BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005632
(687 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297736093|emb|CBI24131.3| unnamed protein product [Vitis vinifera]
Length = 915
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/706 (58%), Positives = 539/706 (76%), Gaps = 53/706 (7%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
KNKLSP VT+ LGEA+L YA+G +E+AI +LKEVVRL+PNLP+ Y+T GL ++A G+ K
Sbjct: 86 KNKLSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKR 145
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A +FY++AAHL+PKDS+LWK L+T+++++G+T QA Y + +AI A+P+DISLR H AS Y
Sbjct: 146 ALNFYMLAAHLTPKDSSLWKLLVTWSIEQGNTGQARYCLSKAITADPEDISLRFHRASLY 205
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
VE+G+Y+KAAESYEQI +LFP+NV+A KTGA+L+ KCGQ RS+ ILE+Y+K HP+ ADL
Sbjct: 206 VELGEYQKAAESYEQISQLFPENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADL 265
Query: 207 SVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEIL 266
S++D+L A+ MENN +++ LQHIEHAQ++ SGK+LPL L +KAGIC++ LGN+EKAE L
Sbjct: 266 SIVDMLAAVCMENNVHDRALQHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKAEAL 325
Query: 267 FADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLS 326
F+ LQ + DHA LI+EVAD+ MSL + ALKYY LE N G DNG+L+LK+A+CYLS
Sbjct: 326 FSVLQ-RETCDHAGLISEVADSFMSLELYDFALKYYLMLEGNVGRDNGFLHLKIAQCYLS 384
Query: 327 LKERAHAIMFFYK----------------------------------------------A 340
LKER AI FFYK
Sbjct: 385 LKERVQAIPFFYKENQEADRLAKRGASIPIKCSEDFFFSLGSPCKLMIVILFLVSIFFYT 444
Query: 341 LDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDS-LDMNSDKSNPWWLNEKIIMK 399
LD +DNIDARLTLA+LLLE AKE+EAI LLSPPK+L+S +D NSD+ PWWLN K+ +K
Sbjct: 445 LDVLQDNIDARLTLATLLLEGAKEDEAILLLSPPKNLESTVDPNSDEFQPWWLNGKVKLK 504
Query: 400 LCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKV--KVKRRLTKGILQQRTKIYNNLPT 457
L HIYR+KGM ++FVDAIFPLV ESL VE L+QKV +VK+RL+K +L +R K+ ++ +
Sbjct: 505 LSHIYRSKGMSDEFVDAIFPLVRESLFVETLKQKVTVRVKKRLSKSVLFERVKVLDDHHS 564
Query: 458 DSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEA 517
D++ G RP A S+L A+RA+K +QKK KEE+KA A AAGV+W+SD++DDES ++
Sbjct: 565 DNVFHGFRPMASTSDLSKASRAKKLLQKKATRKEERKAAAMAAGVDWYSDESDDESPEQK 624
Query: 518 FREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRS 577
REPPLPNLLK+EE+ LI+DLCKALASL++Y EA +IINL++RLAYNI+P+EKKEELRS
Sbjct: 625 LREPPLPNLLKDEEHHHLILDLCKALASLRKYWEALDIINLTLRLAYNIMPIEKKEELRS 684
Query: 578 LGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYL 637
LGA++AY+ TDP HGFD KYI+Q HP+SL+AWNCYYKV+SR+ +++SKHSK + +
Sbjct: 685 LGAQIAYNITDPKHGFDYVKYIVQQHPHSLAAWNCYYKVISRL---ENRYSKHSKLLHSM 741
Query: 638 RAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
R ++KDCVPPI+I GHQFTM S HQ AA+ YLEAYKL+PENPLINL
Sbjct: 742 RVRHKDCVPPIVIFGHQFTMISQHQIAAKEYLEAYKLMPENPLINL 787
>gi|356544401|ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Glycine max]
Length = 919
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/665 (56%), Positives = 498/665 (74%), Gaps = 21/665 (3%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
GSKN++ P +T+M G+A+ YA G++++A ++L EV+RL+PNL E+Y+TLGL +++L ++
Sbjct: 137 GSKNRVDPKLTQMQGDATFHYACGDYDRAKAVLCEVIRLAPNLHESYHTLGLVYTSLQDY 196
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAV------QKGDTAQAMYYIRQAIRAEPKDISL 138
K A Y+IAAHL PK+S LWK + T+++ ++G QA Y + +AI+A+PKD++L
Sbjct: 197 KRAMALYLIAAHLDPKESPLWKTIFTWSITFFKCREQGYVDQAGYCLLKAIKADPKDVTL 256
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
R HLA Y E+G Y+KAA +YEQ+ KL +N+DA K A+ + KCGQ SI ILE+Y+K
Sbjct: 257 RFHLARLYAELGHYQKAAVTYEQVHKLCCENIDALKAAAKFYKKCGQVEYSIQILEDYIK 316
Query: 199 VHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLG 258
P A++SV+DLL +LME A+++ LQHIEHAQ V + KELPL LK+KAGIC+ LG
Sbjct: 317 SQPDGANVSVVDLLGTVLMETKAHDRALQHIEHAQTVN-ARKELPLNLKIKAGICHAHLG 375
Query: 259 NMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYL 318
NME+A+ LF DL+ +NA H DL+T+VAD+LM L H N AL YY LE N +NG LYL
Sbjct: 376 NMERAQALFNDLKPENASKHIDLVTKVADSLMGLEHYNPALNYYLMLEGNIEKENGLLYL 435
Query: 319 KLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD 378
K+A CY+SLKER+ AI+F+ KAL+ +D++DAR+TLASLLLEEAKE+EAI+LLSPPKD D
Sbjct: 436 KIARCYMSLKERSQAILFYSKALETLQDDVDARITLASLLLEEAKEDEAISLLSPPKDSD 495
Query: 379 SLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKR 438
+ S+KSN WW + +I +KLC+IY +G +DFVD IFPLV ESL V LRQK K K+
Sbjct: 496 FGEAPSEKSNRWWADIRIKLKLCNIYWNRGTLDDFVDTIFPLVRESLYVATLRQKGKSKK 555
Query: 439 RLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAK 498
RL+K L +R ++ + D++ G RP A S+LL A+RA+K +QKK KE++KA A
Sbjct: 556 RLSKRDLVERVRVLDGPEKDNVFRGFRPVAAPSDLLKASRAKKLLQKKAMEKEKRKAEAL 615
Query: 499 AAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINL 558
A+G++W + REPPL NLLK+EE+ LIIDLCKALASLQRY EA EIINL
Sbjct: 616 ASGIDWLKN-----------REPPLCNLLKDEEHHQLIIDLCKALASLQRYWEALEIINL 664
Query: 559 SMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLS 618
S+RLA+ L EKKEELRSLGA+MAY++TDP HGFDC KYI+Q HP+ ++AWNCYYKV+S
Sbjct: 665 SLRLAHTSLSTEKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPHGVAAWNCYYKVIS 724
Query: 619 RMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPEN 678
R+ ++ ++H KF+R ++ K+ DCVPPI+ISGHQFT+ SHHQDAAR YLEAYKLLPEN
Sbjct: 725 RL---ENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTICSHHQDAARKYLEAYKLLPEN 781
Query: 679 PLINL 683
PL+NL
Sbjct: 782 PLVNL 786
>gi|449458227|ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis
sativus]
Length = 927
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/684 (55%), Positives = 506/684 (73%), Gaps = 10/684 (1%)
Query: 1 MELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEV 60
+E +NYG RK K KKRGRRKGSK KL+ VTK+LG+A+L YA G E+AISLL++V
Sbjct: 126 LEAMNYGSRRK--LKEPKKRGRRKGSKKKLNRDVTKLLGDATLCYAQGEHEKAISLLRQV 183
Query: 61 VRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQ 120
V +P+LP++Y+TLGL ++A+G+ A FY++AAHL PKDS+LWK L ++++ +GD Q
Sbjct: 184 VLRAPDLPDSYHTLGLVYNAIGDDVKAMGFYMLAAHLMPKDSSLWKLLFSWSIDRGDIDQ 243
Query: 121 AMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLF 180
A Y + +AI+AEP DI+L H AS Y+E GD EKAAE+Y+QI + NV+A TGA+L+
Sbjct: 244 ASYCLSKAIKAEPDDINLLFHRASLYLERGDCEKAAETYDQIHQQCLGNVEALMTGAKLY 303
Query: 181 LKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGK 240
KCG R+I ILE+Y+K HPS+ADL V+DLL ++ M + + K L+ IEHA V +G
Sbjct: 304 QKCGHLERAICILEDYIKGHPSEADLDVVDLLASLYMGSKEFSKALERIEHADRVYCAGN 363
Query: 241 ELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALK 300
ELPL L KAGIC+ LG++EKAE LFA+L+ + DH++L+ EVAD+LMSL H + ALK
Sbjct: 364 ELPLNLTTKAGICHAHLGDLEKAECLFANLRRETTYDHSNLMIEVADSLMSLKHYSWALK 423
Query: 301 YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
YY E NG LYLK+AECYLS ER AI+FFYK L EDNI+ARLTLASLLLE
Sbjct: 424 YYLMSEEV----NGILYLKIAECYLSTNEREQAIVFFYKVLQHVEDNINARLTLASLLLE 479
Query: 361 EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL 420
EA+++EAI+LLSPPKD + +S K PWWLNEK+ +KLCHIYR +G+ E+FV+ IFPL
Sbjct: 480 EARDKEAISLLSPPKDSNPTSSSSSKLKPWWLNEKVKLKLCHIYRTRGLLENFVEVIFPL 539
Query: 421 VCESLCVEALRQKVKV-KRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARA 479
V ESL +E L++K+KV K++L + +L +R K+ + T ++ G +P APKS+L A+RA
Sbjct: 540 VRESLYIETLQEKIKVNKKKLPRRVLLERVKVLDGRETGNLFRGFKPVAPKSDLTKASRA 599
Query: 480 RKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDL 539
++ +QK+E +KEEKKA A AAGV DD DDE RE PLPNLLK EE LI+DL
Sbjct: 600 KRLLQKRERIKEEKKAKALAAGVNLSYDDLDDEPALRMHRESPLPNLLKEEEYHILIVDL 659
Query: 540 CKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYI 599
CKALASL R EA EII+L+++LA+N L +E+KEEL+ LGA++A+ ST HGF+ AK++
Sbjct: 660 CKALASLGRCSEALEIISLTLKLAFNSLSMERKEELQLLGAQLAFSSTGTMHGFNFAKHV 719
Query: 600 LQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMAS 659
++ +PYS+SAWNCYYKV S + ++ S+H K + +++KYKDC PP II+GHQFT S
Sbjct: 720 VKQYPYSISAWNCYYKVASCL---TNRDSRHCKLLNSMQSKYKDCAPPYIIAGHQFTTIS 776
Query: 660 HHQDAARCYLEAYKLLPENPLINL 683
HHQDAAR YLEAYK++P++PLINL
Sbjct: 777 HHQDAARKYLEAYKIMPDSPLINL 800
>gi|357474517|ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
gi|355508598|gb|AES89740.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
Length = 937
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/682 (54%), Positives = 500/682 (73%), Gaps = 8/682 (1%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
EL+N G ++ +K +KKRGR+KGSK KL +++M G+A + Y ++ AI +L EVV
Sbjct: 136 ELMNLGHGKRSKKKRSKKRGRQKGSKKKLDEKISQMFGDALMHYTSRRYDMAIDVLHEVV 195
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
RL PNLP+ Y+ LG H A+G+H++ FY+I AHL+PKDS+LW++L +++++GD QA
Sbjct: 196 RLEPNLPDPYHILGAVHGAIGDHENEMGFYMIYAHLTPKDSSLWERLFVWSIKQGDAGQA 255
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
Y I +AI+A+P+DISLR H A Y E +Y+KAAE+YEQI +L ++ DA K A+ +
Sbjct: 256 SYCISKAIKADPQDISLRRHQALLYAESQNYQKAAEAYEQIHQLCRED-DALKEAAKFYR 314
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
KCGQ RSI ILE+YLK P + SV+DLL AILME A+++ LQ IE +Q+V GKE
Sbjct: 315 KCGQVERSICILEDYLKSKPDGVNASVVDLLGAILMEIKAHDRALQFIEQSQVV---GKE 371
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
LPL LKVKAGIC++ LGNME A++ F DL+ +NA H +LITEVAD+LM LGH NSAL Y
Sbjct: 372 LPLNLKVKAGICHVHLGNMEIAQVFFNDLKPENASKHVELITEVADSLMGLGHYNSALNY 431
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
+ LE N+ +NG+LYLK+A CY SL+ER AI+ FYKAL+ +D+++AR+ LASLL+EE
Sbjct: 432 FKMLEGNSKNENGFLYLKIARCYRSLEERKQAIISFYKALETLQDDVEARVALASLLVEE 491
Query: 362 AKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLV 421
KE EAI+LLSPPKD DS + +S+KSN WW++ +I +KLC+I++ +GM DFV+ PLV
Sbjct: 492 GKENEAISLLSPPKDSDSGEAHSEKSNRWWVDVRIKLKLCNIFQIRGMLNDFVNVSLPLV 551
Query: 422 CESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARK 481
ESL V A R+K + KRRL+ L++R ++ N T+S+ G RP S+L A+RA+K
Sbjct: 552 HESLHVPAPRRKGQSKRRLSIRDLEKRVRVLNVPETNSVFRGFRPITSSSDLSKASRAKK 611
Query: 482 KIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCK 541
+ KK KE KKA A A+G++W SDD+DDE QE + PL NL K+E LIIDLC
Sbjct: 612 LLLKKAIEKERKKAEAVASGIDWLSDDSDDEP-QEPNTDSPLCNLHKDEGYHQLIIDLCN 670
Query: 542 ALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQ 601
ALASLQRY EA EIINL++RLA+ L EK E+LRSL +MAY++TDP GFDC K ++Q
Sbjct: 671 ALASLQRYSEALEIINLTLRLAHTSLSTEKNEKLRSLEVQMAYNTTDPKQGFDCVKDMVQ 730
Query: 602 LHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHH 661
H +S++AWNCYYKV+SR+ ++ ++H KF+R ++ K+ DCVPPI+IS HQFT+ SHH
Sbjct: 731 QHAHSVAAWNCYYKVVSRL---ENRDTRHDKFLRSMQGKFVDCVPPILISAHQFTLCSHH 787
Query: 662 QDAARCYLEAYKLLPENPLINL 683
QDAAR YLEAYKLLPENPL+NL
Sbjct: 788 QDAARKYLEAYKLLPENPLVNL 809
>gi|356540992|ref|XP_003538968.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Glycine max]
Length = 929
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/668 (54%), Positives = 477/668 (71%), Gaps = 46/668 (6%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
KKRGRRKGSKNK P +T+MLG+A+ YA G+++QA ++L+EV+RL+PNL E+Y+TLGL
Sbjct: 172 KKRGRRKGSKNKDDPKLTQMLGDATFHYARGDYDQAKAVLREVIRLAPNLHESYHTLGLF 231
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF--AVQKGDTAQAMYYIRQAIRAEPKD 135
+L TF ++G QA Y + +AI+A+PKD
Sbjct: 232 -----------------------------ELRTFFKCREQGYVDQAGYCLLKAIKADPKD 262
Query: 136 ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
++LR HLA Y E+G Y+KAA +YEQ+ KL +N+DA K A+ + KCGQ S+ ILE+
Sbjct: 263 VTLRCHLARLYAELGHYQKAAVTYEQVHKLCCENIDALKAAAKFYKKCGQVEYSVRILED 322
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYL 255
Y+K P A+ SV+DLL ILME A+++ LQHIEHAQ V + KELPL LK+KAGIC+
Sbjct: 323 YIKSQPDVANASVVDLLGTILMETKAHDRALQHIEHAQAVN-ARKELPLNLKIKAGICHA 381
Query: 256 RLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY 315
LGN+E A++LF DL+ +NA H DL+T VAD+LM L H N AL YY LE N +NG
Sbjct: 382 HLGNLEMAQVLFNDLKPENASKHIDLVTGVADSLMGLEHYNPALNYYLMLEGNVEKENGL 441
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPK 375
LYLK+A CY+SLKER+ AI+F+ KAL+ +D++DAR+TLASLLLEE KE+EAI LLSPPK
Sbjct: 442 LYLKIARCYMSLKERSQAILFYSKALETLQDDVDARITLASLLLEEGKEDEAIFLLSPPK 501
Query: 376 DLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVK 435
D D + S KSN WW + +I +KLC+IY +G +DFVD IFPL+ ESL V RQK K
Sbjct: 502 DSDFGEAPSGKSNRWWFDIRIKLKLCNIYWNRGTLDDFVDTIFPLIRESLYVATCRQKGK 561
Query: 436 VKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKA 495
K+RL+K L +R ++ + D++ G RP A S+LL A+RA+K +QKK KE++KA
Sbjct: 562 SKKRLSKRDLVERVRVLDGPEKDNVFRGFRPVAAPSDLLKASRAKKLLQKKAIEKEKRKA 621
Query: 496 LAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEI 555
A A+G++W + REPPL NLLK+EE+ LIIDLCKALASLQRY EA EI
Sbjct: 622 EALASGIDWLKN-----------REPPLCNLLKDEEHHQLIIDLCKALASLQRYWEALEI 670
Query: 556 INLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYK 615
INL +RLA+ L EKKEELRSLGA+MAY++TDP HGFDC KYI+Q HP+S++AWNCYYK
Sbjct: 671 INLFLRLAHTSLSTEKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPHSVAAWNCYYK 730
Query: 616 VLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLL 675
V+SR+ ++ ++H KF+R ++ K+ DCVPPI+ISGHQFT+ SHHQDAAR YLEAYKLL
Sbjct: 731 VISRL---ENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTICSHHQDAARKYLEAYKLL 787
Query: 676 PENPLINL 683
PENPL+NL
Sbjct: 788 PENPLVNL 795
>gi|357473897|ref|XP_003607233.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
gi|355508288|gb|AES89430.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
Length = 958
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/691 (52%), Positives = 492/691 (71%), Gaps = 16/691 (2%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
E IN+G ++ +K +KKRGR+KGSK KL +++MLG+A + YA G + AIS+L EVV
Sbjct: 135 EFINFGEGKRPRKKRSKKRGRQKGSKKKLDEKISQMLGDAHVHYANGRHKMAISVLHEVV 194
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
RL PNLP++Y+TLGL H A+G+H++ FY+I AHL+PKD LWK L +++ + D QA
Sbjct: 195 RLEPNLPDSYHTLGLVHGAIGDHENEMGFYMITAHLTPKDPTLWKTLYVWSIGQDDIGQA 254
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
Y I +AI+A+P+D SLR H A Y E +Y+KAAE+YEQ+ +L +NVDA K A+ +
Sbjct: 255 SYCISKAIKADPQDSSLRSHQAMLYAESQNYQKAAEAYEQVYQLCRENVDALKAAAKYYQ 314
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
KCGQ RSI ILE+YLK P + SV+DLL AILME A+++ LQ+IE +Q+V GKE
Sbjct: 315 KCGQVERSICILEDYLKNKPDGVNASVVDLLGAILMEIKAHDRALQYIEQSQVV---GKE 371
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
LPL LKVKAGIC++ LGN+E A++ F DL+ +NA H + ITEVAD+ M LGH NSAL Y
Sbjct: 372 LPLNLKVKAGICHVHLGNLEMAQVFFNDLKPENASKHVESITEVADSFMGLGHYNSALNY 431
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
+ LE N+ ++G LYLK+A CY +L ER AI+ FY L+ +D+++AR+TLASLL+EE
Sbjct: 432 FKMLEGNSKNEDGLLYLKIARCYQALGERKQAIISFYIVLETLQDDVEARITLASLLVEE 491
Query: 362 AKEEEAITLLSPPKD--LDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFP 419
KE EAI+LLSPPKD DS + +S+K N WW++ +I +KLC+I++ +GM DFVD FP
Sbjct: 492 GKENEAISLLSPPKDSGTDSGEAHSEKPNRWWIDVRIKLKLCNIFQIRGMLTDFVDVCFP 551
Query: 420 LVCESLCVEALRQKVKV-------KRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSE 472
LV ESL V ++K K+ K+RL+ L +R + TDS+ G + A S+
Sbjct: 552 LVRESLNVATPKRKGKLLLPGKSKKKRLSTSDLLKRVEKLAAPETDSVFRGFKAVATSSD 611
Query: 473 LLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEEN 532
L A+RA+K +++K KE++KA A A+G++W SDD+DDE Q+ E PL NL K+E
Sbjct: 612 RLKASRAKKALEEKAIEKEKRKAEAAASGIDWRSDDSDDELQKPN-TESPLCNLHKDEGY 670
Query: 533 QCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHG 592
L+IDLC ALASLQ Y EA EIINLS++LA+ L EK E+LRSLG +MAY + DP G
Sbjct: 671 HQLLIDLCNALASLQMYREALEIINLSLKLAHISLSAEKNEKLRSLGVQMAYSTPDPKQG 730
Query: 593 FDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISG 652
FDC K I++ H S++AWNCYYKV+SR+ ++ ++H KF+R ++ KY D VPPI+IS
Sbjct: 731 FDCVKGIVKQHAQSVAAWNCYYKVISRL---ENRDTRHDKFLRDMQEKYVDSVPPILISA 787
Query: 653 HQFTMASHHQDAARCYLEAYKLLPENPLINL 683
HQFT+ SHHQDAAR YLEAYKLLP+NPL+NL
Sbjct: 788 HQFTLCSHHQDAARKYLEAYKLLPKNPLVNL 818
>gi|255556705|ref|XP_002519386.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223541453|gb|EEF43003.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 684
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/570 (57%), Positives = 440/570 (77%), Gaps = 22/570 (3%)
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
++GD A+A Y+ +AIRA+P DISLR A YV++G+++KAAESY+QI ++ ++++
Sbjct: 5 ERGDVARASMYLAKAIRADPNDISLRKRQALLYVKLGNFQKAAESYDQISQICSEDIEVL 64
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQ 233
K A+L+ +CGQ+ RS+ ILE+Y HPS AD SVIDLL A+LM+ NAY K LQHIEHA
Sbjct: 65 KIAAELYSECGQSERSVSILEKYFDGHPSGADFSVIDLLAAVLMDTNAYNKALQHIEHAH 124
Query: 234 IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLG 293
+V +SGKE+PL+LK+KAGIC++ L N+EKAE+LF++L+ + ++ HA+LI +VA+ M+L
Sbjct: 125 LVYYSGKEMPLQLKIKAGICHIHLKNVEKAEMLFSNLELE-SVSHAELIMDVANAYMNLE 183
Query: 294 HSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLT 353
H ALKYY LE+NAG +NGY++LK+A+CYLSLK+R A MFFYKAL ED++D RL
Sbjct: 184 HLQLALKYYLILESNAGGENGYIHLKIAQCYLSLKDREKATMFFYKALHALEDSVDCRLA 243
Query: 354 LASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDF 413
LASL+LE+ KE+EAI+LL+PP+ LDS++++SDK PWWL+ KI ++LCHIYR++GM EDF
Sbjct: 244 LASLILEDGKEDEAISLLAPPEGLDSINLSSDKHKPWWLDGKIKLRLCHIYRSRGMLEDF 303
Query: 414 VDAIFPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSEL 473
++ I PLV ESL V++LRQ KVKRRLT +L++RTKI + + + G+RP A +S+L
Sbjct: 304 INTILPLVRESLYVKSLRQ--KVKRRLTTSVLRKRTKILDVGEINDVFGGVRPLASRSDL 361
Query: 474 LVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQ 533
L A RARK +QK KEE+K A+AAG++ H R PPLP+ LK+EE+
Sbjct: 362 LKATRARKMLQK----KEEEKVEARAAGIDCH------------IRIPPLPDFLKDEEHH 405
Query: 534 CLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGF 593
LIIDLCKAL SLQRY EA EIINL+ RLAY LP EKKEEL+SL A+++Y +TDP HGF
Sbjct: 406 NLIIDLCKALQSLQRYWEALEIINLTRRLAYKNLPNEKKEELQSLAAQISYKTTDPKHGF 465
Query: 594 DCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGH 653
DC + I+ HPYSL+AWNCYYK+ R+GK +S+H+KF+RY+R+K+ DCVPPIII GH
Sbjct: 466 DCVRSIVVQHPYSLAAWNCYYKITLRLGK---NYSRHAKFLRYMRSKHNDCVPPIIIYGH 522
Query: 654 QFTMASHHQDAARCYLEAYKLLPENPLINL 683
QFT+ASHHQDAAR YL AYKLLPE+PLINL
Sbjct: 523 QFTVASHHQDAAREYLAAYKLLPESPLINL 552
>gi|115485047|ref|NP_001067667.1| Os11g0266800 [Oryza sativa Japonica Group]
gi|108864222|gb|ABA92586.2| TPR Domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113644889|dbj|BAF28030.1| Os11g0266800 [Oryza sativa Japonica Group]
Length = 900
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 295/678 (43%), Positives = 435/678 (64%), Gaps = 20/678 (2%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSP 65
+G RK+ K +KRGR+KG++NK SP VTK LG+A+L + F++AI +L EVVR++P
Sbjct: 114 FGLRRKRRSKDARKRGRKKGTRNKYSPEVTKKLGDATLLFTESRFKEAIPILHEVVRIAP 173
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
NL +Y+ LG + G A +F ++AA++SPKD LWK+L+ A++K D A A + +
Sbjct: 174 NLSNSYHLLGSIYKECGELDKAINFLMLAAYVSPKDVFLWKKLIDMALKKEDAALARHCV 233
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
+A+RA+P+D+ L+ A+ Y + DY+KA E YEQI +++P N+ A K AQ++ CGQ
Sbjct: 234 LKAMRADPEDVGLKFDCANIYRALHDYQKAGEIYEQIVRIYPSNIVARKAAAQMYRDCGQ 293
Query: 186 TARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLK 245
++I +LE+Y+ ++ D + +DLL+++ + NNAY + L+ IE A IV S LP++
Sbjct: 294 IDKAINLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIERAHIVFGSQHNLPVQ 353
Query: 246 LKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFL 305
L+ KA IC+ LG+M+ AE+ ++ + + D+ D+I EVA TL +LG A+K+Y +
Sbjct: 354 LQAKAVICHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMI 413
Query: 306 ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEE 365
E A ++G Y+K+ +CY+ + E+ AI +F KAL R EDNID R+TL+SL ++ K +
Sbjct: 414 EDVAVHNDGSSYVKVGQCYMVIGEKRKAIPYFQKALQRMEDNIDVRITLSSLFVDVDKSD 473
Query: 366 EAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESL 425
EAI LLSPP + S +D+ PWWL+ K+ M L +IY KGM EDFV I + E+L
Sbjct: 474 EAIVLLSPPNNSGSKSA-TDQPKPWWLDGKVKMHLANIYYNKGMFEDFVGTILIPILETL 532
Query: 426 CVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQK 485
+E +KV+ ++L +L +R K+ +S+ G+RP A +EL A+RA+K ++K
Sbjct: 533 NIEYANRKVRKAKKLPTNVLYERAKVLAEQRPESVFQGLRPIASPAELQKASRAKKLLEK 592
Query: 486 KEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALAS 545
+ A E DT + Q + + PP+ LL N EN L++ LC+ LA
Sbjct: 593 RAASNE----------------DTIKDDLQRSKQIPPISGLLTNAENHQLVLHLCQTLAL 636
Query: 546 LQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPY 605
L RY EA ++IN +++L + L E KEELRSLGA++AY + DP HGF+ +Y++Q HPY
Sbjct: 637 LHRYWEALQVINRTLKLGNDTLADENKEELRSLGAQIAYRAPDPRHGFNYVRYVVQQHPY 696
Query: 606 SLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAA 665
SL+AWN YYKV SR I + S+H KF+ R + DCVPPIIISGH+FT S HQ AA
Sbjct: 697 SLAAWNSYYKVTSR---IEDRFSRHHKFLLRTREEKTDCVPPIIISGHRFTAISQHQSAA 753
Query: 666 RCYLEAYKLLPENPLINL 683
R YLEAYKL PENP INL
Sbjct: 754 RDYLEAYKLNPENPFINL 771
>gi|449476653|ref|XP_004154797.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
polypeptide 3-like [Cucumis sativus]
Length = 627
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 282/511 (55%), Positives = 375/511 (73%), Gaps = 18/511 (3%)
Query: 175 TGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQI 234
TGA+L+ KCG R+I ILE+Y+K HPS+ADL V+DLL ++ M + + K L+ IEHA
Sbjct: 2 TGAKLYQKCGHLERAICILEDYIKGHPSEADLDVVDLLASLYMGSKEFSKALERIEHADR 61
Query: 235 VRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGH 294
V +G ELPL L KAGIC+ LG++EKAE LFA+L+ + DH++L+ EVAD+LMSL H
Sbjct: 62 VYCAGNELPLNLTTKAGICHAHLGDLEKAECLFANLRRETTYDHSNLMIEVADSLMSLKH 121
Query: 295 SNSALKYYHFLE-TNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLT 353
+ ALKYY E NAG + G LYLK+AECYLS ER A FFYK L EDNI+ARLT
Sbjct: 122 YSWALKYYLMSEEVNAGENMGILYLKIAECYLSTNEREQAXCFFYKVLQHVEDNINARLT 181
Query: 354 LASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDF 413
LASLLLEEA+++EAI+LLSPPKD + +S K PWWLNEK+ +KLCHIYR +G+ E+F
Sbjct: 182 LASLLLEEARDKEAISLLSPPKDSNPTSSSSSKLKPWWLNEKVKLKLCHIYRTRGLLENF 241
Query: 414 VDAIFPLVCESLCVEALRQKVKV-KRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSE 472
V+ IFPLV ESL +E L++K+KV K++L + +L +R K+ + T ++ G +P APKS+
Sbjct: 242 VEVIFPLVRESLYIETLQEKIKVNKKKLPRRVLLERVKVLDGRETGNLFRGFKPVAPKSD 301
Query: 473 LLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEEN 532
L A+RA++ +QK+E +KEEKKA A AAG+ H RE PLPNLLK EE
Sbjct: 302 LTKASRAKRLLQKRERIKEEKKAKALAAGLRMH-------------RESPLPNLLKEEEY 348
Query: 533 QCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHG 592
LI+DLCKALASL R EA EII+L+++LA+N L +E+KEEL+ LGA++A+ ST HG
Sbjct: 349 HILIVDLCKALASLGRCSEALEIISLTLKLAFNSLSMERKEELQLLGAQLAFSSTGTMHG 408
Query: 593 FDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISG 652
F+ AK++++ +PYS+SAWNCYYKV S + ++ S+H K + +++KYKDC PP II+G
Sbjct: 409 FNFAKHVVKQYPYSISAWNCYYKVASCL---TNRDSRHCKLLNSMQSKYKDCAPPYIIAG 465
Query: 653 HQFTMASHHQDAARCYLEAYKLLPENPLINL 683
HQFT SHHQDAAR YLEAYK++P++PLINL
Sbjct: 466 HQFTTISHHQDAARKYLEAYKIMPDSPLINL 496
>gi|357115318|ref|XP_003559437.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Brachypodium distachyon]
Length = 901
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 293/680 (43%), Positives = 428/680 (62%), Gaps = 17/680 (2%)
Query: 5 NYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS 64
+G RK+ K KKRGR KG +NK SP V K LG+A+L + F++AI +L E+VR++
Sbjct: 107 GFGLRRKRRSKNGKKRGRTKGRRNKCSPEVIKKLGDATLLFTENRFKEAIPILHEIVRIA 166
Query: 65 PNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYY 124
PN P +YN LG + G A +F ++AA++SPKD +LWK+L+ A++K D A A +
Sbjct: 167 PNFPNSYNLLGSIYKENGEIDKAINFVMLAAYVSPKDVSLWKKLIDLALKKEDAALARHC 226
Query: 125 IRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCG 184
+A+RA+P+D+ L+ A+ Y + DY+KAAE YEQI +++P N+ A K AQ++
Sbjct: 227 ALKAMRADPEDVGLKFDCANIYRALHDYQKAAEIYEQIVRIYPSNIVARKAAAQMYRDSS 286
Query: 185 QTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPL 244
Q ++I +LE+++ + D +++DLL+++ + NN++ + L+ IE A V S +LP+
Sbjct: 287 QIDKAISLLEDFVDARTTKIDWNLLDLLISLYLRNNSHGEALRQIEKAHQVLGSQHKLPV 346
Query: 245 KLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHF 304
L+ K IC LG+M+ AE+ ++ + + + DL+ EVA TL ++G A+K+Y
Sbjct: 347 NLQAKELICQAYLGDMKHAEMFLQEVCLERSKESTDLVKEVASTLENMGQYEYAIKFYLM 406
Query: 305 LETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKE 364
+E A ++G + LA CY+ + E+ AI +F KAL+R +DN+D R+TL SLL++E K
Sbjct: 407 IEDVAVQNDGSPDVDLARCYMVIGEKRKAIPYFEKALERMKDNVDVRITLCSLLVDEGKS 466
Query: 365 EEAITLLSPPKDLDSLDMN-SDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCE 423
EAI LL PPK+ +SL N DK PWWL+ K+ MKL +Y G EDFV+ IF V E
Sbjct: 467 TEAIDLLKPPKNSESLSANIPDKQKPWWLDGKVKMKLAKLYYNNGKLEDFVETIFLPVLE 526
Query: 424 SLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKI 483
+L +E +KVK ++L +L++R K+ DSI+ G RP A +E+L A RA+K +
Sbjct: 527 TLDIEYANRKVKPTKKLPDDVLRERAKVLGEERPDSIIQGCRPIASPAEVLKANRAKKTL 586
Query: 484 QKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKAL 543
+K+ A E DT + + A + PPLP LL + EN L++DLC+ L
Sbjct: 587 EKRAASNE----------------DTVKDDTRRAKQIPPLPGLLADVENHQLVLDLCRTL 630
Query: 544 ASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLH 603
SLQRY +A +IIN ++RL + L + KEELRSLGA++AY + DP GFD +Y++Q H
Sbjct: 631 TSLQRYWDALQIINRTLRLGNDALADDNKEELRSLGAEIAYRAPDPRPGFDYLRYVVQQH 690
Query: 604 PYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQD 663
P SLSAWN YYKV SR S+ S+H KF+ + CVPPIII GH+FT S HQ
Sbjct: 691 PDSLSAWNSYYKVTSRTEDKISRISRHLKFLLKTKKDNPKCVPPIIIHGHRFTANSQHQS 750
Query: 664 AARCYLEAYKLLPENPLINL 683
AA+ YLEAYKL PENPLINL
Sbjct: 751 AAQEYLEAYKLDPENPLINL 770
>gi|302794432|ref|XP_002978980.1| hypothetical protein SELMODRAFT_444100 [Selaginella moellendorffii]
gi|300153298|gb|EFJ19937.1| hypothetical protein SELMODRAFT_444100 [Selaginella moellendorffii]
Length = 1047
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 293/683 (42%), Positives = 445/683 (65%), Gaps = 13/683 (1%)
Query: 6 YGGYRKKTRKLNKKRGRRK----GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
+G R++ K++GR+K ++L P V++ LGEA+L YA ++AI+LLKEVV
Sbjct: 239 FGPKRRRRAGEAKRKGRKKVPGIPGASRLPPEVSRKLGEANLLYATRKNDEAIALLKEVV 298
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
RL+PN P+ Y+TLGL + A+G+ K A +FY+I AHL PKD+ALWK+L +++ + G+T Q
Sbjct: 299 RLAPNAPDAYHTLGLLYDAMGDRKKALNFYMICAHLKPKDAALWKRLASWSTELGNTGQV 358
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
++ + +AIRA+P DI + AS Y EI D++KAA+++EQ+ L +V+ K A++
Sbjct: 359 IHCLTKAIRADPDDIDAKWDRASLYAEILDFQKAADAFEQMLVLRSSDVEVCKMVAKMQH 418
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
K G R+ +LE+++ H ++AD + ++LL + M N Y L I+ A+ + G+
Sbjct: 419 KNGNIQRATEVLEKFIDEHSAEADFAAVNLLAELHMGNRNYAAALSQIDRARQMYCHGQA 478
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
LPL L +K+GIC++ LGN+ AE F DL+ + D ADL+ +V DT +S+G + AL Y
Sbjct: 479 LPLDLSIKSGICHVHLGNLLAAERDFEDLRKEGLDDLADLVLDVGDTYLSVGRHHDALGY 538
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
Y LE N DNG L LK+AECY+++ AI +Y+ +++ ++DARLTLASLLL
Sbjct: 539 YIILEGNDAYDNGTLSLKIAECYMAVDALEDAIRVYYRVMEKLPQHVDARLTLASLLLRC 598
Query: 362 AKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLV 421
++ ++AI LL PP+ D+ S WW N +I MKL IY +G F++ I P +
Sbjct: 599 SRLDDAINLLKPPQVTDT----SVSGLYWWQNGRIKMKLAEIYHGQGKLYLFLETILPAI 654
Query: 422 CESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARK 481
ESL VE+ QKVK ++RL K +L +R K+ + D + G P +++ A+RA+K
Sbjct: 655 QESLYVESFNQKVKGRKRLPKSVLAERAKLLEDKQDDEVFQGFGPIISRNDRAKASRAKK 714
Query: 482 KIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEA-FREPPLPNLLKNEENQCLIIDLC 540
+ K+ A KEEKKA A AAG+EW S++ D ++ E ++ PLPNLLK++E+ ++ C
Sbjct: 715 VLAKRAAEKEEKKAAALAAGMEWESEEESDGAEAEMELKQSPLPNLLKDDEHYQTLLQAC 774
Query: 541 KALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYIL 600
KALAS+QRY EA E+I+ S+R+ ++ P E+ +ELR+LGA++AY ++D +G++CA+Y++
Sbjct: 775 KALASIQRYWEALEVIHHSLRVGNSLTP-EQHDELRALGAQIAYKTSDARYGYECARYMV 833
Query: 601 QLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASH 660
Q PYSLS WNCYY+V+SR ++ +H KF+ +R K+ DCVP +II GHQF M S
Sbjct: 834 QQRPYSLSMWNCYYQVVSRS---EARVPRHHKFMLQMRNKFADCVPAMIICGHQFAMISQ 890
Query: 661 HQDAARCYLEAYKLLPENPLINL 683
Q A R YL+AYK PE+P INL
Sbjct: 891 SQGALREYLQAYKQQPEDPFINL 913
>gi|302826083|ref|XP_002994584.1| hypothetical protein SELMODRAFT_432497 [Selaginella moellendorffii]
gi|300137377|gb|EFJ04351.1| hypothetical protein SELMODRAFT_432497 [Selaginella moellendorffii]
Length = 1006
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 293/683 (42%), Positives = 445/683 (65%), Gaps = 13/683 (1%)
Query: 6 YGGYRKKTRKLNKKRGRRK----GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
+G R++ K++GR+K ++L P V++ LGEA+L YA ++AI+LLKEVV
Sbjct: 198 FGPKRRRRAGEAKRKGRKKVPGIPGASRLPPEVSRKLGEANLLYATRKNDEAIALLKEVV 257
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
RL+PN P+ Y+TLGL + A+G+ K A +FY+I AHL PKD+ALWK+L +++ + G+T Q
Sbjct: 258 RLAPNAPDAYHTLGLLYDAMGDRKKALNFYMICAHLKPKDAALWKRLASWSTELGNTGQV 317
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
++ + +AIRA+P DI + AS Y EI D++KAA+++EQ+ L +V+ K A++
Sbjct: 318 IHCLTKAIRADPDDIDAKWDRASLYAEILDFQKAADAFEQMLVLRSSDVEVCKMVAKMQH 377
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
K G R+ +LE+++ H ++AD + ++LL + M N Y L I+ A+ + G+
Sbjct: 378 KNGNIQRATEVLEKFIDEHSAEADFAAVNLLAELHMGNRNYAAALSQIDRARQMYCHGQA 437
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
LPL L +K+GIC++ LGN+ AE F DL+ + D ADL+ +V DT +S+G + AL Y
Sbjct: 438 LPLDLSIKSGICHVHLGNLLAAERDFEDLRKEGLDDLADLVLDVGDTYLSVGRHHDALGY 497
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
Y LE N DNG L LK+AECY+++ AI +Y+ +++ ++DARLTLASLLL
Sbjct: 498 YIILEGNDAYDNGTLSLKIAECYMAVDALEDAIRVYYRVMEKLPQHVDARLTLASLLLRC 557
Query: 362 AKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLV 421
++ ++AI LL PP+ D+ S WW N +I MKL IY +G F++ I P +
Sbjct: 558 SRLDDAINLLKPPQVTDT----SVSGLYWWQNGRIKMKLAEIYHGQGKLYLFLETILPAI 613
Query: 422 CESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARK 481
ESL VE+ QKVK ++RL K +L +R K+ + D + G P +++ A+RA+K
Sbjct: 614 QESLYVESFNQKVKGRKRLPKSVLAERAKLLEDKQDDEVFQGFGPIISRNDRAKASRAKK 673
Query: 482 KIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEA-FREPPLPNLLKNEENQCLIIDLC 540
+ K+ A KEEKKA A AAG+EW S++ D ++ E ++ PLPNLLK++E+ ++ C
Sbjct: 674 VLAKRAAEKEEKKAAALAAGMEWESEEESDGAEAEMELKQSPLPNLLKDDEHYQTLLQAC 733
Query: 541 KALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYIL 600
KALAS+QRY EA E+I+ S+R+ ++ P E+ +ELR+LGA++AY ++D +G++CA+Y++
Sbjct: 734 KALASIQRYWEALEVIHHSLRVGNSLTP-EQHDELRALGAQIAYKTSDARYGYECARYMV 792
Query: 601 QLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASH 660
Q PYSLS WNCYY+V+SR ++ +H KF+ +R K+ DCVP +II GHQF M S
Sbjct: 793 QQRPYSLSMWNCYYQVVSRS---EARVPRHHKFMLQMRNKFADCVPAMIICGHQFAMISQ 849
Query: 661 HQDAARCYLEAYKLLPENPLINL 683
Q A R YL+AYK PE+P INL
Sbjct: 850 SQGALREYLQAYKQQPEDPFINL 872
>gi|326529757|dbj|BAK04825.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 908
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 280/666 (42%), Positives = 423/666 (63%), Gaps = 27/666 (4%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
GR KG +N+ P V K LG+A+L + F++AI +L E+VR++PNLP +YN LG +
Sbjct: 138 GRAKGRRNRCGPEVIKKLGDATLLFTENRFKEAIPILHEIVRIAPNLPNSYNLLGSIYKE 197
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
G A +F ++AA++SPKD ++W++L+ A++K D A A + + +A+RA+P+D+ L+
Sbjct: 198 NGEIDKAINFVMLAAYVSPKDVSMWRKLIDLALKKEDAALARHCVIKAMRADPEDVGLKF 257
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
A+ Y +GD KAAE YEQI + P N A K AQ++ Q ++I +LEE++
Sbjct: 258 DCANIYRTLGDCHKAAEIYEQIVGINPSNTVARKAAAQMYRDSAQVDKAISLLEEFVNAQ 317
Query: 201 PSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM 260
++ D ++DLL+++ + ++A+ + L I+ AQ+V SG++LP++L+ K IC LG+M
Sbjct: 318 TANVDWGLLDLLISLYLRSDAHGEALGQIQKAQLVLGSGQKLPVRLQAKQVICQAYLGDM 377
Query: 261 EKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKL 320
+ AE+ + + ++AD++ EVA TL SLG ALK+Y +E A ++G Y++
Sbjct: 378 KHAEVFLQGVHLGRSKENADMVKEVASTLQSLGQYEYALKFYSMMEDVAVHNDGSSYVEA 437
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPK--DLD 378
A+CY+ + E+ AI YKAL+ EDN+D R+TL+SLL++E K EAI LLSPP+ +L
Sbjct: 438 AQCYMVMGEKGKAIPCLYKALEGMEDNVDVRITLSSLLVDEDKSNEAIKLLSPPENPELQ 497
Query: 379 SLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKR 438
S D+ D PWWL+ ++ M+L +Y KG+ ++FV+ IF + E+L +E ++VKV R
Sbjct: 498 SADI-PDHQKPWWLDGEVKMQLAKLYYNKGIMKEFVETIFLPILETLDIEYANRRVKVHR 556
Query: 439 RLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAK 498
+LT +LQ+RTK+ DS+ G RP A +EL+ A RA++ ++K+ A
Sbjct: 557 KLTNDVLQERTKVLGEARQDSVFQGCRPIASTAELVKANRAKRLLEKRAA---------- 606
Query: 499 AAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINL 558
+DD + + A + PPLP LL N +N L++DLC+ L LQRY EA +IIN
Sbjct: 607 ------SNDDMMKDDTRRAKQAPPLPGLLTNVDNHQLVLDLCRTLTLLQRYFEALQIINH 660
Query: 559 SMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLS 618
+++L L + KEELRSLGA++AY + DP+ GFD +Y++ HP S+SAWN YYKV S
Sbjct: 661 ALKLGNEPLSDDIKEELRSLGAEIAYRAPDPSPGFDYVRYVVHKHPQSISAWNSYYKVTS 720
Query: 619 RMGKINSKHSKHSKFIRYLRAKYK-DCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPE 677
R ++ H KF+ LRA+ CVPP IISGH+FT S HQ A R YLEAY+L PE
Sbjct: 721 R-----TEEKGHFKFL--LRARRDPKCVPPKIISGHRFTAISQHQSAVRDYLEAYRLDPE 773
Query: 678 NPLINL 683
NPLINL
Sbjct: 774 NPLINL 779
>gi|222615816|gb|EEE51948.1| hypothetical protein OsJ_33584 [Oryza sativa Japonica Group]
Length = 931
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 287/733 (39%), Positives = 421/733 (57%), Gaps = 99/733 (13%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFE-------------- 51
+G RK+ K +KRGR+KG++NK SP VTK LG+A+L + F+
Sbjct: 114 FGLRRKRRSKDARKRGRKKGTRNKYSPEVTKKLGDATLLFTESRFKEDDSNLYLVYSTKL 173
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI +L EVVR++PNL +Y+ LG + G A +F ++AA++SPKD LWK+L+
Sbjct: 174 QAIPILHEVVRIAPNLSNSYHLLGSIYKECGELDKAINFLMLAAYVSPKDVFLWKKLIDM 233
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
A++K D A A + + +A+RA+P+D+ L+ A+ Y + DY+KA E YEQI +++P N+
Sbjct: 234 ALKKEDAALARHCVLKAMRADPEDVGLKFDCANIYRALHDYQKAGEIYEQIVRIYPSNIV 293
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
A K AQ++ CGQ ++I +LE+Y+ ++ D + +DLL+++ + NNAY + L+ IE
Sbjct: 294 ARKAAAQMYRDCGQIDKAINLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIER 353
Query: 232 AQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMS 291
A IV S LP++L+ KA IC+ LG+M+ AE+ ++ + + D+ D+I EVA TL +
Sbjct: 354 AHIVFGSQHNLPVQLQAKAVICHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLEN 413
Query: 292 LGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYK------------ 339
LG A+K+Y +E A ++G Y+K+ +CY+ + E+ AI +F K
Sbjct: 414 LGQYEYAIKFYLMIEDVAVHNDGSSYVKVGQCYMVIGEKRKAIPYFQKVSPDDRDKANTD 473
Query: 340 -----------------------------ALDRFEDNIDARLTLASLLLEEAKEEEAITL 370
AL R EDNID R+TL+SL ++ K +EAI L
Sbjct: 474 ESDLTFIPVSDPYPIHESMSITYKIVNLEALQRMEDNIDVRITLSSLFVDVDKSDEAIVL 533
Query: 371 LSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEAL 430
LSPP + S +D+ PWWL+ K+ M L +IY KGM EDFV I + E+L +E
Sbjct: 534 LSPPNNSGSKSA-TDQPKPWWLDGKVKMHLANIYYNKGMFEDFVGTILIPILETLNIEYA 592
Query: 431 RQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALK 490
+KV+ ++L +L +R K+ +S+ G+RP A +EL A+RA+K ++K+ A
Sbjct: 593 NRKVRKAKKLPTNVLYERAKVLAEQRPESVFQGLRPIASPAELQKASRAKKLLEKRAASN 652
Query: 491 EEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYE 550
E+ DD LC+ LA L RY
Sbjct: 653 EDTI-----------KDDL-----------------------------LCQTLALLHRYW 672
Query: 551 EASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAW 610
EA ++IN +++L + L E KEELRSLGA++AY + DP HGF+ +Y++Q HPYSL+AW
Sbjct: 673 EALQVINRTLKLGNDTLADENKEELRSLGAQIAYRAPDPRHGFNYVRYVVQQHPYSLAAW 732
Query: 611 NCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLE 670
N YYKV SR I + S+H KF+ R + DCVPPIIISGH+FT S HQ AAR YLE
Sbjct: 733 NSYYKVTSR---IEDRFSRHHKFLLRTREEKTDCVPPIIISGHRFTAISQHQSAARDYLE 789
Query: 671 AYKLLPENPLINL 683
AYKL PENP INL
Sbjct: 790 AYKLNPENPFINL 802
>gi|218185556|gb|EEC67983.1| hypothetical protein OsI_35748 [Oryza sativa Indica Group]
Length = 931
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/733 (39%), Positives = 422/733 (57%), Gaps = 99/733 (13%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFE-------------- 51
+G RK+ K +KRGR+KG++NK SP VTK LG+A+L + F+
Sbjct: 114 FGLRRKRRSKDARKRGRKKGTRNKYSPEVTKKLGDATLLFTESRFKEDDSNLYLVYSTKL 173
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI +L EVVR++PNL +Y+ LG + G A +F ++AA++SPKD LWK+L+
Sbjct: 174 QAIPILHEVVRIAPNLSNSYHLLGSIYKECGELDKAINFLMLAAYVSPKDVFLWKKLIDM 233
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
A++K D A A + + +A+RA+P+D+ L+ A+ Y + DY+KA E YEQI +++P N+
Sbjct: 234 ALKKEDAALARHCVLKAMRADPEDVGLKFDCANIYRALRDYQKAGEIYEQIVRIYPSNIV 293
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
A K AQ++ CGQ ++I +LE+Y+ ++ D + +DLL+++ + NNAY + L+ I+
Sbjct: 294 ARKAAAQMYRDCGQIDKAINLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIDR 353
Query: 232 AQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMS 291
A IV S LP++L+ KA IC+ LG+M+ AE+ ++ + + D+ D+I EVA TL +
Sbjct: 354 AHIVFGSQHNLPVQLQAKAVICHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLEN 413
Query: 292 LGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYK------------ 339
LG A+K+Y +E A ++G Y+K+ +CY+ + E+ AI +F K
Sbjct: 414 LGQYEYAIKFYLMIEDVAVHNDGSSYVKVGQCYMVIGEKRKAIPYFQKVSPDDRDKANTD 473
Query: 340 -----------------------------ALDRFEDNIDARLTLASLLLEEAKEEEAITL 370
AL R EDNID R+TL+SL ++ K +EAI L
Sbjct: 474 ESDLTFIPVSDPYPIHESMSITYKIVNLEALQRMEDNIDVRITLSSLFVDVDKSDEAIVL 533
Query: 371 LSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEAL 430
LSPP + S +D+ PWWL+ K+ M L +IY KGM EDFV I + E+L +E
Sbjct: 534 LSPPNNSGSKSA-TDQPKPWWLDGKVKMHLANIYYNKGMFEDFVGTILIPILETLNIEYA 592
Query: 431 RQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALK 490
+KV+ ++L +L +R K+ +S+ G+RP A +EL A+RA+K ++K+ A
Sbjct: 593 NRKVRKAKKLPTNVLYERAKVLAEQRPESVFQGLRPIASPAELQKASRAKKLLEKRAASN 652
Query: 491 EEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYE 550
E+ DD LC+ LA L RY
Sbjct: 653 EDTI-----------KDDL-----------------------------LCQTLALLHRYW 672
Query: 551 EASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAW 610
EA ++IN +++L + L E KEELRSLGA++AY + DP HGF+ +Y++Q HPYSL+AW
Sbjct: 673 EALQVINRTLKLGNDTLADENKEELRSLGAQIAYRAPDPRHGFNYVRYVVQQHPYSLAAW 732
Query: 611 NCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLE 670
N YYKV SR I + S+H KF+ +R + DCVPPIIISGH+FT S HQ AAR YLE
Sbjct: 733 NSYYKVTSR---IEDRFSRHHKFLLRIREEKTDCVPPIIISGHRFTAISQHQSAARDYLE 789
Query: 671 AYKLLPENPLINL 683
AYKL PENP INL
Sbjct: 790 AYKLNPENPFINL 802
>gi|62734220|gb|AAX96329.1| TPR Domain, putative [Oryza sativa Japonica Group]
Length = 969
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 293/751 (39%), Positives = 430/751 (57%), Gaps = 97/751 (12%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFE-------------- 51
+G RK+ K +KRGR+KG++NK SP VTK LG+A+L + F+
Sbjct: 114 FGLRRKRRSKDARKRGRKKGTRNKYSPEVTKKLGDATLLFTESRFKEDDSNLYLVYSTKL 173
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI +L EVVR++PNL +Y+ LG + G A +F ++AA++SPKD LWK+L+
Sbjct: 174 QAIPILHEVVRIAPNLSNSYHLLGSIYKECGELDKAINFLMLAAYVSPKDVFLWKKLIDM 233
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
A++K D A A + + +A+RA+P+D+ L+ A+ Y + DY+KA E YEQI +++P N+
Sbjct: 234 ALKKEDAALARHCVLKAMRADPEDVGLKFDCANIYRALHDYQKAGEIYEQIVRIYPSNIV 293
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
A K AQ++ CGQ ++I +LE+Y+ ++ D + +DLL+++ + NNAY + L+ IE
Sbjct: 294 ARKAAAQMYRDCGQIDKAINLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIER 353
Query: 232 AQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL-- 289
A IV S LP++L+ KA IC+ LG+M+ AE+ ++ + + D+ D+I EVA TL
Sbjct: 354 AHIVFGSQHNLPVQLQAKAVICHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLEN 413
Query: 290 ---------------------------------MSLGHSNSALKYYH------------- 303
M +G A+ Y+
Sbjct: 414 LGQYEYAIKFYLMIEDVAVHNDGSSYVKVGQCYMVIGEKRKAIPYFQKVTSQAYCSCWGV 473
Query: 304 -----FLETNAGTDNGYL-YLKLAECYLSLKERAHAIMFFYK-----ALDRFEDNIDARL 352
L NA TD L ++ +++ Y + E ++ YK AL R EDNID R+
Sbjct: 474 TCISKVLLRNANTDESDLTFIPVSDPY-PIHE---SMSITYKIVNLEALQRMEDNIDVRI 529
Query: 353 TLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPED 412
TL+SL ++ K +EAI LLSPP + S +D+ PWWL+ K+ M L +IY KGM ED
Sbjct: 530 TLSSLFVDVDKSDEAIVLLSPPNNSGSKSA-TDQPKPWWLDGKVKMHLANIYYNKGMFED 588
Query: 413 FVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSE 472
FV I + E+L +E +KV+ ++L +L +R K+ +S+ G+RP A +E
Sbjct: 589 FVGTILIPILETLNIEYANRKVRKAKKLPTNVLYERAKVLAEQRPESVFQGLRPIASPAE 648
Query: 473 LLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEEN 532
L A+RA+K ++K+ A E DT + Q + + PP+ LL N EN
Sbjct: 649 LQKASRAKKLLEKRAASNE----------------DTIKDDLQRSKQIPPISGLLTNAEN 692
Query: 533 QCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHG 592
L++ LC+ LA L RY EA ++IN +++L + L E KEELRSLGA++AY + DP HG
Sbjct: 693 HQLVLHLCQTLALLHRYWEALQVINRTLKLGNDTLADENKEELRSLGAQIAYRAPDPRHG 752
Query: 593 FDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISG 652
F+ +Y++Q HPYSL+AWN YYKV SR I + S+H KF+ R + DCVPPIIISG
Sbjct: 753 FNYVRYVVQQHPYSLAAWNSYYKVTSR---IEDRFSRHHKFLLRTREEKTDCVPPIIISG 809
Query: 653 HQFTMASHHQDAARCYLEAYKLLPENPLINL 683
H+FT S HQ AAR YLEAYKL PENP INL
Sbjct: 810 HRFTAISQHQSAARDYLEAYKLNPENPFINL 840
>gi|224121752|ref|XP_002330644.1| predicted protein [Populus trichocarpa]
gi|222872248|gb|EEF09379.1| predicted protein [Populus trichocarpa]
Length = 686
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/435 (59%), Positives = 340/435 (78%), Gaps = 1/435 (0%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
E++N+G +K+ R++ K+RGRRKGSKNKLSP +T+MLG+A+L YA+GN+E+A+++L EVV
Sbjct: 111 EIMNFGMRKKRRRRMPKRRGRRKGSKNKLSPEITRMLGDATLHYAHGNYEEALTVLSEVV 170
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
+ +P + ++Y+TLGL H ALGN + A FY IAA L PKDS+LWK L ++ V++GD A+A
Sbjct: 171 KRAPLVADSYHTLGLVHKALGNTEKAMKFYRIAAFLRPKDSSLWKLLFSWHVEQGDIARA 230
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
+ +AI A+P DISLR A FY E+GD+++AAESYEQI ++ P++V+A KT A++ L
Sbjct: 231 WKCLSKAISADPDDISLRSLHALFYDELGDHQRAAESYEQIVRICPEDVEAIKTAAKMHL 290
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
CGQ R +GILE+YLK HPS+ADLSVI LL + ME +A+ LQHIEHAQ++ +SGKE
Sbjct: 291 NCGQIKRCVGILEDYLKGHPSEADLSVIILLADVFMEIDAHNNALQHIEHAQMIYYSGKE 350
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
LPL+L +KAGIC++ LGN+EKAEI F+ LQ +N H + IT+VAD MS +SALKY
Sbjct: 351 LPLELMIKAGICHVFLGNIEKAEIHFSALQQENFSIHPEFITKVADAFMSTECFHSALKY 410
Query: 302 YHFLETNAGTDN-GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
YH LE N G DN G +++K+A+CYLSL +RA AIMFFYKAL +D+IDAR+ LASL+LE
Sbjct: 411 YHMLELNVGADNEGEIHVKIAQCYLSLNDRAKAIMFFYKALPMLKDSIDARVALASLILE 470
Query: 361 EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL 420
+AKE+EAI+LLSPPKDLDSLD NS NPWWL+ KI +KLCHIY+AKGM EDFV+ I PL
Sbjct: 471 DAKEDEAISLLSPPKDLDSLDSNSYMQNPWWLDGKIKLKLCHIYKAKGMLEDFVNTISPL 530
Query: 421 VCESLCVEALRQKVK 435
V ESL V+ LR K +
Sbjct: 531 VRESLYVKTLRPKTE 545
>gi|30685450|ref|NP_850945.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
gi|30685455|ref|NP_173210.3| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
gi|26983808|gb|AAN86156.1| unknown protein [Arabidopsis thaliana]
gi|332191499|gb|AEE29620.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
gi|332191500|gb|AEE29621.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
Length = 896
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/660 (41%), Positives = 405/660 (61%), Gaps = 35/660 (5%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-N 83
GSK +++P + K EA +A+G +A+ +L EV++ +P Y L LG
Sbjct: 143 GSKKEVAPDILKRFREALFLHAHGRDIEALPILVEVIKQAPAFDIAYYYLSRVSEQLGKT 202
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
S+ + IAA++ S WK L ++ + + A Y +AI+A+P DI L+ A
Sbjct: 203 ESSSTEALKIAANIKGSKSPFWKLLYERFKEQENISVARSYASKAIQADPDDIPLKYEYA 262
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ G Y +AAE++EQI + P+ ++A K G Q FLK G+ R+ ILE+++K H S+
Sbjct: 263 DICLNTGKYREAAETFEQIFRRCPERIEALKWGVQYFLKSGEGERAASILEDHIKSHSSE 322
Query: 204 ADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
V+DLL ++ M+ NA+++ L++I + + GKEL LK++ IC++ L ME+A
Sbjct: 323 VGHDVLDLLASVFMKINAHDRALKYIHDVRQIYNVGKELSSSLKIRQAICHVHLEEMEQA 382
Query: 264 EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAEC 323
E + + L + +H +LIT +AD L ++G+ +SALKYY +E + NG L++K+A C
Sbjct: 383 ESVLSILPQEAVSEHPELITNLADELTNIGNFHSALKYY--IEAISEPVNGNLFVKIARC 440
Query: 324 YLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMN 383
Y+SL+ER AI+F+YKAL+ D +D R+TLASLLLE+ K +EA+ +LSPP++ D +
Sbjct: 441 YMSLEERKQAIVFYYKALNELSDTVDVRITLASLLLEDGKRDEAVLVLSPPENPDP---D 497
Query: 384 SDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKG 443
+ K WW N KI M LC IY ++GM EDF + LV + + R+ VK KR+
Sbjct: 498 TAKLKAWWKNRKIRMNLCQIYHSEGMLEDFANTALQLVLKWV----WRRTVKGKRKRLVL 553
Query: 444 ILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAAGVE 503
QR K P D+ +R P KK +K A E + + + A ++
Sbjct: 554 SEHQRNK-KRRRPRDAQASQLR-GGP-----------KKWRKIRATLNETRRIRERAAIK 600
Query: 504 WHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLA 563
H++D ES++E ++K+EE L +DLCKALASLQRY EA EI+NL+ RL
Sbjct: 601 AHNEDVCSESEEE---------VIKDEEYHRLFVDLCKALASLQRYWEALEIVNLARRLD 651
Query: 564 YNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKI 623
+LP+E K+EL+SLGAK++ D+ DP FDC + ++Q HPY L+AWNCYY V+SR+GK
Sbjct: 652 AKMLPVETKKELQSLGAKISCDTMDPKQWFDCVRSVIQQHPYRLNAWNCYYSVISRLGK- 710
Query: 624 NSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
+ S +KF+ +LR+KY+DCVPPI+I+GH FT+ S HQDAAR YLEAYKL+PE+PLINL
Sbjct: 711 --RASTEAKFMHHLRSKYRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPESPLINL 768
>gi|297844724|ref|XP_002890243.1| hypothetical protein ARALYDRAFT_471977 [Arabidopsis lyrata subsp.
lyrata]
gi|297336085|gb|EFH66502.1| hypothetical protein ARALYDRAFT_471977 [Arabidopsis lyrata subsp.
