y
Sbjct: 214 AHTRPRDTTVWLKVARMITEQAGDDRQAVLNDVLYCYSRVLEIDPQNHNTRFQRAALYRG 273
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATK 174
+G +A YE+I + P NV A +
Sbjct: 274 LGHNGRAVTEYERILRDLPHNVRALR 299
Score = 95 (38.5 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 34/153 (22%), Positives = 66/153 (43%)
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
G++ A D A ++P+ A L + +G+ +A+ + P+D ++ +
Sbjct: 167 GDYDRAIDLVRRAIQVNPEMFAAHSLLSEIFLAQGEKEKAVTALFSGAHTRPRDTTVWLK 226
Query: 142 LASFYVE-IGDYEKAAES-----YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+A E GD +A + Y ++ ++ P N + A L+ G R++ E
Sbjct: 227 VARMITEQAGDDRQAVLNDVLYCYSRVLEIDPQNHNTRFQRAALYRGLGHNGRAVTEYER 286
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
L+ P + + + LL L E N Y+K L +
Sbjct: 287 ILRDLPHN--VRALRLLTDTLSEQNQYQKALDY 317
Score = 87 (35.7 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 29/120 (24%), Positives = 49/120 (40%)
Query: 239 GKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKN---------AIDHADLITEVADTL 289
G LPL+ ++K G+ L+L E L +W D+ DL E AD L
Sbjct: 412 GPGLPLEFRIKLGLFRLKLPERHINEALH-HFRWLKPEDTSDGSLVYDYGDLFREAADAL 470
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
AL++Y ++ D + ++ + +C+ SL E A + + NI+
Sbjct: 471 KDAEMFEDALRFYRPIQKTEYADVSF-FMAMGDCFKSLGELEDAENCYLTVAEHDTSNIE 529
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 648 IIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
+++ GH + A + AY L +NP + L
Sbjct: 867 LVLYGHILYSGNSFYPALNYFFRAYALDDKNPAVLL 902
>MGI|MGI:3039590 [details] [associations]
symbol:Tmtc1 "transmembrane and tetratricopeptide repeat
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:3039590 GO:GO:0016021 GO:GO:0005739 eggNOG:COG0457
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
CTD:83857 HOVERGEN:HBG106148 OrthoDB:EOG41C6VN EMBL:AK046396
EMBL:AK137545 EMBL:AC126683 EMBL:AC142274 IPI:IPI00653264
IPI:IPI01007647 RefSeq:NP_945318.2 UniGene:Mm.137858
ProteinModelPortal:Q3UV71 SMR:Q3UV71 STRING:Q3UV71
PhosphoSite:Q3UV71 PRIDE:Q3UV71 Ensembl:ENSMUST00000060095
Ensembl:ENSMUST00000100772 GeneID:387314 KEGG:mmu:387314
UCSC:uc009eti.2 UCSC:uc009etj.2 HOGENOM:HOG000067906
InParanoid:Q3UV71 OMA:RLYPRHA NextBio:405818 Bgee:Q3UV71
Genevestigator:Q3UV71 Uniprot:Q3UV71
Length = 942
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 625 EEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAV 684
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ KA E Y + K+
Sbjct: 685 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAE 744
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS +L + + ++A++ + EK HI
Sbjct: 745 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHI 803
>TAIR|locus:2103025 [details] [associations]
symbol:SEC "secret agent" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006493 "protein
O-linked glycosylation" evidence=ISS;IDA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS;IDA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 UniPathway:UPA00378 GO:GO:0007275 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016757 GO:GO:0006493
Gene3D:1.25.40.10 EMBL:AC016829 CAZy:GT41 eggNOG:COG3914
HOGENOM:HOG000003765 KO:K09667 OMA:LAYMPNT EMBL:AF441079
EMBL:AY090938 EMBL:AY117340 IPI:IPI00524518 RefSeq:NP_187074.1
UniGene:At.27850 UniGene:At.71305 ProteinModelPortal:Q9M8Y0
SMR:Q9M8Y0 IntAct:Q9M8Y0 STRING:Q9M8Y0 PaxDb:Q9M8Y0 PRIDE:Q9M8Y0
EnsemblPlants:AT3G04240.1 GeneID:819579 KEGG:ath:AT3G04240
TAIR:At3g04240 InParanoid:Q9M8Y0 PhylomeDB:Q9M8Y0
ProtClustDB:CLSN2684273 Genevestigator:Q9M8Y0 GermOnline:AT3G04240
Uniprot:Q9M8Y0
Length = 977
Score = 152 (58.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 58/266 (21%), Positives = 111/266 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L G+ +A+ KE V+L P P+ Y LG + ALG A Y A + P
Sbjct: 230 AGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPN 289
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + + ++G A+ + +QA+ +P+ + +L + +IG ++A Y
Sbjct: 290 SAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYN 349
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMEN 219
Q L P++ A ++++ + + + L V LS + L I +
Sbjct: 350 QCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAV---TTGLSAPFNNLAIIYKQQ 406
Query: 220 NAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA--EILFA-DLQWKNAI 276
Y + + +++R L V G Y +G + +A + + A + + A
Sbjct: 407 GNYSDAISC--YNEVLRID--PLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAE 462
Query: 277 DHADLITEVADTLMSLGHSNSALKYY 302
HA+L + D+ GH +A+ Y
Sbjct: 463 AHANLASAYKDS----GHVEAAITSY 484
Score = 149 (57.5 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 45/191 (23%), Positives = 86/191 (45%)
Query: 42 SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD 101
++ Y ++ I+ +E +R+ P E Y + A G+ A +Y+IA L P
Sbjct: 95 AIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNF 154
Query: 102 SALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ 161
+ W L + ++KG ++A +QA+ P + +L + G +A Y +
Sbjct: 155 ADAWSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLE 214
Query: 162 IQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILMEN 219
++ P A A LF++ G R++ +E +K+ P+ DA L++ ++ A+
Sbjct: 215 AVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPT 274
Query: 220 NA---YEKTLQ 227
A Y+ LQ
Sbjct: 275 EAIMCYQHALQ 285
Score = 138 (53.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 36/161 (22%), Positives = 73/161 (45%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS G +A ++ + L+P L + ++ LG A G A+ Y+ A + P
Sbjct: 162 ASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPT 221
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L ++ GD +A+ Y ++A++ +P ++L + Y +G +A Y+
Sbjct: 222 FAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQ 281
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++ P++ A A ++ + GQ +I ++ L P
Sbjct: 282 HALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDP 322
Score = 122 (48.0 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 53/219 (24%), Positives = 90/219 (41%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G+F+QA+ V + +P + +G + L + A + P+ +
Sbjct: 64 YKGGDFKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAEC 123
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + +KGDT +A+ Y AI P +LAS Y+ G +A + +Q
Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALS 183
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P VDA L G + E +++ P+ A ++ +L + ME+ +
Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFA-IAWSNL-AGLFMESGDLNR 241
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
LQ+ + A +KLK YL LGN+ KA
Sbjct: 242 ALQYYKEA-----------VKLKPAFPDAYLNLGNVYKA 269
Score = 61 (26.5 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 23/95 (24%), Positives = 39/95 (41%)
Query: 589 PNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINS--KHSKH--SKFIRYLRAKYKDC 644
P C ++ LQ+ P S A+ + G+++ +H K S+ R+L A Y +
Sbjct: 273 PTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEA-YNNL 331
Query: 645 VPPIIISGHQFTMASHHQDAARCYLEAYKLLPENP 679
G+ +A RCY + L P +P
Sbjct: 332 -------GNALKDIGRVDEAVRCYNQCLALQPNHP 359
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 33/147 (22%), Positives = 58/147 (39%)
Query: 543 LASLQRYEEASEIINLSMRLAYNILPLEKK--EELRSLGAKMAYDSTDPNHGFDCAKYIL 600
+AS+ YE+ ++L++R L + + E +LG + D + C L
Sbjct: 297 IASIY-YEQGQ--LDLAIRHYKQALSRDPRFLEAYNNLGNALK-DIGRVDEAVRCYNQCL 352
Query: 601 QL---HPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTM 657
L HP +++ Y + MG +S L A + + II Q
Sbjct: 353 ALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLA---IIYKQQ--- 406
Query: 658 ASHHQDAARCYLEAYKLLP--ENPLIN 682
++ DA CY E ++ P + L+N
Sbjct: 407 -GNYSDAISCYNEVLRIDPLAADALVN 432
>UNIPROTKB|Q747S4 [details] [associations]
symbol:GSU3191 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_954232.1
ProteinModelPortal:Q747S4 GeneID:2688377 KEGG:gsu:GSU3191
PATRIC:22029237 HOGENOM:HOG000129399 OMA:THTRAWI
ProtClustDB:CLSK829148 BioCyc:GSUL243231:GH27-3141-MONOMER
Uniprot:Q747S4
Length = 638
Score = 154 (59.3 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 51/177 (28%), Positives = 89/177 (50%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+QA++ +E +R+ P+ P+ +LGLA A G+ A + L+ + Q L
Sbjct: 78 FDQAVTEYRETLRMDPSFPDAQGSLGLALLAKGSADEAV--VELTRALAEDSKPRYHQGL 135
Query: 110 --TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
FA ++ + A+Y+ +A+R P D S+R+ LA Y + G E+A + ++ + P
Sbjct: 136 GKIFA-ERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAP 194
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
N +A A L+L G+T ++ L++ +P + I LL+A AYEK
Sbjct: 195 ANENARLALASLYLADGRTEGAVQELKQAQLANPGNRG---IHLLLA-----EAYEK 243
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 62/270 (22%), Positives = 120/270 (44%)
Query: 32 PGVTKMLGEAS-LQYAYGNFEQAISLLKEVVRLSP-NLPETYNTLGLAHSALGNHKSAFD 89
PG ++L + S Q A G + AI+ +E++R+ P N YN LG+ + G A
Sbjct: 296 PGSAEVLHKLSGAQAAAGLDDDAIASYRELLRVKPGNAANHYN-LGIIYERKGLIDEAVV 354
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
Y A LS + ++L +G QA+ R+ ++ + L + LA ++
Sbjct: 355 EYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSNPVLHLKLARGFMSS 414
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
+ + A SY + KL PDN++A + A ++ K Q + E L++ DA+
Sbjct: 415 KNTKDAIASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEAR-- 472
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
++L AI ++ Y++ + ++ V + + K+ G+ + + + AE+ +
Sbjct: 473 NILTAIYVKEKKYDELVPLLQEG--VELAPNDAMSHYKL--GLIHEFRKDYDSAEVSYRK 528
Query: 270 L-QWKNAIDHADLITEVADTLMSLGHSNSA 298
+ K+ DHA + + + G A
Sbjct: 529 ATELKD--DHAKALNALGRIYLKTGKLTEA 556
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 75/322 (23%), Positives = 133/322 (41%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
G+ K+ E SL Y+ + A E +R P+ P L + G + A
Sbjct: 134 GLGKIFAERSL-YSLALYHYA-----EALRELPDDPSIRVDLAQVYRQAGKKEEAEKELK 187
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
A ++P + L + + G T A+ ++QA A P + + + LA Y ++GD
Sbjct: 188 KALTVAPANENARLALASLYLADGRTEGAVQELKQAQLANPGNRGIHLLLAEAYEKLGD- 246
Query: 153 EKAAESYEQI----QK-LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
KAAE YE Q+ + P+ + + G + + + +++ LK P A+
Sbjct: 247 RKAAE-YEYTLSGRQRGVLPE--EYLRRGDER-MAAKEFPKAVEEYRAALKERPGSAE-- 300
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
V+ L + + + +++R + GI Y R G +++A + +
Sbjct: 301 VLHKLSGAQAAAGLDDDAIA--SYRELLRVKPGNAANHYNL--GIIYERKGLIDEAVVEY 356
Query: 268 ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSL 327
+A +H D +AD G A++ Y L G N L+LKLA ++S
Sbjct: 357 KQAVRLSA-EHGDARRRLADIYTLRGSHPQAIEQYREL-LKRGDSNPVLHLKLARGFMSS 414
Query: 328 KERAHAIMFFYKALDRFEDNID 349
K AI + +AL DN++
Sbjct: 415 KNTKDAIASYNEALKLDPDNLE 436
Score = 51 (23.0 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 619 RMGKINSKHSKHSKFIRYLRAKYK--DCVPPIIIS-GHQFTMASHHQDAARCYLEAYKLL 675
R+ I + H + I R K D P + + F + + +DA Y EA KL
Sbjct: 372 RLADIYTLRGSHPQAIEQYRELLKRGDSNPVLHLKLARGFMSSKNTKDAIASYNEALKLD 431
Query: 676 PEN 678
P+N
Sbjct: 432 PDN 434
Score = 49 (22.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 616 VLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLL 675
+ R G I+ ++ + +R L A++ D + +T+ H A Y E K
Sbjct: 342 IYERKGLIDEAVVEYKQAVR-LSAEHGDARRRL---ADIYTLRGSHPQAIEQYRELLKRG 397
Query: 676 PENPLINLK 684
NP+++LK
Sbjct: 398 DSNPVLHLK 406
>TIGR_CMR|GSU_3191 [details] [associations]
symbol:GSU_3191 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_954232.1
ProteinModelPortal:Q747S4 GeneID:2688377 KEGG:gsu:GSU3191
PATRIC:22029237 HOGENOM:HOG000129399 OMA:THTRAWI
ProtClustDB:CLSK829148 BioCyc:GSUL243231:GH27-3141-MONOMER
Uniprot:Q747S4
Length = 638
Score = 154 (59.3 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 51/177 (28%), Positives = 89/177 (50%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+QA++ +E +R+ P+ P+ +LGLA A G+ A + L+ + Q L
Sbjct: 78 FDQAVTEYRETLRMDPSFPDAQGSLGLALLAKGSADEAV--VELTRALAEDSKPRYHQGL 135
Query: 110 --TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
FA ++ + A+Y+ +A+R P D S+R+ LA Y + G E+A + ++ + P
Sbjct: 136 GKIFA-ERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAP 194
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
N +A A L+L G+T ++ L++ +P + I LL+A AYEK
Sbjct: 195 ANENARLALASLYLADGRTEGAVQELKQAQLANPGNRG---IHLLLA-----EAYEK 243
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 62/270 (22%), Positives = 120/270 (44%)
Query: 32 PGVTKMLGEAS-LQYAYGNFEQAISLLKEVVRLSP-NLPETYNTLGLAHSALGNHKSAFD 89
PG ++L + S Q A G + AI+ +E++R+ P N YN LG+ + G A
Sbjct: 296 PGSAEVLHKLSGAQAAAGLDDDAIASYRELLRVKPGNAANHYN-LGIIYERKGLIDEAVV 354
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
Y A LS + ++L +G QA+ R+ ++ + L + LA ++
Sbjct: 355 EYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSNPVLHLKLARGFMSS 414
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
+ + A SY + KL PDN++A + A ++ K Q + E L++ DA+
Sbjct: 415 KNTKDAIASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEAR-- 472
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
++L AI ++ Y++ + ++ V + + K+ G+ + + + AE+ +
Sbjct: 473 NILTAIYVKEKKYDELVPLLQEG--VELAPNDAMSHYKL--GLIHEFRKDYDSAEVSYRK 528
Query: 270 L-QWKNAIDHADLITEVADTLMSLGHSNSA 298
+ K+ DHA + + + G A
Sbjct: 529 ATELKD--DHAKALNALGRIYLKTGKLTEA 556
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 75/322 (23%), Positives = 133/322 (41%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
G+ K+ E SL Y+ + A E +R P+ P L + G + A
Sbjct: 134 GLGKIFAERSL-YSLALYHYA-----EALRELPDDPSIRVDLAQVYRQAGKKEEAEKELK 187
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
A ++P + L + + G T A+ ++QA A P + + + LA Y ++GD
Sbjct: 188 KALTVAPANENARLALASLYLADGRTEGAVQELKQAQLANPGNRGIHLLLAEAYEKLGD- 246
Query: 153 EKAAESYEQI----QK-LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
KAAE YE Q+ + P+ + + G + + + +++ LK P A+
Sbjct: 247 RKAAE-YEYTLSGRQRGVLPE--EYLRRGDER-MAAKEFPKAVEEYRAALKERPGSAE-- 300
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
V+ L + + + +++R + GI Y R G +++A + +
Sbjct: 301 VLHKLSGAQAAAGLDDDAIA--SYRELLRVKPGNAANHYNL--GIIYERKGLIDEAVVEY 356
Query: 268 ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSL 327
+A +H D +AD G A++ Y L G N L+LKLA ++S
Sbjct: 357 KQAVRLSA-EHGDARRRLADIYTLRGSHPQAIEQYREL-LKRGDSNPVLHLKLARGFMSS 414
Query: 328 KERAHAIMFFYKALDRFEDNID 349
K AI + +AL DN++
Sbjct: 415 KNTKDAIASYNEALKLDPDNLE 436
Score = 51 (23.0 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 619 RMGKINSKHSKHSKFIRYLRAKYK--DCVPPIIIS-GHQFTMASHHQDAARCYLEAYKLL 675
R+ I + H + I R K D P + + F + + +DA Y EA KL
Sbjct: 372 RLADIYTLRGSHPQAIEQYRELLKRGDSNPVLHLKLARGFMSSKNTKDAIASYNEALKLD 431
Query: 676 PEN 678
P+N
Sbjct: 432 PDN 434
Score = 49 (22.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 616 VLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLL 675
+ R G I+ ++ + +R L A++ D + +T+ H A Y E K
Sbjct: 342 IYERKGLIDEAVVEYKQAVR-LSAEHGDARRRL---ADIYTLRGSHPQAIEQYRELLKRG 397
Query: 676 PENPLINLK 684
NP+++LK
Sbjct: 398 DSNPVLHLK 406
>SGD|S000003279 [details] [associations]
symbol:TFC4 "Subunit of TFIIIC RNA pol III transcription
initiation factor complex" species:4932 "Saccharomyces cerevisiae"
[GO:0001002 "RNA polymerase III type 1 promoter sequence-specific
DNA binding" evidence=IDA] [GO:0001005 "RNA polymerase III type 1
promoter sequence-specific DNA binding TFIIIB recruiting
transcription factor activity" evidence=IDA] [GO:0001009
"transcription from RNA polymerase III type 2 promoter"
evidence=IMP;IDA] [GO:0000127 "transcription factor TFIIIC complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0001041
"transcription from a RNA polymerase III hybrid type promoter"
evidence=IDA] [GO:0042791 "5S class rRNA transcription from RNA
polymerase III type 1 promoter" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008301 "DNA binding, bending"
evidence=IDA] [GO:0001003 "RNA polymerase III type 2 promoter
sequence-specific DNA binding" evidence=IDA] [GO:0001008 "RNA
polymerase III type 2 promoter sequence-specific DNA binding TFIIIB
recruiting transcription factor activity" evidence=IDA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13174 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SGD:S000003279 GO:GO:0006355 EMBL:BK006941 GO:GO:0003677
Gene3D:1.25.40.10 RefSeq:NP_011561.3 GeneID:852938 KEGG:sce:YGR047C
KO:K15026 EMBL:DQ115391 RefSeq:NP_011568.3 GeneID:852945
KEGG:sce:YGR054W Reactome:REACT_83470 Reactome:REACT_87991
GO:GO:0000127 eggNOG:NOG275814 KO:K15201 OMA:KFFLRQL
OrthoDB:EOG4R539Z GO:GO:0000999 GO:GO:0001021 GO:GO:0001041
EMBL:L12722 EMBL:Z72832 EMBL:Z72833 PIR:A47453
ProteinModelPortal:P33339 SMR:P33339 DIP:DIP-230N IntAct:P33339
MINT:MINT-402608 STRING:P33339 PaxDb:P33339 PRIDE:P33339
EnsemblFungi:YGR047C CYGD:YGR047c GeneTree:ENSGT00390000016929
HOGENOM:HOG000248222 NextBio:972675 Genevestigator:P33339
GermOnline:YGR047C Uniprot:P33339
Length = 1025
Score = 129 (50.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 42/188 (22%), Positives = 82/188 (43%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P V ++L +A+ + + + A L EV++ Y TLG + G + +
Sbjct: 126 PEVAQLLSQANEAFVRNDLQVAERLFNEVIKKDARNFAAYETLGDIYQLQGRLNDCCNSW 185
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
+AAHL+ D WK + + QA+Y + I P + + Y + G
Sbjct: 186 FLAAHLNASDWEFWKIVAILSADLDHVRQAIYCFSRVISLNPMEWESIYRRSMLYKKTGQ 245
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+A + ++++ P + + + A L++ + SI E Y+KV +A++ +
Sbjct: 246 LARALDGFQRLYMYNPYDANILRELAILYVDYDRIEDSI---ELYMKVF--NANVERREA 300
Query: 212 LVAILMEN 219
++A L EN
Sbjct: 301 ILAAL-EN 307
Score = 77 (32.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
+P+ ++V+ G+ L N+ +A F L + D ADL E A L A+ +
Sbjct: 430 IPIDIRVRLGLLRLNTDNLVEALNHFQCLYDETFSDVADLYFEAATALTRAEKYKEAIDF 489
Query: 302 YH---FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ LE TD ++ LA CY ++ A F+ A+ D++D
Sbjct: 490 FTPLLSLEEWRTTD---VFKPLARCYKEIESYETAKEFYELAIKSEPDDLD 537
>UNIPROTKB|F1N5E9 [details] [associations]
symbol:TMTC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005739 Gene3D:1.25.40.10
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
OMA:RLYPRHA EMBL:DAAA02013961 EMBL:DAAA02013962 EMBL:DAAA02013963
EMBL:DAAA02013964 EMBL:DAAA02013965 EMBL:DAAA02013966
IPI:IPI00706299 UniGene:Bt.45401 ProteinModelPortal:F1N5E9
Ensembl:ENSBTAT00000007064 NextBio:20875950 Uniprot:F1N5E9
Length = 939
Score = 153 (58.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 43/180 (23%), Positives = 81/180 (45%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y+ P S L
Sbjct: 622 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYLAGIKKCPDSSDLHNNYGV 681
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +GD A E Y++ ++
Sbjct: 682 FLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKTE 741
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ E + + PS +L + + ++A++ + EK HI
Sbjct: 742 ILSPLGA-LYYNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSHI 800
>UNIPROTKB|P73091 [details] [associations]
symbol:slr2048 "Slr2048 protein" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IDA]
InterPro:IPR001440 InterPro:IPR011717 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF07721
Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0030288 eggNOG:COG0457 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 EMBL:BA000022 GenomeReviews:BA000022_GR PIR:S75202
RefSeq:NP_440436.1 RefSeq:YP_005650494.1 ProteinModelPortal:P73091
IntAct:P73091 STRING:P73091 GeneID:12256184 GeneID:953736
KEGG:syn:slr2048 KEGG:syy:SYNGTS_0541 PATRIC:23838034 OMA:HAKSELM
ProtClustDB:CLSK892674 Uniprot:P73091
Length = 398
Score = 147 (56.8 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 67/290 (23%), Positives = 125/290 (43%)
Query: 36 KMLGEASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
++ G YA G F +A ++ +R++PN P+ Y+ LG +++ G A Y A
Sbjct: 109 ELFGSMGYLYARQGQFAEASRSFQQALRVNPNNPDYYDGLGFSYARQGLLNEAASAYATA 168
Query: 95 AHLSP--KDSALWKQLL-TFAVQKGD--TAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
L P ++S ++ L +Q+GD + +Y +++++ ++ ++ + A ++
Sbjct: 169 ISLGPSSRESVKYRLALGIIMLQQGDYNRVRQLYNEIHSLQSDNEEAAVMMGAA--LLQS 226
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
+YE+ Q +LFP+ + T + +L G + LE +++P S+
Sbjct: 227 SEYEQLITFNNQALRLFPNRSELTLQLGKAYLAQGDLVAARRALEP--RLNPDWRSFSLY 284
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
+L + L + Q +R + + K+ G YL L N +A +F D
Sbjct: 285 LTWAELLEREGNFAGALD--AYKQALR--NEPTAIAAKIGTGRMYLELDNPAEAVWVFRD 340
Query: 270 L---QWKNAIDHADLITEV--ADTLMSLGHSN--SALKYYHFLETNAGTD 312
L Q NA D L+ E D + L + A K Y AG+D
Sbjct: 341 LTRLQPSNA-DFYYLLGEAYAVDEKIDLAKKSFGEAKKLYQAQGNTAGSD 389
Score = 118 (46.6 bits), Expect = 0.00075, P = 0.00075
Identities = 38/165 (23%), Positives = 75/165 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GNF QAI++ ++ L E + ++G ++ G A + A ++P + +
Sbjct: 88 GNFPQAIAIYQQAAMLDGENAELFGSMGYLYARQGQFAEASRSFQQALRVNPNNPDYYDG 147
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEP---KDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L ++G +A AI P + + R+ L ++ GDY + + Y +I
Sbjct: 148 LGFSYARQGLLNEAASAYATAISLGPSSRESVKYRLALGIIMLQQGDYNRVRQLYNEIHS 207
Query: 165 LFPDNVDAT-KTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
L DN +A GA L L+ + + I + L++ P+ ++L++
Sbjct: 208 LQSDNEEAAVMMGAAL-LQSSEYEQLITFNNQALRLFPNRSELTL 251
>RGD|1564868 [details] [associations]
symbol:Tmtc1 "transmembrane and tetratricopeptide repeat
containing 1" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=ISO] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
RGD:1564868 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
IPI:IPI00949555 ProteinModelPortal:D4A9Y4
Ensembl:ENSRNOT00000002535 UCSC:RGD:1564868 ArrayExpress:D4A9Y4
Uniprot:D4A9Y4
Length = 905
Score = 152 (58.6 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 588 EEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNNYAV 647
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L + +G+ A E Y + ++
Sbjct: 648 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAE 707
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS DL + + ++A++ + EK HI
Sbjct: 708 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHI 766
>UNIPROTKB|Q74DZ8 [details] [associations]
symbol:GSU1166 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_952219.1
ProteinModelPortal:Q74DZ8 GeneID:2688393 KEGG:gsu:GSU1166
PATRIC:22025104 HOGENOM:HOG000133252 OMA:NERESAC
ProtClustDB:CLSK828223 BioCyc:GSUL243231:GH27-1145-MONOMER
Uniprot:Q74DZ8
Length = 266
Score = 141 (54.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 42/179 (23%), Positives = 80/179 (44%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG+ L+ A E A++ + V L P + Y +GL +++L A + + A +
Sbjct: 79 LGDICLELA--EHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEETSKAIEAFEKALEI 136
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P + + L G+ +A+ R+ I +P D + +L Y ++G+ E+A +
Sbjct: 137 DPANVFAYNGLGDAWYGLGEREKAIDAFRKGIELDPTDAAAHFNLGELYYDLGETEEAEK 196
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL 216
+ +L PD + T L++ + +I LE YL+ S +D + A+L
Sbjct: 197 ECLEAVRLDPDFTMSYLTLGSLYMDDERVKDAIRYLELYLQKEKSPQARETVDEVKAVL 255
Score = 114 (45.2 bits), Expect = 0.00094, P = 0.00094
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F A ++ + V +P+ PE Y LG A G A Y L+P D
Sbjct: 19 GDFTAAEAMFRTCVERAPDDPEGYFYLGEALVEEGKLAEARQQYEKGLALAPGDVDGQIA 78
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ + A+ R+A+ +P++ +++ Y + + KA E++E+ ++ P
Sbjct: 79 LGDICLELAEHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEETSKAIEAFEKALEIDP 138
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
NV A + G+ ++I + +++ P+DA
Sbjct: 139 ANVFAYNGLGDAWYGLGEREKAIDAFRKGIELDPTDA 175
>TIGR_CMR|GSU_1166 [details] [associations]
symbol:GSU_1166 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_952219.1
ProteinModelPortal:Q74DZ8 GeneID:2688393 KEGG:gsu:GSU1166
PATRIC:22025104 HOGENOM:HOG000133252 OMA:NERESAC
ProtClustDB:CLSK828223 BioCyc:GSUL243231:GH27-1145-MONOMER
Uniprot:Q74DZ8
Length = 266
Score = 141 (54.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 42/179 (23%), Positives = 80/179 (44%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG+ L+ A E A++ + V L P + Y +GL +++L A + + A +
Sbjct: 79 LGDICLELA--EHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEETSKAIEAFEKALEI 136
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P + + L G+ +A+ R+ I +P D + +L Y ++G+ E+A +
Sbjct: 137 DPANVFAYNGLGDAWYGLGEREKAIDAFRKGIELDPTDAAAHFNLGELYYDLGETEEAEK 196
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL 216
+ +L PD + T L++ + +I LE YL+ S +D + A+L
Sbjct: 197 ECLEAVRLDPDFTMSYLTLGSLYMDDERVKDAIRYLELYLQKEKSPQARETVDEVKAVL 255
Score = 114 (45.2 bits), Expect = 0.00094, P = 0.00094
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F A ++ + V +P+ PE Y LG A G A Y L+P D
Sbjct: 19 GDFTAAEAMFRTCVERAPDDPEGYFYLGEALVEEGKLAEARQQYEKGLALAPGDVDGQIA 78
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ + A+ R+A+ +P++ +++ Y + + KA E++E+ ++ P
Sbjct: 79 LGDICLELAEHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEETSKAIEAFEKALEIDP 138
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
NV A + G+ ++I + +++ P+DA
Sbjct: 139 ANVFAYNGLGDAWYGLGEREKAIDAFRKGIELDPTDA 175
>UNIPROTKB|Q8IUR5 [details] [associations]
symbol:TMTC1 "Transmembrane and TPR repeat-containing
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0016021 GO:GO:0005739 eggNOG:COG0457
Gene3D:1.25.40.10 HSSP:O15294 EMBL:AC012151 InterPro:IPR013618
Pfam:PF08409 EMBL:GQ865601 EMBL:AK055962 EMBL:AK127297
EMBL:AC009320 EMBL:AC009510 EMBL:AC022078 EMBL:BC028716
EMBL:BC042083 EMBL:AF319520 IPI:IPI00043430 IPI:IPI00216822
IPI:IPI00444554 IPI:IPI00795924 IPI:IPI00977296
RefSeq:NP_001180380.1 RefSeq:NP_787057.2 UniGene:Hs.401954
ProteinModelPortal:Q8IUR5 SMR:Q8IUR5 STRING:Q8IUR5
PhosphoSite:Q8IUR5 DMDM:269849473 PaxDb:Q8IUR5 PRIDE:Q8IUR5
Ensembl:ENST00000256062 Ensembl:ENST00000381224
Ensembl:ENST00000539277 GeneID:83857 KEGG:hsa:83857 UCSC:uc001riy.3
UCSC:uc001riz.3 UCSC:uc001rja.3 UCSC:uc001rjc.1 CTD:83857
GeneCards:GC12M029653 HGNC:HGNC:24099 HPA:HPA016720
neXtProt:NX_Q8IUR5 PharmGKB:PA142670718 HOVERGEN:HBG106148
InParanoid:Q8IUR5 OrthoDB:EOG41C6VN ChiTaRS:TMTC1 GenomeRNAi:83857
NextBio:72853 ArrayExpress:Q8IUR5 Bgee:Q8IUR5 CleanEx:HS_TMTC1
Genevestigator:Q8IUR5 Uniprot:Q8IUR5
Length = 882
Score = 148 (57.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 43/180 (23%), Positives = 81/180 (45%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 565 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGV 624
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ A E Y++ ++
Sbjct: 625 FLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE 684
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I +E + PS +L + + ++A++ + EK HI
Sbjct: 685 ILSPLGA-LYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 743
Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 523 LPNLLKNEENQCL-IIDLCKALASLQR-YEEASEIINLSMRLAYNILPLEKK--EELRSL 578
+ N + +EE CL L A+ S Q +++A + I+ +++L P + K EL
Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLK----PKDPKVISELFFT 794
Query: 579 GAKMAYDSTDPNHGFDCAKYILQLHPYSLSAW 610
+ + F+ + +QL+P AW
Sbjct: 795 KGNQLREQNLLDKAFESYRVAVQLNPDQAQAW 826
>UNIPROTKB|Q83DZ1 [details] [associations]
symbol:CBU_0547 "Tetratricopeptide repeat family protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:1.25.40.10
OMA:YKISTIY RefSeq:NP_819579.1 ProteinModelPortal:Q83DZ1
PRIDE:Q83DZ1 GeneID:1208432 KEGG:cbu:CBU_0547 PATRIC:17929791
HOGENOM:HOG000026947 ProtClustDB:CLSK914140
BioCyc:CBUR227377:GJ7S-550-MONOMER Uniprot:Q83DZ1
Length = 561
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/167 (25%), Positives = 81/167 (48%)
Query: 45 YAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
Y Y G+F +AI+ ++ + L P + GLAH + A D++ A L+P+
Sbjct: 182 YMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD 241
Query: 104 LWKQLLTFAVQKGDTAQAM-YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
L T +Q+GD +A+ +Y+RQ + + + + Y E + +A + ++Q
Sbjct: 242 CHYSLATAYLQRGDHKEALLHYLRQLEKKPQIECYYNVGVLHMYQE--RHREAIDYFKQA 299
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
L P+ +A A ++LK Q ++I E L + P+D+++ I
Sbjct: 300 LTLDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHI 346
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 61/307 (19%), Positives = 122/307 (39%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
K+L A Q+ G+ + A+ +V+ P + G+A S LG + A + A
Sbjct: 4 KLLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRAL 63
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P+++ Q G +A QAI+ +P + ++A+ + ++ A
Sbjct: 64 LLEPQNATFQNSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQKKFDNA 123
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
++Y++ L P +A A+L ++ ++I L+ + + S + L +
Sbjct: 124 KKAYQKAIALKPHFANAHFNYARLLIELENYHQAIAELKRTVAM--SSHHSAAFSQLAHV 181
Query: 216 LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNA 275
M + K + + E R + + + G+ +L+ +KA F + N
Sbjct: 182 YMYLGDFSKAITYYEK----RLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNP 237
Query: 276 IDHADLITEVADTLMSLG-HSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAI 334
+H D +A + G H + L Y LE + Y + ++ + AI
Sbjct: 238 -EHPDCHYSLATAYLQRGDHKEALLHYLRQLEKKPQIE---CYYNVGVLHMYQERHREAI 293
Query: 335 MFFYKAL 341
+F +AL
Sbjct: 294 DYFKQAL 300
>TIGR_CMR|CBU_0547 [details] [associations]
symbol:CBU_0547 "TPR domain protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:1.25.40.10 OMA:YKISTIY
RefSeq:NP_819579.1 ProteinModelPortal:Q83DZ1 PRIDE:Q83DZ1
GeneID:1208432 KEGG:cbu:CBU_0547 PATRIC:17929791
HOGENOM:HOG000026947 ProtClustDB:CLSK914140
BioCyc:CBUR227377:GJ7S-550-MONOMER Uniprot:Q83DZ1
Length = 561
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/167 (25%), Positives = 81/167 (48%)
Query: 45 YAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
Y Y G+F +AI+ ++ + L P + GLAH + A D++ A L+P+
Sbjct: 182 YMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD 241
Query: 104 LWKQLLTFAVQKGDTAQAM-YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
L T +Q+GD +A+ +Y+RQ + + + + Y E + +A + ++Q
Sbjct: 242 CHYSLATAYLQRGDHKEALLHYLRQLEKKPQIECYYNVGVLHMYQE--RHREAIDYFKQA 299
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
L P+ +A A ++LK Q ++I E L + P+D+++ I
Sbjct: 300 LTLDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHI 346
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 61/307 (19%), Positives = 122/307 (39%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
K+L A Q+ G+ + A+ +V+ P + G+A S LG + A + A
Sbjct: 4 KLLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRAL 63
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P+++ Q G +A QAI+ +P + ++A+ + ++ A
Sbjct: 64 LLEPQNATFQNSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQKKFDNA 123
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
++Y++ L P +A A+L ++ ++I L+ + + S + L +
Sbjct: 124 KKAYQKAIALKPHFANAHFNYARLLIELENYHQAIAELKRTVAM--SSHHSAAFSQLAHV 181
Query: 216 LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNA 275
M + K + + E R + + + G+ +L+ +KA F + N
Sbjct: 182 YMYLGDFSKAITYYEK----RLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNP 237
Query: 276 IDHADLITEVADTLMSLG-HSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAI 334
+H D +A + G H + L Y LE + Y + ++ + AI
Sbjct: 238 -EHPDCHYSLATAYLQRGDHKEALLHYLRQLEKKPQIE---CYYNVGVLHMYQERHREAI 293
Query: 335 MFFYKAL 341
+F +AL
Sbjct: 294 DYFKQAL 300
>ZFIN|ZDB-GENE-030131-574 [details] [associations]
symbol:ift88 "intraflagellar transport 88 homolog"
species:7955 "Danio rerio" [GO:0042462 "eye photoreceptor cell
development" evidence=IMP] [GO:0045494 "photoreceptor cell
maintenance" evidence=IMP] [GO:0035058 "nonmotile primary cilium
assembly" evidence=IMP] [GO:0005932 "microtubule basal body"
evidence=IDA] [GO:0005930 "axoneme" evidence=IDA] [GO:0042384
"cilium assembly" evidence=IMP] [GO:0001539 "ciliary or flagellar
motility" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0072019 "proximal convoluted tubule development"
evidence=IMP] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IMP] [GO:0071482 "cellular response to
light stimulus" evidence=IMP] [GO:0060785 "regulation of apoptosis
involved in tissue homeostasis" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IGI;IMP]
[GO:0007369 "gastrulation" evidence=IMP] [GO:0005929 "cilium"
evidence=IDA] [GO:0005622 "intracellular" evidence=IMP] [GO:0042073
"intraflagellar transport" evidence=IMP] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13174 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
ZFIN:ZDB-GENE-030131-574 GO:GO:0005929 GO:GO:0045494
Gene3D:1.25.40.10 InterPro:IPR006597 SMART:SM00671 GO:GO:0007368
GO:GO:0005932 InterPro:IPR013105 Pfam:PF07719 GO:GO:0007369
GO:GO:0042073 GO:GO:0035058 GO:GO:0001539 GO:GO:0042462
GO:GO:0045880 GO:GO:0071482 GO:GO:0005930 GO:GO:0060785
GeneTree:ENSGT00390000015473 EMBL:CR392366 IPI:IPI00890468
ProteinModelPortal:F1QVN7 Ensembl:ENSDART00000110943
ArrayExpress:F1QVN7 Bgee:F1QVN7 GO:GO:0072019 Uniprot:F1QVN7
Length = 855
Score = 142 (55.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 31/123 (25%), Positives = 63/123 (51%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L ++ ++P + LG + G+ AF +Y + P + ++ + L +
Sbjct: 571 QAIEWLMQLTSVTPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS Y G+Y+KA E+Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPENVE 690
Query: 172 ATK 174
+
Sbjct: 691 CLR 693
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 39/192 (20%), Positives = 79/192 (41%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++ + + + ++E+A KE +R + E LGL + LG + A D + + H
Sbjct: 488 LINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLEEALDCF-LKLH 546
Query: 97 LSPKDSA-LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
++SA + QL D QA+ ++ Q P D + L Y GD +A
Sbjct: 547 AILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDLYDNEGDKSQA 606
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
+ Y + + FP N+ + ++ ++I E + P+ + ++ +
Sbjct: 607 FQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQL--MVASC 664
Query: 216 LMENNAYEKTLQ 227
+ Y+K L+
Sbjct: 665 YRRSGNYQKALE 676
>UNIPROTKB|Q13099 [details] [associations]
symbol:IFT88 "Intraflagellar transport protein 88 homolog"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003382 "epithelial cell
morphogenesis" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0016485 "protein processing"
evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032391
"photoreceptor connecting cilium" evidence=IEA] [GO:0035085 "cilium
axoneme" evidence=IEA] [GO:0042487 "regulation of odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045177 "apical part of cell"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060411 "cardiac septum morphogenesis" evidence=IEA]
[GO:0060426 "lung vasculature development" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0005814
"centriole" evidence=ISS] [GO:0005929 "cilium" evidence=ISS]
[GO:0060271 "cilium morphogenesis" evidence=ISS] [GO:0031514
"motile cilium" evidence=ISS] [GO:0030992 "intraflagellar transport
particle B" evidence=ISS] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13174
Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0005814 GO:GO:0009952 EMBL:CH471075 GO:GO:0005929
GO:GO:0001701 GO:GO:0045177 GO:GO:0003382 eggNOG:COG0457
Gene3D:1.25.40.10 InterPro:IPR006597 SMART:SM00671 GO:GO:0009434
GO:GO:0007368 GO:GO:0005932 GO:GO:0009953 InterPro:IPR013105
Pfam:PF07719 GO:GO:0045862 GO:GO:0042733 GO:GO:0016485
GO:GO:0007224 GO:GO:0032391 GO:GO:0060271 GO:GO:0035085
GO:GO:0042487 GO:GO:0021537 GO:GO:0048568 GO:GO:0060411
EMBL:AL590096 GO:GO:0031512 GO:GO:0060426 GO:GO:0048853