lyrata]
Length = 892
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/661 (41%), Positives = 405/661 (61%), Gaps = 36/661 (5%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN- 83
GSK +++P + K EA +A+G +A+ +L EV++ +P Y L LG
Sbjct: 138 GSKKEVAPDILKRFREALFLHAHGRDIEALPILVEVIKQAPAFDIAYYYLSRVSEQLGRA 197
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
S+ + IAA++ S WK L ++ D A A Y +AI+A+P DI L+ A
Sbjct: 198 ESSSTEALKIAANIKGSKSPFWKLLYERFKEQEDMAVARSYASKAIQADPDDIPLKYEYA 257
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ G Y +AAE+YEQI + P+ ++ K G + FLK G+ R+ ILE+++K H S+
Sbjct: 258 DLCLNAGKYREAAETYEQIFRRCPERIETLKWGIEYFLKSGEGERAASILEDHIKSHSSE 317
Query: 204 ADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
++DLL ++ M+ N +++ L++I + + GKEL LK++ IC++ L ME+A
Sbjct: 318 VGHDILDLLASVFMQINVHDRALKYIHDVRQIYNVGKELSSSLKIRQAICHVHLEEMEQA 377
Query: 264 EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLET-NAGTDNGYLYLKLAE 322
E + + L + +H +LIT +AD L ++G+ +SALKYY LE + +NGYL++K+A
Sbjct: 378 ESVLSILPQEAVSEHPELITNLADELTNIGNFHSALKYY--LEVISEPVNNGYLFVKIAR 435
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDM 382
CY+SL ER AI+F+YKAL+ D +D R+TLASLLLE+ K +EA+ +LSPP++ D
Sbjct: 436 CYMSLAEREQAIVFYYKALNELSDTVDIRITLASLLLEDGKRDEAVLVLSPPENPDP--- 492
Query: 383 NSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTK 442
++ K WW N KI M LC IY ++GM EDF + LV + + R+ VK KR+
Sbjct: 493 DTAKLKAWWKNRKIRMNLCQIYHSEGMLEDFANTALQLVLKWV----WRRTVKGKRKRLV 548
Query: 443 GILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAAGV 502
QR K P D+ +R P KK +K A E + + + A +
Sbjct: 549 LSEHQRNK-KRRRPRDAQASQLR-GGP-----------KKWRKIRATLNETRRIRERAAI 595
Query: 503 EWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRL 562
+ H++D ES++E ++K+EE L +DLCKALASLQRY EA EI+NL+ RL
Sbjct: 596 KAHNEDICSESEEE---------VIKDEEYHRLFVDLCKALASLQRYWEALEIVNLARRL 646
Query: 563 AYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGK 622
+LP+E K+EL+SLGAK++ D+ DP FDC + ++Q HPY L+AWNCYY+V+SR+GK
Sbjct: 647 DAKMLPVETKKELQSLGAKISCDTMDPKQWFDCVRSVIQQHPYRLNAWNCYYRVISRLGK 706
Query: 623 INSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLIN 682
+ S +KF+ +LR+KY+DCVPPI+I+GH FT+ S HQDAAR YLEAYKL+P++PLIN
Sbjct: 707 ---RASSEAKFMHHLRSKYRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPDSPLIN 763
Query: 683 L 683
L
Sbjct: 764 L 764
>gi|168001300|ref|XP_001753353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695639|gb|EDQ81982.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 926
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 269/725 (37%), Positives = 418/725 (57%), Gaps = 94/725 (12%)
Query: 30 LSPGVTKMLGEASLQYAYGNFE-----------QAISLLKEVVRLSPNLPETYNTLGLAH 78
L+P + K LGEA+L YA G F+ QA+ +LKEVVR++PN+ ++Y+TLGL +
Sbjct: 92 LTPEINKKLGEANLLYATGQFDEVITTLMCGYSQAVEILKEVVRIAPNVADSYHTLGLLY 151
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
A G+ K A +FY+IAAHL+PKD LWK+L +++++ G+ Q +Y +++A+RA+P D+
Sbjct: 152 DAKGDRKRALNFYMIAAHLTPKDIVLWKRLASWSMELGNPGQVIYCLQKAMRADPTDVDA 211
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
R AS Y E+ ++ KA + EQ+ L P +V+ K A++ K GQ+ ++ +LE ++
Sbjct: 212 RWDCASLYAELNEFPKAIDCLEQLLALRPGDVEICKMVAKMRQKNGQSEQATQLLEHLIE 271
Query: 199 VHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLG 258
+P +ADLS ++LL + M N A+ T+ I+ A+ + + + LPL L VKAGIC+ LG
Sbjct: 272 TYPYEADLSAVNLLAELHMANGAFAITISWIDRARELYSADQPLPLDLSVKAGICHAYLG 331
Query: 259 NMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYL 318
++E AE F L+ + + ADLI EV D ++LG SAL+YY L N+ D+ L+L
Sbjct: 332 DLESAERNFEGLRTEQVDECADLILEVGDAYLALGEHKSALRYYELLYDNSSFDDVVLWL 391
Query: 319 KLAECYLSLKERAHAI--------------------------------MFF--------- 337
KLA+C+++L A AI +FF
Sbjct: 392 KLAQCHMALGSSADAIRVYQQGIISTSVQICEEVILVLLLGQLPLVLALFFCVLSYLFII 451
Query: 338 ----------YKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD-- 385
+ N++ RL+LASLL + ++ EAI+LL PP DS D+ +D
Sbjct: 452 ITIFIILEWLITVIKDMPQNVETRLSLASLLCDSGRQNEAISLLVPP---DSEDITTDAD 508
Query: 386 ---KSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKV----KVKR 438
K PWW + K+++KL +IY ++ +FVD + PL+ ESL VE+L QKV K ++
Sbjct: 509 TQAKEQPWWKHGKVVVKLANIYLSQSRLTEFVDTLLPLLHESLYVESLNQKVFQKGKTRK 568
Query: 439 RLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAK 498
RL K IL +R + D + G RP ++++ A+RAR+ + EA E + +
Sbjct: 569 RLNKTILAERVQWLEQQLDDQVFQGFRPVLSRNDMTKASRARRMLANDEAEHEHEPEPVE 628
Query: 499 AAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINL 558
+ + PLPNLLK+EE+ L++ +CKAL L+RY EA EI++
Sbjct: 629 EVQI----------------KVSPLPNLLKDEEHYQLVLQVCKALLLLKRYWEALEIVHH 672
Query: 559 SMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLS 618
+R+ ++ + K +ELR+LGA++AY + D +G+DC +Y++Q PYS S WN YY+V+S
Sbjct: 673 ILRIGSHLGKV-KCDELRALGAQIAYKTKDVKYGYDCVRYMVQQRPYSFSMWNAYYQVVS 731
Query: 619 RMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPEN 678
R + SKHSK++ +R KY DCVP ++I GHQ+ M S Q A R YL+AY++ P++
Sbjct: 732 RS---EVRLSKHSKYMLSVRGKYPDCVPAMVICGHQYAMISQPQGALREYLQAYQVQPDD 788
Query: 679 PLINL 683
P INL
Sbjct: 789 PFINL 793
>gi|225462328|ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Vitis vinifera]
Length = 1110
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/370 (61%), Positives = 291/370 (78%), Gaps = 20/370 (5%)
Query: 314 GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSP 373
G+L+LK+A+CYLSLKER AI FFYKALD +DNIDARLTLA+LLLE AKE+EAI LLSP
Sbjct: 633 GFLHLKIAQCYLSLKERVQAIPFFYKALDVLQDNIDARLTLATLLLEGAKEDEAILLLSP 692
Query: 374 PKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQK 433
PK+L +D NSD+ PWWLN K+ +KL HIYR+KGM ++FVDAIFPLV ESL VE L+QK
Sbjct: 693 PKNL-GMDPNSDEFQPWWLNGKVKLKLSHIYRSKGMSDEFVDAIFPLVRESLFVETLKQK 751
Query: 434 VKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEK 493
V+VK+RL+K +L +R K+ ++ +D++ G RP A S+L A+RA+K +QKK KEE+
Sbjct: 752 VRVKKRLSKSVLFERVKVLDDHHSDNVFHGFRPMASTSDLSKASRAKKLLQKKATRKEER 811
Query: 494 KALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEAS 553
KA A ++ REPPLPNLLK+EE+ LI+DLCKALASL++Y EA
Sbjct: 812 KAAA----------------MEQKLREPPLPNLLKDEEHHHLILDLCKALASLRKYWEAL 855
Query: 554 EIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCY 613
+IINL++RLAYNI+P+EKKEELRSLGA++AY+ TDP HGFD KYI+Q HP+SL+AWNCY
Sbjct: 856 DIINLTLRLAYNIMPIEKKEELRSLGAQIAYNITDPKHGFDYVKYIVQQHPHSLAAWNCY 915
Query: 614 YKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYK 673
YKV+SR+ +++SKHSK + +R ++KDCVPPI+I GHQFTM S HQ AA+ YLEAYK
Sbjct: 916 YKVISRL---ENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQFTMISQHQIAAKEYLEAYK 972
Query: 674 LLPENPLINL 683
L+PENPLINL
Sbjct: 973 LMPENPLINL 982
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 173/289 (59%), Positives = 233/289 (80%), Gaps = 1/289 (0%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
KNKLSP VT+ LGEA+L YA+G +E+AI +LKEVVRL+PNLP+ Y+T GL ++A G+ K
Sbjct: 126 KNKLSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKR 185
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A +FY++AAHL+PKDS+LWK L+T+++++G+T QA Y + +AI A+P+DISLR H AS Y
Sbjct: 186 ALNFYMLAAHLTPKDSSLWKLLVTWSIEQGNTGQARYCLSKAITADPEDISLRFHRASLY 245
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
VE+G+Y+KAAESYEQI +LFP+NV+A KTGA+L+ KCGQ RS+ ILE+Y+K HP+ ADL
Sbjct: 246 VELGEYQKAAESYEQISQLFPENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADL 305
Query: 207 SVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEIL 266
S++D+L A+ MENN +++ LQHIEHAQ++ SGK+LPL L +KAGIC++ LGN+EKAE L
Sbjct: 306 SIVDMLAAVCMENNVHDRALQHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKAEAL 365
Query: 267 FADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY 315
F+ LQ + DHA LI+EVAD+ MSL + ALKYY LE N G DN +
Sbjct: 366 FSVLQ-RETCDHAGLISEVADSFMSLELYDFALKYYLMLEGNVGRDNWF 413
>gi|413921074|gb|AFW61006.1| hypothetical protein ZEAMMB73_735189 [Zea mays]
Length = 676
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/566 (42%), Positives = 349/566 (61%), Gaps = 30/566 (5%)
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
+ A+P+D+ L+ Y + +Y+KAAE YEQI +++P N K AQ++ +CGQ
Sbjct: 1 MNADPEDVDLKYLCGYMYHNLCEYQKAAEIYEQIVRIYPANSAVRKVAAQMYRECGQIDN 60
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKV 248
+I +L++Y + D SV+DLL+++ + NN + + L+ I+ AQ+ S ++LP++L+
Sbjct: 61 AINLLKDYADTQTFNIDWSVLDLLISLYLRNNVFSEALKQIKRAQLHLGSQQKLPVQLQA 120
Query: 249 KAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETN 308
K IC+ G+M+ AEI D++ + + ++ D++ E+A L +G A+K+Y +E
Sbjct: 121 KEVICHAYCGDMKHAEIFLRDVRLEPSKENIDVLKELASNLEKMGRYEYAVKFYLLIENV 180
Query: 309 AGTDNGYL----------YLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
A ++G L Y+K A+CY+ L ++ +AI +FYKAL +DNI RLTL+SLL
Sbjct: 181 ATQNDGGLCFDHKEMGSWYVKAAQCYMILGDKKNAIPYFYKALQSMKDNIGIRLTLSSLL 240
Query: 359 LEEAKEEEAITLLSPPKDLDSLDMNS-DKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAI 417
+++ K +EA TLLSPPK + N+ D+ PWW + K+ M L +Y KG EDFVD I
Sbjct: 241 IDDDKTDEAATLLSPPKIPELQSANTPDQQKPWWCDGKVKMALAKLYYNKGNLEDFVDTI 300
Query: 418 FPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAA 477
F + E+L VE +KVK R+L +L +R K+ DS+ G+RP A EL A
Sbjct: 301 FHPILETLNVEYANRKVKSMRKLPNIVLHERVKVLGEQRPDSVFQGLRPIASPDELQKAN 360
Query: 478 RARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLII 537
RA+K I+K+ A EE K D ++Q PP+P LL N E+ L++
Sbjct: 361 RAKKLIEKRTAANEELK------------HDYLPRTKQ----VPPVPGLLTNVEHHQLVL 404
Query: 538 DLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAK 597
+LC+ LA LQRY +A +IIN +++L + L +KKEELRSLGA++AY + DP+HGF +
Sbjct: 405 NLCRTLALLQRYWDALQIINRTLKLGNDALTGDKKEELRSLGAQIAYRAPDPSHGFKYVR 464
Query: 598 YILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTM 657
Y++Q HPYSL+AWN YYKV+SR I + H K++ R DCVPPIIISGH+FT
Sbjct: 465 YVVQQHPYSLAAWNSYYKVVSR---IEDRFPHHFKYLLRTREANPDCVPPIIISGHRFTA 521
Query: 658 ASHHQDAARCYLEAYKLLPENPLINL 683
S HQ AAR YLEAYKL PENPLINL
Sbjct: 522 ISQHQSAARDYLEAYKLDPENPLINL 547
>gi|357473883|ref|XP_003607226.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
gi|355508281|gb|AES89423.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
Length = 469
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/332 (50%), Positives = 232/332 (69%), Gaps = 7/332 (2%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
E IN+G ++ +K +KKRGR+KGSK KL +++MLG+A + YA G + AIS+L EVV
Sbjct: 135 EFINFGEGKRPRKKRSKKRGRQKGSKKKLDEKISQMLGDAHVHYANGRHKMAISVLHEVV 194
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
RL PNLP++Y+TLGL H A+G+H++ FY+I AHL+PKD LWK L +++ + D QA
Sbjct: 195 RLEPNLPDSYHTLGLVHGAIGDHENEMGFYMITAHLTPKDPTLWKTLYVWSIGQDDIGQA 254
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
Y I +AI+A+P+D SLR H A Y E +Y+KAAE+YEQ+ +L +NVDA K A+ +
Sbjct: 255 SYCISKAIKADPQDSSLRSHQAMLYAESQNYQKAAEAYEQVYQLCRENVDALKAAAKYYQ 314
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
KCGQ RSI ILE+YLK P + SV+DLL AILME A+++ LQ+IE +Q+V GKE
Sbjct: 315 KCGQVERSICILEDYLKNKPDGVNASVVDLLGAILMEIKAHDRALQYIEQSQVV---GKE 371
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
LPL LKVKAGIC++ LGN+E A++ F DL+ +NA H + ITEVAD+ M LGH NSAL Y
Sbjct: 372 LPLNLKVKAGICHVHLGNLEMAQVFFNDLKPENASKHVESITEVADSFMGLGHYNSALNY 431
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
+ LE N+ ++ K+ L + ER H+
Sbjct: 432 FKMLEGNSKNEDVCGMAKV----LVISERQHS 459
>gi|9802741|gb|AAF99810.1|AC034257_2 Unknown protein [Arabidopsis thaliana]
Length = 815
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 245/420 (58%), Gaps = 22/420 (5%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-N 83
GSK +++P + K EA +A+G +A+ +L EV++ +P Y L LG
Sbjct: 143 GSKKEVAPDILKRFREALFLHAHGRDIEALPILVEVIKQAPAFDIAYYYLSRVSEQLGKT 202
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
S+ + IAA++ S WK L ++ + + A Y +AI+A+P DI L+ A
Sbjct: 203 ESSSTEALKIAANIKGSKSPFWKLLYERFKEQENISVARSYASKAIQADPDDIPLKYEYA 262
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ G Y +AAE++EQI + P+ ++A K G Q FLK G+ R+ ILE+++K H S+
Sbjct: 263 DICLNTGKYREAAETFEQIFRRCPERIEALKWGVQYFLKSGEGERAASILEDHIKSHSSE 322
Query: 204 ADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
V+DLL ++ M+ NA+++ L++I + + GKEL LK++ IC++ L ME+A
Sbjct: 323 VGHDVLDLLASVFMKINAHDRALKYIHDVRQIYNVGKELSSSLKIRQAICHVHLEEMEQA 382
Query: 264 EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAEC 323
E + + L + +H +LIT +AD L ++G+ +SALKYY +E + NG L++K+A C
Sbjct: 383 ESVLSILPQEAVSEHPELITNLADELTNIGNFHSALKYY--IEAISEPVNGNLFVKIARC 440
Query: 324 YLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKD------- 376
Y+SL+ER AI+F+YKAL+ D +D R+TLASLLLE+ K +EA+ +LSPP++
Sbjct: 441 YMSLEERKQAIVFYYKALNELSDTVDVRITLASLLLEDGKRDEAVLVLSPPENPEAVHCF 500
Query: 377 ------------LDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCES 424
D++D ++ K WW N KI M LC IY ++GM EDF + LV +S
Sbjct: 501 IKQYFDSFDAKFCDNVDPDTAKLKAWWKNRKIRMNLCQIYHSEGMLEDFANTALQLVLKS 560
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 82/103 (79%), Gaps = 3/103 (2%)
Query: 581 KMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAK 640
K++ D+ DP FDC + ++Q HPY L+AWNCYY V+SR+GK + S +KF+ +LR+K
Sbjct: 588 KISCDTMDPKQWFDCVRSVIQQHPYRLNAWNCYYSVISRLGK---RASTEAKFMHHLRSK 644
Query: 641 YKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
Y+DCVPPI+I+GH FT+ S HQDAAR YLEAYKL+PE+PLINL
Sbjct: 645 YRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPESPLINL 687
>gi|147841879|emb|CAN60433.1| hypothetical protein VITISV_020389 [Vitis vinifera]
Length = 1463
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 205/328 (62%), Gaps = 37/328 (11%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
KNKLSP VT+ LGEA+L YA+G +E+AI +LKEVVRL+PNLP+ Y+T GL ++A G+ K
Sbjct: 126 KNKLSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKR 185
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKG--------DTAQAMYYIRQAIRAEPKDISL 138
A +FY++AAHL+PKDS+LWK L+T++++K D Q + + R +P +
Sbjct: 186 ALNFYMLAAHLTPKDSSLWKLLVTWSIKKDLTEKIPEEDKGQDLASETEGDRCKPSSDRM 245
Query: 139 RIHLASF-----------YVEIGDYEKAAESYEQIQKLFPDNVDATKTG----------- 176
R +S + E G E E ++F G
Sbjct: 246 RSSKSSISESERLWRKLKFQEKGRVEPRIEEI----RIFLSETTLNNPGYWDPKGKVIFC 301
Query: 177 --AQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQI 234
QL+ KCGQ RS+ ILE+Y+K HP+ ADLS++D+L A+ MENN +++ LQHIEHAQ+
Sbjct: 302 LPFQLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRALQHIEHAQL 361
Query: 235 VRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGH 294
+ SGK+LPL L +KAGIC++ LGN+EKAE LF+ LQ + DHA LI+EVAD+ MSL
Sbjct: 362 LYCSGKDLPLHLTIKAGICHIHLGNIEKAEALFSVLQ-RETCDHAGLISEVADSFMSLEL 420
Query: 295 SNSALKYYHFLETNAGTDNGYLYLKLAE 322
+ ALKYY LE N G DN + + +++
Sbjct: 421 YDFALKYYLMLEGNVGRDNKWFTVVISK 448
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 80/95 (84%), Gaps = 1/95 (1%)
Query: 340 ALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDS-LDMNSDKSNPWWLNEKIIM 398
ALD +DNIDARLTLA+LLLE AKE+EAI LLSPPK+L+S +D NSD+ PWWLN K+ +
Sbjct: 1040 ALDVLQDNIDARLTLATLLLEGAKEDEAILLLSPPKNLESTVDPNSDEFQPWWLNGKVKL 1099
Query: 399 KLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQK 433
KL HIYR+KGM ++FVDAIFPLV ESL VE L+QK
Sbjct: 1100 KLSHIYRSKGMSDEFVDAIFPLVRESLFVETLKQK 1134
>gi|357473877|ref|XP_003607223.1| General transcription factor 3C polypeptide [Medicago truncatula]
gi|355508278|gb|AES89420.1| General transcription factor 3C polypeptide [Medicago truncatula]
Length = 416
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 145/270 (53%), Gaps = 58/270 (21%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
E IN+G ++ +K + KRGR+KGSK +L +++MLG+A + YA G E AIS+L EVV
Sbjct: 138 EFINFGEGKRSRKKRSNKRGRQKGSKKELDEKISQMLGDAYIHYANGRHEMAISVLHEVV 197
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT----------- 110
RL PNLP++Y+TLGL H A+G+H++ FY+I AHL+PKD LWK L
Sbjct: 198 RLEPNLPDSYHTLGLVHGAIGDHENEMGFYMITAHLTPKDPTLWKTLYVWSMITSICCCD 257
Query: 111 -------------FAVQK--GDTAQAMYYIRQAI----RA----------EPKDIS---- 137
F +Q T +++ + Q+I RA E DI
Sbjct: 258 KTGSPTGASATTRFLIQSKCSSTERSLREVEQSITRNSRAFAGDSIFKCREQDDIGQASY 317
Query: 138 --------------LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
LR A FY E +Y+KAAE+YEQ+ +L D+VDA K A+ + KC
Sbjct: 318 CVSKAIKADPQDIFLRRSQAMFYAESQNYQKAAEAYEQVYQLCRDDVDALKAAAKFYDKC 377
Query: 184 GQTARSIGILEEYLKVHPSDADLSVIDLLV 213
GQ R I I+ +YLK P D SV+DLLV
Sbjct: 378 GQVERLICIIGDYLKSKPDRVDTSVVDLLV 407
>gi|413921075|gb|AFW61007.1| hypothetical protein ZEAMMB73_735189, partial [Zea mays]
Length = 290
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 109/151 (72%), Gaps = 4/151 (2%)
Query: 534 CLI-IDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHG 592
CL+ LC+ LA LQRY +A +IIN +++L + L +KKEELRSLGA++AY + DP+HG
Sbjct: 14 CLLSFQLCRTLALLQRYWDALQIINRTLKLGNDALTGDKKEELRSLGAQIAYRAPDPSHG 73
Query: 593 FDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISG 652
F +Y++Q HPYSL+AWN YYKV+SR I + H K++ R DCVPPIIISG
Sbjct: 74 FKYVRYVVQQHPYSLAAWNSYYKVVSR---IEDRFPHHFKYLLRTREANPDCVPPIIISG 130
Query: 653 HQFTMASHHQDAARCYLEAYKLLPENPLINL 683
H+FT S HQ AAR YLEAYKL PENPLINL
Sbjct: 131 HRFTAISQHQSAARDYLEAYKLDPENPLINL 161
>gi|290990245|ref|XP_002677747.1| transcription factor IIIC-gamma subunit [Naegleria gruberi]
gi|284091356|gb|EFC45003.1| transcription factor IIIC-gamma subunit [Naegleria gruberi]
Length = 1088
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 183/364 (50%), Gaps = 9/364 (2%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V +MLGEA+L++ NF +A+ +L EV+R+ PN+ + Y+TLGL + LG A DFY+I
Sbjct: 298 VKEMLGEANLEFIGANFSKAVQILLEVIRVCPNISDPYHTLGLIYEELGILDKATDFYLI 357
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A LSP + W +L + A Y +R+ +PK+ + RI ++ + +
Sbjct: 358 AGLLSPTNLEFWNRLSELCISTNKLQLAAYCLRRIYLIDPKNYNARIKQCELFMILNQPQ 417
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
+A Y+ + K FP +V + A+++ + + +I +L+E + DL+++++L
Sbjct: 418 RAINGYKSLLKQFPGDVPVVMSLAKIYYELNRVFDAIDVLQEAISRDEQRVDLTLVNMLA 477
Query: 214 AILMENNAYEKTLQHIEHAQIVRFSGKE-LPLKLKVKAGICYLRLGNM--EKAEILFADL 270
+ + YEK ++ IE + + E +P + K I LG + EK E +F D+
Sbjct: 478 ELFINEGWYEKAVKLIERISVQQNCPIEIMPPDISSKYAISQTYLGKLSNEKVESIFEDI 537
Query: 271 QWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKER 330
+ DL +A+ + AL Y L T+ + ++L++AECY SL E
Sbjct: 538 LKSPVAEFGDLFFSIAEMYYVVNEFRKALNVYSLLTTSEVYNKASIWLRIAECYKSLNEV 597
Query: 331 AHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS------PPKDLDSLDMNS 384
+I + L DN++AR+ L+ + + ++A+ +L KDL SL +
Sbjct: 598 DESIKYCEMVLHVIPDNVEARILLSEIYKDIGDIQKAVDVLEHSGSERAKKDLASLRKSF 657
Query: 385 DKSN 388
DKS+
Sbjct: 658 DKSS 661
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 534 CLIIDLCKALASLQRYEEASEIINL------SMRLAYNILPLE----KKEELRSLGAKMA 583
I+ LCK LA Q+ EE I+++ S R + E K++ LR L ++
Sbjct: 821 TFIVALCKVLAYCQQNEECLRILSVLLLNSRSTRKKFTFKSHEEKQRKRQHLRYLYVAVS 880
Query: 584 YDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKD 643
Y+S ++ + I+ PYS+ N + K+ +R+G I + H F+ L K+
Sbjct: 881 YNSGFYKRAYNAIRPIISDKPYSIPLLNLFNKITTRVGNILANHG----FMLRLLDKHPQ 936
Query: 644 CVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
VP +++ GH M+ H+ A Y AY+ +P P+I+L
Sbjct: 937 SVPLMLLVGHNCAMSGSHKLAIGEYFRAYRFMPNEPIISL 976
>gi|307111451|gb|EFN59685.1| hypothetical protein CHLNCDRAFT_133218 [Chlorella variabilis]
Length = 800
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 205/392 (52%), Gaps = 35/392 (8%)
Query: 60 VVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTA 119
++RL+PNLP+ Y+TLGL H A+G+ K + DFY+IAAHL+PKD +LW++L + +G
Sbjct: 139 IIRLAPNLPDPYHTLGLLHEAVGDVKKSLDFYMIAAHLTPKDISLWRRLAQLSADQGLVR 198
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
QA+Y Q +R + +D+ R A Y ++G+ KA E EQ++ PD+ +A K A+L
Sbjct: 199 QAIYCYTQVLRRDREDLDARYDRAMLYADMGENRKAIEGLEQVKAARPDHSEAPKALARL 258
Query: 180 FLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFS- 238
F + GQ R++ +L+ +L +P+ DL+ I++L + + + L ++ A+ +
Sbjct: 259 FHRTGQAPRAVQVLQAHLSTYPALTDLTHINILAELYCDAGQWAAALATVQRAERELLAP 318
Query: 239 GKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADL-ITEVADTLMSLGHSNS 297
+ELP+ L+VKAG LG++ A F+ + + ADL + E
Sbjct: 319 DEELPIDLRVKAGTAQAHLGDVAAAVEAFSLILQEPVESFADLALAE------------- 365
Query: 298 ALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF----EDNIDARLT 353
+ AGT + + +LA C+ +L + A+ + + + +I+A +
Sbjct: 366 --------QPEAGTPDA--WARLALCHRALNDVEGALNVYRAVVQQLGPDHPGHIEAVVA 415
Query: 354 LASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDF 413
LA L E +++EA ++L+ L++L D + +++ +I+ A G + +
Sbjct: 416 LADLHRELGQQQEAESVLA---GLEALIRTQDMPADHEAALEFVLRRANIFYACGKNDAY 472
Query: 414 VDAIFPLVCESLCV-EALRQKV--KVKRRLTK 442
++ P++ +L V EA ++V V RL K
Sbjct: 473 LNVTVPVLGATLRVLEAEHRQVAGDVDPRLAK 504
>gi|452819670|gb|EME26724.1| RNA polymerase III transcription factor TFIIIC-like protein
[Galdieria sulphuraria]
Length = 842
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 152/674 (22%), Positives = 301/674 (44%), Gaps = 45/674 (6%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
KK GR+ + + + + +GEA+L + G +EQAI +L+ +++ +P + Y+TL +
Sbjct: 81 KKGGRKSSTSSTVPKNLQSFMGEANLAFVEGRYEQAIEILEHIIKEAPKVAAPYHTLSVI 140
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PKDI 136
G + A DF +IAAHL+P+D +WKQL + + + A+Y + +A++A KD
Sbjct: 141 FENKGETQKALDFALIAAHLTPRDIDMWKQLAVKSQELKNLDLAIYCLSKAVKASGGKDE 200
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEY 196
A+ Y+ D+ +AA+ E++ +++P ++ AQ + +I +L+
Sbjct: 201 QALRARANLYIIKRDWRRAAQGLEKVARMYPKDIALALQVAQYYYDAEYPIHAIQVLQHT 260
Query: 197 LKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLR 256
L + + L + + +LME N YE+ + HA+ F +E+P L+V ICY+R
Sbjct: 261 LD-NVDEFSLELYQMQSRLLMEENEYERAAALLSHARFHFFLKEEMPFDLQVNYAICYIR 319
Query: 257 LGNMEKAEILFADLQWKNAIDHAD----LITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
LG AD + + H + + ++AD G+ A++ L T +
Sbjct: 320 LGQPH-----VADKIRRYLLQHLEQTPFYLKQLADAYTDSGYVEEAMEICRKLLTLNVEN 374
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
++L L C L+ A+ ++ K L + + ++A L ++ + + + ++A L+S
Sbjct: 375 EEEIFLNLGRCCKILQHFDEALGWYEKVLSKDPNRLEACLGMSYIYEQMGELDKAAELVS 434
Query: 373 PPKDLDSLDMNSDKSNPW-WLNEKI--IMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEA 429
+++ + + +E + I+ Y ++G DFV+AI PL+ E+
Sbjct: 435 KMQNISGKHRGERLEAIYTYASETVKSILDRAERYYSEGRLLDFVEAILPLL-EASADPR 493
Query: 430 LRQKVKVKRRLTKGI--LQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKE 487
+R +++ + + + L Q K + + ++ LL +++ K ++
Sbjct: 494 MRTRIQEETNTLQQVPLLGQGDKGKEEVTEPDEISN--HSSSSHFLLTFRKSKDKKERNW 551
Query: 488 ALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQ 547
KE + +A+ V + +L L+ +++ L
Sbjct: 552 EKKEIQFGVAEMGSV--------------------ISTILGESAFVHLLERCWRSMCELG 591
Query: 548 RYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSL 607
R EA ++ S+ + I ++ L AYD D ++ + + PYS+
Sbjct: 592 RNAEACRLVR-SLIQSGQIQNENDRKRLHIFAVAGAYDGKDYEGAYEGLRNLCLERPYSV 650
Query: 608 SAWNCYYKVLSRMGKINSKH-SKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAAR 666
S W +L R + SK +K KF L ++ +P I+++ H +M A
Sbjct: 651 SIW----ALLMRTSFLGSKEDTKTLKFAIRLLHRHPTSIPAILVTAHICSMRGSFGYALA 706
Query: 667 CYLEAYKLLPENPL 680
Y A+ LP++PL
Sbjct: 707 EYFRAFGHLPKHPL 720
>gi|303282853|ref|XP_003060718.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458189|gb|EEH55487.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1147
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 209/444 (47%), Gaps = 73/444 (16%)
Query: 10 RKKTRKLNKKRGRR-KGSKNKLSPG-VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNL 67
R+K + + R ++ + ++ +++ G + +G+A+L Y+ +F +AI LL+EV+RL PN
Sbjct: 222 RRKPGGVGRGRSKKPRKTRKRVAEGEAGRKMGDANLAYSTSDFPRAIELLQEVIRLLPNN 281
Query: 68 PETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQ 127
P+ Y TLG + GN + A DF +IAAHL PKD+A W +L + + + QA+Y + Q
Sbjct: 282 PDAYQTLGAIYEETGNERKALDFLMIAAHLEPKDAAQWYRLAEMSNAQKNPRQALYCLEQ 341
Query: 128 AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
A++A+P D + R A+ YVEIG+ +KA E + ++K DN D A+++ G
Sbjct: 342 ALKADPDDDNNRWDQANLYVEIGEPKKAIEHLDALRKKLRDNADVVVELARVYHSVGNAE 401
Query: 188 RSIGILEEYLKVHP-SDADLSVIDLLVAILME---------------------------- 218
R+ L++++++H + +++++L + ME
Sbjct: 402 RAETTLDDFMQMHGGAHVTPTLVNILAELKMEAGRFEETVTLIEASADRIKELAEEQRAS 461
Query: 219 NNAYEKTLQHIEHAQIVRFSG----------------------------KELPLKLKVKA 250
A E T E Q R G ++PL L V+
Sbjct: 462 ERAEEATAVAREVQQAARERGASENDAAQEAAAAAEEAIAAAVRAARIPADIPLDLTVRL 521
Query: 251 GICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSA-LKYYHFLETNA 309
G+ L L +A+ L+ + H DL + A+T + G + A + Y + ++
Sbjct: 522 GMALLYLDRAAEAKTHLQKLRNASVEGHEDLWMDAAETCWATGQTADAEVMYTALMRSSE 581
Query: 310 GTDNGYLYLKLAECYL---------SLKERAHAI---MFFYKA-LDRFEDNIDARLTLAS 356
D +++K+A+C + RA AI + FY+A L R D++ A+L LA
Sbjct: 582 LYDQPAIWVKVADCISRRILESSADATFTRAAAIDGAIEFYRAVLSRHPDSVQAKLPLAE 641
Query: 357 LLLEEAKEEEAITLLSPPKDLDSL 380
L + + EEAI +L +L L
Sbjct: 642 GLAKAGRTEEAIAVLPRASELGEL 665
>gi|255084906|ref|XP_002504884.1| predicted protein [Micromonas sp. RCC299]
gi|226520153|gb|ACO66142.1| predicted protein [Micromonas sp. RCC299]
Length = 1072
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 214/487 (43%), Gaps = 103/487 (21%)
Query: 30 LSPGVTKMLGEASLQY--AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+S K LGEA+L + G + +AI LL EV+RL PN P+ Y TLG +S L N K A
Sbjct: 224 ISAEAAKKLGEANLLFTQGEGQYTRAIELLTEVIRLIPNEPDAYATLGTIYSELKNDKKA 283
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
DF +I+AHL P + W L +++ + QA+Y + QA+R +P D R A YV
Sbjct: 284 LDFLMISAHLEPGNKEKWNNLAEMSIRLNNPRQALYCLGQALRLDPDDHDNRWDQARLYV 343
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+IG+ ++A E ++ +++ PDN + A++ + G + L+E + HP+ AD +
Sbjct: 344 DIGEPKRALEQFQNLRERIPDNPEVAVELAKMHYQMGNPDLAESTLDELMAAHPTRADAT 403
Query: 208 VIDLLVAILMENNAY-------EKTLQHI----------EH------------------- 231
++++L + M+ + E + +H+ EH
Sbjct: 404 LVNILAELKMDRREFNQTVSLIESSREHMRSLSARQREAEHAKMAGAAGAAAYNAAIDEG 463
Query: 232 -----------AQIVRFSGKE-------LPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
A+ KE +PL L + G+ L LG ++A ++ +
Sbjct: 464 TDRDAAFDRAKAETAAKLAKEREANPTDIPLDLTTRLGMSLLYLGRFDEAYAQLEKIKEE 523
Query: 274 NAIDHADLITEVADT---LMSLGHSNSALKYYHFLETNA-----------GTDNGYLYLK 319
+ + DL + A+T + +L + + H L T A D+ ++ K
Sbjct: 524 DVESYDDLYMDAAETCWAVANLADVSVSQIDSHRLVTQAEFMWTKLLDVQKYDDEPMWSK 583
Query: 320 LAECYLSLKER-----------------AHAIMFFYKA-LDRFEDNIDARLTLASLLLEE 361
+AEC ER A A++ FY+ L R D+I A++ LA L+
Sbjct: 584 IAECIRVRIERGDGSARTASAASLRSKAAEAVVKFYRTVLARHPDSIRAKIPLAEALIAA 643
Query: 362 AKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRA---KGMPEDFVDAIF 418
+EEA+ +L DLD LD + + +++ I+R G +DF+
Sbjct: 644 GGDEEAVEMLPAASDLDDLD------------KSVALRILDIHRQMGETGGDDDFLKYTL 691
Query: 419 PLVCESL 425
PL +SL
Sbjct: 692 PLARQSL 698
>gi|327280744|ref|XP_003225111.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Anolis carolinensis]
Length = 946
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 153/726 (21%), Positives = 311/726 (42%), Gaps = 119/726 (16%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 127 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAM 186
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ +P ++
Sbjct: 187 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNVKQAIFCYAKALKYDPTNV 246
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDNVDA----TKTGAQLFLKCGQTARSIG 191
+S Y ++G+++ A + Y +I L P + D + A+ + + +I
Sbjct: 247 RYLWERSSLYEQLGEHKLAMDGYRRILNLLTPQDGDRFMHLARDMAKSYYEANDITAAIE 306
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
I+EE H + + +++ + + N Y+K L A I FSG
Sbjct: 307 IMEEAFSKHQNLVSMEDVNIAAELYISNKQYDKAL-----AVITDFSGIVLEKNGAERNS 361
Query: 240 ---------------KELP--------------------------LKLKVKAGICYLRLG 258
+E+P + + VK +C + L
Sbjct: 362 PAEEDKEAMEKQEGQEEMPDPQEPVSGTSSASTEKVFCSIPDGVPIDITVKLMVCLVHLN 421
Query: 259 NMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYL 318
+E +L L +N D DL +VA+ + +G NSAL L + + ++L
Sbjct: 422 ILEPLNLLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSSLVCSERYNLAVVWL 481
Query: 319 KLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD 378
+ AEC +L A + K +D ++DAR++L++L + + E+A+ L P D D
Sbjct: 482 RHAECLKALGYIERAAESYAKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPD 541
Query: 379 SLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKR 438
+L +++ + K+++ + ++G +VD++ ++ A+ KV + R
Sbjct: 542 TLAQDANAAQQ---ELKLLLHRSTLLYSQGNMYGYVDSLLTML-------AMLLKVAMNR 591
Query: 439 RLTKGILQQRTKIYNNLPTDSILCGIRPA-APKSELLVAARARKKIQKKEALKEEKKALA 497
+ +C I + + + L + +R KI +E A
Sbjct: 592 --------------------AQVCLISSSKSGERHLYLIKVSRDKISDNND-QETTNCDA 630
Query: 498 KAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIIN 557
KA V L ++L ++ L++ AL L RY+EA +++
Sbjct: 631 KAIFV-------------------VLTSVLTKDDWWNLLLKAIYALCDLSRYKEAELLVD 671
Query: 558 LSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVL 617
S+ +K++EL G A + ++ + ++ H WN + ++
Sbjct: 672 SSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAYNYIRIMVMEHVDKPQLWNIFNQI- 730
Query: 618 SRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPE 677
++S+ +H +F L K D +++GH ++ + A Y++A++ PE
Sbjct: 731 ----TMHSQDVRHHRFCLRLMLKNPDNHALCVLNGHNAFVSGSFKHALGQYVQAFRTNPE 786
Query: 678 NPLINL 683
PL +L
Sbjct: 787 EPLYSL 792
>gi|432097585|gb|ELK27733.1| General transcription factor 3C polypeptide 3 [Myotis davidii]
Length = 927
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 146/707 (20%), Positives = 309/707 (43%), Gaps = 72/707 (10%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 138 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAM 197
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 198 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 257
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDNVDA----TKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L P + D + A+ + + +I
Sbjct: 258 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGDRFMQLARDMAKSYYEANDVTSAIN 317
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
+++E H + +++ + + N Y+K L+ I+ FSG
Sbjct: 318 VIQEAFSKHQGLVSMEDVNIGAELYISNKQYDKALE-----VIMDFSGIMLEKRATEEGT 372
Query: 240 ---------------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+ +P+ + VK +C + L +E L L +N D DL +
Sbjct: 373 SEENTAAENVTCTIPEGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 432
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G +SAL L + + ++L+ AEC +L A + K ++
Sbjct: 433 VAEAFLDVGEYSSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVELA 492
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIY 404
++DAR++L++L + + E A+ L P D D+L + +N K+++ +
Sbjct: 493 PLHLDARISLSTLQQQLGRPERALEALEPMYDPDTL---AQDANAAQQELKLLLHRSTLL 549
Query: 405 RAKGMPEDFVDAIFPLVCESLCVEALRQKV------KVKRRLTKGILQQRTKIYNNLPTD 458
++G ++D + ++ L V + +V K R I R KI +N +
Sbjct: 550 FSQGKMYGYMDTLLTMLAMLLKVAMNKAQVCLISSSKSGERHLYLIKVSRDKISDNNDQE 609
Query: 459 SILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAF 518
+ C + + S L L G+ T+
Sbjct: 610 TANCDTKDSHLTSVL-------------------DSTLVLPGGILTGMSSTEVAGLCRQV 650
Query: 519 RE--PPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELR 576
R L +++ EE L++ +L L R++EA +++ ++ + +K++EL
Sbjct: 651 RTIFAVLTSVMTKEEWWNLLLKAIFSLCELSRFQEAELLVDSALEYSAFYDDKQKRKELE 710
Query: 577 SLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRY 636
G A + ++ + ++ + WN + +V ++S+ +H +F
Sbjct: 711 YFGLSAAILDKNFRKAYNYIRIMVMENVSRPHLWNMFNQV-----TMHSQEVRHHRFCLR 765
Query: 637 LRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
L K+ + +++GH ++ + A Y++A++ P +PL ++
Sbjct: 766 LMLKHPENHALCVLNGHNAFVSGSFKHALGQYVQAFRTHPHDPLYSI 812
>gi|301625294|ref|XP_002941846.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Xenopus (Silurana) tropicalis]
gi|301625296|ref|XP_002941839.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Xenopus (Silurana) tropicalis]
Length = 880
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 203/421 (48%), Gaps = 25/421 (5%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
NKK R K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 131 NKKMMREKRPRSKLPKVLRGLMGEANIRFARGESEEAILMCMEIIRQAPLAYEPFSTLAM 190
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P ++ W +L ++++ + QA++ +A+R P ++
Sbjct: 191 IYEDQGDMEKSLQFELIAAHLNPSNTEEWVRLAEMSLEQDNIKQAIFCYGKALRYNPTNV 250
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y +IG+++ A + Y +I L + + A+ + + A +IG
Sbjct: 251 RFLWERSSLYEQIGEHKLAMDGYRRILNLLSPTDGERFMQLARDMAKTYYETNDIASAIG 310
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
+EE L H + + +++ + + N Y+K L I + S E
Sbjct: 311 TIEEALSKHQNLVAIEDVNIAAELYLSNKQYDKALDVITQFSGITLSKSETDVLNSAESV 370
Query: 242 -------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGH 294
+P+ + VK +C + L +E L L +N + DL +VA+ + +G
Sbjct: 371 VCHIPDGVPIDITVKMMLCLIHLNILEPVYPLLTFLMEQNPEEVGDLYLDVAEAFLDVGE 430
Query: 295 SNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTL 354
NSAL L + + ++L+ A+C +L A + K +D ++DAR++L
Sbjct: 431 YNSALPLLSALVCSLKYNLAVVWLRHADCLKALGHMEKAAESYSKVVDMAPLHLDARISL 490
Query: 355 ASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFV 414
++L + E+A+ L P D D+L + SN K+++ + ++G D+V
Sbjct: 491 STLQQQLGHPEKALEALEPMYDPDTL---AQDSNAAQQELKLLLHRSTLLFSQGKLYDYV 547
Query: 415 D 415
D
Sbjct: 548 D 548
>gi|156354428|ref|XP_001623396.1| predicted protein [Nematostella vectensis]
gi|156210091|gb|EDO31296.1| predicted protein [Nematostella vectensis]
Length = 753
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 151/697 (21%), Positives = 306/697 (43%), Gaps = 101/697 (14%)
Query: 22 RRKGSKNKLSPGVT-----KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
+RK SK + G + +GEA+L A GN+E+A + ++++ +P E + LG+
Sbjct: 2 KRKKSKGRPKRGTVPQKYRRQIGEANLCCAKGNYERAKEICIDIIKQAPKCAEPFQVLGM 61
Query: 77 AHSALGNHKSAFDFYVIAAHLS-PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKD 135
+ + + A F++I+A+L +DS W +L + ++++G+ QA+ QA++ P D
Sbjct: 62 VYEMQNDSEKALQFFLISAYLKKSEDSEDWLKLASMSLEQGNYKQALACYNQALKHNPDD 121
Query: 136 ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSI 190
++ A+ ++GD +KA E Y+ K FP++ +D A ++ + G +I
Sbjct: 122 PTILWERAAVCYQMGDVKKALEYYQVALKAFPNDDLEKLMDLAVEMATIYHEQGSLLDAI 181
Query: 191 GILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFS-GKE-------- 241
+E +D I++L + M Y K+L+ IV S G E
Sbjct: 182 VAMEAAFSRVQRCSDFRAINMLAELYMTAKQYSKSLKVHPTNNIVFLSLGDETSTKGTLD 241
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ L+VK +C + L ++ + + A L +++ D DL +VA+
Sbjct: 242 LNSKAKWIIPDKVPIDLRVKTVVCLIHLHCLQPVKDIIAPLYFESVDDVGDLYLDVAEAY 301
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ AL + L T + ++L A+ +SL A + + +++
Sbjct: 302 AENSNYEEALPIFDILVTTEKYNQAGVWLNKAQSLISLGRLEEAAAACTQVVSLAPSHLE 361
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGM 409
AR+ L+SLL + + ++AI +L+ + + + N + ++ +++ C + +++
Sbjct: 362 ARVQLSSLLQQLGRHDKAIEILTSKGNATLI----LECNLFEMDFRLLYHKCTLLKSQDR 417
Query: 410 PEDFVDA---IFPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRP 466
EDF++A +F + + + L + + T +++ R+ T LC I
Sbjct: 418 MEDFIEAAQQMFHVYFGDVSRKPLND--IIGKSHTIFLIEYRST------TLLSLCKIEN 469
Query: 467 AAPKSELLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNL 526
A +L+ + LA + EW+ + S+
Sbjct: 470 AIT------------------SLQYISQLLALISQWEWNFSLIIEMSK------------ 499
Query: 527 LKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDS 586
+N + L +D+C LAS Q +I+L ++ ++ELR + +
Sbjct: 500 -RNMHEEALFLDMC-GLASKQ-------LIDL----------IQPQKELRFMSIAALFLV 540
Query: 587 TDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVP 646
FD + ++ +P S WN +V+ +S+ S+H ++ + KY D +P
Sbjct: 541 GRSRKAFDFLRQVVAENPQSFLLWNMLGRVVG-----HSQDSRHHRYCLRMLIKYPDLLP 595
Query: 647 PIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
++++GH A + A Y+ A++ P +PLI+L
Sbjct: 596 LVVVNGHNSFTAGSFKFAIAEYIRAFRQCPSDPLISL 632
>gi|147841878|emb|CAN60432.1| hypothetical protein VITISV_020388 [Vitis vinifera]
Length = 137
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 99/151 (65%), Gaps = 33/151 (21%)
Query: 499 AAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINL 558
AAGV+W+SD++DDES LCKALASL++Y EA +IINL
Sbjct: 2 AAGVDWYSDESDDESP------------------------LCKALASLRKYWEALDIINL 37
Query: 559 SMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYK--- 615
++RLAYNI+P+EKKEELRSLGA++AY+ TDP HGFD KYI+Q HP+SL+AWNCYYK
Sbjct: 38 TLRLAYNIMPIEKKEELRSLGAQIAYNITDPKHGFDYVKYIVQQHPHSLAAWNCYYKSCL 97
Query: 616 -----VLSRMGKINSKHSKH-SKFIRYLRAK 640
+LS G N H H +K +LR++
Sbjct: 98 KLIPFLLSYGGNHNVPHCYHLTKMTAFLRSE 128
>gi|325179620|emb|CCA14018.1| transcription factor putative [Albugo laibachii Nc14]
Length = 936
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 181/359 (50%), Gaps = 23/359 (6%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSK---NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVR 62
+G R K + L +KR + S +KLSP ++ MLGEA++ YA ++QAI LLK+ ++
Sbjct: 88 WGNSRGKRKYLRRKRVSHRRSSVVPSKLSPELSAMLGEANMMYASHQYDQAIVLLKDFIK 147
Query: 63 LSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAM 122
+P +P+ Y+TLG+ + N A F++IA L+P D+ LWK + A ++ + QA+
Sbjct: 148 KAPTIPDPYHTLGMIYEDRKNKSKALQFFLIACTLTPGDAELWKHVGRIAKEENNMQQAI 207
Query: 123 YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK 182
+ R A +A+PKD E GD A +Y+++ L+P+++ A+ +
Sbjct: 208 FCFRSACKADPKDKDAVYSYIEICQEQGDERSLAPAYKKLALLYPNDLSMWMQVAEAYHA 267
Query: 183 CGQTARSIGILEEYLKVHPSDADLS--------VIDLLVAILMENNAYEKTLQHIE--HA 232
G+ +I L+ + +D+ ++ +++L + + Y+ + I+ HA
Sbjct: 268 AGKNDEAIEALQTCITKACADSAIADAQQVESNAVNMLADLYITLKKYQDAIHLIKDFHA 327
Query: 233 QIVRFSGK---------ELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLIT 283
+ S + +LPL + +K GIC+L + +E AE + L ++ + DL
Sbjct: 328 RNSAKSSQTDQDFLQSLDLPLDIVIKYGICHLFINEIETAESVITRLYSQDVETYMDLFV 387
Query: 284 EVADTLMSL-GHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
+VAD +++ H A++ L + ++++ AEC+ L A+ +F KA+
Sbjct: 388 DVADAYIAISAHDVEAIQTLKLLLPHEKLLKDDIFVRYAECHARLGMTNIALEYFEKAI 446
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Query: 527 LKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDS 586
L E L+I++ KAL +++ A E++ + + + ++ ELR L +A +
Sbjct: 656 LGEESFYALVIEVAKALTECEKHTAAIELLT-DVNASDKVYQSNRRFELRFLALVIALEF 714
Query: 587 TDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVP 646
+ ++CA+ + + + WN + +V++ I +S H KF+ + P
Sbjct: 715 GENRMAYECARLNILEDFKNPAYWNLFARVIT----ITGAYSFHQKFLAKVLKHDPTNYP 770
Query: 647 PIIISGHQFTMASHHQDAARCYLEAYKLLPENPLI 681
I+++GHQ + A L AY+ E+PL+
Sbjct: 771 CIVLAGHQSSYWDISLMAGEFTL-AYQQDKEDPLV 804
>gi|297471850|ref|XP_002685517.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
polypeptide 3 [Bos taurus]
gi|296490454|tpg|DAA32567.1| TPA: general transcription factor IIIC, polypeptide 3, 102kDa [Bos
taurus]
Length = 885
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 193/401 (48%), Gaps = 37/401 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 131 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 190
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 191 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 250
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + T+ A+ + + +I
Sbjct: 251 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAIS 310
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL--------- 242
I+EE L H + +++ + + N Y++ L+ I FSG L
Sbjct: 311 IIEEALSKHQGLVSMEDVNIAAELYISNKQYDRALE-----VITDFSGIVLEKRTTEEGT 365
Query: 243 ------------------PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
P+ + VK +C + L +E L L +N D DL +
Sbjct: 366 SEENKGGDNVICAIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 425
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 426 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLA 485
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
++DAR++L++L + + E+A+ L P D D+L +++
Sbjct: 486 PLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDAN 526
>gi|350593744|ref|XP_001925881.3| PREDICTED: general transcription factor 3C polypeptide 3 isoform 1
[Sus scrofa]
Length = 884
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 199/397 (50%), Gaps = 26/397 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 131 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 190
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 191 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 250
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDNVD----ATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L P + D + A+ + + +I
Sbjct: 251 RYLWERSSLYEQMGDHKMAMDGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAIN 310
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-EHAQIV--RFSGKE------- 241
++EE HP + +++ + + N Y+K L+ I + + IV + S +E
Sbjct: 311 VIEEAFSKHPGLVSMEDVNIAGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTA 370
Query: 242 -----------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLM 290
+P+ + VK +C + L +E L L +N D DL +VA+ +
Sbjct: 371 DDNVTCIVPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFL 430
Query: 291 SLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
+G NSAL L + + ++L+ AEC +L A + K +D ++DA
Sbjct: 431 DVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDA 490
Query: 351 RLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
R++L++L + + E+A+ L P D D+L +++ +
Sbjct: 491 RISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 527
>gi|74005034|ref|XP_536013.2| PREDICTED: general transcription factor 3C polypeptide 3 isoform 1
[Canis lupus familiaris]
Length = 883
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 194/397 (48%), Gaps = 26/397 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPS--------------------DADLSVIDLLVAILMENNAYEKTLQHIEH 231
I+EE H D L VI I++E NA E T + +
Sbjct: 310 IIEEAFSKHQGLVSMEDVNIAAELYISNKHYDKALEVITDFSGIVLEKNAEEGTSEENKA 369
Query: 232 AQIVRFSGKE-LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLM 290
+ V S + +P+ + VK +C + L +E L L +N D DL +VA+ +
Sbjct: 370 GENVTCSIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFL 429
Query: 291 SLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
+G NSAL L + + ++L+ AEC +L A + K +D ++DA
Sbjct: 430 DVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDA 489
Query: 351 RLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
R++L++L + + E+A+ L P D D+L +++ +
Sbjct: 490 RISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 526
>gi|297465181|ref|XP_002703724.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
polypeptide 3 [Bos taurus]
Length = 885
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 194/403 (48%), Gaps = 37/403 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 131 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 190
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 191 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 250
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + T+ A+ + + +I
Sbjct: 251 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAIS 310
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL--------- 242
I+EE L H + +++ + + N Y++ L+ I FSG L
Sbjct: 311 IIEEALSKHQGLVSMEDVNIAAELYISNKQYDRALE-----VITDFSGIVLEKRTTEEGT 365
Query: 243 ------------------PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
P+ + VK +C + L +E L L +N D DL +
Sbjct: 366 SEENKGGDNVICAIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 425
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 426 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLA 485
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 486 PLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 528
>gi|426221270|ref|XP_004004833.1| PREDICTED: general transcription factor 3C polypeptide 3 isoform 1
[Ovis aries]
gi|426221272|ref|XP_004004834.1| PREDICTED: general transcription factor 3C polypeptide 3 isoform 2
[Ovis aries]
Length = 885
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 194/403 (48%), Gaps = 37/403 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 131 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 190
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 191 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 250
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + T+ A+ + + +I
Sbjct: 251 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAIN 310
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL--------- 242
I+EE L H + +++ + + N Y++ L+ I FSG L
Sbjct: 311 IIEEALSKHQGLVSMEDVNIAAELYISNKQYDRALE-----VITDFSGIVLEKRTTDEGT 365
Query: 243 ------------------PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
P+ + VK +C + L +E L L +N D DL +
Sbjct: 366 SEENKAGDNVICAIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 425
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 426 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLA 485
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 486 PLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 528
>gi|440906973|gb|ELR57176.1| General transcription factor 3C polypeptide 3 [Bos grunniens mutus]
Length = 885
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 193/401 (48%), Gaps = 37/401 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 131 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 190
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 191 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 250
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + T+ A+ + + +I
Sbjct: 251 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAIN 310
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL--------- 242
I+EE L H + +++ + + N Y++ L+ I FSG L
Sbjct: 311 IIEEALSKHQGLVSMEDVNIAAELYISNKQYDRALE-----VITDFSGIVLEKRTTEEGT 365
Query: 243 ------------------PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
P+ + VK +C + L +E L L +N D DL +
Sbjct: 366 SEENKGGDNVICAIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 425
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 426 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLA 485
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
++DAR++L++L + + E+A+ L P D D+L +++
Sbjct: 486 PLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDAN 526
>gi|149730817|ref|XP_001502557.1| PREDICTED: general transcription factor 3C polypeptide 3 [Equus
caballus]
Length = 887
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 192/398 (48%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 133 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 192
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 193 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 252
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + T+ A+ + + +I
Sbjct: 253 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAIN 312
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I+EE H + +++ + + N Y+K L+ I + K
Sbjct: 313 IIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIVLEKKTAEEDTPEENK 372
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E + L L +N D DL +VA+
Sbjct: 373 ASESVTCTIPDGVPIDITVKLMVCLVHLNILEPLDPLLTTLVEQNPEDMGDLYLDVAEAF 432
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 433 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 492
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + E+A+ L P D D+L +++ +
Sbjct: 493 ARISLSTLQQQLGHPEKALEALEPMYDPDTLAQDANAA 530
>gi|395846889|ref|XP_003796122.1| PREDICTED: general transcription factor 3C polypeptide 3 [Otolemur
garnettii]
Length = 883
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 193/398 (48%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 129 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 188
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 189 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 248
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + T+ A+ + + +I
Sbjct: 249 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAIN 308
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE--------------------- 230
I++E H + + +++ + + N Y+K L+ I
Sbjct: 309 IIDEAFSKHQNLVSMEDVNIAAELCISNKQYDKALEVITDFSGIVLEKKTSIEGTSEENK 368
Query: 231 -HAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
H + +P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 369 AHEDVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 428
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 429 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 488
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 489 ARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 526
>gi|148667591|gb|EDL00008.1| mCG113059 [Mus musculus]
Length = 897
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 193/403 (47%), Gaps = 37/403 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 143 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAM 202
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 203 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 262
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +A +I
Sbjct: 263 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDSASAIN 322
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
I+EE H + +++ + + N Y+K L+ I FSG
Sbjct: 323 IIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALE-----VITDFSGIILEKETLEEGT 377
Query: 240 ---------------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+P+ + VK +C + L +E L L +N D DL +
Sbjct: 378 SEENKAAETVTCSIPDSVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 437
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 438 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLA 497
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L+ L + + E+A+ L P D D+L +++ +
Sbjct: 498 PLHLDARISLSILQQQLGRPEKALEALEPMYDPDTLAQDANAA 540
>gi|354506205|ref|XP_003515155.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Cricetulus griseus]
gi|344258627|gb|EGW14731.1| General transcription factor 3C polypeptide 3 [Cricetulus griseus]
Length = 883
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 192/401 (47%), Gaps = 37/401 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 129 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAM 188
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 189 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 248
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +A +I
Sbjct: 249 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDSASAIN 308
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
I+EE H + +++ + + N Y+K L+ I FSG
Sbjct: 309 IIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALE-----VITDFSGIILEKETLEEGT 363
Query: 240 ---------------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+P+ + VK +C + L +E L L +N D DL +
Sbjct: 364 SEENKAAETVTCSIPDSVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 423
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 424 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLA 483
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
++DAR++L+ L + + E+A+ L P D D+L +++
Sbjct: 484 PLHLDARISLSILQQQLGRPEKALEALEPMYDPDTLAQDAN 524
>gi|75677510|ref|NP_001028366.1| general transcription factor 3C polypeptide 3 [Mus musculus]
gi|74138986|dbj|BAE38400.1| unnamed protein product [Mus musculus]
gi|223461537|gb|AAI41158.1| General transcription factor IIIC, polypeptide 3 [Mus musculus]
Length = 882
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 193/403 (47%), Gaps = 37/403 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 128 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAM 187
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 188 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 247
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +A +I
Sbjct: 248 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDSASAIN 307
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
I+EE H + +++ + + N Y+K L+ I FSG
Sbjct: 308 IIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALE-----VITDFSGIILEKETLEEGT 362
Query: 240 ---------------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+P+ + VK +C + L +E L L +N D DL +
Sbjct: 363 SEENKAAETVTCSIPDSVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 422
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 423 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLA 482
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L+ L + + E+A+ L P D D+L +++ +
Sbjct: 483 PLHLDARISLSILQQQLGRPEKALEALEPMYDPDTLAQDANAA 525
>gi|410969111|ref|XP_003991040.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
polypeptide 3 [Felis catus]
Length = 884
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 193/403 (47%), Gaps = 37/403 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + T+ A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL--------- 242
I+EE H + +++ + + N Y++ L+ I FSG L
Sbjct: 310 IIEEAFSKHQGLVSMEDVNVAAELYISNKQYDRALE-----VITDFSGIVLEKXTTEEGT 364
Query: 243 ------------------PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
P+ + VK +C + L +E L L +N D DL +
Sbjct: 365 SEENKAGENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 424
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 425 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLA 484
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 485 PLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 527
>gi|301769317|ref|XP_002920075.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Ailuropoda melanoleuca]
Length = 883
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 194/397 (48%), Gaps = 26/397 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-EHAQIVRFSGKE--------- 241
I+EE H + +++ + + N Y+K L+ I + + IV E
Sbjct: 310 IIEEAFSKHQGLVSMEDVNIAAELYISNKHYDKALEVITDFSGIVLEKNTEEGTSEENKA 369
Query: 242 -----------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLM 290
+P+ + VK +C + L +E L L +N D DL +VA+ +
Sbjct: 370 GENVTCTIPDGVPIDITVKLMVCLVHLSILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFL 429
Query: 291 SLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
+G NSAL L + + ++L+ AEC +L A + K +D ++DA
Sbjct: 430 DVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDA 489
Query: 351 RLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
R++L++L + + E+A+ L P D D+L +++ +
Sbjct: 490 RISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 526
>gi|351698656|gb|EHB01575.1| General transcription factor 3C polypeptide 3 [Heterocephalus
glaber]
Length = 889
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 196/404 (48%), Gaps = 38/404 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 134 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGKREEAILMCMEIIRQAPLAYEPFSTLAM 193
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP +I
Sbjct: 194 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNI 253
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S ++GD++ A + Y +I L P + + + A+ + + +A +I
Sbjct: 254 RFLWERSSLCEQMGDHKMAMDGYRRILNLLPASDGERFMQLARDMAKSYYEASDSASAIN 313