GO:GO:0030992 EMBL:U20362 EMBL:AK300769 EMBL:AL161772 EMBL:BC030776
IPI:IPI00402297 IPI:IPI00646878 IPI:IPI00973733 RefSeq:NP_006522.2
RefSeq:NP_783195.2 UniGene:Hs.187376 ProteinModelPortal:Q13099
SMR:Q13099 IntAct:Q13099 STRING:Q13099 PhosphoSite:Q13099
DMDM:206729873 PaxDb:Q13099 PRIDE:Q13099 DNASU:8100
Ensembl:ENST00000319980 Ensembl:ENST00000351808 GeneID:8100
KEGG:hsa:8100 UCSC:uc001unh.3 CTD:8100 GeneCards:GC13P021141
HGNC:HGNC:20606 HPA:HPA040731 MIM:600595 neXtProt:NX_Q13099
PharmGKB:PA134991804 HOGENOM:HOG000258203 HOVERGEN:HBG059328
InParanoid:Q13099 KO:K16474 OMA:CYRRSGN OrthoDB:EOG45DWNT
GenomeRNAi:8100 NextBio:30744 ArrayExpress:Q13099 Bgee:Q13099
CleanEx:HS_IFT88 Genevestigator:Q13099 GermOnline:ENSG00000032742
Uniprot:Q13099
Length = 833
Score = 141 (54.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVDA----TKTGAQLFLKCGQT-ARSIGILEEYLKV 199
NV+ + L LK Q AR + LE+ ++
Sbjct: 696 NVECLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEI 731
>RGD|1309717 [details] [associations]
symbol:Ift88 "intraflagellar transport 88 homolog
(Chlamydomonas)" species:10116 "Rattus norvegicus" [GO:0001654 "eye
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003382 "epithelial cell
morphogenesis" evidence=IEA;ISO] [GO:0005814 "centriole"
evidence=IEA;ISO] [GO:0005929 "cilium" evidence=ISO] [GO:0005930
"axoneme" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0007224 "smoothened signaling pathway"
evidence=IEA;ISO] [GO:0007368 "determination of left/right
symmetry" evidence=IEA;ISO] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008104 "protein localization" evidence=ISO] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA;ISO] [GO:0016485
"protein processing" evidence=IEA;ISO] [GO:0021513 "spinal cord
dorsal/ventral patterning" evidence=ISO] [GO:0021537 "telencephalon
development" evidence=IEA;ISO] [GO:0030324 "lung development"
evidence=ISO] [GO:0031512 "motile primary cilium" evidence=IEA;ISO]
[GO:0032391 "photoreceptor connecting cilium" evidence=IEA;ISO]
[GO:0035085 "cilium axoneme" evidence=IEA;ISO] [GO:0042487
"regulation of odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA;ISO] [GO:0045177 "apical part of cell"
evidence=IEA;ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA;ISO] [GO:0048568 "embryonic organ development"
evidence=IEA;ISO] [GO:0048598 "embryonic morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060271 "cilium
morphogenesis" evidence=IEA;ISO] [GO:0060411 "cardiac septum
morphogenesis" evidence=IEA;ISO] [GO:0060426 "lung vasculature
development" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13174 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 RGD:1309717 GO:GO:0019861 GO:GO:0005814 GO:GO:0009952
GO:GO:0001701 GO:GO:0045177 GO:GO:0003382 Gene3D:1.25.40.10
GO:GO:0007368 GO:GO:0005932 GO:GO:0009953 GO:GO:0045862
GO:GO:0042733 GO:GO:0016485 GO:GO:0007224 GO:GO:0032391
GO:GO:0060271 GO:GO:0035085 GO:GO:0042487 GO:GO:0021537
GO:GO:0048568 GO:GO:0060411 GO:GO:0031512 EMBL:CH474049
GO:GO:0060426 GO:GO:0048853 CTD:8100 KO:K16474 OrthoDB:EOG45DWNT
GeneTree:ENSGT00390000015473 IPI:IPI00372651 RefSeq:NP_001100736.1
UniGene:Rn.132110 Ensembl:ENSRNOT00000012988 GeneID:305918
KEGG:rno:305918 UCSC:RGD:1309717 NextBio:655246 Uniprot:D4ACI9
Length = 815
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/123 (23%), Positives = 64/123 (52%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 690
Query: 172 ATK 174
+
Sbjct: 691 CLR 693
Score = 125 (49.1 bits), Expect = 0.00036, P = 0.00036
Identities = 39/183 (21%), Positives = 75/183 (40%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA- 103
+A G++E+A KE +R + E +GL + L A D + + H ++SA
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSF-LKLHAILRNSAQ 554
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ Q+ D QA+ ++ Q I P D L Y GD +A + Y +
Sbjct: 555 VLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESY 614
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ FP N++ + ++ ++I E + P+ + ++ + + Y+
Sbjct: 615 RYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQL--MVASCFRRSGNYQ 672
Query: 224 KTL 226
K L
Sbjct: 673 KAL 675
>UNIPROTKB|E1C168 [details] [associations]
symbol:IFT88 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003382 "epithelial cell morphogenesis" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] [GO:0005932 "microtubule
basal body" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0016485 "protein processing"
evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032391
"photoreceptor connecting cilium" evidence=IEA] [GO:0035085 "cilium
axoneme" evidence=IEA] [GO:0042487 "regulation of odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045177 "apical part of cell"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060271 "cilium morphogenesis" evidence=IEA] [GO:0060411
"cardiac septum morphogenesis" evidence=IEA] [GO:0060426 "lung
vasculature development" evidence=IEA] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13174 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 GO:GO:0005814 GO:GO:0045177
Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 GO:GO:0005932
InterPro:IPR013105 Pfam:PF07719 GO:GO:0045862 GO:GO:0016485
GO:GO:0007224 GO:GO:0032391 GO:GO:0035085 GO:GO:0042487
GO:GO:0031512 OMA:CYRRSGN GeneTree:ENSGT00390000015473
EMBL:AADN02005095 EMBL:AADN02005096 IPI:IPI00589996
UniGene:Gga.50321 Ensembl:ENSGALT00000027679 Uniprot:E1C168
Length = 816
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P P LG + G+ AF +Y + P + + + L +
Sbjct: 570 QAIEWLMQLISVVPTDPHVLTKLGKLYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAY 629
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A P + ++ +AS Y G+Y+KA E Y+ I + FP+NV+
Sbjct: 630 CIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEKYKVIHQKFPENVE 689
Query: 172 ATK 174
+
Sbjct: 690 CLR 692
>MGI|MGI:98715 [details] [associations]
symbol:Ift88 "intraflagellar transport 88" species:10090 "Mus
musculus" [GO:0001654 "eye development" evidence=IGI] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0003382
"epithelial cell morphogenesis" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005814 "centriole" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005929 "cilium" evidence=IDA] [GO:0005930
"axoneme" evidence=IDA] [GO:0005932 "microtubule basal body"
evidence=IDA] [GO:0007224 "smoothened signaling pathway"
evidence=IGI;IMP] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007420 "brain development" evidence=IGI;IMP]
[GO:0007507 "heart development" evidence=IGI] [GO:0008104 "protein
localization" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0016485 "protein processing"
evidence=IMP] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IMP] [GO:0021537 "telencephalon development" evidence=IMP]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0030324 "lung development" evidence=IMP] [GO:0031512 "motile
primary cilium" evidence=IDA] [GO:0032391 "photoreceptor connecting
cilium" evidence=IDA] [GO:0035085 "cilium axoneme" evidence=IDA]
[GO:0042487 "regulation of odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI;IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IDA] [GO:0045862
"positive regulation of proteolysis" evidence=IMP] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048598 "embryonic
morphogenesis" evidence=IGI] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060021 "palate development" evidence=IGI]
[GO:0060173 "limb development" evidence=IGI] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0060411 "cardiac septum
morphogenesis" evidence=IMP] [GO:0060426 "lung vasculature
development" evidence=IMP] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13174
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 MGI:MGI:98715
GO:GO:0008104 GO:GO:0005814 GO:GO:0009952 GO:GO:0001701
GO:GO:0045177 GO:GO:0003382 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0007368 GO:GO:0005932 GO:GO:0009953 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0060021
GO:GO:0042733 GO:GO:0016485 GO:GO:0007224 GO:GO:0032391
GO:GO:0060271 GO:GO:0035085 GO:GO:0001654 GO:GO:0042487
GO:GO:0021537 GO:GO:0048568 GO:GO:0060411 GO:GO:0031512
GO:GO:0060426 GO:GO:0048853 CTD:8100 HOGENOM:HOG000258203
HOVERGEN:HBG059328 KO:K16474 OMA:CYRRSGN OrthoDB:EOG45DWNT
EMBL:L31959 EMBL:AK135110 EMBL:AC124462 EMBL:AC154675 EMBL:BC012250
IPI:IPI00988448 PIR:I49564 RefSeq:NP_033402.2 UniGene:Mm.4653
ProteinModelPortal:Q61371 SMR:Q61371 STRING:Q61371
PhosphoSite:Q61371 PaxDb:Q61371 PRIDE:Q61371 GeneID:21821
KEGG:mmu:21821 InParanoid:Q3UXY9 ChiTaRS:IFT88 NextBio:301236
Bgee:Q61371 Genevestigator:Q61371 GermOnline:ENSMUSG00000040040
Uniprot:Q61371
Length = 824
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/123 (23%), Positives = 64/123 (52%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 570 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 629
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 630 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 689
Query: 172 ATK 174
+
Sbjct: 690 CLR 692
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 39/183 (21%), Positives = 75/183 (40%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA- 103
+A G++E+A KE +R + E +GL + L A D + + H ++SA
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSF-LKLHAILRNSAQ 553
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ Q+ D QA+ ++ Q I P D L Y GD +A + Y +
Sbjct: 554 VLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESY 613
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ FP N++ + ++ ++I E + P+ + ++ + + Y+
Sbjct: 614 RYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQL--MVASCFRRSGNYQ 671
Query: 224 KTL 226
K L
Sbjct: 672 KAL 674
>RGD|1309134 [details] [associations]
symbol:Bbs4 "Bardet-Biedl syndrome 4" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=ISO] [GO:0000242 "pericentriolar material"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0001895 "retina homeostasis"
evidence=IEA;ISO] [GO:0003085 "negative regulation of systemic
arterial blood pressure" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003777 "microtubule motor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005814 "centriole" evidence=IEA;ISO] [GO:0005932 "microtubule
basal body" evidence=IEA;ISO] [GO:0007286 "spermatid development"
evidence=IEA;ISO] [GO:0007608 "sensory perception of smell"
evidence=IEA;ISO] [GO:0008104 "protein localization" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016358
"dendrite development" evidence=IEA;ISO] [GO:0019216 "regulation of
lipid metabolic process" evidence=IEA;ISO] [GO:0021756 "striatum
development" evidence=IEA;ISO] [GO:0021766 "hippocampus
development" evidence=IEA;ISO] [GO:0021987 "cerebral cortex
development" evidence=IEA;ISO] [GO:0030534 "adult behavior"
evidence=IEA;ISO] [GO:0031513 "nonmotile primary cilium"
evidence=IEA;ISO] [GO:0031514 "motile cilium" evidence=ISO]
[GO:0032465 "regulation of cytokinesis" evidence=IEA;ISO]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA;ISO] [GO:0033210
"leptin-mediated signaling pathway" evidence=ISO] [GO:0033365
"protein localization to organelle" evidence=ISO] [GO:0034451
"centriolar satellite" evidence=IEA;ISO] [GO:0034452 "dynactin
binding" evidence=IEA;ISO] [GO:0034454 "microtubule anchoring at
centrosome" evidence=IEA;ISO] [GO:0034464 "BBSome"
evidence=IEA;ISO] [GO:0035058 "nonmotile primary cilium assembly"
evidence=IEA;ISO] [GO:0038108 "negative regulation of appetite by
leptin-mediated signaling pathway" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0043014 "alpha-tubulin binding"
evidence=IEA;ISO] [GO:0044321 "response to leptin stimulus"
evidence=ISO] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA;ISO]
[GO:0045724 "positive regulation of cilium assembly"
evidence=IEA;ISO] [GO:0046548 "retinal rod cell development"
evidence=IEA;ISO] [GO:0048487 "beta-tubulin binding"
evidence=IEA;ISO] [GO:0048854 "brain morphogenesis"
evidence=IEA;ISO] [GO:0051297 "centrosome organization"
evidence=IEA;ISO] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA;ISO] [GO:0060170 "cilium membrane"
evidence=IEA;ISO] [GO:0060271 "cilium morphogenesis" evidence=ISO]
[GO:0060296 "regulation of cilium beat frequency involved in
ciliary motility" evidence=IEA;ISO] [GO:0042384 "cilium assembly"
evidence=ISO] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
RGD:1309134 GO:GO:0005634 GO:GO:0021987 GO:GO:0021766 GO:GO:0005814
GO:GO:0051297 GO:GO:0007286 GO:GO:0016358 GO:GO:0040018
GO:GO:0019216 GO:GO:0045494 Gene3D:1.25.40.10 GO:GO:0007608
GO:GO:0030534 GO:GO:0001843 GO:GO:0010629 GO:GO:0005932
InterPro:IPR013105 Pfam:PF07719 GO:GO:0001895 GO:GO:0000242
GO:GO:0045444 GO:GO:0034451 GO:GO:0033205 GO:GO:0046548
GO:GO:0003777 GO:GO:0051457 GO:GO:0060170 EMBL:CH473975
GO:GO:0034464 GO:GO:0035058 GO:GO:0048854 GO:GO:0038108
GO:GO:0060296 GO:GO:0021756 CTD:585 GeneTree:ENSGT00530000063455
KO:K16531 OrthoDB:EOG4GF3DX GO:GO:0031513 GO:GO:0034454
GO:GO:0003085 GO:GO:0045724 GO:GO:0032465 IPI:IPI00869681
RefSeq:NP_001100296.1 UniGene:Rn.25002 Ensembl:ENSRNOT00000031262
GeneID:300754 KEGG:rno:300754 UCSC:RGD:1309134 NextBio:647438
Uniprot:D4A8B1
Length = 520
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/298 (21%), Positives = 127/298 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++++ L + LSP + + + LG HK+A + Y AA L+ KD +
Sbjct: 81 GNIQESLELFQTCAVLSPQCADNLKQVARSLFLLGKHKAATEVYNEAAKLNQKDWEICHN 140
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++A + A++ D++ I L ++ GD +KA E Y++ + P
Sbjct: 141 LGVCYTYLKQFSKAQDQLHSALQLNKHDLTY-IMLGKIHLLQGDLDKAIEIYKKAVEFSP 199
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N + T L+L+ G ++ L L P A+ I +++ + ++ L
Sbjct: 200 ENTELLTTLGLLYLQLGVYQKAFEHLGNALTYDP--ANYKAILAAGSMMQTHGDFDVALT 257
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD--LITEV 285
++V + E P L G+C+ +K + L+ N + D ++ +
Sbjct: 258 KY---RVVACAIPESP-PLWNNIGMCFF---GKKKYVAAISCLKRANYLAPFDWKILYNL 310
Query: 286 ADTLMSLGHSNSALKYYHFLET--NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
+++ SA +HFL N G LY+ LA +L++ +A + +A+
Sbjct: 311 GLVHLTMQQYASA---FHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYVEAV 365
>UNIPROTKB|F1SI91 [details] [associations]
symbol:BBS4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060296 "regulation of cilium beat frequency involved
in ciliary motility" evidence=IEA] [GO:0060170 "cilium membrane"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:0051297 "centrosome organization"
evidence=IEA] [GO:0048854 "brain morphogenesis" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0046548
"retinal rod cell development" evidence=IEA] [GO:0045724 "positive
regulation of cilium assembly" evidence=IEA] [GO:0045494
"photoreceptor cell maintenance" evidence=IEA] [GO:0045444 "fat
cell differentiation" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0038108 "negative
regulation of appetite by leptin-mediated signaling pathway"
evidence=IEA] [GO:0035058 "nonmotile primary cilium assembly"
evidence=IEA] [GO:0034464 "BBSome" evidence=IEA] [GO:0034454
"microtubule anchoring at centrosome" evidence=IEA] [GO:0034452
"dynactin binding" evidence=IEA] [GO:0034451 "centriolar satellite"
evidence=IEA] [GO:0033205 "cell cycle cytokinesis" evidence=IEA]
[GO:0032465 "regulation of cytokinesis" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021756 "striatum development" evidence=IEA] [GO:0019216
"regulation of lipid metabolic process" evidence=IEA] [GO:0016358
"dendrite development" evidence=IEA] [GO:0010629 "negative
regulation of gene expression" evidence=IEA] [GO:0007608 "sensory
perception of smell" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0003085 "negative regulation of systemic arterial
blood pressure" evidence=IEA] [GO:0001895 "retina homeostasis"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000242 "pericentriolar material" evidence=IEA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 GO:GO:0005634
GO:GO:0021987 GO:GO:0021766 GO:GO:0005814 GO:GO:0051297
GO:GO:0007286 GO:GO:0016358 GO:GO:0040018 GO:GO:0019216
GO:GO:0045494 Gene3D:1.25.40.10 GO:GO:0007608 GO:GO:0030534
GO:GO:0001843 GO:GO:0010629 GO:GO:0005932 InterPro:IPR013105
Pfam:PF07719 GO:GO:0001895 GO:GO:0000242 GO:GO:0045444
GO:GO:0034451 GO:GO:0033205 GO:GO:0046548 GO:GO:0003777
GO:GO:0051457 GO:GO:0060170 GO:GO:0034464 GO:GO:0035058
GO:GO:0048854 GO:GO:0038108 GO:GO:0060296 GO:GO:0021756
GeneTree:ENSGT00530000063455 OMA:YNQGEKR GO:GO:0031513
GO:GO:0034454 GO:GO:0003085 GO:GO:0045724 GO:GO:0032465
EMBL:CU571030 Ensembl:ENSSSCT00000002153 Uniprot:F1SI91
Length = 512
Score = 134 (52.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 65/298 (21%), Positives = 126/298 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++++ L + LSP + + + LG HK+A + Y AA L+ KD +
Sbjct: 72 GNIQESLELFQTCAILSPQCADNLKQVARSLFLLGKHKAATEVYNEAAKLNQKDWEICHN 131
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +A + A+ D++ I L ++ GD +KA E Y++ + P
Sbjct: 132 LGVCYIYLKQFDKAQDQLHNALHLNRHDLTY-IMLGKIHLLEGDLDKAIEIYKKAVEFSP 190
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N + T L+L+ G ++ L L P++ I +++ + +E L
Sbjct: 191 ENTELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTN--YKAILAAGSMMQTHGDFEVALT 248
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD--LITEV 285
++V + E P L G+C+ +K + L+ N + D ++ +
Sbjct: 249 KY---RVVACAVPESP-PLWNNIGMCFF---GKKKYVAAISCLKRANYLAPFDWKILYNL 301
Query: 286 ADTLMSLGHSNSALKYYHFLET--NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
+++ SA +HFL N G LY+ LA +L++ +A + +A+
Sbjct: 302 GLVHLTMQQYASA---FHFLSAAINFQPKMGELYMLLAVALTNLEDLENAKRAYAEAV 356
>UNIPROTKB|Q1JQ97 [details] [associations]
symbol:BBS4 "Bardet-Biedl syndrome 4 protein homolog"
species:9913 "Bos taurus" [GO:0051297 "centrosome organization"