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
I+EE H + + +++ + + N Y++ L+ I FSG
Sbjct: 314 IIEEAFSKHQALVSMEDVNIAAELYISNKQYDRALE-----VITDFSGIVLEKQTLEEDG 368
Query: 240 ----------------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLIT 283
+ +P+ + VK +C + L +E L L +N D DL
Sbjct: 369 PSEENKACDGITCAVPEGVPIDIMVKLMVCLVHLHILEPLNPLLTTLVEQNPEDMGDLYL 428
Query: 284 EVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
+VA+ L+ +G +SAL L + ++L+ AEC +L A + K +D
Sbjct: 429 DVAEALLDIGEYSSALPLLSALVCSERYSLAVVWLRHAECLKALGYMERAAESYSKVVDL 488
Query: 344 FEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 489 APLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 532
>gi|281353838|gb|EFB29422.1| hypothetical protein PANDA_008759 [Ailuropoda melanoleuca]
Length = 852
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 194/397 (48%), Gaps = 26/397 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 99 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 158
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 159 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 218
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 219 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 278
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-EHAQIVRFSGKE--------- 241
I+EE H + +++ + + N Y+K L+ I + + IV E
Sbjct: 279 IIEEAFSKHQGLVSMEDVNIAAELYISNKHYDKALEVITDFSGIVLEKNTEEGTSEENKA 338
Query: 242 -----------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLM 290
+P+ + VK +C + L +E L L +N D DL +VA+ +
Sbjct: 339 GENVTCTIPDGVPIDITVKLMVCLVHLSILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFL 398
Query: 291 SLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
+G NSAL L + + ++L+ AEC +L A + K +D ++DA
Sbjct: 399 DVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDA 458
Query: 351 RLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
R++L++L + + E+A+ L P D D+L +++ +
Sbjct: 459 RISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 495
>gi|417405106|gb|JAA49278.1| Putative rna polymerase iii transcription factor tfiiic [Desmodus
rotundus]
Length = 884
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 193/403 (47%), Gaps = 37/403 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSLSDGERFMQLARDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
I+EE H + +++ + + N Y+K L+ I FSG
Sbjct: 310 IIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALE-----VITDFSGIVLEKKTTEEGT 364
Query: 240 ---------------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+ +P+ + VK +C + L +E L L +N D DL +
Sbjct: 365 SQENKAGENVTCTIPEGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 424
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 425 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLA 484
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 485 PFHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 527
>gi|431895013|gb|ELK04806.1| General transcription factor 3C polypeptide 3 [Pteropus alecto]
Length = 884
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 190/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I+EE H + +++ + + N Y+K L+ I V K
Sbjct: 310 IIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGVVLEKKTTEEGSLEENK 369
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L E L L +N D DL +VA+
Sbjct: 370 VGENVTCTIPDGVPIDITVKLMVCLVHLNIFEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 429
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 430 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 489
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 490 ARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 527
>gi|157817905|ref|NP_001101709.1| general transcription factor 3C polypeptide 3 [Rattus norvegicus]
gi|149046170|gb|EDL99063.1| general transcription factor IIIC, polypeptide 3, 102kDa
(predicted) [Rattus norvegicus]
Length = 883
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 192/403 (47%), Gaps = 37/403 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 129 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAM 188
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 189 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 248
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + + +I
Sbjct: 249 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDSTSAIN 308
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
I+EE H + +++ + + N Y+K L+ I FSG
Sbjct: 309 IIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALE-----VITDFSGIILEKETLEEGT 363
Query: 240 ---------------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+P+ + VK +C + L +E L L +N D DL +
Sbjct: 364 SEENKAAETVTCSIPDSVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 423
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 424 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLA 483
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L+ L + + E+A+ L P D D+L +++ +
Sbjct: 484 PLHLDARISLSILQQQLGRPEKALEALEPMYDPDTLAQDANAA 526
>gi|66816555|ref|XP_642287.1| transcription factor IIIC-gamma subunit [Dictyostelium discoideum
AX4]
gi|60470353|gb|EAL68333.1| transcription factor IIIC-gamma subunit [Dictyostelium discoideum
AX4]
Length = 997
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 160/671 (23%), Positives = 289/671 (43%), Gaps = 42/671 (6%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V K+L + QY GNF+ A S EVVR+ P L YN LG + G ++A FYV
Sbjct: 231 VRKLLVGGNEQYTKGNFDLAFSTYAEVVRMLPRLSIPYNILGKIKESQGEMEAALGFYVY 290
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A + + W + A + G A+Y +A R + D+ + ++ G Y+
Sbjct: 291 GAQMQGSNGD-WSSIGVRAKEAGQMETALYCFSRACRNDETDLDSFWEKSLILIQKGFYK 349
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ----TARSIGILEEYLKVHPS--DADLS 207
+A + ++ K + + A+++ Q +A +++E L + S D L
Sbjct: 350 RALKILTKLSKYTNGSPQVLQELARVYSHLSQYHDASAMISEVVDEQLLSNKSLDDVSLD 409
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRL----GNMEKA 263
++L++ + + Y+ T+ + E+P L A Y L GN +
Sbjct: 410 SVNLMMELKNKTRNYQDTITIFNKITAKYGNDSEVPFDLVFNACQAYYSLGTDFGNERGS 469
Query: 264 EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAE 322
++L L + ++ DL T +AD L +LG AL Y H +T+ + ++K+A+
Sbjct: 470 KLLHLRLLPLDPSEYGDLFTSLADELFALGKYQDALVVYLHLKDTDFDIPSN--WVKIAD 527
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDM 382
+ S K AI +F KA +R N+ L ++ + E +E+A+ +L+ + + +
Sbjct: 528 IHRSTKNYEVAIEYFSKANERVPGNVHTTLAMSEIYKEMGDDEKALQILNQSSTISNRND 587
Query: 383 NSDK----SNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKR 438
S+K S LN K L I + A + ++ V
Sbjct: 588 QSEKELFESTLNELNSKRNAYLNSI-KNNSSTAAAAAAAAGGATNTTSTSGAKESNPVGL 646
Query: 439 RLTK---GILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKA 495
+TK + + + + NL S GI A LL + R ++K + + KK
Sbjct: 647 DVTKEDVKLFYRHAQAFLNLSKYSQYLGIATA-----LLHGSTDRYIYRRKVGVGKFKKR 701
Query: 496 LAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEI 555
+S + + + E LL E+ L++D K L R +EAS+
Sbjct: 702 KRVKRSKNPYSIEMYKHQSEHPYAE-----LLDEEDYFNLLLDSSKIFVHLNRQQEASQY 756
Query: 556 INLSMRLAYNILPLEK---KEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNC 612
+ ++R NI E +L+ L +A++ + + KY+ PYS WN
Sbjct: 757 LRYALR---NI-HFENGLFSHQLKFLTVAVAFNDKNYYLAYKHVKYVCSKKPYSNRVWNL 812
Query: 613 YYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAY 672
+ K++ G ++ + ++F+ + KY D +P +I+ G+Q + + A Y++AY
Sbjct: 813 FNKIIVNYG---NRSTVQNRFLTKINEKYSDSIPVLIMLGNQNKQTDNARGALFEYIKAY 869
Query: 673 KLLPENPLINL 683
+L P++PLINL
Sbjct: 870 RLCPDDPLINL 880
>gi|355693936|gb|AER99501.1| proteinral transcription factor IIIC, polypeptide 3, 102kDa
[Mustela putorius furo]
Length = 883
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 194/397 (48%), Gaps = 26/397 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 133 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 192
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 193 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 252
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 253 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 312
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-EHAQIVRFSGKE--------- 241
I+EE H + I++ + + N Y+K L+ I + + IV E
Sbjct: 313 IIEEAFSKHQGLVSMEDINIAAELYISNKHYDKALEVITDFSGIVLEKNTEEGPSEENKA 372
Query: 242 -----------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLM 290
+P+ + VK +C + L +E L L +N D DL +VA+ +
Sbjct: 373 GENVSCSIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFL 432
Query: 291 SLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
+G +SAL L + + ++L+ AEC +L A + K +D ++DA
Sbjct: 433 DVGEYSSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDA 492
Query: 351 RLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
R++L++L + + E+A+ L P D D+L +++ +
Sbjct: 493 RISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 529
>gi|197102596|ref|NP_001127553.1| general transcription factor 3C polypeptide 3 [Pongo abelii]
gi|55731489|emb|CAH92456.1| hypothetical protein [Pongo abelii]
Length = 885
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 192/396 (48%), Gaps = 27/396 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 131 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 190
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 191 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 250
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 251 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 310
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-------------EHAQIVRFS 238
I++E H + +++ + + N Y+K L+ I E
Sbjct: 311 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIVLEKKTSEEGTSEENK 370
Query: 239 GKE---------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
G E +P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 371 GPENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 430
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 431 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 490
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
AR++L++L + + E+A+ L P D D+L ++++
Sbjct: 491 ARISLSTLQQQLGQPEKALEALEPMYDPDTLALDAN 526
>gi|242080879|ref|XP_002445208.1| hypothetical protein SORBIDRAFT_07g005940 [Sorghum bicolor]
gi|241941558|gb|EES14703.1| hypothetical protein SORBIDRAFT_07g005940 [Sorghum bicolor]
Length = 188
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
+RA+P+D+ L+ Y + DY+KAAE YEQI +++P N+ K AQ++ +CGQ +
Sbjct: 1 MRADPEDVDLKYLCGDMYRNLCDYQKAAEIYEQIVRIYPANIAVRKVAAQMYRECGQIDK 60
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKV 248
+I +LE+Y S+ D SV+DLL+++ + NN + L+ I+ AQ+ S ++LP++L+
Sbjct: 61 AINLLEDYANTQTSNIDWSVLDLLISLYLRNNVLSEALRQIKRAQLQLGSQEKLPVQLQA 120
Query: 249 KAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETN 308
K IC+ G+M+ AEI D+ + + ++ D+I E+A TL +G A+K+Y +E N
Sbjct: 121 KEIICHAYCGDMKHAEIFLRDVHLEPSKENIDVIKELASTLEKMGQYEYAVKFYLLIE-N 179
Query: 309 AGTDN 313
T N
Sbjct: 180 VATHN 184
>gi|426338119|ref|XP_004033038.1| PREDICTED: general transcription factor 3C polypeptide 3 [Gorilla
gorilla gorilla]
Length = 799
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 191/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 45 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 104
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 105 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 164
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 165 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 224
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 225 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENK 284
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 285 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 344
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 345 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 404
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 405 ARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAA 442
>gi|62319957|dbj|BAD94055.1| hypothetical protein [Arabidopsis thaliana]
Length = 394
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 132/236 (55%), Gaps = 1/236 (0%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-N 83
GSK +++P + K EA +A+G +A+ +L EV++ +P Y L LG
Sbjct: 143 GSKKEVAPDILKRFREALFLHAHGRDIEALPILVEVIKQAPAFDIAYYYLSRVSEQLGKT 202
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
S+ + IAA++ S WK L ++ + + A Y +AI+A+P DI L+ A
Sbjct: 203 ESSSTEALKIAANIKGSKSPFWKLLYERFKEQENISVARSYASKAIQADPDDIPLKYEYA 262
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ G Y +AAE++EQI + P+ ++A K G Q FLK G+ R+ ILE+++K H S+
Sbjct: 263 DICLNTGKYREAAETFEQIFRRCPERIEALKWGVQYFLKSGEGERAASILEDHIKSHSSE 322
Query: 204 ADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGN 259
V+DLL ++ M+ NA+++ L++I + + GKEL LK++ IC++ L N
Sbjct: 323 VGHDVLDLLASVFMKINAHDRALKYIHDVRQIYNVGKELSSSLKIRQAICHVHLEN 378
>gi|355565060|gb|EHH21549.1| hypothetical protein EGK_04646 [Macaca mulatta]
gi|355750715|gb|EHH55042.1| hypothetical protein EGM_04172 [Macaca fascicularis]
Length = 906
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 191/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 152 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 211
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 212 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 271
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 272 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 331
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 332 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIVLEKKTSEDGTSEENK 391
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 392 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 451
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 452 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 511
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 512 ARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 549
>gi|402888964|ref|XP_003907806.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
polypeptide 3 [Papio anubis]
Length = 884
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 191/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 310 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIVLEKKTSEEGTSEENK 369
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 370 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 429
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 430 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 489
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 490 ARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 527
>gi|383873368|ref|NP_001244493.1| general transcription factor 3C polypeptide 3 [Macaca mulatta]
gi|380818016|gb|AFE80882.1| general transcription factor 3C polypeptide 3 isoform 1 [Macaca
mulatta]
gi|383422917|gb|AFH34672.1| general transcription factor 3C polypeptide 3 isoform 1 [Macaca
mulatta]
Length = 884
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 191/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 310 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIVLEKKTSEDGTSEENK 369
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 370 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 429
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 430 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 489
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 490 ARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 527
>gi|441669396|ref|XP_003254135.2| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
polypeptide 3 [Nomascus leucogenys]
Length = 889
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 191/401 (47%), Gaps = 30/401 (7%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 132 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 191
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP +
Sbjct: 192 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKXEPNMV 251
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKL-FPDN-------VDATKTGAQLFLKCGQTAR 188
+S Y ++GD++ + Y +I L FP + ++ K + + +
Sbjct: 252 RYLWEGSSLYEQMGDHKMTMDGYRRILNLCFPSDGERFMQLLEICKVSLESYYEANDVTS 311
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE------- 241
+I I++E H + +++ + + N Y+K L+ I + K
Sbjct: 312 AINIIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIALEKKTSEEGTSE 371
Query: 242 ---------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVA 286
+P+ + VK +C + L +E L L +N D DL +VA
Sbjct: 372 ENKAPENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVA 431
Query: 287 DTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 432 EAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPL 491
Query: 347 NIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
++DAR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 492 HLDARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAA 532
>gi|28175202|gb|AAH43347.1| General transcription factor IIIC, polypeptide 3, 102kDa [Homo
sapiens]
Length = 886
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 191/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 132 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 191
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 192 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 251
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 252 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 311
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 312 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENK 371
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 372 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 431
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 432 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 491
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 492 ARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAA 529
>gi|6912398|ref|NP_036218.1| general transcription factor 3C polypeptide 3 isoform 1 [Homo
sapiens]
gi|47606223|sp|Q9Y5Q9.1|TF3C3_HUMAN RecName: Full=General transcription factor 3C polypeptide 3;
AltName: Full=Transcription factor IIIC 102 kDa subunit;
Short=TFIIIC 102 kDa subunit; Short=TFIIIC102; AltName:
Full=Transcription factor IIIC subunit gamma;
Short=TF3C-gamma
gi|5281314|gb|AAD41475.1|AF133123_1 transcription factor IIIC102 [Homo sapiens]
gi|62630107|gb|AAX88853.1| unknown [Homo sapiens]
gi|119590538|gb|EAW70132.1| general transcription factor IIIC, polypeptide 3, 102kDa, isoform
CRA_a [Homo sapiens]
gi|189054489|dbj|BAG37262.1| unnamed protein product [Homo sapiens]
Length = 886
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 191/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 132 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 191
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 192 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 251
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 252 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 311
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 312 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENK 371
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 372 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 431
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 432 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 491
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 492 ARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAA 529
>gi|410209466|gb|JAA01952.1| general transcription factor IIIC, polypeptide 3, 102kDa [Pan
troglodytes]
gi|410251118|gb|JAA13526.1| general transcription factor IIIC, polypeptide 3, 102kDa [Pan
troglodytes]
gi|410307060|gb|JAA32130.1| general transcription factor IIIC, polypeptide 3, 102kDa [Pan
troglodytes]
gi|410332461|gb|JAA35177.1| general transcription factor IIIC, polypeptide 3, 102kDa [Pan
troglodytes]
Length = 887
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 191/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 133 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 192
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 193 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 252
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 253 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 312
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 313 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENK 372
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 373 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 432
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 433 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 492
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 493 ARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAA 530
>gi|332815031|ref|XP_003309425.1| PREDICTED: general transcription factor 3C polypeptide 3 [Pan
troglodytes]
gi|410209468|gb|JAA01953.1| general transcription factor IIIC, polypeptide 3, 102kDa [Pan
troglodytes]
gi|410251120|gb|JAA13527.1| general transcription factor IIIC, polypeptide 3, 102kDa [Pan
troglodytes]
gi|410307062|gb|JAA32131.1| general transcription factor IIIC, polypeptide 3, 102kDa [Pan
troglodytes]
gi|410332463|gb|JAA35178.1| general transcription factor IIIC, polypeptide 3, 102kDa [Pan
troglodytes]
Length = 886
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 191/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 132 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 191
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 192 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 251
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 252 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 311
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 312 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENK 371
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 372 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 431
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 432 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 491
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 492 ARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAA 529
>gi|344268722|ref|XP_003406205.1| PREDICTED: general transcription factor 3C polypeptide 3 [Loxodonta
africana]
Length = 883
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 192/401 (47%), Gaps = 37/401 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 129 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 188
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 189 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 248
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQI-QKLFPDN----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L P + + + A+ + + +I
Sbjct: 249 RYLWERSSLYEQMGDHKMAMDGYRRILNYLTPSDGERFMQLARDMAKSYYEANDVTSAIN 308
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL--------- 242
I+EE H + +++ + + N Y++ L+ I FSG L
Sbjct: 309 IIEEAFSKHQGLVSMEDVNIAAELFISNKQYDRALE-----VITGFSGIVLEKRTTEEGT 363
Query: 243 ------------------PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
P+ + VK +C + L +E L L +N D DL +
Sbjct: 364 LEENKAGESVSCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 423
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 424 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLA 483
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
++DAR++L++L + + E+A+ L P D D+L +++
Sbjct: 484 PLHLDARISLSTLQQQLDRPEKALEALEPMYDPDTLAQDAN 524
>gi|397509898|ref|XP_003825348.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
polypeptide 3 [Pan paniscus]
Length = 887
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 190/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 133 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 192
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA + +A++ EP ++
Sbjct: 193 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAXFCYTKALKYEPTNV 252
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 253 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 312
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 313 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENK 372
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 373 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 432
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 433 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 492
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 493 ARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAA 530
>gi|444516132|gb|ELV11065.1| General transcription factor 3C polypeptide 3 [Tupaia chinensis]
Length = 732
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 183/375 (48%), Gaps = 25/375 (6%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+GEA++++A G E+AI + E++R +P E ++TL + + G+ + + F +IAAHL
Sbjct: 1 MGEANIRFARGEREEAILMCMEIIRQAPLAHEPFSTLAMIYEDQGDMEKSLQFELIAAHL 60
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P D+ W +L +++ + QA++ +AI+ EP +I +S Y ++GD++ A +
Sbjct: 61 NPSDTEEWVRLAEMSLEHDNIKQAIFCYTKAIKYEPTNIRFLWERSSLYEQMGDHKMAMD 120
Query: 158 SYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLL 212
Y +I L + + A+ + + +I I+EE H + I++
Sbjct: 121 GYRRILNLLSPTDGERFMQLARDIAKSYYEANDVTSAINIIEEAFSKHQDLVSMEDINIA 180
Query: 213 VAILMENNAYEKTLQHI-EHAQIVRFSGKE-------------------LPLKLKVKAGI 252
+ + N Y+K L+ I +++ IV E +P+ + VK +
Sbjct: 181 AELYISNKQYDKALETITDYSGIVLERTSEEGPLEESTAGRVTCSIPEGVPIDIMVKLMV 240
Query: 253 CYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
C + L +E L L +N D DL +VA+ + +G NSAL L + +
Sbjct: 241 CLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYN 300
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
++L+ AEC +L A + K +D ++DAR++L++L + + E+A+ L
Sbjct: 301 LAVVWLRHAECLKALGYMERAAESYSKVVDLAPLHLDARISLSTLQQQLGRPEKALEALE 360
Query: 373 PPKDLDSLDMNSDKS 387
P D D+L +++ +
Sbjct: 361 PMYDPDTLAQDANAA 375
>gi|371940866|ref|NP_001243171.1| general transcription factor 3C polypeptide 3 [Danio rerio]
Length = 918
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 134/715 (18%), Positives = 304/715 (42%), Gaps = 111/715 (15%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
NKK + + ++KL + ++GEA+++YA G+ E AI + E++R +P E ++T+ +
Sbjct: 152 NKKMMKERRHRSKLPRALRGLMGEANIRYARGDKEDAILMCMEIIRQAPVAYEPFSTMAM 211
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + A F +IAAHL+P D W +L ++++ + QA+ +AI+ + ++
Sbjct: 212 IYEDQGDMEKALQFGLIAAHLNPSDCEEWVKLADMSLEQDNIKQAIICYTKAIKYDSSNV 271
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++G++++A + Y +I L P + ++ A+ + + + +IG
Sbjct: 272 QYLWERSSLYEQVGEHKQAMDGYRRILSLLPPTDGEHFMQLSRDMAKSYYESSELPSAIG 331
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
++EE L+ HP +++ + + N+ ++K L+ +V+F G
Sbjct: 332 VMEEALERHPELVTHECVNMAAELFIANHQHDKALE-----ALVKFCGIVLKRQEKVETK 386
Query: 240 -------------------------------KELPLKLKVKAGICYLRLGNMEKAEILFA 268
+P+ ++ K +C + + + +
Sbjct: 387 LEEQTLTQDTEEDTKEDTEEEKGKVIEVVIPDAVPIDIRAKMMVCLIHQQVFKPLDPMLT 446
Query: 269 DLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLK 328
L ++ + DL +VA+ M G NSAL L + + ++L+ AEC +L
Sbjct: 447 SLMEQSPEELGDLYLDVAEAFMEEGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALG 506
Query: 329 ERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSN 388
A+ + K ++ +++ARL L++L + + A+ L P D ++L +S +
Sbjct: 507 HLEVAVKSYSKVVEMAPLHLEARLALSTLQQQLGRPNMALEALEPMYDAETLAQDSSAAQ 566
Query: 389 PWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQQR 448
K+++ + ++G +D++D + ++ L V +R
Sbjct: 567 Q---ELKLLLHRSTLLLSQGRMDDYIDTVLTMLSMFLKVAMVR----------------- 606
Query: 449 TKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDD 508
+++ V A ++ + +K + AL + E D
Sbjct: 607 ----------------------AQVCVVADMSSGVKHLKLIKVSRSALTEIVDQEAAYLD 644
Query: 509 TDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILP 568
++ ++L ++ L + L +R+ EA +++ ++
Sbjct: 645 VTGKT-----------SVLSKDDWWKLSLRCLSVLCEEKRFAEAELLVDSTLEYYSFYDD 693
Query: 569 LEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHS 628
K++EL LG A+ + ++ + +L WN + ++ ++S+ +
Sbjct: 694 RVKRKELEYLGLSAAFLDHNFRTAYNYIRLMLMDSVERPQLWNVFNQI-----TLHSQDA 748
Query: 629 KHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
+H +F L K+ D +++GH ++ + A Y++A++ P++PL +L
Sbjct: 749 RHHRFCLRLMLKHPDNHALYLLNGHTSLVSGTFKHALGQYMQAFRNEPDHPLHSL 803
>gi|260841675|ref|XP_002614036.1| hypothetical protein BRAFLDRAFT_113732 [Branchiostoma floridae]
gi|229299426|gb|EEN70045.1| hypothetical protein BRAFLDRAFT_113732 [Branchiostoma floridae]
Length = 896
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 145/703 (20%), Positives = 298/703 (42%), Gaps = 124/703 (17%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
N++ + ++GEA+L++A G ++ AI + EV+R P+ E + T + + G+ + +
Sbjct: 149 NEVPKPLRGLMGEANLRFARGKYDDAIKMCMEVIRQVPHCYEPFQTAAMVYEEKGDMERS 208
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
F +IAAHL+P+D W +L ++++ + +QA+ ++A+R +P +I + A+
Sbjct: 209 LQFALIAAHLNPQDPEEWVKLAEVSLEQNNISQAITCYKKALRYDPNNIGILWEQANLLE 268
Query: 148 EIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ + KA E Y+QI KL P+ +D + ++ + G+T +I ++ HP+
Sbjct: 269 QTQEPRKALEGYQQILKLLPEKEGNKYMDLMRDMSKTYHATGETEAAIETIQAAFTKHPT 328
Query: 203 DADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFS--------------------GK-- 240
+++L + + Y L+ + + V+ S GK
Sbjct: 329 LVTFEDVNMLTELYVTMKQYRHVLEAMSNYCSVQLSWQGGVTDTMAALDRLGMPDTGKQE 388
Query: 241 ----------ELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLM 290
E P+ L +K + + L + A L L ++A D DL ++A+ +
Sbjct: 389 TQVMQCTIPPETPIDLSIKLAVSLVHLRYLAAARPLVDMLLQESAEDMGDLYLDIAEAYV 448
Query: 291 SLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
+G +SA L + ++L+ AEC +L + HA+ + K ++ ++ A
Sbjct: 449 DVGEYDSARPILAMLVNTERYNLAAVWLRYAECLNALGKTEHAVQSYAKVVEMAPSHLGA 508
Query: 351 RLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMP 410
RL+L++L + + EEA+ LS + +++ S + P + +++ + ++G
Sbjct: 509 RLSLSALQQQLGRPEEALQALS--EAVETAAQVSSQPGP---DVQLLHHKSTLLYSQGRM 563
Query: 411 EDFVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPK 470
EDFVD+ L+ S E Q+ ++ +TK ++R K
Sbjct: 564 EDFVDS--ALLMLSKYFEEAYQQQNLQLVVTKITSRRR---------------------K 600
Query: 471 SELLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNE 530
+L + + + + ++ + L+ + +EW
Sbjct: 601 YQLRAMVKEQGGVGQGRSVVDLSGKLSSISKLEWWD------------------------ 636
Query: 531 ENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSL---------GAK 581
L ++L +L R EE + ++ L K++EL+ + +
Sbjct: 637 ----LFCKASRSLTTLGRTEEVEHLTMAALASPQFERDLAKQKELKYMILSACCLNKNYR 692
Query: 582 MAYDSTDP----NHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYL 637
MAY P N G + QL WN + ++ + +S+ ++H +F L
Sbjct: 693 MAYVFVRPMIMENTGVN------QL-------WNVFSQITT-----SSEDARHHRFCLRL 734
Query: 638 RAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPL 680
K + ++GH ++ ++ A Y+ AY+L P NP+
Sbjct: 735 MIKNPHNIALSFLNGHNSLISGTYKHALGEYVRAYRLDPSNPM 777
>gi|296205145|ref|XP_002749632.1| PREDICTED: general transcription factor 3C polypeptide 3
[Callithrix jacchus]
Length = 889
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 190/401 (47%), Gaps = 32/401 (7%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 310 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIVLEKKTSEEGTSEEGT 369
Query: 242 -----------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+P+ + VK +C + L +E L L +N D DL +
Sbjct: 370 SEENKAPENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLD 429
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 430 VAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLA 489
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
++DAR++L++L + + E+A+ L P D D+L +++
Sbjct: 490 PLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDAN 530
>gi|348555157|ref|XP_003463390.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Cavia porcellus]
Length = 883
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 191/392 (48%), Gaps = 28/392 (7%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
+KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 128 SKKMMKEKRPRSKLPKALRGLMGEANIRFARGKREEAILMCMEIIRQAPLAYEPFSTLAM 187
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP +I
Sbjct: 188 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNI 247
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S ++GD++ A + Y +I L P + + + A+ + + A +I
Sbjct: 248 RFLWERSSLCEQMGDHKMAMDGYRRILNLLPASDGERFMQLARDMAKSYYEASDGASAIN 307
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI---------------------- 229
I+EE H + + +++ + + N Y+K L+ I
Sbjct: 308 IMEEAFSKHQALVSMEDVNMAAELYISNKQYDKALEVITDFSGIVLEKKALDEGSPPEEH 367
Query: 230 EHAQIVRFSGKE-LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADT 288
E A+ V + E +P+ + VK + + L +E L L +N D DL +VA+
Sbjct: 368 EAAETVTCAIPEGVPIDIMVKLMVSLVHLNILEPLSPLLTTLVEQNPEDMGDLYLDVAEA 427
Query: 289 LMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNI 348
+ +G SAL L + ++L+ AEC +L A + K ++ ++
Sbjct: 428 FLDIGEYGSALPLLSALVCSERYSLAVVWLRHAECLKALGYMERAAESYSKVVELAPLHL 487
Query: 349 DARLTLASLLLEEAKEEEAITLLSPPKDLDSL 380
DAR++L++L + + E+A+ L P D D+L
Sbjct: 488 DARISLSTLQQQLGRPEKALEALEPMYDPDTL 519
>gi|241713562|ref|XP_002412106.1| conserved hypothetical protein [Ixodes scapularis]
gi|215505183|gb|EEC14677.1| conserved hypothetical protein [Ixodes scapularis]
Length = 778
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 151/700 (21%), Positives = 277/700 (39%), Gaps = 127/700 (18%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
++L + ++GEA+L +A G+ E AI + EV+RL P PE + TLG+ + +G+ A
Sbjct: 5 SRLPKDLQGLMGEANLCFARGDHEDAIKMCMEVIRLVPRAPEPFQTLGMLYEEMGDPAKA 64
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
F +I AHLSP D+ W +L ++++GD QA +A+RA+P ++ LR+ L + Y
Sbjct: 65 LQFSLIGAHLSPDDADEWARLGELSLEQGDVRQATTCYARAVRADPSNLDLRLELCTLYE 124
Query: 148 EIGDYEKAAESYEQ-IQKLFPDN----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ G+ KA + +Q++ P + ++ A++ + G A +I +L+ L PS
Sbjct: 125 QAGEQRKALDCCSSLVQQMGPSQGAQCLQLSRELAKVHHQRGNVAAAINVLQSALTKCPS 184
Query: 203 DADLSVIDLLVAILMENNAYEKTLQHIE--------------------------HAQIVR 236
D +++L+ + + Y L + A +VR
Sbjct: 185 DIASEDVNMLLELQLGEKLYVDALMVLHTHCGVRLLPLEADKEFSSAISLETGASASLVR 244
Query: 237 FS---------------------------GKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
S LP+ L+VK + + L L
Sbjct: 245 TSLDRASRDIICCVVPTVSPSCLPLSCEVPNVLPVDLRVKLVLSLIHLDGQHLVLGLVEQ 304
Query: 270 LQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKE 329
L ++ + DL+ +VA+ + AL L + ++L+ AEC L
Sbjct: 305 LSTEDPEEVGDLMLDVAEAFLEKASPGRALPLLAQLVESKNYSLAAVWLRYAECLQQLGR 364
Query: 330 RAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNP 389
A + + + ARL L SLLL + + +EAI L P LDM +
Sbjct: 365 FEEATSVYRRVCRMAPGHAQARLALCSLLLRQGRTDEAIACLEP-----GLDMLVEGQRI 419
Query: 390 WWLNEK---IIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQ 446
L ++ ++++ + + FVDA L+C S C + T G+
Sbjct: 420 CLLQQEAAGVLLRRAQLLLEAKRNDAFVDAAMLLLC-SHCPQC---------HFTSGL-- 467
Query: 447 QRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAAGVEWHS 506
+RK K ++L + A EW +
Sbjct: 468 --------------------------------SRKAFTKGQSL---NCSFLHCAINEWDN 492
Query: 507 DDTDDESQQEAFREPPLPNLLKNEENQCLII-DLCKALASLQRYEEASEIINLSMRLAYN 565
+ Q A N+ +CL+ L + L L R +E + + ++
Sbjct: 493 SLEGNVLQLSAC-------FCLNDLRRCLLSWQLFRVLRELGRTKELQQAVTQALVSPLL 545
Query: 566 ILPLEKKEELRSLGAKMAYDSTD-PNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKIN 624
L + +E+ L Y+ D H + ++ ++ +P ++ AWN + ++
Sbjct: 546 NKELSRTKEMEFLSLVAHYNDPDVEEHTYSLSRALVLKNPKNIRAWNLFGLAVN-----V 600
Query: 625 SKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDA 664
S +H++F L KY D +P +++GH ++ ++ A
Sbjct: 601 SPVMRHNRFCLRLLYKYPDSIPLGLLNGHNALVSGTYKHA 640
>gi|291391959|ref|XP_002712408.1| PREDICTED: general transcription factor IIIC, polypeptide 3, 102kDa
[Oryctolagus cuniculus]
Length = 883
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 190/398 (47%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+A+ + E++R +P E ++TL +
Sbjct: 129 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAVLMCMEIIRQAPLAYEPFSTLAM 188
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA + +A++ EP ++
Sbjct: 189 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQASFCYTKALKYEPTNV 248
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 249 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVISAIN 308
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGK----------- 240
++EE H + +++ + + N Y+K L+ I + K
Sbjct: 309 VIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIMLEKKIAEDGTLEENT 368
Query: 241 -----------ELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 369 AGENIIYTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 428
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G +SAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 429 LDVGEYSSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 488
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 489 ARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 526
>gi|328768707|gb|EGF78753.1| hypothetical protein BATDEDRAFT_90536 [Batrachochytrium
dendrobatidis JAM81]
Length = 1107
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 187/426 (43%), Gaps = 64/426 (15%)
Query: 6 YGGYRKKTRKLNKKRGRR--KG---SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEV 60
+ G + K + +GRR KG +K ++ + G+A+L Y G ++AI L E+
Sbjct: 253 FTGKMGRNSKKRRGKGRRFAKGQSQAKTRIPEALQSTFGKANLAYTMGQHDEAIKQLHEI 312
Query: 61 VRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQ 120
+R +PN ++TL + H LGN A Y++AAHL KD+ LWK+L + GD Q
Sbjct: 313 IRQAPNAQPAWSTLAMVHEELGNKSKAVQAYLMAAHLLFKDAELWKRLARMSEDIGDMNQ 372
Query: 121 AMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLF 180
A+Y + +A+RA+P D+ + A + ++G E+AA + I ++ PD+VDA K A+++
Sbjct: 373 ALYCLNKAVRADPDDLECKWSRALIHRDLGRLEQAAYGLQDILEIIPDSVDAVKELARIY 432
Query: 181 LKCGQTARSIGILEEYLKVHPSDA--------------DLSV------------------ 208
+ ++I E + + +D DL++
Sbjct: 433 VLLEDIPQAIRYFESLMSMDEADCFPTAGTQDEDGVGNDLALLVKDTALDAASDLPDQYR 492
Query: 209 -----IDLLVAILMENNAYEKTLQHIEHAQIVRF---------------------SGKEL 242
+++L + +E YEK + I+ + R + L
Sbjct: 493 MGYEELNMLSELYIEVGEYEKAIFTIKQG-VHRLCKLPLTVIDCDTDNEFDPCLENTIHL 551
Query: 243 PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY 302
P++L+ K GIC L LG+ A+ F L + +++L +VA+ M A +
Sbjct: 552 PIELRTKLGICRLYLGDSTLAQYHFDILYEEGTETYSELYFDVAEAYMGCRKFAPAFEIL 611
Query: 303 HFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEA 362
L N T+ + ++A C L AI + A DN D + +LA +
Sbjct: 612 KVLTQNESTNVSVTWSRMARCQHQLGNNTMAIKLYRNASKADPDNADLKRSLAEIYEALG 671
Query: 363 KEEEAI 368
E +A+
Sbjct: 672 DETQAL 677
>gi|330805145|ref|XP_003290547.1| hypothetical protein DICPUDRAFT_155061 [Dictyostelium purpureum]
gi|325079334|gb|EGC32939.1| hypothetical protein DICPUDRAFT_155061 [Dictyostelium purpureum]
Length = 913
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 148/666 (22%), Positives = 278/666 (41%), Gaps = 79/666 (11%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
++L +A+ Y G + +A S EV+R+ P L YN LG GN K A F++ A
Sbjct: 196 EILTKANDFYTRGKWNEATSHYAEVIRMVPRLSLPYNILGKIREITGNPKEALSFFIYGA 255
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ ++ LW A G+ A+Y +A R + DI + DY++A
Sbjct: 256 QIEGNNNELWVSTGHRAKALGNLDTALYCFTRAFRCDSSDIDSLWERCELLINKKDYKRA 315
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL-----EEYLKVHPSD-ADLSVI 209
++ + P N + A+++ GQ ++ ++ E+ L +P + L +
Sbjct: 316 IPGLLKLVSMDPKNPQILEELAKVYSYLGQYHDAVEVIQPMVKEQLLPENPLEYVSLDTV 375
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAE----I 265
+LL+ + + T+ + S +P+ + + Y +G E +
Sbjct: 376 NLLMEFYNKIRNFTDTILTYNKISVKFGSENNVPVDMLSNVIVAYFSIGTEGGTERGTRL 435
Query: 266 LFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYL 325
L + + DL +++ ++L LG + AL+ + L+ + D ++K+AECY
Sbjct: 436 LNSRFLPIDPQQVCDLFSDMGESLYQLGRYSEALQTFLRLK-DTIYDQASTWVKIAECYR 494
Query: 326 SLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
LK AI + KA + DN++ + ++ + E EE+A+ +L+ SD
Sbjct: 495 YLKNLPAAIEYLSKANKQVPDNVNTTIAMSEIYKEMGDEEKALQILNQSSSF------SD 548
Query: 386 KSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQK-----VKVKRRL 440
K+ E IF + L E+ R+K VK+ R
Sbjct: 549 KN-----------------------EQTEKEIFATTLKEL--ESKREKITPNEVKITFRH 583
Query: 441 TKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAA 500
+ L NL S GI A LL + + +++K ++ K
Sbjct: 584 AEAFL--------NLSKYSQFLGIATA-----LLHGSNDKCYLRRKISV----GLYRKRR 626
Query: 501 GVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSM 560
D S F E LL E+ L+++ K L+ L R++EAS+ + ++
Sbjct: 627 RSIKRGRRADSNSSNSPFAE-----LLDEEDYFSLLVETSKVLSHLNRHQEASQYLRYAL 681
Query: 561 RLAYNILPLEKK---EELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVL 617
R NI E +L+ + ++++ + F KY+ PY WN + K++
Sbjct: 682 R---NI-KFENSLFTHQLKFIAVGVSFNDKNYYLAFKYVKYVCSKKPYDNKVWNLFNKII 737
Query: 618 SRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPE 677
G + + ++F+ + KY + +P +++ G+Q + + A Y++AY++ P+
Sbjct: 738 VNYG---GRSTVQNRFLAKIYEKYPNSLPVLVMIGNQNKQTDNVRGALFEYIKAYRISPD 794
Query: 678 NPLINL 683
+PLINL
Sbjct: 795 DPLINL 800
>gi|126326463|ref|XP_001369886.1| PREDICTED: general transcription factor 3C polypeptide 3
[Monodelphis domestica]
Length = 883
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 195/401 (48%), Gaps = 37/401 (9%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 129 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 188
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +I+AHL+P D+ W +L ++++ + QA++ +A++ +P ++
Sbjct: 189 IYEDQGDMEKSLQFELISAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYDPTNV 248
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++G+++ A + Y +I L P + + + A+ + + +I
Sbjct: 249 RYLWERSSLYEQMGEHKMAMDGYRRILNLLSPFDGERFMQLARDMAKSYYEASDVTSAIN 308
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG------------ 239
I+EE H S + +++ + + N ++K L+ I FSG
Sbjct: 309 IIEEAFSKHQSLVSMEDVNIAAELYISNKQHDKALE-----VITDFSGIVLWKKVIDKSM 363
Query: 240 ---------------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+ +P+ + VK +C + L ++ + L L +N D DL +
Sbjct: 364 PEENKAEEKVTCTIPEGVPIDITVKLMVCLVHLNILDPLDSLLTTLVEQNPEDMGDLYLD 423
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
VA+ + +G NSAL L + + ++L+ AEC +L A + K +D
Sbjct: 424 VAEAFLDVGEYNSALPLLTALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLA 483
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
++DAR++L++L + + E+A+ L P D D+L +++
Sbjct: 484 PLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDAN 524
>gi|395519978|ref|XP_003764116.1| PREDICTED: general transcription factor 3C polypeptide 3
[Sarcophilus harrisii]
Length = 883
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 199/398 (50%), Gaps = 27/398 (6%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 129 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 188
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +I+AHL+P D+ W +L ++++ + QA++ +A++ +P ++
Sbjct: 189 IYEDQGDMEKSLQFELISAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYDPTNV 248
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++G+++ A + Y +I L P + + + A+ + + +I
Sbjct: 249 RYLWERSSLYEQMGEHKMAMDGYRRILNLLSPFDGERFMQLARDMAKSYYEANDVTSAIN 308
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-EHAQIVRFSG----------- 239
I+EE H + + +++ + + N ++K L+ I +++ IV +
Sbjct: 309 IIEEAFSKHQNLVSMEDVNIAAELYISNKQHDKALEVITDYSGIVLWKKVIEKSMPGENR 368
Query: 240 ----------KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+ +P+ + VK +C + L ++ + L L +N D DL +VA+
Sbjct: 369 AEEKVTCTIPEGVPIDITVKLMVCLVHLNILDPLDSLLTTLVEQNPEDMGDLYLDVAEAF 428
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +G NSAL L + + ++L+ AEC +L A + K +D ++D
Sbjct: 429 LDVGEYNSALPLLTALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 488
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
AR++L++L + + E+A+ L P D D+L +++ +
Sbjct: 489 ARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAA 526
>gi|348534603|ref|XP_003454791.1| PREDICTED: general transcription factor 3C polypeptide 3
[Oreochromis niloticus]
Length = 900
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 158/734 (21%), Positives = 303/734 (41%), Gaps = 128/734 (17%)
Query: 17 NKK--RGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
NKK +GRR GSK L + ++GEA+++YA G E AI + E++R +P E ++TL
Sbjct: 113 NKKMMKGRRHGSK--LPRALRGLMGEANIRYARGEKEDAILMCMEIIRQAPLAYEPFSTL 170
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
+ + + A F +IAAHL+P D W +L ++++ + QA+ +AI+ +P
Sbjct: 171 AMIYEDEEDMSKALQFGLIAAHLNPSDCEEWIRLAVMSLEQDNIQQAIICYSKAIKYDPT 230
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFP-----DNVDATKTGAQLFLKCGQTARS 189
++ S + +G++++ + Y +I L P + +K A+ + + +
Sbjct: 231 NVCYLWERCSLQMRLGEHKQCMDGYRRILSLLPLEDGEHFIQLSKDMAKSYYESSDLPSA 290
Query: 190 IGILEEYLKVHPS--------------------DADLSVIDLLVAILM------------ 217
+ ++EE L HP + L V+ V I++
Sbjct: 291 LSVIEEALARHPDLVSDDFINMAAELYITNRQYNKALQVLVQFVGIVLVRSESTPDVIPP 350
Query: 218 -------ENNAYEKTLQHIEHAQIVR---FSGKE------------LPLKLKVKAGICYL 255
E + ++ Q+ E Q+ + + +E +P+ L+ K +C++
Sbjct: 351 TQEEKIKEESTEDQEKQNAEGTQLQKEEQIAAEENGEIVDVQVPDSVPVDLRSKLIVCFI 410
Query: 256 RLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY 315
L E L + L ++ + DL +V + + G SAL L + +
Sbjct: 411 HLHVYAPTEGLVSTLMEQSPEEIGDLYLDVGEAYLEEGKYMSALPLLTALVVSEKYNLAV 470
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPK 375
++L+ AEC +L A + K ++ +++ARL+LA+L + + + A+ L
Sbjct: 471 VWLRHAECLKALGHMEAAAESYTKVVEMAPQHLEARLSLATLQQQLGRMDCALKALESMY 530
Query: 376 DLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVK 435
D + L +S + K+++ + + +G +D++D + ++ L V R KV
Sbjct: 531 DSNILAHDSSAAQK---ELKLLLHRSTLLKTQGKMQDYLDTVITMISMLLKVAMQRAKVC 587
Query: 436 VKRRLTKGILQQR-TKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKK 494
V G R K+ + LP + + +
Sbjct: 588 VSSVNVSGENHLRLVKVEDMLPE-------------------------------IADHET 616
Query: 495 ALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASE 554
A G+ T N+L E+ L++ L +QRYEEA
Sbjct: 617 AYLDNTGMRIFGCKT---------------NVLSKEDWWQLLLSCVLTLCEVQRYEEAEM 661
Query: 555 IINLSMRL--AYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYI--LQLHPYSL-SA 609
+++ +M Y+ P K+ E L A + D N+ + YI + L +L
Sbjct: 662 LVDSAMEFYSFYDNKPRRKELEFIGLSATI----LDHNY-YKAYNYIRLMLLENVALPQL 716
Query: 610 WNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYL 669
WN + ++ I S+H +H +F + K+ D ++ GH ++ + A Y+
Sbjct: 717 WNIFNQL-----TITSQHQRHHRFCLRMLFKHPDSHALCVLCGHNAMVSGSFKHALGQYV 771
Query: 670 EAYKLLPENPLINL 683
+A++ P NPL +L
Sbjct: 772 QAFQTHPSNPLHSL 785
>gi|348681538|gb|EGZ21354.1| hypothetical protein PHYSODRAFT_497432 [Phytophthora sojae]
Length = 903
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 153/672 (22%), Positives = 288/672 (42%), Gaps = 90/672 (13%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
AI+LLK+ ++ +P +P+ Y+TLG+ + + A F++IA L+P+D+ LWK++ A
Sbjct: 105 AITLLKDFIKKAPTIPDPYHTLGMIYEDRQDRIKALQFFLIACTLTPQDAELWKRVGRIA 164
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
+ + QA++ ++A A+PKD A E GD +AAE ++++ L P+++
Sbjct: 165 KDEKNFDQALFCFKKASSADPKDKEALFSYAELCREQGDNRRAAEVFKKLTVLIPNDLSL 224
Query: 173 TKTGAQLFLKCGQTARSI----------GILEEYLKVHPSDADLSVIDLLVAILMENNAY 222
A+ + Q ++ L+ +H S +L+ +++L + + Y
Sbjct: 225 WIQIAEAYHCNEQEDEAVDALKMCIEKAATLDPTRNLHSSKYELNAVNMLADLYITLKKY 284
Query: 223 EKTLQHIEHAQIVRFSGKE----------LPLKLKVKAGICYLRLGNMEKAEILFADLQW 272
+ ++ I H S ++ LPL + VK GIC+L + AE +F L
Sbjct: 285 REAIEVIHHLHARYASAQDPDQVEGDPGGLPLDIAVKYGICHLFERDFATAESMFTHLFA 344
Query: 273 KNAIDHADLITEVADTLMSLGHSN-SALKYYHFLETNAGTDNGYLYLKLAECYLSLKERA 331
++ DL +VAD ++LG + A L +++K AEC+ L
Sbjct: 345 QDVEVFGDLYLDVADAYIALGDQDREAAAILQQLLGREEFPVEQIWIKFAECHDRLGIYD 404
Query: 332 HAIMFFYKALDRFEDN----IDARLTLASLLLEEAKEE--EAITLLSP--PKDLDSLDMN 383
A+ ++ KAL + +D L L ++ K E I LL P+ +
Sbjct: 405 VAVEYYEKALAHQRSSPDLTVDPELMLKAMQATRKKNSPLEGIALLKEYLPETM------ 458
Query: 384 SDKSNPWWLNEKIIMKLCHIYRAKG--MPEDFVDAIFPLVCE------------------ 423
P+W+N K A+G +D D+ V E
Sbjct: 459 RPPIRPYWINTSRKNKDQDEASAQGDENGKDPADSDVEEVEEEAEDDDEDAEDQTRMEMA 518
Query: 424 ---SLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCG-----IRPAAPKSELLV 475
SL V+A+ +++K + G L++ + +LC I + ++ +
Sbjct: 519 PDPSLSVDAMENDIRLKLLIEWGHLKKLSG------EAEVLCQVGIPIILTSLSQTSFRL 572
Query: 476 AARARKKIQKKEALKEEKKALAKAAGV--EWHSDDTDDESQQEAF--------REPPLPN 525
+ R + + + + + E A + V + D D Q+E+F ++ +
Sbjct: 573 SGRVKNPLAEPQDVISESDAQSMGFQVLKSQYLVDITDSRQRESFMGIVMRVAQQIVISR 632
Query: 526 LLKNEENQCLIIDLCKALASLQRYEEASEI---INLSMRLAYNILPLEKKEELRSLGAKM 582
L + L+ID+ + L L +Y A E+ +N S +++ L + ELR L +
Sbjct: 633 ALGEQLYYNLVIDVAQTLTELGKYVAAIELLTDVNTSDKISKPTL----RFELRFLALVI 688
Query: 583 AYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYK 642
A + + ++CA+ + P++L WN + +V++ I S H KF+ L
Sbjct: 689 ALEFKENRMAYECARLNIMEDPHNLGYWNLFSRVIA----ITGVFSWHQKFLAKLLRDDP 744
Query: 643 DCVPPIIISGHQ 654
+ P I+++GHQ
Sbjct: 745 ESYPAILLAGHQ 756
>gi|47218618|emb|CAG04947.1| unnamed protein product [Tetraodon nigroviridis]
Length = 727
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 197/419 (47%), Gaps = 34/419 (8%)
Query: 12 KTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETY 71
K + NKK + + ++KL + ++GEA+++YA G E+AI + E++R +P E +
Sbjct: 120 KLNRENKKMMKERRHRSKLPRALRGLMGEANIRYARGEKEEAIMMCMEIIRQAPLAFEPF 179
Query: 72 NTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA 131
+TL + + + + A F +IAAHL+P DS W +L ++Q+ + QA+ +AI+
Sbjct: 180 STLAMIYEDDEDTEKALQFGLIAAHLNPSDSEEWIRLAEMSLQQDNIRQAILCYTKAIKY 239
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQT 186
+P ++ ++ ++ +G+ ++ + Y +I L P + +K A+ + +
Sbjct: 240 DPTNVRYLWERSNLHMRMGEQKQCMDGYRRILSLLPMEEGEHFMQLSKDMAKSYYESNDL 299
Query: 187 ARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH-IEHAQIV---------- 235
++GI+EE L HP +++ + + + Y K LQ ++ A IV
Sbjct: 300 GAALGIIEEALDRHPGLVSDDFVNMAAELNIAKHNYSKALQVLVQFAGIVLIRDESRMDV 359
Query: 236 -------RFSGKE-----------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID 277
+ G+E +P+ LK K +C + L E L L ++A +
Sbjct: 360 ATTADKEKVPGQECKIKDVQVPDSIPVDLKAKLIVCLIYLHVSTPLEGLVTSLMEQSAEE 419
Query: 278 HADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFF 337
DL +VA+ + G SAL L + + ++L+ AEC +L + A +
Sbjct: 420 IGDLYLDVAEAYLDQGEYVSALPLLSVLVVSEKYNLAVVWLRHAECLKALGDMEMAAESY 479
Query: 338 YKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKI 396
K + +++ARL+LA+L + + E A+ L D ++L +S S L E +
Sbjct: 480 TKVVQMAPLHLEARLSLATLQQQLGRPEHALKALESMYDSETLAQDSSASQKLMLMENV 538
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 610 WNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYL 669
WN + ++ I S+H +H +F L K+ D ++ GH ++ + A Y+
Sbjct: 544 WNIFNQL-----TITSQHQRHHRFCLRLLLKHPDSHALWVLCGHNAMVSGSFKHALGQYV 598
Query: 670 EAYKLLPENPLINL 683
+A++ P+NPL +L
Sbjct: 599 QAFQTHPDNPLYSL 612
>gi|403267351|ref|XP_003925800.1| PREDICTED: general transcription factor 3C polypeptide 3 [Saimiri
boliviensis boliviensis]
Length = 877
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 189/394 (47%), Gaps = 30/394 (7%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 130 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 189
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 190 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L + + + A+ + + +I
Sbjct: 250 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 309
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAG 251
I++E H + +++ + + N Y+K L+ I FSG L K +
Sbjct: 310 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALE-----VITDFSGIVLEKKSSEEGT 364
Query: 252 ----------------ICYL----RLGNMEKAEILFADLQWKNAIDHADLITEVADTLMS 291
+C L R+ E + L L +N D DL +VA+ +
Sbjct: 365 SEEGTSEEGTSEENKVLCSLVEDVRVCFGEVRKPLLTTLVEQNPEDMGDLYLDVAEAFLD 424
Query: 292 LGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDAR 351
+G NSAL L + + ++L+ AEC +L A + K +D ++DAR
Sbjct: 425 VGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDAR 484
Query: 352 LTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
++L++L + + E+A+ L P D D+L +++
Sbjct: 485 ISLSTLQQQLGRPEKALEALEPMYDPDTLAQDAN 518
>gi|432904360|ref|XP_004077292.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Oryzias latipes]
Length = 929
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 220/495 (44%), Gaps = 60/495 (12%)
Query: 17 NKK--RGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
NKK +GRR GSK L + ++GEA+++YA G + A+ + E++R +P E ++TL
Sbjct: 156 NKKHMKGRRHGSK--LPTALRGLMGEANIRYARGEKDTAVQMCMEIIRQAPLAYEPFSTL 213
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
+ + G+ + F +IAAHL+P D W +L ++++ + QA+ +AI+ +P
Sbjct: 214 AMIYEDEGDTDKSLQFSLIAAHLNPSDCEEWIRLAEMSLEQNNIRQAIICYSKAIKYDPT 273
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFP-----DNVDATKTGAQLFLKCGQTARS 189
++ +S ++ +G++++ + Y +I L P + +K A+ + + +
Sbjct: 274 NVRYLWERSSLHMRLGEHKQCMDGYRRILSLLPLEDGEHFMQLSKDMAKSYYESNDLPSA 333
Query: 190 IGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI----------EHAQI-VRFS 238
+ ++EE L HPS +++ + + + + K LQ + E+A V +
Sbjct: 334 LSVIEEGLSRHPSLVGDDFVNMAAELYISSRQHSKALQVLVKFTDVVLVRENATAEVPYR 393
Query: 239 GKE------------------------------------LPLKLKVKAGICYLRLGNMEK 262
G+E +P+ L+ K +C + L
Sbjct: 394 GEEAAEKKEANDKGAALNLPEEMPAESCGDIKAVQIADSVPVDLRAKLMVCLINLQVFTP 453
Query: 263 AEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAE 322
E L L ++ + DL +V + + G SAL L + + ++L+ AE
Sbjct: 454 LEPLVLSLMEQSPEEIGDLYLDVGEAYLEQGCYTSALPLLSALVISDKYNLAVVWLRHAE 513
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDM 382
C +L A + K ++ +++ARL+LA+L + + A+ L D D+L
Sbjct: 514 CLKALGHMEAAADSYSKVVEMAPQHLEARLSLATLQQQLGHMDCALKALESMYDSDTLAQ 573
Query: 383 NSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTK 442
+S + K+++ + + +G D++DA+ ++ L V R KV V+
Sbjct: 574 DSSAAQK---ELKLLLHRSTLLKTQGQLHDYLDAVISMISMLLKVAMQRAKVCVRAVPLS 630
Query: 443 GILQQR-TKIYNNLP 456
G+ R K+ LP
Sbjct: 631 GVTHLRLQKLEERLP 645
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 525 NLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRL--AYNILPLEKKEELRSLGAKM 582
N+L E+ L++ L L+RY+EA ++ +M Y+ P ++ EL G
Sbjct: 662 NVLSKEDWWQLLVSCILTLCQLERYDEADLLVESAMEFYSFYDNKP--RRRELECFG--- 716
Query: 583 AYDSTDPNHGFDCAKY----ILQLHPYSL-SAWNCYYKVLSRMGKINSKHSKHSKFIRYL 637
+T +H + C Y ++ + +L WN + ++ INS+H +H +F L
Sbjct: 717 -LSATILDHNY-CKAYNYIRLMLIENVNLPQLWNIFNQL-----TINSQHQRHHRFCLRL 769
Query: 638 RAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
KY + ++ GH ++ + A Y++A++ P+NPL +L
Sbjct: 770 LLKYPNNHALCVLCGHNAMVSGSFKHALGQYVQAFQTHPDNPLYSL 815
>gi|296413749|ref|XP_002836571.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630399|emb|CAZ80762.1| unnamed protein product [Tuber melanosporum]
Length = 987
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 183/414 (44%), Gaps = 57/414 (13%)
Query: 14 RKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNT 73
+K + GRR+ S + +LG+A+ YA+G ++A+ L+K+++ + P + +
Sbjct: 91 KKHRRTGGRRQIGDEIYSFEIRGLLGQANSAYAFGKLDEAMKLVKQIIHIEPGVYSAWKI 150
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDT------AQAMYYIRQ 127
LG G+ + ++ AAH PKD LW ++ + T QA+Y +
Sbjct: 151 LGEIFKEKGDKRKCLLAWLTAAHARPKDWELWVICAKMSLGQYGTDNRAYKDQAVYCYNR 210
Query: 128 AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
AI A+P +I A E G KAAE + + +L P+++ K A L+++ +
Sbjct: 211 AISAKPDNIDAIYDRALLLKESGSLNKAAEGFVTLNRLLPNDMSVLKELAGLYIEMDKVP 270
Query: 188 RSIGILE---EYLKV--HPSDA-DLSVIDLLVAILMENNAYEKTLQHI------------ 229
+I EY K +P +A S +++ V + + K + I
Sbjct: 271 EAIEYYRRSVEYFKATGNPDNAFGWSELNIFVELYCLEKQWAKAIDTIGSVGRWLCGRAV 330
Query: 230 -------------------------EHAQIVRFSGKE--LPLKLKVKAGICYLRLGNMEK 262
++ RF + LPL+L+VK G+C LRLGNME+
Sbjct: 331 ETYWDKVNGDDREWDSDDRPRRCMVREFEVDRFQKESYCLPLELRVKLGLCRLRLGNMEE 390
Query: 263 A----EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYL 318
A +IL + Q N+ ++DL EV D L GH N A+ YY + A + L+
Sbjct: 391 AMHHFQILHTEAQ--NSPSYSDLFQEVGDALYGGGHFNEAISYYSVVVEGAVYLDRKLWF 448
Query: 319 KLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
+A+CY L A + L+ + + +A + LA + ++ +A+ L++
Sbjct: 449 NMADCYKGLDNIEDAEDCYGTVLEAYPRDDEAMMQLAGIYEVTGRKADALDLVN 502
>gi|390364268|ref|XP_787951.3| PREDICTED: general transcription factor 3C polypeptide 3
[Strongylocentrotus purpuratus]
Length = 832
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 191/411 (46%), Gaps = 35/411 (8%)
Query: 4 INYGGYRKKTR----KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKE 59
I G R+K R +L+K R RR ++ + ++G+A L +A +QA + E
Sbjct: 116 IMRGLRRRKCRVPPAELHKHRRRR----TRVPKNLRGLMGQAHLCFARKEHDQATKMCME 171
Query: 60 VVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTA 119
++R +P E + LG+ + LG+ + + F +IAAH+SP+D+ W+QL +++ D
Sbjct: 172 IIRQAPRSVEPFQLLGMIYEDLGDMEKSMQFQLIAAHISPRDTEQWQQLADVCLERDDLE 231
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV--DATKTGA 177
+A+Y + ++ I A Y+ +G+ +KA ESY I K P + +
Sbjct: 232 KAVYCYTKVLKFNNHHIPTLHARAGLYIRLGENKKAMESYHTIIKHLPQDEWHQGIQVAR 291
Query: 178 QLFLKC---GQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-EHAQ 233
+L +C G+ +I +E +K P ++ + + + + Y++ +Q + +H
Sbjct: 292 ELVQRCHNLGEVNLAIEAMETLVKRFPDHISSEEVNTIAELYISSRQYQRAIQVMCDHCG 351
Query: 234 IVRFSGK-----------------ELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI 276
+ GK LP+ L+VK IC + ++ ++ L ++
Sbjct: 352 VRVELGKVEPSRAEPEAVNVHIPDGLPIDLRVKLAICLIHSRHLTPVAMVTQPLFSEDPE 411
Query: 277 DHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMF 336
+ DL +VA+ + + +A L + ++L+ AEC SL E A +
Sbjct: 412 EMGDLYLDVAEAYIEINDYEAAKPILAALVAAKNYNLPAVWLRYAECLNSLGELAESSRA 471
Query: 337 FYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKS 387
+ + L + ++DARL LA++ + + E A+ L+ LD ++ + D++
Sbjct: 472 YSEVLKQAPRHLDARLALAAIEQQLGRAESALQTLT----LDPVEQDDDQA 518
>gi|410906231|ref|XP_003966595.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Takifugu rubripes]
Length = 900
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 158/738 (21%), Positives = 304/738 (41%), Gaps = 131/738 (17%)
Query: 12 KTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETY 71
K + NKK + + ++KL + ++GEA+++YA G E AI + E++R +P E +
Sbjct: 113 KLNRENKKMMKERRHRSKLPRALRGLMGEANIRYARGEKEDAIMMCMEIIRQAPLAFEPF 172
Query: 72 NTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA 131
+TL + + + A F +IAAHL+P DS W +L ++++ + QA+ +AI+
Sbjct: 173 STLAMIYEDDEDADKALQFGLIAAHLNPSDSEEWIRLAEMSLEQDNIRQAILCYTKAIKY 232
Query: 132 EPKD---------------------------------------ISLRIHLASFYVEIGDY 152
+P + + L +A Y E D
Sbjct: 233 DPTNVRYLWERSNLHMRLGEQKQCMDGYRKILSLLPMEEGEHFMQLSKDMAKSYYESNDL 292
Query: 153 EKAAESYEQIQKLFPDNV--DATKTGAQLFLKCGQTARSIGILEEY-------------L 197
A E+ P+ V D A+L + ++++ +L ++ +
Sbjct: 293 AAALGIIEEALDRHPELVSDDFVNMAAELNIASHHYSKALQVLVKFAGIVLITDESRMDV 352
Query: 198 KVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGK--------ELPLKLKVK 249
D ++S V E N +TL E A +GK +P+ LK K
Sbjct: 353 TTPAGDGEVSEQPCEVQESSEENTKSQTLTAEEAA--AENNGKIKDVQVPESIPVDLKAK 410
Query: 250 AGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNA 309
+C + L E L L ++ + DL +VA+ + G SAL L +
Sbjct: 411 LIVCLIHLHVSTPLERLVTSLMEQSPEEIGDLYLDVAEAYLDKGEYASALPLLSVLVVSD 470
Query: 310 GTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
+ ++L+ +EC +L + A + K + +++ARL+LA+L + + E A+
Sbjct: 471 KYNLAVVWLRHSECLKALGQMEMAAESYTKVVQMAPLHLEARLSLATLQQQLGRPEHALK 530
Query: 370 LLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEA 429
L D ++L +S + K+++ + + +G +D++DA+ ++ S+ ++
Sbjct: 531 ALESMYDSETLARDSSAAQK---ELKLLLHRSTLLKTQGQKQDYLDAMISMI--SMLLKV 585
Query: 430 LRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKSELLVAARARKKIQKKEAL 489
Q+ KV R ++V+ + ++ K + L
Sbjct: 586 AMQRAKVCVR--------------------------------SVIVSGESHLRLVKVKEL 613
Query: 490 KEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRY 549
+ E A +AA + D+T N+L E+ L++ L ++RY
Sbjct: 614 EPEI-ADHEAA----YLDNTGK------------TNVLSREDWWQLLVSCVLTLCEVKRY 656
Query: 550 EEASEIINLSMRL--AYNILPLEKKEELRSLGAKMAYDSTDPNH--GFDCAKYILQLHPY 605
EEA ++ +M Y+ PL ++ E L A + D NH ++ + +L +
Sbjct: 657 EEAELMVESAMEFYSFYDNKPLRRELEFFGLSATI----LDRNHYNAYNYIRLMLMENVD 712
Query: 606 SLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAA 665
WN + ++ I S+H +H +F L K+ D ++ GH ++ + A
Sbjct: 713 PPQLWNIFNQL-----TITSQHQRHHRFCLRLLLKHPDSHALCVLCGHNAMVSGSFKHAL 767
Query: 666 RCYLEAYKLLPENPLINL 683
Y++A++ P+NPL +L
Sbjct: 768 GQYVQAFQTHPDNPLYSL 785
>gi|301121708|ref|XP_002908581.1| transcription factor, putative [Phytophthora infestans T30-4]
gi|262103612|gb|EEY61664.1| transcription factor, putative [Phytophthora infestans T30-4]
Length = 904
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 151/675 (22%), Positives = 290/675 (42%), Gaps = 97/675 (14%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
AI+LLK+ ++ +P +P+ Y+TLG+ + + A F++IA L+P+D+ LWK++ A
Sbjct: 103 AITLLKDFIKKAPTIPDPYHTLGMIYEDRQDRIKALQFFLIACTLTPQDAELWKRVGRIA 162
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
+ + QA++ ++A A+PKD A E GD +AAE ++++ L P+++
Sbjct: 163 KDEKNFDQALFCFKKASSADPKDKEALFSYAELCREQGDNRRAAEVFKKLTVLIPNDLSL 222
Query: 173 TKTGAQLFLKCGQTARSI----------GILEEYLKVHPSDADLSVIDLLVAILMENNAY 222
A+ + Q ++ L+ H S +L+ +++L + + Y
Sbjct: 223 WIQIAEAYHCNEQEDEAVEALKMCIEKAATLDPARNQHSSKYELNAVNMLADLYITLKRY 282
Query: 223 EKTLQHIEHAQIVRFSGKE-----------LPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
+ + I H R++ + LPL + VK GIC+L + A +F L
Sbjct: 283 REAIDVIHHLH-SRYASTQDPEQVEGDPGGLPLDIAVKYGICHLFERDFTTAMSMFTHLF 341
Query: 272 WKNAIDHADLITEVADTLMSLGHSN-SALKYYHFLETNAGTDNGYLYLKLAECYLSLKER 330
++ DL +VAD ++LG + A L +++K A C+ L
Sbjct: 342 AQDVEVFGDLYLDVADAYIALGDQDREAAAILQQLLGREEFPVEQIWIKFAACHDRLGIY 401
Query: 331 AHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEE--------EAITLLSP--PKDLDSL 380
A+ ++ KAL + D LT+ L+ +A + E I LL P+ +
Sbjct: 402 DVAVEYYEKALAHQRSSPD--LTVEPELMLQAMQATRKKNRPVEGIVLLKEYLPETM--- 456
Query: 381 DMNSDKSNPWWLN------EKIIMKLCHIYRAKGMPEDFVDAIFPLVCE----------- 423
P+W+N ++ + AKG + D + +
Sbjct: 457 ---CPPIRPYWINTSRKGKDRDSGSVLDEKEAKGDADSDADELEEEAEDEEDAEEQTRME 513
Query: 424 -----SLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCG-----IRPAAPKSEL 473
SL V+A+ +++K + G L++ + +LC I + ++
Sbjct: 514 MAHDPSLSVDAMENGIRLKLLIEYGHLKKLSG------EAEVLCQVGIPIILTSLSQTSF 567
Query: 474 LVAARARKKIQKKEALKEEKKALAKAAGV---EWHSDDTDDESQQEAF--------REPP 522
++ R + + + + + E A + V E+ D T D Q+E+F ++
Sbjct: 568 RLSGRVKNPLVEPQDVISESDAQSMGFQVLKSEYLVDIT-DARQRESFMGIVMRVAQQIV 626
Query: 523 LPNLLKNEENQCLIIDLCKALASLQRYEEASEI---INLSMRLAYNILPLEKKEELRSLG 579
+ L ++ L+ID+ + L L +Y A E+ +N S +++ L + ELR L
Sbjct: 627 ISRALGEQQYYNLVIDVAQTLTELGKYVAAIELLTDVNTSDKISKPTL----RFELRFLA 682
Query: 580 AKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRA 639
+A + + ++CA+ + P++L WN + +V++ I S H KF+ L
Sbjct: 683 LVIALEFKENRMAYECARLNIMEDPHNLGYWNLFSRVIA----ITGVFSWHQKFLAKLLR 738
Query: 640 KYKDCVPPIIISGHQ 654
+ P I+++GHQ
Sbjct: 739 DDPESYPAILLAGHQ 753
>gi|326922509|ref|XP_003207491.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Meleagris gallopavo]
Length = 880
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 198/428 (46%), Gaps = 57/428 (13%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 96 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAHEPFSTLAM 155
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P ++ W +L ++++ + QA++ +A++ +P ++
Sbjct: 156 IYEDQGDMEKSLQFELIAAHLNPSNTEEWVRLAEMSLEQDNIKQAIFCYAKALKYDPTNV 215
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++G+++ A + Y +I L P + + + A+ + + A +I
Sbjct: 216 RYLWERSSLYEQLGEHKLAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDAASAIE 275
Query: 192 ILEEYLKVHPS--------------------DADLSVIDLLVAILMENNAYEKT------ 225
I+EE H S D L+VI I++E A EK+
Sbjct: 276 IIEEAFNKHQSLVSMEDVNIAAELYISSKQYDKALAVITDYAGIVLERKASEKSPAEEKK 335
Query: 226 -----LQHIEHAQ--IVRFSG-------------------KELPLKLKVKAGICYLRLGN 259
+ E +Q + G + +P+ + VK +C + L
Sbjct: 336 DDAAAVVETEQSQEAVTDNQGDPAAESSAAAVEKVSCCIPEGVPIDITVKLMVCLVHLNI 395
Query: 260 MEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLK 319
+E L L +N + DL +VA+ + +G NSAL L + + ++L+
Sbjct: 396 LEPLSPLLTTLVEQNPEEMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLR 455
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDS 379
AEC +L A + K +D ++DAR++L++L + + E+A+ L D D+
Sbjct: 456 HAECLKALGHMERAAESYAKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEQMYDPDT 515
Query: 380 LDMNSDKS 387
L +++ +
Sbjct: 516 LAQDANAA 523
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 523 LPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKM 582
L ++L ++ L++ +L L RY+EA +++ S+ +K++EL G
Sbjct: 610 LTSVLTKDDWWNLLLKAIYSLCDLSRYKEAELLVDSSLEYYSFYDDRQKRKELEYFGLSA 669
Query: 583 AYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYK 642
A + ++ + ++ + WN + +V + S+ +H +F L K
Sbjct: 670 AILDKNFRKAYNYIRIMVMENVNKPQLWNIFNQV-----TMQSQDVRHHRFCLRLMLKNP 724
Query: 643 DCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
D +++GH ++ + A Y++A++ P+ PL +L
Sbjct: 725 DNHALCVLNGHNAFVSGSFKHALGQYVQAFRANPDEPLYSL 765
>gi|167540105|ref|XP_001741554.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165893862|gb|EDR21981.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 858
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 157/316 (49%), Gaps = 5/316 (1%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
KL V K++GEAS+ Y + QA E ++++P +P++Y+TLG+ ++ LG+ K+A
Sbjct: 53 KLPDAVKKLIGEASMCYVKKEYSQATEYALEAIKIAPQIPDSYHTLGMIYTDLGDTKTAR 112
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
++++IAAH++ D+ LWK+L + GD Q Y + QA+ + K++ L +
Sbjct: 113 EYFMIAAHITRTDAELWKRLADMFKEDGDMEQYYYCLSQAVLHDSKNVELLCERIEIGKK 172
Query: 149 IGDYEKAAESYEQIQKLFPD-NVDATKTGAQLFLKCGQTARSI--GILEEYLKVHPSDAD 205
+ D +++ + L N A + K + A S+ G +++ +K + S D
Sbjct: 173 MEDSRGVLMTFQYLISLDGSPNTAKQIVSALISEKRMKDASSVVLGAIKQRMKENKS-ID 231
Query: 206 LSVIDLLVAILMENNAYEKTLQHI-EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAE 264
L + ++ + +L+ N E + I E+ + + + +P+ +KV IC +RLG E+++
Sbjct: 232 LGLANVCMELLLGINKLETFQEFIKEYFKFAGINEENIPIDMKVNCCICNIRLGQKEESQ 291
Query: 265 ILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECY 324
+ I++ DL +A+ LM + AL+ + + G DN A C
Sbjct: 292 KCIEMMIHSTTIENVDLTIYIANELMKVKEYERALELFEVIRKVNGQDNAMNLGNCAICS 351
Query: 325 LSLKERAHAIMFFYKA 340
+L ++ I KA
Sbjct: 352 FNLGKKEIGIKLAEKA 367
>gi|57529778|ref|NP_001006515.1| general transcription factor 3C polypeptide 3 [Gallus gallus]
gi|53128395|emb|CAG31298.1| hypothetical protein RCJMB04_4n14 [Gallus gallus]
Length = 910
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 197/428 (46%), Gaps = 57/428 (13%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 126 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAHEPFSTLAM 185
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P ++ W +L ++++ + QA++ +A++ +P ++
Sbjct: 186 IYEDQGDMEKSLQFELIAAHLNPSNTEEWVRLAEMSLEQDNIKQAIFCYAKALKYDPTNV 245
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++G+++ A + Y +I L + + + A+ + + A +I
Sbjct: 246 RYLWERSSLYEQLGEHKLAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDAASAIE 305
Query: 192 ILEEYLKVHPS--------------------DADLSVIDLLVAILMENNAYEKT------ 225
I+EE H S D L+VI I++E A EK+
Sbjct: 306 IIEEAFTKHQSLVSMEDVNIAAELYISSKQYDKALAVITDYAGIVLERKASEKSPAEEKK 365
Query: 226 ------LQHIEHAQIVRFSGKE--------------------LPLKLKVKAGICYLRLGN 259
++ E + V + + +P+ + VK +C + L
Sbjct: 366 DDAAAVVETQESREAVTDNQSDPVAESSAAAVEKVSCCIPEGVPIDITVKLMVCLVHLNI 425
Query: 260 MEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLK 319
+E L L +N + DL +VA+ + +G NSAL L + + ++L+
Sbjct: 426 LEPLNPLLTTLVEQNPEEMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLR 485
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDS 379
AEC +L A + K +D ++DAR++L++L + + E+A+ L D D+
Sbjct: 486 HAECLKALGHMERAAESYTKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEQMYDPDT 545
Query: 380 LDMNSDKS 387
L +++ +
Sbjct: 546 LAQDANAA 553
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 523 LPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKM 582
L ++L ++ L++ +L L RY+EA +++ S+ +K++EL G
Sbjct: 640 LTSVLTKDDWWNLLLKAIYSLCDLSRYKEAELLVDSSLEYYSFYDDRQKRKELEYFGLSA 699
Query: 583 AYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYK 642
A + ++ + ++ + WN + +V + S+ +H +F L K
Sbjct: 700 AILDKNFRKAYNYIRIMVMENVNKPQLWNIFNQV-----TMQSQDVRHHRFCLRLMLKNP 754
Query: 643 DCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
D +++GH ++ + A Y++A++ P+ PL +L
Sbjct: 755 DNHALCVLNGHNAFVSGSFKHALGQYVQAFRANPDEPLYSL 795
>gi|6808030|emb|CAB70745.1| hypothetical protein [Homo sapiens]
Length = 719
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 169/362 (46%), Gaps = 27/362 (7%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
AI + E++R +P E ++TL + + G+ + + F +IAAHL+P D+ W +L +
Sbjct: 1 AILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMS 60
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN--- 169
+++ + QA++ +A++ EP ++ +S Y ++GD++ A + Y +I L +
Sbjct: 61 LEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGE 120
Query: 170 --VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ + A+ + + +I I++E H + +++ + + N Y+K L+
Sbjct: 121 RFMQLARDMAKSYYEANDVTSAINIIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALE 180
Query: 228 HIEHAQIVRFSGKE----------------------LPLKLKVKAGICYLRLGNMEKAEI 265
I + K +P+ + VK +C + L +E
Sbjct: 181 IITDFSGIVLEKKTSEEGTSEENKAPENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNP 240
Query: 266 LFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYL 325
L L +N D DL +VA+ + +G NSAL L + + ++L+ AEC
Sbjct: 241 LLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLK 300
Query: 326 SLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
+L A + K +D ++DAR++L++L + + E+A+ L P D D+L +++
Sbjct: 301 ALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDAN 360
Query: 386 KS 387
+
Sbjct: 361 AA 362
>gi|224055499|ref|XP_002189275.1| PREDICTED: general transcription factor 3C polypeptide 3
[Taeniopygia guttata]
Length = 934
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 191/425 (44%), Gaps = 56/425 (13%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 151 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAHEPFSTLAM 210
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P ++ W +L ++++ + QA++ +A++ +P ++
Sbjct: 211 IYEDQGDMEKSLQFGLIAAHLNPSNTEEWVRLAEMSLEQDNIKQAVFCYTKALKYDPSNM 270
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++G+ + A + Y +I L P + + + A+ + + + +I
Sbjct: 271 RYLWERSSLYEQLGEQKMAMDGYRRILNLLAPSDGERFMQLARDMAKSYYEASDVSSAIE 330
Query: 192 ILEEYLKVHPS--------------------DADLSVIDLLVAILMENNAYEKTLQHIEH 231
I+ E H + D L+VI I++E E++ +
Sbjct: 331 IVVEAFAKHQNLVSMEDVNIAAELYIFSKQYDKALAVITDFTGIVLEKKVPERSATEEKK 390
Query: 232 AQIVRFSGKE-------------------------------LPLKLKVKAGICYLRLGNM 260
+E +P+ + VK +C + L +
Sbjct: 391 DTGAAVETQESQEAVTDNQSHSVAESSAPAVEKVTCCIPEGVPIDITVKLMVCLIHLNIL 450
Query: 261 EKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKL 320
E L L +N D DL +VA+ + +G NSAL L + + ++L+
Sbjct: 451 EPLSPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSSLVCSERYNLAVVWLRH 510
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSL 380
AEC +L A + K +D ++DAR++L++L + + E+A+ L P D D+L
Sbjct: 511 AECLKALGHMERAAESYAKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTL 570
Query: 381 DMNSD 385
+++
Sbjct: 571 AQDAN 575
>gi|168278431|dbj|BAG11095.1| general transcription factor 3C polypeptide 3 [synthetic construct]
Length = 857
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 178/396 (44%), Gaps = 56/396 (14%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 132 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 191
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 192 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 251
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L P + + + A+ + + +I
Sbjct: 252 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAIN 311
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE---------- 241
I++E H + +++ + + N Y+K L+ I + K
Sbjct: 312 IIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENK 371
Query: 242 ------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
+P+ + VK +C + L +E L L +N D DL +VA+
Sbjct: 372 APENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAF 431
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ + EC +L A + K +D ++D
Sbjct: 432 LDV-----------------------------ECLKALGYMERAAESYGKVVDLAPLHLD 462
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSD 385
AR++L++L + + E+A+ L P D D+L +++
Sbjct: 463 ARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDAN 498
>gi|384499466|gb|EIE89957.1| hypothetical protein RO3G_14668 [Rhizopus delemar RA 99-880]
Length = 1065
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 49/369 (13%)
Query: 21 GR-RKGSKNKLSPG-------VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYN 72
GR +KG K +L+ G V + LGEA+ Y ++ AI++L+ V+ PN +N
Sbjct: 130 GRLKKGVKKRLTSGEIRLPEDVKRKLGEANALYVARDYGNAIAMLQGVITDHPNAYPAWN 189
Query: 73 TLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE 132
TLGL H LGN + ++AAHL D +LWK+L +++ QA+Y + +A+ +
Sbjct: 190 TLGLIHDELGNKDKSLQMRMVAAHLC-LDPSLWKELAQKSIENNAPKQAIYCLSKALAID 248
Query: 133 PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
P D+ + Y + G +A E + +I + P + AQL+ G+T +I +
Sbjct: 249 PADVDALWDRSFLYKQAGKNAEAVEGFNKILYMMPHHFKVINELAQLYRAEGKTKEAIKM 308
Query: 193 LEEYLKVHPSDAD-----------------LSVIDLLVAILMENNAYEKTLQHI------ 229
EE + H +A+ S I++L + + N Y + L I
Sbjct: 309 YEEAIVYHTENAEPTEEDDEEEEEFKDKLGYSEINMLSELYLILNDYARCLDTIKTGLRL 368
Query: 230 -EHAQ----------------IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQW 272
+H Q + E P++L+V+ GIC + LG ++ A F L
Sbjct: 369 VQHRQDETWWVDHIDDDDEYFEEDEARVEFPIELRVRMGICRVYLGQVQIATKHFGYLLQ 428
Query: 273 KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAH 332
+ DL ++A H + ALK + + + L ++ A+CY + +
Sbjct: 429 YPPTTYPDLHQDIAYAYYDRRHYDLALKVFQKIIDASDEIEVDLLIRTADCYREVGDLDT 488
Query: 333 AIMFFYKAL 341
A++F+ +
Sbjct: 489 AVIFYVNGM 497
>gi|407042642|gb|EKE41451.1| tetratricopeptide repeat-containing protein [Entamoeba nuttalli
P19]
Length = 863
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 155/316 (49%), Gaps = 5/316 (1%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
KL V K++GEAS+ Y + QA E ++++P +P++Y+TLG+ + LG+ K+A
Sbjct: 53 KLPDAVKKLIGEASMCYVKKEYSQATEYALEAIKIAPQIPDSYHTLGMIYLDLGDTKTAR 112
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
++++IAAH+ D+ LWK+L + GD Q Y + QA+ + K++ L +
Sbjct: 113 EYFMIAAHMKRTDAELWKRLADMFKEDGDMEQYYYCLSQAVLHDSKNVELLCERIEIGKK 172
Query: 149 IGDYEKAAESYEQIQKLFPD-NVDATKTGAQLFLKCGQTARSI--GILEEYLKVHPSDAD 205
+ D +++ + L N A + K + A S+ G +++ +K + S D
Sbjct: 173 MEDSRGVLMTFQYLISLDGSPNTAKQIVSALISEKRMKDASSVVLGAIKQRMKENKS-ID 231
Query: 206 LSVIDLLVAILMENNAYEKTLQHI-EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAE 264
L + ++ + +L+ N E + + E+ + + + +P+ +KV +C +RLG E+++
Sbjct: 232 LGLANVCMELLLGINKLETFQEFVKEYFKFAGINDENIPIDMKVNCCLCNIRLGQKEESQ 291
Query: 265 ILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECY 324
+ ++ DL +A+ LM + AL+ + + G DN + A C
Sbjct: 292 KCIEMMIQSTTAENVDLSLYIANELMKVKEYERALELFEVIRKVDGQDNAMNWGNCAICL 351
Query: 325 LSLKERAHAIMFFYKA 340
+L ++ I KA
Sbjct: 352 FNLGKKEIGIELAEKA 367
>gi|67476410|ref|XP_653808.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56470798|gb|EAL48422.1| hypothetical protein, conserved domain containing [Entamoeba
histolytica HM-1:IMSS]
gi|449701704|gb|EMD42471.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
KU27]
Length = 863
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 155/316 (49%), Gaps = 5/316 (1%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
KL V K++GEAS+ Y + QA E ++++P +P++Y+TLG+ + LG+ K+A
Sbjct: 53 KLPDAVKKLIGEASMCYVKKEYSQATEYALEAIKIAPQIPDSYHTLGMIYLDLGDTKTAR 112
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
++++IAAH+ D+ LWK+L + GD Q Y + QA+ + K++ L +
Sbjct: 113 EYFMIAAHMKRTDAELWKRLADMFKEDGDMEQYYYCLSQAVLHDSKNVELLCERIEIGKK 172
Query: 149 IGDYEKAAESYEQIQKLFPD-NVDATKTGAQLFLKCGQTARSI--GILEEYLKVHPSDAD 205
+ D +++ + L N A + K + A S+ G +++ +K + S D
Sbjct: 173 MEDSRGVLMTFQYLISLDGSPNTAKQIVSALISEKRMKDASSVVLGAIKQRMKENKS-ID 231
Query: 206 LSVIDLLVAILMENNAYEKTLQHI-EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAE 264
L + ++ + +L+ N E + + E+ + + + +P+ +KV +C +RLG E+++
Sbjct: 232 LGLANVCMELLLGINKLETFQEFVKEYFKFAGINDENIPIDMKVNCCLCNIRLGQKEESQ 291
Query: 265 ILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECY 324
+ ++ DL +A+ LM + AL+ + + G DN + A C
Sbjct: 292 KCIEMMIQSTTAENVDLSLYIANELMKVKEYERALELFEVIRKVDGQDNAMNWGNCAICL 351
Query: 325 LSLKERAHAIMFFYKA 340
+L ++ I KA
Sbjct: 352 FNLGKKEIGIELAEKA 367
>gi|224107048|ref|XP_002333575.1| predicted protein [Populus trichocarpa]
gi|222837226|gb|EEE75605.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 71/89 (79%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
GSKNKLSP +T+MLG+A+L YA+GN+E+A+++L EVV+ +P + ++Y+TLGL H ALGN
Sbjct: 132 GSKNKLSPEITRMLGDATLHYAHGNYEEALTVLSEVVKRAPLVADSYHTLGLVHKALGNT 191
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
+ A FY IAA L PKDS+LWK L ++ V
Sbjct: 192 EKAMKFYRIAAFLRPKDSSLWKLLFSWHV 220
>gi|145346134|ref|XP_001417548.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577775|gb|ABO95841.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 689
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 150/664 (22%), Positives = 272/664 (40%), Gaps = 104/664 (15%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+ +A++ YA G + +A+S L + P+ E Y L L + + + A D Y +A +
Sbjct: 1 MSDATILYARGEYAEAVSKLHAAIVKIPHSSEPYEQLALVYEETNDLEKALDSYSLATAV 60
Query: 98 SPK-DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
D ++W ++ + AV + A++ + +A R++P + ++ A+ Y E+GD +KA
Sbjct: 61 KRGVDPSMWYRMASLAVNVNNKDYAIHCLAKAARSDPHNYENKMDQATLYSELGDAKKAI 120
Query: 157 ESYEQIQK--LFP-DNV---DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
E E + K L P D DA A+L+ ++ LE LK +P D +V++
Sbjct: 121 EQLEWVLKDDLPPLDGAILRDAVVLLAKLYYSADMRDKAEHALEHMLKAYPQHIDATVVN 180
Query: 211 LLVAILMENNAYEKTLQHIEHAQ---IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
+L+ + +E Y + L+ +E ++ + +LPL + VK G C L G E+
Sbjct: 181 ILIELKIEFRKYSEVLEIVERSRANILEHVDSGQLPLDISVKQGQCLLYEGQTEEGMERI 240
Query: 268 ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSL 327
+L + DL + TLM +G ++ A + + L DN ++ ++ C +
Sbjct: 241 EELLRHKVTEFDDLYFDCGKTLMEVGLASKAEEVFMHLIALDEYDNVDMWQRVERC-VQQ 299
Query: 328 KERAHAIMFFYKAL-DRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDK 386
A++ FY L D+ ++ ++LA L +EE++
Sbjct: 300 SRGLRAVVEFYDMLHDKHPSDVFIAVSLADSLSRFQDDEESLR----------------- 342
Query: 387 SNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQ 446
RA+ + + D V+V++ GIL
Sbjct: 343 ------------------RARSLVSNLDD------------------VEVQK---YGILL 363
Query: 447 QRTKIYNNLPTDSILCGIRPAAPK-SELLVAARARKKIQKKEALKEEKKALAKAAGVEWH 505
+ T + L +++ L I PAA K E L R+++K+Q+ G +
Sbjct: 364 RVTALQRKLLSEAELTVIIPAALKLLEDLSEKRSQRKLQR------------AGQGSDDF 411
Query: 506 SDDTDDESQQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRL-AY 564
DD S + F II + L R+EEA I+N ++ A
Sbjct: 412 VDDNVRISDDDVFAN---------------IISGAEVAIRLGRHEEAGTIVNHALSFSAG 456
Query: 565 NILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKIN 624
++L E+ LR L + +AY D + +L++ P S++ WN + +
Sbjct: 457 SVLTREQTASLRYLKSLVAYMMGDLQESAASCRSVLEVFPNSVTVWNMLMHMAIDYPRAL 516
Query: 625 SKHSKHSKFIRYLRAKYKDCVP-----PIIISGHQFTMASHHQDAARCYLEAYKLLPENP 679
S + SK + L A D P++ SG+ T A +L A + P +
Sbjct: 517 SVGT--SKLAKRLVASSLDDASRERLLPLMASGYVHTWNKKWSIAMHDFLTALTIAPNDH 574
Query: 680 LINL 683
+NL
Sbjct: 575 EVNL 578
>gi|430814507|emb|CCJ28268.1| unnamed protein product [Pneumocystis jirovecii]
Length = 621
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 188/413 (45%), Gaps = 54/413 (13%)
Query: 8 GYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNL 67
G+R R + +GRR + + S V +LG A+ +A G+F +A+ L+E++R+ N+
Sbjct: 100 GFR---RNKGRSKGRRCVADMEPSEEVKCLLGYANQAFASGDFSEALKTLQEIIRIDSNV 156
Query: 68 PETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTA---QAMYY 124
+ TLG H GN ++ AAHL PKD+ LW LT A D+ QA Y
Sbjct: 157 FAAWQTLGEVHRERGNIDKCLGSWISAAHLKPKDADLW---LTCAKLSQDSKLWDQADYC 213
Query: 125 IRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCG 184
+AI A P D+ A + G +KA + ++ + + P+++ + A+L+L+
Sbjct: 214 YNRAIHARPFDVDAIWDRAILARDRGRMKKAIDCFKSLLNIVPNDMTVVRQLARLYLQTS 273
Query: 185 QTARSIGILEEYLKVH-----PSDA----DLSVIDLLVAILMENNAYEKTLQHIEHAQ-- 233
Q + I + E+ ++ + P + + S + ++ + + + +++ + +I++
Sbjct: 274 QVSEGIALYEKVVEYYLCFQKPPEGHCGLNWSELHIMSELYIADKRWKQCIYNIKYIGRW 333
Query: 234 ----------------------------IVRF-----SGKELPLKLKVKAGICYLRLGNM 260
++ F + E+PL+L+VK GIC L +G+
Sbjct: 334 LCGRKSEEFWDDCPDDREWDSDNERRNLVLHFLDGDKTRYEMPLELRVKLGICRLHIGDT 393
Query: 261 EKAEILFADLQWK-NAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLK 319
++A F L N + DLI + A+ L + AL+ Y L + L+
Sbjct: 394 DEALRHFEVLDENPNVEKNIDLIFDAANALSEKKIYDEALRLYSRLTECDSANGPDLWFS 453
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
+ +CY ++ + A F + E +I++ + LA + + EEA+ +++
Sbjct: 454 MGKCYKAVDDLEAAEECFKGIVANNEKHIESLIQLADIYQITGRREEALDVVN 506
>gi|405952760|gb|EKC20534.1| General transcription factor 3C polypeptide 3 [Crassostrea gigas]
Length = 799
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 196/415 (47%), Gaps = 47/415 (11%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++GEA++++A G+ E+AIS+ ++++++P + TLGL + G+ K + + +I+A+
Sbjct: 167 LMGEANIKFAQGDHEKAISICMDIIKMAPEAYMPFQTLGLIYEDQGDLKKSLQYSLISAY 226
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE---PKDISLRIHLASFYVEIGDYE 153
L+P D W +L + GD QA +A+RAE P+++ L + Y E+G+ +
Sbjct: 227 LNPVDRNSWIRLAELCQELGDKQQATLCYTKALRAEPQNPQNLDLFWSRSHLYEELGEKK 286
Query: 154 KAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
KA E Y+ + ++ P ++ +T + + + ++ + + + +
Sbjct: 287 KALEGYKSMLRITPSQDGERYMEIARTITKHYYEEDDKVSAMETMRNAFEANSENVTAED 346
Query: 209 IDLLVAILMENNAYEKTLQH-IEHAQI-------------------------VRFSG--- 239
++L + +LM + + ++ + H + V+ S
Sbjct: 347 VNLFMELLMTQRQFLQAIEVLVNHCGVVFQLNVNREWSKAVPIGISLIENGAVKISSVAI 406
Query: 240 -KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSA 298
+ LP+ L+VK GIC ++ A+++ L ++ D DL +VA+ M A
Sbjct: 407 PEILPIDLRVKLGICLIQNKLFTIAQVVINQLFQESVEDVGDLYLDVAEAYMDQRCFVDA 466
Query: 299 LKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
L + + ++L+LAEC SL E A+ + + ++ +I+AR++L++L
Sbjct: 467 KPILKKLVNSENYNLAAVWLRLAECLNSLGEVERAVDAYSRVVEMAPSHIEARMSLSTLQ 526
Query: 359 LEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDF 413
+ K EEA+ LS + D L +K+ ++++ C ++ A G ++F
Sbjct: 527 SQLGKHEEALKALSRDES-DGLLTKEEKT--------LLLQRCMLFYAHGRLDEF 572
>gi|428171827|gb|EKX40741.1| hypothetical protein GUITHDRAFT_142603 [Guillardia theta CCMP2712]
Length = 506
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 24/297 (8%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
R GS+ + V LG+A+++YA+G FE AI L KE++R+ P+ + + LG + A
Sbjct: 144 RGGSR--MPQEVKDKLGQATMKYAFGEFEAAIELSKEIIRILPH-SDVFALLGSIYEAKN 200
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
SA VIAA L+PKD +LW + + + G+ QA+Y + +AI+A+P L
Sbjct: 201 ELSSALSCIVIAALLNPKDISLWNRAASMSRDLGNIPQAIYALNRAIKADPAP-ELLWDK 259
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYL 197
AS VE+G ++A + + K P + +K ++L + G + ++ +LE +L
Sbjct: 260 ASLLVEVGQTKRAIDVLHTLLKKLPAEEYVKISEVSKELSRLLHQYGDSQAAVKVLESWL 319
Query: 198 KVH-----PSDA-------DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLK 245
+ P D +L +++L + EK L+ + + + +G ++P+
Sbjct: 320 DIREKRRMPDDRPRTFMEFELDCVNMLTECFLMLKQSEKALKLLGKVRSYQPNG-DMPVD 378
Query: 246 LKVKAGICYLRLGNMEKAEILFADLQWKNAIDH-ADLITEVADTLMSLGHSNSALKY 301
L V+ GI L+LG + AE F L W +ID DL +VA++ G ++S + +
Sbjct: 379 LVVREGIALLQLGRVRMAEECFQTL-WAYSIDACGDLYLDVAESYRQAGMTSSEMHH 434
>gi|308803138|ref|XP_003078882.1| RNA polymerase III transcription factor TFIIIC (ISS) [Ostreococcus
tauri]
gi|116057335|emb|CAL51762.1| RNA polymerase III transcription factor TFIIIC (ISS) [Ostreococcus
tauri]
Length = 828
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 167/347 (48%), Gaps = 18/347 (5%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
K+K +++ +A++ YA G + A+ L + +PN E Y L L + + + +
Sbjct: 123 GKSKPMNEANELISDATILYARGAYADAVIKLHAAIVKAPNASEPYEQLALVYEEMEDLE 182
Query: 86 SAFDFYVIAAHLSPK-DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
A D Y IA L D ++W ++ T AV A++ + +A R++P++ ++ A+
Sbjct: 183 KALDCYSIATVLKRGVDPSMWYRMATLAVNVNKKEYALHCLARAARSDPRNYENKMDQAT 242
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNV---------DATKTGAQLFLKCGQTARSIGILEE 195
Y E+GD +KA EQ++ + D++ DAT A+L+ ++ LE
Sbjct: 243 LYSELGDTKKA---IEQLEWVLRDDLPPLDGAILRDATVFLAKLYYGAESREKAEYALER 299
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE--HAQIVR-FSGKELPLKLKVKAGI 252
L+ HP D +V+++L+ + +E Y + L ++ HA IV ELPL + VK G
Sbjct: 300 LLERHPQHVDATVVNILIELKIEFRKYSEVLDIVKKAHATIVEHMDNGELPLDISVKLGQ 359
Query: 253 CYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
C L G +E +L + DL + +TLM +G + A + + L + D
Sbjct: 360 CQLYEGQIEDGLRRVDELLAHQVTEFDDLFFDCGNTLMDVGLALKAEEVFRPLLSLEAYD 419
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKAL-DRFEDNIDARLTLASLL 358
N L+ ++ C + + A++ FY ++ D+ ++ ++LA L
Sbjct: 420 NVELWQRIERC-IEQSQGLFAVIEFYDSMHDKHPSDVFIAVSLADAL 465
>gi|242024304|ref|XP_002432568.1| General transcription factor 3C polypeptide, putative [Pediculus
humanus corporis]
gi|212518028|gb|EEB19830.1| General transcription factor 3C polypeptide, putative [Pediculus
humanus corporis]
Length = 827
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 149/668 (22%), Positives = 280/668 (41%), Gaps = 132/668 (19%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
KK ++ +K R + S L P + ++G+A++ + G+ E A+ + E++R P+ PE
Sbjct: 84 KKKYEIQEKVKRVRKS---LPPALEGLMGQANMCFVKGDHESALQMCLEIIRQVPSAPEP 140
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
+ TL + G + + +IAAHL+P+D W L ++Q + + A+ +AI+
Sbjct: 141 FQTLAEIYEEKGLKEKSLQVAMIAAHLNPRDCEQWINLGERSLQLNNLSDAITCYSRAIK 200
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA---------TKTGAQLFL 181
+P +I+ I + GD + A +SY ++ D+V A K A+ +
Sbjct: 201 YDPGNINPHIIRCQLLEQKGDRKSAIKSYHKL----VDSVKAEFGSLILEYAKIAARYYH 256
Query: 182 KCGQTARSIGILEE-YLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGK 240
+ ++ ++E +LKV P+ ++L V +LM Y K L+ I V+ G+
Sbjct: 257 EENDIPKAKEVMETAFLKV-PNSVSSEDVNLYVELLMMVRDYMKALEIIAKYCDVKIEGE 315
Query: 241 --------------------------ELPLKLKVKAGICYLRLGNMEKAEILFAD-LQWK 273
E+P+++ VK + + L + + L A L+ +
Sbjct: 316 EDIVADDETNQIACSSFRVLSCDIPTEIPVQIHVKLIVILIHLKSCHLLDNLLAPFLELE 375
Query: 274 NAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
N DL +V + LMS G ALK L + ++L AEC L A
Sbjct: 376 NVEQSGDLYIDVVEALMSEGMHIEALKLLKLLTESKNYSLPAVWLNYAECLKHLGRLEEA 435
Query: 334 IMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLN 393
+ + + + +++ARL ++ LL E + +EAI++L+ + SLD
Sbjct: 436 VSAYLMVMQQAPKHVEARLMVSQLLNELGRSDEAISVLTQDPEAGSLDTG---------- 485
Query: 394 EKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYN 453
++ + C + D A+ L+ CV ++TK
Sbjct: 486 --LLYERCLLLNGYSERTDEFLAVGRLLLSRHCV-----------KITK----------- 521
Query: 454 NLPTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDES 513
K +L++ ++ + +K+EA+K A+ K G E
Sbjct: 522 ----------------KDDLMLLSKLKGYAKKQEAMKRSNDAV-KVEGPEL--------- 555
Query: 514 QQEAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNIL--PL-- 569
E R P ++E + + LCK +++ L RL ++ L P+
Sbjct: 556 -VEGKRLPT------SDEEWTIFLSLCKTAYETKQFA-------LLQRLTFSALGSPVLN 601
Query: 570 --EKKE-ELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSK 626
EKKE ++ L + + D HG++ ++ I+ L+ S AWN + +L ++++
Sbjct: 602 SNEKKESDVFFLALLSCFYNKDSFHGYNFSRDII-LNNGSTKAWNLFNLML-----LDAE 655
Query: 627 HSKHSKFI 634
S+H +FI
Sbjct: 656 DSRHYRFI 663
>gi|440295041|gb|ELP87970.1| O-linked N-acetylglucosamine transferase, ogt, putative [Entamoeba
invadens IP1]
Length = 855
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 154/313 (49%), Gaps = 9/313 (2%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
K+ V K++GEAS+ Y + QA E ++++P +P++Y+TLG+ +S LG+ K+A
Sbjct: 42 KIPDSVKKLIGEASMCYVKKEYSQATEYALEAIKVAPQIPDSYHTLGMIYSDLGDKKTAR 101
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
D+++IAAH++ D LWK+L + GD Q Y + +A+ +PK++ L +
Sbjct: 102 DYFMIAAHMTRTDGELWKRLADMFKEDGDEEQYYYCLSKAVLHDPKNVDLLYERVKVGTQ 161
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL-KCGQTARSI--GILEEYLKVHPSDAD 205
+ D +++ + L A + L K + A S+ G +++ +K D +
Sbjct: 162 MSDSRGVLSTFQALIALDGTATTAKQIATALITEKRKKEAASVVLGGVKQRIK-ENKDVE 220
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRL-GNMEKAE 264
LS+ ++L+ +L++N ++ + + V+ + E + ++A +C + E+
Sbjct: 221 LSLGNILMELLLDNEMLDEFSEF--YTNYVK-THDESTFPVDMQANVCIFNIRKKSEETW 277
Query: 265 ILFADLQWKNAIDH-ADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAEC 323
+ + KN + DL +A+ LM A++ Y + + G DN ++ LA C
Sbjct: 278 MPYYLYHLKNINPNIVDLSVLIANELMKKKEYQKAMELYEKIRSFEGMDNAVIWGNLAVC 337
Query: 324 YLSLKERAHAIMF 336
Y +L A +
Sbjct: 338 YWNLGNEPLAFQY 350
>gi|156553476|ref|XP_001600117.1| PREDICTED: general transcription factor 3C polypeptide 3-like
isoform 1 [Nasonia vitripennis]
Length = 894
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 170/381 (44%), Gaps = 30/381 (7%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
L + ++GEA+L+YA G E A + E++R PN PE ++TL + + KS
Sbjct: 170 LPAALQGLMGEANLRYARGEIELATQMCYEIIRQVPNAPEPFHTLAMIYENDQPDKS-LQ 228
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
F +IAAHLSP+DS W +L +++ G+ QA+ +AI+A PKDI L A E
Sbjct: 229 FALIAAHLSPRDSDQWVRLANSSLESGNLRQALTCYSKAIQASPKDIELYEIRAKLQDEN 288
Query: 150 GDYEKAAESYEQ-IQKLFP-DNVDATKTGAQLFLKCGQT---ARSIGILEEYLKVHPSDA 204
GD + +Y + + L P D ++ K L +C Q ++ ++ K P
Sbjct: 289 GDRKAYIRAYSKLVHNLGPEDGLNIIKYAKLLATRCMQDNMYETALDGMDNIFKKCPQLV 348
Query: 205 DLSVIDLLVAILMENNAYEKTLQHI-EHAQI---------------VRFSG-------KE 241
L ++++ +L+ + + L+ + H I + +G +
Sbjct: 349 TLEEVNIMTELLIVLKQFPRCLEILTRHTNIWIEYLPIGDSQETDKTKGNGIALCNIPDD 408
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQ-WKNAIDHADLITEVADTLMSLGHSNSALK 300
L + LK K I + L + A+ L Q +N DL +VA+ M H A+K
Sbjct: 409 LAVDLKAKCIISLIELNEISIADTLVPKFQSLENPEVSGDLFLDVAEAFMGKKHYERAMK 468
Query: 301 YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
L + ++L+ AEC + E + AI + ++ AR+ LA L
Sbjct: 469 LLEPLVNSENFSLAAVWLRHAECLVGCNEISKAIKSYEVVRKLSPQHLGARMELAKLYRL 528
Query: 361 EAKEEEAITLLSPPKDLDSLD 381
+++ +AI +L + D LD
Sbjct: 529 KSQFSKAIQVLKQDPETDILD 549
>gi|383852752|ref|XP_003701889.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Megachile rotundata]
Length = 876
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 175/392 (44%), Gaps = 33/392 (8%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS--PNLPETYNTLGLAHS 79
R K K L P + ++GEA+L++A G+ E A + E++R P+ PE ++TL + +
Sbjct: 141 RYKRKKRTLPPVLQGLMGEANLRFARGDTELAAQICMEIIRQVQVPSAPEPFHTLAMIYE 200
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
KS +IAAHLSPKD+ W +L +++ GD QA+ +AI+A PKDISL
Sbjct: 201 TDQPEKS-LQCALIAAHLSPKDADQWVRLANMSLESGDIKQAITCYNKAIQANPKDISLY 259
Query: 140 IHLASFYVEIGDYEKAAESYEQ-IQKLFPD---------------------NVDATKTGA 177
A + GD + + + + + +L P+ N A +
Sbjct: 260 ETRAELLEKNGDKKAYLKGFSKLVHQLEPEDGEHIIKYAKMLAKRHMEENNNEQALEAME 319
Query: 178 QLFLKCGQ--TARSIGILEEYL-KVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQI 234
+FLKC T + I+ E L + L+++ +I ++ + + + +E I
Sbjct: 320 NIFLKCPSFITLEEVNIMTEILIALKKFKRCLNILTTYTSIWVKRKSGNEKNEELEDQDI 379
Query: 235 VRFSGKELP----LKLKVKAGICYLRLGNMEKAEILFADLQ-WKNAIDHADLITEVADTL 289
+P + LK K I + L M++AE L ++N DL ++A+ L
Sbjct: 380 CEIEACGIPDDVVVDLKAKFLITLIELDQMKQAETLLPKFYLYENPEISGDLFLDIAEAL 439
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
M AL L + ++L+ AEC++ K+ AI + ++
Sbjct: 440 MGKKEFERALMLLDPLVNSNNYSLAAVWLRHAECWVGCKDLKKAIKSYENVRKLSPQHLG 499
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
AR LA L + + +AI +L + D+LD
Sbjct: 500 ARTALAKLYQLKGQYNKAIEILHQDPESDTLD 531
>gi|357609382|gb|EHJ66418.1| putative DNA ligase IV [Danaus plexippus]
Length = 1298
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 171/392 (43%), Gaps = 41/392 (10%)
Query: 19 KRGRRKGSK-NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
KRG ++ SK +L P ++ ++GEA+++ A G+ E A + E+++ P E Y TL
Sbjct: 55 KRGLKRQSKFRRLFPALSGLMGEANIRLARGDSEMAERMCHEIIKQQPTAAEPYQTLAQI 114
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
+ N + F ++AAHLS D + W +L Q+ D Q M QAI++EP+++
Sbjct: 115 YEHDPN--KSLQFSLLAAHLSFTDKSEWWRLAALCRQRSDYKQEMVCYTQAIKSEPQNLE 172
Query: 138 LRIHLA----------SFYVEIGDYEKAAESYEQIQKLFPDNVDA----TKTGAQLFLKC 183
+ F V K ++ ++ L P + + K A L+
Sbjct: 173 THLKRLELLSELEKLPDFPVNSLKVSKVKCYHKIVRSLGPSDAETIMKYAKMAATLYHNS 232
Query: 184 GQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ--------HIE-HAQI 234
+ +++ ++ K S L I++ + +L+ + K ++ IE Q
Sbjct: 233 TEVEQAVEVMGIAYKKCFSLFTLEDINMYLELLITQKQFTKCIEVFVSSIGVEIEAEIQT 292
Query: 235 VRFSGKE---------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHA 279
V+ + + L + LK K +C++ LG + + L D +
Sbjct: 293 VKNANGDIEEQTHYLNCVIPNNLAIDLKSKLLVCFIHLGALNLVQSLLNDFLSSDVEKAG 352
Query: 280 DLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYK 339
DL ++ + ++GH A+K L N D G ++LK A+C L AI +YK
Sbjct: 353 DLYMDIEEAFSAVGHYEMAIKLLEPLIKNTSFDLGAVWLKYADCLNKLGRHDDAIESYYK 412
Query: 340 ALDRFEDNIDARLTLASLLLEEAKEEEAITLL 371
L + DAR L ++L + + ++A+ +L
Sbjct: 413 VLKHVPQHADARRKLFTILENKGRIDDALNIL 444
>gi|391330466|ref|XP_003739681.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Metaseiulus occidentalis]
Length = 911
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 164/379 (43%), Gaps = 35/379 (9%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
KL + LG+ASL A G ++AI EV+R++P+ + Y TLG G+ A
Sbjct: 197 KLPRDLQGSLGQASLHLAAGRLDEAIEKCMEVIRIAPDAADAYKTLGTIFMQQGDDLKAL 256
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+I +L P D+ W +L ++++ G+ QA+ ++A++AEP++ + + + E
Sbjct: 257 QVSMIGVYLRPNDAQEWHRLASWSLDLGNREQALLCFKRAVKAEPENAEFYLEIVTLASE 316
Query: 149 IGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+G++ + F +N + ++T AQ+ K G+ + +LE + P
Sbjct: 317 LGNHRDCFRYGTSVIPRFAENQAQMCIQLSRTIAQIQYKYGKPTKGAEVLELAFRRFPDA 376
Query: 204 ADLSVIDLLVAILMENNAYEKTL-------------------QHIEHAQIVRFSGKELPL 244
+ +L+ I +E + K L +H + LPL
Sbjct: 377 ISSEDVHMLLEIQIEAELFTKALKVLISHCGIEVEPRLDPDAEHWDLRDAKSLKMVNLPL 436
Query: 245 KLKVKAGICYLRLGN----MEKAEILFADLQWKNAID-HADLITEVADTLMSLGHSNSAL 299
+ K +C LG ++ E + K +D DL+ +VA+ + G ++ +
Sbjct: 437 DILSKCIVCVAHLGGVHLVLDSVEPII-----KGGLDATGDLVFDVAEAFLQNGATSRSR 491
Query: 300 KYYHFLETNAGTDNGYLYLKLAECYLSL-KERAHAIMFFYKALDRFEDNIDARLTLASLL 358
+ L + ++ LA+ + E + I + K L+ D+IDARL +S L
Sbjct: 492 ELCELLLKTEKFNIAGVWWLLAQNLQNFPDEESQCIKAYRKVLEMAPDHIDARLMFSSFL 551
Query: 359 LEEAKEEEAITLLSPPKDL 377
+ + +AI +L DL
Sbjct: 552 EKSGSKADAIEVLKGNNDL 570
>gi|195441977|ref|XP_002068737.1| GK17935 [Drosophila willistoni]
gi|194164822|gb|EDW79723.1| GK17935 [Drosophila willistoni]
Length = 908
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 148/689 (21%), Positives = 282/689 (40%), Gaps = 106/689 (15%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
G +++LSP + ++GEA+L + YG +E A + E++R +P E + TL +
Sbjct: 159 GRRSQLSPALLGLMGEANLSFVYGRYETAERICMEIIRQNPLASEPFYTLAEIYENRDEV 218
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
K F +AAHL+P+D +W ++ VQ+G+ A+A +AI+ PK+ LR+ A
Sbjct: 219 K-FLHFSTLAAHLNPQDRDMWIRISDLLVQQGNMARARLIFTKAIKVLPKEYLLRMRKAQ 277
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG----ILEEY---- 196
++G+ A +Y ++ L P VD ++ C TA+++ +LE+Y
Sbjct: 278 LLEKMGETNAAMFTYLKMIPLMP--VDE-------WITCLNTAKNVARFFHVLEKYSIAL 328
Query: 197 ------LKVHPSDADLSVIDLLVAILMENNAYEKTL-------------QHIEHAQIVRF 237
+V S L +++ + +L+ N Y K L Q E ++ F
Sbjct: 329 QAMNGAYEVCGSRFQLEDLNIYMELLILNKQYVKVLHCLRERTQLQLETQPDESPDLIYF 388
Query: 238 SG--KELPLKLKVKAGICYLRLGNMEKAEILFADLQ--WKNAIDHADLITEVADTLMSLG 293
+ +L+ K + + +G L +LQ ++ +L +V + LM
Sbjct: 389 CDIPDDYVPELRSKLCVSLVHMGAHHLFGYLIQNLQEHITLTVERVELYMDVTEALMQEH 448
Query: 294 HSNSALKYYHFLETNAGTDN--GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDAR 351
A+ + T+ T +++L+ A+C L AI + + ++ +A+
Sbjct: 449 KYAEAIALMRPI-TDGETFECPAFVWLRQADCLRQLNRTNEAIQCYARVVELAPFCYEAK 507
Query: 352 LTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPE 411
TL++LL ++ + EEA+ L + +S + P L+ +++ + C + + G E
Sbjct: 508 FTLSALLKQQGRNEEAVQALEQSAEAES------EGQP--LHARLLYERCVMLQQIGRIE 559
Query: 412 DFVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYNNLPTDSILCGIRPAAPKS 471
+F+D + L+ R +K+K R YN +IL
Sbjct: 560 EFLDVGYVLLG--------RHSIKLKNREEMLAAANGGSAYNTESLKAIL---------- 601
Query: 472 ELLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQEAFREPPLPNLLKNEE 531
R+ ++++ L E + AA H DE + F E L +
Sbjct: 602 ----QMRSLAAGEQQDQLAETSRKDTDAAAAPSHDLTIKDEY--DLFLE--LVSTAFRHG 653
Query: 532 NQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNH 591
Q I +C A+ + +R+ I M LA Y + D
Sbjct: 654 KQSAIERICFAMVTTKRFTPYHHEIERIMILA-------------------CYFNHDCPI 694
Query: 592 GFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPI-II 650
GF + ++ P ++ WN ++ + ++ ++ ++IR L ++ + +
Sbjct: 695 GFSYLRELIAKQPTEVNLWNLLSLLVQQGDEV-----RYFRYIRRLLHRHPHGTSQMRLF 749
Query: 651 SGHQFTMASHHQDAARCYLEAYKLLPENP 679
GH S ++ A Y+ LL ENP
Sbjct: 750 LGHYHLNCSSYKYALNVYV---PLLRENP 775
>gi|125808329|ref|XP_001360713.1| GA21430 [Drosophila pseudoobscura pseudoobscura]
gi|54635885|gb|EAL25288.1| GA21430 [Drosophila pseudoobscura pseudoobscura]
Length = 867
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 193/444 (43%), Gaps = 46/444 (10%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
G G K++LSP + ++GEA+L +AYG +E A + E++R +P E + TL +
Sbjct: 121 GGNLGRKSQLSPALQGLMGEANLSFAYGRYETAERICMEIIRQNPLASEPFYTLAEIYEN 180
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
K F +AAHL+P+D +W ++ VQ+G+ A+A +AI+ PK LR+
Sbjct: 181 RDEVK-FLHFSTLAAHLNPQDRDMWIRVSDLLVQQGNMARARLIYTKAIKVLPKGYLLRL 239
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEE 195
A ++G+ A +Y ++ L P + K A+ F + A ++ +E
Sbjct: 240 RKAQLLEKMGETNAAMFTYLKMLPLMPPEEWSTCLSTAKNVARFFHVLEKHAIALEAMEG 299
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-------------EHAQIVRFSGKEL 242
V + L +++ + +L+ N Y K L + E +++ F +
Sbjct: 300 AYSVCGARFSLEDLNMYLELLIINKRYSKVLSCLRERTNFELEDDQEESLEMIYFCV--I 357
Query: 243 P------LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSN 296
P L+ K+ + +LR ++ I + +L ++ + LM
Sbjct: 358 PDDYAPELRAKLCVSLIHLRAHHLLGYLIQNVQEHITLTVGRVELYMDITEALMQEHKYA 417
Query: 297 SALKYYHFLETNAGTD-NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLA 355
A+ + D +++L+ AEC L AI + + + DA+ TL+
Sbjct: 418 EAIALMSPITDGDTFDCPAFVWLRQAECLRQLNRTNEAIQCYQRVVHLAPVCYDAKFTLS 477
Query: 356 SLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVD 415
+LL ++ + EEA+ L +++ P L +++ + C + + G E+F+D
Sbjct: 478 ALLKQQGRHEEAVEALEQSGEVE--------GQP--LIARLLYERCVMLKQIGRIEEFLD 527
Query: 416 AIFPLVCESLCVEALRQKVKVKRR 439
+ L+ R +K+K R
Sbjct: 528 VGYVLLS--------RHSIKLKNR 543
>gi|195150767|ref|XP_002016322.1| GL10554 [Drosophila persimilis]
gi|194110169|gb|EDW32212.1| GL10554 [Drosophila persimilis]
Length = 867
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 193/444 (43%), Gaps = 46/444 (10%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
G G K++LSP + ++GEA+L +AYG +E A + E++R +P E + TL +
Sbjct: 121 GGNLGRKSQLSPALQGLMGEANLSFAYGRYETAERICMEIIRQNPLASEPFYTLAEIYEN 180
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
K F +AAHL+P+D +W ++ VQ+G+ A+A +AI+ PK LR+
Sbjct: 181 RDEVK-FLHFSTLAAHLNPQDRDMWIRVSDLLVQQGNMARARLIYTKAIKVLPKGYLLRL 239
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEE 195
A ++G+ A +Y ++ L P + K A+ F + A ++ +E
Sbjct: 240 RKAQLLEKMGETNAAMFTYLKMLPLMPPEEWSTCLSTAKNVARFFHVLEKHAIALEAMEG 299
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI-------------EHAQIVRFSGKEL 242
V + L +++ + +L+ N Y K L + E +++ F +
Sbjct: 300 AYSVCGARFSLEDLNMYLELLIINKRYTKVLSCLRERTNFELEDDQEESLEMIYFCV--I 357
Query: 243 P------LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSN 296
P L+ K+ + +LR ++ I + +L ++ + LM
Sbjct: 358 PDDYAPELRAKLCVSLIHLRAHHLLGYLIQNVQEHITLTVGRVELYMDITEALMQEHKYA 417
Query: 297 SALKYYHFLETNAGTD-NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLA 355
A+ + D +++L+ AEC L AI + + + DA+ TL+
Sbjct: 418 EAIALMSPITDGDTFDCPAFVWLRQAECLRQLNRTNEAIQCYQRVVHLAPVCYDAKFTLS 477
Query: 356 SLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVD 415
+LL ++ + EEA+ L +++ P L +++ + C + + G E+F+D
Sbjct: 478 ALLKQQGRHEEAVEALEQSGEVE--------GQP--LIARLLYERCVMLKQIGRIEEFLD 527
Query: 416 AIFPLVCESLCVEALRQKVKVKRR 439
+ L+ R +K+K R
Sbjct: 528 VGYVLLS--------RHSIKLKNR 543
>gi|340713803|ref|XP_003395425.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Bombus terrestris]
Length = 891
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 177/406 (43%), Gaps = 47/406 (11%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS--PNLPETYNTLGLAHS 79
R K K L P + ++GEA+L+YA G+ E A + E++R P+ PE ++TL + +
Sbjct: 142 RHKRKKRTLPPVLQGLMGEANLRYARGDTELAAQICMEIIRQVQVPSAPEPFHTLAMIYE 201
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
KS F +IAAHLSPKD+ W +L +++ GD QA+ +AI+A PKD++L
Sbjct: 202 TDQPEKS-LQFALIAAHLSPKDADQWVRLANMSLEGGDIKQAITCYNKAIQANPKDVTLY 260
Query: 140 IHLASFYVEIGDYEKAAESY-EQIQKLFPDN----VDATKTGAQLFLKCGQTARSIGILE 194
A GD + + + + +L P++ + K A+ +++ +++ +E
Sbjct: 261 ETRAQLLDRNGDKRAYLKGFLKLVHQLEPEDGQNIIKYAKMLAKRYMEENNNEQALEAME 320
Query: 195 EYLKVHPSDADLSVIDLLVAILMENNAYEKTL---------------------------- 226
PS L ++++ IL+ ++++L
Sbjct: 321 NIFSKCPSFITLEEVNIMTEILIALKKFKRSLNILTTYTSIWVKYKSIDGTQDSDLIIKG 380
Query: 227 ------QHIEHAQIVRFSGKELP----LKLKVKAGICYLRLGNMEKAEILFADLQW-KNA 275
+ +E + I +P + LK K + + L M+ AE + +N
Sbjct: 381 FGNEKKEELEDSNICEIESCGVPDNVVVDLKAKFLVILIELNQMKLAENFLPNFYLNENP 440
Query: 276 IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIM 335
DL ++A+ LM AL L + ++L+ AEC++ K+ AI
Sbjct: 441 EISGDLFLDIAEALMGKKEFKHALMLLEPLVNSNNYSLAAVWLRHAECWVGCKDLKKAIK 500
Query: 336 FFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
+ ++ AR LA L + + +AI +L+ + D+LD
Sbjct: 501 SYEVVRQLSSQHLGARTALAKLYKLKGQYNKAIEVLNQDPESDTLD 546
>gi|195488840|ref|XP_002092483.1| GE14218 [Drosophila yakuba]
gi|194178584|gb|EDW92195.1| GE14218 [Drosophila yakuba]
Length = 869
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 194/421 (46%), Gaps = 40/421 (9%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
K++LS + ++GEA+L + YG +E A + E++R +P E + TL + K
Sbjct: 130 KSQLSTALQGLMGEANLSFVYGRYETAERICMEIIRQNPLASEPFYTLAEIYENRDEVK- 188
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
+F +AAHL+P+D +W ++ VQ+G+ A+A +AI+ PK LR+ A
Sbjct: 189 FLNFSTLAAHLNPQDRDMWIRVSDLLVQQGNLARARLIYTKAIKMLPKVYQLRLRKAQLL 248
Query: 147 VEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++G+ + +Y ++ L P + ++ K A+ F + + ++ +E V
Sbjct: 249 QKMGETNASMFTYLKMLPLMPPDEWKMCLNTAKNVARYFHVLEKHSLALEAMEGAYSVCG 308
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHI-EHAQIVRFSGKELPLKL------------KV 248
+ L I++ + +L+ N Y K L+ + E + +E L+L ++
Sbjct: 309 ARFSLEDINIYLELLILNKQYAKVLRCLRERTNFELENDQEESLELIYFCEIPDDYVPEL 368
Query: 249 KAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHS-NSALKYYHFLET 307
+A +C + L +M +L +Q N +H L T+ + M + + KY +
Sbjct: 369 RAKLC-VSLIHMRAHHLLGYLIQ--NVQEHITLTTDRVELYMDITEALMQEHKYAEAIAL 425
Query: 308 NAGTDNG-------YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
+ +G +++L+ AEC L AI + K + DAR TL++LL +
Sbjct: 426 MSPITDGDTVECPAFVWLRQAECLRQLNRTNEAIQSYEKVVQLAPFCYDARFTLSALLKQ 485
Query: 361 EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL 420
+ + EEA+ L P + + P L +++ + C + + G E+F+D + L
Sbjct: 486 QGRHEEAVQALEQPGETE--------GQP--LIARLLYERCVMLQQIGRIEEFLDVGYAL 535
Query: 421 V 421
+
Sbjct: 536 L 536
>gi|121702795|ref|XP_001269662.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Aspergillus clavatus NRRL 1]
gi|119397805|gb|EAW08236.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Aspergillus clavatus NRRL 1]
Length = 1092
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 178/414 (42%), Gaps = 66/414 (15%)
Query: 20 RGRRKGSKNKLSPGVT-KML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P KML EA+ + G++++AI L+K ++++P + ++ L
Sbjct: 146 KGIKRGPRKPLEPSPEFKMLHSEATSAFIDGDYDRAIELVKRAIQINPEMFAAHSLLSEI 205
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GD---TA--QAMYYIRQAIRA 131
A G A AH P+D+++W ++ +++ GD TA +Y + + I
Sbjct: 206 FLAQGQKDKALTALFNGAHTRPRDASVWSKVAKMILERAGDDRPTALNDVVYCLSRVIDI 265
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
EPK+ + R A+ Y E+G +AA YE+I + P N A + A+ ++ +++
Sbjct: 266 EPKNYNARFQRAAVYRELGHNGRAAIEYERILREIPHNTRALRHLAETYIDLEDVQKAVA 325
Query: 192 ----ILEEYLKVHPSD------ADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFS--- 238
+E Y+ + P D +D+++ L + L ++ K L+ + + R
Sbjct: 326 QWAVSVEYYMTLDPDDTPDFSWSDVNIYVELYSYLGQHEQGLKALRSVSRWLLGRRDDTM 385
Query: 239 -----------------------------------GKELPLKLKVKAGICYLRLGNMEKA 263
G LPL+L++K G+ LR+G K
Sbjct: 386 WEDFNEDDREWDATDSPRRIKVDGYIPGRWPRDSYGLGLPLELRIKLGLFRLRMGYDHKG 445
Query: 264 EILFADLQWKNAI---------DHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L W N D+ DL EVAD L +G + AL+YY ++ A +
Sbjct: 446 EALH-HFSWLNPDDTSEGARLHDYGDLFREVADALKEVGLLDEALRYYTPIQQTAEYADI 504
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
++ + +C++ L A + + NI++R LA L E+A+
Sbjct: 505 SYFMAMGDCFMQLDNLEEAENCYLTVAEHDARNIESRAHLARLYESIGMNEQAL 558
>gi|426221274|ref|XP_004004835.1| PREDICTED: general transcription factor 3C polypeptide 3 isoform 3
[Ovis aries]
Length = 413
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 121/228 (53%), Gaps = 10/228 (4%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 131 TKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAM 190
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 191 IYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 250
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIG 191
+S Y ++GD++ A + Y +I L P + + T+ A+ + + +I
Sbjct: 251 RYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAIN 310
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG 239
I+EE L H + +++ + + N Y++ L+ I FSG
Sbjct: 311 IIEEALSKHQGLVSMEDVNIAAELYISNKQYDRALE-----VITDFSG 353
>gi|195335129|ref|XP_002034228.1| GM20009 [Drosophila sechellia]
gi|194126198|gb|EDW48241.1| GM20009 [Drosophila sechellia]
Length = 868
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 190/421 (45%), Gaps = 40/421 (9%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
K++LS + ++GEA+L + YG FE A + E++R +P E + TL + K
Sbjct: 129 KSQLSTALQGLMGEANLSFVYGRFETAERICMEIIRQNPLASEPFYTLAEIYENRDEVKF 188
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
+F +AAHL+P+D +W ++ VQ+G+ A+A +AI+ PK LR+ A
Sbjct: 189 -LNFSTLAAHLNPQDRDMWIRVSDLLVQQGNLARARLIYTKAIKMLPKVYQLRLRKAQLL 247
Query: 147 VEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++G+ + +Y ++ L P + ++ K A+ F + + ++ +E V
Sbjct: 248 QKMGETNASMFTYLKMLPLMPPDEWKMCLNTAKNVARYFHVLEKHSLALEAMEGAYSVCG 307
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHI-------------EHAQIVRFSGKELP----- 243
+ L I++ + +L+ N Y K L+ + E +++ F E+P
Sbjct: 308 ARFTLEDINIYLELLILNKQYAKVLRCLRERTNFELENDQEESLELIYFC--EIPDDYVP 365
Query: 244 -LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY 302
L+ K+ + ++R ++ I D +L ++ + LM A+
Sbjct: 366 ELRAKLCVSLIHMRAHHLLGYLIQNVQEHITLTADRVELYMDITEALMQEHKYAEAIALM 425
Query: 303 HFLETNAGTDN--GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
+ T+ T +++L+ AEC L AI + K + DAR TL++LL +
Sbjct: 426 SPI-TDGDTVECPAFVWLRQAECLRQLNRTNEAIQSYEKVVQLAPFCYDARFTLSALLKQ 484
Query: 361 EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL 420
+ + EEA+ L P + + P L +++ + C + + G E+F+D + L
Sbjct: 485 QGRHEEAVQALEQPGEAE--------GQP--LIARLLYERCVMLQQIGRIEEFLDVGYAL 534
Query: 421 V 421
+
Sbjct: 535 L 535
>gi|443707886|gb|ELU03270.1| hypothetical protein CAPTEDRAFT_162722 [Capitella teleta]
Length = 741
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 190/421 (45%), Gaps = 37/421 (8%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L + ++GEA++++A G+ ++A+S+ EV+R+ PN E + T+ + + G+H+
Sbjct: 3 TRLPRDMQGLMGEANMRFARGDHDEAMSMCMEVIRVVPNAWEPFQTMSMIYEEKGDHEKC 62
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ +I AHL+ ++ W ++ V QA QAIR +PKDI+L Y
Sbjct: 63 LQYSLIGAHLNGRNLQEWIKVAEMCVDMDRLLQASMCYTQAIRCDPKDINLWFLRCDLYE 122
Query: 148 EIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+IGD ++ E Y+ I + P+ + T+ A F G A++ + + +P+
Sbjct: 123 KIGDKKRMIEGYQHILDMLPEEKGERFLQITRDLATNFHSSGDYAKASAAMLRAFEQYPA 182
Query: 203 DADLS-------------------VIDLLVAILMENNAYEKTLQHIEHAQ-IVRFSGKEL 242
A + ++D + + + +L+ + + + ++ + ++
Sbjct: 183 AASIEDLNLLMELYLLQKEYSSGIMVDASFRTRISERSRKVSLKSLINTEFLIPYLRCKI 242
Query: 243 P----LKLKVKAGICYLRLGNMEKA-EILFADLQWKNAIDHADLITEVADTLMSLGHSNS 297
P + L+ K +C + L M + L + +N D DL ++A+ M G
Sbjct: 243 PENFHVDLRTKLIVCCVHLHLMLFCLQNLTVKIMTENPEDIGDLYLDIAEAFMEAGSYKE 302
Query: 298 ALKYY-HFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLAS 356
A +++ D ++L+ EC S+ + A+ + + + ++ AR++L++
Sbjct: 303 AQPILAKLVKSKNYCDLAAVWLRYGECLNSIGDLNGAVHAYKRVVVLAPGHLSARVSLSA 362
Query: 357 LLLEEAKEEEAITLLS-PPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVD 415
L + + EEA+ L+ P+ D + P ++++ C + ++ E+FV+
Sbjct: 363 LQQQLGRPEEALAALNQAPQSRSDDDTEGQLTEP-----RLLLHRCSLLYSQQHWEEFVE 417