evidence=ISS] [GO:0003777 "microtubule motor activity"
evidence=ISS] [GO:0000242 "pericentriolar material" evidence=ISS]
[GO:0060170 "cilium membrane" evidence=IEA] [GO:0060296 "regulation
of cilium beat frequency involved in ciliary motility"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=IEA]
[GO:0046548 "retinal rod cell development" evidence=IEA]
[GO:0045724 "positive regulation of cilium assembly" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0045444 "fat cell differentiation" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0038108 "negative regulation of appetite by leptin-mediated
signaling pathway" evidence=IEA] [GO:0035058 "nonmotile primary
cilium assembly" evidence=IEA] [GO:0034464 "BBSome" evidence=IEA]
[GO:0034454 "microtubule anchoring at centrosome" evidence=IEA]
[GO:0034452 "dynactin binding" evidence=IEA] [GO:0034451
"centriolar satellite" evidence=IEA] [GO:0033205 "cell cycle
cytokinesis" evidence=IEA] [GO:0032465 "regulation of cytokinesis"
evidence=IEA] [GO:0031513 "nonmotile primary cilium" evidence=IEA]
[GO:0030534 "adult behavior" evidence=IEA] [GO:0021987 "cerebral
cortex development" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021756 "striatum development"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0007608 "sensory perception of smell" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0005932 "microtubule
basal body" evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003085 "negative
regulation of systemic arterial blood pressure" evidence=IEA]
[GO:0001895 "retina homeostasis" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005634 GO:GO:0021987 GO:GO:0021766
GO:GO:0005814 GO:GO:0051297 GO:GO:0007286 GO:GO:0016358
GO:GO:0040018 GO:GO:0019216 GO:GO:0045494 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0007608 GO:GO:0030534 GO:GO:0001843
GO:GO:0010629 GO:GO:0005932 GO:GO:0001895 GO:GO:0000242
GO:GO:0045444 GO:GO:0034451 GO:GO:0033205 GO:GO:0046548
GO:GO:0003777 GO:GO:0051457 GO:GO:0060170 GO:GO:0034464
GO:GO:0035058 GO:GO:0048854 GO:GO:0038108 GO:GO:0060296
GO:GO:0021756 EMBL:BC116137 IPI:IPI00712192 RefSeq:NP_001069424.1
UniGene:Bt.7716 ProteinModelPortal:Q1JQ97 IntAct:Q1JQ97
STRING:Q1JQ97 PRIDE:Q1JQ97 Ensembl:ENSBTAT00000010013 GeneID:532120
KEGG:bta:532120 CTD:585 GeneTree:ENSGT00530000063455
HOGENOM:HOG000261391 HOVERGEN:HBG024456 InParanoid:Q1JQ97 KO:K16531
OMA:YNQGEKR OrthoDB:EOG4GF3DX NextBio:20875615 GO:GO:0031513
GO:GO:0034454 GO:GO:0003085 GO:GO:0045724 GO:GO:0032465
Uniprot:Q1JQ97
Length = 519
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 67/300 (22%), Positives = 128/300 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++++ L + LSP + + + LG HK+A + Y AA L+ KD +
Sbjct: 81 GNIQESLRLFQMCAFLSPQCADNLKQVARSLFLLGKHKAAIEVYNEAAKLNQKDWEICHN 140
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +A + A+ D++ I L ++ GD +KA E Y++ + P
Sbjct: 141 LGVCYIYLKQFDKAQDQLHNALHLNRHDLTY-IMLGKIFLLKGDLDKAIEIYKKAVEFSP 199
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N + T L+L+ G ++ L L P++ I +++ + ++ L
Sbjct: 200 ENTELLTTLGLLYLQLGIYQKAFEHLGNTLTYDPTN--YKAILAAGSMMQTHGDFDVALT 257
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
+ +V + E P L G+C+ +K + L+ N + A L ++
Sbjct: 258 KYK---VVACAVIESP-PLWNNIGMCFF---GKKKYVAAISCLKRANYL--APLDWKI-- 306
Query: 288 TLMSLGHSNSALKYY----HFLET--NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
L +LG + ++ Y HFL N G LY+ LA +L++ +A + +A+
Sbjct: 307 -LYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDSENAKRAYEEAV 365
>MGI|MGI:2143311 [details] [associations]
symbol:Bbs4 "Bardet-Biedl syndrome 4 (human)" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0000242 "pericentriolar material" evidence=ISO]
[GO:0001843 "neural tube closure" evidence=IMP] [GO:0001895 "retina
homeostasis" evidence=IMP] [GO:0003085 "negative regulation of
systemic arterial blood pressure" evidence=IMP] [GO:0003777
"microtubule motor activity" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005814 "centriole" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005932 "microtubule basal
body" evidence=ISO] [GO:0007286 "spermatid development"
evidence=IMP] [GO:0007608 "sensory perception of smell"
evidence=IMP] [GO:0008104 "protein localization" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IMP] [GO:0019216 "regulation of lipid
metabolic process" evidence=IMP] [GO:0021756 "striatum development"
evidence=IMP] [GO:0021766 "hippocampus development" evidence=IMP]
[GO:0021987 "cerebral cortex development" evidence=IMP] [GO:0030534
"adult behavior" evidence=IMP] [GO:0031513 "nonmotile primary
cilium" evidence=ISO] [GO:0031514 "motile cilium" evidence=ISO;IMP]
[GO:0032465 "regulation of cytokinesis" evidence=ISO] [GO:0033205
"cell cycle cytokinesis" evidence=ISO] [GO:0033210 "leptin-mediated
signaling pathway" evidence=IMP] [GO:0033365 "protein localization
to organelle" evidence=IDA] [GO:0034451 "centriolar satellite"
evidence=ISO] [GO:0034452 "dynactin binding" evidence=ISO]
[GO:0034454 "microtubule anchoring at centrosome" evidence=ISO]
[GO:0034464 "BBSome" evidence=ISO;IDA] [GO:0035058 "nonmotile
primary cilium assembly" evidence=IMP] [GO:0038108 "negative
regulation of appetite by leptin-mediated signaling pathway"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0044321
"response to leptin stimulus" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0045724
"positive regulation of cilium assembly" evidence=IMP] [GO:0046548
"retinal rod cell development" evidence=IMP] [GO:0048487
"beta-tubulin binding" evidence=ISO] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0051297 "centrosome organization"
evidence=ISO] [GO:0051457 "maintenance of protein location in
nucleus" evidence=ISO] [GO:0060170 "cilium membrane" evidence=ISO]
[GO:0060271 "cilium morphogenesis" evidence=IMP] [GO:0060296
"regulation of cilium beat frequency involved in ciliary motility"
evidence=IMP] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:2143311 GO:GO:0005634 GO:GO:0021987 GO:GO:0021766
GO:GO:0005814 GO:GO:0051297 GO:GO:0007286 GO:GO:0016358
GO:GO:0040018 GO:GO:0019216 GO:GO:0045494 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0007608 GO:GO:0030534 GO:GO:0001843
GO:GO:0010629 GO:GO:0033365 GO:GO:0005932 InterPro:IPR013105
Pfam:PF07719 GO:GO:0001895 GO:GO:0031514 GO:GO:0000242
GO:GO:0045444 GO:GO:0034451 GO:GO:0033205 GO:GO:0046548
GO:GO:0003777 GO:GO:0051457 GO:GO:0060170 GO:GO:0034464
GO:GO:0035058 GO:GO:0048854 GO:GO:0038108 GO:GO:0060296
GO:GO:0021756 CTD:585 GeneTree:ENSGT00530000063455
HOGENOM:HOG000261391 HOVERGEN:HBG024456 KO:K16531 OMA:YNQGEKR
OrthoDB:EOG4GF3DX GO:GO:0031513 GO:GO:0034454 GO:GO:0003085
GO:GO:0045724 GO:GO:0032465 EMBL:AK039560 EMBL:AK089970
EMBL:AK134734 EMBL:BC055797 EMBL:BC089507 EMBL:BC092531
IPI:IPI00224571 RefSeq:NP_780534.1 UniGene:Mm.200714
ProteinModelPortal:Q8C1Z7 SMR:Q8C1Z7 IntAct:Q8C1Z7 STRING:Q8C1Z7
PhosphoSite:Q8C1Z7 PRIDE:Q8C1Z7 Ensembl:ENSMUST00000026265
GeneID:102774 KEGG:mmu:102774 InParanoid:Q8C1Z7 NextBio:355647
Bgee:Q8C1Z7 CleanEx:MM_BBS4 Genevestigator:Q8C1Z7
GermOnline:ENSMUSG00000025235 Uniprot:Q8C1Z7
Length = 520
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 65/298 (21%), Positives = 126/298 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++++ L + LSP + + + LG HK+A + Y AA L+ KD +
Sbjct: 81 GNIQESLELFQTCAVLSPQCADNLKQVARSLFLLGKHKAATEVYNEAAKLNQKDWEICHN 140
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +A + A++ D++ I L ++ GD +KA E Y++ + P
Sbjct: 141 LGVCYTYLKQFNKAQDQLHSALQLNKHDLTY-IMLGKIHLLQGDLDKAIEIYKKAVEFSP 199
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N + T L+L+ G ++ L L P A+ I +++ + ++ L
Sbjct: 200 ENTELLTTLGLLYLQLGVYQKAFEHLGNALTYDP--ANYKAILAAGSMMQTHGDFDVALT 257
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD--LITEV 285
++V + E P L G+C+ +K + L+ N + D ++ +
Sbjct: 258 KY---RVVACAIPESP-PLWNNIGMCFF---GKKKYVAAISCLKRANYLAPFDWKILYNL 310
Query: 286 ADTLMSLGHSNSALKYYHFLET--NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
+++ SA +HFL N G LY+ LA +L++ +A + +A+
Sbjct: 311 GLVHLTMQQYASA---FHFLSAAINFQPKMGELYMLLAVALTNLEDIENARRAYVEAV 365
>UNIPROTKB|Q96RK4 [details] [associations]
symbol:BBS4 "Bardet-Biedl syndrome 4 protein" species:9606
"Homo sapiens" [GO:0003085 "negative regulation of systemic
arterial blood pressure" evidence=IEA] [GO:0010629 "negative
regulation of gene expression" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0051297 "centrosome organization" evidence=IMP] [GO:0000242
"pericentriolar material" evidence=IDA] [GO:0003777 "microtubule
motor activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0034464 "BBSome" evidence=IDA] [GO:0045444 "fat
cell differentiation" evidence=ISS] [GO:0060271 "cilium
morphogenesis" evidence=ISS] [GO:0060296 "regulation of cilium beat
frequency involved in ciliary motility" evidence=ISS] [GO:0001947
"heart looping" evidence=ISS] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=ISS] [GO:0001843 "neural tube closure" evidence=ISS]
[GO:0001895 "retina homeostasis" evidence=ISS] [GO:0007286
"spermatid development" evidence=ISS] [GO:0007608 "sensory
perception of smell" evidence=ISS] [GO:0016358 "dendrite
development" evidence=ISS] [GO:0019216 "regulation of lipid
metabolic process" evidence=ISS] [GO:0021756 "striatum development"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021987 "cerebral cortex development" evidence=ISS] [GO:0030534
"adult behavior" evidence=ISS] [GO:0035058 "nonmotile primary
cilium assembly" evidence=ISS] [GO:0045494 "photoreceptor cell
maintenance" evidence=ISS] [GO:0045724 "positive regulation of
cilium assembly" evidence=ISS] [GO:0046548 "retinal rod cell
development" evidence=ISS] [GO:0048854 "brain morphogenesis"
evidence=ISS] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0046907 "intracellular transport" evidence=ISS] [GO:0051877
"pigment granule aggregation in cell center" evidence=ISS]
[GO:0060027 "convergent extension involved in gastrulation"
evidence=ISS] [GO:0005813 "centrosome" evidence=IDA] [GO:0050893
"sensory processing" evidence=TAS] [GO:0034451 "centriolar
satellite" evidence=IDA] [GO:0034452 "dynactin binding"
evidence=IDA] [GO:0034454 "microtubule anchoring at centrosome"
evidence=IMP] [GO:0033365 "protein localization to organelle"
evidence=ISS] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0031514 "motile cilium" evidence=IDA] [GO:0005814 "centriole"
evidence=IDA] [GO:0032465 "regulation of cytokinesis" evidence=IMP]
[GO:0033205 "cell cycle cytokinesis" evidence=IMP] [GO:0051457
"maintenance of protein location in nucleus" evidence=IGI]
[GO:0031513 "nonmotile primary cilium" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0048487 "beta-tubulin
binding" evidence=IDA] [GO:0060170 "cilium membrane" evidence=IDA]
[GO:0038108 "negative regulation of appetite by leptin-mediated
signaling pathway" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005634 GO:GO:0021987 GO:GO:0021766
GO:GO:0005814 GO:GO:0051297 GO:GO:0007286 GO:GO:0016358
GO:GO:0040018 GO:GO:0019216 GO:GO:0045494 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0007608 GO:GO:0030534 GO:GO:0001843
GO:GO:0010629 GO:GO:0005932 GO:GO:0001947 GO:GO:0001895
GO:GO:0048487 GO:GO:0031514 GO:GO:0000242 GO:GO:0045444
GO:GO:0034451 GO:GO:0033205 GO:GO:0046548 GO:GO:0046907
GO:GO:0003777 GO:GO:0051457 GO:GO:0043014 GO:GO:0060170
GO:GO:0032402 MIM:209900 Orphanet:110 GO:GO:0060027 GO:GO:0034464
GO:GO:0035058 GO:GO:0051877 GO:GO:0048854 GO:GO:0038108
GO:GO:0060296 GO:GO:0021756 CTD:585 HOGENOM:HOG000261391
HOVERGEN:HBG024456 KO:K16531 OMA:YNQGEKR OrthoDB:EOG4GF3DX
GO:GO:0031513 GO:GO:0034454 GO:GO:0003085 GO:GO:0045724
GO:GO:0032465 EMBL:AF359281 EMBL:AY457143 EMBL:AK075321
EMBL:BC008923 EMBL:BC027624 IPI:IPI00290189 IPI:IPI00798373
RefSeq:NP_149017.2 UniGene:Hs.208681 ProteinModelPortal:Q96RK4
SMR:Q96RK4 IntAct:Q96RK4 STRING:Q96RK4 PhosphoSite:Q96RK4
DMDM:160359000 PRIDE:Q96RK4 DNASU:585 Ensembl:ENST00000268057
Ensembl:ENST00000395205 GeneID:585 KEGG:hsa:585 UCSC:uc002avb.3
UCSC:uc002avd.3 GeneCards:GC15P072978 H-InvDB:HIX0012411
HGNC:HGNC:969 HPA:HPA039418 MIM:600374 neXtProt:NX_Q96RK4
PharmGKB:PA25278 InParanoid:Q96RK4 PhylomeDB:Q96RK4 GenomeRNAi:585
NextBio:2391 ArrayExpress:Q96RK4 Bgee:Q96RK4 CleanEx:HS_BBS4
Genevestigator:Q96RK4 GermOnline:ENSG00000140463 GO:GO:0034452
GO:GO:0050893 Uniprot:Q96RK4
Length = 519
Score = 130 (50.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 64/298 (21%), Positives = 126/298 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++++ L + LSP + + + LG HK+A + Y AA L+ KD +
Sbjct: 81 GNIQESLELFQTCAVLSPQSADNLKQVARSLFLLGKHKAAIEVYNEAAKLNQKDWEISHN 140
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +A + A+ D++ I L ++ GD +KA E Y++ + P
Sbjct: 141 LGVCYIYLKQFNKAQDQLHNALNLNRHDLTY-IMLGKIHLLEGDLDKAIEVYKKAVEFSP 199
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N + T L+L+ G ++ L L P++ I +++ + ++ L
Sbjct: 200 ENTELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTN--YKAILAAGSMMQTHGDFDVALT 257
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD--LITEV 285
++V + E P L G+C+ +K + L+ N + D ++ +
Sbjct: 258 KY---RVVACAVPESP-PLWNNIGMCFF---GKKKYVAAISCLKRANYLAPFDWKILYNL 310
Query: 286 ADTLMSLGHSNSALKYYHFLET--NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
+++ SA +HFL N G LY+ LA +L++ +A + +A+
Sbjct: 311 GLVHLTMQQYASA---FHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAV 365
>UNIPROTKB|Q233J3 [details] [associations]
symbol:TTHERM_00391570 "DNA polymerase" species:312017
"Tetrahymena thermophila SB210" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0016035
"zeta DNA polymerase complex" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA]
InterPro:IPR001440 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR011990 InterPro:IPR012337
InterPro:IPR013026 InterPro:IPR017964 InterPro:IPR019734
Pfam:PF00136 Pfam:PF00515 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 Gene3D:1.25.40.10 InterPro:IPR006597
SMART:SM00671 SUPFAM:SSF53098 InterPro:IPR013105 Pfam:PF07719
GO:GO:0003887 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 GO:GO:0016035
EMBL:GG662770 RefSeq:XP_001011832.1 ProteinModelPortal:Q233J3
EnsemblProtists:EAR91587 GeneID:7847176 KEGG:tet:TTHERM_00391570
ProtClustDB:CLSZ2498360 Uniprot:Q233J3
Length = 2315
Score = 137 (53.3 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 71/313 (22%), Positives = 126/313 (40%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD-SA 103
Y G F+ A+ E ++++P + YNT+G + A Y A + P +A
Sbjct: 1835 YQQGKFQDALQKFNESLQINPLQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTA 1894
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L + K +A ++A+ P + + A FY +++A ++YE+
Sbjct: 1895 LLNLGNLYFWDKNMVKEANECFQKALDINPNSLQVLKRAALFYYSNNQFQEAIQNYEKAL 1954
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL---LVAILMENN 220
+ P + + AQ++ + G ++I ILE+ +K +P + DL + ++N
Sbjct: 1955 SIDPQDYEIFGCLAQVYHQIGNIQKAIKILEKAIKQNPRNHQFHY-DLGNYSSEVGLKNE 2013
Query: 221 AYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD 280
A + L +E E L G Y+ + +E+A+ F + D
Sbjct: 2014 AIQCYLNALE-------INPEFYQALNNLGGE-YIFMERLEEAQSCFLKILETYPQDFNA 2065
Query: 281 LITEVADTLMSLGHSNSALKYYH--FLETNAGTD--NGYLYLKLAECYLSLKERAHAIMF 336
LI V + G A Y L N D NG +A+CY +L AI +
Sbjct: 2066 LIQLVV-LCIERGMIEEAKDYLQKCLLNNNLDYDACNG-----IAQCYEALGMIEEAIFW 2119
Query: 337 FYKALDRFEDNID 349
KAL +++D
Sbjct: 2120 CEKALKINPNSVD 2132
>WB|WBGene00003885 [details] [associations]
symbol:osm-5 species:6239 "Caenorhabditis elegans"
[GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0035058 "nonmotile
primary cilium assembly" evidence=IMP] [GO:0031513 "nonmotile
primary cilium" evidence=IDA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0035058
GO:GO:0031513 KO:K16474 OMA:CYRRSGN EMBL:FO081792 EMBL:AF314195
RefSeq:NP_508511.1 UniGene:Cel.19400 ProteinModelPortal:G5ED37
SMR:G5ED37 EnsemblMetazoa:Y41G9A.1 GeneID:180585
KEGG:cel:CELE_Y41G9A.1 CTD:180585 WormBase:Y41G9A.1
GeneTree:ENSGT00390000015473 NextBio:910000 Uniprot:G5ED37
Length = 820
Score = 142 (55.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 48/216 (22%), Positives = 100/216 (46%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+ + ++ Y G+ ++A++ +E + + + +GL A GN + A +F+ +
Sbjct: 477 VNQGNIAYMNGDLDKALNNYREALNNDASCVQALFNIGLTAKAQGNLEQALEFFYKLHGI 536
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+ + QL + D+AQA+ QA P D ++ LA Y + GD +A +
Sbjct: 537 LLNNVQVLVQLASIYESLEDSAQAIELYSQANSLVPNDPAILSKLADLYDQEGDKSQAFQ 596
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILM 217
+ + FP N++ + A +L+ + +SI LE+ + P+ + + ++ + L
Sbjct: 597 CHYDSYRYFPSNLETVEWLASYYLETQFSEKSINYLEKAALMQPNVSKWQM--MIASCLR 654
Query: 218 ENNAYEKTLQHIEHAQIVRFSGKELP-LKLKVK-AG 251
Y++ + + QI R ++L LK V+ AG
Sbjct: 655 RTGNYQRAFEL--YRQIHRKFPQDLDCLKFLVRIAG 688
Score = 37 (18.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 640 KYKDCVPPIIISGHQFTMASHHQDA 664
+Y VP ++ SG FT+A A
Sbjct: 755 QYSAHVPLLLDSGTPFTVAQRDMKA 779
>UNIPROTKB|E1BLX1 [details] [associations]
symbol:IFT88 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060426 "lung vasculature development" evidence=IEA]
[GO:0060411 "cardiac septum morphogenesis" evidence=IEA]
[GO:0060271 "cilium morphogenesis" evidence=IEA] [GO:0048853
"forebrain morphogenesis" evidence=IEA] [GO:0048568 "embryonic
organ development" evidence=IEA] [GO:0045862 "positive regulation
of proteolysis" evidence=IEA] [GO:0045177 "apical part of cell"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0042487 "regulation of odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IEA] [GO:0031512 "motile primary cilium" evidence=IEA]
[GO:0021537 "telencephalon development" evidence=IEA] [GO:0016485
"protein processing" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0005932 "microtubule basal
body" evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
[GO:0003382 "epithelial cell morphogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13174 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0005814 GO:GO:0009952 GO:GO:0001701 GO:GO:0045177
GO:GO:0003382 Gene3D:1.25.40.10 GO:GO:0007368 GO:GO:0005932
GO:GO:0009953 GO:GO:0045862 GO:GO:0042733 GO:GO:0016485
GO:GO:0007224 GO:GO:0032391 GO:GO:0060271 GO:GO:0035085
GO:GO:0042487 GO:GO:0021537 GO:GO:0048568 GO:GO:0060411
GO:GO:0031512 GO:GO:0060426 GO:GO:0048853 OMA:CYRRSGN
GeneTree:ENSGT00390000015473 EMBL:DAAA02033236 EMBL:DAAA02033237
IPI:IPI00696143 UniGene:Bt.36147 ProteinModelPortal:E1BLX1
Ensembl:ENSBTAT00000018980 Uniprot:E1BLX1
Length = 825
Score = 131 (51.2 bits), Expect = 8.3e-05, P = 8.2e-05
Identities = 28/123 (22%), Positives = 62/123 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATK 174
+
Sbjct: 691 CLR 693
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 40/184 (21%), Positives = 79/184 (42%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA- 103
+A G++E+A KE +R + E +GL + L A D + + H ++SA
Sbjct: 496 FANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEALDCF-LKLHAILRNSAQ 554
Query: 104 -LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
L++ + + + D +QAM ++ Q I P D L Y GD +A + Y +
Sbjct: 555 VLYQIANVYELME-DPSQAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYES 613
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAY 222
+ FP N++ + ++ ++I E + P+ + ++ + + Y
Sbjct: 614 YRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQL--MVASCFRRSGNY 671
Query: 223 EKTL 226
+K L
Sbjct: 672 QKAL 675
>UNIPROTKB|Q28G25 [details] [associations]
symbol:bbs4 "Bardet-Biedl syndrome 4 protein homolog"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000242
"pericentriolar material" evidence=ISS] [GO:0003777 "microtubule
motor activity" evidence=ISS] [GO:0051297 "centrosome organization"
evidence=ISS] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0051297 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0000242 GO:GO:0003777 GO:GO:0060170 CTD:585
HOGENOM:HOG000261391 HOVERGEN:HBG024456 KO:K16531 EMBL:CR761609
RefSeq:NP_001016280.1 UniGene:Str.27176 ProteinModelPortal:Q28G25
STRING:Q28G25 GeneID:549034 KEGG:xtr:549034 Xenbase:XB-GENE-952107
Bgee:Q28G25 Uniprot:Q28G25
Length = 516
Score = 128 (50.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 37/156 (23%), Positives = 73/156 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++++ L + L+P + + + LG HK+A + Y AA L+ KD +
Sbjct: 78 GKIQESLELFQTCAVLNPTSSDNLKQVARSLFLLGKHKAAVEVYNEAARLNQKDWEICHN 137
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + D +++ + A++ +D+S I L ++ GD + A +++ Q +L P
Sbjct: 138 LGVCYLFLKDLSKSKEQLTLALQLHRQDLSA-ITLGKIQLQEGDIDGAIQTFTQALQLSP 196
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+N + T L+L+ G ++ L L PS+
Sbjct: 197 ENTELLTTLGLLYLQNGLFQKAFEYLGNALTYDPSN 232
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/92 (21%), Positives = 37/92 (40%)
Query: 595 CAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAK---YKDCVPPIIIS 651
C K L L P+ W +VL +G ++ +++ +L A + ++
Sbjct: 289 CLKRALYLSPFD---W----RVLYNLGLVHLSMQQYASAFHFLSAAISLHHGNAGLYMLL 341
Query: 652 GHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
T ++A Y +A L +PL+NL
Sbjct: 342 AVALTYLDDIENAKSSYQQAASLDQTDPLVNL 373
>UNIPROTKB|Q74A82 [details] [associations]
symbol:GSU2508 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 RefSeq:NP_953554.2 GeneID:2685366 KEGG:gsu:GSU2508
PATRIC:22027865 HOGENOM:HOG000072814 ProtClustDB:CLSK2306806
BioCyc:GSUL243231:GH27-2460-MONOMER Uniprot:Q74A82
Length = 538
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 36/114 (31%), Positives = 50/114 (43%)
Query: 54 ISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
+SL VV P E Y LG A G+ A + A + P+ S QL T A
Sbjct: 398 VSLFASVVETDPRSAEGYFNLGSALIERGDTAGARAAWERAVGIDPRHSGALAQLGTLAA 457
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++GD A A A+ A P ++ R +L Y G+ +AAE YE + P
Sbjct: 458 RQGDLAGAKARYLAAVEANPANVMARYNLGRIYEMQGEPARAAEQYELFLRYVP 511
>TIGR_CMR|GSU_2508 [details] [associations]
symbol:GSU_2508 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 RefSeq:NP_953554.2 GeneID:2685366 KEGG:gsu:GSU2508
PATRIC:22027865 HOGENOM:HOG000072814 ProtClustDB:CLSK2306806
BioCyc:GSUL243231:GH27-2460-MONOMER Uniprot:Q74A82
Length = 538
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 36/114 (31%), Positives = 50/114 (43%)
Query: 54 ISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
+SL VV P E Y LG A G+ A + A + P+ S QL T A
Sbjct: 398 VSLFASVVETDPRSAEGYFNLGSALIERGDTAGARAAWERAVGIDPRHSGALAQLGTLAA 457
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++GD A A A+ A P ++ R +L Y G+ +AAE YE + P
Sbjct: 458 RQGDLAGAKARYLAAVEANPANVMARYNLGRIYEMQGEPARAAEQYELFLRYVP 511
>UNIPROTKB|E1C9K0 [details] [associations]
symbol:CTR9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007259 "JAK-STAT cascade" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0016593 "Cdc73/Paf1
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0070102 "interleukin-6-mediated
signaling pathway" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001711 "endodermal cell fate commitment"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 GO:GO:0045944 GO:GO:0000122
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0080182 GO:GO:0007259 GO:GO:0016593 GO:GO:0045638 CTD:9646
KO:K15176 OMA:TQNDTYS GO:GO:0070102 GO:GO:2001162
GeneTree:ENSGT00390000005097 EMBL:AADN02030593 IPI:IPI00580712
RefSeq:XP_420968.3 UniGene:Gga.54718 Ensembl:ENSGALT00000009016
GeneID:423035 KEGG:gga:423035 Uniprot:E1C9K0
Length = 1167
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 73/313 (23%), Positives = 129/313 (41%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLG---LAHSALGN--HKSAFDFYVIAAHLSPKDSA 103
+ + + LL + P+ P N L G H + F+ +S
Sbjct: 250 SIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEVEAMQAESC 309
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH-LASFYVEIGDYEKAAESYEQI 162
++ +F VQ+ D QA Y QA + L L Y+ GD E A++ +E++
Sbjct: 310 -YQLARSFHVQE-DYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKV 367
Query: 163 QKLFPDNVDATKTGAQLFLKC-GQTARSI--GILEEYLKVHPSDADLSVIDLLVAILMEN 219
K +P+N + K L+ Q R I G L++ + +P D + + I+L A ++E
Sbjct: 368 LKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVE-AWIEL--AQILEQ 424
Query: 220 NAYEKTLQHIEHA-QIVRFSGK-ELPLKLKVKAGICYLRLGNMEKAEILF-ADLQWKNA- 275
+ L A +I++ + ++P ++ G + RLGN+ +A+ F A L A
Sbjct: 425 TDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAE 484
Query: 276 IDHADLITEVAD--TLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
+H + T +L A+ +H E + + +CYL L A
Sbjct: 485 AEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE-KLYKNILREHPNYVDCYLRLGAMARD 543
Query: 334 IMFFYKALDRFED 346
FY+A D F++
Sbjct: 544 KGNFYEASDWFKE 556
>UNIPROTKB|Q6PD62 [details] [associations]
symbol:CTR9 "RNA polymerase-associated protein CTR9
homolog" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016593
"Cdc73/Paf1 complex" evidence=IDA] [GO:0010390 "histone
monoubiquitination" evidence=IDA] [GO:0033523 "histone H2B
ubiquitination" evidence=IDA] [GO:0007259 "JAK-STAT cascade"
evidence=ISS] [GO:0070102 "interleukin-6-mediated signaling
pathway" evidence=ISS] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISS] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IDA]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0035327 "transcriptionally active
chromatin" evidence=ISS] [GO:0001711 "endodermal cell fate
commitment" evidence=ISS] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 EMBL:CH471064 GO:GO:0016055
GO:GO:0016607 GO:GO:0045944 GO:GO:0006351 GO:GO:0071222
GO:GO:0000122 eggNOG:COG0457 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 GO:GO:0019827 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0033523 GO:GO:0010390 GO:GO:0080182
GO:GO:0007259 GO:GO:0016593 GO:GO:0001711 GO:GO:0045638 EMBL:D63875
EMBL:BC058914 IPI:IPI00477468 RefSeq:NP_055448.1 UniGene:Hs.725151
ProteinModelPortal:Q6PD62 SMR:Q6PD62 DIP:DIP-31693N IntAct:Q6PD62
MINT:MINT-1182366 STRING:Q6PD62 PhosphoSite:Q6PD62 DMDM:74758318
PaxDb:Q6PD62 PRIDE:Q6PD62 Ensembl:ENST00000361367 GeneID:9646
KEGG:hsa:9646 UCSC:uc001mja.3 CTD:9646 GeneCards:GC11P010772
HGNC:HGNC:16850 MIM:609366 neXtProt:NX_Q6PD62 PharmGKB:PA134896774
HOGENOM:HOG000246926 HOVERGEN:HBG081372 InParanoid:Q6PD62 KO:K15176
OMA:TQNDTYS OrthoDB:EOG4NKBTV ChiTaRS:CTR9 GenomeRNAi:9646
NextBio:36207 PMAP-CutDB:Q6PD62 Bgee:Q6PD62 CleanEx:HS_CTR9
Genevestigator:Q6PD62 GermOnline:ENSG00000198730 GO:GO:0070102
GO:GO:2001162 Uniprot:Q6PD62
Length = 1173
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 75/313 (23%), Positives = 130/313 (41%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK-- 106
+ + + LL + P+ P N L H S + A + + A+
Sbjct: 250 SIKNGVQLLSRAYTIDPSNPMVLNHLA-NHFFFKKDYSKVQHLALHAFHNTEVEAMQAES 308
Query: 107 --QLL-TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH-LASFYVEIGDYEKAAESYEQI 162
QL +F VQ+ D QA Y QA + L L Y+ GD E A++ +E++
Sbjct: 309 CYQLARSFHVQE-DYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKV 367
Query: 163 QKLFPDNVDATKTGAQLFLKC-GQTARSI--GILEEYLKVHPSDADLSVIDLLVAILMEN 219
K +P+N + K L+ Q R I G L++ + +P D + + I+L A ++E
Sbjct: 368 LKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVE-AWIEL--AQILEQ 424
Query: 220 NAYEKTLQHIEHA-QIVRFSGK-ELPLKLKVKAGICYLRLGNMEKAEILF-ADLQWKNA- 275
+ L A +I++ + ++P ++ G + RLGN+ +A+ F A L A
Sbjct: 425 TDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAE 484
Query: 276 IDHADLITEVAD--TLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
+H + T +L A+ +H E + + +CYL L A
Sbjct: 485 AEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE-KLYKNILREHPNYVDCYLRLGAMARD 543
Query: 334 IMFFYKALDRFED 346
FY+A D F++
Sbjct: 544 KGNFYEASDWFKE 556
>UNIPROTKB|F1S6V3 [details] [associations]
symbol:CTR9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0042169 "SH2 domain binding" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0033523
"histone H2B ubiquitination" evidence=IEA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0007259
"JAK-STAT cascade" evidence=IEA] [GO:0001711 "endodermal cell fate
commitment" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0045944 GO:GO:0071222 GO:GO:0000122
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0019827
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0033523
GO:GO:0010390 GO:GO:0080182 GO:GO:0007259 GO:GO:0016593
GO:GO:0001711 GO:GO:0045638 OMA:TQNDTYS GO:GO:0070102 GO:GO:2001162
GeneTree:ENSGT00390000005097 EMBL:CU606995
Ensembl:ENSSSCT00000014646 Uniprot:F1S6V3
Length = 1173
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 75/313 (23%), Positives = 130/313 (41%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK-- 106
+ + + LL + P+ P N L H S + A + + A+
Sbjct: 250 SIKNGVQLLSRAYTIDPSNPMVLNHLA-NHFFFKKDYSKVQHLALHAFHNTEVEAMQAES 308
Query: 107 --QLL-TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH-LASFYVEIGDYEKAAESYEQI 162
QL +F VQ+ D QA Y QA + L L Y+ GD E A++ +E++
Sbjct: 309 CYQLARSFHVQE-DYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKV 367
Query: 163 QKLFPDNVDATKTGAQLFLKC-GQTARSI--GILEEYLKVHPSDADLSVIDLLVAILMEN 219
K +P+N + K L+ Q R I G L++ + +P D + + I+L A ++E
Sbjct: 368 LKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVE-AWIEL--AQILEQ 424
Query: 220 NAYEKTLQHIEHA-QIVRFSGK-ELPLKLKVKAGICYLRLGNMEKAEILF-ADLQWKNA- 275
+ L A +I++ + ++P ++ G + RLGN+ +A+ F A L A
Sbjct: 425 TDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAE 484
Query: 276 IDHADLITEVAD--TLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
+H + T +L A+ +H E + + +CYL L A
Sbjct: 485 AEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE-KLYKNILREHPNYVDCYLRLGAMARD 543
Query: 334 IMFFYKALDRFED 346
FY+A D F++
Sbjct: 544 KGNFYEASDWFKE 556
>MGI|MGI:109345 [details] [associations]
symbol:Ctr9 "Ctr9, Paf1/RNA polymerase II complex component,
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0001711 "endodermal cell fate
commitment" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007259 "JAK-STAT cascade" evidence=IMP] [GO:0010390 "histone
monoubiquitination" evidence=ISO] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO] [GO:0019827 "stem cell maintenance" evidence=ISO;IMP]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0033523 "histone H2B
ubiquitination" evidence=ISO] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=ISO;IMP] [GO:0070102 "interleukin-6-mediated signaling
pathway" evidence=IMP] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IDA] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO;IMP] [GO:2001162 "positive regulation
of histone H3-K79 methylation" evidence=ISO] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:109345 GO:GO:0016055 GO:GO:0016607 GO:GO:0045944
GO:GO:0006351 GO:GO:0071222 GO:GO:0000122 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0042169 InterPro:IPR013105 Pfam:PF07719
GO:GO:0019827 GO:GO:0035327 GO:GO:0051571 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0080182 GO:GO:0007259
GO:GO:0016593 GO:GO:0001711 GO:GO:0045638 CTD:9646
HOVERGEN:HBG081372 KO:K15176 OMA:TQNDTYS OrthoDB:EOG4NKBTV
ChiTaRS:CTR9 GO:GO:0070102 GO:GO:2001162 EMBL:L49502 EMBL:AK040205
EMBL:AK040331 EMBL:AK045101 EMBL:AK083921 EMBL:AK134990
EMBL:AK148536 EMBL:BC053910 EMBL:BC080719 EMBL:AB093211
IPI:IPI00120919 IPI:IPI00461860 IPI:IPI00742373 PIR:T42719
RefSeq:NP_033457.2 UniGene:Mm.255858 ProteinModelPortal:Q62018
SMR:Q62018 IntAct:Q62018 STRING:Q62018 PhosphoSite:Q62018
PaxDb:Q62018 PRIDE:Q62018 Ensembl:ENSMUST00000005749 GeneID:22083
KEGG:mmu:22083 UCSC:uc009jfw.1 UCSC:uc009jfx.1
GeneTree:ENSGT00390000005097 InParanoid:Q62018 NextBio:301916
Bgee:Q62018 Genevestigator:Q62018 GermOnline:ENSMUSG00000005609
Uniprot:Q62018
Length = 1173
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 75/313 (23%), Positives = 130/313 (41%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK-- 106
+ + + LL + P+ P N L H S + A + + A+
Sbjct: 250 SIKNGVQLLSRAYTIDPSNPMVLNHLA-NHFFFKKDYSKVQHLALHAFHNTEVEAMQAES 308
Query: 107 --QLL-TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH-LASFYVEIGDYEKAAESYEQI 162
QL +F VQ+ D QA Y QA + L L Y+ GD E A++ +E++
Sbjct: 309 CYQLARSFHVQE-DYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKV 367
Query: 163 QKLFPDNVDATKTGAQLFLKC-GQTARSI--GILEEYLKVHPSDADLSVIDLLVAILMEN 219
K +P+N + K L+ Q R I G L++ + +P D + + I+L A ++E
Sbjct: 368 LKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVE-AWIEL--AQILEQ 424
Query: 220 NAYEKTLQHIEHA-QIVRFSGK-ELPLKLKVKAGICYLRLGNMEKAEILF-ADLQWKNA- 275
+ L A +I++ + ++P ++ G + RLGN+ +A+ F A L A
Sbjct: 425 TDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAE 484
Query: 276 IDHADLITEVAD--TLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
+H + T +L A+ +H E + + +CYL L A
Sbjct: 485 AEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE-KLYKNILREHPNYVDCYLRLGAMARD 543
Query: 334 IMFFYKALDRFED 346
FY+A D F++
Sbjct: 544 KGNFYEASDWFKE 556
>UNIPROTKB|G3V897 [details] [associations]
symbol:Ctr9 "SH2 domain binding protein 1
(Tetratricopeptide repeat containing), isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001711 "endodermal cell fate commitment" evidence=IEA]
[GO:0007259 "JAK-STAT cascade" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA] [GO:0035327 "transcriptionally active
chromatin" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0070102 "interleukin-6-mediated signaling
pathway" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
RGD:1311097 EMBL:CH473956 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 CTD:9646 KO:K15176 OMA:TQNDTYS
GeneTree:ENSGT00390000005097 RefSeq:NP_001094131.1
UniGene:Rn.102000 ProteinModelPortal:G3V897
Ensembl:ENSRNOT00000023741 GeneID:293184 KEGG:rno:293184
NextBio:635518 Uniprot:G3V897
Length = 1173
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 75/313 (23%), Positives = 130/313 (41%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK-- 106
+ + + LL + P+ P N L H S + A + + A+
Sbjct: 250 SIKNGVQLLSRAYTIDPSNPMVLNHLA-NHFFFKKDYSKVQHLALHAFHNTEVEAMQAES 308
Query: 107 --QLL-TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH-LASFYVEIGDYEKAAESYEQI 162
QL +F VQ+ D QA Y QA + L L Y+ GD E A++ +E++
Sbjct: 309 CYQLARSFHVQE-DYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKV 367
Query: 163 QKLFPDNVDATKTGAQLFLKC-GQTARSI--GILEEYLKVHPSDADLSVIDLLVAILMEN 219
K +P+N + K L+ Q R I G L++ + +P D + + I+L A ++E
Sbjct: 368 LKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVE-AWIEL--AQILEQ 424
Query: 220 NAYEKTLQHIEHA-QIVRFSGK-ELPLKLKVKAGICYLRLGNMEKAEILF-ADLQWKNA- 275
+ L A +I++ + ++P ++ G + RLGN+ +A+ F A L A
Sbjct: 425 TDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAE 484
Query: 276 IDHADLITEVAD--TLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
+H + T +L A+ +H E + + +CYL L A
Sbjct: 485 AEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE-KLYKNILREHPNYVDCYLRLGAMARD 543
Query: 334 IMFFYKALDRFED 346
FY+A D F++
Sbjct: 544 KGNFYEASDWFKE 556
>ZFIN|ZDB-GENE-030131-9631 [details] [associations]
symbol:ogt.1 "O-linked N-acetylglucosamine
(GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl
transferase) 1" species:7955 "Danio rerio" [GO:0016262 "protein
N-acetylglucosaminyltransferase activity" evidence=IMP;IDA]
[GO:0006493 "protein O-linked glycosylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
ZFIN:ZDB-GENE-030131-9631 GO:GO:0006493 Gene3D:1.25.40.10
GO:GO:0016262 HOGENOM:HOG000003765 KO:K09667 HOVERGEN:HBG000351
UniGene:Dr.105209 EMBL:AY696178 IPI:IPI00486762
RefSeq:NP_001017359.1 ProteinModelPortal:Q5GA13 SMR:Q5GA13
STRING:Q5GA13 GeneID:337685 KEGG:dre:337685 CTD:337685
InParanoid:Q5GA13 NextBio:20812366 ArrayExpress:Q5GA13
Uniprot:Q5GA13
Length = 1062
Score = 128 (50.1 bits), Expect = 0.00024, P = 0.00024