Query: 416 A 416
Sbjct: 418 C 418
>gi|350409558|ref|XP_003488778.1| PREDICTED: general transcription factor 3C polypeptide 3-like
[Bombus impatiens]
Length = 891
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 177/406 (43%), Gaps = 47/406 (11%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS--PNLPETYNTLGLAHS 79
R K K L P + ++GEA+L+YA G+ E A + E++R P+ PE ++TL + +
Sbjct: 142 RHKRKKRTLPPVLQGLMGEANLRYARGDTELAAQICMEIIRQVQVPSAPEPFHTLAMIYE 201
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
KS F +IAAHLSPKD+ W +L +++ GD QA+ +AI+A PKD++L
Sbjct: 202 TDQPEKS-LQFALIAAHLSPKDADQWVRLANMSLEGGDIKQAITCYNKAIQANPKDVTLY 260
Query: 140 IHLASFYVEIGDYEKAAESY-EQIQKLFPDN----VDATKTGAQLFLKCGQTARSIGILE 194
A GD + + + + +L P++ + K A+ +++ +++ +E
Sbjct: 261 ETRAQLLDRNGDKRAYLKGFLKLVHQLEPEDGINIIKYAKMLAKRYMEENNNEQALEAME 320
Query: 195 EYLKVHPSDADLSVIDLLVAILMENNAYEKTL---------------------------- 226
PS L ++++ IL+ ++++L
Sbjct: 321 NIFSKCPSFITLEEVNIMTEILIALKKFKRSLNILTTYTSIWVKYKTIDGTQDSDLIIKR 380
Query: 227 ------QHIEHAQIVRFSGKELP----LKLKVKAGICYLRLGNMEKAEILFADLQW-KNA 275
+ +E + I +P + LK K + + L M+ AE + +N
Sbjct: 381 FGNEKKEELEDSNICEIESCGVPDNVVVDLKAKFLVILIELNQMKLAENFLPNFYLNENP 440
Query: 276 IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIM 335
DL ++A+ LM AL L + ++L+ AEC++ K+ AI
Sbjct: 441 EISGDLFLDIAEALMGKKEFKHALMLLEPLVNSNNYSLAAVWLRHAECWVGCKDLKKAIK 500
Query: 336 FFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
+ ++ AR LA L + + +AI +L+ + D+LD
Sbjct: 501 SYEVVRQLSSQHLGARTALAKLYKLKGQYNKAIEVLNQDPESDTLD 546
>gi|195584118|ref|XP_002081862.1| GD25498 [Drosophila simulans]
gi|194193871|gb|EDX07447.1| GD25498 [Drosophila simulans]
Length = 868
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 190/421 (45%), Gaps = 40/421 (9%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
K++LS + ++GEA+L + YG FE A + E++R +P E + TL + K
Sbjct: 129 KSQLSTALQGLMGEANLSFVYGRFETAERICMEIIRQNPLASEPFYTLAEIYENRDEVKF 188
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
+F +AAHL+P+D +W ++ VQ+G+ A+A +AI+ PK LR+ A
Sbjct: 189 -LNFSTLAAHLNPQDRDMWIRVSDLLVQQGNLARARLIYTKAIKMLPKVYQLRLRKAQLL 247
Query: 147 VEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++G+ + +Y ++ L P + ++ K A+ F + + ++ +E V
Sbjct: 248 QKMGETNASMFTYLKMLPLMPPDEWKMCLNTAKNVARYFHVLEKHSLALEAMEGAYSVCG 307
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHI-------------EHAQIVRFSGKELP----- 243
+ L I++ + +L+ N Y K L+ + E +++ F E+P
Sbjct: 308 ARFTLEDINIYLELLILNKQYAKVLRCLRERTNFELENDQEESLELIYFC--EIPDDYVP 365
Query: 244 -LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY 302
L+ K+ + ++R ++ I D +L ++ + LM A+
Sbjct: 366 ELRAKLCVSLIHMRAHHLLGYLIQNVQEHITLTADRVELYMDITEALMQEHKYAEAIALM 425
Query: 303 HFLETNAGTDN--GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
+ T+ T +++L+ AEC L AI + K + DAR TL++LL +
Sbjct: 426 SPI-TDGDTVECPAFVWLRQAECLRQLNRTNEAIQSYEKVVQLAPFCYDARFTLSALLKQ 484
Query: 361 EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL 420
+ + EEA+ L P + + P L +++ + C + + G E+F+D + L
Sbjct: 485 QGRHEEAVQALEQPGEAE--------GQP--LIARLLYERCVMLQQIGRIEEFLDVGYAL 534
Query: 421 V 421
+
Sbjct: 535 L 535
>gi|412988450|emb|CCO17786.1| hypothetical protein Bathy08g02810 [Bathycoccus prasinos]
Length = 1064
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 214/497 (43%), Gaps = 79/497 (15%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
R K ++S K+LG A++ Y E+AI E + ++P+ Y+TLGL + G
Sbjct: 133 RVSRKMRVSAEAEKILGLANMLYVQNFVEEAIEKCHECITVAPHEASPYHTLGLIYEEKG 192
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS----- 137
+ A DFY IAAH+S KD LW ++ A+ + A+Y + +A++A +
Sbjct: 193 DMAKAMDFYSIAAHVSKKDVELWLRIADMALTLENRRHAIYCLSRAVKASEGILDDAERN 252
Query: 138 -LRIHLASFYVEIGDYEKAAESYEQ-IQKLFPDNV-----DATKTGAQLFLKCGQTARSI 190
LR++ A Y E G+ +A YEQ I+ L P +V D L ++C +
Sbjct: 253 LLRLNSADLYEEFGEKRQAIAQYEQIIESLGPKDVLIDPYDVHIKCMSLCMECSLKPNAA 312
Query: 191 GILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIV-----RFSGKEL--- 242
+L Y + + + D+ + L+ ++ E + +EK ++++E + V FS KE+
Sbjct: 313 KVLGGYARKNAARVDMKTMLFLIDLVSELDWWEKVVEYVELCRRVWEEKGHFSYKEMKTF 372
Query: 243 PLK---LKVKAGI-----------------------CYLRLGNMEKAEIL--------FA 268
PL +K +A I LR+G M I+ A
Sbjct: 373 PLNCEAMKARALIMLSGIYKQHKTDEDAIKYEKNCEAKLRVGRMCTDVIMDAIEKAAPRA 432
Query: 269 DLQWKNAIDHADLITEVADTLMSLGHS--------NSALKYYH-FLETNAGTDNGYLYLK 319
+ KN DL +E L L H+ + A++ Y L + D+ ++ K
Sbjct: 433 EKGEKNVFPFPDLSSE---NLFRLAHAHREHGNDQHKAMEVYKALLIYDKTRDSADVWEK 489
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDS 379
+A+C + A + + + + AR+ L + L E K+EE + P L+
Sbjct: 490 MADCARIARGVEGAKQVYEEICSTRKHSSAARVQLTEIFLYELKDEEKAKEMLPS--LEE 547
Query: 380 LDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVC----ESLCVEALRQKVK 435
L +S +++ ++++ + R+ +DF+ P V E+L V+A QK++
Sbjct: 548 LVNDS-------VDDNVLLRASELRRSLQNMDDFIRESLPTVQQILDEALDVKAQIQKLR 600
Query: 436 VKRRLTKGILQQRTKIY 452
+ + I R Y
Sbjct: 601 ADAKHLQNIEDARNSAY 617
>gi|154299172|ref|XP_001550006.1| hypothetical protein BC1G_11764 [Botryotinia fuckeliana B05.10]
Length = 1043
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 160/379 (42%), Gaps = 59/379 (15%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG+A+ + G E+A + E+VR++ E + L LG + SA ++AA
Sbjct: 162 LGQANHAFLNGRCEEARDIAAEIVRINAETYEAWTLLSACFKELGEYNSAVKALMVAATW 221
Query: 98 SPKDSALWKQLLTFAV-QKGD-----TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
PK W L FA+ + GD A Y +Q +RA+ +D+ R AS +E +
Sbjct: 222 RPKHPGAWYAALNFALNETGDLRSEFLISAQYAAQQILRADSQDLEARRIKASLMLERRN 281
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL-KVHPSDADL---- 206
AA+ YE I K P + + +T A +++ GQ ++ + L K +D ++
Sbjct: 282 LSHAAKEYEIILKRCPFDTEVIQTLASIYVDRGQVEVAMKLYTRTLDKFKKADVEIDTPF 341
Query: 207 --------------------------SVIDLLVAILMEN-------NAYEKTLQHIEHAQ 233
SV LV E+ + E HI ++
Sbjct: 342 GWTDAYAYVELFGLMEKYTEGIKELRSVARWLVGRGEEDFWDQFVDDDREWDDDHIRRSE 401
Query: 234 IVRFSGKE---------LPLKLKVKAGICYLRLGNMEKAEILF-----ADLQWKNAIDH- 278
+F K LP++L+VK G+ L LG+ +A F +D + I+
Sbjct: 402 CSQFDAKTFPLDTYGPGLPVELRVKLGLYRLFLGHYTEAMRHFSYLKTSDYNGQGLIEEF 461
Query: 279 ADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
L EVADTL G++ AL YY L G++ L K+ +C+L K A + F
Sbjct: 462 PHLFEEVADTLAEKGYNKDALDYYLPLAPGVGSEGSSLQFKMGKCWLGEKSDQEAELCFQ 521
Query: 339 KALDRFEDNIDARLTLASL 357
A+ DNI AR+ LA L
Sbjct: 522 NAVQMEVDNIPARMELAKL 540
>gi|347835040|emb|CCD49612.1| similar to RNA polymerase III transcription factor TFIIIC subunit
Tfc4 [Botryotinia fuckeliana]
Length = 1035
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 160/379 (42%), Gaps = 59/379 (15%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG+A+ + G E+A + E+VR++ E + L LG + SA ++AA
Sbjct: 162 LGQANHAFLNGRCEEARDIAAEIVRINAETYEAWTLLSACFKELGEYNSAVKALMVAATW 221
Query: 98 SPKDSALWKQLLTFAV-QKGD-----TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
PK W L FA+ + GD A Y +Q +RA+ +D+ R AS +E +
Sbjct: 222 RPKHPGAWYAALNFALNETGDLRSEFLISAQYAAQQILRADSQDLEARRIKASLMLERRN 281
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL-KVHPSDADL---- 206
AA+ YE I K P + + +T A +++ GQ ++ + L K +D ++
Sbjct: 282 LSHAAKEYEIILKRCPFDTEVIQTLASIYVDRGQVEVAMKLYTRTLDKFKKADVEIDTPF 341
Query: 207 --------------------------SVIDLLVAILMEN-------NAYEKTLQHIEHAQ 233
SV LV E+ + E HI ++
Sbjct: 342 GWTDAYAYVELFGLMEKYTEGIKELRSVARWLVGRGEEDFWDQFVDDDREWDDDHIRRSE 401
Query: 234 IVRFS---------GKELPLKLKVKAGICYLRLGNMEKAEILF-----ADLQWKNAIDH- 278
+F G LP++L+VK G+ L LG+ +A F +D + I+
Sbjct: 402 CSQFDAKTFPLDTYGPGLPVELRVKLGLYRLFLGHYTEAMRHFSYLKTSDYNGQGLIEEF 461
Query: 279 ADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
L EVADTL G++ AL YY L G++ L K+ +C+L K A + F
Sbjct: 462 PHLFEEVADTLAEKGYNKDALDYYLPLAPGVGSEGSSLQFKMGKCWLGEKSDQEAELCFQ 521
Query: 339 KALDRFEDNIDARLTLASL 357
A+ DNI AR+ LA L
Sbjct: 522 NAVQMEVDNIPARMELAKL 540
>gi|24654335|ref|NP_611184.1| CG8950, isoform A [Drosophila melanogaster]
gi|386768173|ref|NP_001246384.1| CG8950, isoform B [Drosophila melanogaster]
gi|7302835|gb|AAF57909.1| CG8950, isoform A [Drosophila melanogaster]
gi|21428590|gb|AAM49955.1| LD44919p [Drosophila melanogaster]
gi|220942382|gb|ACL83734.1| CG8950-PA [synthetic construct]
gi|220952760|gb|ACL88923.1| CG8950-PA [synthetic construct]
gi|383302545|gb|AFH08137.1| CG8950, isoform B [Drosophila melanogaster]
Length = 868
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 190/421 (45%), Gaps = 40/421 (9%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
K++LS + ++GEA+L + YG +E A + E++R +P E + TL + K
Sbjct: 129 KSQLSTALQGLMGEANLSFVYGRYETAERICMEIIRQNPLASEPFYTLAEIYENRDEVKF 188
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
+F +AAHL+P+D +W ++ VQ+G+ A+A +AI+ PK LR+ A
Sbjct: 189 -LNFSTLAAHLNPQDRDMWIRVSDLLVQQGNLARARLIYTKAIKMLPKVYQLRLRKAQLL 247
Query: 147 VEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++G+ + +Y ++ L P + ++ K A+ F + + ++ +E V
Sbjct: 248 QKMGETNASMFTYLKMLPLMPPDEWKMCLNTAKNVARYFHVLEKHSLALEAMEGAYSVCG 307
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHI-------------EHAQIVRFSGKELP----- 243
+ L I++ + +L+ N Y K L+ + E +++ F E+P
Sbjct: 308 ARFTLEDINIYLELLILNKQYAKVLRCLRERTNFELENDQEESLELIYFC--EIPDDYVP 365
Query: 244 -LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY 302
L+ K+ + ++R ++ I D +L ++ + LM A+
Sbjct: 366 ELRAKLCVSLIHMRAHHLLGYLIQNVQEHITLTADRVELYMDITEALMQEHKYAEAIALM 425
Query: 303 HFLETNAGTDN--GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
+ T+ T +++L+ AEC L AI + K + DAR TL++LL +
Sbjct: 426 SPI-TDGDTVECPAFVWLRQAECLRQLNRTNEAIQSYEKVVQLAPFCYDARFTLSALLKQ 484
Query: 361 EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL 420
+ + EEA+ L P + + P L +++ + C + + G E+F+D + L
Sbjct: 485 QGRHEEAVQALEQPGEAE--------GQP--LIARLLYERCVMLQQIGRIEEFLDVGYAL 534
Query: 421 V 421
+
Sbjct: 535 L 535
>gi|194882327|ref|XP_001975263.1| GG22221 [Drosophila erecta]
gi|190658450|gb|EDV55663.1| GG22221 [Drosophila erecta]
Length = 869
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 190/421 (45%), Gaps = 40/421 (9%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
K++LS + ++GEA+L +AY +E A + E++R +P E + TL + K
Sbjct: 130 KSQLSTALQGLMGEANLSFAYCRYETAERICMEIIRQNPLASEPFYTLAEIYENRDEVKF 189
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
+F +AAHL+P+D +W ++ VQ+G+ A+A +AI+ PK LR+ A
Sbjct: 190 -LNFSTLAAHLNPQDRDMWIRVSDLLVQQGNLARARLIYTKAIKMLPKVYQLRLRKAQLL 248
Query: 147 VEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++G+ + +Y ++ L P + ++ K A+ F + + ++ +E V
Sbjct: 249 QKMGETNASMFTYLKMLPLMPPDEWKMCLNTAKNVARYFHVLEKHSLALEAMEGAYSVCG 308
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHI-------------EHAQIVRFSGKELP----- 243
+ L I++ + +L+ N Y K L+ + E +++ F E+P
Sbjct: 309 ARFSLEDINIYLELLILNKQYAKVLRCLRERTNFELENDQEESLELIYFC--EIPDDYVP 366
Query: 244 -LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY 302
L+ K+ + ++R ++ I D +L ++ + LM A+
Sbjct: 367 ELRAKLCVSLIHMRAHHLLGYLIQNVQEHITLTADRVELYMDITEALMQEHKYAEAIALM 426
Query: 303 HFLETNAGTDN--GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
+ T+ T +++L+ AEC L AI + + + DAR TL++LL +
Sbjct: 427 SPI-TDGDTVECPAFVWLRQAECLRQLNRTNEAIQSYERVVQLAPFCYDARFTLSALLKQ 485
Query: 361 EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL 420
+ + EEA+ L P + D P L +++ + C + + G E+F+D + L
Sbjct: 486 QGRHEEAVQALEQPGEAD--------GQP--LIARLLYERCVMLQQIGRIEEFLDVGYAL 535
Query: 421 V 421
+
Sbjct: 536 L 536
>gi|328870805|gb|EGG19178.1| transcription factor IIIC-gamma subunit [Dictyostelium
fasciculatum]
Length = 1238
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 160/365 (43%), Gaps = 9/365 (2%)
Query: 14 RKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNT 73
RK K++ + +LS V K+ +A + FE + ++ EV+RL+P +Y
Sbjct: 509 RKQRKRKPATPSNGPRLSKQVKKLAAKALGLFIEEKFEDSFTVFTEVIRLAPTYTRSYTI 568
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
L G+ KSA DF + A + D LWK+ A + GD + +Y +R+
Sbjct: 569 LSRIREEQGDLKSAADFVYVGAKIGKNDPDLWKRASELARKNGDDERFIYCLRRLRYLNV 628
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
D+ + LA + + G A + + +QKL PD+ AQ+ L + +I L
Sbjct: 629 DDLETQWELAIAFQQQGRLNMAYKVLQVLQKLRPDDAIVALEYAQVLLNLKKKTVAINFL 688
Query: 194 EEYLKV---HPSDA-DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVK 249
E ++++ P + DL ++L+ + + Y KT+Q + + + E+P+ +
Sbjct: 689 EGFIEIELKRPFETIDLGCFNMLLGLYNKETQYAKTVQLFQRIRGIYPDDYEIPVDIVYN 748
Query: 250 AGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNA 309
A I + L + + ++ + ++ DL +A+ L G AL L
Sbjct: 749 ASIAFYELNDDKFGDVCMNKILQESPSAVGDLYIGLAEKLSIQGRYERALT---LLLKVL 805
Query: 310 GT--DNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEA 367
GT D +++ + Y LK+ ++I +F L +N + + L+ + E + +
Sbjct: 806 GTEFDRPSIWILIGSIYKDLKQYENSIHYFENVLQYEPNNRNVTILLSDIYKELGDVQRS 865
Query: 368 ITLLS 372
+L+
Sbjct: 866 FQILN 870
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
Query: 523 LPNLLKNEENQC--LIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGA 580
+P K EEN L+ +L K L QR EA+ + + LA+ L + +L+ L
Sbjct: 968 IPEAEKLEENDYFNLLFNLTKTLPYKQRGAEAAGYLRYA--LAFISLATIHETQLKFLLV 1025
Query: 581 KMAYDSTDPNHG-FDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSK-FIRYLR 638
+A + P KY+ P S WN + +++ R ++ + K F++ +
Sbjct: 1026 AIALTTNRPRLATVKHVKYVCAEKPKSHRIWNLFNRIIIRS---KGRYYYYQKAFLQSMA 1082
Query: 639 AKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
++ D +P II G+ + A YL++Y P+ PL+ L
Sbjct: 1083 DRFPDSLPISIIYGNCNLILGGTTIALHEYLKSYGQYPKEPLVQL 1127
>gi|332164729|ref|NP_001193703.1| general transcription factor 3C polypeptide 3 isoform 2 [Homo
sapiens]
gi|18481637|gb|AAL73493.1|AF465407_1 transcription factor IIIC102 short isoform [Homo sapiens]
gi|119590539|gb|EAW70133.1| general transcription factor IIIC, polypeptide 3, 102kDa, isoform
CRA_b [Homo sapiens]
Length = 413
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 119/227 (52%), Gaps = 10/227 (4%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
KK + K ++KL + ++GEA++++A G E+AI + E++R +P E ++TL +
Sbjct: 133 KKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMI 192
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
+ G+ + + F +IAAHL+P D+ W +L ++++ + QA++ +A++ EP ++
Sbjct: 193 YEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVR 252
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLF-PDN----VDATKTGAQLFLKCGQTARSIGI 192
+S Y ++GD++ A + Y +I L P + + + A+ + + +I I
Sbjct: 253 YLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINI 312
Query: 193 LEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG 239
++E H + +++ + + N Y+K L+ I FSG
Sbjct: 313 IDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEI-----ITDFSG 354
>gi|322695687|gb|EFY87491.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Metarhizium acridum CQMa 102]
Length = 644
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 172/420 (40%), Gaps = 68/420 (16%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
+ T + RG RK +K + +T L + + + G++EQA+ L EV+R++ +
Sbjct: 52 RGTSRGRAPRGPRKAAKPR--GDITARLSKVNQAFLSGDYEQAMDLAFEVIRINAETHQA 109
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV--------QKGDTAQAM 122
+ L G A V AAHL PKD + W + +FA+ + G+ A
Sbjct: 110 WTALSSIFRERGEMDRALSAMVYAAHLRPKDVSEWLRCASFALDSITGEDDEPGNLHTAR 169
Query: 123 YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK 182
A+RA+P + R++ A G A Y + K P +++ + A+ +
Sbjct: 170 LCYSAALRADPTNFEARLNKADVCHRQGHLSAAITEYNTVLKRRPYDLNTIRKLAEACID 229
Query: 183 CGQTA----RSIGILEEYLKVHPSDADLSVIDLL-------VAILMENNAYEKTLQHIEH 231
A +I Y S+ L D+L V +L + ++ + ++
Sbjct: 230 SKNAATLVPSAINAYRHYFDHAMSEMQLEAQDMLWHDVGIYVGLLAQVERVQEAISELKR 289
Query: 232 -------------------------------AQIVRFS---------GKELPLKLKVKAG 251
A + FS G+ LPL L+V+
Sbjct: 290 LSRWLLGRSAETFWDNWRDDDREWDILDNRRASVPEFSHLGNNSTQFGQSLPLDLRVRLA 349
Query: 252 ICYLRLGNMEKA-----EILFADLQWKN-AIDHADLITEVADTLMSLGHSNSALKYYHFL 305
LR G+ +A + AD K A D LI ++ L G ++ A++Y+ L
Sbjct: 350 TYRLRNGDHSEAMKHLDHLDPADPSTKAFAGDFTFLIYDLGVELGKNGQASRAIRYFELL 409
Query: 306 ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEE 365
+ +G + + L+L CYL E A A + ALD EDNIDAR+ LA+ + E+A+E+
Sbjct: 410 RSMSGDPDAAVLLQLGRCYLGTGESAMAEEYLLAALDAEEDNIDARIELAN-MYEKARED 468
>gi|194756626|ref|XP_001960577.1| GF13427 [Drosophila ananassae]
gi|190621875|gb|EDV37399.1| GF13427 [Drosophila ananassae]
Length = 855
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 188/421 (44%), Gaps = 41/421 (9%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
K++LS + ++GEA++ + YG FE A + E++R +P E + TL + K
Sbjct: 115 KSQLSTALQGLMGEANISFVYGRFETAERICMEIIRQNPLASEPFYTLAEIYENRDEVK- 173
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
+F +AAHL+P+D +W ++ VQ+G+ ++A +AI+ PK LR+ A
Sbjct: 174 FLNFSTLAAHLNPQDRDMWIRVSDLLVQQGNLSRARLIYTKAIKMLPKVYQLRLRKAQLL 233
Query: 147 VEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++G+ + +Y ++ L P + ++ A+ F + ++ +E V
Sbjct: 234 QKMGETNASMFTYLKMLPLMPPEEWKLCLTTSQNVARYFHALRKHGLALEAMEAAYSVCG 293
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHI-------------EHAQIVRFSGKELPLKLKV 248
+ L I++ + +L+ N Y K L+ + E +++ F ++
Sbjct: 294 ARFTLEDINMYLELLILNKQYAKVLKCLRERTNFEIENDQEESLELIYFCDIPDDFVPEL 353
Query: 249 KAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHS-NSALKYYHFLET 307
+A +C + L +M +L +Q N +H L + + M + + KY +
Sbjct: 354 RAKLC-VSLIHMRAHHLLGYLIQ--NVQEHITLTADRVELYMDITEALMQEHKYAEAIAL 410
Query: 308 NAGTDNG-------YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
+ +G +++L+ AEC L AI + + + DAR TL++LL +
Sbjct: 411 MSPITDGDTVECPAFVWLRQAECLRQLNRTNEAIQCYERVVQLAPFCYDARFTLSALLKQ 470
Query: 361 EAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPL 420
+ + EEA+ L P D P + +++ + C + + G E+F+D + L
Sbjct: 471 QGRNEEAVQALEQP---------GDGEGP--VIARLLYERCVMLKQIGRIEEFLDVGYVL 519
Query: 421 V 421
+
Sbjct: 520 L 520
>gi|224158157|ref|XP_002337939.1| predicted protein [Populus trichocarpa]
gi|222870044|gb|EEF07175.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 75/146 (51%), Gaps = 44/146 (30%)
Query: 539 LCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYDSTDPNHGFDCAKY 598
+CKAL SLQRY EA EIINLS RL + LP +K+EEL+SL A+ A S
Sbjct: 1 MCKALQSLQRYSEAMEIINLSQRLVSDKLPGDKEEELQSLSARKATQSM----------- 49
Query: 599 ILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTM- 657
F+RY++ K+K CV PI+IS H TM
Sbjct: 50 --------------------------------RDFLRYMQRKHKKCVQPIVISAHHSTML 77
Query: 658 ASHHQDAARCYLEAYKLLPENPLINL 683
SHHQDAAR YL+AY L+ E LINL
Sbjct: 78 ISHHQDAARYYLKAYILMQECRLINL 103
>gi|119496787|ref|XP_001265167.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Neosartorya fischeri NRRL 181]
gi|119413329|gb|EAW23270.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Neosartorya fischeri NRRL 181]
Length = 1098
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 168/414 (40%), Gaps = 66/414 (15%)
Query: 20 RGRRKGSKNKLSPGVT-KML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P KML EA+ + G++E AI L+K + ++P + ++ L
Sbjct: 146 KGIKRGPRKPLEPSAEFKMLHSEATSAFIDGDYETAIDLVKRAIHINPEMFAAHSLLSEI 205
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQA-----MYYIRQAIRA 131
A G A AH P+D+++W ++ + + GD A +Y + + I
Sbjct: 206 FLAQGQKDKALTALFSGAHTRPRDASVWFKVAQMILDRAGDDRPAALNDVIYCLSRVIDI 265
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI- 190
EPK+ + R A+ Y E+G +A YE+I K P + A + A+ ++ + +++
Sbjct: 266 EPKNYNARFQRAAVYRELGHNGRAVTEYERILKEVPHHPRALRNLAEAYIDLNEVQKAVD 325
Query: 191 ---GILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFS--- 238
+E Y P DA D+++ L + L K L+ + + R
Sbjct: 326 QWTDSVEYYKSFEPEDAPDFSWSDVNIYAELFSYLGRYEEGLKALKSVSRWLLGRRDDTM 385
Query: 239 -----------------------------------GKELPLKLKVKAGICYLRLGNMEKA 263
G LPL+L++K G+ LR+G K
Sbjct: 386 WENFNEDDREWDANDSPRRIKVDGYIPGRWPRDSYGLGLPLELRIKLGLFRLRMGYDHKN 445
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L W N D+ DL EVAD L +G AL+YY ++ +
Sbjct: 446 EALH-HFSWLNPEDTSEGARLYDYGDLFREVADALKEVGLLGDALRYYTPIQQTTEYADI 504
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
++ + +C++ L A + D NI++R LA L E+A+
Sbjct: 505 SYFMAMGDCFMQLGNIEEAENCYLTVADYDTRNIESRAQLAKLYESIGMTEQAL 558
>gi|403224019|dbj|BAM42149.1| transcription factor [Theileria orientalis strain Shintoku]
Length = 913
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 182/371 (49%), Gaps = 19/371 (5%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH-SALGNHKS 86
+KL+P + K+L EA+ Y NFE+A+ +LKE+VR +P L + ++ LGL + + + +
Sbjct: 95 SKLTPELEKLLQEATDLYLNKNFEEAVKILKELVRRAPGLHDPFHMLGLIYQNEFNDVTT 154
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR--IHLAS 144
A +Y++AAHL P D+ LW+++ + G+ QA+Y ++ R + +++ + LA
Sbjct: 155 ATSYYLLAAHLVPTDTELWQRIGEMSQSSGNIDQAIYCFKKCQRDQDGELNEQAVFALAI 214
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
YVE DY AA+ + + KL P + A+ F + G S+ +L Y +
Sbjct: 215 CYVEKKDYMNAAKRFGALFKLHPHDKLIANQLARCFQQIGDLHSSLLVLGTYFNMTMDTE 274
Query: 205 DL-SVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
L ++++L V + + + Y + L I + + K LP++ V + L L +
Sbjct: 275 ILETILELNVTLSLYEDCY-RILDDICKSN--NLTPKALPVEHLVYYAVACLNLEREAQN 331
Query: 264 EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY---HFLETNAGTDNGYLYLKL 320
E+ F + N + + LI + ++ +LK++ + A + LKL
Sbjct: 332 ELNFLYEKPMN-VKYMFLIA----NHLCPKYAEESLKWFKRGFGMMAIADQLDIPTTLKL 386
Query: 321 AECYLSLKERAHAIM--FFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD 378
A+C ++ H + KAL++ N + +TLA +LL+ + +EA L+S L+
Sbjct: 387 AKCVIA-DGNNHRFLAEVLKKALEKAPTNSEILITLADVLLQLGRNDEADELISQLT-LN 444
Query: 379 SLDMNSDKSNP 389
LD D P
Sbjct: 445 DLDKIRDIPEP 455
>gi|195381509|ref|XP_002049491.1| GJ20720 [Drosophila virilis]
gi|194144288|gb|EDW60684.1| GJ20720 [Drosophila virilis]
Length = 916
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 192/438 (43%), Gaps = 43/438 (9%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
G +++LS + ++GEA+L +AYG F+ A + E++R +P E + TL +
Sbjct: 167 GRRSQLSAALVGLMGEANLSFAYGRFDMAERICMEIIRQNPLASEPFYTLAEIYENRDEV 226
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
K F IAAHL+P+D +W ++ VQ+G A+A +AI+ PKD LR+ A
Sbjct: 227 KF-LHFSTIAAHLNPQDRDMWIRISDLLVQQGHLARARVCYTKAIKVLPKDYLLRLRKAQ 285
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKV 199
+G+ A +Y ++ L P + K A+ F + + ++ +E V
Sbjct: 286 LLERMGETNAAMFTYLKMLPLMPPGEWSLCLTTGKNVARYFHVLEKHSIALEAMEGTYCV 345
Query: 200 HPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKL------------K 247
+ + +++ + +L+ N Y K L+ + + ++ L+L +
Sbjct: 346 CGARFSVEDLNIYLELLILNKQYTKVLRCLRERTKLELETEQESLELIYFCHIPDDYVPE 405
Query: 248 VKAGICYLRLGNMEKAEILFADLQ-----WKNAIDHADLITEVADTLMSLGHSNSALKYY 302
++A +C + L +M +L +Q +D +L ++ + LM A+
Sbjct: 406 LRAKLC-VSLIHMHAHHLLGYIVQNVQEHITPTVDRLELYMDITEALMQEHKYAEAIALM 464
Query: 303 HFLETNAGTD-NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
+ D +++L+ AEC L AI + + + +A+ TL++LL ++
Sbjct: 465 RPITDADSFDCPAFVWLRQAECLRQLNRTQEAIQSYGRVVQLAPYCYEAKFTLSALLKQQ 524
Query: 362 AKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLV 421
+ EEA+ L S + L+ +++ + C + + E+F+D + L+
Sbjct: 525 GRPEEAVKALE----------QSGEQEGQPLHARLLYERCIMLQQINRIEEFLDVGYVLL 574
Query: 422 CESLCVEALRQKVKVKRR 439
R +K+K R
Sbjct: 575 G--------RHSIKLKNR 584
>gi|358380120|gb|EHK17799.1| hypothetical protein TRIVIDRAFT_80659 [Trichoderma virens Gv29-8]
Length = 961
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 170/416 (40%), Gaps = 72/416 (17%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
RK +K + +T L + + + G++ +A+ L+ EV+R++ + + L G
Sbjct: 70 RKAAKPR--GDITARLAKVNQAFLLGDYSKALDLVSEVIRINAETHQAWTALSSIFREQG 127
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFA--VQKGDTAQAMYYIR----QAIRAEPKDI 136
H A V AAHL PKD A W +FA + D A + R A+RA+P ++
Sbjct: 128 EHARALSAMVYAAHLRPKDVAAWLDCASFALNIVSEDEASNLQTARLCYSAALRADPTNL 187
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI--GILE 194
+ R+ A+ + G A Y + K P +++ + A+ + T ++ I+
Sbjct: 188 AARLGKATVCHQQGHLAAAISEYNIVLKHHPYDLEIVRKLAEACIDNKNTEAAVPSAIVA 247
Query: 195 ---------EYLKVHPSDADLSVIDLLVAILMENNAYEKTL------------------- 226
E +H S A I + V ++ Y + +
Sbjct: 248 YRRYFDYEIENTPLHGSSAPWHDIGIYVELIASTGGYAEAIYELKALSRWLVGRVQEQYW 307
Query: 227 -----------------QHIEHAQIVRFS----GKELPLKLKVKAGICYLRLGNMEKAEI 265
H+ H F G LPL + + + LRLG E+A
Sbjct: 308 DQWQVDDCEWDENDERRSHVPHFHDSMFDPELYGPSLPLDFRARLAMYRLRLGEEEEA-- 365
Query: 266 LFADLQWKNAID--HADLITE-------VADTLMSLGHSNSALKYYHFLETNAGTDNGYL 316
F L W + + D ITE +A + G A++Y L + + L
Sbjct: 366 -FRHLTWLDPDNPRTFDFITEFPFISYDLASEIAKYGQPQRAIRYLELLRASTEEADATL 424
Query: 317 YLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
++L CYL+ +++ A F+ A+D E NIDAR+ LA+ + E+AKE+E +L+
Sbjct: 425 LVQLGRCYLATGQQSTAEECFHAAIDAEEYNIDARIELAN-MYEKAKEDEEALILA 479
>gi|159130723|gb|EDP55836.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Aspergillus fumigatus A1163]
Length = 1095
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 197/499 (39%), Gaps = 72/499 (14%)
Query: 20 RGRRKGSKNKLSPGVT-KML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P KML +A+ + G++E AI L+K + ++P + ++ L
Sbjct: 143 KGIKRGPRKPLEPSAEFKMLHSDATSAFIDGDYETAIDLVKRAIHINPEMFAAHSLLSEI 202
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQA-----MYYIRQAIRA 131
A G A AH P+D+++W ++ + + GD A +Y + + I
Sbjct: 203 FLAQGQKDKALTALFSGAHTRPRDASVWFKVAQMILDRAGDDRPAALNDVIYCLSRVIDI 262
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
EPK+ + R A+ Y E+G +A YE+I K P + A + A+ ++ + +++
Sbjct: 263 EPKNYNARFQRAAVYRELGHNGRAVTEYERILKEVPHHPRALRNLAEAYIDLNEVTKAVD 322
Query: 192 ----ILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFS--- 238
+E Y P DA D ++ L + L K L+ + + R
Sbjct: 323 QWTESVEYYKSFEPEDAPDFSWSDANIYAELFSYLGRYEEGLKALKSVSRWLLGRRDDTM 382
Query: 239 -----------------------------------GKELPLKLKVKAGICYLRLGNMEKA 263
G LPL+L++K G+ LR+G K
Sbjct: 383 WENFNEDDREWDANDSPRRIKVDGYIPGRWPRDSYGLGLPLELRIKLGLFRLRMGYDHKN 442
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L W N D+ DL EVAD L +G AL+YY ++ +
Sbjct: 443 EALH-HFSWLNPEDTSEGARLYDYGDLFREVADALKEVGLLEDALRYYTPIQQTTEYADI 501
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPP 374
++ + +C++ L A + D NI++R LA L E+A+ ++
Sbjct: 502 SYFMAMGDCFMQLGNIEEAENCYLTVADYDTRNIESRAQLAKLYESIGMTEQALKYVNEA 561
Query: 375 KDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPE--DFVDAIFPLVCESLCVEALRQ 432
L + + + + + +L +R + PE A+ P E L
Sbjct: 562 VLLGRQETRTHRRR----KDTRLEQLALEFRTETDPELPGLRIAVPPERAEGLAPTLTTT 617
Query: 433 KVKVKRRLTKGILQQRTKI 451
V RR + ++RT++
Sbjct: 618 SVNATRRKVQEAEEERTEL 636
>gi|70990796|ref|XP_750247.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Aspergillus fumigatus Af293]
gi|66847879|gb|EAL88209.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Aspergillus fumigatus Af293]
Length = 1095
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 197/499 (39%), Gaps = 72/499 (14%)
Query: 20 RGRRKGSKNKLSPGVT-KML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P KML +A+ + G++E AI L+K + ++P + ++ L
Sbjct: 143 KGIKRGPRKPLEPSAEFKMLHSDATSAFIDGDYETAIDLVKRAIHINPEMFAAHSLLSEI 202
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQA-----MYYIRQAIRA 131
A G A AH P+D+++W ++ + + GD A +Y + + I
Sbjct: 203 FLAQGQKDKALTALFSGAHTRPRDASVWFKVAQMILDRAGDDRPAALNDVIYCLSRVIDI 262
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
EPK+ + R A+ Y E+G +A YE+I K P + A + A+ ++ + +++
Sbjct: 263 EPKNYNARFQRAAVYRELGHNGRAVTEYERILKEVPHHPRALRNLAEAYIDLNEVTKAVD 322
Query: 192 ----ILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFS--- 238
+E Y P DA D ++ L + L K L+ + + R
Sbjct: 323 QWTESVEYYKSFEPEDAPDFSWSDANIYAELFSYLGRYEEGLKALKSVSRWLLGRRDDTM 382
Query: 239 -----------------------------------GKELPLKLKVKAGICYLRLGNMEKA 263
G LPL+L++K G+ LR+G K
Sbjct: 383 WENFNEDDREWDANDSPRRIKVDGYIPGRWPRDSYGLGLPLELRIKLGLFRLRMGYDHKN 442
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L W N D+ DL EVAD L +G AL+YY ++ +
Sbjct: 443 EALH-HFSWLNPEDTSEGARLYDYGDLFREVADALKEVGLLEDALRYYTPIQQTTEYADI 501
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPP 374
++ + +C++ L A + D NI++R LA L E+A+ ++
Sbjct: 502 SYFMAMGDCFMQLGNIEEAENCYLTVADYDTRNIESRAQLAKLYESIGMTEQALKYVNEA 561
Query: 375 KDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPE--DFVDAIFPLVCESLCVEALRQ 432
L + + + + + +L +R + PE A+ P E L
Sbjct: 562 VLLGRQETKTHRRR----KDTRLEQLALEFRTETDPELPGLRIAVPPERAEGLAPTLTTT 617
Query: 433 KVKVKRRLTKGILQQRTKI 451
V RR + ++RT++
Sbjct: 618 SVNATRRKVQEAEEERTEL 636
>gi|156051156|ref|XP_001591539.1| hypothetical protein SS1G_06985 [Sclerotinia sclerotiorum 1980]
gi|154704763|gb|EDO04502.1| hypothetical protein SS1G_06985 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1096
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 167/410 (40%), Gaps = 60/410 (14%)
Query: 8 GYRKKTRKLNKKRGRRKGSKNKLSP-GVTKM-LGEASLQYAYGNFEQAISLLKEVVRLSP 65
G R+ R ++ +G + P G K+ LG+A+ + G E+A + E++R++
Sbjct: 132 GKRRSARGGKGRKAGIRGPRKAAEPTGDIKLRLGQANQAFLNGRCEEARDIASEIIRINA 191
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV-QKGD-----TA 119
E + L LG + SA +IAA PK W L FA+ + GD
Sbjct: 192 ETYEAWTLLSACFKELGEYNSAVKALMIAATWRPKHPGPWYAALYFALNETGDLRSEFLI 251
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
A Y +Q +RA +D+ R AS +E + AA YE I K P + + +T A +
Sbjct: 252 SAQYAAQQILRANSQDLEARRIKASIMLERRNLNHAAREYEIILKRAPLDTEVVQTLASI 311
Query: 180 FLKCGQTARS----IGILEEYLKVHPSDADLSVIDL-----LVAILMENNAYEKTLQHIE 230
++ GQ + I + ++ K + V D L +L + K L+ +
Sbjct: 312 YVDLGQIEVAMKLYIKTINKFKKADVETDTVLVTDAYAYVELFGLLEKYKDGIKELRSVA 371
Query: 231 HAQIVR----------------------------FSGKELP---------LKLKVKAGIC 253
+ R F K P ++L++K G+
Sbjct: 372 RWLVGRKGEDFWDQFIDDDREWDDDDIRRSECPQFDAKTYPVDTYGPGLPVELRIKLGLY 431
Query: 254 YLRLGNMEKAEILF-----ADLQWKNAIDH-ADLITEVADTLMSLGHSNSALKYYHFLET 307
L LG+ +A F +D + I+ L EV D L G++ AL YY L
Sbjct: 432 RLSLGHYMEALRHFNYLKTSDYNGQGLIEEFPHLFEEVGDNLARKGYNKDALDYYLPLAP 491
Query: 308 NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
AG + L LK+ C+L+ K A + F A+ EDNI AR+ LA L
Sbjct: 492 GAGAEGASLQLKMGNCWLAEKADQEAELCFQNAVQMEEDNIPARMELARL 541
>gi|340514015|gb|EGR44286.1| RNA polymerase III transcription initiation factor complex
[Trichoderma reesei QM6a]
Length = 973
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 168/403 (41%), Gaps = 69/403 (17%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+T L + + + G++ +A+ L+ EV+R++ + + L G H A V
Sbjct: 91 ITARLAKVNQAFLSGDYSKALDLVSEVIRINAETHQAWTALSSIFREQGEHARALSAMVY 150
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQA--MYYIR----QAIRAEPKDISLRIHLASFYV 147
AAHL PK+ + W + FA+ A+A ++ R A+RA+P +I R+ A+
Sbjct: 151 AAHLRPKEVSAWLECAAFALDTIAEAEASNLHTARLCYSAALRADPVNIEARLGKATVCH 210
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL--KCGQTARSIGILE---------EY 196
G A + Y+ + K P +++ + A+ + K ++A I+ E
Sbjct: 211 RQGHLAAAIQEYKFVLKYHPYDLEIVRKLAEACIDNKNTESAVPSAIMAYRRYFDYEIEN 270
Query: 197 LKVHPSDADLSVIDLLVAILMENNAYEKTLQ----------------------------- 227
+H S A I + V ++ Y + +Q
Sbjct: 271 SALHGSTAPWLDIGIYVELIAATGRYAEAIQELKALSRWLVGRVQEHYWDQWQMDDCEWD 330
Query: 228 -------HIEHAQIVRFS----GKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI 276
H+ Q F G LPL L+V+ I LRLG E+A F L W +
Sbjct: 331 EGDERRSHVPQFQDSMFGPELYGLALPLDLRVRLAIYRLRLGEEEEA---FRHLTWLDPD 387
Query: 277 D--HADLITE-------VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSL 327
+ D + E +A + GH A++Y L + L ++L CY ++
Sbjct: 388 NPRTFDFMAEFPFISYDLASEIAKYGHPQRAIRYLELLRATTEEPDATLLVQLGRCYQAM 447
Query: 328 KERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITL 370
+++ A F+ A+D E NIDAR+ LA++ + ++EEA+ L
Sbjct: 448 GQQSTAEECFHAAIDADEYNIDARIELANMYEKAREDEEALIL 490
>gi|307185187|gb|EFN71324.1| General transcription factor 3C polypeptide 3 [Camponotus
floridanus]
Length = 919
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 182/426 (42%), Gaps = 57/426 (13%)
Query: 10 RKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS-PNLP 68
+++T K + R R+K + L P + ++GEA+L+YA G E A + E++R P P
Sbjct: 153 QQRTCKTSNVRQRKK--RRILPPVLQGLMGEANLRYAKGEVELAAKICAEIIRQQVPTAP 210
Query: 69 ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA 128
+ Y TL + + KS ++AAHLSPKD+ W +L +++ D QA+ +A
Sbjct: 211 QPYQTLAMIYENDHPEKS-LQCSLVAAHLSPKDADQWIRLANISLESNDIKQAITCFSKA 269
Query: 129 IRAEPKDISLR-----------------------IH----------------LASFYVEI 149
I+A PKDISL IH LA Y++
Sbjct: 270 IQASPKDISLYEIRAQLQEQNGDKKAYLRGYTRLIHQLEADDGEHILKYAKILAKHYMQE 329
Query: 150 GDYEKAAESYEQIQKLFPD--NVDATKTGAQLFLKCGQTARSIGILEEY--LKVHPSDAD 205
+ +A E+ E I PD ++ +L + Q R + IL +Y ++V +
Sbjct: 330 NNNTQALEAMETIFVKCPDFITLEEVNIMTELLIALKQFNRCLDILVKYTDIQVRYKNKK 389
Query: 206 LSVIDLLVAILME-----NNAYEKTLQHIEHAQIVRFSGKELP----LKLKVKAGICYLR 256
++ +I+ E NN K I+ I ++P + LK K I +
Sbjct: 390 AEQEEITNSIMSEEEEKLNNLKRKATTSIKDQNIDEIESCDVPDNVVVDLKAKFLITLIE 449
Query: 257 LGNMEKAEILFADL-QWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY 315
LG ++ A+ L +N DL ++A+ LM AL L ++
Sbjct: 450 LGYIQIADELLPKFYTHENPEISGDLFLDLAEALMDKKEFQRALVLLDPLVESSNFSLAA 509
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPK 375
++L+ AEC++ + AI + ++ AR+ LA L E ++AI +L
Sbjct: 510 VWLRHAECWVGCNDMDKAIKSYEIVRKLSPQHLGARIALAKLYKEAEHYDKAIEVLYQDP 569
Query: 376 DLDSLD 381
+ D+LD
Sbjct: 570 ESDTLD 575
>gi|270011861|gb|EFA08309.1| hypothetical protein TcasGA2_TC005945 [Tribolium castaneum]
Length = 769
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 176/384 (45%), Gaps = 27/384 (7%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL 81
RR+ +K L P + ++GEA+++YA G+ E A + EV+R P+ E Y L LA
Sbjct: 48 RRQATK--LDPNLKGLMGEANVRYARGDIETAQKMCFEVMRQVPDAYEPY--LTLAQIFE 103
Query: 82 GNHKSAFDFYV-IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
+ ++ Y+ IA+ L P+DS +W +L + +A+ Y +AIRA P+++ L +
Sbjct: 104 NTDSTKYEGYLAIASCLYPQDSGIWCRLAELNIHNEKYKEAVSYYSKAIRASPRNMGLHL 163
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFP-----DNVDATKTGAQLFLKCGQTARSIGILEE 195
+IGD A + + P + ++ K A+ + + +++ +L+
Sbjct: 164 KRLELVEQIGDVRFALACKKHMANKLPRAQHQNIIELCKEVAKHYHEEKNYVKALEVLKI 223
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTLQ-HIEHAQI-----------VRFSGKELP 243
K P ++++++ +L+ + + + L I+H + +P
Sbjct: 224 PFKRIPKRVTQDLVNMMLELLLLTDRFTECLDIFIQHCNFTFEITVNEDNTIAIDSYVMP 283
Query: 244 ----LKLKVKAGICYLRLGNMEKAEILFADL-QWKNAIDHADLITEVADTLMSLGHSNSA 298
+ LKVK +C ++L + L + + +N + DL +VA+ LM+ S A
Sbjct: 284 PSIQIDLKVKFIVCLIKLKSFHLVPPLIDSMIREENVEEIGDLYLDVAEDLMATNMSLEA 343
Query: 299 LKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
LK L + + ++LK AEC + A+ ++ + +++ LA L
Sbjct: 344 LKLLVPLVKSTTYNLAAVWLKYAECLYNCDMLEQAVEAYFTVMTMAPQHVEVLYPLAMTL 403
Query: 359 LEEAKEEEAITLLSPPKDLDSLDM 382
L+ K+ EA+ +LS + LD+
Sbjct: 404 LKLNKKSEALEVLSQDLSTNKLDV 427
>gi|189239898|ref|XP_001810533.1| PREDICTED: similar to general transcription factor 3C polypeptide
3, partial [Tribolium castaneum]
Length = 762
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 176/384 (45%), Gaps = 27/384 (7%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL 81
RR+ +K L P + ++GEA+++YA G+ E A + EV+R P+ E Y L LA
Sbjct: 48 RRQATK--LDPNLKGLMGEANVRYARGDIETAQKMCFEVMRQVPDAYEPY--LTLAQIFE 103
Query: 82 GNHKSAFDFYV-IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
+ ++ Y+ IA+ L P+DS +W +L + +A+ Y +AIRA P+++ L +
Sbjct: 104 NTDSTKYEGYLAIASCLYPQDSGIWCRLAELNIHNEKYKEAVSYYSKAIRASPRNMGLHL 163
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFP-----DNVDATKTGAQLFLKCGQTARSIGILEE 195
+IGD A + + P + ++ K A+ + + +++ +L+
Sbjct: 164 KRLELVEQIGDVRFALACKKHMANKLPRAQHQNIIELCKEVAKHYHEEKNYVKALEVLKI 223
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTLQ-HIEHAQI-----------VRFSGKELP 243
K P ++++++ +L+ + + + L I+H + +P
Sbjct: 224 PFKRIPKRVTQDLVNMMLELLLLTDRFTECLDIFIQHCNFTFEITVNEDNTIAIDSYVMP 283
Query: 244 ----LKLKVKAGICYLRLGNMEKAEILFADL-QWKNAIDHADLITEVADTLMSLGHSNSA 298
+ LKVK +C ++L + L + + +N + DL +VA+ LM+ S A
Sbjct: 284 PSIQIDLKVKFIVCLIKLKSFHLVPPLIDSMIREENVEEIGDLYLDVAEDLMATNMSLEA 343
Query: 299 LKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
LK L + + ++LK AEC + A+ ++ + +++ LA L
Sbjct: 344 LKLLVPLVKSTTYNLAAVWLKYAECLYNCDMLEQAVEAYFTVMTMAPQHVEVLYPLAMTL 403
Query: 359 LEEAKEEEAITLLSPPKDLDSLDM 382
L+ K+ EA+ +LS + LD+
Sbjct: 404 LKLNKKSEALEVLSQDLSTNKLDV 427
>gi|342870105|gb|EGU73402.1| hypothetical protein FOXB_16040 [Fusarium oxysporum Fo5176]
Length = 920
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 173/417 (41%), Gaps = 71/417 (17%)
Query: 20 RGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS 79
RG RK +K + +T L + + + G++ A+ L+ EV+R++ + + TL
Sbjct: 56 RGPRKAAKPR--GDITARLSKVNQAFLSGDYSLALDLVFEVIRINAETHQAWTTLSSIFR 113
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK------GDTAQAMYYIRQAIRAEP 133
G+ + V AAHL PKD W Q +FA++ G+ A A+RA+
Sbjct: 114 EQGDMGKSLSAMVYAAHLRPKDVNGWLQCASFALENVADDEAGNLNTARLCYSAALRADH 173
Query: 134 KDISLRI----------HLASFYVEIGDYEKAAE----SYEQIQKLFPDNVDATKTGAQL 179
+I R+ HLA+ I DY+ E E ++KL VD + A +
Sbjct: 174 TNIDARLGKGLVCHRQGHLAA---AISDYKVVLEHRTYDLEIVRKLAEACVDNKQAEAAV 230
Query: 180 FLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE--------- 230
R ++ ++A I + V + Y++ +Q +
Sbjct: 231 PSAIAAYKRFFDHERTKPQMEITEAPWHDIGIYVELFASTGRYQEAIQESKSLSRWLLGR 290
Query: 231 ----------------------HAQIVRFS---------GKELPLKLKVKAGICYLRLGN 259
A + F+ G+ P L+ + I RLG+
Sbjct: 291 EAEDYWDQWTSDDREWDLDDERRAAVPNFTAGVWSPDTYGQSFPWDLRARLAIYRFRLGD 350
Query: 260 MEKA--EILFAD----LQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDN 313
++A +L+ + L + A D L ++A+ L GH+ A+ YY L G +
Sbjct: 351 EDEAMRHLLWFEPESILTREFAGDFPFLTFDLAEELAHRGHTPLAISYYQILRDLPGDAD 410
Query: 314 GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITL 370
+ L+L CY ++ E A A +F A+D EDNIDAR+ LA++ + +EEEA+ L
Sbjct: 411 ATILLQLGRCYSAVGETATAEEYFLAAIDADEDNIDARIELANMYEKAREEEEALIL 467
>gi|84996545|ref|XP_952994.1| transcription factor [Theileria annulata strain Ankara]
gi|65303990|emb|CAI76369.1| transcription factor, putative [Theileria annulata]
Length = 882
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 178/364 (48%), Gaps = 22/364 (6%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH-KSA 87
KL+P + K+L EA+ Y NFE+A+ LKE++R +P L + ++ LGL + N +A
Sbjct: 65 KLNPELEKLLQEATDLYLSKNFEEAVKKLKELIRRAPGLHDPFHMLGLIYQNEYNDVTTA 124
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR--IHLASF 145
+Y++AAHL P D+ LW+++ + + G+ QA+Y ++ R + I+ + LA
Sbjct: 125 NSYYLLAAHLVPTDTDLWQRIGEMSQESGNLDQAIYCFKKCQRNQEGQINEQAVFALAIC 184
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y+E DYE AA+ + + L P++ ++ F G S+ +L Y S D
Sbjct: 185 YIEKKDYENAAKRFLVLFNLHPNDKLIANELSKCFQMVGDLHSSLLVLTAYFN---STLD 241
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEH-AQIVRFSGKELPLKLKVKAGICYLRLGNMEKAE 264
L +++ ++ + ++ + YE L+ + +LPL+ V I L L E
Sbjct: 242 LEILETILELNVKLSLYEDCLKILNDICTTNNIEANQLPLEHLVYYVISCLNLDKPVDQE 301
Query: 265 ILFADLQWKNAID--HADLITEVADTLMS--LGHSNSALKYYHFLETNAGTDNGYLYLKL 320
+ +L + + I+ +A LI A+ L L S S K + L ++ + LK+
Sbjct: 302 L---NLLYNSQINVKYAFLI---ANHLCPNHLELSVSWFKKAYSLIFSSDQIDVPTTLKI 355
Query: 321 AECYLSLKERAHAIM--FFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS--PPKD 376
++C +++ H + AL+ +N + + LA +LL++ EA LLS D
Sbjct: 356 SKC-ITMDNNHHEFLVKVLRTALESNPNNSELLINLADILLQQGNINEAEELLSKLTLND 414
Query: 377 LDSL 380
LD +
Sbjct: 415 LDKI 418
>gi|238486506|ref|XP_002374491.1| RNA polymerase III transcription factor TFIIIC subunit Tfc4
[Aspergillus flavus NRRL3357]
gi|317144202|ref|XP_001819968.2| RNA polymerase III transcription factor TFIIIC subunit (Tfc4)
[Aspergillus oryzae RIB40]
gi|220699370|gb|EED55709.1| RNA polymerase III transcription factor TFIIIC subunit Tfc4
[Aspergillus flavus NRRL3357]
Length = 1081
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 168/403 (41%), Gaps = 66/403 (16%)
Query: 20 RGRRKGSKNKL--SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L SP + EA+ + G++++AI L+K+ ++++P + ++ L
Sbjct: 135 KGIKRGPRKPLEPSPEFKILHSEATSAFIDGDYDRAIELVKQAIQINPEMFAAHSLLSEI 194
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQA-----MYYIRQAIRA 131
A G+ A AH PKD +W ++ +++ G+ Q+ +Y + I
Sbjct: 195 WLAQGHKDKALTALFSGAHTRPKDPTVWAKVARMILERAGEDRQSALNDVVYCYSRVIDV 254
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI- 190
PK+ ++R A+ Y E+G +AA YE+I K P N A + A++++ +++
Sbjct: 255 NPKNFNVRFQRAAIYRELGYNGRAATEYERILKELPHNARALRHIAEIYIDLNDVQKAVD 314
Query: 191 ---GILEEYLKVHPSDA------DLSVIDLLVAILME-------------------NNAY 222
+E +L + P +A D+++ L L + N+
Sbjct: 315 HWADSVEYFLSLDPEEAPEFSWSDVNIYAELYGYLSQPEKGLWALKTLSRWLLGRKNDTM 374
Query: 223 EKTLQHIEHAQIVRFS-------------------GKELPLKLKVKAGICYLRLGNMEKA 263
+ + V S G LPL+L++K G+ LR+G K
Sbjct: 375 WEDFDEDDREWDVSDSPRRIKADGYEPGRWPRDSYGLGLPLELRIKLGLFRLRMGYQHKD 434
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L W N D+ DL EVAD L +G AL++Y L+ +
Sbjct: 435 EALH-HFGWLNPDDTSEGARLYDYGDLFREVADALKEVGLFEDALRFYMPLQQTEEYADV 493
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
++ +C+ L A + + NI++R+ LA L
Sbjct: 494 SFFMATGDCFRHLDRLEDAENCYLTVAEHDARNIESRVQLAKL 536
>gi|83767827|dbj|BAE57966.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391874326|gb|EIT83232.1| RNA polymerase III transcription factor TFIIIC [Aspergillus oryzae
3.042]
Length = 1088
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 171/405 (42%), Gaps = 70/405 (17%)
Query: 20 RGRRKGSKNKL--SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L SP + EA+ + G++++AI L+K+ ++++P + ++ L
Sbjct: 135 KGIKRGPRKPLEPSPEFKILHSEATSAFIDGDYDRAIELVKQAIQINPEMFAAHSLLSEI 194
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQA-----MYYIRQAIRA 131
A G+ A AH PKD +W ++ +++ G+ Q+ +Y + I
Sbjct: 195 WLAQGHKDKALTALFSGAHTRPKDPTVWAKVARMILERAGEDRQSALNDVVYCYSRVIDV 254
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI- 190
PK+ ++R A+ Y E+G +AA YE+I K P N A + A++++ +++
Sbjct: 255 NPKNFNVRFQRAAIYRELGYNGRAATEYERILKELPHNARALRHIAEIYIDLNDVQKAVD 314
Query: 191 ---GILEEYLKVHPSDA-DLSVIDLLVAILMENNAY----EKTLQHI------------- 229
+E +L + P +A + S D V I E Y EK L +
Sbjct: 315 HWADSVEYFLSLDPEEAPEFSWSD--VNIYAELYGYLSQPEKGLWALKTLSRWLLGRKND 372
Query: 230 ----------------EHAQIVRFSGKE------------LPLKLKVKAGICYLRLGNME 261
+ + ++ G E LPL+L++K G+ LR+G
Sbjct: 373 TMWEDFDEDDREWDVSDSPRRIKADGYEPGRWPRDSYGLGLPLELRIKLGLFRLRMGYQH 432
Query: 262 KAEILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
K E L W N D+ DL EVAD L +G AL++Y L+
Sbjct: 433 KDEALH-HFGWLNPDDTSEGARLYDYGDLFREVADALKEVGLFEDALRFYMPLQQTEEYA 491
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
+ ++ +C+ L A + + NI++R+ LA L
Sbjct: 492 DVSFFMATGDCFRHLDRLEDAENCYLTVAEHDARNIESRVQLAKL 536
>gi|302836846|ref|XP_002949983.1| hypothetical protein VOLCADRAFT_90359 [Volvox carteri f.
nagariensis]
gi|300264892|gb|EFJ49086.1| hypothetical protein VOLCADRAFT_90359 [Volvox carteri f.
nagariensis]
Length = 1294
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
K L V LG+A++ YA +++ AI LL +V++ PN+ + Y+TLGL H A G +
Sbjct: 351 KRGLPEEVVAKLGQANVMYALQDYQPAIELLTQVIKEYPNVSDPYHTLGLLHEANGQPRK 410
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A DF++IAAHLSPKD ALWK+L + + + G QA+Y + +AI D+ A Y
Sbjct: 411 ALDFFMIAAHLSPKDVALWKRLASMSTELGFYRQAVYCLSKAINRNRSDLDAIWDRAVLY 470
Query: 147 VEI 149
++
Sbjct: 471 AQV 473
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%)
Query: 162 IQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
+ + P + + A+L+ + G ++I +LE +L+ +PS DL+ I++L + ME
Sbjct: 556 VGRQRPGDPEVPVMKARLYHQAGAPLKAIAVLEAHLRDYPSHVDLTHINILAELYMERGG 615
Query: 222 YEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADL 281
Y + I+ A V + LPL L VK+G+C G E+A+ + +L + DL
Sbjct: 616 YVEARALIQRAVPVLCPDQALPLDLAVKSGLCLAHTGQWEEADEVLGELLREPVEQFGDL 675
Query: 282 ITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
V L LG + AL Y + L + ++ L+ +L +C+ +L E + + + +
Sbjct: 676 YISVGSALAGLGQYDKALHYLNPLLEHPDFNDLGLWTQLLKCHTALGEVGEGLELYREQM 735
Query: 342 DRFEDN 347
E +
Sbjct: 736 QAMEQS 741
>gi|196008263|ref|XP_002113997.1| hypothetical protein TRIADDRAFT_58003 [Trichoplax adhaerens]
gi|190583016|gb|EDV23087.1| hypothetical protein TRIADDRAFT_58003 [Trichoplax adhaerens]
Length = 939
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 112/208 (53%), Gaps = 5/208 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+N++ +T ++GEA+L A GN +A + KE++R +P+ + Y TL + + G+ +
Sbjct: 176 RNRVPDYLTGLMGEANLCLARGNLTEAEKMCKEIIRQAPHASDPYETLAMIYEENGDEEK 235
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
+IAA+L+ +D++ W L ++++ + QA++ A++A+ +I + A
Sbjct: 236 VVQLQLIAAYLNRRDASQWVHLAQMSLEQDNKKQALWCYNMAVKADHGNIQILNERARLC 295
Query: 147 VEIGDYEKAAESYEQIQKLFP-----DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+++ + + AAE++E I ++ D D +K A+L +T +SI +LE ++HP
Sbjct: 296 IQMDNIKGAAETFEMILRILKTHQGMDYFDYSKQIAKLHHSKKRTEKSIEVLERAFRIHP 355
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHI 229
+ I++L + + Y+ L+ I
Sbjct: 356 EASHPEAINMLAELYVVKKEYKSALELI 383
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 526 LLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEKKEELRSLGAKMAYD 585
++ N+E L + +C AL RY + I +LSM L A +Y
Sbjct: 684 IMTNDEWWALFLKVCLALDKTHRYADLLHI-DLSM-----------------LCASASYL 725
Query: 586 STDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKFIRYLRAKYKDCV 645
+++ + + K I + S++ W + ++ ++ I +H +F L AK +
Sbjct: 726 NSEYDTAYLYIKPICIENSNSMAIWYLFNNIVLKLRDI-----RHIRFCNRLFAKNSSSI 780
Query: 646 PPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
P I++GH ++ ++ A Y+ A+ +P+ PL+ L
Sbjct: 781 PLCILNGHNSVVSGSYKFALADYVFAFCQMPDQPLLAL 818
>gi|157126783|ref|XP_001660944.1| hypothetical protein AaeL_AAEL010607 [Aedes aegypti]
gi|108873154|gb|EAT37379.1| AAEL010607-PA [Aedes aegypti]
Length = 889
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 205/459 (44%), Gaps = 59/459 (12%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
K + KR RR L P + ++G+A+L YA G+ E A L E+VR P E + TL
Sbjct: 155 KTSMKRHRRF-----LPPALQGLMGQANLCYARGDTEMAKKLCLEIVRQMPLAHEPFVTL 209
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
+ K F +IAAHL+P D W ++ + ++G+ +QA+ +AI+ +PK
Sbjct: 210 AQIYETEDPEK-FLQFSLIAAHLNPSDVEQWVRIAEISEERGNLSQALMCYARAIKTDPK 268
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARS 189
+ LR+ + G+ ++A + Y + P V K A+ F + A +
Sbjct: 269 NFDLRMKRVQLLEKKGEEKQAFKCYFAMLPYIPKERGEFLVQTAKRLAKKFHEESNLAAA 328
Query: 190 IGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ------HIEHAQIVRFSGKELP 243
+ ++ P + I+L + +L+ Y K L ++E ++V + P
Sbjct: 329 MDAMDRAYGTVPELFSVEDINLFLELLIATGYYRKALDVLMAHTNVEVHEMVNEEDENDP 388
Query: 244 ----------------LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHA-DLITEVA 286
L + K + + L +++ +++ ++ A D +VA
Sbjct: 389 NAQRGIYTVVIPNDMVLDFRTKLAVVLVHLKCEHLFDMIVSNILTNINVEEAGDCYLDVA 448
Query: 287 DTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
++LM H + ALK L ++ ++L+ A+C ++ + AI+ YK +
Sbjct: 449 ESLMKELHYHYALKLLVPLISSENFSLAAVWLRYADCLRAIGDYNEAIV-AYKKVVSLAQ 507
Query: 347 NIDARLTLASLLLEEAKEEEAITLL--SPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIY 404
++DARLTL++LL ++ K +EA+ L P KD+ ++ +++ + C +
Sbjct: 508 HLDARLTLSALLKQQGKYDEALEALEQDPEKDI--------------MDAELLYERCLML 553
Query: 405 RAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKG 443
+ G ++F+ + F L+ +R V ++ RL G
Sbjct: 554 KEVGRYDEFLSSGFMLL--------MRHCVPLRSRLELG 584
>gi|380024989|ref|XP_003696266.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
polypeptide 3-like [Apis florea]
Length = 888
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 180/416 (43%), Gaps = 49/416 (11%)
Query: 12 KTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS--PNLPE 69
K++ + R +RK K L P + ++GEA+L+YA G+ E A + E++R P+ PE
Sbjct: 131 KSQSAGQVRCKRK--KRTLPPVLQGLMGEANLRYARGDTELAAQICMEIIRQVQVPSAPE 188
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
++TL + + KS F +IAAHLSPKD+ W +L +++ GD QA+ +AI
Sbjct: 189 PFHTLAMIYETDQPEKS-LQFALIAAHLSPKDADQWVRLANMSLESGDIKQAITCYNKAI 247
Query: 130 RAEPKDISL--------------RIHLASFY-----VEIGDYEKAAESYEQIQKLF---P 167
+A PKDI+L R +L F +E D E + + + K +
Sbjct: 248 QANPKDINLYETRARLLDRNGDKRAYLKGFLKLIHQLESEDGEHIIKYAKMLAKQYMEEN 307
Query: 168 DNVDATKTGAQLFLKCGQ--TARSIGILEEYL-KVHPSDADLSVIDLLVAI--------- 215
+N A + +F KC T + I+ E L + L+++ + +I
Sbjct: 308 NNEQALEAMENIFSKCSNFITLEEVNIMTEILIALKKFKRCLNILTIYTSIWVKYKITND 367
Query: 216 -----LMENNAYEKTLQHIEHAQIVRFSGKELP----LKLKVKAGICYLRLGNMEKAEIL 266
++ + + E I +P + LK K I + L M+ E L
Sbjct: 368 EQNPDIITKKCGNEKKEESEDDNIFEIESCGVPDDVVVDLKAKFLITLIELNQMKLVENL 427
Query: 267 FADLQ-WKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYL 325
++N DL ++A+ LM AL L + ++L+ AEC++
Sbjct: 428 LPKFYLYENQEISGDLFLDIAEALMGKKEFGHALMLLEPLVNSENYSLAAVWLRHAECWV 487
Query: 326 SLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
K+ AI + ++ AR LA L + + +AI +L+ + D+LD
Sbjct: 488 GCKDIKKAIKSYEVVKKLSPQHLGARTALAKLYQLKGQYNKAIEVLNQDPESDTLD 543
>gi|440636467|gb|ELR06386.1| hypothetical protein GMDG_02103 [Geomyces destructans 20631-21]
Length = 915
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 167/394 (42%), Gaps = 68/394 (17%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+A L++EV+R++ E + L LG+ + AAHL PKD+ W
Sbjct: 59 EEAKLLVEEVIRINAETHEAWTLLASIFRELGDIDKTLLTLIYAAHLRPKDATQWLSAAR 118
Query: 111 FAVQK-GD-----TAQAMYYIRQAIRAEPK-DISLRIHLASFYVEIGDYEKAAESYEQIQ 163
FA+++ GD A + AIRA PK D R A E+G A Y I
Sbjct: 119 FALEETGDHRSKNLPSAKFCFSSAIRANPKNDFEARCGKAEVLREMGSTSAAIVEYRHIL 178
Query: 164 KLFP----------------DNVDA-----------------------TKTGAQLFLKC- 183
K P DNV A T + ++++
Sbjct: 179 KQRPHDTSILRLISEAYIDKDNVKAALDLYSEAIDFYKASDSQPGEKFTWSDVNIYVELH 238
Query: 184 ---GQTARSIGILEEYLK-VHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQ----IV 235
GQ A ++ L+ + + +++L D+L ++ + + H Q +
Sbjct: 239 AYLGQYADAVKELKSLSRWILGRESELYWDDVLDDDREWDSDDNRRILHPSFCQGKYGLY 298
Query: 236 RFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQW---------KNAIDHADLITEVA 286
++ G+ LP++L+VK G+ LRLG +A + L W +D+ DL E A
Sbjct: 299 QY-GEGLPMELRVKLGLYRLRLGFHAEA---LSHLHWLGPENEYFADRVLDYPDLFHESA 354
Query: 287 DTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
D+L G AL +Y L + ++ LYL++ +CYL+ K A F +A+ +D
Sbjct: 355 DSLYQAGLPEEALVFYRALRAVSSQEDASLYLQMGKCYLNGKRNREAEESFQQAIILDQD 414
Query: 347 NIDARLTLASLLLEEAKEEEAITLLSPPKDLDSL 380
NIDAR+ LA L E ++E+A ++ +L L
Sbjct: 415 NIDARVHLAKLYEELNEQEQAFIYVNEIMNLRRL 448
>gi|328781790|ref|XP_001122295.2| PREDICTED: general transcription factor 3C polypeptide 3-like [Apis
mellifera]
Length = 886
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 180/420 (42%), Gaps = 57/420 (13%)
Query: 12 KTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS--PNLPE 69
K++ + R +RK K L P + ++GEA+L+YA G+ E A + E++R P+ PE
Sbjct: 129 KSQSAGQVRCKRK--KRTLPPVLQGLMGEANLRYARGDTELAAQICMEIIRQVQVPSAPE 186
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
++TL + + KS F +IAAHLSPKD+ W +L +++ GD QA+ +AI
Sbjct: 187 PFHTLAMIYETDQPEKS-LQFALIAAHLSPKDADQWVRLANMSLESGDIKQAITCYNKAI 245
Query: 130 RAEPKDISL--------------RIHLASF-------------------------YVEIG 150
+A PKDI+L R +L F Y+E
Sbjct: 246 QANPKDINLYETRARLLDRNGDKRAYLKGFLKLIHQLEPEDGEHIIKYAKMLAKQYMEEN 305
Query: 151 DYEKAAESYEQIQKLFPD--NVDATKTGAQLFLKCGQTARSIGILEEYL------KVHPS 202
+ E+A E+ E I + ++ ++ + + R + IL Y K+ +
Sbjct: 306 NNEQALEAMENIFSKCSNFITLEEVNIMTEILIALKKFKRCLNILTIYTNIWVKYKITNN 365
Query: 203 DADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEK 262
+ + +I + + + + IE + ++ + LK K I + L M+
Sbjct: 366 EQNTDIITKKCGNEKKEESEDDNVFEIESCGV----PDDVVVDLKAKFLITLIELNQMKL 421
Query: 263 AEILFADLQ-WKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLA 321
E L ++N DL ++A+ LM AL L + ++L+ A
Sbjct: 422 IENLLPKFYLYENQEISGDLFLDIAEALMGKKEFGHALMLLEPLVNSENYSLAAVWLRHA 481
Query: 322 ECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
EC++ K+ AI + ++ AR LA L + + +AI +L+ + D+LD
Sbjct: 482 ECWVGCKDIKKAIKSYEVVKKLSPQHLGARTALAKLYQLKGQYNKAIEVLNQDPESDTLD 541
>gi|327354434|gb|EGE83291.1| transcription factor tfiiic complex subunit sfc4 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1093
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 71/413 (17%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 143 KGIKRGPRKPLEPSLEFKNLHSEATSAFIDADYERATVLVKQAIQINPEMFAAHSLLSEI 202
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD ++W ++ +++ D A+ Y + I
Sbjct: 203 FLAQGQEDKALAALFSGAHTRPKDPSVWMKVAKLILERAGEDRTSALQDVIYCYSRVIEI 262
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R A+ Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 263 DQKNYDIRFERAAVYRELGHNGKAAQEYERLLKDLPHNTTALRLLAETYIDLNEVDKAKS 322
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTLQHIE-------------- 230
+E + + S D S +++ V N YE+ + ++
Sbjct: 323 RYDESIAYYMSLSLEEATDFTWSDVNIYVEFFGYLNDYEQGIFMLKSLSRWLLGRKEDAE 382
Query: 231 ------------------HAQIVRFS---------GKELPLKLKVKAGICYLRLGNMEKA 263
A I F G LPL+L+VK GI L+LG +
Sbjct: 383 WDNIVEDDREFDAEDSPRRADITFFVPNQYPIEVYGAGLPLELRVKLGIYRLKLGLQYRE 442
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL EV D L AL++Y L+ +
Sbjct: 443 EAL-SHFSWLNPDDSSEGALLYDFGDLFREVGDALKDAKLYQDALQFYVPLQRTREYADT 501
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL-----LLEEA 362
L++ +AECY++ + A + ++ E++I+AR LA L+E+A
Sbjct: 502 SLFMSMAECYIACENDEAAENCYLTVVEYDENDIEARAKLAKFYENLGLIEQA 554
>gi|388852248|emb|CCF54059.1| related to transcription factor TFIIIC subunit [Ustilago hordei]
Length = 1321
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
K+R RR+ + LS V +L + +L Y AI L+EV+R+ PN+ +NTLGL
Sbjct: 221 KRRVRRRAHEQPLSSEVQALLADVNLAYVENRLRDAIPKLEEVIRIEPNVMAAWNTLGLI 280
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
+ LG + + +I AHL P+ + WK L ++++ QA+Y +QAI+ + DI
Sbjct: 281 YEELGEEEKSIQCRIIGAHLQPRATQEWKSLAYRSIKQNLYRQAIYCFQQAIKIDKTDID 340
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
A ++GDY+ A I KL P + + + + R I +LE +
Sbjct: 341 SIWDRALLLRDLGDYKAAINGMLDILKLQPYDASVVRELVPMLVSTRDYDRGIEVLERWR 400
Query: 198 KVHPSDADLSVIDLLVAILMENNAYEKT 225
K D L+ +EN + T
Sbjct: 401 KSSMGRYPNPTTDGLLDPALENVTGQST 428
>gi|239609335|gb|EEQ86322.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 1060
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 71/413 (17%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 110 KGIKRGPRKPLEPSLEFKNLHSEATSAFIDADYERATVLVKQAIQINPEMFAAHSLLSEI 169
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD ++W ++ +++ D A+ Y + I
Sbjct: 170 FLAQGQEDKALAALFSGAHTRPKDPSVWMKVAKLILERAGEDRTSALQDVIYCYSRVIEI 229
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R A+ Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 230 DQKNYDIRFERAAVYRELGHNGKAAQEYERLLKDLPHNTTALRLLAETYIDLNEVDKAKS 289
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTLQHIE-------------- 230
+E + + S D S +++ V N YE+ + ++
Sbjct: 290 RYDESIAYYMSLSLEEATDFTWSDVNIYVEFFGYLNDYEQGIFMLKSLSRWLLGRKEDAE 349
Query: 231 ------------------HAQIVRFS---------GKELPLKLKVKAGICYLRLGNMEKA 263
A I F G LPL+L+VK GI L+LG +
Sbjct: 350 WDNIVEDDREFDAEDSPRRADITFFVPNQYPIEVYGAGLPLELRVKLGIYRLKLGLQYRE 409