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A GN A + Y A L P
Sbjct: 266 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPT 325
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 326 HADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 385
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 386 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 430
Score = 126 (49.4 bits), Expect = 0.00039, P = 0.00039
Identities = 47/193 (24%), Positives = 80/193 (41%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G AI ++ V L PN + Y LG A Y+ A LSP + +
Sbjct: 203 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L ++G A+ R+AI +P +LA+ E G+ +A E Y +L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P + D+ A + + G ++ + + L+V P A + L ++L + ++
Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFA--AAHSNLASVLQQQGKLQEA 380
Query: 226 LQHIEHAQIVRFS 238
L H + A +R S
Sbjct: 381 LMHYKEA--IRIS 391
>ZFIN|ZDB-GENE-060126-2 [details] [associations]
symbol:bbs4 "Bardet-Biedl syndrome 4" species:7955
"Danio rerio" [GO:0051877 "pigment granule aggregation in cell
center" evidence=IMP] [GO:0032402 "melanosome transport"
evidence=IGI;IMP] [GO:0046907 "intracellular transport"
evidence=IMP] [GO:0042384 "cilium assembly" evidence=IMP]
[GO:0070121 "Kupffer's vesicle development" evidence=IGI;IMP]
[GO:0005622 "intracellular" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0046154 "rhodopsin metabolic process"
evidence=IGI;IMP] [GO:0090245 "axis elongation involved in
somitogenesis" evidence=IGI;IMP] [GO:0035845 "photoreceptor cell
outer segment organization" evidence=IGI;IMP] [GO:0061371
"determination of heart left/right asymmetry" evidence=IGI;IMP]
[GO:0007368 "determination of left/right symmetry" evidence=IGI]
[GO:0060026 "convergent extension" evidence=IGI;IMP] [GO:0060027
"convergent extension involved in gastrulation" evidence=IMP]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
ZFIN:ZDB-GENE-060126-2 GO:GO:0005622 Gene3D:1.25.40.10
GO:GO:0042384 GO:GO:0001947 GO:GO:0070121 GO:GO:0035845
GO:GO:0046907 GO:GO:0046154 GO:GO:0032402 GO:GO:0060027
GO:GO:0051877 GeneTree:ENSGT00530000063455 GO:GO:0090245
EMBL:BX957346 IPI:IPI00609931 Ensembl:ENSDART00000122929
Uniprot:E7EXH4
Length = 528
Score = 127 (49.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 59/306 (19%), Positives = 127/306 (41%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+A + G ++++ L + ++P + + + LG HK+A + Y AA L+
Sbjct: 73 QALIMRLEGKIQESLELFQSCAIINPTSSDNLKQVARSLFLLGKHKAAIEVYNEAARLNQ 132
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
KD + L + D A + A++ D++ + L ++ GD EKA + Y
Sbjct: 133 KDWEISHNLGVCYIYTKDFRSAEEQLNLALQLNKHDLTYMM-LGKIHLLQGDTEKAIDVY 191
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN 219
+ + P+N + T L+++ G+ ++ L L P++ I +++ +
Sbjct: 192 KSAVEFSPENTELLTTLGLLYMQLGKYQKAFEHLGNALTYDPNN--FKAILAAGSMMQTH 249
Query: 220 NAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHA 279
Y+ + ++ ++ E P L G+C+ +K + L+ N +
Sbjct: 250 GDYDVAMNKY---RVAAYAVPESP-PLWNNIGMCFF---GKKKYVAAISCLKRANYLSPF 302
Query: 280 D--LITEVADTLMSLGHSNSALKYYHFLET--NAGTDNGYLYLKLAECYLSLKERAHAIM 335
D ++ + +++ SA +HFL N LY+ LA +L + +A
Sbjct: 303 DWKILYNLGLVHLTMQQFASA---FHFLSAAINLRPRMSELYMLLAVALTNLDDAENARR 359
Query: 336 FFYKAL 341
+ +A+
Sbjct: 360 SYEQAV 365
Score = 42 (19.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 662 QDAARCYLEAYKLLPENPLINL 683
++A R Y +A ++ +PL+NL
Sbjct: 355 ENARRSYEQAVQIDESSPLVNL 376
>FB|FBgn0033578 [details] [associations]
symbol:BBS4 "BBS4" species:7227 "Drosophila melanogaster"
[GO:0042384 "cilium assembly" evidence=ISM;IEP] [GO:0000242
"pericentriolar material" evidence=ISS] [GO:0051297 "centrosome
organization" evidence=ISS] [GO:0003777 "microtubule motor
activity" evidence=ISS] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:AE013599 GO:GO:0051297 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0042384 InterPro:IPR013105 Pfam:PF07719 GO:GO:0000242
GO:GO:0003777 GO:GO:0060170 CTD:585 GeneTree:ENSGT00530000063455
KO:K16531 OMA:YNQGEKR RefSeq:NP_610636.1 UniGene:Dm.23910
ProteinModelPortal:A1Z8E9 SMR:A1Z8E9 STRING:A1Z8E9 PRIDE:A1Z8E9
EnsemblMetazoa:FBtr0088202 GeneID:36167 KEGG:dme:Dmel_CG13232
FlyBase:FBgn0033578 InParanoid:A1Z8E9 OrthoDB:EOG4TX97J
PhylomeDB:A1Z8E9 GenomeRNAi:36167 NextBio:797148 Bgee:A1Z8E9
Uniprot:A1Z8E9
Length = 486
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 71/312 (22%), Positives = 131/312 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-DSALWK 106
GN +A+ L++ L+P ETY +G +G A + A S + D ++
Sbjct: 81 GNHIEALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFREAEQRSSRQDHEIYH 140
Query: 107 ---QLL----TFAVQKGDTAQ----AMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+LL T QK +Q A Y A+++ K + + LA Y + Y+KA
Sbjct: 141 YLGELLYRAATTQSQKDVASQQQDEARTYFELAVQSGRK-LESYVRLAELYRKDKQYQKA 199
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
E E L P+N + + L+LK +T ++ L E + + + ++ AI
Sbjct: 200 IEILENCLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIERKCSPKGLL-AFGAI 258
Query: 216 LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLR-------LGNMEKAEILFA 268
L N + L +++QI + E+ +L G+C+ + + ++ K+ + +
Sbjct: 259 LQSRNDIDGALS--KYSQIAN-AEPEIA-ELWNNIGLCFFKKQKFIVAISSLRKS-VWLS 313
Query: 269 DLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLK 328
L + NA+ + LI ++ S H+ +A N DN Y+ L C L
Sbjct: 314 PLNY-NALYNLSLIYIASEQYASAFHTLAAA-------INLRKDNAECYMLLGLCLRKLD 365
Query: 329 ERAHAIMFFYKA 340
+ +A + +A
Sbjct: 366 DMENAFVALERA 377
>UNIPROTKB|F1NX56 [details] [associations]
symbol:OGT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000123 "histone acetyltransferase complex"
evidence=IEA] [GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006110 "regulation
of glycolysis" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0008047 "enzyme activator activity" evidence=IEA]
[GO:0030854 "positive regulation of granulocyte differentiation"
evidence=IEA] [GO:0032868 "response to insulin stimulus"
evidence=IEA] [GO:0035020 "regulation of Rac protein signal
transduction" evidence=IEA] [GO:0043995 "histone acetyltransferase
activity (H4-K5 specific)" evidence=IEA] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0046626 "regulation of insulin receptor signaling pathway"
evidence=IEA] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IEA] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0070688 "MLL5-L complex" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0005886 GO:GO:0005813 GO:GO:0006917 GO:GO:0071300
GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688 GO:GO:0005547
GO:GO:0035020 GO:GO:0048015 GO:GO:0045862 GO:GO:0008047
GO:GO:0051571 GO:GO:0000123 GO:GO:0030854 GO:GO:0046626
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00550000074327 KO:K09667 OMA:LAYMPNT CTD:8473
EMBL:AADN02013225 EMBL:AADN02013226 IPI:IPI00603062
RefSeq:XP_001232519.1 UniGene:Gga.4064 ProteinModelPortal:F1NX56
PRIDE:F1NX56 Ensembl:ENSGALT00000008713 GeneID:422203
KEGG:gga:422203 NextBio:20824871 ArrayExpress:F1NX56 Uniprot:F1NX56
Length = 1035
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 47/193 (24%), Positives = 79/193 (40%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G AI ++ V L PN + Y LG A Y+ A LSP + +
Sbjct: 193 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L ++G A+ R+AI +P +LA+ E G +A E Y +L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRL 312
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P + D+ A + + G ++ + + L+V P A + L ++L + ++
Sbjct: 313 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFA--AAHSNLASVLQQQGKLQEA 370
Query: 226 LQHIEHAQIVRFS 238
L H + A +R S
Sbjct: 371 LMHYKEA--IRIS 381
>UNIPROTKB|A5D7G1 [details] [associations]
symbol:OGT "OGT protein" species:9913 "Bos taurus"
[GO:0071300 "cellular response to retinoic acid" evidence=IEA]
[GO:0070688 "MLL5-L complex" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=IEA] [GO:0046972
"histone acetyltransferase activity (H4-K16 specific)"
evidence=IEA] [GO:0046626 "regulation of insulin receptor signaling
pathway" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0043996 "histone acetyltransferase
activity (H4-K8 specific)" evidence=IEA] [GO:0043995 "histone
acetyltransferase activity (H4-K5 specific)" evidence=IEA]
[GO:0035020 "regulation of Rac protein signal transduction"
evidence=IEA] [GO:0032868 "response to insulin stimulus"
evidence=IEA] [GO:0030854 "positive regulation of granulocyte
differentiation" evidence=IEA] [GO:0008047 "enzyme activator
activity" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA]
[GO:0000123 "histone acetyltransferase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005886 GO:GO:0005813 GO:GO:0006917
GO:GO:0071300 GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688
GO:GO:0005547 GO:GO:0035020 GO:GO:0048015 GO:GO:0045862
GO:GO:0008047 GO:GO:0051571 GO:GO:0000123 GO:GO:0030854
GO:GO:0046626 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996 CAZy:GT41
eggNOG:COG3914 GeneTree:ENSGT00550000074327 HOGENOM:HOG000003765
KO:K09667 OMA:LAYMPNT CTD:8473 HOVERGEN:HBG000351 OrthoDB:EOG4HQDHJ
EMBL:DAAA02072838 EMBL:DAAA02072839 EMBL:DAAA02072840 EMBL:BC140542
IPI:IPI00840256 RefSeq:NP_001091539.1 UniGene:Bt.102182 SMR:A5D7G1
STRING:A5D7G1 Ensembl:ENSBTAT00000045447 GeneID:532053
KEGG:bta:532053 NextBio:20875591 Uniprot:A5D7G1
Length = 1036
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A G+ A D Y A L P
Sbjct: 256 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 315
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 316 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 375
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 376 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 420
>RGD|62060 [details] [associations]
symbol:Ogt "O-linked N-acetylglucosamine (GlcNAc) transferase"
species:10116 "Rattus norvegicus" [GO:0000123 "histone
acetyltransferase complex" evidence=IEA;ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO;ISS] [GO:0006110 "regulation of glycolysis"
evidence=IEA;ISO;ISS] [GO:0006493 "protein O-linked glycosylation"
evidence=ISO;IDA] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO;ISS] [GO:0008047 "enzyme activator activity"
evidence=IEA;ISO] [GO:0016262 "protein
N-acetylglucosaminyltransferase activity" evidence=ISO;IDA]
[GO:0030854 "positive regulation of granulocyte differentiation"
evidence=IEA;ISO] [GO:0032868 "response to insulin stimulus"
evidence=IEA;ISO] [GO:0035020 "regulation of Rac protein signal
transduction" evidence=IEA;ISO] [GO:0042277 "peptide binding"
evidence=IDA] [GO:0043085 "positive regulation of catalytic
activity" evidence=ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA;ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=IEA;ISO;ISS]
[GO:0045862 "positive regulation of proteolysis"
evidence=IEA;ISO;ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046626 "regulation of insulin receptor signaling pathway"
evidence=IEA;ISO] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IEA;ISO;ISS] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=IEA;ISO;ISS]
[GO:0048029 "monosaccharide binding" evidence=IDA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA;ISO]
[GO:0070207 "protein homotrimerization" evidence=IDA] [GO:0070688
"MLL5-L complex" evidence=IEA;ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA;ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 UniPathway:UPA00378 RGD:62060 GO:GO:0005829
GO:GO:0005886 GO:GO:0005813 GO:GO:0006917 GO:GO:0006110
GO:GO:0048029 GO:GO:0071300 GO:GO:0006493 GO:GO:0032868
GO:GO:0042277 Gene3D:1.25.40.10 GO:GO:0070688 GO:GO:0005547
GO:GO:0035020 GO:GO:0048015 GO:GO:0070207 GO:GO:0045862
GO:GO:0008047 GO:GO:0016262 GO:GO:0051571 GO:GO:0000123
GO:GO:0030854 GO:GO:0043981 GO:GO:0043982 GO:GO:0046626
GO:GO:0043984 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996 CAZy:GT41
eggNOG:COG3914 HOGENOM:HOG000003765 KO:K09667 CTD:8473
HOVERGEN:HBG000351 OrthoDB:EOG4HQDHJ EMBL:U76557 IPI:IPI00231503
PIR:T31673 RefSeq:NP_058803.2 UniGene:Rn.82705
ProteinModelPortal:P56558 SMR:P56558 STRING:P56558
PhosphoSite:P56558 PRIDE:P56558 GeneID:26295 KEGG:rno:26295
UCSC:RGD:62060 InParanoid:P56558 BRENDA:2.4.1.94 NextBio:608004
Genevestigator:P56558 GermOnline:ENSRNOG00000003359 Uniprot:P56558
Length = 1036
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A G+ A D Y A L P
Sbjct: 256 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 315
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 316 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 375
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 376 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 420
>UNIPROTKB|Q5LPE5 [details] [associations]
symbol:SPO2903 "TPR/sulfotransferase domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016740
Gene3D:1.25.40.10 RefSeq:YP_168111.1 ProteinModelPortal:Q5LPE5
GeneID:3193569 KEGG:sil:SPO2903 PATRIC:23379231 OMA:WASARIH
Uniprot:Q5LPE5
Length = 582
Score = 122 (48.0 bits), Expect = 0.00049, P = 0.00049
Identities = 58/277 (20%), Positives = 118/277 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F L + ++L+ P N +A S LG K+A + +A L+P +
Sbjct: 15 GDFRTVQKLARRALKLAKGDPGWLNLAAIAESGLGRPKAALPHFQLALKLAPDFHDARRN 74
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L V G +A +++Q P+D L+ + GD + A + ++ L P
Sbjct: 75 LAQTLVILGRLDEAERHLQQLTGTNPQDAEAWALLSQAAMGRGDGDAALAAADRYVDLRP 134
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
A L + G A ++ L++ P + +DLL+A+ + +
Sbjct: 135 GQARGLMLRATLHGRLGDEAAALADLQQAQMAEPDN-----VDLLIALSLPLARADHPGA 189
Query: 228 HIEHAQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVA 286
I+ A+ V + + +P +L + + ++ G+ + A+ ++ + + A D A+ + ++A
Sbjct: 190 AIDVARRAVELAPRHIPARLTL--AMRHVEQGDSDAAKAMYHRVL-EIAPDQAEALEQLA 246
Query: 287 DTLMSLGHSNSALKYYHFLET-NAGT-DNGYLYLKLA 321
+ + A + L+T AG+ D L+ LA
Sbjct: 247 HLNDAAENQRLAPQVQTALKTAEAGSLDKAQLHFALA 283
>TIGR_CMR|SPO_2903 [details] [associations]
symbol:SPO_2903 "TPR/sulfotransferase domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008146
"sulfotransferase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016740
Gene3D:1.25.40.10 RefSeq:YP_168111.1 ProteinModelPortal:Q5LPE5
GeneID:3193569 KEGG:sil:SPO2903 PATRIC:23379231 OMA:WASARIH
Uniprot:Q5LPE5
Length = 582
Score = 122 (48.0 bits), Expect = 0.00049, P = 0.00049
Identities = 58/277 (20%), Positives = 118/277 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F L + ++L+ P N +A S LG K+A + +A L+P +
Sbjct: 15 GDFRTVQKLARRALKLAKGDPGWLNLAAIAESGLGRPKAALPHFQLALKLAPDFHDARRN 74
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L V G +A +++Q P+D L+ + GD + A + ++ L P
Sbjct: 75 LAQTLVILGRLDEAERHLQQLTGTNPQDAEAWALLSQAAMGRGDGDAALAAADRYVDLRP 134
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
A L + G A ++ L++ P + +DLL+A+ + +
Sbjct: 135 GQARGLMLRATLHGRLGDEAAALADLQQAQMAEPDN-----VDLLIALSLPLARADHPGA 189
Query: 228 HIEHAQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVA 286
I+ A+ V + + +P +L + + ++ G+ + A+ ++ + + A D A+ + ++A
Sbjct: 190 AIDVARRAVELAPRHIPARLTL--AMRHVEQGDSDAAKAMYHRVL-EIAPDQAEALEQLA 246
Query: 287 DTLMSLGHSNSALKYYHFLET-NAGT-DNGYLYLKLA 321
+ + A + L+T AG+ D L+ LA
Sbjct: 247 HLNDAAENQRLAPQVQTALKTAEAGSLDKAQLHFALA 283
>UNIPROTKB|E2QSQ5 [details] [associations]
symbol:OGT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0070688 "MLL5-L complex" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=IEA] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IEA] [GO:0046626 "regulation of insulin
receptor signaling pathway" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=IEA]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=IEA] [GO:0035020 "regulation of Rac protein signal
transduction" evidence=IEA] [GO:0032868 "response to insulin
stimulus" evidence=IEA] [GO:0030854 "positive regulation of
granulocyte differentiation" evidence=IEA] [GO:0008047 "enzyme
activator activity" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA]
[GO:0000123 "histone acetyltransferase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005886 GO:GO:0005813 GO:GO:0006917
GO:GO:0071300 GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688
GO:GO:0005547 GO:GO:0035020 GO:GO:0048015 GO:GO:0045862
GO:GO:0008047 GO:GO:0051571 GO:GO:0000123 GO:GO:0030854
GO:GO:0046626 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00550000074327 KO:K09667 OMA:LAYMPNT CTD:8473
EMBL:AAEX03026488 RefSeq:XP_849392.1 Ensembl:ENSCAFT00000027149
GeneID:480955 KEGG:cfa:480955 NextBio:20855858 Uniprot:E2QSQ5
Length = 1046
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A G+ A D Y A L P
Sbjct: 266 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 325
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 326 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 385
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 386 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 430
>UNIPROTKB|O15294 [details] [associations]
symbol:OGT "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit" species:9606 "Homo
sapiens" [GO:0006915 "apoptotic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016262 "protein
N-acetylglucosaminyltransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IDA] [GO:0006493 "protein
O-linked glycosylation" evidence=IMP;IDA] [GO:0070688 "MLL5-L
complex" evidence=IDA] [GO:0043984 "histone H4-K16 acetylation"
evidence=IDA] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA] [GO:0043981 "histone H4-K5
acetylation" evidence=IDA] [GO:0043995 "histone acetyltransferase
activity (H4-K5 specific)" evidence=IDA] [GO:0043982 "histone H4-K8
acetylation" evidence=IDA] [GO:0043996 "histone acetyltransferase
activity (H4-K8 specific)" evidence=IDA] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=IDA] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0035020 "regulation