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL EV D L AL++Y L+ +
Sbjct: 410 EAL-SHFSWLNPDDSSEGALLYDFGDLFREVGDALKDAKLYQDALQFYVPLQRTREYADT 468
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL-----LLEEA 362
L++ +AECY++ + A + ++ E++I+AR LA L+E+A
Sbjct: 469 SLFMSMAECYIACENDEAAENCYLTVVEYDENDIEARAKLAKFYENLGLIEQA 521
>gi|157130184|ref|XP_001655630.1| hypothetical protein AaeL_AAEL011694 [Aedes aegypti]
gi|108871987|gb|EAT36212.1| AAEL011694-PA [Aedes aegypti]
Length = 732
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 203/455 (44%), Gaps = 59/455 (12%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KR RR L P + ++G+A+L YA G+ E A L E+VR P E + TL +
Sbjct: 2 KRHRRF-----LPPALQGLMGQANLCYARGDTEMAKKLCLEIVRQMPLAHEPFVTLAQIY 56
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
K F +IAAHL+P D W ++ + ++G+ +QA+ +AI+ +PK+ L
Sbjct: 57 ETEDPEKF-LQFSLIAAHLNPSDVEQWVRIAEISEERGNLSQALMCYARAIKTDPKNFDL 115
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGIL 193
R+ + G+ ++A + Y + P V K A+ F + A ++ +
Sbjct: 116 RMKRVQLLEKKGEEKQAFKCYFAMLPYIPKERGEFLVQTAKRLAKKFHEESNLAAAMDAM 175
Query: 194 EEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ------HIEHAQIVRFSGKELP---- 243
+ P + I+L + +L+ Y K L ++E ++V + P
Sbjct: 176 DRAYGTVPELFSVEDINLFLELLIATGYYRKALDVLMAHTNVEVHEMVNEEDENDPNAQR 235
Query: 244 ------------LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHA-DLITEVADTLM 290
L + K + + L +++ +++ ++ A D +VA++LM
Sbjct: 236 GIYTVVIPNDMVLDFRTKLAVVLVHLKCEHLFDMIVSNILTNINVEEAGDCYLDVAESLM 295
Query: 291 SLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
H + ALK L ++ ++L+ A+C ++ + AI+ YK + ++DA
Sbjct: 296 KELHYHYALKLLVPLISSENFSLAAVWLRYADCLRAIGDYNEAIV-AYKKVVSLAQHLDA 354
Query: 351 RLTLASLLLEEAKEEEAITLL--SPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKG 408
RLTL++LL ++ K +EA+ L P KD+ ++ +++ + C + + G
Sbjct: 355 RLTLSALLKQQGKYDEALEALEQDPEKDI--------------MDAELLYERCLMLKEVG 400
Query: 409 MPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKG 443
++F+ + F L+ +R V ++ RL G
Sbjct: 401 RYDEFLSSGFMLL--------MRHCVPLRSRLELG 427
>gi|358399037|gb|EHK48380.1| hypothetical protein TRIATDRAFT_129909 [Trichoderma atroviride IMI
206040]
Length = 959
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 171/426 (40%), Gaps = 72/426 (16%)
Query: 13 TRKLNKKRGRRKGSKNKLSPG-VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETY 71
TR + + RG R K G +T L + + + G++E+A+ L+ EV+R++ + +
Sbjct: 54 TRGVFRGRGVRGPRKAAKPRGDITARLAKVNQAFLGGDYEKALDLVSEVIRINAETHQAW 113
Query: 72 NTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV------QKGDTAQAMYYI 125
L G + A V AAHL PK+ A W + + A+ + G+ A
Sbjct: 114 TALSSIFREQGENARALSAMVYAAHLRPKNVAAWLECASCALDSLHEDEAGNLHTARLCY 173
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL--KC 183
A+RA+P ++ R+ AS G A Y + K P ++D + A+ + K
Sbjct: 174 SAALRADPTNLDARLGKASVCHRQGHLAAAISEYNIVLKHHPYDLDIVRKLAEACIDNKN 233
Query: 184 GQTARSIGIL--EEYLK-------VHPSDADLSVIDLLVAILMENNAYEKTLQ------- 227
++A I+ Y ++ D I + V ++ A+ + +
Sbjct: 234 AESAVPAAIMAYRRYFDYEMGNSPMYGPDGPWHDIGIYVELIASTGAFAEAIHELKALSR 293
Query: 228 -----------------------------HIEHAQIVRFS----GKELPLKLKVKAGICY 254
H+ H Q F G LPL L+V+ I
Sbjct: 294 WLVGRVQEQYWDQWQVDDCEWDDDDDRRSHVPHFQGSLFGPELYGHALPLDLRVRLVIYR 353
Query: 255 LRLGNMEKAEILFADLQWKNAIDH---ADLITE-------VADTLMSLGHSNSALKYYHF 304
LRLG ++A F L W + DH D + E +A L A++Y
Sbjct: 354 LRLGEGDEA---FRHLAWLDP-DHPRTVDFLAEFPFVSYDLASELAKYDEPQRAIRYLEL 409
Query: 305 LETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKE 364
L + L + L CYL+ ++ A F+ A+D E NIDAR+ LA++ + ++
Sbjct: 410 LRATTEEPDAVLLVLLGRCYLATGLQSTAEECFHAAIDAEEYNIDARIELANMYEKARED 469
Query: 365 EEAITL 370
EEA+ L
Sbjct: 470 EEALIL 475
>gi|261188352|ref|XP_002620591.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239593191|gb|EEQ75772.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 1060
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 71/413 (17%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 110 KGIKRGPRKPLEPSLEFKNLHSEATSAFIDADYERATVLVKQAIQINPEMFAAHSLLSEI 169
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD ++W ++ +++ D A+ Y + I
Sbjct: 170 FLAQGQEDKALAALFSGAHTRPKDPSVWMKVAKLILERAGEDRTSALQDVIYCYSRVIEI 229
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R A+ Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 230 DQKNYDIRFERAAVYRELGHNGKAAQEYERLLKDLPHNTTALRLLAETYIDLNEVDKAKS 289
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTLQHIE-------------- 230
+E + + S D S +++ V N YE+ + ++
Sbjct: 290 RYDESIAYYMSLSLEEATDFTWSDVNIYVEFFGYLNDYEQGIFMLKSLSRWLLGRKEDAE 349
Query: 231 ------------------HAQIVRFS---------GKELPLKLKVKAGICYLRLGNMEKA 263
A I F G LPL+L+VK GI L+LG +
Sbjct: 350 WDNIVEDDREFDAEDSPRRADITFFVPNQYPIEVYGAGLPLELRVKLGIYRLKLGLQYRE 409
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL EV D L AL++Y L+ +
Sbjct: 410 EAL-SHFSWLNPDDSSEGALLYDFGDLFREVGDALKDAKLYQDALQFYVPLQRTREYADT 468
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL-----LLEEA 362
L++ +AECY++ + A + ++ E++I+AR LA L+E+A
Sbjct: 469 SLFMSMAECYIACENDEAAENCYLTVVEYDENDIEARAKLAKFYENLGLIEQA 521
>gi|195122536|ref|XP_002005767.1| GI18897 [Drosophila mojavensis]
gi|193910835|gb|EDW09702.1| GI18897 [Drosophila mojavensis]
Length = 902
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 192/442 (43%), Gaps = 43/442 (9%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
G G +++LS + ++GEA+L +AYG F+ A + E++R +P E + TL +
Sbjct: 153 GGSLGRRSQLSAALMGLMGEANLSFAYGRFDVAERICMEIIRQNPLASEPFYTLAEIYEN 212
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
K F IAAHL+P+D +W ++ VQ+G +A +AIR PK+ LR
Sbjct: 213 RDEVK-FLHFSTIAAHLNPQDRDMWIRISDLLVQQGHLTRARICYTKAIRVLPKEYLLRQ 271
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEE 195
A +G+ A +Y ++ L P + + K A+ F + + + ++ +E
Sbjct: 272 RKAQLLERMGETNAAMFTYLKMLPLMPSSEWSLCLSTGKNVARYFHELKKHSLALEAMEG 331
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKL--------- 246
V +++ + +L+ N Y K L+ + + ++ L+L
Sbjct: 332 TYGVCGDRFTNEDLNIYLELLILNKQYIKVLRCLRERTKLELETEQESLELIYFCQIPDD 391
Query: 247 ---KVKAGICYLRLGNMEKAEILFADLQ-----WKNAIDHADLITEVADTLMSLGHSNSA 298
+++A +C + L +M +L +Q +D +L ++ + LM A
Sbjct: 392 YVPELRAKLC-VSLIHMHAHHLLGYIVQNVQEYITPTVDRVELYMDITEALMQEHKYAEA 450
Query: 299 LKYYHFLETNAGTD-NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
+ + + D +++L+ AEC L AI + + + +A+ TL++L
Sbjct: 451 IALMRPITDSDSFDCPAFVWLRHAECLRQLNRTQEAIQSYERVVQLAPYCYEAKFTLSAL 510
Query: 358 LLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAI 417
L ++ + EEA+ L S + L+ +++ + C + + ++F+D
Sbjct: 511 LKQQGRPEEAVKALE----------QSGEQEGQPLHARLLYERCIMLQQINRIDEFLDVG 560
Query: 418 FPLVCESLCVEALRQKVKVKRR 439
+ L+ R +K+K R
Sbjct: 561 YVLLS--------RHSIKLKNR 574
>gi|46121997|ref|XP_385552.1| hypothetical protein FG05376.1 [Gibberella zeae PH-1]
Length = 934
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 176/429 (41%), Gaps = 70/429 (16%)
Query: 5 NYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS 64
N G R K RG RK +K + +T L + + + G++ A+ L+ EV+R++
Sbjct: 49 NRSGLRGKG-----ARGPRKAAKPR--GDITARLSKVNQAFLSGDYSLALDLVFEVIRIN 101
Query: 65 PNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK------GDT 118
+ + TL G+ + V AAHL PKD W + +FA++ G+
Sbjct: 102 AETHQAWTTLASIFGEQGDMSKSLSAMVYAAHLRPKDVNGWLRCASFALENTSDDEAGNL 161
Query: 119 AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQ 178
A A+RA+ ++ R+ G A Y+ + K P +++ + A+
Sbjct: 162 NTARLCYSAALRADHTNLDARLGKGLVCHRQGHLAAAISDYKVVLKHRPYDLEIVRKLAE 221
Query: 179 LFLKCGQ----TARSIGILEEYLKVHPSDADLSVID-------LLVAILMENNAYEKTLQ 227
+ Q +I + + + L +I+ + V + Y+ +Q
Sbjct: 222 ACVDNKQAEAAVPSAIAAYKRFFDHEKKETSLEMIESPWTDIGIYVELFASTGRYQDAIQ 281
Query: 228 HIEH-AQIV------------------------RFSG---------------KELPLKLK 247
+ A+ V R +G + PL L+
Sbjct: 282 EAKALARWVLGRESEGYWNNWHSDDREWDMDDERRTGVPEFRAGLWSTDLYGRSFPLDLR 341
Query: 248 VKAGICYLRLGNMEKA--EILFADLQWKNAIDHAD----LITEVADTLMSLGHSNSALKY 301
+ I RLG+ E+A + + D + D A+ L ++A+ L GH+ A+ Y
Sbjct: 342 ARLAIYRFRLGDEEEAMKHLWWFDPESVITRDFANEFPFLTFDLAEELAHRGHTPLAISY 401
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
YH L G + + L+L C+ ++ E A A +F A+D EDNIDAR+ LA++ +
Sbjct: 402 YHVLRDLPGDADATILLQLGRCHSAIGENATAEEYFLAAIDADEDNIDARIELANMYEKA 461
Query: 362 AKEEEAITL 370
+EEEA+ L
Sbjct: 462 REEEEALIL 470
>gi|213404588|ref|XP_002173066.1| transcription factor tau subunit sfc4 [Schizosaccharomyces
japonicus yFS275]
gi|212001113|gb|EEB06773.1| transcription factor tau subunit sfc4 [Schizosaccharomyces
japonicus yFS275]
Length = 1001
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 167/411 (40%), Gaps = 59/411 (14%)
Query: 7 GGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSP 65
G+R RK RGRR S V +L A+ +A GNFE+A L +E+VR+
Sbjct: 99 AGFRSSQRK---GRGRRSRVDMPPSLEVQSLLSRANHAFAQEGNFEEAQRLAEEIVRIDN 155
Query: 66 NLPETYNTLGLAHSALGNHKSAFD----FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
N+ + LG H GN + + ++ AAHL P+D LW + G QA
Sbjct: 156 NMIAAWKMLGECHRQKGNERVNIEKCLIAWMAAAHLKPRDHELWATCARLSESLGFWEQA 215
Query: 122 MYYIRQAIRAEPKDISLRIHL----ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGA 177
Y AI+A+P ++ I A E Y+KA E ++ + P + A
Sbjct: 216 DYCYNHAIQAKPSEVDKLIEYIWDRAILNQEHERYKKAIEGFQNLLNYLPHDSSVLHHLA 275
Query: 178 QLFLKCGQTARSIGILE---EYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQH 228
+++++ + +I + E + +PS D S ++ +L + + + +
Sbjct: 276 EIYIELKEPREAIKLYEAAWNHFYRYPSPPVGQGVFDWSSLNAYAGLLYSDEQWHELIVL 335
Query: 229 IEH-AQIVRFSGKE-----------------------------------LPLKLKVKAGI 252
I+ A+ +R E LP L+ K GI
Sbjct: 336 IKRGARWLRGRKTETHWDEIDDDREWDLDEKRRKFPSSNLYEQPENAFVLPFNLRAKLGI 395
Query: 253 CYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
L++G++ +A + F L+ + ++ E+A+ +S+ + AL YY L
Sbjct: 396 ARLKIGDLAEATLHFDILKSLPITETVFILFEIAEAAISVDLYDLALSYYLILNKFEPAC 455
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL--LLEE 361
N LY + CY LKE A L NIDA + LA + LLE+
Sbjct: 456 NERLYYSMGICYKELKEYTSAEECLLVTLMLNNRNIDAMVRLAEIYELLED 506
>gi|350638018|gb|EHA26374.1| hypothetical protein ASPNIDRAFT_46707 [Aspergillus niger ATCC 1015]
Length = 1023
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 172/415 (41%), Gaps = 68/415 (16%)
Query: 20 RGRRKGSKNKL--SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G R+G + L SP + EA+ + G++++AI L K ++++P + ++ L
Sbjct: 121 KGIRRGPRKPLEPSPEFKILHSEATSAFIDGDYDRAIDLTKRAIQVNPEMFAAHSLLSEI 180
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK------GDTAQAMYYIRQAIRA 131
A G A AH PKD +W ++ +++ G +Y + I
Sbjct: 181 FLAQGEKDKALTALFSGAHTRPKDPTVWAKVARMILERAGEERQGALNDVIYCYSRIIEL 240
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+PK+ + R A+ Y E+G +AA YE+I K P N A + A+ ++ +++
Sbjct: 241 DPKNYNARFQRAAIYRELGYNGRAATEYERILKEVPHNARALRHLAETYIDLNDVQKAVD 300
Query: 192 ----ILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQHI------------ 229
++ + + P DA D+++ L + L K L+ +
Sbjct: 301 QWRVSVKHFTSLEPEDAPEFSWSDVNIYAELYSYLGRPFEGLKALKSVSRWLLGRKDDTM 360
Query: 230 --------------EHAQIVRFSGKE------------LPLKLKVKAGICYLRLGNMEKA 263
+ + ++ G E LPL+L++K + LR+G K
Sbjct: 361 WEDFHEDDREWDADDSPRRIKADGYEPRRWPRDSYGLGLPLELRIKLALFRLRMGYEHKN 420
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFL-ETNAGTDN 313
E L L+W N D+ DL E AD L +G AL++Y L +TN D
Sbjct: 421 EALH-HLEWLNPEDTSEHARLYDYGDLFREAADALKDVGLFEEALRFYMPLQQTNEYADV 479
Query: 314 GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
G+ ++ + EC L + A F + ++++R+ LA L EEA+
Sbjct: 480 GF-FMAMGECCSVLGKLEDAENCFLTVAEHDARHVESRVQLAKLYEGIGMSEEAL 533
>gi|408391152|gb|EKJ70534.1| hypothetical protein FPSE_09287 [Fusarium pseudograminearum CS3096]
Length = 934
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 172/429 (40%), Gaps = 70/429 (16%)
Query: 5 NYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS 64
N G R K RG RK +K + +T L + + + G++ A+ L+ EV+R++
Sbjct: 49 NRSGLRGKG-----TRGPRKAAKPR--GDITARLSKVNQAFLSGDYSLALDLVFEVIRIN 101
Query: 65 PNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK------GDT 118
+ + TL G+ + V AAHL PKD W + +FA++ G+
Sbjct: 102 AETHQAWTTLASIFGEQGDMSKSLSAMVYAAHLRPKDVNGWLRCASFALENTSDDEAGNL 161
Query: 119 AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQ 178
A A+RA+ ++ R+ G A Y+ + K P +++ + A+
Sbjct: 162 NTARLCYSAALRADHTNLDARLGKGLVCHRQGHLAAAISDYKVVLKHRPYDLEIVRKLAE 221
Query: 179 LFLKCGQ----TARSIGILEEYLKVHPSDADLSVID-------LLVAILMENNAYEKTLQ 227
+ Q +I + + + L I+ + V + Y+ +Q
Sbjct: 222 ACVDNKQAEAAVPSAIAAYKRFFDHEKKETSLERIESPWTDIGIYVELFASTGRYQDAIQ 281
Query: 228 HIE-------------------------------HAQIVRFSG---------KELPLKLK 247
+ A + F + PL L+
Sbjct: 282 EAKALARWVLGRESEEYWNNWHSDDREWDMDDERRAGVPEFRAGLWSTDMYGRSFPLDLR 341
Query: 248 VKAGICYLRLGNMEKA--EILFADLQWKNAIDHAD----LITEVADTLMSLGHSNSALKY 301
+ I RLG+ E+A + + D + D A+ L ++A+ L GH+ A+ Y
Sbjct: 342 ARLAIYRFRLGDEEEAMKHLWWFDPESVITRDFANEFPFLTFDLAEELAHRGHTPLAISY 401
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
YH L G + + L+L C+ ++ E A A +F A+D EDNIDAR+ LA++ +
Sbjct: 402 YHVLRDLPGDVDATILLQLGRCHSAIGENATAEEYFLAAIDADEDNIDARIELANMYEKA 461
Query: 362 AKEEEAITL 370
+EEEA+ L
Sbjct: 462 REEEEALIL 470
>gi|388581639|gb|EIM21946.1| TPR-like protein [Wallemia sebi CBS 633.66]
Length = 1033
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 169/422 (40%), Gaps = 55/422 (13%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNK---LSPGVTKMLGEASLQYAYGNFEQAISLLK 58
E+I++ R + R + RRK K++ L P + ++G+A++ Y F+ AI ++
Sbjct: 115 EMIDFSDIRDELRGASGVGKRRKKLKDRTQVLPPEIRDLIGQANVHYVLNEFDAAIEKIE 174
Query: 59 EVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDT 118
+V+ P + + +G H ++ VIAA + P DS +WK L + +G T
Sbjct: 175 QVLTTFPEAKSAWTLAASIKTDMGEHDASLRLRVIAALIPPCDSDVWKDLAGESRSQGAT 234
Query: 119 AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQ 178
QA+Y + QAI+ D + Y ++G Y ++ ++ + K F + +
Sbjct: 235 QQAVYCLSQAIKYNKYDFDAIWDRSVLYKQLGIYRQSINGFKNLLKFFNHDPNVLNELCP 294
Query: 179 LFLKCGQTARSIGILE---EYLKVH-----PSDADLSVID---LLVAILM---------- 217
+ L G ++ EY + H P D L++ L+ + LM
Sbjct: 295 ILLDTGDYVEIDKLMTNAWEYYQEHFPEPEPDDTGLNINHFKYLVTSQLMLRRYHDAIAV 354
Query: 218 --------------------------ENNAYEKTLQH-IEHAQIVRFSGKELPLKLKVKA 250
+ N +E+ H IE V EL +++
Sbjct: 355 IKQSTRWLQGRHQDTFWDLLPDDREFDENRFERVGDHRIEFGMGVF----ELDPDMRISL 410
Query: 251 GICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAG 310
G L LG ++A+ F+ + + + L EV ++ M AL+ + +E N
Sbjct: 411 GQARLELGERDEAKRHFSHVLKLDLEANVALYGEVGNSFMKHEMFEDALEVFKVMEDNER 470
Query: 311 TDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITL 370
T + +Y LA C+ +L A F DN+D + LA K E+A+
Sbjct: 471 TCSTPVYRNLAVCHKALNNLDMAEQIFEHVCQLEPDNMDVTMQLAETYEALGKREQALAT 530
Query: 371 LS 372
+S
Sbjct: 531 IS 532
>gi|71003626|ref|XP_756479.1| hypothetical protein UM00332.1 [Ustilago maydis 521]
gi|46096084|gb|EAK81317.1| hypothetical protein UM00332.1 [Ustilago maydis 521]
Length = 1284
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 16 LNKKRG-RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
+KRG RRK + LSP V +L +A+L Y AI L+EV+R+ PN+ +NTL
Sbjct: 220 FKQKRGTRRKAREQPLSPEVQALLADANLAYVEQRLYDAIPKLEEVIRIEPNVKAAWNTL 279
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
GL + +G + + +I AHL S WK L ++ + QA+Y +QAIR +
Sbjct: 280 GLIYEEVGEEEKSIQCRIIGAHLQSGASEEWKSLAYRSIAQMLYRQAIYCFQQAIRIDKT 339
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
DI A ++GDY+ A I KL P + + + + R I ILE
Sbjct: 340 DIDSIWDRALLLRDLGDYKAAINGMFDILKLQPYDASVVRELIPILVSTRDYDRGIEILE 399
Query: 195 EYLK 198
+ K
Sbjct: 400 RWRK 403
>gi|429329481|gb|AFZ81240.1| tetratricopeptide repeat domain-containing protein [Babesia equi]
Length = 922
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 103/188 (54%), Gaps = 6/188 (3%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH-SALGNHKS 86
+KL P + K++ EA+ Y F++A+ LLKE+VR +P L + ++TLGL + + +
Sbjct: 93 SKLKPELEKLMQEATNFYLDKKFDEAVKLLKEIVRRAPGLHDPFHTLGLIYEEEYKDLVT 152
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH--LAS 144
A +Y++AAHL P D LW ++ + G+ QA+Y ++ ++ +I+ ++ LA
Sbjct: 153 ATSYYLLAAHLVPTDIYLWHRIGEMSQNIGNIDQAIYCFKKCLKDAYGEINEEVYFSLAI 212
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
YVE DY A + + + +L P+++ T ++ F G S+ +L Y K+
Sbjct: 213 CYVEKKDYNNAIKKFTVLFQLHPEDILVTTELSKCFQAIGDLNSSLIVLTAYFKL---TF 269
Query: 205 DLSVIDLL 212
D+ ++D +
Sbjct: 270 DMKIVDTI 277
>gi|321477152|gb|EFX88111.1| hypothetical protein DAPPUDRAFT_42693 [Daphnia pulex]
Length = 711
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 159/356 (44%), Gaps = 25/356 (7%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+GEA+L+YA G + A+ L KEV+R +P+ E + TL + + G+ + ++ +IAA+L
Sbjct: 1 MGEANLRYARGEKKDAMDLCKEVIRQAPSYAEPFQTLSMFYEDQGDFEKSYQLSLIAAYL 60
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P+++ W +L + + D QAM + +A++A+P ++ + + + IG ++ +
Sbjct: 61 APQEADEWLRLAEVCLNRRDEVQAMKCLAKAVQADPTNLQIHQYRCNVLESIGAEKEQLK 120
Query: 158 SY-EQIQKLFPDN-------VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
++ ++ + P++ V+ + A+++ G + L L + +
Sbjct: 121 AFLSMLRGVQPEDEQKKNEWVELAEKIARMYFASGHLHSARRALSNALVTCADNFKMEHF 180
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSG-----------------KELPLKLKVKAGI 252
+LL+ + + Y ++ + + F+ KELPL + K I
Sbjct: 181 NLLLELQISTKHYLDVIKTLNRHCGLVFNNKIIDEIDLEETESMELTKELPLDILSKLCI 240
Query: 253 CYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
+ E A L + D+ +VA+ L+ AL L +
Sbjct: 241 ALVYSNKQEFAFPLIETFMEHDVERFGDIYLDVAEALVEKEFHQQALTLLEVLTQSKSFS 300
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
++LK A C +L AI+ F + + DAR++LA LL + + E+A+
Sbjct: 301 QAAVWLKYANCLNALNRADEAIVAFRHVIHLVPSSEDARISLAELLTKLGRHEDAL 356
>gi|403174180|ref|XP_003333177.2| hypothetical protein PGTG_14724 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170863|gb|EFP88758.2| hypothetical protein PGTG_14724 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1117
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 1/189 (0%)
Query: 14 RKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNT 73
R +KR + +G + +LS V+ +LG+A+L + +++AI + +E+VR+ P +N
Sbjct: 168 RPGKRKRFKLRG-EPELSVEVSVLLGKANLAFIEKKYDEAIPVFEEIVRIEPMCRMAWNN 226
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
LG + +G+ + + F +I AHL+PK + +WK+L + + Q G +QA+Y +AI+
Sbjct: 227 LGAIYQDMGDFERSSQFRIIGAHLTPKSADIWKELASESRQHGLLSQAIYCYSEAIKGTK 286
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
D+ + E+G +A Y I K+ P N D + A L + I +
Sbjct: 287 NDVESMWDRSYLLFEVGRSRQALAGYLAILKISPHNPDVLREVAHLCATTDEKELPIRLF 346
Query: 194 EEYLKVHPS 202
++ LK + S
Sbjct: 347 QDALKHYQS 355
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 245 KLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHF 304
+L+ GIC L +G+ ++A + F ++ ++A+L + D + AL +YH
Sbjct: 476 ELRTYLGICRLYIGDEDEAALHFDMIKSLGIEENAELCMSIGDAYCECAQWDEALDFYHE 535
Query: 305 LETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKE 364
L N T+N L+ K+ CY L A+ F + ++ A+ LA L +
Sbjct: 536 LAENDSTNNAKLWHKIGRCYRHLGNLEGALECFEAVAETDSLDLLAKTQLAELYEQLGFR 595
Query: 365 EEAITLLS 372
++A+ +++
Sbjct: 596 QKALDMVN 603
>gi|258565883|ref|XP_002583686.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907387|gb|EEP81788.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1034
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 189/462 (40%), Gaps = 70/462 (15%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
RG ++G + L P ++ A+ + ++++AI L+K+ ++++P + ++ L
Sbjct: 95 RGVKRGPRKPLEPSAEFKELHSAATSAFIDSDYDRAIILVKQAIQINPEMFAAHSLLSEI 154
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALW-KQLLTFAVQKGDTAQA-----MYYIRQAIRA 131
A G A AH PKD +W K + GD A +Y + I
Sbjct: 155 FLAQGQKDKAMAALFSGAHTRPKDQTVWLKVAKMISDHAGDDKSAALQDVVYCYSRVIDI 214
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+PK +R A+ Y E+G KA YE++ + P N A + A+L++ ++
Sbjct: 215 DPKRYDIRFDRAAIYRELGHSGKAVLEYERLLRELPHNTIALRQLAELYIDLNDVEKAKA 274
Query: 192 ILEEYLKVHPS--------DADLSVIDLLVAILMENNAYEKTLQ--------------HI 229
+E + + S D D S +++ V +L N + + ++ I
Sbjct: 275 RYDEAIAYYSSLDTLEEAVDFDWSDVNIYVELLGYQNKHWEGVRALRALSRWLLGRKNDI 334
Query: 230 EHAQI---------------------------VRFSGKELPLKLKVKAGICYLRLGNMEK 262
E ++ V G LP+ L+VK GI L++G K
Sbjct: 335 EWDEVWDDDREWDAEDFPRRIAAPWFSQSKYPVESYGIGLPIDLRVKLGIYRLKMGVEFK 394
Query: 263 AEILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDN 313
E + + W + D+ DL E AD L AL +Y L+ +
Sbjct: 395 DEAM-SHFMWLSPEETAPGARLYDYGDLFREAADALKEARLYLEALLFYAPLQYTQEYAD 453
Query: 314 GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSP 373
L++ +A+CYL+ + + A ++ + NI+AR+TLA ++A+ ++
Sbjct: 454 TNLFMAMADCYLACQNDSDAEGCLLTVVEYDKTNIEARVTLAKFYERLGMMDQALKYVTE 513
Query: 374 PKDL---DSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPED 412
+L +S+ M ++N E+++ + I + G P D
Sbjct: 514 AVELGRQESIPMRKRRANFGARIEQLVKEFRSIESSDGAPRD 555
>gi|307214393|gb|EFN89464.1| General transcription factor 3C polypeptide 3 [Harpegnathos
saltator]
Length = 926
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 212/505 (41%), Gaps = 76/505 (15%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
N ++ R++ + LSP + +++GEA++++A G A + E++R P+ E Y L +
Sbjct: 160 NSQQVRQRKKRRILSPILQRLMGEANVRFAKGEVGIAEQICLEIIRQVPSASEPYQLLAM 219
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
H K + F +IAA+LSP+D+ W +L +++ D QA+ +AI+A PK+I
Sbjct: 220 IHEN-DQPKKSLQFALIAAYLSPRDADQWVRLANLSLENEDIKQAIACYSKAIQASPKNI 278
Query: 137 SLR-----------------------IH----------------LASFYVEIGDYEKAAE 157
+L IH LA Y++ DYE A E
Sbjct: 279 NLYDTRAQLQLNNDDKKGYLRGYTKLIHHLDAEDGQYIIKYAKILARDYMQENDYEHALE 338
Query: 158 SYEQIQKLFPDNVDATKTGA--------QLFLKCGQT-ARSIGILEEYLKVHPSDADL-S 207
+ E + P V+ + + F KC + GI +Y K + + S
Sbjct: 339 AMEVLFAKCPHLVELGEVNVMTEALIALKQFKKCLNVLIKYAGIRVQYKKNKKTKGEAES 398
Query: 208 VIDLLVAILMENNAYE----KTLQHIEHAQIVRFSGKELP----LKLKVKAGICYLRLGN 259
D + E + + +TL +++ ++P + L+ KA I + L +
Sbjct: 399 AHDDVRKFGKEEESDDLKDRQTLHQLDYRDTDEIESCDMPDDMAVDLRAKALITLIELNH 458
Query: 260 MEKAEILFADLQWK-NAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYL 318
+ A+ L + + + DL +VA+ LM AL L + ++L
Sbjct: 459 IRIADEHLPKLYMRADPEEFGDLFLDVAEALMGKDEFQRALLLLDPLVKSEQFSLAAVWL 518
Query: 319 KLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD 378
+ AEC+ + K+ A+ + ++ ARL LA L +E+ EAI +L + +
Sbjct: 519 RHAECWTACKDFDKAVTSYEAVWKLSPQHLGARLALAKLYMEKELYNEAIRVLYQDPECE 578
Query: 379 SLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKR 438
+LD N+ + + +YR + E F + L+ CV ++R KV++
Sbjct: 579 TLDANA-----------VYQRTLLLYRVEKYDEYFSSGM--LLLSRHCV-SIRSKVELTS 624
Query: 439 RLTKGILQQRTKIYNNLPTDSILCG 463
++QR +NL + CG
Sbjct: 625 LARPTGVRQRL---DNLRLHRLSCG 646
>gi|317025320|ref|XP_001388834.2| RNA polymerase III transcription factor TFIIIC subunit (Tfc4)
[Aspergillus niger CBS 513.88]
Length = 1077
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 172/415 (41%), Gaps = 68/415 (16%)
Query: 20 RGRRKGSKNKL--SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G R+G + L SP + EA+ + G++++AI L K ++++P + ++ L
Sbjct: 133 KGIRRGPRKPLEPSPEFKILHSEATSAFIDGDYDRAIDLTKRAIQVNPEMFAAHSLLSEI 192
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK------GDTAQAMYYIRQAIRA 131
A G A AH PKD +W ++ +++ G +Y + I
Sbjct: 193 FLAQGEKDKALTALFSGAHTRPKDPTVWAKVARMILERAGEERQGALNDVIYCYSRIIEL 252
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+PK+ + R A+ Y E+G +AA YE+I K P N A + A+ ++ +++
Sbjct: 253 DPKNYNARFQRAAIYRELGYNGRAATEYERILKEVPHNARALRHLAETYIDLNDVQKAVD 312
Query: 192 ----ILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQHI------------ 229
++ + + P DA D+++ L + L K L+ +
Sbjct: 313 QWRVSVKYFTSLEPEDAPEFSWSDVNIYAELYSYLGRPFEGLKALKSVSRWLLGRKDDTM 372
Query: 230 --------------EHAQIVRFSGKE------------LPLKLKVKAGICYLRLGNMEKA 263
+ + ++ G E LPL+L++K + LR+G K
Sbjct: 373 WEDFHEDDREWDADDSPRRIKADGYEPRRWPRDSYGLGLPLELRIKLALFRLRMGYEHKN 432
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFL-ETNAGTDN 313
E L L+W N D+ DL E AD L +G AL++Y L +TN D
Sbjct: 433 EALH-HLEWLNPEDTSEHARLYDYGDLFREAADALKDVGLFEEALRFYMPLQQTNEYADV 491
Query: 314 GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
G+ ++ + EC L + A F + ++++R+ LA L EEA+
Sbjct: 492 GF-FMAMGECCSVLGKLEDAENCFLTVAEHDARHVESRVQLAKLYEGIGMSEEAL 545
>gi|115388529|ref|XP_001211770.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195854|gb|EAU37554.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1057
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 68/432 (15%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KRG RK + SP + EA+ + G++++AI L+K ++++P + ++ L
Sbjct: 141 KRGPRKPVEP--SPEFKLLHSEATSAFIDGDYDRAIDLVKRAIQINPEMFAAHSLLSEIF 198
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDT-----AQAMYYIRQAIRAE 132
A G A AH P+D +W ++ + + GD +Y + + +
Sbjct: 199 LAQGEKGKALTALFSGAHTRPRDPTVWAKVARMILARAGDDRIDALQDVIYCYSRVLEID 258
Query: 133 PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG- 191
P++ ++R A+ Y E+ +AA YE+I P + A + A+ ++ + +++
Sbjct: 259 PRNYNVRFQRAALYRELRYNGRAAAEYERILNDVPHSTRALRHLAEAYIDLEKVDKAVTR 318
Query: 192 ---ILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQHIEH----------- 231
+E Y+ + P +A D+++ L A+L ++ K L+ +
Sbjct: 319 WAESVEYYISLDPEEAPDFSWSDVNIYAELYALLGQHEKGLKALKQLARWLLGRRDDTMW 378
Query: 232 --------------------------AQIVRFS-GKELPLKLKVKAGICYLRLGNMEKAE 264
Q R S G LPL+L++K G+ LR+G K E
Sbjct: 379 ETFDEDDREWDADDSPRRIKVDGYIPGQWPRDSYGLGLPLELRIKLGLFRLRMGPEHKDE 438
Query: 265 ILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFL-ETNAGTDNG 314
LF +W N D+ DL EVAD L +G + AL++Y L +TN D
Sbjct: 439 ALFH-FEWLNPEDTAEGARLYDYGDLFREVADALKDMGLAEEALRFYMPLQQTNEYADVS 497
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPP 374
+ ++ + +C L + A + + +I +R+ LA L EEA+ ++
Sbjct: 498 F-FMAMGDCLRQLDKLEDAENCYLTVAEHDSRHIQSRVQLARLYDSLGMAEEALKYVNEA 556
Query: 375 KDLDSLDMNSDK 386
L+ ++ D+
Sbjct: 557 VLLERQEIRGDR 568
>gi|294878595|ref|XP_002768415.1| hypothetical protein Pmar_PMAR009053 [Perkinsus marinus ATCC 50983]
gi|239870843|gb|EER01133.1| hypothetical protein Pmar_PMAR009053 [Perkinsus marinus ATCC 50983]
Length = 1125
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 25/222 (11%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
G K+SP V +MLG+A+ + +++ AI LKE +RL P +P+ + TLGL + +G+
Sbjct: 157 GPSKKVSPEVREMLGKANNAFLKRDYDAAIDDLKEAIRLGPGVPDPFLTLGLIYEEMGDA 216
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDI-----SL 138
K A + ++AAHL+P D+ LWK+L + + G+ QA Y + R+ P+D S+
Sbjct: 217 KKALEVLLVAAHLTPGDTQLWKRLAERSRDELGNYTQAAYCFHRCWRSMPEDGTDEAKSV 276
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFP-DNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+A +++I Y +AA + + ++ P D V L+L+ + A + +LE L
Sbjct: 277 LWDMADCFMKIKRYARAARYLQMLFEMHPGDLVIGRMLSKALYLQADKPA-TARVLEVCL 335
Query: 198 KV-----------HPS----DADLSVIDLLVAILMENNAYEK 224
V HPS DADL +++L + ++ Y K
Sbjct: 336 GVDSDSSSSTSADHPSPSPRDADL--MNMLCEVYIDLREYGK 375
>gi|255941076|ref|XP_002561307.1| Pc16g09970 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585930|emb|CAP93667.1| Pc16g09970 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1086
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 172/417 (41%), Gaps = 68/417 (16%)
Query: 20 RGRRKGSKNKL--SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L SP + A+ + G++E+AI L+ + ++++P + ++ L
Sbjct: 140 KGIKRGPRKPLEPSPEFKHLHSGATSAFIDGDYERAIDLVMQAIQINPEMFAAHSLLSEI 199
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQA-----MYYIRQAIRA 131
A G A AH PKD +W ++ + + G+ Q+ Y + +
Sbjct: 200 FLAQGEKDKALAALFNGAHTRPKDPGVWVKVARLILDRAGENRQSALHDVAYCYSRILEV 259
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI- 190
P + ++R A+ Y E+G +AA YE++ K P + A + A+ ++ +++
Sbjct: 260 SPDNTNIRFQRAAIYRELGHNGRAAAEYERLLKDCPHSARALRHIAETYIDLNDVQKAVD 319
Query: 191 ---GILEEYLKVHPSDADLSVIDLLVAILM-------------------------ENNAY 222
++ YL + P +D + DL + + + E++ +
Sbjct: 320 HYANSIDHYLSLDPEASDFTWSDLNIYVELFGYLNEPEEGLISLKILARWLLGRGEDSVW 379
Query: 223 E------------------KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAE 264
+ KT I + G LPL+L++K G+ L+LG+ E
Sbjct: 380 DGHEDDDREWDADDSPRRIKTDGFIPNQWPRESYGLGLPLELRIKMGVFRLKLGDKHHNE 439
Query: 265 ILFA----DLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGT 311
L +W N D+ DL EVAD L +G AL+YY ++ A
Sbjct: 440 ALVKCTQHHFEWLNPEDDSEGARIFDYGDLFREVADALKQVGLFEEALRYYTPIQQTAEH 499
Query: 312 DNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
+ ++ +A+C + L + A + + ++++R+ LA L E+A+
Sbjct: 500 ADISFFMAMADCCMQLGKMEDAESCYLLVAEHDASHMESRVLLAKLYESLGMSEQAM 556
>gi|320582931|gb|EFW97148.1| One of six subunits of the RNA polymerase III transcription
initiation factor complex (TFIIIC) [Ogataea
parapolymorpha DL-1]
Length = 977
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 167/377 (44%), Gaps = 50/377 (13%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP V ++L EA+ + + + A +L EVV+L N Y TLG + GN+ +F
Sbjct: 108 SPEVKQLLSEANEAFVRNDLQTAQNLYLEVVKLDKNNFSAYKTLGEIYRLQGNYNKCSNF 167
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA-EPKDISLRIHLASFYVEI 149
+++AAHL D W+ L + + T QA+Y +AI A KD A Y E
Sbjct: 168 WLLAAHLHSWDFEFWRTLAELSAELEHTRQAVYCYSKAISASNGKDYDSIFARACLYRER 227
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG----ILEEYLKVHPSDA- 204
G +++A++S +++ + P + A+++++ + +I I EE +K +
Sbjct: 228 GQFKRASDSLHKLRAIMPQEPKIYRELAKIYVEENRVNDAISMYTRIFEENVKFRRGEKT 287
Query: 205 -------DLSVIDLLVAILMENNAYE---KTLQH----IEHAQI-----------VRFSG 239
D S +++L+ + + A+ KTL+ I+H + V F
Sbjct: 288 ELKTIAFDWSELNILLELYGKKAAWNVAIKTLKQASRWIQHRESQTFWDDLPSVDVEFDD 347
Query: 240 KE-------------------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD 280
+ LP+ ++V+ G+ L N ++A F + +N + AD
Sbjct: 348 RRFDNQKFQALKAEEKDKEYSLPIDIRVQLGLFRLNSKNTDEALRHFEYVLRENIQETAD 407
Query: 281 LITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
L + L + G + AL+Y++ + + L L +A+C ++ +A + +
Sbjct: 408 LFLRIGSELETFGLYHEALRYFYPVSGVYENNPAELVLSIAKCLRETEDFENAKEAYTRL 467
Query: 341 LDRFEDNIDARLTLASL 357
L+ DN++ ++ LA +
Sbjct: 468 LEHDPDNVEIKVALAEV 484
>gi|303322899|ref|XP_003071441.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240111143|gb|EER29296.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1036
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 179/437 (40%), Gaps = 69/437 (15%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P ++ A+ + ++++AI L+K+ ++++P + ++ L
Sbjct: 96 KGVKRGPRKPLEPSAEFKELHSAATSAFIDSDYDRAIVLVKQAIQINPEMFAAHSLLSEI 155
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV-QKGDTAQA-----MYYIRQAIRA 131
A G A AH PKD +W ++ + GD A +Y + I
Sbjct: 156 FLAQGQKDKALAALFSGAHTRPKDPTVWLKVAKMILDHAGDDRTAALQDVIYCYSRVIDV 215
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ + +R A+ Y E+G KAA+ YE++ K P N A + A+ ++ + ++++
Sbjct: 216 DAANYDVRFERAAMYRELGHKGKAAQEYERLLKDLPHNTRALRHLAETYIDINEVSKAMS 275
Query: 192 ILEE----YLKVHP---SDADLSVIDLLVAILMENNAYEKTLQ--------------HIE 230
+E Y + P +D D S +++ V + Y + L+ +E
Sbjct: 276 RYDESIAYYSSLSPQEATDFDWSDVNIYVELFGYQRNYWEGLRALRSLSRWLLGRKDDVE 335
Query: 231 HAQI---------------------------VRFSGKELPLKLKVKAGICYLRLGNMEKA 263
I V G LPL+L++K GI L++G K
Sbjct: 336 WDSIWEDDREWDAEDYPRRISTPWFSPSRYPVESYGVGLPLELRIKLGIYRLKMGPEFKD 395
Query: 264 EILFADLQW---------KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E + + W D+ DL E AD L AL +Y L+ +
Sbjct: 396 EAM-SHFVWLAPEETAPGSRLYDYGDLFRETADALKEAKFYPEALLFYTPLQYTQEFADT 454
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPP 374
L++ +A+C+L+ K + A ++ + NIDAR+ LA E+A+ ++
Sbjct: 455 SLFMAMADCHLACKNDSDAESCLLTVVEYDQTNIDARVKLAKFYESMGMMEQALKYVTEA 514
Query: 375 KDL---DSLDMNSDKSN 388
+L +S+ M + N
Sbjct: 515 VELGRQESVPMRRRRGN 531
>gi|119189697|ref|XP_001245455.1| hypothetical protein CIMG_04896 [Coccidioides immitis RS]
gi|392868345|gb|EAS34122.2| hypothetical protein CIMG_04896 [Coccidioides immitis RS]
Length = 1036
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 178/437 (40%), Gaps = 69/437 (15%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P ++ A+ + ++++AI L+K+ ++++P + ++ L
Sbjct: 96 KGVKRGPRKPLEPSAEFKELHSAATSAFIDSDYDRAIVLVKQAIQINPEMFAAHSLLSEI 155
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV-QKGDTAQA-----MYYIRQAIRA 131
A G A AH PKD +W ++ + GD A +Y + I
Sbjct: 156 FLAQGQKDKALAALFSGAHTRPKDPTVWLKVAKMILDHAGDDRTAALQDVIYCYSRVIDV 215
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ + +R A+ Y E+G KAA+ YE++ K P N A + A+ ++ + ++++
Sbjct: 216 DAANYDVRFERAAMYRELGHKGKAAQEYERLLKDLPHNTRALRHLAETYIDINEVSKAMS 275
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTLQ--------------HIE 230
+E + + S D D S +++ V + Y + L+ +E
Sbjct: 276 RYDESITYYSSLSPQEATDFDWSDVNIYVELFGYQRNYWEGLRALRSLSRWLLGRKDDVE 335
Query: 231 HAQI---------------------------VRFSGKELPLKLKVKAGICYLRLGNMEKA 263
I V G LPL+L++K GI L++G K
Sbjct: 336 WDSIWEDDREWDAEDYPRRISTPWFSPSRYPVESYGVGLPLELRIKLGIYRLKMGPEFKD 395
Query: 264 EILFADLQW---------KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E + + W D+ DL E AD L AL +Y L+ +
Sbjct: 396 EAM-SHFVWLAPEETAPGSRLYDYGDLFRETADALKEAKFYPEALLFYTPLQYTQEFADT 454
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPP 374
L++ +A+C+L+ K + A ++ + NIDAR+ LA E+A+ ++
Sbjct: 455 SLFMAMADCHLACKNDSDAESCLLTVVEYDQTNIDARVKLAKFYESMGMMEQALKYVTEA 514
Query: 375 KDL---DSLDMNSDKSN 388
+L +S+ M + N
Sbjct: 515 VELGRQESVPMRRRRGN 531
>gi|170039582|ref|XP_001847609.1| general transcription factor 3C polypeptide 3 [Culex
quinquefasciatus]
gi|167863127|gb|EDS26510.1| general transcription factor 3C polypeptide 3 [Culex
quinquefasciatus]
Length = 888
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 198/457 (43%), Gaps = 57/457 (12%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
K + KR RR L P + ++G+A+L YA G+ E A L E+VR P E + TL
Sbjct: 155 KASMKRHRRM-----LPPALQGLMGQANLCYARGDAEMAKQLCLEIVRQVPLAHEPFITL 209
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
+ K F +IAAHL+P D W ++ + ++G+ QA+ +AI+ +PK
Sbjct: 210 AQIYETEDPEK-FLQFSLIAAHLNPSDVEQWVRIAEISEERGNLDQALTCYSRAIKTDPK 268
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARS 189
+ LR+ + G+ ++A + Y + P V+ K A+ F + +
Sbjct: 269 NFDLRMKRVQLLEKKGEEKQAFKCYFAMLPYIPKERGEFLVETAKRLAKKFHEESNITAA 328
Query: 190 IGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ------HIEHAQIVRFSGKELP 243
+ ++ P + I+L + +L+ Y + L +E ++V + +E P
Sbjct: 329 MEAMDRAYGTVPELFSVEDINLFLELLIATGNYRRALDVLMVHTSVEVHEMV--NEEEEP 386
Query: 244 ----------------LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHA-DLITEVA 286
L + K + + L E++ ++ ++ A D ++A
Sbjct: 387 TSRRSIYTVVIPDVIILDFRTKLAVVLIHLKCEHLFEMIVTNILTNINVEEAGDCYLDIA 446
Query: 287 DTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
++LM + ALK L + ++L+ A+C ++ + +I YK +
Sbjct: 447 ESLMKEESYHFALKLLVPLIKSENFSLAAVWLRYADCLRAIGDYNESIKA-YKKVISLAQ 505
Query: 347 NIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRA 406
++DARLTL++LL ++ EEA+ L + + +D +++ + C + +
Sbjct: 506 HLDARLTLSALLKQQGNYEEALKALEQDPETEVMDA------------ELLYERCLMLKE 553
Query: 407 KGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKG 443
G ++F+ A F L+ +R + ++ RL G
Sbjct: 554 VGKYDEFLSAGFMLL--------MRHCIPLRSRLEMG 582
>gi|425772992|gb|EKV11370.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Penicillium digitatum PHI26]
gi|425782148|gb|EKV20074.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Penicillium digitatum Pd1]
Length = 1107
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 171/413 (41%), Gaps = 65/413 (15%)
Query: 20 RGRRKGSKNKLSPGVTKMLGEASLQYAY--GNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P L + A+ G++++AI L+ + ++++P + ++ L
Sbjct: 166 KGIKRGPRKPLEPSPEFKLLHSGATSAFIDGDYDRAIDLVMQAIQINPEIFAAHSLLSEI 225
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQAM-----YYIRQAIRA 131
A G + A AH PKD +W ++ + + G+ Q+ Y + +
Sbjct: 226 FLAQGENDKALAALFNGAHTRPKDPGVWIKVARLILDRAGENRQSALHDVAYCYSRILEV 285
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
P + ++R A+ Y E+G +AA YE++ K P + A + A+ ++ ++
Sbjct: 286 SPGNTNIRFQRAAIYRELGHNGRAAAEYERLLKDSPHSPRALRHLAETYIDLNDVQKAAD 345
Query: 192 I----LEEYLKVHPSDADLSVIDL--LVAILMENNAYEKTLQHIE--------------- 230
++ YL + P D + + DL V + N E+ L ++
Sbjct: 346 YYADSMDHYLSLDPGDCEFTWSDLNIYVELFGYLNQPEEGLISLKILARWLLGRGEDSVW 405
Query: 231 -------------------------HAQIVRFS-GKELPLKLKVKAGICYLRLGNMEKAE 264
Q R S G LPL+L++K G+ L++G+ +E
Sbjct: 406 DSHEDDDREWDADDSPRRIKTDGFLPGQWPRESYGLGLPLELRIKMGVFRLKVGDKHHSE 465
Query: 265 ILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY 315
L +W N D+ DL EVAD L G AL+YY ++ A +
Sbjct: 466 ALH-HFEWLNPEDDSEGARIFDYGDLFREVADALKQAGLFEEALRYYTPIQQTAEHADIS 524
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
++ +AECY+ + + A + + ++++R+ LA L E+A+
Sbjct: 525 FFMAMAECYMQMGKMEDAESCYLLVAEHDASHMESRVLLAKLYESLGMNEQAM 577
>gi|443896219|dbj|GAC73563.1| RNA polymerase III transcription factor TFIIIC [Pseudozyma
antarctica T-34]
Length = 1250
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
K+R RRK + LS V ++ E +L Y AI L+EV+R+ P++ +NTLGL
Sbjct: 212 QKRRVRRKAHEQPLSAEVQALMAEVNLAYVENRLHDAIPKLEEVIRIEPSVMAAWNTLGL 271
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ LG + + +I AHL P+ +A WK L ++++ QA+Y +QAI+ + D+
Sbjct: 272 IYEELGEEEKSIQSRIIGAHLQPRANAEWKTLAYRSIKQTLYRQAIYCFQQAIKIDKTDV 331
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEY 196
A ++GD++ A I KL P + + + + R I +LE +
Sbjct: 332 DSIWDRALLLRDLGDHKAAISGMLDILKLQPYDASVVRELVPMLVSTRDYDRGIEVLERW 391
>gi|71028630|ref|XP_763958.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350912|gb|EAN31675.1| hypothetical protein TP04_0323 [Theileria parva]
Length = 882
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 96/173 (55%), Gaps = 3/173 (1%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH-KS 86
+KL+P + K+L EA+ Y NFE+A+ +LKE++R +P L + ++ LGL + N +
Sbjct: 75 SKLNPELEKLLQEATDLYLNKNFEEAVKILKELIRRAPGLHDPFHMLGLIYQNEYNDVTT 134
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR--IHLAS 144
A +Y++AAHL P D+ LW+++ + + G+ QA+Y ++ R + I+ + LA
Sbjct: 135 ANSYYLLAAHLVPTDTDLWQRIGEMSQETGNIDQAIYCFKKCQRDQEGQINEQAVFALAI 194
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
Y+E DY+ AA+ + + L P++ ++ F G S+ +L Y
Sbjct: 195 CYIEKKDYDNAAKRFLVLFNLHPNDKLIANELSRCFQMIGDLHSSLLVLTAYF 247
>gi|134054931|emb|CAK36942.1| unnamed protein product [Aspergillus niger]
Length = 1073
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 172/417 (41%), Gaps = 69/417 (16%)
Query: 20 RGRRKGSKNKL--SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G R+G + L SP + EA+ + G++++AI L K ++++P + ++ L
Sbjct: 126 KGIRRGPRKPLEPSPEFKILHSEATSAFIDGDYDRAIDLTKRAIQVNPEMFAAHSLLSEI 185
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK------GDTAQAMYYIRQAIRA 131
A G A AH PKD +W ++ +++ G +Y + I
Sbjct: 186 FLAQGEKDKALTALFSGAHTRPKDPTVWAKVARMILERAGEERQGALNDVIYCYSRIIEL 245
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+PK+ + R A+ Y E+G +AA YE+I K P N A + A+ ++ +++
Sbjct: 246 DPKNYNARFQRAAIYRELGYNGRAATEYERILKEVPHNARALRHLAETYIDLNDVQKAVD 305
Query: 192 ----ILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQHI------------ 229
++ + + P DA D+++ L + L K L+ +
Sbjct: 306 QWRVSVKYFTSLEPEDAPEFSWSDVNIYAELYSYLGRPFEGLKALKSVSRWLLGRKDDTM 365
Query: 230 --------------EHAQIVRFSGKE------------LPLKLKVKAGICYLRLGNMEKA 263
+ + ++ G E LPL+L++K + LR+G K
Sbjct: 366 WEDFHEDDREWDADDSPRRIKADGYEPRRWPRDSYGLGLPLELRIKLALFRLRMGYEHKN 425
Query: 264 EILFAD--LQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFL-ETNAGT 311
E L L+W N D+ DL E AD L +G AL++Y L +TN
Sbjct: 426 EALKLQHHLEWLNPEDTSEHARLYDYGDLFREAADALKDVGLFEEALRFYMPLQQTNEYA 485
Query: 312 DNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
D G+ ++ + EC L + A F + ++++R+ LA L EEA+
Sbjct: 486 DVGF-FMAMGECCSVLGKLEDAENCFLTVAEHDARHVESRVQLAKLYEGIGMSEEAL 541
>gi|358372059|dbj|GAA88664.1| RNA polymerase III transcription factor TFIIIC subunit Tfc4
[Aspergillus kawachii IFO 4308]
Length = 1076
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 173/415 (41%), Gaps = 68/415 (16%)
Query: 20 RGRRKGSKNKL--SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G R+G + L SP + EA+ + G++++AI L K ++++P + ++ L
Sbjct: 133 KGIRRGPRKPLEPSPEFKILHSEATSAFIDGDYDRAIDLTKRAIQVNPEMFAAHSLLSEI 192
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQA-----MYYIRQAIRA 131
G A AH PKD +W ++ +++ G+ Q +Y + I
Sbjct: 193 FLVQGEKDKALTALFSGAHTRPKDPTVWAKVARMILERAGEERQGALNDVIYCYSRIIEL 252
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+PK+ + R A+ Y E+G +AA YE+I K P N A + A+ ++ + +++
Sbjct: 253 DPKNYNTRFQRAAIYRELGYNGRAATEYERILKEVPHNARALRHLAETYIDLNEVQKAVD 312
Query: 192 ----ILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQHI------------ 229
++ + + P DA D ++ L + L K L+ +
Sbjct: 313 QWRVSVKYFTSLEPEDAPEFSWSDANIYAELYSYLGRPFEGLKALKSVSRWLLGRKDDTM 372
Query: 230 --------------EHAQIVRFSGKE------------LPLKLKVKAGICYLRLGNMEKA 263
+ + ++ G E LPL+L++K + LR+G K
Sbjct: 373 WEDFHEDDREWDADDSPRRIKADGYEPRRWPRDSYGLGLPLELRIKLALFRLRMGYEHKN 432
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFL-ETNAGTDN 313
E L L+W N D+ DL E AD L +G AL++Y L +TN D
Sbjct: 433 EALH-HLEWLNPEDTSENARLYDYGDLFREAADALKDVGLFEEALRFYMPLQQTNEYADV 491
Query: 314 GYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
G+ ++ + EC L + A F + ++++R+ LA L EEA+
Sbjct: 492 GF-FMAMGECCSVLGKLEDAENCFLTVAEHDARHVESRVQLAKLYEGIGMSEEAL 545
>gi|320033490|gb|EFW15438.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 1036
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 179/437 (40%), Gaps = 69/437 (15%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P ++ A+ + ++++AI L+K+ ++++P + ++ L
Sbjct: 96 KGVKRGPRKPLEPSAEFKELHSAATSAFIDSDYDRAIVLVKQAIQINPEMFAAHSLLSEI 155
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV-QKGDTAQA-----MYYIRQAIRA 131
A G A AH PKD +W ++ + GD A +Y + I
Sbjct: 156 FLAQGQKDKALAALFSGAHTRPKDPTVWLKVAKMILDHAGDDRTAALQDVIYCYSRVIDV 215
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ + +R A+ Y ++G KAA+ YE++ K P N A + A+ ++ + ++++
Sbjct: 216 DAANYDVRFERAAMYRDLGHKGKAAQEYERLLKDLPHNTRALRHLAETYIDINEVSKAMS 275
Query: 192 ILEE----YLKVHP---SDADLSVIDLLVAILMENNAYEKTLQ--------------HIE 230
+E Y + P +D D S +++ V + Y + L+ +E
Sbjct: 276 RYDESIAYYSSLSPQEATDFDWSDVNIYVELFGYQRNYWEGLRALRSLSRWLLGRKDDVE 335
Query: 231 HAQI---------------------------VRFSGKELPLKLKVKAGICYLRLGNMEKA 263
I V G LPL+L++K GI L++G K
Sbjct: 336 WDSIWEDDREWDAEDYPRRISTPWFSPSRYPVESYGVGLPLELRIKLGIYRLKMGPEFKD 395
Query: 264 EILFADLQW---------KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E + + W D+ DL E AD L AL +Y L+ +
Sbjct: 396 EAM-SHFVWLAPEETAPGSRLYDYGDLFRETADALKEAKFYPEALLFYTPLQYTQEFADT 454
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPP 374
L++ +A+C+L+ K + A ++ + NIDAR+ LA E+A+ ++
Sbjct: 455 SLFMAMADCHLACKNDSDAESCLLTVVEYDQTNIDARVKLAKFYESMGMMEQALKYVTEA 514
Query: 375 KDL---DSLDMNSDKSN 388
+L +S+ M + N
Sbjct: 515 VELGRQESVPMRRRRGN 531
>gi|332016528|gb|EGI57409.1| General transcription factor 3C polypeptide 3 [Acromyrmex
echinatior]
Length = 933
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 177/420 (42%), Gaps = 61/420 (14%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS-----PNLPETYNTLGL 76
R+K + L P + ++GEA+L++A G + A + E++R P+ PE + TL +
Sbjct: 171 RQKKKRRILPPVLQGLMGEANLRFAKGEVDLAAKICMEIIRQVVLVQVPSAPEPFQTLAM 230
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
+ KS F +IAAHLSPKD+ W +L +++ GD QA+ +AI+A PKDI
Sbjct: 231 IYENDQPEKS-LQFALIAAHLSPKDADQWVRLANLSLESGDIKQAITCYSKAIQASPKDI 289
Query: 137 SLR-----------------------IH----------------LASFYVEIGDYEKAAE 157
SL IH LA Y++ + E+A E
Sbjct: 290 SLYETRAQLQEQNGDKKAYLRGYTKLIHQLEVEDGEYIMKYAKMLAKRYMQEDNNEQALE 349
Query: 158 SYEQIQKLFPD--NVDATKTGAQLFLKCGQTARSIGILEEYLKVH-------PSDADLSV 208
+ E I PD ++ +L + Q R + IL +Y + + ++
Sbjct: 350 AVEIIFVKCPDLITLEEVNIMTELLIALKQFQRCLDILVKYTNIQIRYKNNEEKEERIAA 409
Query: 209 IDLLVAILME-NNAYEKTLQHIEHAQIV-RFSGKELP----LKLKVKAGICYLRLGNMEK 262
D E +NA K + +Q +P + LK K I + L +
Sbjct: 410 NDAKADKEEECSNAKRKAVSPTWRSQNSDEIESCNVPDNVVVDLKAKFLIILIELDYISI 469
Query: 263 AEILFADLQWK-NAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLA 321
AE L + + N DL +VA+ LMS + A+ L ++ ++L+ A
Sbjct: 470 AEKLLPNFYMRENPEISGDLFLDVAEALMSKKEFHRAMILLDPLVKSSNFSLAAVWLRHA 529
Query: 322 ECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
EC++ + AI + ++ ARL LA L + + ++AI +L + D+LD
Sbjct: 530 ECWVGCNDVDKAIESYETVRKLSPQHLGARLALAKLYKKSERYDKAIQVLYQDPESDTLD 589
>gi|323507863|emb|CBQ67734.1| related to transcription factor TFIIIC subunit [Sporisorium
reilianum SRZ2]
Length = 1304
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 87/183 (47%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
K+R RRK + LSP V +L EA+L Y AI L+EV+R+ PN+ +NTLGL
Sbjct: 223 QKRRARRKLHEQPLSPEVQALLAEANLAYVENRLYDAIPKLEEVIRIEPNVMAAWNTLGL 282
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
++ +G + + +I AHL S WK L ++ + QA+Y +QAI+ DI
Sbjct: 283 IYAEVGEEEKSIQCRIIGAHLQSGASGEWKSLAYRSIAQMLYRQAIYCFQQAIKINKTDI 342
Query: 137 SLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEY 196
A ++GDY+ A I KL + + + + R I +LE +
Sbjct: 343 DSIWDRALLLRDLGDYKAAINGMLDILKLQQFDASVVRELVPMLVTTRDYDRGIELLERW 402
Query: 197 LKV 199
K
Sbjct: 403 RKT 405
>gi|302903370|ref|XP_003048841.1| hypothetical protein NECHADRAFT_95657 [Nectria haematococca mpVI
77-13-4]
gi|256729775|gb|EEU43128.1| hypothetical protein NECHADRAFT_95657 [Nectria haematococca mpVI
77-13-4]
Length = 955
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 168/429 (39%), Gaps = 72/429 (16%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
E++ G R R RG RK +K + +T L + + + G +++A+ L+ EV+
Sbjct: 51 EVVPSGATRAGYRG-RGARGPRKAAKPR--GDITARLSKVNQAFLSGEYDRALDLVFEVI 107
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV------QK 115
R++ + + TL G+ A V AAHL PKD + W Q +FA+ +
Sbjct: 108 RINAETHQAWTTLSSIFREQGDLSKALSAMVYAAHLRPKDVSGWLQCASFALDTIGDDEA 167
Query: 116 GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKT 175
G+ A A+RA+ +I R+ G A Y+ + K P +++ +
Sbjct: 168 GNLNTARLCYSAALRADHTNIDARLGKGLVCHRQGHLAAAISDYKTVLKHRPYDLEIVRK 227
Query: 176 GAQLFLKCGQ----TARSIGILEEYLKVHPSDADLSV------IDLLVAILMENNAYEKT 225
A+ L Q +I + + SD + I + V + Y+
Sbjct: 228 LAEACLDNKQADTTVPSAIAAYKRFFDHEKSDPSAGMEAPWHDIGIYVDLFAATGRYQDA 287
Query: 226 L----------------------------------------QHIEHAQIVRFSGKELPLK 245
+ ++ A G+ P
Sbjct: 288 IYQAKSLSRWLLGRDAETFWDNWQSDDREWDGDDERRLYVPEYTAGAWSPELYGQSFPWD 347
Query: 246 LKVKAGICYLRLGNMEKAEILFADLQWKNAI---------DHADLITEVADTLMSLGHSN 296
L+ + I RLG+ ++A L W + + D + ++A+ L GH+
Sbjct: 348 LRSRLAIYRFRLGDEDEA---MRHLWWFDPVLEHTKEFASDFPFMAFDMAEELAHRGHTP 404
Query: 297 SALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLAS 356
A+ YY L G + + L+L C+ ++ E A A +F A+D ED IDAR+ LA+
Sbjct: 405 LAISYYQILRDLPGDPDATILLQLGRCHSAMGENATAEEYFLAAIDADEDQIDARIELAN 464
Query: 357 LLLEEAKEE 365
+ E+A+E+
Sbjct: 465 -MYEKARED 472
>gi|240279832|gb|EER43337.1| transcription factor tfiiic complex subunit sfc4 [Ajellomyces
capsulatus H143]
Length = 1058
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 66/403 (16%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 107 KGIKRGPRKPLEPSLEFKNLHSEATSAFIDADYERATVLVKQAIQINPEMFAAHSLLSEI 166
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD ++W ++ +++ D A+ Y + I
Sbjct: 167 FLAQGQKDKALAALFSGAHTRPKDPSVWMKVAKLILERTGEDRTSALQDVIYCYSRVIEI 226
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R AS Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 227 DQKNYDIRFERASVYRELGHNGKAAQEYERLLKDLPHNTTALRLLAETYIDLNEVDKAKS 286
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTL------------------ 226
+E + + S D S +++ V + +E+ +
Sbjct: 287 RYDESIAYYMSLTLEEATDFTWSDVNIYVEFFSYLDDHEQGIFMLKSLSRWLLGRKDNVE 346
Query: 227 -------------QHIEHAQIVRF----------SGKELPLKLKVKAGICYLRLGNMEKA 263
+H V F G LPL+L+VK GI L+LG +
Sbjct: 347 WDDIVEDDREFDAEHFPRRSEVAFFVPNKYPIESYGSGLPLELRVKLGIYRLKLGLQYRE 406
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL E D L A+ +Y L+ +
Sbjct: 407 EAL-SHFSWLNPDDSSEGALLYDFGDLFREAGDALKDAQLYQDAIFFYLPLQRTREYADT 465
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
L++ +AECY++ + A + ++ +NI+AR LA
Sbjct: 466 SLFMSMAECYVACENDEAAENCYLTVVEYDRNNIEARAKLAKF 508
>gi|118388558|ref|XP_001027376.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89309146|gb|EAS07134.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 662
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 174/362 (48%), Gaps = 22/362 (6%)
Query: 20 RGRRKGSKNKLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAH 78
+G+R+ K+ +++++ +A+ +Y + N ++AI + KE++R P+ ++Y+ LG
Sbjct: 40 KGQRQ---QKIPQQISQLISDANSKYVFQNQIDEAIEIAKEIIRQYPSFTDSYDLLGNIF 96
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
G K A ++ +AA+ S ++ W+ + + A Y + ++++ + SL
Sbjct: 97 EEQGMMKEAAEYQFLAAYQSNANAKKWEGIAQLYKKAKCYDSAGYCFGRVLKSDTLNTSL 156
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
A Y + G+ +KA + +E++ K+ N DA K A+L+LK ++ SI +L+ +K
Sbjct: 157 WCERAKCYEQTGELKKAIKCFERVIKMDEKNFDAIKNCAKLYLKLDKSDESIKLLKTMIK 216
Query: 199 VHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLG 258
+ + + ++I ++ E +++ + ELPL + + + + +L
Sbjct: 217 PNDMNKNYNIIHMIQLCEFLEEYCEMKDKNVRETIL-----DELPLAILIFYAVSHAKLQ 271
Query: 259 NMEKAEILFADLQWKNAIDHADLIT---EVADTLMSLGHSNSALKYYH------FLETNA 309
N E+ E+ F + + ++ D ++ E+A+ S AL+ Y FL+ N
Sbjct: 272 NKEECELGFNLILRREMEENDDFVSIMEELAEMYESSKEEEKALQIYKRLISLPFLQMNY 331
Query: 310 GTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
++ K L L E +I + + +F D+ID R L+S+ + ++++
Sbjct: 332 QQ----VWEKYGTLLLKLHENEESIKEIEEIIQKFPDSIDLRTELSSVYQSLGRNQDSLK 387
Query: 370 LL 371
+L
Sbjct: 388 IL 389
>gi|225563013|gb|EEH11292.1| transcription factor tfiiic complex subunit sfc4 [Ajellomyces
capsulatus G186AR]
Length = 1058
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 66/403 (16%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 107 KGIKRGPRKPLEPSLEFKNLHSEATSAFIDADYERATVLVKQAIQINPEMFAAHSLLSEI 166
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD ++W ++ +++ D A+ Y + I
Sbjct: 167 FLAQGQMDKALAALFSGAHTRPKDPSVWMKVAKLILERTGEDRTSALQDVIYCYSRVIEI 226
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R AS Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 227 DQKNYDIRFERASVYRELGHNGKAAQEYERLLKDLPHNTTALRLLAETYIDLNEVDKAKS 286
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTL------------------ 226
+E + + S D S +++ V + +E+ +
Sbjct: 287 RYDESIAYYMSLTLEEATDFTWSDVNIYVEFFSYLDDHEQGIFMLKSLSRWLLGRKDNVE 346
Query: 227 -------------QHIEHAQIVRF----------SGKELPLKLKVKAGICYLRLGNMEKA 263
+H V F G LPL+L+VK GI L+LG +
Sbjct: 347 WDDIVEDDREFDAEHFPRRSEVAFFVPNKYPIESYGSGLPLELRVKLGIYRLKLGLQYRE 406
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL E D L A+ +Y L+ +
Sbjct: 407 EAL-SHFSWLNPDDSSEGALLYDFGDLFREAGDALKDAQLYQDAILFYLPLQRTREYADT 465
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
L++ +AECY++ + A + ++ +NI+AR LA
Sbjct: 466 SLFMSMAECYVACENDEAAENCYLTVVEYDRNNIEARAKLAKF 508
>gi|449672370|ref|XP_002159119.2| PREDICTED: general transcription factor 3C polypeptide 3-like
[Hydra magnipapillata]
Length = 956
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 169/427 (39%), Gaps = 80/427 (18%)
Query: 20 RGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS 79
R R + KLS LG+A++ A G+F+QA + +VV+ P+ E + TL +
Sbjct: 194 RKRTYAVRQKLSEMARLQLGQANMLVAKGDFKQAAEICMDVVKEVPSSGEPFKTLSFIYD 253
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
GN + A + +++A L KD+ W+ L + +G QA+ +A + D L+
Sbjct: 254 EQGNKEMALQYALVSAFLDCKDAQEWRDLAQRCINEGSETQALACYDRACKVLSTDACLQ 313
Query: 140 IHLASFYVEIGDYEKAAESYEQIQKL-----FPDNVDATKTGAQLFLKCGQTARSIGILE 194
A+ Y E DY K + I K+ D + K ++L+ K G T RS +LE
Sbjct: 314 WDRATMYFEKQDYRKTLDILFTIMKIIKPTHLEDFMVIAKEISKLYHKFGLTDRSREMLE 373
Query: 195 EYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKL--KVKAGI 252
K+ + D I LL + M Y+K L+ IV+ +LP + K G+
Sbjct: 374 VACKMCINVKDYESIHLLCEMYMAIKEYDKLLK-----LIVKTCDVKLPEDVFKKKDCGV 428
Query: 253 CYLRLGNMEKAEILFADL-----------------QWKNAIDHA---------------D 280
+ + + + F DL Q N ID D
Sbjct: 429 NFSEIA-AQVSSSQFTDLSSHIVAKLTESSSQIIDQPSNTIDICSKSVESFYVPVELPLD 487
Query: 281 LITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECY-------LSLK----- 328
+ ++A L+ L N L + D G L L LAE Y L+LK
Sbjct: 488 IRVKLAQGLVYLNELNYVESITEPLFSEDLNDVGDLMLDLAESYYETGNYQLALKYLLEL 547
Query: 329 -----------------------ERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEE 365
E+ +I +Y L ++ R+TLASLL + +
Sbjct: 548 VECVKFNQAAVWLKIAESFDYLNEKEKSIDAYYMVLSLVPQHVSVRMTLASLLRSVGRAD 607
Query: 366 EAITLLS 372
EA+T++S
Sbjct: 608 EAVTVIS 614
>gi|449017742|dbj|BAM81144.1| similar to RNA polymerase III transcription factor TFIIIC
[Cyanidioschyzon merolae strain 10D]
Length = 672
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+L+P + +L A L Y A+ EV+ P Y TL L HSA G A
Sbjct: 118 RLAPELEPLLARAHLCYLENQLHDAVVACHEVIVKDPKAVPAYKTLSLIHSARGEWSKAL 177
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA----EPKDISLRIHLAS 144
D +IAAHL+P D WK + + +V+ G QA++ + +A+ A + + + R +L
Sbjct: 178 DLALIAAHLNPHDVDWWKYIASESVRMGKPRQAIHCLTKALSATRGHDEEALRERTYL-- 235
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+++IGD ++AA +EQ+ ++ P + DA A+L+L+ G+ A + +L ++L
Sbjct: 236 -FLQIGDEKRAAAGFEQLLRMEPADEDAVVNLARLYLERGEAATAETLLTKWL 287
>gi|154280386|ref|XP_001541006.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412949|gb|EDN08336.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1046
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 165/411 (40%), Gaps = 66/411 (16%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 107 KGIKRGPRKPLEPSLEFKNLHSEATSAFIDADYERATVLVKQAIQINPEMFAAHSLLSEI 166
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD ++W ++ +++ D A+ Y + I
Sbjct: 167 FLAQGQKDKALAALFSGAHTRPKDPSVWMKVAKLILERTGEDRTSALQDVIYCYSRVIEI 226
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R AS Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 227 DQKNYDIRFERASVYRELGHNGKAAQEYERLLKDLPHNTTALRLLAETYIDLNEVDKAKS 286
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTL------------------ 226
+E + + S D S +++ V + +E+ +
Sbjct: 287 RYDESIAYYMSLTLEEATDFTWSDVNIYVEFFSYLDDHEQGIFMLKSLSRWLLGRKDNVE 346
Query: 227 -------------QHIEHAQIVRF----------SGKELPLKLKVKAGICYLRLGNMEKA 263
+H V F G LPL+L+VK GI L+LG +
Sbjct: 347 WDDIVEDDREFDAEHFPRRSEVAFFVPNKYPIESYGSGLPLELRVKLGIYRLKLGLQYRE 406
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL E D L A+ +Y L+ +
Sbjct: 407 EAL-SHFSWLNPDDSSEGALLYDFGDLFREAGDALKDAQLHQDAILFYLPLQRTHEYADT 465
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEE 365
L++ +AECY++ + A + ++ +NI AR LA + ++E
Sbjct: 466 SLFMSMAECYVACENDEAAENCYLTVVEYDRNNIVARAKLAKFYEKLGRQE 516
>gi|325092961|gb|EGC46271.1| transcription factor tfiiic complex subunit sfc4 [Ajellomyces
capsulatus H88]
Length = 1066
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 66/403 (16%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 138 KGIKRGPRKPLEPSLEFKNLHSEATSAFIDADYERATVLVKQAIQINPEMFAAHSLLSEI 197
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD ++W ++ +++ D A+ Y + I