of Rac protein signal transduction" evidence=IDA] [GO:0032868
"response to insulin stimulus" evidence=IDA] [GO:0046626
"regulation of insulin receptor signaling pathway" evidence=IDA]
[GO:0006917 "induction of apoptosis" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IMP] [GO:0006110 "regulation of
glycolysis" evidence=IDA] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0007584 "response to nutrient" evidence=TAS]
[GO:0008375 "acetylglucosaminyltransferase activity" evidence=TAS]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IDA] [GO:0008047 "enzyme activator activity" evidence=IDA]
[GO:0030854 "positive regulation of granulocyte differentiation"
evidence=IMP] [GO:0071300 "cellular response to retinoic acid"
evidence=IMP] [GO:0043085 "positive regulation of catalytic
activity" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
UniPathway:UPA00378 PDB:3TAX GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005813 GO:GO:0006915 GO:GO:0006917
GO:GO:0006110 GO:GO:0048029 GO:GO:0071300 GO:GO:0007584
GO:GO:0006493 GO:GO:0032868 GO:GO:0042277 Gene3D:1.25.40.10
GO:GO:0070688 GO:GO:0005547 GO:GO:0035020 GO:GO:0048015
GO:GO:0070207 GO:GO:0045862 GO:GO:0008047 GO:GO:0016262
GO:GO:0051571 GO:GO:0000123 GO:GO:0030854 PDB:3PE4 PDB:4GYW
PDB:4GYY PDB:4GZ3 PDBsum:3PE4 PDBsum:3TAX PDBsum:4GYW PDBsum:4GYY
PDBsum:4GZ3 GO:GO:0043981 GO:GO:0043982 GO:GO:0046626 GO:GO:0043984
CAZy:GT41 eggNOG:COG3914 HOGENOM:HOG000003765 KO:K09667 OMA:LAYMPNT
EMBL:U77413 EMBL:AJ315767 EMBL:AL050366 EMBL:AL833085 EMBL:BX537844
EMBL:BC014434 EMBL:BC038180 IPI:IPI00005780 IPI:IPI00219856
IPI:IPI00607723 IPI:IPI01008950 RefSeq:NP_858058.1
RefSeq:NP_858059.1 UniGene:Hs.405410 PDB:1W3B PDB:3PE3 PDB:4AY5
PDB:4AY6 PDB:4GZ5 PDB:4GZ6 PDBsum:1W3B PDBsum:3PE3 PDBsum:4AY5
PDBsum:4AY6 PDBsum:4GZ5 PDBsum:4GZ6 ProteinModelPortal:O15294
SMR:O15294 DIP:DIP-33491N IntAct:O15294 MINT:MINT-2998811
STRING:O15294 PhosphoSite:O15294 PaxDb:O15294 PRIDE:O15294
DNASU:8473 Ensembl:ENST00000373701 Ensembl:ENST00000373719
GeneID:8473 KEGG:hsa:8473 UCSC:uc004eaa.2 UCSC:uc004eab.2 CTD:8473
GeneCards:GC0XP070752 HGNC:HGNC:8127 HPA:CAB034099 HPA:HPA030751
HPA:HPA030752 MIM:300255 neXtProt:NX_O15294 PharmGKB:PA31914
HOVERGEN:HBG000351 InParanoid:O15294 OrthoDB:EOG4HQDHJ
PhylomeDB:O15294 BioCyc:MetaCyc:ENSG00000147162-MONOMER
SABIO-RK:O15294 BindingDB:O15294 ChEMBL:CHEMBL5955
EvolutionaryTrace:O15294 GenomeRNAi:8473 NextBio:31706
ArrayExpress:O15294 Bgee:O15294 CleanEx:HS_OGT
Genevestigator:O15294 GermOnline:ENSG00000147162 Uniprot:O15294
Length = 1046
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A G+ A D Y A L P
Sbjct: 266 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 325
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 326 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 385
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 386 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 430
>UNIPROTKB|F1RSV2 [details] [associations]
symbol:OGT "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0070688 "MLL5-L complex" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=IEA] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IEA] [GO:0046626 "regulation of insulin
receptor signaling pathway" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=IEA]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=IEA] [GO:0035020 "regulation of Rac protein signal
transduction" evidence=IEA] [GO:0032868 "response to insulin
stimulus" evidence=IEA] [GO:0030854 "positive regulation of
granulocyte differentiation" evidence=IEA] [GO:0008047 "enzyme
activator activity" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA]
[GO:0000123 "histone acetyltransferase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005886 GO:GO:0005813 GO:GO:0006917
GO:GO:0071300 GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688
GO:GO:0005547 GO:GO:0035020 GO:GO:0048015 GO:GO:0045862
GO:GO:0008047 GO:GO:0051571 GO:GO:0000123 GO:GO:0030854
GO:GO:0046626 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00550000074327 OMA:LAYMPNT EMBL:FP015848
Ensembl:ENSSSCT00000013561 Ensembl:ENSSSCT00000032783
Uniprot:F1RSV2
Length = 1046
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A G+ A D Y A L P
Sbjct: 266 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 325
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 326 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 385
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 386 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 430
>UNIPROTKB|Q27HV0 [details] [associations]
symbol:OGT "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit" species:9823 "Sus
scrofa" [GO:0006110 "regulation of glycolysis" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0016262 "protein N-acetylglucosaminyltransferase
activity" evidence=ISS] [GO:0000123 "histone acetyltransferase
complex" evidence=ISS] [GO:0046972 "histone acetyltransferase
activity (H4-K16 specific)" evidence=ISS] [GO:0043995 "histone
acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043984 "histone H4-K16 acetylation" evidence=ISS] [GO:0043982
"histone H4-K8 acetylation" evidence=ISS] [GO:0043981 "histone
H4-K5 acetylation" evidence=ISS] [GO:0006917 "induction of
apoptosis" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate
binding" evidence=ISS] [GO:0048015 "phosphatidylinositol-mediated
signaling" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045862 "positive
regulation of proteolysis" evidence=ISS] [GO:0006493 "protein
O-linked glycosylation" evidence=ISS] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
UniPathway:UPA00378 GO:GO:0005829 GO:GO:0005886 GO:GO:0006917
GO:GO:0006110 GO:GO:0006493 Gene3D:1.25.40.10 GO:GO:0005547
GO:GO:0048015 GO:GO:0045862 HSSP:P07213 GO:GO:0016262 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 CAZy:GT41 eggNOG:COG3914
HOGENOM:HOG000003765 KO:K09667 CTD:8473 HOVERGEN:HBG000351
OrthoDB:EOG4HQDHJ EMBL:DQ400859 RefSeq:NP_001034837.1
UniGene:Ssc.27417 ProteinModelPortal:Q27HV0 SMR:Q27HV0
STRING:Q27HV0 GeneID:664652 KEGG:ssc:664652 Uniprot:Q27HV0
Length = 1046
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A G+ A D Y A L P
Sbjct: 266 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 325
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 326 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 385
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 386 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 430
>UNIPROTKB|P81436 [details] [associations]
symbol:OGT "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit" species:9986
"Oryctolagus cuniculus" [GO:0000123 "histone acetyltransferase
complex" evidence=ISS] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0006110 "regulation
of glycolysis" evidence=ISS] [GO:0006493 "protein O-linked
glycosylation" evidence=ISS] [GO:0006917 "induction of apoptosis"
evidence=ISS] [GO:0016262 "protein N-acetylglucosaminyltransferase
activity" evidence=ISS] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043984 "histone H4-K16 acetylation" evidence=ISS] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
UniPathway:UPA00378 GO:GO:0005886 GO:GO:0005737 GO:GO:0005813
GO:GO:0006917 GO:GO:0006110 GO:GO:0071300 GO:GO:0006493
GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688 GO:GO:0005547
GO:GO:0035020 GO:GO:0048015 GO:GO:0045862 GO:GO:0008047
GO:GO:0016262 GO:GO:0051571 GO:GO:0000123 GO:GO:0030854
GO:GO:0043981 GO:GO:0043982 GO:GO:0046626 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996 eggNOG:COG3914
GeneTree:ENSGT00550000074327 OMA:LAYMPNT CTD:8473
RefSeq:XP_002720149.1 ProteinModelPortal:P81436 STRING:P81436
Ensembl:ENSOCUT00000016973 GeneID:100354727 Uniprot:P81436
Length = 1046
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A G+ A D Y A L P
Sbjct: 266 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 325
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 326 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 385
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 386 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 430
>MGI|MGI:1339639 [details] [associations]
symbol:Ogt "O-linked N-acetylglucosamine (GlcNAc)
transferase
(UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl
transferase)" species:10090 "Mus musculus" [GO:0000123 "histone
acetyltransferase complex" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding"
evidence=ISO] [GO:0005622 "intracellular" evidence=TAS] [GO:0005634
"nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006110 "regulation of glycolysis" evidence=ISO]
[GO:0006493 "protein O-linked glycosylation"
evidence=ISO;ISS;IDA;TAS] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008047 "enzyme activator activity" evidence=ISO]
[GO:0008080 "N-acetyltransferase activity" evidence=TAS]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016262 "protein N-acetylglucosaminyltransferase
activity" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=IEA] [GO:0030854 "positive regulation of granulocyte
differentiation" evidence=ISO] [GO:0032868 "response to insulin
stimulus" evidence=ISO] [GO:0035020 "regulation of Rac protein
signal transduction" evidence=ISO] [GO:0042277 "peptide binding"
evidence=ISO] [GO:0043085 "positive regulation of catalytic
activity" evidence=ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO] [GO:0043982 "histone H4-K8 acetylation" evidence=ISO]
[GO:0043984 "histone H4-K16 acetylation" evidence=ISO] [GO:0045862
"positive regulation of proteolysis" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046626 "regulation of insulin receptor
signaling pathway" evidence=ISO] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=ISO] [GO:0048029
"monosaccharide binding" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0070207
"protein homotrimerization" evidence=ISO] [GO:0070688 "MLL5-L
complex" evidence=ISO] [GO:0071300 "cellular response to retinoic
acid" evidence=ISO] [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISO] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 UniPathway:UPA00378 MGI:MGI:1339639
GO:GO:0005829 GO:GO:0005886 GO:GO:0005813 GO:GO:0006917
GO:GO:0006110 GO:GO:0048029 GO:GO:0071300 GO:GO:0006493
GO:GO:0032868 GO:GO:0042277 Gene3D:1.25.40.10 GO:GO:0070688
GO:GO:0005547 GO:GO:0035020 GO:GO:0048015 GO:GO:0070207
GO:GO:0045862 GO:GO:0008047 GO:GO:0008080 GO:GO:0016262
GO:GO:0051571 GO:GO:0000123 GO:GO:0030854 GO:GO:0043981
GO:GO:0043982 GO:GO:0046626 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:O15294 CAZy:GT41 eggNOG:COG3914
GeneTree:ENSGT00550000074327 HOGENOM:HOG000003765 KO:K09667
CTD:8473 HOVERGEN:HBG000351 OrthoDB:EOG4HQDHJ EMBL:AF539527
EMBL:AF363030 EMBL:AL806534 EMBL:AL805980 EMBL:BC057319
EMBL:AK047095 IPI:IPI00420870 IPI:IPI00845528 RefSeq:NP_631883.2
UniGene:Mm.259191 ProteinModelPortal:Q8CGY8 SMR:Q8CGY8
IntAct:Q8CGY8 STRING:Q8CGY8 PaxDb:Q8CGY8 PRIDE:Q8CGY8
Ensembl:ENSMUST00000044475 Ensembl:ENSMUST00000119299 GeneID:108155
KEGG:mmu:108155 UCSC:uc009tyc.2 UCSC:uc009tyd.2 InParanoid:Q8CGY8
ChiTaRS:OGT NextBio:360182 Bgee:Q8CGY8 Genevestigator:Q8CGY8
Uniprot:Q8CGY8
Length = 1046
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI + + L P+ P+ Y L A G+ A D Y A L P
Sbjct: 266 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 325
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G+ +A+ R+A+ P+ + +LAS + G ++A Y+
Sbjct: 326 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 385
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + ++ ++++P+ AD
Sbjct: 386 EAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 430
>UNIPROTKB|F1NGP6 [details] [associations]
symbol:BBS4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000242 "pericentriolar material" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0001895 "retina
homeostasis" evidence=IEA] [GO:0003085 "negative regulation of
systemic arterial blood pressure" evidence=IEA] [GO:0003777
"microtubule motor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0007608 "sensory perception of
smell" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] [GO:0031513 "nonmotile primary cilium"
evidence=IEA] [GO:0032465 "regulation of cytokinesis" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0034451
"centriolar satellite" evidence=IEA] [GO:0034452 "dynactin binding"
evidence=IEA] [GO:0034454 "microtubule anchoring at centrosome"
evidence=IEA] [GO:0034464 "BBSome" evidence=IEA] [GO:0035058
"nonmotile primary cilium assembly" evidence=IEA] [GO:0038108
"negative regulation of appetite by leptin-mediated signaling
pathway" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0045724 "positive regulation of
cilium assembly" evidence=IEA] [GO:0046548 "retinal rod cell
development" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048854 "brain morphogenesis" evidence=IEA]
[GO:0051297 "centrosome organization" evidence=IEA] [GO:0051457
"maintenance of protein location in nucleus" evidence=IEA]
[GO:0060170 "cilium membrane" evidence=IEA] [GO:0060296 "regulation
of cilium beat frequency involved in ciliary motility"
evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005634 GO:GO:0005814 GO:GO:0051297
GO:GO:0040018 GO:GO:0019216 Gene3D:1.25.40.10 GO:GO:0010629
GO:GO:0005932 GO:GO:0000242 GO:GO:0045444 GO:GO:0034451
GO:GO:0033205 GO:GO:0003777 GO:GO:0051457 GO:GO:0060170
GO:GO:0034464 GO:GO:0038108 GO:GO:0060296
GeneTree:ENSGT00530000063455 OMA:YNQGEKR GO:GO:0031513
GO:GO:0034454 GO:GO:0045724 GO:GO:0032465 EMBL:AADN02051054
IPI:IPI00570730 Ensembl:ENSGALT00000002774 Uniprot:F1NGP6
Length = 511
Score = 121 (47.7 bits), Expect = 0.00052, P = 0.00052
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
L S+ A+G+++ A+S + VV P P +N +G+ + +A A +L
Sbjct: 218 LAAGSMMQAHGDYDVALSKYRAVVSSMPESPPLWNNIGMCFFGKKKYVAAISCLKRANYL 277
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P D + L + A A +++ AI +PK L + LA + D E A
Sbjct: 278 APFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKR 337
Query: 158 SYEQ 161
SYEQ
Sbjct: 338 SYEQ 341
>UNIPROTKB|Q74BQ4 [details] [associations]
symbol:GSU1987 "TPR domain lipoprotein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR014266 TIGRFAMs:TIGR02917
RefSeq:NP_953036.2 GeneID:2686148 KEGG:gsu:GSU1987 PATRIC:22026837
HOGENOM:HOG000133886 ProtClustDB:CLSK828666
BioCyc:GSUL243231:GH27-2005-MONOMER Uniprot:Q74BQ4
Length = 896
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 39/157 (24%), Positives = 71/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++A+++L + V+ P E + G A K A + ++P+ K
Sbjct: 582 GNLDKALAVLDDAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALK- 640
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ F VQ ++A+A+ R+A+ +P LAS Y E GD +A + + + P
Sbjct: 641 VAAF-VQMKESAKAIEEARRAVTLKPGAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEP 699
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
N+ A + + G TA ++ E L+ +P+ A
Sbjct: 700 GNIGAAMQLGEYLGRSGNTAAAMAQYEAVLRNNPNHA 736
Score = 122 (48.0 bits), Expect = 0.00086, P = 0.00086
Identities = 56/251 (22%), Positives = 113/251 (45%)
Query: 32 PGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
P T ++ E A L + +QA+ + ++ +P E LGL ++ G A
Sbjct: 90 PSKTDIVLELAKLYNSQRKPDQAVEQAGKYLQSNPGSAEALEVLGLGYALKGMPAEAERN 149
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQ--AMYYIRQAIRAEPKDISLRIHLASFYVE 148
+++A P+ ++ QL +++ + + A I + + A+P ++ LAS+ +
Sbjct: 150 FLLALEKEPRRTSAKLQLAVLLMEQKSSREKEARALIDEILTADPGNVKAHNLLASYELS 209
Query: 149 IGDYEKAAESYEQIQKLFP-DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+G+ E+A E Y ++ L P D + G + L+ G+ ++ E ++ P ++ +
Sbjct: 210 LGNREQALEIYRKVAALTPGDPAPLYRQGV-ILLEKGEMDKAEKTAETLVQKFPQKSEGA 268
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
+ L+A +N A T ++ S K P L+ G+ YL L + E+
Sbjct: 269 RLKGLIAYQRKNYADAITA--------LQTSVKIAP-SLE---GLYYLGLSMYSRGELEN 316
Query: 268 ADLQWKNAIDH 278
A Q++ +DH
Sbjct: 317 ALSQFRRILDH 327
>TIGR_CMR|GSU_1987 [details] [associations]
symbol:GSU_1987 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR014266 TIGRFAMs:TIGR02917
RefSeq:NP_953036.2 GeneID:2686148 KEGG:gsu:GSU1987 PATRIC:22026837
HOGENOM:HOG000133886 ProtClustDB:CLSK828666
BioCyc:GSUL243231:GH27-2005-MONOMER Uniprot:Q74BQ4
Length = 896
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 39/157 (24%), Positives = 71/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++A+++L + V+ P E + G A K A + ++P+ K
Sbjct: 582 GNLDKALAVLDDAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALK- 640
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ F VQ ++A+A+ R+A+ +P LAS Y E GD +A + + + P
Sbjct: 641 VAAF-VQMKESAKAIEEARRAVTLKPGAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEP 699
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
N+ A + + G TA ++ E L+ +P+ A
Sbjct: 700 GNIGAAMQLGEYLGRSGNTAAAMAQYEAVLRNNPNHA 736
Score = 122 (48.0 bits), Expect = 0.00086, P = 0.00086
Identities = 56/251 (22%), Positives = 113/251 (45%)
Query: 32 PGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
P T ++ E A L + +QA+ + ++ +P E LGL ++ G A
Sbjct: 90 PSKTDIVLELAKLYNSQRKPDQAVEQAGKYLQSNPGSAEALEVLGLGYALKGMPAEAERN 149
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQ--AMYYIRQAIRAEPKDISLRIHLASFYVE 148
+++A P+ ++ QL +++ + + A I + + A+P ++ LAS+ +
Sbjct: 150 FLLALEKEPRRTSAKLQLAVLLMEQKSSREKEARALIDEILTADPGNVKAHNLLASYELS 209
Query: 149 IGDYEKAAESYEQIQKLFP-DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+G+ E+A E Y ++ L P D + G + L+ G+ ++ E ++ P ++ +
Sbjct: 210 LGNREQALEIYRKVAALTPGDPAPLYRQGV-ILLEKGEMDKAEKTAETLVQKFPQKSEGA 268
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
+ L+A +N A T ++ S K P L+ G+ YL L + E+
Sbjct: 269 RLKGLIAYQRKNYADAITA--------LQTSVKIAP-SLE---GLYYLGLSMYSRGELEN 316
Query: 268 ADLQWKNAIDH 278
A Q++ +DH