Sbjct: 198 FLAQGQKDKALAALFSGAHTRPKDPSVWMKVAKLILERTGEDRTSALQDVIYCYSRMIEI 257
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R AS Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 258 DQKNYDIRFERASVYRELGHNGKAAQEYERLLKDLPHNTTALRLLAETYIDLNEVDKAKS 317
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTL------------------ 226
+E + + S D S +++ V + +E+ +
Sbjct: 318 RYDESIAYYMSLTLEEATDFTWSDVNIYVEFFSYLDDHEQGIFMLKSLSRWLLGRKDNVE 377
Query: 227 -------------QHIEHAQIVRF----------SGKELPLKLKVKAGICYLRLGNMEKA 263
+H V F G LPL+L+VK GI L+LG +
Sbjct: 378 WDDIVEDDREFDAEHFPRRSEVAFFVPNKYPIESYGSGLPLELRVKLGIYRLKLGLQYRE 437
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL E D L A+ +Y L+ +
Sbjct: 438 EAL-SHFSWLNPDDSSEGALLYDFGDLFREAGDALKDAQLYQDAIFFYLPLQRTREYADT 496
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
L++ +AECY++ + A + ++ +NI+AR LA
Sbjct: 497 SLFMSMAECYVACENDEAAENCYLTVVEYDRNNIEARAKLAKF 539
>gi|358060352|dbj|GAA93757.1| hypothetical protein E5Q_00403 [Mixia osmundae IAM 14324]
Length = 1139
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 180/452 (39%), Gaps = 88/452 (19%)
Query: 9 YRKKTRKLNKKRGRR-------KGSKNKLSPG--VTKMLGEASLQYAYGNFEQAISLLKE 59
+R++ R+ + K GRR +G+K ++ P V ++LG+A+ + ++ AI L
Sbjct: 185 FRQELRRTSMK-GRRSRVKSRIRGAKRQVEPTAEVARLLGDANESFVGQDYPAAILKLTR 243
Query: 60 VVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTA 119
++RL PNL ++TL + LGN + A F ++ AHL + +W +L +
Sbjct: 244 IIRLQPNLATAWHTLSAINKDLGNVEKALMFDLVGAHLLDGEVDIWFELAQQSRDLNQNV 303
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
QA+Y Q + A+ D+ A +IGD A ++ ++ K +P ++ + L
Sbjct: 304 QAIYCYSQVLAADKNDVDALWAKAELSEQIGDTRTAVATFRRLAKAYPFDLPTVRKLTGL 363
Query: 180 FLKCGQTARSIGILEEYLKVHPSDA------------DLSVIDLLVAILMENNAYEKTLQ 227
F + ++ ++ + + H +DL+ L Y +
Sbjct: 364 FYRDNYFTQAADMMVQAFEHHRQQTLEPLRQEDTARFTADDLDLMAQALQAAQRYRDACR 423
Query: 228 HIEHAQIVRFSGK--------------------------------------ELPL----- 244
+I Q R+ G+ EL L
Sbjct: 424 YIREGQ--RWLGERAHQTFWAAFEDDREFDIDRTMTARPIKGETTVTQQILELALSCPVY 481
Query: 245 ----KLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALK 300
+L+++ IC + N ++++ + + DH + E+AD+L++ SA
Sbjct: 482 SLPARLRLRLAICRVLSHNSTESKLHLLAIDKISVADHWAVCGELADSLLATQQFQSAKV 541
Query: 301 YY---HFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
Y ++ N+ T LY LA CY L+ AI LD +++ + L +L
Sbjct: 542 IYEQMRLIDDNSPT----LYRNLARCYTGLELYPKAIDIISALLDNDPNDLALKEELGNL 597
Query: 358 LLEEAKEEEAITLL----------SPPKDLDS 379
+++ + A+ LL PP D D+
Sbjct: 598 WVKQGNVQRAVQLLEEVAVVRRASQPPPDSDN 629
>gi|295672766|ref|XP_002796929.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282301|gb|EEH37867.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1189
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 168/413 (40%), Gaps = 71/413 (17%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + + P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 240 KGIKRGPRKPIEPSLEFKNLHSEATSAFIDTDYERATVLVKQAIQINPEMFAAHSLLSEI 299
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD A+W ++ +++ D + A+ Y + +
Sbjct: 300 FLAQGQKDKALAALFSGAHTRPKDPAVWMKVAKLILERAGEDRSSALQDVVYCYSRIVEI 359
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R A+ Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 360 DQKNYDIRFKRAAVYRELGHNGKAAQEYERLLKDLPHNTTALRHLAETYIDLNEVHKAKS 419
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTLQHI--------------E 230
+E + + S D S +++ N YE+ + + E
Sbjct: 420 RYDESISYYTSLSLEEATDFTWSDVNIYAEFFSYLNDYEQGIFQLRSLSRWLLGRKDDTE 479
Query: 231 HAQIVRFS---------------------------GKELPLKLKVKAGICYLRLGNMEKA 263
IV G LPL+L+V+ GI L+LG +
Sbjct: 480 WDDIVEDDREWDAEDFPRRVDMPFFDPNKYPTESYGIGLPLELRVRLGIYRLKLGLQYRE 539
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL E D L AL YY L+++ +
Sbjct: 540 EAL-SHFSWLNPDDASEGALLYDFGDLFREAGDALKDAKLYQDALTYYQPLQSSREYADT 598
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL-----LLEEA 362
L++ +AEC + + A + ++ E+NI+AR LA L+E+A
Sbjct: 599 SLFMSMAECNTACENDEAAENCYLTVVEYDENNIEARAKLAKFYEKLGLIEQA 651
>gi|340500735|gb|EGR27595.1| hypothetical protein IMG5_193950 [Ichthyophthirius multifiliis]
Length = 343
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 115/222 (51%), Gaps = 5/222 (2%)
Query: 29 KLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K+ P +T+++G+A+ +Y + + +AI + K+++R P+ + Y LG K A
Sbjct: 36 KIPPQITQLIGDANYKYYFQDKATEAIQIAKDIIRQYPSFSDPYELLGNIFEDYKMIKEA 95
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
++ +AA+ S + W+Q+ + A Y +A+++E ++ L Y
Sbjct: 96 AEYQFLAAYQSNSSAKKWEQIGYLYKEAKCFDSAGYCFGRALKSEGQNSQLWFERGKCYQ 155
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+IG+ +KA YE++ + +N++A K A+L+LK SI IL++Y K + + D +
Sbjct: 156 QIGELKKAIHCYEKVMFMNENNIEAVKNCAKLYLKLDNHEESIKILKKYTKNNTENKDFN 215
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVK 249
+I ++ I N +K + +I + +I R + + L ++K
Sbjct: 216 LIHMICQIY---NMVKKNI-YINYIKINRNNNLRIQLIFQMK 253
>gi|321477323|gb|EFX88282.1| hypothetical protein DAPPUDRAFT_311610 [Daphnia pulex]
Length = 886
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 167/383 (43%), Gaps = 37/383 (9%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
KKR + +K +L + ++GEA+L+YA + AI+L KE++R +P+ E + L +
Sbjct: 154 KKRKCTRVTK-RLPSHLQGLMGEANLRYARKERQDAINLCKEIIRQAPSYAEPFQFLSMC 212
Query: 78 HSALGNHKSAFDFYVIAAHL---SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
+ G+ + ++ +IAA+L SP+++ W +L + + D QAM + +A++A+P
Sbjct: 213 YKDQGDDEMSYQLSLIAAYLSPQSPQEADKWLRLAQVCLNRSDEVQAMKCLAKAVQADPT 272
Query: 135 DISLRIHLASFYVEIG-DYEKAAESYEQIQKLFPDN-------VDATKTGAQLFLKCGQT 186
++ + H IG + E+ ++ + P+N V+ + A+++++ G
Sbjct: 273 NLQIHEHRCRVLKSIGAEKEQLKARLTMLRGVQPENEQKKNEWVELAEKIARIYIESGNL 332
Query: 187 ARSIGILEEYLKVHPSDADLSVIDLLV--------------------AILMENNAYEKT- 225
+ L L + + +LL+ ++ NN ++
Sbjct: 333 HSARRALSNALVTCADNFKMEHFNLLLELQILTKHYLDVIKVLNRHCGLVFNNNIIDEID 392
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEV 285
L+ E ++ +ELP+ + K I + E A L + D+ +V
Sbjct: 393 LEETESMELT----EELPMGILSKLCIALIYSNKQEFAFPLIETFMEHDVESFGDIHLDV 448
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
A+ L+ AL L + ++LK A C +L AI+ F +
Sbjct: 449 AEALVEKEFHQQALTLLEILTKSKSFSQAEVWLKYANCLNALNRSDEAIVAFRHVIHLVP 508
Query: 346 DNIDARLTLASLLLEEAKEEEAI 368
DA+++LA L + + E+A+
Sbjct: 509 SREDAKISLAELFTKLGRHEDAL 531
>gi|125534021|gb|EAY80569.1| hypothetical protein OsI_35750 [Oryza sativa Indica Group]
Length = 231
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 45/63 (71%)
Query: 621 GKINSKHSKHSKFIRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPL 680
G I + S+H KF+ R + DCVPPIIISGH+FT S HQ AAR YLEAYKL PENP
Sbjct: 40 GIIEDRFSRHHKFLLRTREEKTDCVPPIIISGHRFTAISQHQSAARDYLEAYKLNPENPF 99
Query: 681 INL 683
INL
Sbjct: 100 INL 102
>gi|358333196|dbj|GAA32797.2| general transcription factor 3C polypeptide 3 [Clonorchis sinensis]
Length = 892
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 172/415 (41%), Gaps = 46/415 (11%)
Query: 10 RKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE 69
R KTRK ++ KN+LS + + LGEA F++A + + ++ +PN
Sbjct: 59 RGKTRK-------KRAPKNRLSVELAQYLGEAERFLNNDQFDEAEEICRTIIASAPNSSP 111
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
Y L + G+H+ + ++ AA +P D++LW L+ FA +K D A AM+Y + A+
Sbjct: 112 PYVVLAEIYYRRGDHEKSTEYMFEAAQRNPGDTSLWLSLIDFAEEKNDLALAMHYTKLAL 171
Query: 130 RAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD-----NVDATKTGAQLFLKCG 184
R + ++ +R L +Y G A + P+ ++ A F K
Sbjct: 172 RGDRQNSDIRRRLIQYYERAGQSRSALMLRLSALSVTPEPSGEKQFQLARSLADEFFKLM 231
Query: 185 QTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE---HAQIVRFSGKE 241
SI E + +P + + ++++++ YE L+ + + I +GK
Sbjct: 232 DRPSSIRAYESAFEKYPDSGTDADKNTTLSMMLQLRKYENALRFLLRYCNVSITTEAGKP 291
Query: 242 L--------------------------PLKLKVKAGICYLRLGNMEKAEILFADLQWKNA 275
L L +K+ + +L+L + + F L +NA
Sbjct: 292 LRWDRLADQLKHPNKYTNLTFPDTTPPELYMKLFLILIHLKLSAICIVSV-FTILTEENA 350
Query: 276 IDHADLITEVADTLMSLG-HSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAI 334
+ D + ++ + + G HS + + ++ LAE + L + AI
Sbjct: 351 EKYFDWLLDIIKSFRTYGLHSAAGEMLLELTRLESTKQIPLVWTMLAEVQVELGQVEKAI 410
Query: 335 MFFYKALDRFED-NIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSN 388
+ LD + +AR+ L LL + EEA+ L++P + + +S +SN
Sbjct: 411 SSYRHVLDTLAPRHTEARVALGGLLKRVGRHEEALDLMAPSNVIS--EQSSSRSN 463
>gi|156084464|ref|XP_001609715.1| tetratricopeptide repeat domain containing protein [Babesia bovis]
gi|154796967|gb|EDO06147.1| tetratricopeptide repeat domain containing protein [Babesia bovis]
Length = 905
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 23/180 (12%)
Query: 11 KKTRKLNKKRGRRKGSK-----------------NKLSPGVTKMLGEASLQYAYGNFEQA 53
K RKL +RGRR +K +KL+P + K++ +A+ Y GNF+ A
Sbjct: 58 KYVRKL-MRRGRRGTTKIASTTRKKRKRKTAAHASKLTPQLEKLMQQATTHYLCGNFKDA 116
Query: 54 ISLLKEVVRLSPNLPETYNTLGLAHSALGNHK-SAFDFYVIAAHLSPKDSALWKQLLTFA 112
I LKEVVR +P L + ++ LGL + N +A +Y++AAHL D LWK++ +
Sbjct: 117 IKTLKEVVRRAPGLHDPFHMLGLIYQEEYNDPVTATGYYLLAAHLVQTDLELWKRIAEMS 176
Query: 113 VQKGDTAQAMYYIRQAIR---AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
G+ QA+Y ++ +R EP + ++ LA Y+E D+ A + + L PD+
Sbjct: 177 QDLGNVDQAIYCFKKCLRNNEGEPNEEAI-FSLAMCYLEKQDHPNAIKKLHFLFDLHPDD 235
>gi|226292538|gb|EEH47958.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 878
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 167/413 (40%), Gaps = 71/413 (17%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + + P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 198 KGIKRGPRKPIEPSLEFKNLHSEATSAFIDTDYERATVLVKQAIQINPEMFAAHSLLSEI 257
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD A+W ++ +++ D + A+ Y + +
Sbjct: 258 FLAQGQKDKALAALFSGAHTRPKDPAVWMKVAKLILERAGEDRSSALQDVVYCYSRIVEI 317
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R A+ Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 318 DQKNYDIRFKRAAVYRELGHNGKAAQEYERLLKDLPHNTTALRHLAETYIDLNEVHKAKS 377
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTLQHI--------------- 229
+E + + S D S +++ N YE+ + +
Sbjct: 378 RYDESISYYTSLNLEEATDFTWSDVNIYAEFFSYLNDYEQGIFQLRSLSRWLLGRKDDTE 437
Query: 230 -----------------EHAQIVRFS---------GKELPLKLKVKAGICYLRLGNMEKA 263
A + F G LPL+L+V+ GI L+LG +
Sbjct: 438 WDDIIEDDREWDAEDFPRRADVPFFDPNKYPTESYGIGLPLELRVRLGIYRLKLGLQYRE 497
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL E D L AL YY L+ + +
Sbjct: 498 EAL-SHFSWLNPDDASEGALLYDFGDLFREAGDALKDAKLYQDALTYYQPLQRSREYADT 556
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL-----LLEEA 362
L++ +AEC + + A + ++ E+NI+AR LA L+E+A
Sbjct: 557 GLFMAIAECNTACENDEAAENCYLTVVEYDENNIEARAKLAKFYEKLGLIEQA 609
>gi|225680838|gb|EEH19122.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 1130
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 166/413 (40%), Gaps = 71/413 (17%)
Query: 20 RGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + + P + + EA+ + ++E+A L+K+ ++++P + ++ L
Sbjct: 200 KGVKRGPRKPIEPSLEFKNLHSEATSAFIDTDYERATVLVKQAIQINPEMFAAHSLLSEI 259
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--DTAQAM----YYIRQAIRA 131
A G A AH PKD A+W ++ +++ D + A+ Y + +
Sbjct: 260 FLAQGQKDKALAALFSGAHTRPKDPAVWMKVAKLILERAGEDRSSALQDVVYCYSRIVEI 319
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K+ +R A+ Y E+G KAA+ YE++ K P N A + A+ ++ + ++
Sbjct: 320 DQKNYDIRFKRAAVYRELGHNGKAAQEYERLLKDLPHNTTALRHLAETYIDLNEVHKAKS 379
Query: 192 ILEEYLKVHPS-------DADLSVIDLLVAILMENNAYEKTLQHI--------------- 229
+E + + S D S +++ N YE+ + +
Sbjct: 380 RYDESISYYTSLNLEEATDFTWSDVNIYAEFFSYLNDYEQGIFQLRSLSRWLLGRKDDTE 439
Query: 230 -----------------EHAQIVRFS---------GKELPLKLKVKAGICYLRLGNMEKA 263
A + F G LPL+L+V+ GI L+LG +
Sbjct: 440 WDDIIEDDREWDAEDFPRRADVPFFDPNKYPTESYGIGLPLELRVRLGIYRLKLGLQYRE 499
Query: 264 EILFADLQWKNA---------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L + W N D DL E D L AL YY L+ + +
Sbjct: 500 EAL-SHFSWLNPDDASEGALLYDFGDLFREAGDALKDAKLYQDALTYYRPLQRSREYADT 558
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL-----LLEEA 362
L++ +AEC + A + ++ E+NI+AR LA L+E+A
Sbjct: 559 GLFMAMAECNTVCENDEAAENCYLTVVEYDENNIEARAKLAKFYEKLGLIEQA 611
>gi|312383961|gb|EFR28824.1| hypothetical protein AND_02740 [Anopheles darlingi]
Length = 1010
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
K K+R RR L P + ++GEA+L YA G+ A L E++R P E + TL
Sbjct: 280 KSTKRRQRRF-----LPPALQGLMGEANLCYARGDTSTAKDLCLEIIRQVPLAYEPFITL 334
Query: 75 GLAHSALGNHKSAF-DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
+ GN + + +IAAHL+P D LW ++ ++++G+ QA+ +AI+ EP
Sbjct: 335 AQLYE--GNDPEQYLECSLIAAHLNPSDIELWMRVAETSIEQGNIDQALKCYTRAIKYEP 392
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTAR 188
K++ LR+ A + GD ++A + Y + L P + K A+ F +
Sbjct: 393 KNVDLRLKRARLTEKKGDEKQAFKYYYDMLPLIPKEQAEFLICTAKRVAKKFHEESNIGA 452
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI--EHAQI 234
++ +E P + I+LL+ +L+ N Y++ L HI HA +
Sbjct: 453 ALEAMERAYTTAPELFSIEDINLLLELLIANGLYQRAL-HILSTHAHV 499
>gi|401411779|ref|XP_003885337.1| hypothetical protein NCLIV_057320 [Neospora caninum Liverpool]
gi|325119756|emb|CBZ55309.1| hypothetical protein NCLIV_057320 [Neospora caninum Liverpool]
Length = 1320
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH-SALGNH 84
+ +++ P + K++GEA+ Y G F++A+ +L+++VR +P L + ++ LGL + A G+
Sbjct: 113 TPSEMPPALKKLMGEATDAYLSGEFDRAVQILEDIVRQAPGLHDPFHLLGLIYEEAYGDK 172
Query: 85 KSAFDFYVIAAHL-SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
+ A DFY++AAHL P D LW+ + + ++Q G+ QA+Y R+ +R
Sbjct: 173 RRAVDFYLLAAHLVVPGDPELWRHIGSMSLQLGNLPQAVYCFRRCLR 219
>gi|443915185|gb|ELU36749.1| TPR_2 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 884
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 152/345 (44%), Gaps = 57/345 (16%)
Query: 11 KKTRKLNKKRGRRKGSKN-KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE 69
++ + K R +G + LS V LG+A YA G+ E AI LL++V+ + P +
Sbjct: 109 RQATGIGKFWQRARGPRQVHLSQEVNHFLGQAHSAYASGDRETAIKLLQDVIAIEPGIAN 168
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
+ TL + +G+ A ++AAHL D W +L + + G QA+Y R A
Sbjct: 169 AWATLAFCYEDVGDTSRALKLRIMAAHLE-GDVDQWAELGLKSREIGSMEQAVYCYRNAA 227
Query: 130 RAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARS 189
R + + + A E G +KA ++YE I ++ P ++ L ++ G +R+
Sbjct: 228 RLDKTNPDVLWDYAFCLRESGQTQKAIKTYESILQILPHDLTILSQLRGLLIQTGDLSRA 287
Query: 190 I----GILEEYLKVHP------SDADLSVIDLLVA------ILMENNAYE----KTLQHI 229
+ E Y+ P + AD+ VID L+A ++ N++ TL +
Sbjct: 288 MEYYYAAFEHYITSAPQPAISETRADM-VIDPLLASSSAPEMVDTTNSFGLREIATLADL 346
Query: 230 -----EHAQ----IVRFS---------------GKELPLKLKVKAGICYLRLGNMEKAE- 264
EHA+ ++R + G+ L + L+++ + LRLG +E +
Sbjct: 347 LSGLGEHARAVDVVIRGAEWLGQVPKGSDELSIGERLDVNLRMRLAVAKLRLGVIEAGKD 406
Query: 265 ----ILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFL 305
IL D+ ++ +L TE+AD +GH A+ Y L
Sbjct: 407 HAYIILAHDVN-----EYYELHTELADVFYEIGHYEDAVTIYERL 446
>gi|328856427|gb|EGG05548.1| hypothetical protein MELLADRAFT_107373 [Melampsora larici-populina
98AG31]
Length = 1007
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
+KT + K+R + + +LS V+ +LG+A+L + +++AI L +E VR+ P
Sbjct: 69 EKTLRSGKRRRHKIRGEPELSTEVSILLGKANLCFINQEYQEAIPLFEEAVRIEPMCKMA 128
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
+N LG + L + + + F +I AHL+ K LWK+L + Q G +QA+Y +AI+
Sbjct: 129 WNNLGAIYQDLNDFEKSCQFRMIGAHLTAKSEHLWKELGAESRQHGLLSQAIYCFSEAIK 188
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
D+ + E+G +A Y I KL P N D + A L C T
Sbjct: 189 VGKDDVEAMWDRSYLLYEVGRPRQALLGYLSILKLNPYNPDVLREIAHL---CATT 241
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 245 KLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHF 304
+ + GIC L++G+ E+A+ F ++ + ++ +DL + DT + AL++Y
Sbjct: 381 EFRTYLGICRLKIGDEEEAKAHFDLIKELSILEFSDLFLMIGDTYFDSDMFHEALEFYQE 440
Query: 305 LETNAGTDNGYLYLKLAECY 324
L N T+N ++ K+ +CY
Sbjct: 441 LVDNESTNNPSVWHKIGQCY 460
>gi|321258354|ref|XP_003193898.1| RNA polymerase III transcription factor [Cryptococcus gattii WM276]
gi|317460368|gb|ADV22111.1| RNA polymerase III transcription factor, putative [Cryptococcus
gattii WM276]
Length = 1005
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 176/417 (42%), Gaps = 65/417 (15%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
+++ K +K+ RR +K S V +LG+A+ Y ++++AIS EV+RL P +P
Sbjct: 97 RRSGKTLQKQPRRA---HKPSHEVNYLLGQANGAYLVEDYDKAISSFLEVIRLDPYVPAA 153
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
+ TL + LG+ + A + AH+ + LW++L + G Q++Y +R+A++
Sbjct: 154 WVTLSSCYKELGDEEKARQMRFLGAHVD-DEGDLWRELAQEFKEIGHLEQSVYCLRKALK 212
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYE---QIQKLFPDNVDATKTGAQLFLK----- 182
EP I L L + Y G + + QI+ +N++ T T L +
Sbjct: 213 CEPDQIDLLWDLGAIYRIQGQKTRGCNVFRAMLQIEPELANNLEFTSTFHPLLVSMNLRG 272
Query: 183 -CGQTARSIGILEEYLKVHPSDAD----------------LSVIDLLVAILMENNAYEKT 225
QTAR + + +PS + +++ID L+A+ YE
Sbjct: 273 LAAQTARR--GFDYQITTYPSPSQRPRVPDASPPMTYENIITLIDDLLAL----EEYEDA 326
Query: 226 LQHIEHAQI-----------------------------VRFSGKELPLKLKVKAGICYLR 256
L ++ Q V G E+ + ++ + + ++
Sbjct: 327 LVVVKQGQRWLQGRAEQKGWDTMDDDREYDPPGTIREEVESEGFEMDVGMRHRLALSRIK 386
Query: 257 LGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFL-ETNAGTDNGY 315
L ++ +A I L + + H + E+ D LM+ AL + + E D+
Sbjct: 387 LDDIHEANIHINFLLSLDVLTHYTYLQELGDALMTRDRWERALDCFAAVQECEELPDDPP 446
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
L K+ C + + A+ DN++A+L +A++L + ++ EA+ +++
Sbjct: 447 LIYKIGVCQWKMGDLEEALEALQWVASEVPDNLEAKLRIANVLEDMGRKAEALDIVT 503
>gi|393245485|gb|EJD52995.1| TPR-like protein [Auricularia delicata TFB-10046 SS5]
Length = 1022
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 162/410 (39%), Gaps = 72/410 (17%)
Query: 10 RKKTRKLNKKRGRRKGSKNK--LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNL 67
RK T K G+RK + LS V +LG+A+ Y F++AI++L+EV+++ P
Sbjct: 114 RKVTGIGKVKGGKRKARRTAPLLSQQVKSLLGDATTAYVDREFDKAITVLQEVIKIEPRH 173
Query: 68 PETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQ 127
+ ++ L H+ LG+ F ++AAHL P D W L + ++G QA+Y ++
Sbjct: 174 AQAWDMLADVHNELGDVDRGLQFKILAAHLRP-DPGEWMHLAGRSQERGHLQQALYCYKK 232
Query: 128 AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
A +P ++ A +GD A ++ I FP ++ + + G
Sbjct: 233 AHSLDPHNVDAMWERAQLSTRLGDLRGARSAFLAILFKFPHDLSVLFELQNIIVSLGDIQ 292
Query: 188 RSIGILEE----YLKVHPSDADLSVIDLLVAILMEN-----------NAYEKTLQHIEHA 232
I + E+ Y+ +PS S D L A + + Y +H +
Sbjct: 293 TGIKLFEDALTHYMSAYPSG---SATDHLGADVPGGGFGVGAVVTLADFYNVAGEHEKAI 349
Query: 233 QIVR-----------------------FSGKELPLKLKVKA----------------GIC 253
VR F + +P +++V+ I
Sbjct: 350 HAVRGGMRWLQGRVEQRFWDAMPDDREFDVEGMPKRVQVEGARTGGYPLSLNARHRLAIA 409
Query: 254 YLRLGNMEKAE-----ILFADL-QWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLET 307
L+LG++E+A+ IL D+ +W A L E+AD AL Y L
Sbjct: 410 RLKLGDIEEAKAHANVILAGDIREW------ATLYGEIADAYFEQRLFEDALPIYERLTE 463
Query: 308 NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
N T + +++ C +L A + L + D +A++ LA +
Sbjct: 464 NEETSSIEAVMRIGACRRNLGNFKEAAEVYQHLLAQMPDYKEAKMKLAEV 513
>gi|315041551|ref|XP_003170152.1| hypothetical protein MGYG_07396 [Arthroderma gypseum CBS 118893]
gi|311345186|gb|EFR04389.1| hypothetical protein MGYG_07396 [Arthroderma gypseum CBS 118893]
Length = 1049
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 174/420 (41%), Gaps = 62/420 (14%)
Query: 19 KRGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
+R R+G + P V + EA+ + ++++A+ L+K+ + L+P + + + L
Sbjct: 103 RRVPRRGPLRPVEPTVEFKNIQSEATSAFIDADYDRALDLVKQAIHLNPEIFQAHVLLSE 162
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA------MYYIRQAIR 130
A G K A AH K +W ++ +++ D+ +A +Y + I
Sbjct: 163 IFLAQGQKKKALYALFTGAHTRRK-PEIWLEVANLILERADSDRAAALDDVVYCYSRVID 221
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR-- 188
+PK +R A+ E+G KA + YE+I + P N +A + A L+++ G+ +
Sbjct: 222 IDPKRHDIRFERAAINEELGYKGKAVQEYEKILEFLPHNTNALRPLAALYIELGEIGKAK 281
Query: 189 ---------SIGIL-EEYLKVHPSDADLSVI------DLLVAILMENNAYEKTLQHIEHA 232
++G+ EE SD ++ V + L IL N+ L E A
Sbjct: 282 AHYERCISYNMGLRPEEVEDFTWSDVNIYVELFSYEHNYLSGILSLNSLARWLLGRKEDA 341
Query: 233 QI-----------------------------VRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ G LPL+L++K G+ L+ G ++A
Sbjct: 342 SWDLIDDDREWDADDYPRRSATPWFVPGQYPLESYGIGLPLELRIKLGVYRLKTGYKDEA 401
Query: 264 EILFADLQWKNA------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLY 317
F L+ ++ D+ DL E AD++ + AL++Y L+ N L+
Sbjct: 402 LFHFNWLEPEDNSPGAKLFDYGDLFREAADSMKDIQLYEEALRFYIPLQHVQDFANTSLF 461
Query: 318 LKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDL 377
L LAECY + + + + + NI+AR LA + ++A+ ++ D+
Sbjct: 462 LALAECYDACGNKEETERCYLTVAEYDKTNIEARTKLAHFYEKMGMTDQALKYITEAADI 521
>gi|399216351|emb|CCF73039.1| unnamed protein product [Babesia microti strain RI]
Length = 859
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 23/239 (9%)
Query: 3 LINYGGYRKKTRKLNKKRGRRKGSKN-------KLSPGVTKMLGEASLQYAYGNFEQAIS 55
LI+ G + KL K R R KG K +++P KML +A+ Y +QA++
Sbjct: 64 LIDKGNRKFWDAKL-KGRSRGKGVKGPKPKTAAEMTPQAEKMLQDATELYLSNKIDQAVA 122
Query: 56 LLKEVVRLSPNLPETYNTLGLAHSA-LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQ 114
LKE+V+ +P L + ++ LG+ + + SA +Y++AAHL+P D LWKQ+ ++
Sbjct: 123 ALKELVKQAPGLHDPFHILGVIYEQEYKDLPSACAYYLLAAHLAPDDVELWKQISEMSMS 182
Query: 115 KGDTAQAMYYIRQAIRAEPK--DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
G+ QA+Y +++ ++ D L+ Y+ G Y++A+ ++ L P++
Sbjct: 183 LGNIDQAVYCLKKCLKNSRGKFDEEALYELSMIYLNSGKYKEASTHLTRLFSLRPEDYAV 242
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
T + A+ G ILE ++ + S A L+ E NA ++L+H+ H
Sbjct: 243 TDSFARCRRLMGDDRMMCDILEAHVSSYASAAPLA----------EENA--ESLKHVPH 289
>gi|448088257|ref|XP_004196501.1| Piso0_003723 [Millerozyma farinosa CBS 7064]
gi|448092390|ref|XP_004197532.1| Piso0_003723 [Millerozyma farinosa CBS 7064]
gi|359377923|emb|CCE84182.1| Piso0_003723 [Millerozyma farinosa CBS 7064]
gi|359378954|emb|CCE83151.1| Piso0_003723 [Millerozyma farinosa CBS 7064]
Length = 975
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 185/423 (43%), Gaps = 60/423 (14%)
Query: 7 GGYRKKTRK--LNKKRGRRKGSKN---KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
G ++ K +K +K +RK +N +L+P V L A+ + +F+ A+ L +EV+
Sbjct: 91 GNFKSKNKKKYASKSYWKRKMMRNTDRELNPEVRFNLSRANEAFVKNDFQSALKLYEEVI 150
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
+ P Y TLG + G+ + +++AA++ P D+ W + + Q G QA
Sbjct: 151 KQDPKNFSAYKTLGEIYKQQGDLDKCCNLWILAAYIQPYDTQFWCNIAELSTQLGHLDQA 210
Query: 122 MYYIRQAIRAE-PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLF 180
++ +A++++ K+ ++ + A Y E Y +A E ++++ + +P + + K A ++
Sbjct: 211 IHCYGRALQSDSSKNSNIILQRALLYKERRQYGRALEGFQRLHQKYPTDSNVVKHLASVY 270
Query: 181 LKCGQTARSIGILEEYLKVH---PSDA-------DLSVIDLLVAILMENNAYEKTLQHIE 230
++ + +I + L + PS++ + +++L + M+ ++Y+ I+
Sbjct: 271 VEQKRINDAINLYITILDKNIYPPSNSKDQYPVFGWAELNILCELYMQQHSYKSCRDGIK 330
Query: 231 HAQIV-------------------------RF------------SGKE----LPLKLKVK 249
+IV RF KE LP+ ++ K
Sbjct: 331 TIKIVSRWIQNRTDESWWDKIDDDSEFDKRRFLILKTLSASQQARAKEKFYDLPIDIRFK 390
Query: 250 AGICYLRLGNMEKAEIL-FADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETN 308
G C+ RLG +K E L D + D +DL+ E +L + G+ AL + +
Sbjct: 391 LG-CF-RLGVDQKDESLRHFDYLLEETDDISDLLFEAGKSLEAHGYYEEALTFLTRASVS 448
Query: 309 AGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
+ L L +C+L + + A + L +N+DA+L LA +E+I
Sbjct: 449 DEQNGPELISLLGKCFLEVGDYQQAQEAYKSLLVSDYENLDAKLALAEAYYHLGNRQESI 508
Query: 369 TLL 371
LL
Sbjct: 509 NLL 511
>gi|327298373|ref|XP_003233880.1| hypothetical protein TERG_05748 [Trichophyton rubrum CBS 118892]
gi|326464058|gb|EGD89511.1| hypothetical protein TERG_05748 [Trichophyton rubrum CBS 118892]
Length = 1050
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 173/422 (40%), Gaps = 66/422 (15%)
Query: 19 KRGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
+R R+G + P + EA+ + ++++A+ L+K+ + L+P + + + L
Sbjct: 102 RRVPRRGPLKPVEPTAEFKNLQSEATSAFIDADYDRALDLVKQAIHLNPEIFQAHVLLSE 161
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA------MYYIRQAIR 130
A G + A AH K +W ++ +++ D+ +A +Y + I
Sbjct: 162 IFLAQGQKRKALYALFTGAHTRRK-PEVWLEVANLILERADSDRAAALDDVVYCYSRVID 220
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+PK +R A+ E+G KA + YE+I + P N +A + A L+++ G+ ++
Sbjct: 221 IDPKRYDVRFERAAINEELGYKGKAIQEYEKILESLPHNTNALRPLAALYIELGEIGKAR 280
Query: 191 GILEE----YLKVHPSDA-DLSVIDLLVAILMENNAYE---------------------- 223
E Y+ ++P + D + D V I +E +YE
Sbjct: 281 AHYERCISYYINLNPDEVEDFTWSD--VNIYVELFSYEHDYLAGISSLNSLARWLLGRKG 338
Query: 224 ----------------------KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNME 261
T + + G LPL+L++K GI L+ G +
Sbjct: 339 DSGWDMVDDDREWDADDYPRRTATPWFVPGQYPLESYGIGLPLELRIKLGIYRLKSGYKD 398
Query: 262 KAEILFADLQWKNA------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY 315
+A F L+ ++ D+ DL E AD++ + AL++Y L+ N
Sbjct: 399 EALFHFHWLEPEDNSPGAKLFDYGDLFREAADSMKDIQLYEDALRFYIPLQHVQDFANTS 458
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPK 375
L+L +AECY S + + + + NI+AR LA + ++A+ ++
Sbjct: 459 LFLAMAECYDSCGDTEETERCYLTVAEYDKTNIEARTKLAHFYEKMGMTDQALKFITEAA 518
Query: 376 DL 377
D+
Sbjct: 519 DI 520
>gi|344301205|gb|EGW31517.1| hypothetical protein SPAPADRAFT_139986 [Spathaspora passalidarum
NRRL Y-27907]
Length = 975
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 166/424 (39%), Gaps = 66/424 (15%)
Query: 10 RKKTRKLNK------KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRL 63
R + KLNK KR + +L P V L +A+ + +F+ A SL EV++
Sbjct: 96 RNRREKLNKASKSYYKRKMMRADNRELDPEVRSNLSQANEAFVRNDFQVAQSLYTEVIKK 155
Query: 64 SPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMY 123
P Y TLG G +++++AA++ P D+ W + + G T QA+Y
Sbjct: 156 DPRNFSAYKTLGEIFKQQGKLNECCNYWLLAANIHPWDTEFWGNVAELSADLGYTDQAVY 215
Query: 124 -YIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP--------------- 167
Y R + K + A Y E Y KA E +++++L+P
Sbjct: 216 CYTRAITQDVVKSAPYILERAILYKERRQYGKALEGLQKVRQLYPADSNILKHLAGVYVD 275
Query: 168 ----------------DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
N+ Q++ K G +I +LE +++ H L+++ L
Sbjct: 276 QKRLNDAINLYVKVLDSNIHPDPDNEQIYPKFGWAELNI-LLELHIQHHSWKTGLNILKL 334
Query: 212 LVAILM------------ENN----------AYEKTLQHIEHAQIVRFSGKELPLKLKVK 249
+ EN+ A EK +E A+ R +LP+ ++ K
Sbjct: 335 TARWIQNRQNETWWNDPPENDAEFDMKRRMEAIEKLPDEVERAE-ARTKSYDLPIDIRFK 393
Query: 250 AGICYLRLG-NMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETN 308
G +LRLG M++ I D ++ D ADL + L G+ AL + N
Sbjct: 394 LG--HLRLGLGMKEEAIHHFDFLLEDEEDIADLYFDAGKVLEEHGYHEEALTFLTRATLN 451
Query: 309 -AGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEA 367
+N L L +C+ + + A + L +N+D +L LA L E A
Sbjct: 452 DEFNENPELINLLGKCFFEVGDYTQAKQAYETLLHNEPENLDFKLALAETLYHLGDEAGA 511
Query: 368 ITLL 371
+L+
Sbjct: 512 ESLI 515
>gi|405122808|gb|AFR97574.1| RNA polymerase III transcription factor [Cryptococcus neoformans
var. grubii H99]
Length = 984
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 177/415 (42%), Gaps = 59/415 (14%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
+++ K ++K+ RR +K S V +LG+A+ Y ++++AIS EV+RL P +P
Sbjct: 97 RRSGKASQKQPRRA---HKPSHEVNYLLGQANGAYLVEDYDKAISSFLEVIRLDPYVPAA 153
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
+ TL + LG+ + A + AH+ + LW++L + G Q++Y IR+A++
Sbjct: 154 WVTLSSCYKELGDEEKARQMRFLGAHVD-DEGDLWRELAQEFREIGHLEQSVYCIRKALK 212
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYE---QIQKLFPDNVDATKTGAQLFLK----- 182
EP I L L + Y G + + QI+ +N + T L +
Sbjct: 213 CEPDQIDLLWDLGAMYRIQGQKTRGCNVFRAMLQIEPELANNFEFISTFHPLLVSMNLRG 272
Query: 183 -CGQTARSIGILEEYLKVHPSDA------DLSV------IDLLVAILMENNAYEKTLQHI 229
QTAR + + +PS + D+S I L+ L+ YE L +
Sbjct: 273 LVAQTARR--GFDYQIATYPSPSQRPRVPDVSPPMTYENIITLIDDLLTLEEYEDALVVV 330
Query: 230 EHAQI-----------------------------VRFSGKELPLKLKVKAGICYLRLGNM 260
+ Q V G E+ + ++ + + ++L ++
Sbjct: 331 KQGQRWLQGRAEQKGWDTMDDDREYDPPGTIREEVESEGFEMDVGMRHRLALSRIKLDDV 390
Query: 261 EKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFL-ETNAGTDNGYLYLK 319
+A I L + + H + E+ D LM+ AL + + E D+ L K
Sbjct: 391 HEANIHIDHLLSLDVLTHYTYLQELGDALMTRDQWERALDCFAAVQECEELPDDPPLIYK 450
Query: 320 LAECYLSLKERAHAI--MFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
+ C + + A+ + + K DN++A+L +A++L + ++ EA+ +++
Sbjct: 451 IGVCQWKMGDLEEALEALQWGKLASEVPDNLEAKLRIANVLEDMGRKAEALDIVT 505
>gi|326484708|gb|EGE08718.1| hypothetical protein TEQG_07677 [Trichophyton equinum CBS 127.97]
Length = 1049
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 171/425 (40%), Gaps = 72/425 (16%)
Query: 19 KRGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
+R R+G + P + EA+ + ++E+A+ L+K+ + L+P + + + L
Sbjct: 102 RRAPRRGPLKPVEPTAEFKNLQSEATSAFIDADYERALDLVKQAIHLNPEIFQAHVLLSE 161
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK--GDTAQAM----YYIRQAIR 130
A G + A AH K +W ++ +++ GD A A+ Y + I
Sbjct: 162 IFLAQGQKRKALYALFTGAHTRRK-PEVWLEVANLILERADGDRAAALDDVVYCYSRVID 220
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+PK +R A+ E+G KA + YE+I + P N +A ++ A L+++ G+ ++
Sbjct: 221 IDPKRYDIRFERAAINEELGYKGKAIQEYEKILEGLPHNTNALRSLAALYIELGEIGKAR 280
Query: 191 GILEE----YLKVHPSDA-DLSVIDLLVAILMENNAYE---------------------- 223
E Y+ ++P + D + D V I +E +YE
Sbjct: 281 AHYERCISYYMNLNPEEVEDFTWSD--VNIYVELFSYEHDYLAGISSLNSLARWLLGRKG 338
Query: 224 ----------------------KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNME 261
T + + G LPL+L++K G+ L+ G
Sbjct: 339 DSGWDMVDDDREWDADDYPRRIATPWFVPGQYPLESYGIGLPLELRIKLGVYRLKSGY-- 396
Query: 262 KAEILFADLQW---------KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
K E LF QW D+ DL E AD++ + AL++Y L+
Sbjct: 397 KDEALF-HFQWLEPDDNSPGAKLFDYGDLFREAADSIKDIQLYEDALRFYIPLQHVQDFA 455
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
N L+L +AECY + + + + NI+AR LA + ++A+ ++
Sbjct: 456 NTSLFLAMAECYDACGNTEETERCYLTVAEYDKTNIEARTKLAHFYEKMGMTDQALKFIT 515
Query: 373 PPKDL 377
D+
Sbjct: 516 EAADI 520
>gi|326475042|gb|EGD99051.1| hypothetical protein TESG_06411 [Trichophyton tonsurans CBS 112818]
Length = 1049
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 171/425 (40%), Gaps = 72/425 (16%)
Query: 19 KRGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
+R R+G + P + EA+ + ++E+A+ L+K+ + L+P + + + L
Sbjct: 102 RRAPRRGPLKPVEPTAEFKNLQSEATSAFIDADYERALDLVKQAIHLNPEIFQAHVLLSE 161
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK--GDTAQAM----YYIRQAIR 130
A G + A AH K +W ++ +++ GD A A+ Y + I
Sbjct: 162 IFLAQGQKRKALYALFTGAHTRRK-PEVWLEVANLILERADGDRAAALDDVVYCYSRVID 220
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+PK +R A+ E+G KA + YE+I + P N +A ++ A L+++ G+ ++
Sbjct: 221 IDPKRYDIRFERAAINEELGYKGKAIQEYEKILEGLPHNTNALRSLAALYIELGEIGKAR 280
Query: 191 GILEE----YLKVHPSDA-DLSVIDLLVAILMENNAYE---------------------- 223
E Y+ ++P + D + D V I +E +YE
Sbjct: 281 AHYERCISYYMNLNPEEVEDFTWSD--VNIYVELFSYEHDYLAGISSLNSLARWLLGRKG 338
Query: 224 ----------------------KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNME 261
T + + G LPL+L++K G+ L+ G
Sbjct: 339 DSGWDMVDDDREWDADDYPRRIATPWFVPGQYPLESYGIGLPLELRIKLGVYRLKSGY-- 396
Query: 262 KAEILFADLQW---------KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
K E LF QW D+ DL E AD++ + AL++Y L+
Sbjct: 397 KDEALF-HFQWLEPDDNSPGAKLFDYGDLFREAADSIKDIQLYEDALRFYIPLQHVQDFA 455
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
N L+L +AECY + + + + NI+AR LA + ++A+ ++
Sbjct: 456 NTSLFLAMAECYDACGNTEETERCYLTVAEYDKTNIEARTKLAHFYEKMGMTDQALKFIT 515
Query: 373 PPKDL 377
D+
Sbjct: 516 EAADI 520
>gi|158289897|ref|XP_311521.3| AGAP010426-PA [Anopheles gambiae str. PEST]
gi|157018379|gb|EAA07253.3| AGAP010426-PA [Anopheles gambiae str. PEST]
Length = 872
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 205/463 (44%), Gaps = 56/463 (12%)
Query: 5 NYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS 64
N G + K+ +R RR L + ++G+A+L YA G+ A L E++R
Sbjct: 133 NLQGSPRTEGKVTLRRQRRF-----LPAALQGLMGQANLCYARGDVRTAEDLCMEIIRQV 187
Query: 65 PNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYY 124
P E + TL H + + + + IAAHL+P D+ W ++ +++GD +A+
Sbjct: 188 PLAHEPFITLAQIHE-MDDPEKYLQYSQIAAHLNPSDAEQWARVAEIFIERGDIDEALKC 246
Query: 125 IRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQL 179
++IRA PK+I +R+ A +E D ++A + Y + P + K A+
Sbjct: 247 YTRSIRANPKNIDMRLKRARL-METRDEKQAFKYYYNMLPYIPKEQADFLISIAKRVAEK 305
Query: 180 FLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE-HAQI---- 234
F K + ++ +++ + ++ I+LLV +L+ N Y + L + HA +
Sbjct: 306 FHKETNVSAALDAMQQAYRTAKEKFNMEDINLLVELLIANGHYRRALDILAVHANVELHN 365
Query: 235 ------------VRFS---GKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDH- 278
FS ++ L L+ K + + L K E F D + + H
Sbjct: 366 YDMGAAEGTQLSPNFSIDIPDDIVLDLRTKLAVVLVHL----KCEQCF-DKAIDDILTHI 420
Query: 279 -----ADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
D +VA+ LM+ H + AL+ L + ++L+ A+C ++ A
Sbjct: 421 DPENAGDCYLDVAEALMNEEHYHQALRLLVPLIKSKKFSLAAVWLRYADCSRCIENYDEA 480
Query: 334 IMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLN 393
I+ + K + ++DARL LA+LL ++ K +EA L +L+ + DK +L+
Sbjct: 481 IVGYEKVIS-LAHHLDARLALAALLKKQGKYDEA---------LQALEQDPDKE---YLD 527
Query: 394 EKIIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKV 436
+++ + C + G + F+ A F L+ RQ + V
Sbjct: 528 PEVLHERCLLLHEVGRYQQFLAAGFMLLARHCYQIRKRQDIAV 570
>gi|237830651|ref|XP_002364623.1| general transcription factor IIIC, putative [Toxoplasma gondii
ME49]
gi|211962287|gb|EEA97482.1| general transcription factor IIIC, putative [Toxoplasma gondii
ME49]
gi|221507499|gb|EEE33103.1| general transcription factor IIIC, putative [Toxoplasma gondii VEG]
Length = 695
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH-SALGNHKSAFDFYVIA 94
K++GEA+ Y FE+A+ +L+++VR +P L + ++ LGL + A G+ + A DFY++A
Sbjct: 252 KLMGEATDAYLREEFEKAVQILEDIVRQAPGLHDPFHLLGLIYEEAFGDKRRAVDFYLLA 311
Query: 95 AHL-SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
AHL P D LW+ + + +VQ G+ QA+Y R+ +R
Sbjct: 312 AHLVVPGDPELWRHIGSMSVQLGNLPQAIYCFRRCLR 348
>gi|221487705|gb|EEE25937.1| general transcription factor IIIC, putative [Toxoplasma gondii GT1]
Length = 694
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH-SALGNHKSAFDFYVIA 94
K++GEA+ Y FE+A+ +L+++VR +P L + ++ LGL + A G+ + A DFY++A
Sbjct: 252 KLMGEATDAYLREEFEKAVQILEDIVRQAPGLHDPFHLLGLIYEEAFGDKRRAVDFYLLA 311
Query: 95 AHL-SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
AHL P D LW+ + + +VQ G+ QA+Y R+ +R
Sbjct: 312 AHLVVPGDPELWRHIGSMSVQLGNLPQAIYCFRRCLR 348
>gi|427723072|ref|YP_007070349.1| hypothetical protein Lepto7376_1152 [Leptolyngbya sp. PCC 7376]
gi|427354792|gb|AFY37515.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 356
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+ +P + +L + + NF AI + +L + Y+ LG AH+ LGN + A
Sbjct: 27 RANPELDALLQQGNEAVQNQNFAMAIERYADAAQLETDNARIYSGLGYAHAQLGNFQEAA 86
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAV-QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y A L D+ + Q L F++ GD A+ +A+ +P ++ + LA+ +
Sbjct: 87 IAYQRAVQLE-NDNPQFYQALGFSLGNSGDYTNAINAYSRAVELKPDNVDFNLGLATVFF 145
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
G YE+A +Y+++ +L P+N DAT+ L+ + ++ +L+ + P+D DL
Sbjct: 146 RSGRYEQALSAYQRVLQLNPNNTDATRNSIASLLQLRRNQDAVALLDNAFRKLPTDGDLR 205
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKV 248
V + + + +K + ++ A+ R S ++ ++LKV
Sbjct: 206 VQAAVTWFGLGDK--DKAIAFLDEAR--RLSPRDFKVQLKV 242
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG A++ + G +EQA+S + V++L+PN + + L ++ A A
Sbjct: 138 LGLATVFFRSGRYEQALSAYQRVLQLNPNNTDATRNSIASLLQLRRNQDAVALLDNAFRK 197
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P D L Q GD +A+ ++ +A R P+D +++ +A Y Y +A
Sbjct: 198 LPTDGDLRVQAAVTWFGLGDKDKAIAFLDEARRLSPRDFKVQLKVARIYENQQIYVEAIH 257
Query: 158 SYEQIQKLFPDNVDA 172
++++ +L P + +A
Sbjct: 258 AFQRATELNPQSTEA 272
>gi|302037836|ref|YP_003798158.1| hypothetical protein NIDE2523 [Candidatus Nitrospira defluvii]
gi|300605900|emb|CBK42233.1| conserved protein of unknown function, contains TPR repeats
[Candidatus Nitrospira defluvii]
Length = 567
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 15/294 (5%)
Query: 10 RKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE 69
R + R+ K GR+ G + T +L EA L + G ++A + ++ +P P+
Sbjct: 3 RNERRRDEKLHGRQAGGADV----STALLREAQLHHQAGRLDEAERAYRSLLERAPAQPD 58
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
+ LGL GN K A + A P++ W + G T A+ QAI
Sbjct: 59 ALHGLGLLTYRRGNLKDALGWLAKACAAGPRNPVYWFNHGVVLQRAGRTVDAVEAYGQAI 118
Query: 130 RAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARS 189
+ P+ I R +L + Y E+G A +YEQ+ L PD+ +A + + G+ +
Sbjct: 119 QWNPRYIEARTNLGNAYKELGRLADAQAAYEQVLTLNPDHAEAHNNLGVVLKEQGRLDEA 178
Query: 190 IGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA-QIVRFSGKELPLKLKV 248
+ + PS A+ + L +L+E + ++ E A QIV G L
Sbjct: 179 AESYRRAIALKPSHAEAQ--NNLGLVLLEQGRLDDAIRCFERALQIVPGYGTAL-----Y 231
Query: 249 KAGICYLRLGNMEKAEILFADL-QWKNAIDHADLITEVADTLMSLGHSNSALKY 301
GI ++ +M +A FA+ Q K+A H +TE A L H L+Y
Sbjct: 232 NLGIAWIWREDMPRALRCFAETAQAKHA--HGRPVTETAVFRSRLKHDAEQLQY 283
>gi|302507696|ref|XP_003015809.1| hypothetical protein ARB_06121 [Arthroderma benhamiae CBS 112371]
gi|291179377|gb|EFE35164.1| hypothetical protein ARB_06121 [Arthroderma benhamiae CBS 112371]
Length = 1049
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 171/422 (40%), Gaps = 66/422 (15%)
Query: 19 KRGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
+R R+G + P + EA+ + ++E+A+ L+K+ + L+P + + + L
Sbjct: 102 RRVPRRGPLKPVEPTAEFKNLQSEATSAFIDADYERALDLVKQAIHLNPEIFQAHVLLSE 161
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA------MYYIRQAIR 130
A G + A AH K +W ++ +++ D+ +A +Y + I
Sbjct: 162 IFLAQGQKRKALYALFTGAHTRRK-PEIWLEVANLILERADSDRAAALDDVVYCYSRVID 220
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+PK +R A+ E+G KA + YE+I + P N +A + A L+++ G+ ++
Sbjct: 221 IDPKRYDIRFERAAINEELGYKGKAIQEYEKILEGLPHNTNALRPLAALYIELGEIGKAR 280
Query: 191 GILEE----YLKVHPSDA-DLSVIDLLVAILMENNAYE---------------------- 223
E Y+ ++P + D + D V I +E +YE
Sbjct: 281 AHYETCISYYMNLNPEEVEDFTWSD--VNIYVELFSYEHQYLAGISSLNSLARWLLGRKG 338
Query: 224 ----------------------KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNME 261
T + + G LPL+L++K G+ L+ G +
Sbjct: 339 DSGWDMVDDDREWDADDYPRRIATPWFVPGQYPLESYGVGLPLELRIKLGVYRLKSGYKD 398
Query: 262 KAEILFADLQWKNA------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY 315
+A F L+ + D+ DL E AD++ + AL++Y L+ N
Sbjct: 399 EALFHFHWLEPDDNSPGAKLFDYGDLFREAADSMKDIQLYEDALRFYIPLQHVQDFANTS 458
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPK 375
L+L +AECY + + + + NI+AR LA + ++A+ ++
Sbjct: 459 LFLAMAECYDACGNTEETERCYLTVAEYDKTNIEARTKLAHFYEKMGMTDQALKFITEAA 518
Query: 376 DL 377
D+
Sbjct: 519 DI 520
>gi|294659232|ref|XP_461590.2| DEHA2G01210p [Debaryomyces hansenii CBS767]
gi|199433806|emb|CAG90036.2| DEHA2G01210p [Debaryomyces hansenii CBS767]
Length = 982
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 175/429 (40%), Gaps = 71/429 (16%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KR + + +L P V L +A+ + +F+ A++L EV++ P Y TLG +
Sbjct: 113 KRKMMRSTNRELDPEVRINLSQANEAFVRNDFQVALNLYLEVIKKDPKNFSAYKTLGEIY 172
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PKDIS 137
G + +++AA++ P DS W + + + G QA+Y +AI ++ K+
Sbjct: 173 KQQGRLHKCCNAWLLAANIHPWDSQFWGNVAELSSELGHIDQAIYCYGRAIASDNTKNAK 232
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK--------------- 182
+ A Y E Y +A E ++++ +++P + K A ++++
Sbjct: 233 FILERAFLYKEKKQYGRALEGFQKVHQVYPADTSIIKNLASVYVEQKRINDAINLYMRIL 292
Query: 183 ------CGQTARSI--------GIL-EEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
GQ +S+ IL E YL+ H + VI LVA ++N EK
Sbjct: 293 DSNISPTGQPKQSVPRFGWAELNILCELYLQQHSWKIGIKVIK-LVARWIQNRTDEKWWD 351
Query: 228 HIEH-----------------AQIVRFSGK--ELPLKLKVKAGICYLRLGNMEKAEIL-F 267
++ +Q R K LP+ ++ K G LRLG +K E +
Sbjct: 352 EVDDDSEFDKRRFAVIKGLSPSQQARSKEKFYNLPIDIRFKLG--SLRLGLEQKEETMRH 409
Query: 268 ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETN-AGTDNGYLYLKLAECYLS 326
+ + D ADL E +L + G AL + N ++ L LA+C+L
Sbjct: 410 FEYLLEETEDIADLYFEAGKSLEAHGFHEEALTFLTRASLNDEQNESPELVSLLAKCFLE 469
Query: 327 LKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLL--------------- 371
+ + A + L DN+D +L LA + E+++ LL
Sbjct: 470 VGDYIQAQQAYSSLLYGDPDNLDFKLALAETFYHLGESEKSVKLLEEVTIATEKSGAGKA 529
Query: 372 -SPPKDLDS 379
S P DLD+
Sbjct: 530 DSIPNDLDN 538
>gi|406602376|emb|CCH46085.1| Transcription factor tau subunit [Wickerhamomyces ciferrii]
Length = 1009
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 7 GGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
+R K R +KKR R K ++ +L P V +L A+ + G +++A EV++L P
Sbjct: 101 NNFRVKKRG-DKKRPRAKPTR-ELDPEVMMLLSVANEFFVDGRYDEAEEKFLEVIKLDPR 158
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
Y TLG + A + + +AAHL+P D W+ + + G AQA+Y
Sbjct: 159 NFSAYKTLGEIYDRQDLKNKACNAWFLAAHLNPADGRNWEFVARVSRDLGHLAQALYCYG 218
Query: 127 QAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
+A+ A+ K + A Y E+G ++ E+++++QK++P D + A ++++ +
Sbjct: 219 RALTAKHKTYDVLYQRALLYREVGQLGRSLENFQKLQKIYPGESDVVRELALIYIQLNRV 278
Query: 187 ARSIGILEEYLKVH 200
+I + YLK++
Sbjct: 279 NDAIAM---YLKIY 289
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 232 AQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMS 291
+ +++ +LP+ ++VK G LRL + E+A I F L ++ + ADL ++ L
Sbjct: 390 SDVLKTRSHKLPIDIRVKLGSLRLRLNHTEEALIHFGFLLNEDLEEMADLYSDAGTKLEE 449
Query: 292 LGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDAR 351
+ + A+K+Y L L+ L C+ L + A ++ A + +NID +
Sbjct: 450 VQLFSDAVKFYLPLSRLDEFQIPELFTSLGRCFTELGKYEDAKEYYSFAQELDPENIDIQ 509
Query: 352 LTLASLL--LEEAKEEE 366
L L +L LEE +E +
Sbjct: 510 LALVEVLYYLEEFEESQ 526
>gi|134116644|ref|XP_772994.1| hypothetical protein CNBJ2700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255614|gb|EAL18347.1| hypothetical protein CNBJ2700 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1004
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 170/413 (41%), Gaps = 57/413 (13%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
+++ K +K+ RR +K S V +LG+A+ Y ++++AIS EV+RL P +P
Sbjct: 97 RRSGKAPQKQPRRA---HKPSHEVNYLLGQANGAYLVEDYDKAISSFLEVIRLDPYVPAA 153
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
+ TL + LG+ + A + AH+ + LW++L + G Q++Y IR+A++
Sbjct: 154 WVTLSSCYKELGDEEKARQMRFLGAHVD-DEGDLWRELAQEFREIGHLEQSVYCIRKALK 212
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYE---QIQKLFPDNVDATKTGAQLFLK----- 182
EP I L L + Y G + + QI+ +N + T L +
Sbjct: 213 CEPDQIDLLWDLGAIYRIQGQKTRGCNVFRAMLQIEPELANNFEFISTFHPLLVSMNLRG 272
Query: 183 -CGQTARSIGILEEYLKVHP--------SDADLSV----IDLLVAILMENNAYEKTLQHI 229
QT R + + +P SDA + I L+ L+ YE L +
Sbjct: 273 LVAQTTRR--GFDYQIATYPSPNQRPRVSDAPPPMTYENITTLIDDLLALEEYEDALVVV 330
Query: 230 EHAQI-----------------------------VRFSGKELPLKLKVKAGICYLRLGNM 260
+ Q V G E+ + ++ + + ++L +
Sbjct: 331 KQGQRWLQGRAEQKGWDTMDDDREYDPPGTIREEVESEGFEMDVGMRHRLALLRIKLDDA 390
Query: 261 EKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFL-ETNAGTDNGYLYLK 319
+A+I L + + H + E+ D LM+ AL + + E D+ L K
Sbjct: 391 HEADIHIDHLLSLDVLTHYTYLQELGDALMTRDQWERALDCFGAVQECEELPDDPPLIYK 450
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
+ C + + A+ DN++A+L +A++L + ++ EA+ + +
Sbjct: 451 IGVCQWKMGDLDEALEALQWVASEVPDNLEAKLRIANVLEDMGRKAEALDIFA 503
>gi|19075424|ref|NP_587924.1| transcription factor TFIIIC complex subunit Sfc4
[Schizosaccharomyces pombe 972h-]
gi|74676083|sp|O74458.1|SFC4_SCHPO RecName: Full=Transcription factor tau subunit sfc4; AltName:
Full=TFIIIC subunit sfc4; AltName: Full=Transcription
factor C subunit 4
gi|3560268|emb|CAA20753.1| transcription factor TFIIIC complex subunit Sfc4
[Schizosaccharomyces pombe]
Length = 1006
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 169/384 (44%), Gaps = 61/384 (15%)
Query: 7 GGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSP 65
G+RK RK +K RGR + S V +ML A+ +A GNF++A L +E+VR+
Sbjct: 106 AGFRK-VRKGHKGRGRVSRADMLPSVEVQQMLSLANHLFAQEGNFDEAQKLAEEIVRIDN 164
Query: 66 NLPETYNTLGLAHSALGNHKSAFD----FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
N+ + LG H GN + + ++ AAHL PKD LW + QA
Sbjct: 165 NVIAAWKMLGECHRQRGNGRVNIEKCLIAWMAAAHLKPKDHELWFTCAKLSESLEFWDQA 224
Query: 122 MYYIRQAIRAEPKDIS-LRIHLASFYV---EIGDYEKAAESYEQIQKLFPDNVDATKTGA 177
Y +A+ A+P + S L+ ++ + V E G +KAAE ++ + + P N K A
Sbjct: 225 DYCYNRAVSAKPPNKSELKKYIWNRSVLNKEHGSLKKAAEGFKFLLQSSPYNASILKNLA 284
Query: 178 QLFLKCG---QTARSIGILEEYLKVHPSDA------DLSVIDLLVAILMENNAYEKTLQH 228
++++K + + I +Y +P+ DL ++L +L+ ++ + ++
Sbjct: 285 EIYIKIHAPREILKQFEIAWKYFYQYPAPPIGNDIFDLPTLNLYAELLLLDHQWSNLIRL 344
Query: 229 IEHAQIVRFSGKE-------------------------------------LPLKLKVKAG 251
I + F G++ LP + K G
Sbjct: 345 INRG-VRWFRGRKSESFWDEFDDDREWDVDERRREFPNASEEHTNKEAYLLPHLFRTKLG 403
Query: 252 ICYLRLGNMEKAEILFADLQWKN-AIDHA-DLITEVADTLMSLGHSNSALKYYHFLETNA 309
I L+ G + +AE+ F+ + KN D+A ++ ++A M + + AL+Y+ + +
Sbjct: 404 IARLKTGELPEAELHFSVI--KNLPPDYAWGMLYDIAKAYMDIERLDLALEYFVLICNHE 461
Query: 310 GTDNGYLYLKLAECYLSLKERAHA 333
N L+ + CYL LKE HA
Sbjct: 462 PAQNIGLWYNMGVCYLELKEYEHA 485
>gi|195024058|ref|XP_001985802.1| GH20885 [Drosophila grimshawi]
gi|193901802|gb|EDW00669.1| GH20885 [Drosophila grimshawi]
Length = 906
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 187/435 (42%), Gaps = 42/435 (9%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
++L+ + ++GEA+L +AYG ++ A + E++R +P E + TL + K
Sbjct: 158 SQLNAALVGLMGEANLSFAYGRYDTAERICMEIIRQNPLASEPFYTLAEIYENRDEVKF- 216
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
F IAAHL+P+D +W ++ VQ+G A+A ++I+ KD LR+ A
Sbjct: 217 LHFSTIAAHLNPQDRDMWIRISDLLVQQGHLARARVCYTKSIKVLHKDYVLRLRKAQLLE 276
Query: 148 EIGDYEKAAESYEQIQKLFPDN-----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+G+ A +Y ++ L P + + K A+ F + ++ +E V S
Sbjct: 277 RMGETNAAMFTYLKMLPLMPSSEWSLCLSTGKNVARYFHVLEKHHIALEAMEGAYSVCGS 336
Query: 203 DADLSVIDLLVAILMENNAYEKTLQHIEH-------------AQIVRFSG--KELPLKLK 247
+ +++ + +L+ N + K L+ + +++ F ++ +L+
Sbjct: 337 RFTVEDLNIYLELLILNKQFIKVLRCLRERTKLELETEQEETLELIYFCHIPEDYVPELR 396
Query: 248 VKAGICYLRLGNMEKAEILFADLQ--WKNAIDHADLITEVADTLMSLGHSNSALKYYHFL 305
K + + L L ++Q ++ +L ++ + LM A+ +
Sbjct: 397 AKLCVSLIHLHAHHLLGYLVQNVQEYITPTVERVELYMDITEALMQEHKYAEAIALMRPI 456
Query: 306 ETNAGTD-NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKE 364
D +++L+ AEC L AI + + + +A+ TL++LL + ++
Sbjct: 457 TDADSFDCPAFVWLRQAECLRQLNRTNEAIQSYGRVVQLAPYCYEAKFTLSALLKQLGRQ 516
Query: 365 EEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKGMPEDFVDAIFPLVCES 424
EEA+ L S + L+ +++ + C + + G E+FVD + L+
Sbjct: 517 EEAVKALE----------QSGEQEGQPLHARLLYERCIMLQQIGRIEEFVDVGYVLLG-- 564
Query: 425 LCVEALRQKVKVKRR 439
R +K+K R
Sbjct: 565 ------RHSIKLKNR 573
>gi|150865142|ref|XP_001384242.2| hypothetical protein PICST_67675 [Scheffersomyces stipitis CBS
6054]
gi|149386398|gb|ABN66213.2| RNA pol III initiation factor TFIIIC subunit [Scheffersomyces
stipitis CBS 6054]
Length = 980
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 57/416 (13%)
Query: 10 RKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE 69
+K T K +R + L P V + +A+ +A+ +++ A +L EVVRL
Sbjct: 108 KKSTAKSFYRRKVTQSENRDLDPEVRSYMSQANEAFAHNDYQVARNLYLEVVRLDKKNYN 167
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
Y TLG G ++ IAA+L P DS W + + Q G T QA++ +AI
Sbjct: 168 AYKTLGEISQHQGKLNQCCSYWFIAANLRPWDSKFWGDVAELSTQLGHTDQALFCYNRAI 227
Query: 130 RAE-PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
+E K + A Y EI + +A E ++++++ +P + K A ++++ +
Sbjct: 228 SSEHKKSARFILQRALVYKEIKQFGRALEGFQRVRQQYPTDASIVKNLAAVYVEQKRLND 287
Query: 189 SIGILEEYL--KVHPSDAD--------LSVIDLLVAILMENNAY---------------- 222
+I + L +HP+ + + +++L+ + ++ +++
Sbjct: 288 AINLYMRILDSNIHPNPQNKQKYPKFTWAELNILLELYVQQHSWRVAIKVTRLAARWIQG 347
Query: 223 -EKTLQHIEHAQIVRFSGK-----------------------ELPLKLKVKAGICYLRLG 258
EK E+ F K ELP+ ++ K GI LRLG
Sbjct: 348 REKETWWDENDDDSEFDPKRRNEVIDKLTDTAKKAEAKEKPFELPIDIRYKIGI--LRLG 405
Query: 259 NMEKAEILFA-DLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH--FLETNAGTDNGY 315
++ E L + + DL+ E L G+ AL++ + G
Sbjct: 406 LDQRDEALHHFEFLLDEQSEIPDLLKETGKALEENGYHEEALQFLTRAIFPEDTGEQLEL 465
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLL 371
+ L L +CYL + + + A + L + N+D +L LA L +E ++ LL
Sbjct: 466 VNL-LGKCYLEIGDYSQAKSAYTDLLTQDSKNLDYKLALAEALYHLGEEVDSKKLL 520
>gi|254565831|ref|XP_002490026.1| One of six subunits of the RNA polymerase III transcription
initiation factor complex (TFIIIC) [Komagataella
pastoris GS115]
gi|238029822|emb|CAY67745.1| One of six subunits of the RNA polymerase III transcription
initiation factor complex (TFIIIC) [Komagataella
pastoris GS115]
gi|328350432|emb|CCA36832.1| Transcription factor tau subunit sfc4 [Komagataella pastoris CBS
7435]
Length = 1007
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 9/187 (4%)
Query: 7 GGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
GG R++ K R +L P V +L +A+ + G+ + A EV++
Sbjct: 123 GGMAAMKRRMRKDR--------ELDPEVRMLLSQANEAFVRGDLQVAQETYGEVIKKDSK 174
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMY-YI 125
Y TLG + G ++IAAHL DS W + + Q G T+QA+Y Y
Sbjct: 175 SFSAYKTLGEIYKIQGLLNKCVTLWIIAAHLHSWDSEFWSMVAELSYQLGHTSQAIYCYS 234
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
R ++ KD+ A Y E+G Y +A+ES++++ + P N K A ++LK +
Sbjct: 235 RGISASDHKDLKAIFDRAVIYREVGQYGRASESFQKLFHIMPTNSTILKELALVYLKQKR 294
Query: 186 TARSIGI 192
+ +I +
Sbjct: 295 ISDAIAL 301
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
LP+ ++++ G LRL ++A I F L + ADL EV +L +G + ALK+
Sbjct: 405 LPIDIRIQLGFFRLRLKENDEALIHFGYLMDSAIENTADLYLEVGTSLEKIGLFHEALKF 464
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
L N L + +A C + ++ A + DNID L+LA +
Sbjct: 465 LSPLSELEPYHNVELIMIIARCLVETEDYTQAKAAYLSLAQNDPDNIDVLLSLAEVCFHL 524
Query: 362 AKEEEAITLL 371
+ EEA L
Sbjct: 525 GENEEANQLF 534
>gi|346971343|gb|EGY14795.1| hypothetical protein VDAG_06285 [Verticillium dahliae VdLs.17]
Length = 971
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 178/431 (41%), Gaps = 74/431 (17%)
Query: 12 KTRKLNKKRGRR-KGSKNKLSP--GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLP 68
+T++ GR + ++ +L P + L E + + G++ +A + E++R++
Sbjct: 58 RTKRGKSTVGRHSRTNRKELEPRADIKLRLAEVNRTFLNGDYPEAERRIHEIIRINAETY 117
Query: 69 ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV-QKGDT------AQA 121
+ + TL G A + A+HL PKD++ W A+ GD A
Sbjct: 118 QAWMTLATICEEQGRDSDALTAKLYASHLRPKDASGWLSCAALALGMAGDDDDSPALKTA 177
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
A+ A+P +I R+ A G KA Y + FP ++ + A+
Sbjct: 178 GTCFASAVLAQPTNIEARLGRAEVNHRRGHLTKAIREYSIVLDRFPHDISLVRKLAE--- 234
Query: 182 KCGQTARSIGILEE----------YLKVHPSDA-------DLSVIDLLVAILME------ 218
C + +RS ++ YL+ P D+ D+S+ L+A L +
Sbjct: 235 AC-EASRSPEHVQRAVDAYQAYFAYLQQKPCDSESAIFWGDVSIYAELLACLGDFAQAVK 293
Query: 219 -------------NNAY----EKTLQHIEHA-----QIVRFS---------GKELPLKLK 247
++A+ +K + +H QI F G LPL+L+
Sbjct: 294 QISSLSRWLLSRHDDAFWLCWDKDDREWDHESTRREQIPGFDTSTYELHLYGSGLPLELR 353
Query: 248 VKAGICYLRLGNMEKAE--ILFADLQWKNAIDHAD----LITEVADTLMSLGHSNSALKY 301
+ G+ L++G+ E++ +L+ D D LI ++AD L S G + AL Y
Sbjct: 354 ARLGLYRLKMGDQEESSRHLLWLDPTESATASAVDDFPGLIRDIADALNSSGDALRALDY 413
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
Y L + + L L L C+L+ + A F + + NIDAR+ LA + +
Sbjct: 414 YELLRNSVYGQDPDLLLDLGRCHLTKGDTGAAEDCFLLTIQVDDSNIDARIELAKIYEDA 473
Query: 362 AKEEEAITLLS 372
++EEA+ L++
Sbjct: 474 REDEEALILVT 484
>gi|255726682|ref|XP_002548267.1| hypothetical protein CTRG_02564 [Candida tropicalis MYA-3404]
gi|240134191|gb|EER33746.1| hypothetical protein CTRG_02564 [Candida tropicalis MYA-3404]
Length = 782
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 169/410 (41%), Gaps = 69/410 (16%)
Query: 10 RKKTRKLNK---KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
R+K K +K KR + +L P V L +A+ + +F A +L EV++
Sbjct: 94 REKISKSSKNYYKRKMMRADNRELDPEVRSNLSQANEAFVRKDFGTAETLYLEVIKKDAK 153
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
+ LG + A G+ +++++AA++ P D+ W Q+ + + G QA+Y
Sbjct: 154 NFTAFKALGEIYQAQGDFNKCCNYWLLAANIHPWDTEFWGQVAELSSELGYIDQAIYCYG 213
Query: 127 QAIRAE-PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP------------------ 167
+AI ++ K + A Y E + KA E ++++++L+P
Sbjct: 214 RAITSDVRKSCDFILQRALLYQERKQFGKALEGFQKVRQLYPQDSNIIKYLASVYSEQKR 273
Query: 168 -------------DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
+N+D K +LF K +I +LE +L+ H L+V+ L
Sbjct: 274 LNDAINLYMKVLDNNIDPNKESGELFPKFDWAELNI-LLELHLQNHSWRMGLNVLKLTSR 332
Query: 215 ILMENNAYEKTL----QHIEHAQIVRFS----------------GKELPLKLKVKAGICY 254
+ N E+T + +E + RF ELP+ ++ K G C
Sbjct: 333 WIQ--NRTEETWWSEDEDLEFDTVQRFQVLDGLSEDQRVEAKDKAFELPIDIRFKLG-C- 388
Query: 255 LRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD-- 312
LRLG +K + + + D ADL E L G+ LK+ T A D
Sbjct: 389 LRLGLKQKRVAMVSFDYLIDEQDVADLHFEAGKLLEEHGYYEDGLKFL----TKAYEDEQ 444
Query: 313 -NGYLYLK--LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLL 359
G L L LA CY + + + + + L +N+D +L+LA LL
Sbjct: 445 FQGSLELTELLARCYFEVGDYKQSRYAYEELLQHDPNNLDFKLSLAESLL 494
>gi|429852225|gb|ELA27371.1| RNA polymerase iii transcription factor tfiiic subunit
[Colletotrichum gloeosporioides Nara gc5]
Length = 940
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 174/437 (39%), Gaps = 71/437 (16%)
Query: 10 RKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE 69
R K + RG R+ ++ + + L + + G +++A +L+ E++R++ +
Sbjct: 77 RSKAATRSTIRGPRQAAEPR--GDIKFRLARVNQAFMSGEYDRARNLVFEIIRINAETHQ 134
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV------QKGDTAQAMY 123
+ L G+ A VIAAHL PKD W +FA+ Q G A+
Sbjct: 135 AWTVLASIFREEGHSDKALMAMVIAAHLRPKDGPGWMSCASFAMSLAEEGQDGALKTALM 194
Query: 124 YIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
A++A+P ++ R+ A G +A + + + P ++ + A+
Sbjct: 195 CYSSAVKAQPTNLDARLGRAEASQAQGFLSQAIAEFSYVLERRPFDIGIVRRLAEACADL 254
Query: 184 G---QTARSIGILEEYLKVHPSDADLSVIDLL----VAILME--------NNAY------ 222
G R++ + Y H D D L V I +E NA
Sbjct: 255 GGAEDVERAVVAYQTYF-THAHAEDRGAGDELSWHDVGIFVELFACAGDYANAILQLKSL 313
Query: 223 --------------------EKTLQHIEHAQIVRFS---------GKELPLKLKVKAGIC 253
E +H QI F G LPL+ + + +
Sbjct: 314 SRWMLGRRNEGLWDECVDDREWDREHTRRLQIPAFDPSAYDLYTYGLGLPLEFRARLALY 373
Query: 254 YLRLGNMEKAEILFADLQWKNAIDHAD---------LITEVADTLMSLGHSNSALKYYHF 304
L++ + +++++ L+W + + A LI ++AD L + + AL YY
Sbjct: 374 RLKIRDDQESDL---HLRWLDPTESATATAVQDFPYLIRDIADELYMVPRISEALDYYEL 430
Query: 305 LETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKE 364
L + + L L+L CYL+ + A A F A+ E NIDAR+ LA + + +E
Sbjct: 431 LRHSIYGQDATLLLQLGRCYLARSDLAAAEDCFLVAIQVDETNIDARIELARIYEKAKEE 490
Query: 365 EEAITLLSPPKDLDSLD 381
EEA+ LLS LD ++
Sbjct: 491 EEALILLSEAAALDRIN 507
>gi|170100703|ref|XP_001881569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643528|gb|EDR07780.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1038