Sbjct: 317 ALSQFRRILDH 327
>UNIPROTKB|Q4QR29 [details] [associations]
symbol:ctr9 "RNA polymerase-associated protein CTR9
homolog" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0051571 "positive regulation of histone
H3-K4 methylation" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 GO:GO:0045944 GO:GO:0006351
GO:GO:0000122 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 CTD:9646 HOVERGEN:HBG081372 KO:K15176 EMBL:BC077978
EMBL:BC097638 RefSeq:NP_001086446.1 UniGene:Xl.16889
ProteinModelPortal:Q4QR29 GeneID:446236 KEGG:xla:446236
Xenbase:XB-GENE-5946199 Uniprot:Q4QR29
Length = 1157
Score = 125 (49.1 bits), Expect = 0.00055, P = 0.00055
Identities = 75/314 (23%), Positives = 132/314 (42%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK-- 106
+ + + LL + + P+ P N L H S + A + + A+
Sbjct: 250 SIKNGVQLLSKAYTIDPSNPMVLNHLA-NHFFFKKDYSKVQHLALHAFHNTEVEAMQAES 308
Query: 107 --QLL-TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH-LASFYVEIGDYEKAAESYEQI 162
QL +F VQ+ D QA Y QA + L L Y+ GD E A++ +E++
Sbjct: 309 CYQLARSFHVQE-DYDQAFQYYYQATQFAAASFVLPFFGLGQMYIYRGDKENASQCFEKV 367
Query: 163 QKLFPDNVDATKTGAQLFLKCG-QTARSIGI--LEEYLKVHPSDADLSVIDLLVAILMEN 219
K +P+N + K L+ Q R I L++ + +P D + + I+L A ++E
Sbjct: 368 LKAYPNNYETMKILGSLYAASDDQEKRDIAKSHLKKVTEQYPDDVE-AWIEL--AQILEQ 424
Query: 220 NAYEKTLQHIEHA-QIVRFSGK-ELPLKLKVKAGICYLRLGNMEKAEILF-ADLQWKNA- 275
+ L A +I++ + ++P ++ G + RLGN+ +A+ F A L A
Sbjct: 425 TDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAE 484
Query: 276 IDHAD-LITEVA-DTLMSLGHSNSALKYYHFLETNAGTDNGYL-YLKLAECYLSLKERAH 332
+H + ++ T +L L +H E+ N + +CYL L A
Sbjct: 485 AEHDEHYYNSISVTTSYNLARLYEGLCEFH--ESEKLYKNILREHPNYVDCYLRLGAMAR 542
Query: 333 AIMFFYKALDRFED 346
FY+A D F++
Sbjct: 543 DKGNFYEASDWFKE 556
>UNIPROTKB|Q74D87 [details] [associations]
symbol:GSU1432 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.25.40.10 RefSeq:NP_952483.1 ProteinModelPortal:Q74D87
GeneID:2687801 KEGG:gsu:GSU1432 PATRIC:22025707
HOGENOM:HOG000134346 OMA:NGAIEAD ProtClustDB:CLSK924505
BioCyc:GSUL243231:GH27-1411-MONOMER Uniprot:Q74D87
Length = 573
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 61/296 (20%), Positives = 120/296 (40%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A++ LK +V++ P Y LG A+ + K A ++Y A L P +L
Sbjct: 164 YEKAVNTLKSLVKVKPESSLGYYYLGKAYDQMKLQKEAANYYKKAIELKPDFEQAIIEL- 222
Query: 110 TFAVQKG----DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
VQ+G D A A Y + + P ++++ HL Y++ +Y++A + +++
Sbjct: 223 -GIVQEGMGLHDEAVATY--KSLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEK 279
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
++ ++ ++++ + +I + L+ P+ L V L E Y++
Sbjct: 280 GIGGLETSRKIGLIYMESERYDEAIAEFRDILEREPNA--LQVRFYLATAFEEKEEYDRA 337
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEV 285
L+ F+ E + + +GN EK + D H +L +
Sbjct: 338 LEEFGRIPPGSFNYFEAVGHM----AFIHKDMGNPEKGIAVLKDAIAAYP-SHLELHLYL 392
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
A SL H L +E + G D L+ ++ Y + + +I K L
Sbjct: 393 AGLYESLDHYTEGLAVLKAVEGDFGGDPR-LHFRMGTLYDKMGNKDESIARMKKVL 447
>TIGR_CMR|GSU_1432 [details] [associations]
symbol:GSU_1432 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.25.40.10 RefSeq:NP_952483.1 ProteinModelPortal:Q74D87
GeneID:2687801 KEGG:gsu:GSU1432 PATRIC:22025707
HOGENOM:HOG000134346 OMA:NGAIEAD ProtClustDB:CLSK924505
BioCyc:GSUL243231:GH27-1411-MONOMER Uniprot:Q74D87
Length = 573
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 61/296 (20%), Positives = 120/296 (40%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A++ LK +V++ P Y LG A+ + K A ++Y A L P +L
Sbjct: 164 YEKAVNTLKSLVKVKPESSLGYYYLGKAYDQMKLQKEAANYYKKAIELKPDFEQAIIEL- 222
Query: 110 TFAVQKG----DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
VQ+G D A A Y + + P ++++ HL Y++ +Y++A + +++
Sbjct: 223 -GIVQEGMGLHDEAVATY--KSLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEK 279
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
++ ++ ++++ + +I + L+ P+ L V L E Y++
Sbjct: 280 GIGGLETSRKIGLIYMESERYDEAIAEFRDILEREPNA--LQVRFYLATAFEEKEEYDRA 337
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEV 285
L+ F+ E + + +GN EK + D H +L +
Sbjct: 338 LEEFGRIPPGSFNYFEAVGHM----AFIHKDMGNPEKGIAVLKDAIAAYP-SHLELHLYL 392
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
A SL H L +E + G D L+ ++ Y + + +I K L
Sbjct: 393 AGLYESLDHYTEGLAVLKAVEGDFGGDPR-LHFRMGTLYDKMGNKDESIARMKKVL 447
>UNIPROTKB|G4N4R1 [details] [associations]
symbol:MGG_05151 "NMDA receptor-regulated protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:CM001233 Gene3D:1.25.40.10 KO:K00670 InterPro:IPR021183
PANTHER:PTHR22767:SF2 Pfam:PF12569 PIRSF:PIRSF000422
RefSeq:XP_003712683.1 ProteinModelPortal:G4N4R1
EnsemblFungi:MGG_05151T0 GeneID:2675366 KEGG:mgr:MGG_05151
Uniprot:G4N4R1
Length = 837
Score = 133 (51.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 59/249 (23%), Positives = 108/249 (43%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL- 108
+ + + +++++ +P ET L +A G + AF A + K +W
Sbjct: 27 YRRGLKAAEQILKKNPKHGETMAMKALIMNAQGKTEEAFALGKEAVSVDMKSHVVWHVYG 86
Query: 109 LTFAVQKG-DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + QK D A Y + A+R EPK ++ LA +++ DY+ ++ Q+ P
Sbjct: 87 MLYKTQKNFDEAIKAY--KFALRLEPKSAQIQRDLAILQIQMRDYQGYVQTRMQMLTARP 144
Query: 168 D---NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV---AILMENNA 221
N A L + + E+ LKV PS AD + ++ I+ E+
Sbjct: 145 QLRQNWTAVAIAHHLAGNLAEAENILTTYEQSLKVPPSRADFEHSEAIMYKNTIIAESGD 204
Query: 222 YEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYL-RLGNMEKAEILFADLQWKNAIDHAD 280
++ L H+E +I + L + ++ +A YL LG E+A + L +N DHAD
Sbjct: 205 TQRALDHLE--EISKSVLDRLAV-METRAK--YLSELGKKEEATKAWRALLDRNP-DHAD 258
Query: 281 LITEVADTL 289
+A+ +
Sbjct: 259 YYYGLAEAM 267
Score = 37 (18.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 569 LEKKEELRSLGAKMAYDSTDPNH 591
+ + + + +LG A + DPNH
Sbjct: 687 IRRNKYILALGCLNAARAIDPNH 709
>UNIPROTKB|F1NNA8 [details] [associations]
symbol:Gga.1615 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005739 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 OMA:RLYPRHA EMBL:AADN02006469 EMBL:AADN02006470
IPI:IPI00593086 Ensembl:ENSGALT00000021134 Uniprot:F1NNA8
Length = 945
Score = 134 (52.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 60/256 (23%), Positives = 107/256 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
ASL ++A + K + P + +N G+ G + A Y A HLSP
Sbjct: 652 ASLLAEQERLKEAEEVYKAGIENCPESSDLHNNYGVFLVDTGAPERAVSHYRQAIHLSPT 711
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
L G +A + ++A++ K + L + Y G YE+A + Y
Sbjct: 712 HHVAMVNLGRLHRSLGQNKEAEAWYKRALKVSRK-AEILSPLGALYYNTGRYEEALQVYR 770
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID---LLVAILM 217
+ L P N + AQ+ G+T + E + H D D+ ++ LL AI
Sbjct: 771 EAASLQPSNKETRLALAQVLAMMGRTKEA-----EKMTNHVLDEDVECLECYRLLSAIYS 825
Query: 218 ENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID 277
+ Y K L+ I+ A ++ K+ P K+ + + + + GN + + L D ++N
Sbjct: 826 KQEHYAKALEAIDKA--LQLKPKD-P---KIISELFFTK-GNQLREQNLL-DEAFENYKR 877
Query: 278 HADLITEVADTLMSLG 293
+L ++ A M++G
Sbjct: 878 AVELNSDQAQAWMNMG 893
Score = 37 (18.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 549 YEEASEIINLSMRLAYNILPLEKKEE 574
YE+A +++ S L N+ L++ E+
Sbjct: 909 YEKALQLVPNSKLLKENLAKLDRLEK 934
>WB|WBGene00003858 [details] [associations]
symbol:ogt-1 species:6239 "Caenorhabditis elegans"
[GO:0006493 "protein O-linked glycosylation" evidence=IMP]
[GO:0006112 "energy reserve metabolic process" evidence=IMP]
[GO:0040024 "dauer larval development" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0016262 "protein
N-acetylglucosaminyltransferase activity" evidence=ISS;IMP]
[GO:0006470 "protein dephosphorylation" evidence=IMP] [GO:0004722
"protein serine/threonine phosphatase activity" evidence=IMP]
[GO:0005977 "glycogen metabolic process" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0006048 "UDP-N-acetylglucosamine
biosynthetic process" evidence=ISS] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 UniPathway:UPA00378 GO:GO:0005634
GO:GO:0048471 GO:GO:0006470 GO:GO:0004722 GO:GO:0006493
GO:GO:0000003 GO:GO:0005977 GO:GO:0019915 Gene3D:1.25.40.10
GO:GO:0040024 GO:GO:0006048 GO:GO:0016262 EMBL:U77412 EMBL:FO080149
PIR:E88499 RefSeq:NP_001040860.1 UniGene:Cel.16882
ProteinModelPortal:O18158 SMR:O18158 DIP:DIP-26521N
MINT:MINT-1051575 STRING:O18158 CAZy:GT41 PaxDb:O18158
EnsemblMetazoa:K04G7.3a GeneID:176000 KEGG:cel:CELE_K04G7.3
UCSC:K04G7.3a CTD:176000 WormBase:K04G7.3a eggNOG:COG3914
GeneTree:ENSGT00550000074327 HOGENOM:HOG000003765 InParanoid:O18158
KO:K09667 OMA:LAYMPNT NextBio:890678 ArrayExpress:O18158
Uniprot:O18158
Length = 1151
Score = 124 (48.7 bits), Expect = 0.00071, P = 0.00070
Identities = 37/165 (22%), Positives = 67/165 (40%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI K+ + L P+ P+ Y L A G+ A Y+ A L P
Sbjct: 370 ACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANALKEKGSVVEAEQMYMKALELCPT 429
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G A +A+ P+ + +LAS + G A Y+
Sbjct: 430 HADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLNDAILHYK 489
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + G ++ +I ++++P+ AD
Sbjct: 490 EAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFAD 534
>UNIPROTKB|O18158 [details] [associations]
symbol:ogt-1 "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase" species:6239 "Caenorhabditis
elegans" [GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
UniPathway:UPA00378 GO:GO:0005634 GO:GO:0048471 GO:GO:0006470
GO:GO:0004722 GO:GO:0006493 GO:GO:0000003 GO:GO:0005977
GO:GO:0019915 Gene3D:1.25.40.10 GO:GO:0040024 GO:GO:0006048
GO:GO:0016262 EMBL:U77412 EMBL:FO080149 PIR:E88499
RefSeq:NP_001040860.1 UniGene:Cel.16882 ProteinModelPortal:O18158
SMR:O18158 DIP:DIP-26521N MINT:MINT-1051575 STRING:O18158 CAZy:GT41
PaxDb:O18158 EnsemblMetazoa:K04G7.3a GeneID:176000
KEGG:cel:CELE_K04G7.3 UCSC:K04G7.3a CTD:176000 WormBase:K04G7.3a
eggNOG:COG3914 GeneTree:ENSGT00550000074327 HOGENOM:HOG000003765
InParanoid:O18158 KO:K09667 OMA:LAYMPNT NextBio:890678
ArrayExpress:O18158 Uniprot:O18158
Length = 1151
Score = 124 (48.7 bits), Expect = 0.00071, P = 0.00070
Identities = 37/165 (22%), Positives = 67/165 (40%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G + AI K+ + L P+ P+ Y L A G+ A Y+ A L P
Sbjct: 370 ACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANALKEKGSVVEAEQMYMKALELCPT 429
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++G A +A+ P+ + +LAS + G A Y+
Sbjct: 430 HADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLNDAILHYK 489
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P DA + G ++ +I ++++P+ AD
Sbjct: 490 EAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFAD 534
>UNIPROTKB|O14879 [details] [associations]
symbol:IFIT3 "Interferon-induced protein with
tetratricopeptide repeats 3" species:9606 "Homo sapiens"
[GO:0035457 "cellular response to interferon-alpha" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008285
"negative regulation of cell proliferation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IDA] [GO:0009615
"response to virus" evidence=IMP] [GO:0005829 "cytosol"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0060337 "type I interferon-mediated signaling
pathway" evidence=TAS] [GO:0042802 "identical protein binding"
evidence=IPI] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 InterPro:IPR024122
Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005829 GO:GO:0005739 Reactome:REACT_6900
GO:GO:0043066 GO:GO:0008285 GO:GO:0060337 GO:GO:0051607
GO:GO:0009615 Gene3D:1.25.40.10 GO:GO:0035457 HOGENOM:HOG000001558
HOVERGEN:HBG066330 OrthoDB:EOG4NVZK4 EMBL:AF026939 EMBL:AF083470
EMBL:U52513 EMBL:BT007284 EMBL:BC001383 EMBL:BC004977
IPI:IPI00024254 RefSeq:NP_001026853.1 RefSeq:NP_001540.2
UniGene:Hs.731813 ProteinModelPortal:O14879 SMR:O14879
IntAct:O14879 MINT:MINT-1448195 STRING:O14879 PhosphoSite:O14879
PaxDb:O14879 PeptideAtlas:O14879 PRIDE:O14879 DNASU:3437
Ensembl:ENST00000371811 Ensembl:ENST00000371818 GeneID:3437
KEGG:hsa:3437 UCSC:uc001kgf.3 CTD:3437 GeneCards:GC10P091077
HGNC:HGNC:5411 MIM:604650 neXtProt:NX_O14879 PharmGKB:PA29651
eggNOG:NOG284690 InParanoid:O14879 OMA:LESTPNN PhylomeDB:O14879
GenomeRNAi:3437 NextBio:13544 ArrayExpress:O14879 Bgee:O14879
CleanEx:HS_IFIT3 Genevestigator:O14879 GermOnline:ENSG00000119917
PANTHER:PTHR10271:SF3 Uniprot:O14879
Length = 490
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 39/134 (29%), Positives = 62/134 (46%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH-KSAFDFYVI--AAH 96
E Q G E+A ++ + PN PE + L +A L NH + F V+ A
Sbjct: 142 EGWTQLKCGRNERAKVCFEKALEEKPNNPEFSSGLAIAMYHLDNHPEKQFSTDVLKQAIE 201
Query: 97 LSPKDSALWKQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
LSP D+ K LL +QK A+ ++ +A+ P + A FY GD +KA
Sbjct: 202 LSP-DNQYVKVLLGLKLQKMNKEAEGEQFVEEALEKSPCQTDVLRSAAKFYRRKGDLDKA 260
Query: 156 AESYEQIQKLFPDN 169
E ++++ + P+N
Sbjct: 261 IELFQRVLESTPNN 274
>UNIPROTKB|Q5LX99 [details] [associations]
symbol:SPO0317 "TPR domain protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13174 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:1.25.40.10
HOGENOM:HOG000138933 RefSeq:YP_165580.1 ProteinModelPortal:Q5LX99
GeneID:3195165 KEGG:sil:SPO0317 PATRIC:23373889 OMA:KMKGPDW
ProtClustDB:CLSK713481 Uniprot:Q5LX99
Length = 611
Score = 124 (48.7 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 40/146 (27%), Positives = 61/146 (41%)
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
+ YIR A+ P I + A +G Y+ A +Y+QI PD A A+
Sbjct: 318 LVYIRSAVHLRPDHIDALLMTAGLLESLGQYDLAVATYKQIPNDSPDYHAAELGRAEALR 377
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
+ + +I +LE+ K +PS V L + + AY++ + A + G
Sbjct: 378 RSAKPDAAIEVLEKLAKDYPSQPQAFVA--LGDLQRQQEAYDRAATAYDKALQLTDPGAP 435
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILF 267
L GIC+ RLGN AE F
Sbjct: 436 NMWFLHYARGICHERLGNWPGAEADF 461
Score = 45 (20.9 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 41 ASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
A+ Q + N F A + + P P + L+ ALG + A Y +A +
Sbjct: 74 AARQAVFANDFSSAADYFARALAIDPQNPALMENMVLSQLALGRLEQA---YPVAQLM-- 128
Query: 100 KDSALWKQLLTFAV 113
+++ L Q+ A+
Sbjct: 129 QEAGLQSQVANIAI 142
Score = 37 (18.1 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 506 SDDTDDESQQEAFR 519
+DDTD E+ E R
Sbjct: 573 ADDTDGEADPERIR 586
>TIGR_CMR|SPO_0317 [details] [associations]
symbol:SPO_0317 "TPR domain protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13174 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:1.25.40.10
HOGENOM:HOG000138933 RefSeq:YP_165580.1 ProteinModelPortal:Q5LX99
GeneID:3195165 KEGG:sil:SPO0317 PATRIC:23373889 OMA:KMKGPDW
ProtClustDB:CLSK713481 Uniprot:Q5LX99
Length = 611
Score = 124 (48.7 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 40/146 (27%), Positives = 61/146 (41%)
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
+ YIR A+ P I + A +G Y+ A +Y+QI PD A A+
Sbjct: 318 LVYIRSAVHLRPDHIDALLMTAGLLESLGQYDLAVATYKQIPNDSPDYHAAELGRAEALR 377
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
+ + +I +LE+ K +PS V L + + AY++ + A + G
Sbjct: 378 RSAKPDAAIEVLEKLAKDYPSQPQAFVA--LGDLQRQQEAYDRAATAYDKALQLTDPGAP 435
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILF 267
L GIC+ RLGN AE F
Sbjct: 436 NMWFLHYARGICHERLGNWPGAEADF 461
Score = 45 (20.9 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 41 ASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
A+ Q + N F A + + P P + L+ ALG + A Y +A +
Sbjct: 74 AARQAVFANDFSSAADYFARALAIDPQNPALMENMVLSQLALGRLEQA---YPVAQLM-- 128
Query: 100 KDSALWKQLLTFAV 113
+++ L Q+ A+
Sbjct: 129 QEAGLQSQVANIAI 142
Score = 37 (18.1 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 506 SDDTDDESQQEAFR 519
+DDTD E+ E R
Sbjct: 573 ADDTDGEADPERIR 586
>WB|WBGene00014114 [details] [associations]
symbol:tftc-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 GO:GO:0006898 GO:GO:0040010
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0040027
EMBL:Z70783 eggNOG:NOG275814 KO:K15201 GeneTree:ENSGT00390000016929
RefSeq:NP_505626.1 ProteinModelPortal:Q95PV7 SMR:Q95PV7
STRING:Q95PV7 PaxDb:Q95PV7 EnsemblMetazoa:ZK856.13 GeneID:179419
KEGG:cel:CELE_ZK856.13 UCSC:ZK856.13 CTD:179419 WormBase:ZK856.13
HOGENOM:HOG000018900 InParanoid:Q95PV7 OMA:MRNEYDY NextBio:905306
Uniprot:Q95PV7
Length = 1037
Score = 116 (45.9 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 33/111 (29%), Positives = 51/111 (45%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
MLG+A++ A GN A+ +L+EV++ Y + + LG+H+ A F ++A+H
Sbjct: 255 MLGQANVLAARGNITDAMEILREVIKQDHKHAIAYQQIATVYEQLGDHQKALQFGLLASH 314
Query: 97 LSPKDSAL-WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
L PK W V GD A+ I +A + I L FY
Sbjct: 315 LDPKTPPDDW-------VHWGDEAEKFGMIEEAAVCYDRAIHLNNENWKFY 358
Score = 54 (24.1 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 623 INSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLI 681
+NS++ + +FI K KD ISG+ + ++ A YL + NPLI
Sbjct: 853 VNSQNVCYHRFIMRALVKAKDNHALQAISGNNSLITGTYRHAMGEYLRVWVANKRNPLI 911
Score = 45 (20.9 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 142 LASFYVEIGDYEKAAESYE 160
+A +Y+ + D EKA +S E
Sbjct: 404 VAQYYITMNDEEKAIQSLE 422
Score = 39 (18.8 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 304 FLETNAGTDNGYLYLKLAECYLSLKERAHAIM 335
F + +GTD LKL EC +++ A++
Sbjct: 746 FQTSLSGTDIHDYCLKLIECLNKMEKHQDALI 777
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 687 617 0.00089 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 73
No. of states in DFA: 627 (67 KB)
Total size of DFA: 349 KB (2175 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.59u 0.07s 49.66t Elapsed: 00:00:03
Total cpu time: 49.60u 0.07s 49.67t Elapsed: 00:00:03
Start: Thu May 9 15:22:45 2013 End: Thu May 9 15:22:48 2013