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 154/387 (39%), Gaps = 53/387 (13%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
K++GR G LS V ++G+ + Y N +A+ +++EV+R+ P ++ L
Sbjct: 116 KRKGRTTGPV--LSQQVRALIGDGNQAYVDSNLPEAVRIMQEVIRIEPRAAGAWSVLAQC 173
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
+ + K A ++AAHL D+ W +L + + G QA+Y R+ +P ++
Sbjct: 174 YEDMEQGKKALQLRIMAAHLR-HDADEWDRLARQSREHGYNQQALYCYRKVYSLDPTNVD 232
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL---- 193
AS EIGD+ A ++ I K FP ++ + + ++ + +L
Sbjct: 233 ALWDRASLAKEIGDFRTARNAFTAILKQFPHDLTVLRELHAILVELSELPTCADLLQTAF 292
Query: 194 EEYLKVHPSDADL----SVIDLLVAILMENNAYEKTLQHIEHA----------------- 232
E Y +++P+ ++ + LL + +EK Q I
Sbjct: 293 EHYQRIYPTPSESIFTKLDLLLLADLYNALGEHEKAAQTIRRGTRWLQGRAEQRYWDLCE 352
Query: 233 ----------------------QIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADL 270
Q RF EL + + + +++G +E+ ++ +
Sbjct: 353 DDREYDMDGWPGRSVIGEGGGIQAGRF---ELDANARHRLAVARIKMGEIEEGKLHANAV 409
Query: 271 QWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKER 330
++ +D+A L E+AD A Y L + T + Y+ ++ A C L+E
Sbjct: 410 LAQDILDYAVLFAEIADAYFEREMCAEAKPIYELLGADPATSSIYILIQTAACMKMLEEL 469
Query: 331 AHAIMFFYKALDRFEDNIDARLTLASL 357
A + + DA++ LA +
Sbjct: 470 REAAEVYEHIRQADPTHNDAKMKLAEI 496
>gi|170108959|ref|XP_001885687.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639267|gb|EDR03539.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1078
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 156/386 (40%), Gaps = 51/386 (13%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
K++GR G LS V ++G+ + Y N +AI +++EV+R+ P ++ L
Sbjct: 179 KRKGRTTGPV--LSQQVRSLIGDGNQAYVDSNLPEAIRMMQEVIRIEPRAASAWSVLAQC 236
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
+ + + A ++AAHL D+ W +L + + G QA+Y R+ +P ++
Sbjct: 237 YEDMEQGQKALQLRIMAAHLR-HDADEWDRLARQSREHGYNQQALYCYRKVYSLDPTNVD 295
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE--- 194
AS EIGD+ A ++ I K FP ++ + + ++ + +L+
Sbjct: 296 ALWDRASLAKEIGDFRTARNAFTSILKRFPHDLTVLRELHTILVELSELPTCADLLQAAF 355
Query: 195 -EYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGK------------- 240
Y +++P+ + I + +L+ + Y +H + AQ +R +
Sbjct: 356 DHYQRIYPTPS--QTIFTKLDLLLLADLYNALGEHEKAAQTIRRGTRWLQGRAEQRYWDL 413
Query: 241 -----------------------------ELPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
EL + + + +++G +E+ ++ +
Sbjct: 414 CEDDREYDMDGWPARSVIGEGGGIQAGRYELDANARHRLAVARIKMGEIEEGKLHANAVL 473
Query: 272 WKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERA 331
++ +D+A L E+AD A Y L + T + Y+ L+ A C L+E
Sbjct: 474 AQDILDYAVLFAEIADAYFEREMYAEAKPIYELLGADPATSSIYILLQTAACMKMLEELR 533
Query: 332 HAIMFFYKALDRFEDNIDARLTLASL 357
A + + DA++ LA +
Sbjct: 534 EAAEVYEHIRQADPTHNDAKMKLAEI 559
>gi|242802947|ref|XP_002484076.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Talaromyces stipitatus ATCC 10500]
gi|218717421|gb|EED16842.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Talaromyces stipitatus ATCC 10500]
Length = 1108
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 168/418 (40%), Gaps = 66/418 (15%)
Query: 20 RGRRKGSKNKLSPGVT-KML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P KML +A+ + G++++AI L+++ + ++P + ++ L
Sbjct: 151 KGIKRGPRRPLEPSPEFKMLHSQATEAFIDGDYDRAIDLVQKAILVNPEMFAAHSLLSEI 210
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQ-----AMYYIRQAIRA 131
A G A AH P+D +W ++ + G+ Q +Y + I
Sbjct: 211 FLARGEKDKAVSALFSGAHTRPRDPTVWHKVARLIQDRAGEDRQKTLNDMIYCYSRIIEI 270
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+ K + R A+ Y E+G +AA YE+I K P N+ A + A+ ++ +++
Sbjct: 271 DSKSYNARFQRAAAYRELGYNGRAATEYERILKELPHNIRALRHLAETYIDMKDVRKALQ 330
Query: 192 I----LEEYLKVHPSD------ADLSVIDLLVAILMENNA-------------------- 221
+E Y+ + + +D+++ L A + E A
Sbjct: 331 YYLESIEYYMSLDNDENMEFSWSDVNICAELYAFVGEPEAGLQLLSSVSRWLLGRKDDKI 390
Query: 222 ------------------YEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
KT I +A + G LP++L++K G L+LG
Sbjct: 391 WDEYIDDDREWDAGDSPRRIKTDGFIPNAYPIDSYGLGLPMELRIKLGTFRLKLGERYFE 450
Query: 264 EILFADLQWKN---------AIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L A +W N D+ADL E AD L AL++Y L+ +
Sbjct: 451 EAL-AHFEWLNPDDTSESSTVFDYADLYREAADALKDSALFPEALRFYRPLQLTEDYADV 509
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
+L + EC + + + A + + N+ +R+ LA L + + A+ ++
Sbjct: 510 SFFLAMGECAFACSDLSLAESCYLTVAENDSTNLQSRVNLAKLYETMGERDRALYFVN 567
>gi|212540064|ref|XP_002150187.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Talaromyces marneffei ATCC 18224]
gi|210067486|gb|EEA21578.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Talaromyces marneffei ATCC 18224]
Length = 1127
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 167/414 (40%), Gaps = 66/414 (15%)
Query: 20 RGRRKGSKNKLSPGVT-KML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+G ++G + L P KML +A+ + G++++AI L+++ + ++P + ++ L
Sbjct: 167 KGIKRGPRRPLEPSPEFKMLHSQATEAFIDGDYDRAIELVQQAILVNPEMFAAHSLLSEI 226
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQ-----AMYYIRQAIRA 131
A G A AH P+D +W ++ + G+ Q +Y + I
Sbjct: 227 FLARGEKDKAVTALFSGAHTRPRDPTVWYKVARLIQDRAGENRQKTLNDMIYCYSRIIEI 286
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK--------- 182
+ K + R A+ Y E+G +AA YE+I K P N+ A + A+ ++
Sbjct: 287 DGKSYNARFQRAAAYRELGYNGRAAGEYERILKELPHNIRALRHLAETYIDMQDVHKALE 346
Query: 183 ---------------------------CGQTARSIGILEEYLKVHPSDA-------DLSV 208
C + +G + L++ S A D ++
Sbjct: 347 YYLAGIEYYMSLDNDENMEFSWSDVNICAELYAYVGDPRKGLQLLSSVARWLLGRKDDTI 406
Query: 209 IDLLVAILMENNAYE-----KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
D + E +A + KT I + + G LP++L++K G L+LG+
Sbjct: 407 WDDYIDDDREWDAADSPRRIKTDGFIPGSFPIDSYGLGLPMELRIKLGTFRLKLGDRYVE 466
Query: 264 EILFADLQW---------KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
E L A +W D+ADL E AD L G AL++Y L+ +
Sbjct: 467 EAL-AHFEWLSPEDDSENSTVFDYADLYREAADALKDAGLFKEALRFYRPLQLTEDYADV 525
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
+L + EC + + + A + + N+ +R+ LA L + ++A+
Sbjct: 526 SFFLAMGECAFACSDLSLAESCYLTVAENDSANLQSRVNLAKLYETMGERDQAL 579
>gi|296818251|ref|XP_002849462.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238839915|gb|EEQ29577.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 1043
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 190/453 (41%), Gaps = 71/453 (15%)
Query: 23 RKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
R+G + P + EA+ + ++E+A+SL+K+ + L+P + + + L A
Sbjct: 99 RRGPLKPVEPSAEFKTLQSEATSAFIDADYERALSLVKKAIHLNPEIFQAHVLLSEIFLA 158
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA------MYYIRQAIRAEPK 134
G K A AH + ++ +W ++ +++ D +A +Y + I + K
Sbjct: 159 QGQKKKALYALFTGAH-TRRNPEVWLEVANLILERADEDRAAVLDDVLYCYSRVIDIDQK 217
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
LR A+ E+G KAA+ YE+I + P N +A + A L+++ G ++ E
Sbjct: 218 RYDLRFERAAINEELGYKGKAAQEYEKILEGLPYNTNALRPLAALYIELGDIGKAKAQYE 277
Query: 195 EYLKVHPS-------DADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRF-------SGK 240
+ + S + S +++ V + ++ Y+ + ++ + R+ SG
Sbjct: 278 NCIAHYMSLSLEEVQEFTWSDVNIYVELFSYDHNYQAGISSLK--ALARWLLGRKGDSGW 335
Query: 241 EL-----------------------------------PLKLKVKAGICYLRLGNMEKAEI 265
+L PL+L+VK GI L++ ++A
Sbjct: 336 DLIDDDREWDADDYPRRATTPWFVPGQYPLESYGIGLPLELRVKLGIYRLKMRYKDEALF 395
Query: 266 LFADLQWKNA------IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLK 319
F L+ ++ D+ DL E AD++ AL++Y L+ N L+L
Sbjct: 396 HFHWLEPEDNSPGAKLFDYGDLFREAADSMKDSQLYEDALRFYAPLQHVQDFANTSLFLA 455
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDS 379
+AECY + + A + + + NI+AR LA + ++A+ ++ D+
Sbjct: 456 MAECYGACGNQEEAERCYLTVAEYDKTNIEARTKLAYFYEKMGMTDQALKYVTEAADIGR 515
Query: 380 LDMNSDKSNPWWLNEKIIMKLCHIYR--AKGMP 410
++ S + + N I +L +R +G+P
Sbjct: 516 EEVMSRRKPRFGPN---IAQLAKYFRDTERGLP 545
>gi|345564672|gb|EGX47632.1| hypothetical protein AOL_s00083g140 [Arthrobotrys oligospora ATCC
24927]
Length = 1097
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 165/401 (41%), Gaps = 54/401 (13%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
K R+ N K+GRR S V +LG+A+ YA G + + + L++ V+ + P +
Sbjct: 181 KAARRANAKKGRRAAQDMAHSHEVQALLGQANQHYAAGEWPETLKLVQRVIHIDPEVYSA 240
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW----KQLLTFAVQKG-----DTAQA 121
+ +G + A+ + ++ AAH+ ++ LW + L +Q+G +A
Sbjct: 241 WKVMGEVYLAINEPRKCLLAWISAAHVRHREGDLWVTCARMTLDLELQEGMKEDEVKEEA 300
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ-IQKLFPDNVDATKTGAQLF 180
+Y +AI+A PKD + + E+ + +A+ + + ++K+ P + K+ Q
Sbjct: 301 IYLYGKAIKANPKDWTSIFERGNLLQELEKFGRASLDFRKLLEKILPHDTSVVKSLTQCL 360
Query: 181 LKCGQTARSIGILEEYLKVHPSD---------------ADLSVID--------------- 210
+ + +I E +L S+ DL I
Sbjct: 361 IGMNRVDEAITTFESHLPFWISERGRDGGLDWKHVNMLGDLCAIGKRWSHGIRQVKTLCR 420
Query: 211 LLVAILME------------NNAYEKTLQHIEHAQIVRFSGK--ELPLKLKVKAGICYLR 256
LL+A E ++ E+ LQ A R + +LP +L+ K G ++
Sbjct: 421 LLLARGTETFWDEIRNDCEWDDDDERRLQISGFANGARRGPESYQLPPELRFKLGQFRMK 480
Query: 257 LGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYL 316
+G+ E+ F L+ ++ + DL+ D+ G A+ + L L
Sbjct: 481 IGHFEEGWRHFEILRKEDVVVIGDLLLSAGDSCAEAGKHEEAVDLWFPLTEVELFQTVDL 540
Query: 317 YLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
+L+L + Y L+ +A ++ ++++++RL L +
Sbjct: 541 WLRLGKSYKILRNWENARRCLECVVEFKDNDLESRLLLIEI 581
>gi|67516251|ref|XP_658011.1| hypothetical protein AN0407.2 [Aspergillus nidulans FGSC A4]
gi|40747350|gb|EAA66506.1| hypothetical protein AN0407.2 [Aspergillus nidulans FGSC A4]
gi|259489350|tpe|CBF89548.1| TPA: RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative (AFU_orthologue; AFUA_1G04980) [Aspergillus
nidulans FGSC A4]
Length = 1077
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 162/413 (39%), Gaps = 67/413 (16%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KRG RK + SP + EA+ + G++++AI L++ ++++P + ++ L
Sbjct: 140 KRGPRKPVEP--SPEFKLLHSEATSAFIDGDYDRAIDLVRRAIQVNPEMFAAHSLLSEIF 197
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALW-KQLLTFAVQKGDTAQA-----MYYIRQAIRAE 132
A G + A AH P+D+ +W K Q GD QA +Y + + +
Sbjct: 198 LAQGEKEKAVTALFSGAHTRPRDTTVWLKVARMITEQAGDDRQAVLNDVLYCYSRVLEID 257
Query: 133 PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
P++ + R A+ Y +G +A YE+I + P NV A + + Q +++
Sbjct: 258 PQNHNTRFQRAALYRGLGHNGRAVTEYERILRDLPHNVRALRLLTDTLSEQNQYQKALDY 317
Query: 193 LEE----YLKVHPSD------ADLSVIDLLVAILMEN----------------------- 219
E Y+ P + +D ++ L L +
Sbjct: 318 WSESIQHYMAQEPEETPEFTWSDANIYIELYTYLGRHAEGLKAAKAVSRWLLGRKDDTMW 377
Query: 220 NAYEKTLQHIEHAQIVR---------------FSGKELPLKLKVKAGICYLRLGNMEKAE 264
+ +++ + +HA R G LPL+ ++K G+ L+L E
Sbjct: 378 DDFDEDDREWDHADFPRRIKADGYIPKQWPPDSYGPGLPLEFRIKLGLFRLKLPERHINE 437
Query: 265 ILFADLQWKN---------AIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY 315
L +W D+ DL E AD L AL++Y ++ D +
Sbjct: 438 ALHH-FRWLKPEDTSDGSLVYDYGDLFREAADALKDAEMFEDALRFYRPIQKTEYADVSF 496
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
++ + +C+ SL E A + + NI++R+ LA L E+A+
Sbjct: 497 -FMAMGDCFKSLGELEDAENCYLTVAEHDTSNIESRVQLAKLYESIGMTEQAL 548
>gi|354543593|emb|CCE40313.1| hypothetical protein CPAR2_103510 [Candida parapsilosis]
Length = 987
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 178/432 (41%), Gaps = 55/432 (12%)
Query: 10 RKKTRKLNKKRGRRK---GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
R+K K NK R++ +L P V L A+ + + + A L +V++ P
Sbjct: 110 REKLSKNNKSYYRKRMMRADNRELDPEVRMNLSLANEAFVRNDLQVAQQLYVDVIKKDPK 169
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
Y +G + + G +++AA+L P DS W Q+ + + G QA+Y
Sbjct: 170 NFSAYKAIGEIYKSQGKLDECCSSWLLAANLHPWDSDFWGQVAELSNELGHIDQAIYCYT 229
Query: 127 QAIRAEPK-DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
+AI ++ K + + A Y E + KA + +++I++L+P + + K A ++ + +
Sbjct: 230 RAITSDTKRSANFILERALLYKEKRQFGKALDGFQKIRQLYPQDTNIIKYLAGVYSEQKR 289
Query: 186 TARSIGILEEYL--KVHPSDAD-----------------------------LSVIDLLVA 214
+I + L ++P DAD ++V+ L
Sbjct: 290 LNDAINLYMRILDQNINP-DADSEEQYPKFDWPELNILLELHVQHRSLKLGINVLKLAAR 348
Query: 215 IL---MENNAYE-------------KTLQHIEHAQIVRFSGK--ELPLKLKVKAGICYLR 256
+ M+ ++ K L H++ + + F K +LP+ ++ K G L
Sbjct: 349 WIQGRMDETWWDESDDSEFDSKRRFKKLSHLKSSDLADFKSKPYDLPIDIRFKLGTLRLG 408
Query: 257 LGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY- 315
L E+A F L N + ADL E L G+ AL + N + +
Sbjct: 409 LNQKEEAMHHFEYLLDDNQAEIADLNFEAGKQLQEFGYYEEALTFLTRAFGNEELVSSFD 468
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPK 375
L L +CY + + A A + + L +N+D +L LA L + +A +L++ +
Sbjct: 469 LVTLLGKCYFEIADYAEAKEAYEELLSHSPNNVDFKLALAETLYHLGDDIQAESLINEVQ 528
Query: 376 DLDSLDMNSDKS 387
+ ++ DK+
Sbjct: 529 AANQKNLRKDKA 540
>gi|302660827|ref|XP_003022089.1| hypothetical protein TRV_03830 [Trichophyton verrucosum HKI 0517]
gi|291186016|gb|EFE41471.1| hypothetical protein TRV_03830 [Trichophyton verrucosum HKI 0517]
Length = 1061
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 169/433 (39%), Gaps = 77/433 (17%)
Query: 19 KRGRRKGSKNKLSPGVT--KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL 76
+R R+G + P + EA+ + ++E+A++L+K+ + L+P + + + L
Sbjct: 102 RRVPRRGPLKPVEPTAEFKNLQSEATSAFIDADYERALNLVKQAIHLNPEIFQAHVLLSE 161
Query: 77 AHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA------MYYIRQAIR 130
A G + A AH K +W ++ +++ D+ +A +Y + I
Sbjct: 162 IFLAQGQKRKALYALFTGAHTRRK-PEVWLEVANLILERADSDRAAALDDVVYCYSRVID 220
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+PK +R A+ E+G KA + YE+I + P N +A + A L+++ G+ ++
Sbjct: 221 IDPKRYDIRFERAAINEELGYKGKAIQEYEKILEGLPHNTNALRPLAALYIELGEIGKAR 280
Query: 191 GILEE----YLKVHPSDA-DLSVIDLLVAILMENNAYE---------------------- 223
E Y+ ++P + D + D V I +E +YE
Sbjct: 281 AHYERCISYYMNLNPEEVEDFTWSD--VNIYVELFSYEHHYLAGISSLNSLARWLLGRKD 338
Query: 224 ----------------------KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNME 261
T + + G LPL+L++K G+ L+ G +
Sbjct: 339 DSGWDMVDDDREWDADDYPRRTATPWFVPGQYPLESYGIGLPLELRIKLGVYRLKSGYKD 398
Query: 262 KA--------EILFADLQW---------KNAIDHADLITEVADTLMSLGHSNSALKYYHF 304
+A I W D+ DL E AD++ + AL++Y
Sbjct: 399 EALVSSLTTPSIFEFHFHWLEPDDNSPGAKLFDYGDLFREAADSMKDIQLYEDALRFYIP 458
Query: 305 LETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKE 364
L+ N +L +AECY + + + + NI+AR LA +
Sbjct: 459 LQHVQDFANTSFFLAMAECYDAYGNTEETERCYLTVAEYDKTNIEARTKLAHFYEKMGMT 518
Query: 365 EEAITLLSPPKDL 377
++A+ ++ D+
Sbjct: 519 DQALKFITEAADI 531
>gi|406859984|gb|EKD13045.1| RNA polymerase III transcription factor tfiiic [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 1146
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 164/422 (38%), Gaps = 67/422 (15%)
Query: 10 RKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE 69
R K R RG RK + ++P ++ +L +A+ + N+ A +V+R++ +
Sbjct: 194 RHKPRAPGVHRGPRKAAP--MTPEISMLLSQANDSFQEQNYHTAAMFALDVIRINAETQQ 251
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG--------DTAQA 121
+ TL G V AAHL P + W + + +TA A
Sbjct: 252 AWTTLATIWQEAGEKSHVAKCLVYAAHLQPTVVSSWMSAARYCLYDTGSEKELFLETAIA 311
Query: 122 MYYIRQAIRAEPKD-ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLF 180
Y A RA+ +D R+ A +E+G AA +Y + K P N+D + A++
Sbjct: 312 CY--GAAARADRRDPTEARVGQAEVCIEMGKPGSAAIAYAKALKTSPTNLDILRNLAEVC 369
Query: 181 LKCGQT-------ARSIGILEEYLKVHPSDADL--SVIDLLVAILM-------------- 217
+ Q A++I I LK P DA L S DL I +
Sbjct: 370 VDADQAQLAIDEWAKAIKI----LKAAPDDAPLEFSWEDLSTYITLFEDIRDRKAVIREI 425
Query: 218 -------------------ENNAYEKTLQHIEHAQIVRF-----SGKELPLKLKVKAGIC 253
E N E I F +G +PL+++VK G+
Sbjct: 426 KSVGRWLNGREKESFWDNVEENDCEWDADDSRRKDIPGFVEMAENGTLMPLEIRVKLGMN 485
Query: 254 YLRLGNMEKAEILFA---DLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAG 310
L L + E+A + + L D+ L E AD + +A+ +Y L+T+
Sbjct: 486 RLYLEDYEEAMVHLSCLDPLGGSKIADYHHLFREAADAMFERERHETAMVFYKALKTHGI 545
Query: 311 TDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITL 370
+ + +A C +L + AI + +AL ++D+R+ LA + + +A L
Sbjct: 546 EVDCEMMTAMARCLATLGDDIEAIAHYEEALVLDRTDVDSRMELAKIYERHEQSAKAFAL 605
Query: 371 LS 372
++
Sbjct: 606 VN 607
>gi|390596243|gb|EIN05645.1| TPR-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 1024
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 159/397 (40%), Gaps = 79/397 (19%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS V ++GE + + N E+AI +++EV+R+ P ++ L ++ +G+ K +
Sbjct: 124 LSQQVRALIGEGNQAFVDNNIEEAIRIMQEVIRIEPRASSAWSVLARCYTDIGDDKKSLQ 183
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA--------------------- 128
F ++AAHL D W +L + + G QA+Y R+
Sbjct: 184 FRIMAAHLK-HDPEEWDELAKQSREMGYMQQALYCYRKIYSLDPDNVHALWERASLAKEV 242
Query: 129 -------------IRAEPKDISLRIHLASFYVEIGDYEKAA----ESYEQIQKLFP-DNV 170
+R P D+++ L +E + + A +++E Q L+P +
Sbjct: 243 GDVRAARHSLLALLRRIPHDLTVLDELRPLLIETSELDLCAKLFADAFEHYQSLYPAGSA 302
Query: 171 DATKTGAQL--------------------FLKCGQTA-RSIG---------ILEEYLKVH 200
+TGAQ+ LK Q A R+I L++Y
Sbjct: 303 TDPETGAQVPGGGFGLMDILVLADLYNSSNLKRFQDAVRTIKRGCRWLQGRALQKYWDAR 362
Query: 201 PSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM 260
D++ L NA E + + + V L + + + G+ L++G++
Sbjct: 363 EDDSEYD--------LDPRNAPESVVL-VPRDKTVEPGHYPLDVNARHRLGVARLKMGDL 413
Query: 261 EKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKL 320
++ ++ + + ++ +D+A L E+AD A Y L +AGT + Y+ L+
Sbjct: 414 DEGKMHVSIVLCEDVMDYAPLFGEIADVYFEREMYAEARPIYETLGMDAGTSSMYILLQT 473
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
A C L E A + + + DA+L LA +
Sbjct: 474 AACRRMLGELPEAAEVYEHVISMDPTHNDAKLKLAEI 510
>gi|418066009|ref|ZP_12703377.1| Tetratricopeptide TPR_2 repeat protein [Geobacter metallireducens
RCH3]
gi|373561242|gb|EHP87481.1| Tetratricopeptide TPR_2 repeat protein [Geobacter metallireducens
RCH3]
Length = 643
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 149/382 (39%), Gaps = 65/382 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI +E +RL P P LGLA A G+H A A P D
Sbjct: 78 GRHDEAIKDYREALRLEPAFPRAQGNLGLALLAKGSHDDAVVELTRAISSDP-DPGYHHG 136
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+ + A+Y+ +A + P D + LA+ Y E+G A + Y + L P
Sbjct: 137 LAMIFGQRKIYSLALYHYAEAAKGLPADPVIPTELAALYREMGKVSDAEKQYRKALSLSP 196
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP-------------------------- 201
+ +A A L++ G+T R+I L++ P
Sbjct: 197 SHEEARVGLASLYMAEGRTDRAIEELKQAQIASPGNKEVSSLLAEAYEKKGDRQAADYQS 256
Query: 202 ----------SDADLSVIDLLV-------------AILMENNAYEKTLQHIEHAQIVR-- 236
SD L D L+ A L E + + L + AQ
Sbjct: 257 LLAGKQRGVLSDERLRRGDELMQAKEYAKAAEEFKAALREKPDWPEALMRLAEAQTAAGF 316
Query: 237 -----FSGKELPLKLKVKAGICYLRLGNM--EKAEILFADLQWKNAI----DHADLITEV 285
S KEL ++LK+ G + LG + K I A +++K AI D+ D +
Sbjct: 317 DDEAITSYKEL-IRLKLGTGDTHYNLGVLYERKGLIDEAVVEYKQAIHSSPDNGDARRRL 375
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
AD G A++ Y L G +N L+LKLA L K A+ + AL
Sbjct: 376 ADIYALRGSYPQAIEQYREL-LKKGGNNPVLHLKLARALLGAKNPKEAMASYQDALKIAP 434
Query: 346 DNIDARLTLASLLLEEAKEEEA 367
DN++AR LA+L + + EEA
Sbjct: 435 DNLEARRELAALYRKGNQNEEA 456
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A Q A G ++AI+ KE++RL +T+ LG+ + G A Y A H SP
Sbjct: 308 AEAQTAAGFDDEAITSYKELIRLKLGTGDTHYNLGVLYERKGLIDEAVVEYKQAIHSSPD 367
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ ++L +G QA+ R+ ++ + L + LA + + ++A SY+
Sbjct: 368 NGDARRRLADIYALRGSYPQAIEQYRELLKKGGNNPVLHLKLARALLGAKNPKEAMASYQ 427
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
K+ PDN++A + A L+ K Q + +E L++ DA+ ++L A+ +++
Sbjct: 428 DALKIAPDNLEARRELAALYRKGNQNEEAEKQYKEILRIKKDDAE--ARNILTALYVKSK 485
Query: 221 AYEKTL 226
Y++ +
Sbjct: 486 KYDELI 491
>gi|404498065|ref|YP_006722171.1| TPR domain-containing protein [Geobacter metallireducens GS-15]
gi|78195662|gb|ABB33429.1| TPR domain protein [Geobacter metallireducens GS-15]
Length = 643
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 149/382 (39%), Gaps = 65/382 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI +E +RL P P LGLA A G+H A A P D
Sbjct: 78 GRHDEAIKDYREALRLEPAFPRAQGNLGLALLAKGSHDDAVVELTRAISSDP-DPGYHHG 136
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+ + A+Y+ +A + P D + LA+ Y E+G A + Y + L P
Sbjct: 137 LAMIFGQRKIYSLALYHYAEAAKGLPADPVIPTELAALYREMGKVSDAEKQYRKALSLSP 196
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP-------------------------- 201
+ +A A L++ G+T R+I L++ P
Sbjct: 197 SHEEARVGLASLYMAEGRTDRAIEELKQAQIASPGNKEVSSLLAEAYEKKGDRQAADYQS 256
Query: 202 ----------SDADLSVIDLLV-------------AILMENNAYEKTLQHIEHAQIVR-- 236
SD L D L+ A L E + + L + AQ
Sbjct: 257 LLAGKQRGVLSDERLRRGDELMQAKEYAKAAEEFKAALREKPDWPEALMRLAEAQTAAGF 316
Query: 237 -----FSGKELPLKLKVKAGICYLRLGNM--EKAEILFADLQWKNAI----DHADLITEV 285
S KEL ++LK+ G + LG + K I A +++K AI D+ D +
Sbjct: 317 DDEAITSYKEL-IRLKLGTGDTHYNLGVLYERKGLIDEAVVEYKQAIHSSPDNGDARRRL 375
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
AD G A++ Y L G +N L+LKLA L K A+ + AL
Sbjct: 376 ADIYALRGSYPQAIEQYREL-LKKGDNNPVLHLKLARALLGAKNPKEAMASYQDALKIAP 434
Query: 346 DNIDARLTLASLLLEEAKEEEA 367
DN++AR LA+L + + EEA
Sbjct: 435 DNLEARRELAALYRKGNQNEEA 456
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A Q A G ++AI+ KE++RL +T+ LG+ + G A Y A H SP
Sbjct: 308 AEAQTAAGFDDEAITSYKELIRLKLGTGDTHYNLGVLYERKGLIDEAVVEYKQAIHSSPD 367
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ ++L +G QA+ R+ ++ + L + LA + + ++A SY+
Sbjct: 368 NGDARRRLADIYALRGSYPQAIEQYRELLKKGDNNPVLHLKLARALLGAKNPKEAMASYQ 427
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
K+ PDN++A + A L+ K Q + +E L++ DA+ ++L A+ +++
Sbjct: 428 DALKIAPDNLEARRELAALYRKGNQNEEAEKQYKEILRIKKDDAE--ARNILTALYVKSK 485
Query: 221 AYEKTL 226
Y++ +
Sbjct: 486 KYDELI 491
>gi|428317098|ref|YP_007114980.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
gi|428240778|gb|AFZ06564.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
Length = 732
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 29 KLSPGVTKML---GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
K++P TK L G A L G+ A+ +VVRL+P+ E Y+ GLA+ LG+++
Sbjct: 404 KVNPSHTKALYNRGMARLDI--GDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYR 461
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+A + Y A LSP D+ + GD AM QA++ PK +
Sbjct: 462 TAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRA 521
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ DY+ A E Y + +L PD DA +L ++I E +++ P D
Sbjct: 522 RFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKD 579
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI+ E +RL P YN +A+ L + A + + L+ + +
Sbjct: 562 YDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRG 621
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
GD A+ QAIR P D + + Y E+ +Y A E + +L P+N
Sbjct: 622 LARSASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPNN 681
Query: 170 VDA 172
A
Sbjct: 682 ASA 684
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
G+ + G+ A Y A L+ D+ + + G T QA+ QAI+ P
Sbjct: 349 GVTKAQQGDTTGAIADYTQAIALNASDAESYYKRANARYDTGATEQAIEDYTQAIKVNPS 408
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+ ++IGD A E + Q+ +L P + +A + G +I
Sbjct: 409 HTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYT 468
Query: 195 EYLKVHPSDA 204
+ +++ P+DA
Sbjct: 469 QAIRLSPNDA 478
>gi|113476308|ref|YP_722369.1| glycosyl transferase family protein [Trichodesmium erythraeum
IMS101]
gi|110167356|gb|ABG51896.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
Length = 1486
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 22/331 (6%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+EQAI++ K+V++ + P+ Y +G + A+G + A D+Y A + P ++ +
Sbjct: 294 WEQAIAVSKQVIQ-TKTEPKAYKIIGNSLQAMGKLQEALDWYNKALKIKPDFGEVYANIG 352
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T Q+ QA+ +AI +P+ +LA Y ++ ++AAE Q +L P
Sbjct: 353 TIFAQQKQWGQAIQNYLRAIEIKPEFAGAYRNLAKIYTQVNKSQEAAEYLYQAIRLEPG- 411
Query: 170 VDATKTGAQLFLKCGQTARSIGILEE----YLKVHPSDAD-LSVIDLLVAILMENNAYEK 224
K AQ FL G T G LE+ Y ++ +D + + L L++ E
Sbjct: 412 ----KATAQDFLFTGNTLSENGKLEQAIACYQQLISADPNSFEAYEKLGDSLLKQGQLEL 467
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGN--MEKAEILFADLQWKNAIDH---A 279
+LQ+ ++AQ ++ E +K K G Y R G +K ++ A ++ AI++
Sbjct: 468 SLQNYKNAQKLKPYSTE----IKQKIGEIYYRYGEYFQKKEKVEEAVKAYRQAIENYPQY 523
Query: 280 DL-ITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
D+ ++ + A+K Y + DN + Y L E L++ A+M +
Sbjct: 524 DIPYGKLGEVFSQQEKWEEAVKVYE-KASQIKPDNSWYYNSLGEALKKLEKWEEAVMAYR 582
Query: 339 KALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
KA+ D + LA L++ K EEA+
Sbjct: 583 KAIQLNPDFSWSHNNLADCLVKLGKREEAVV 613
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A+ + ++ ++ P+ YN+LG A L + A Y A L+P S L
Sbjct: 540 WEEAVKVYEKASQIKPDNSWYYNSLGEALKKLEKWEEAVMAYRKAIQLNPDFSWSHNNLA 599
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
V+ G +A+ RQAI+ +P I+L + EIG++++A Y + +L D
Sbjct: 600 DCLVKLGKREEAVVAYRQAIKLKPDFTWSYINLGNTLWEIGNWQEAINPYSRALELKAD 658
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 29 KLSPGVT-KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA---------- 77
KL P T + + + GN+++AI+ + L +LPETY LG A
Sbjct: 620 KLKPDFTWSYINLGNTLWEIGNWQEAINPYSRALELKADLPETYQKLGHALKKRAELDLE 679
Query: 78 ------HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA 131
A+ N Y A + P+D L+ QL V+KG T A+ + + ++
Sbjct: 680 ESIKWYRKAIENDPDNEKLYHKALEVKPEDHTLYLQLGNTLVKKGKTHGAIAFYQLGLQI 739
Query: 132 EPKDISLRIHL 142
P D ++ L
Sbjct: 740 NPDDSEIQGQL 750
>gi|428319148|ref|YP_007117030.1| histidine kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428242828|gb|AFZ08614.1| histidine kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 1018
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 21/262 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE+A + +++ PN P T N A ++ G H+ A +F + + P +
Sbjct: 279 GQFEKAWHFFDKSLQIEPNAPITLNLYATALASNGQHEKALEFLERSIQIEPNAPITLSR 338
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T G +A+ Y ++++ EP A+ G +EKA + +E+ +L P
Sbjct: 339 YATALTSNGQHEKALQYFERSLQLEPNAPITLSRYATALTSNGQHEKALQYFERSLQLEP 398
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N A GQ + + ILE L++ P+D ++L L +EK LQ
Sbjct: 399 NNPITLSRYATALASSGQHEKLVQILERSLQLEPNDP--ITLNLYANALASTGQHEKALQ 456
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLR-------LGNMEKAEILFADLQWKNAIDHAD 280
+ EL L+L+ A I R G EKA + + +L + +
Sbjct: 457 YF-----------ELSLQLEPNAPITLSRYATALASTGQYEKA-LQYFELSLQLEPNAPI 504
Query: 281 LITEVADTLMSLGHSNSALKYY 302
++ A+ L S GH + AL+++
Sbjct: 505 TLSRYANALASNGHPDQALQFF 526
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+ + +L+ ++L PN P T N A ++ G H+ A ++ ++ L P +
Sbjct: 415 GQHEKLVQILERSLQLEPNDPITLNLYANALASTGQHEKALQYFELSLQLEPNAPITLSR 474
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T G +A+ Y +++ EP A+ G ++A + +E+ ++ P
Sbjct: 475 YATALASTGQYEKALQYFELSLQLEPNAPITLSRYANALASNGHPDQALQFFERSIQIEP 534
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL--SVIDLLVAILME 218
++ A GQ +++ E L++ P +A S +D A+++E
Sbjct: 535 NHPRTLSCYAHTLATTGQYEKALQYFELSLQIKPQNARTLSSYLDFQYALVLE 587
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 3/217 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A+ + ++L PN P T + A ++ G H+ + L P D
Sbjct: 381 GQHEKALQYFERSLQLEPNNPITLSRYATALASSGQHEKLVQILERSLQLEPNDPITLNL 440
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ Y +++ EP A+ G YEKA + +E +L P
Sbjct: 441 YANALASTGQHEKALQYFELSLQLEPNAPITLSRYATALASTGQYEKALQYFELSLQLEP 500
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ A G +++ E +++ P+ + L YEK LQ
Sbjct: 501 NAPITLSRYANALASNGHPDQALQFFERSIQIEPNHP--RTLSCYAHTLATTGQYEKALQ 558
Query: 228 HIEHA-QIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ E + QI + + L L + + ++G ++A
Sbjct: 559 YFELSLQIKPQNARTLSSYLDFQYALVLEKVGKHQEA 595
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+ +A +L+ ++ + P+ T T A ++ G + A+ F+ + P D+ +
Sbjct: 178 NYTKAFDILERLLVIEPSNNTTVRTYANALASNGQFEKAWHFFDKSLQNKPDDAVTLSRY 237
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
G +A ++ ++++ +P D A+ G +EKA +++ ++ P+
Sbjct: 238 ANALASNGQFEKAWHFFDKSLQNKPDDAVTLSRYANALASNGQFEKAWHFFDKSLQIEPN 297
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
A GQ +++ LE +++ P +A +++ A L N +EK LQ+
Sbjct: 298 APITLNLYATALASNGQHEKALEFLERSIQIEP-NAPITLSRYATA-LTSNGQHEKALQY 355
Query: 229 IEHA 232
E +
Sbjct: 356 FERS 359
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 108/265 (40%), Gaps = 10/265 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE+A + ++ P+ T + A ++ G + A+ F+ + + P
Sbjct: 245 GQFEKAWHFFDKSLQNKPDDAVTLSRYANALASNGQFEKAWHFFDKSLQIEPNAPITLNL 304
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T G +A+ ++ ++I+ EP A+ G +EKA + +E+ +L P
Sbjct: 305 YATALASNGQHEKALEFLERSIQIEPNAPITLSRYATALTSNGQHEKALQYFERSLQLEP 364
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ A GQ +++ E L++ P++ + L + +EK +Q
Sbjct: 365 NAPITLSRYATALTSNGQHEKALQYFERSLQLEPNNP--ITLSRYATALASSGQHEKLVQ 422
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
+E + + + P+ L + A G EKA + + +L + + ++ A
Sbjct: 423 ILERSLQLEPND---PITLNLYAN-ALASTGQHEKA-LQYFELSLQLEPNAPITLSRYAT 477
Query: 288 TLMSLGHSNSALKYYHF---LETNA 309
L S G AL+Y+ LE NA
Sbjct: 478 ALASTGQYEKALQYFELSLQLEPNA 502
>gi|380489574|emb|CCF36614.1| RNA polymerase III transcription factor tfiiic [Colletotrichum
higginsianum]
Length = 891
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 164/404 (40%), Gaps = 68/404 (16%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ +A +L+ E++R++ + + L G + A VIAAHL PKD A W
Sbjct: 3 GDYARAQNLVFEIIRINAETHQAWTVLASIFREEGLNDKALMAMVIAAHLRPKDFAAWMN 62
Query: 108 LLTFAV------QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ 161
+FA+ Q+G A+ AI+A+P + R+ A G +A +
Sbjct: 63 CASFAMSLAEAGQEGALKTALMCYSSAIKAQPTSLDARLGRAEASHRQGFLSQAITEFSY 122
Query: 162 IQKLFPDNVDATKTGAQLFLKCG---QTARSIGILEEYLKVHPSDADLSV--------ID 210
+ + P ++D + A+ + G +++ + Y H AD +V +
Sbjct: 123 VIERRPLDIDVVRRLAEACVDSGGMEDLQKAVSAYKTYF-AHARTADRNVERELSWHDVG 181
Query: 211 LLVAILMENNAYEKTLQHI---------------------------EHAQIVRFSGKE-- 241
+ V + + + + +H + F E
Sbjct: 182 IYVELFACAGDFTNAIAELKSLSRWLLGRQDDHKWDDCVDDREWDRDHGRRNLFPSFETA 241
Query: 242 --------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD---------LITE 284
L L L+ +A + RL ++ E LQW + + A LI +
Sbjct: 242 AHDLYAYGLGLPLEFRARLALYRL-KIQDEEESNGHLQWLDPTESATATAIENFPYLIRD 300
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
+AD L ++ + AL +Y L +A + L L L +CYL+ + A F A++
Sbjct: 301 IADELFTVQRYSEALDFYELLRQSAYGQDATLLLHLGQCYLTKSDLVAAEDCFLVAIEVD 360
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSN 388
E+NIDAR+ LA + + +EEEA+ L++ L + +D SN
Sbjct: 361 ENNIDARIELARIYEKAKEEEEALILVTEAIALQGI---TDGSN 401
>gi|334116936|ref|ZP_08491028.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
gi|333461756|gb|EGK90361.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
Length = 732
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Query: 29 KLSPGVTKML---GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
K+ P TK L G A L G+ A+ +VVRL+P+ E Y+ GLA+ LG+++
Sbjct: 404 KVHPSHTKALYNRGMARLDI--GDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYR 461
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+A + Y A LSP D+ + GD AM QA++ PK +
Sbjct: 462 TAIEDYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRA 521
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ DY+ A E Y + +L PD DA +L ++I E +++ P D
Sbjct: 522 RFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKD 579
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 39 GEASLQ-----YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
GEA Q Y G++ AI + +RLSPN Y+ GLA SA G+ A +
Sbjct: 444 GEAYSQRGLAYYDLGDYRTAIEDYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQ 503
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A +SPK + ++ D AM +AI +P + S Y+ + Y+
Sbjct: 504 ALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYD 563
Query: 154 KAAESYEQIQKLFPDNVDA--TKTGAQLFLKCGQTAR-----SIGI-------------- 192
KA + +L P + A + A L LK Q A +IG+
Sbjct: 564 KAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLA 623
Query: 193 ----------LEEY---LKVHPSDA 204
+E++ ++++PSDA
Sbjct: 624 RLASGDKQGAVEDFTQAIRLNPSDA 648
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%)
Query: 64 SPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMY 123
SP + + G+A + G+ A Y A L+ D+ + + G T QA+
Sbjct: 338 SPGRAKEWFARGVAKAQQGDTTGAIADYTQAIALNAGDAETYYKRANARYDMGATEQAIQ 397
Query: 124 YIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
QAI+ P + ++IGD A E + Q+ +L P + +A +
Sbjct: 398 DYTQAIKVHPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDL 457
Query: 184 GQTARSIGILEEYLKVHPSDA 204
G +I + +++ P+DA
Sbjct: 458 GDYRTAIEDYTQAIRLSPNDA 478
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
+++AI+ E +RL+P YN +A+ L + A + + L+ + +
Sbjct: 560 ATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASEDCSLTIGLNGNNPKAYSN 619
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAIR P D + + Y E+ +Y A E + +L P
Sbjct: 620 RGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNP 679
Query: 168 DNVDA 172
N A
Sbjct: 680 KNASA 684
>gi|406981036|gb|EKE02561.1| hypothetical protein ACD_20C00362G0010 [uncultured bacterium]
Length = 630
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN E AI +++ ++L +YN LGLA+ LGN + A + A+ L P D++L++
Sbjct: 462 GNMELAIENIEQAIKLDTENAASYNDLGLAYQILGNQEKAISAFKKASFLDP-DNSLYRH 520
Query: 108 LLTFAVQKGDT-AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L A+ +G +++ +R+AIR P + + +LA+ Y +IGDY A +SYE K
Sbjct: 521 NLGIALFEGKRYKESIVELRRAIRLSPYNADIYFNLANIYEKIGDYADAVDSYENFVKHN 580
Query: 167 PD 168
P+
Sbjct: 581 PE 582
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 149/377 (39%), Gaps = 39/377 (10%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
NFE+AI+ K VV P E YN LGLA+ LG + A + A L+P + + L
Sbjct: 225 NFEKAIAEFKYVVTFEPKNIEAYNNLGLAYGFLGWLEEAIQEFKTAIALNPDNPEVRYAL 284
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
K + A ++ AIR +P + L Y + +++A + Y + KL P+
Sbjct: 285 GYIYFMKKNYQYAQIELQTAIRLKPDHELSYLILGQVYAHLDRFKEAIDEYNEALKLNPN 344
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
N A G + ++ ++ ++++P A LS L IL+ N + +
Sbjct: 345 NPTTYYNLAFALNTLGMSEKATECYKKVIELNP--AYLSAYLDLGNILLSNGQQDFAKEC 402
Query: 229 IEHAQIVRFSG-KELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLIT-EVA 286
E A I R S E L G+CY+R +KA F DHA I ++
Sbjct: 403 FE-AAINRSSNFGEAYYSL----GLCYIRSEEYQKALYCF---------DHAIAINPNLS 448
Query: 287 DTLMSLG-----HSNSALKYYHFLET-NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
D G N L + + T+N Y L Y L + AI F KA
Sbjct: 449 DAYYQKGLIYKKDGNMELAIENIEQAIKLDTENAASYNDLGLAYQILGNQEKAISAFKKA 508
Query: 341 LDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKL 400
DN R L L E + +E+I L L +P+ N I L
Sbjct: 509 SFLDPDNSLYRHNLGIALFEGKRYKESIVELRRAIRL----------SPY--NADIYFNL 556
Query: 401 CHIYRAKGMPEDFVDAI 417
+IY G D+ DA+
Sbjct: 557 ANIYEKIG---DYADAV 570
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 142/349 (40%), Gaps = 40/349 (11%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL 81
R + + +P + LG+ ++ + ++++I+L+ E++ P L + Y L L H
Sbjct: 98 ERAAQQVQNTPEILIQLGQMYIENQH--YDKSINLINELLEKYPQLDDCYYLLALNHEKT 155
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
GN A + Y A ++ + + L + +A ++ A+ + + + +
Sbjct: 156 GNIPQAIENYRKAIEINSRSHKSYLALGILYYNQKQLDEANKELQNALSIDFNNTKIHFY 215
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
L Y ++EKA ++ + P N++A + G +I + + ++P
Sbjct: 216 LGLIYNAQENFEKAIAEFKYVVTFEPKNIEAYNNLGLAYGFLGWLEEAIQEFKTAIALNP 275
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNME 261
+ ++ + + +N ++AQI + ++LK + YL LG +
Sbjct: 276 DNPEVRYALGYIYFMKKN---------YQYAQIEL----QTAIRLKPDHELSYLILGQV- 321
Query: 262 KAEILFADL-QWKNAIDHAD-----------LITEVADTLMSLGHSNSALK-YYHFLETN 308
+A L ++K AID + +A L +LG S A + Y +E N
Sbjct: 322 -----YAHLDRFKEAIDEYNEALKLNPNNPTTYYNLAFALNTLGMSEKATECYKKVIELN 376
Query: 309 AGTDNGYL--YLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLA 355
YL YL L LS ++ A F A++R + +A +L
Sbjct: 377 P----AYLSAYLDLGNILLSNGQQDFAKECFEAAINRSSNFGEAYYSLG 421
>gi|299741502|ref|XP_001834504.2| RNA polymerase III transcription factor [Coprinopsis cinerea
okayama7#130]
gi|298404740|gb|EAU87481.2| RNA polymerase III transcription factor [Coprinopsis cinerea
okayama7#130]
Length = 689
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
++GR G LS V ++GEA+ Y N I L+ EV+R+ P ++ L +
Sbjct: 163 QKGRTTGPT--LSHQVKSLIGEANQAYIDSNLPLTIDLMTEVIRIEPRASAAWSVLAQCY 220
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
L + +A V+AAHL D+ W++L + + G QA+Y + + +P+++
Sbjct: 221 DDLSDSHTALKLRVMAAHLR-NDAEEWERLGRKSREMGLVQQALYCFGKMTQVDPENMEY 279
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
A F E+G+ A + I K +P+++ + + ++CG+ +L++ +
Sbjct: 280 LWDRAVFAKEVGEGRVARSCFLGILKRYPNDLVVLREVHPILVECGELGVCAQLLQQAFE 339
Query: 199 VH---PSDAD---------LSVIDLLVAILMEN--NAYEKTLQHI 229
H SD L+++D+L+ + N AYEK + I
Sbjct: 340 FHLRGRSDEGGGGENNPNRLTILDVLLLADLYNALGAYEKAVDVI 384
>gi|218780057|ref|YP_002431375.1| hypothetical protein Dalk_2214 [Desulfatibacillum alkenivorans
AK-01]
gi|218761441|gb|ACL03907.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 777
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G F++A+ ++P+ YN LGL L K A DF+V A L P++ +
Sbjct: 535 GRFKEALQHFTMARDIAPSDSNVYNNLGLMSLKLEESKEARDFFVRAIQLDPRNFEAFNN 594
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + G +A YI+ A+ P+ + ++AS Y + G E A +I ++ P
Sbjct: 595 MGSLLAAAGQDKEAASYIQAALSLAPRSVDALNNMASIYFKTGSIEAGANQLNRILEIEP 654
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N++ + A L LK G + L+ + P D D LL +L+ E+
Sbjct: 655 ENIEVRRNLALLMLKTGNPLGARDQLKTICYISPDDFDAQY--LLATVLISLGRLEEAYT 712
Query: 228 HIEHA 232
H+ A
Sbjct: 713 HLSKA 717
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 74/159 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++ L++ + L T+ +G +G K A + +A ++P DS ++
Sbjct: 501 GRLDEALAELQKGLLLPDYKVRTHCKIGALLVDMGRFKEALQHFTMARDIAPSDSNVYNN 560
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +++ ++ +A + +AI+ +P++ ++ S G ++AA + L P
Sbjct: 561 LGLMSLKLEESKEARDFFVRAIQLDPRNFEAFNNMGSLLAAAGQDKEAASYIQAALSLAP 620
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+VDA A ++ K G L L++ P + ++
Sbjct: 621 RSVDALNNMASIYFKTGSIEAGANQLNRILEIEPENIEV 659
>gi|302809168|ref|XP_002986277.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii]
gi|300145813|gb|EFJ12486.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii]
Length = 668
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 7/214 (3%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
KG+ + + P + L L Y N FE+A+S+ K++ + PN E +G +G
Sbjct: 411 KGAAD-VDPDCVEALYNLGLAYKKLNSFEEALSVFKKISYVLPNNTEVLFQIGQVSDVMG 469
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
N + A + + D+ L L V+ D A+A++Y ++ R P D+ + L
Sbjct: 470 NSRQAIKWLELLVSKVMHDAGLLAMLGNLYVRCEDDAKALHYFSESHRVCPTDVVVTAWL 529
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL-KCGQTARSIGILEEYLKVHP 201
SFY++ YEKA ++ ++ PD V K L L + G ++++ ++ L HP
Sbjct: 530 GSFYLQNELYEKAMPFFQLASRIHPDEVVKWKLKVALCLRRTGSFSKALHKYKQILNAHP 589
Query: 202 SDADL--SVIDLLVAI--LMENNAYEKTLQHIEH 231
+A+ ++ L ++ ME AYE L ++
Sbjct: 590 DNAECLHCLVHLCTSLGRKMEVQAYESKLWKVDQ 623
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 94/227 (41%), Gaps = 39/227 (17%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++ + + + G+ E+A + K + P+ E LGLA+ L + + A + ++
Sbjct: 390 LVNQGNCYFMRGDPERAKQVYKGAADVDPDCVEALYNLGLAYKKLNSFEEALSVFKKISY 449
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
+ P ++ + Q+ G + M RQAI+ +S +H A +G+
Sbjct: 450 VLPNNTEVLFQI-------GQVSDVMGNSRQAIKWLELLVSKVMHDAGLLAMLGN----- 497
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL 216
L+++C A+++ E +V P+D + V L +
Sbjct: 498 ----------------------LYVRCEDDAKALHYFSESHRVCPTD--VVVTAWLGSFY 533
Query: 217 MENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
++N YEK + + A R E+ +K K+K +C R G+ KA
Sbjct: 534 LQNELYEKAMPFFQLAS--RIHPDEV-VKWKLKVALCLRRTGSFSKA 577
>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 466
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL+P L YA G+ ++AI L EV++L+P Y + GL+++ G+ A
Sbjct: 190 KLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKA 249
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ L P DS + T +G +A+ +AI+ KD + YV
Sbjct: 250 VSDFSELIKLKPTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYV 309
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
GD+EKA E++ + +L P + DA + + G+ + I + E L+++P DA+
Sbjct: 310 GKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAE 367
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F I E +RL+P Y+ G + G + A Y A L+PKD+ + +
Sbjct: 75 GDFTSGIHDFDETIRLNPE-GRAYDNRGNLYDQKGEVEKAISDYTEAIKLNPKDAWAYAK 133
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+KGD+ +A+ QAI+ PKD + Y D++KA Y+Q+ KL P
Sbjct: 134 RAADYHKKGDSEKAISDYTQAIQINPKDANYYDSRGRAYAMKRDWDKAIADYDQVVKLNP 193
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
V A + + G ++I L E +K++P DA
Sbjct: 194 KQVSAYNSRGLAYAMKGDMDKAIRDLSEVIKLNPKDA 230
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 9/214 (4%)
Query: 29 KLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL+P G L YA G++++A+S E+++L P Y++ A+ G A
Sbjct: 224 KLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLKPTDSIGYDSRATAYQNQGKLDEA 283
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ A L+ KD+ + V KGD +A+ ++I+ P+D Y
Sbjct: 284 LADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYY 343
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+ G+Y+K + + +L P + ++ A C + G +E ++ +L+
Sbjct: 344 QKGEYQKGIDDINEALRLNPKDAESYNNLAWFRATCPDASMRKG--KEAVEAGKKACELT 401
Query: 208 ------VIDLLVAILMENNAYEKTLQHIEHAQIV 235
I L A E +E+ +++ + A V
Sbjct: 402 NWKEWHCIGTLAAAYAETGDFEQAVKYQKQAMGV 435
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AIS E ++L+P Y + G+ + A Y A ++PKD+ +
Sbjct: 108 GEVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAISDYTQAIQINPKDANYYDS 167
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
K D +A+ Q ++ PK +S Y GD +KA ++ KL P
Sbjct: 168 RGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSEVIKLNP 227
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ A + + G +++ E +K+ P+D+
Sbjct: 228 KDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLKPTDS 264
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 9/192 (4%)
Query: 73 TLGLAHSALGNHKSAFDFYVIAAHLSP-KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA 131
T+G G+++ A + L P D+A + + + + QKGD ++ + IR
Sbjct: 32 TIGKKAQEDGDYELAISCWSSVLKLQPTNDAAFFNRGMAY-TQKGDFTSGIHDFDETIRL 90
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
P+ + + + Y + G+ EKA Y + KL P + A A + K G + ++I
Sbjct: 91 NPEGRAYD-NRGNLYDQKGEVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAIS 149
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAG 251
+ ++++P DA+ D ++K + ++ Q+V+ + K++ G
Sbjct: 150 DYTQAIQINPKDANY--YDSRGRAYAMKRDWDKAI--ADYDQVVKLNPKQVS--AYNSRG 203
Query: 252 ICYLRLGNMEKA 263
+ Y G+M+KA
Sbjct: 204 LAYAMKGDMDKA 215
>gi|426402588|ref|YP_007021559.1| O-linked GlcNAc transferase [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859256|gb|AFY00292.1| putative O-linked GlcNAc transferase [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 348
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 7/223 (3%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRL----SPNLPETYNTLGLAHSALGNHKSAF 88
G + G A+ Y G ++A+ E + + S L ETY +G G+ A
Sbjct: 123 GFESLHGYATSLYKSGRDQEALDKYFEALAVLTDESDTLFETYKNMGNIFVRQGDFDGAE 182
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
++Y A ++P+ L T VQ+GD +++Y R+A+ P++ + LA + +
Sbjct: 183 EYYNKAYTMNPQSDVLLVNFGTLEVQRGDYDKSLYCFRKAVEINPENDKAWVGLAMVHSQ 242
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
GD E A + E + P N A A L+ G+ ++I L+ YL D D+S+
Sbjct: 243 FGDMELAWANIETAIDINPQNRTAVHLAANWGLRDGKLQKAIEALQGYLASVEEDEDMSL 302
Query: 209 IDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL-PLKLKVKA 250
+ L+ +L E+ + IE + KE+ LK K+ A
Sbjct: 303 V--LINLLCSAGQVEQAMLEIERVLLWNPDHKEVRNLKKKITA 343
>gi|393219780|gb|EJD05267.1| TPR-like protein [Fomitiporia mediterranea MF3/22]
Length = 1042
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS V ++GE + Y GN ++ I ++ EV+R+ P ++ L + L + A
Sbjct: 123 LSHQVRALVGEGNAAYVDGNLQETIRIMTEVIRIEPRAASAWSVLATCYRELHETEKALQ 182
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
+I AHL D W QL + + G QA+Y + +AIR +P + AS E+
Sbjct: 183 LSIIGAHLR-HDPEEWHQLARQSQESGQAQQALYCLAKAIRLDPTNYDAIWDRASLAKEL 241
Query: 150 GDYEKAAESYEQIQKLFPDNV 170
G+ A SY I K FP +
Sbjct: 242 GNLPVARISYLAILKRFPHDT 262
>gi|68471858|ref|XP_719972.1| hypothetical protein CaO19.274 [Candida albicans SC5314]
gi|46441819|gb|EAL01113.1| hypothetical protein CaO19.274 [Candida albicans SC5314]
Length = 1057
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 164/396 (41%), Gaps = 63/396 (15%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KR + +L P V L +A+ + + + A L EV++ P Y LG
Sbjct: 173 KRKMMRADNRELDPEVRSNLSQANEAFVRKDLQVAQQLYLEVIKKDPKNFSAYKALGEIS 232
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PKDIS 137
A G +++++AA++ P D+ W Q+ + + G QA+Y +AI + K
Sbjct: 233 KAQGQLNECCNYWLLAANIHPWDTEFWGQVAQLSAELGHIDQAVYCYGRAITPDIAKSCE 292
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+ A Y E Y KA + ++++++L+P + + K A ++ + + +I + + L
Sbjct: 293 FILQRAILYQERKQYGKALDGFQKVRQLYPKDSNIIKYLASVYSEQKRLNDAINLYMKVL 352
Query: 198 --KVHPSDA--------DLSVIDLLVAILMENNAYEKTLQHIEHA--------------- 232
+HP D + +++L+ + ++N+++ L ++ A
Sbjct: 353 DSNIHPERESNELYPKFDWAELNILLELHLQNHSWRMGLNVLKLASRWIQNRSQETWWDE 412
Query: 233 -QIVRFSGKE-----------------------LPLKLKVKAGICYLRLGNMEKAEILFA 268
+ + F ++ LP+ ++ K G C LRLG +++ ++
Sbjct: 413 NEDLEFDSRQRFEVISTLSSQDQIDLAENKPFDLPIDIRFKLG-C-LRLG-LQQKDVAVQ 469
Query: 269 DLQW-KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY-----LYLKLAE 322
+ D +DL E L GH ALK+ + A D + L LA+
Sbjct: 470 HFDYLLEEQDVSDLHFEAGKLLEEHGHYEDALKFL----SKASEDEEFTISLELVQLLAK 525
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
CY + + + + L DN+D +L+LA L
Sbjct: 526 CYFEVGDYHESKQAYETLLQHDPDNLDFKLSLAENL 561
>gi|68471595|ref|XP_720104.1| hypothetical protein CaO19.7906 [Candida albicans SC5314]
gi|46441956|gb|EAL01249.1| hypothetical protein CaO19.7906 [Candida albicans SC5314]
Length = 1059
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 164/396 (41%), Gaps = 63/396 (15%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KR + +L P V L +A+ + + + A L EV++ P Y LG
Sbjct: 175 KRKMMRADNRELDPEVRSNLSQANEAFVRKDLQVAQQLYLEVIKKDPKNFSAYKALGEIS 234
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PKDIS 137
A G +++++AA++ P D+ W Q+ + + G QA+Y +AI + K
Sbjct: 235 KAQGQLNECCNYWLLAANIHPWDTEFWGQVAQLSAELGHIDQAVYCYGRAITPDIAKSCE 294
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+ A Y E Y KA + ++++++L+P + + K A ++ + + +I + + L
Sbjct: 295 FILQRAILYQERKQYGKALDGFQKVRQLYPKDSNIIKYLASVYSEQKRLNDAINLYMKVL 354
Query: 198 --KVHPSDA--------DLSVIDLLVAILMENNAYEKTLQHIEHA--------------- 232
+HP D + +++L+ + ++N+++ L ++ A
Sbjct: 355 DSNIHPERESNELYPKFDWAELNILLELHLQNHSWRMGLNVLKLASRWIQNRSQETWWDE 414
Query: 233 -QIVRFSGKE-----------------------LPLKLKVKAGICYLRLGNMEKAEILFA 268
+ + F ++ LP+ ++ K G C LRLG +++ ++
Sbjct: 415 NEDLEFDSRQRFEVISTLSSQDQIDLAENKPFDLPIDIRFKLG-C-LRLG-LQQKDVAVQ 471
Query: 269 DLQW-KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY-----LYLKLAE 322
+ D +DL E L GH ALK+ + A D + L LA+
Sbjct: 472 HFDYLLEEQDVSDLHFEAGKLLEEHGHYEDALKFL----SKASEDEEFTISLELVQLLAK 527
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
CY + + + + L DN+D +L+LA L
Sbjct: 528 CYFEVGDYHESKQAYETLLQHDPDNLDFKLSLAENL 563
>gi|209875795|ref|XP_002139340.1| TPR repeat-containing protein [Cryptosporidium muris RN66]
gi|209554946|gb|EEA04991.1| TPR repeat-containing protein [Cryptosporidium muris RN66]
Length = 949
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 47/322 (14%)
Query: 22 RRKGSKN-KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH-S 79
R+ GS +SP V K+L +A+ Y F AI +L+EVV+ +P L + ++ LGL +
Sbjct: 92 RKTGSTPVNVSPEVEKLLQKANDAYLAKKFMLAIEILEEVVKKAPGLHDPFHMLGLIYEQ 151
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR--------A 131
L + A +FY +AAHL D LWK++ + + +A+Y ++ +R
Sbjct: 152 ELDDKAKAAEFYFLAAHLVVNDIYLWKRIGQMSCELEMWERAIYCYKRCLRNISNSDNQG 211
Query: 132 EPKDIS-----LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
E + + +R L++ Y++ + + + + + P + K A+ + + G+
Sbjct: 212 ELDEFTQIEDEIRFELSNAYLKTNNIIHCIQQLKILFRRHPGDPLLGKELAKCYHQIGKL 271
Query: 187 ARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQI------------ 234
+ +LE L + DL +I++L + ++ Y+K L +++ I
Sbjct: 272 NMAAEVLESCL---IEETDLHIINMLCEVYIDLKLYQKCLDLVQNMLISKNFENTNNSES 328
Query: 235 ------------VRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLI 282
+R LP+ + VK + L +GN A+ L L+ N
Sbjct: 329 NKCQLSSFEKTDIRHLILTLPIDISVKYAVSGLYIGNSSVADELTTILKESNMEK----- 383
Query: 283 TEVADTLMSLGHSNSALKYYHF 304
EV D SLG + A+K Y+
Sbjct: 384 IEVTDLHQSLGDAYFAVKIYNL 405
>gi|218439517|ref|YP_002377846.1| hypothetical protein PCC7424_2562 [Cyanothece sp. PCC 7424]
gi|218172245|gb|ACK70978.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 364
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ QAI+L ++ L P+ ++ +G +S GN +A Y A L P + A +
Sbjct: 57 GNYSQAITLYQQAATLDQENPKIFSGIGYLYSLQGNFPAAVRAYQQALALEPSNPAFYYA 116
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L GD + A A++ EPK++ I L + DY+KA E Y+ + L P
Sbjct: 117 LGYNLAHTGDYSNAATAYYYAMQLEPKNLKHYIGLGVVLLRQKDYDKAIEVYQWVLALDP 176
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N +A + L+ +T+ +I LE ++ P +L + L ++ + +++ L
Sbjct: 177 NNQEAHEIMGVALLEQKRTSEAISFLENAVEKFPGSTELKL--QLASVSLAQGDFDRGLN 234
Query: 228 HIEHAQIVRFSGKELPLKLKV 248
+E + S ++ +K+ +
Sbjct: 235 LLEQVERRDPSNYKIQMKIAI 255
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++++AI + + V+ L PN E + +G+A A F A P + L QL
Sbjct: 160 DYDKAIEVYQWVLALDPNNQEAHEIMGVALLEQKRTSEAISFLENAVEKFPGSTELKLQL 219
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ ++ +GD + + + Q R +P + +++ +A + YE A +Y + L P
Sbjct: 220 ASVSLAQGDFDRGLNLLEQVERRDPSNYKIQMKIAIILEKKERYEDALTAYRRATYLDPK 279
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+++A ++FL +I + +E ++ P++ D+
Sbjct: 280 SIEANAGIGRVFLAQKDYLGAIVVYKELAELAPNNPDV 317
>gi|76352|pir||Q3YCRQ hypothetical protein (recA 3' region) - Synechococcus sp. (strain
PCC 7002) (fragment)
gi|1196960|gb|AAA88637.1| unknown protein, partial [Synechococcus sp.]
Length = 256
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 30 LSPGVT-------KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
LSP VT +L + + Q NF QA+ ++ + L N + LG A S LG
Sbjct: 32 LSPSVTWANPQLNALLEQGNEQLTNRNFAQAVQHYRQALTLEANNARIHGALGYALSQLG 91
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
N+ A Y A L ++ + L Q GD A+ ++A + +P +++ + L
Sbjct: 92 NYSEAVTAYRRATELEDDNAEFFNALGFNLAQSGDNRSAINAYQRATQLQPNNLAYSLGL 151
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A+ GDY++A +Y ++ +N A + L+ G+ + + + L+ P+
Sbjct: 152 ATVQFRAGDYDQALVAYRKVLAKDSNNTMALQNSLTSLLQLGRNQEAAVLFPDLLRQRPN 211
Query: 203 DADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKV 248
DA+L + + + N ++ + +E A+ R S ++ ++++V
Sbjct: 212 DAELRIKAAVTWFGL--NDRDQAIAFLEEAR--RLSTRDSAMQIRV 253
>gi|238880700|gb|EEQ44338.1| hypothetical protein CAWG_02603 [Candida albicans WO-1]
Length = 1057
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 164/396 (41%), Gaps = 63/396 (15%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KR + +L P V L +A+ + + + A L EV++ P Y LG
Sbjct: 175 KRKMMRADNRELDPEVRSNLSQANEAFVRKDLQVAQQLYLEVIKKDPKNFSAYKALGEIS 234
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PKDIS 137
A G +++++AA++ P D+ W Q+ + + G QA+Y +AI + K
Sbjct: 235 KAQGQLNECCNYWLLAANIHPWDTEFWGQVAQLSAELGHIDQAVYCYGRAITPDIAKSCE 294
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+ A Y E Y KA + ++++++L+P + + K A ++ + + +I + + L
Sbjct: 295 FILQRAILYQERKQYGKALDGFQKVRQLYPKDSNIIKYLASVYSEQKRLNDAINLYMKVL 354
Query: 198 --KVHPSDA--------DLSVIDLLVAILMENNAYEKTLQHIEHA--------------- 232
+HP D + +++L+ + ++N+++ L ++ A
Sbjct: 355 DSNIHPERESNELYPKFDWAELNILLELHLQNHSWRMGLNVLKLASRWIQNRSQETWWDE 414
Query: 233 -QIVRFSGKE-----------------------LPLKLKVKAGICYLRLGNMEKAEILFA 268
+ + F ++ LP+ ++ K G C LRLG +++ ++
Sbjct: 415 NEDLEFDSRQRFEVISTLSSQDQIDLAENKPFDLPIDIRFKLG-C-LRLG-LQQKDVAVQ 471
Query: 269 DLQW-KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY-----LYLKLAE 322
+ D +DL E L GH ALK+ + A D + L LA+
Sbjct: 472 HFDYLLEEQDVSDLHFEAGKLLEEHGHYEDALKFL----SKASEDEEFTISLELVQLLAK 527
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
CY + + + + L DN+D +L+LA L
Sbjct: 528 CYFEVGDYHESKQAYETLLQHDPDNLDFKLSLAENL 563
>gi|156386824|ref|XP_001634111.1| predicted protein [Nematostella vectensis]
gi|156221190|gb|EDO42048.1| predicted protein [Nematostella vectensis]
Length = 1528
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 161/373 (43%), Gaps = 48/373 (12%)
Query: 43 LQYAYGNFEQAISLLKEVVRL------SPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+Q + GN+E+A+ ++ +++ +G+ +LGN++ A +Y A
Sbjct: 381 VQQSLGNYEEAMKYYQQALQVYISTGNESKQARVRQKIGVVQQSLGNYEEAMKYYQQALQ 440
Query: 97 LSPKDSALWKQLLT----FAVQK--GDTAQAMYYIRQAIRA------EPKDISLRIHLAS 144
+ + Q VQ+ G+ +AM Y +QA++ E K +R ++
Sbjct: 441 VFERTGNESGQADVRHNIGVVQQCLGNYEEAMKYYQQALQVFISTGNESKQADVRQNIGG 500
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP--- 201
+G+YE+A + Y+Q ++F + + A + G +S+G EE +K +
Sbjct: 501 VQQRLGNYEEAMKYYQQALQVFERTGNESDQ-AGVRHNIGVVQQSLGNYEEAMKYYQQAL 559
Query: 202 -------SDADLSVIDLLVAILMEN-NAYEKTLQHIEHA-QIVRFSGKE-LPLKLKVKAG 251
++++ + + L + ++ E+ YE+ +++ + A Q+ +G E +++ K G
Sbjct: 560 QVYISTGNESNQAGVRLKIGVVQESLGNYEEAMKYYQQALQVYISTGNESTQARVRQKIG 619
Query: 252 ICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH--- 303
+ LGN E+A + L + N D AD+ + SLG+ A+KYY
Sbjct: 620 VVQQSLGNYEEAMKYYQQALQVFERTGNESDQADVRQNIGVVQHSLGNYEEAMKYYQQAL 679
Query: 304 --FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE------DNIDARLTLA 355
++ T +D + + L A+ ++ +AL FE D D R +
Sbjct: 680 QVYISTGNESDQADVRQNIGGVQQRLGNYEEAMKYYQQALQVFERTGNESDQADVRQNIG 739
Query: 356 SLLLEEAKEEEAI 368
++ EEA+
Sbjct: 740 AVQDSLGNYEEAM 752
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 154/362 (42%), Gaps = 48/362 (13%)
Query: 43 LQYAYGNFEQAISLLKEVVRL------SPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+Q GN+E+A+ ++ +++ + +G LGN++ A +Y A
Sbjct: 461 VQQCLGNYEEAMKYYQQALQVFISTGNESKQADVRQNIGGVQQRLGNYEEAMKYYQQALQ 520
Query: 97 L-----SPKDSALWKQLLTFAVQK-GDTAQAMYYIRQAIRA------EPKDISLRIHLAS 144
+ + D A + + Q G+ +AM Y +QA++ E +R+ +
Sbjct: 521 VFERTGNESDQAGVRHNIGVVQQSLGNYEEAMKYYQQALQVYISTGNESNQAGVRLKIGV 580
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP--- 201
+G+YE+A + Y+Q +++ + + T A++ K G +S+G EE +K +
Sbjct: 581 VQESLGNYEEAMKYYQQALQVYISTGNES-TQARVRQKIGVVQQSLGNYEEAMKYYQQAL 639
Query: 202 -------SDADLSVIDLLVAILMEN-NAYEKTLQHIEHA-QIVRFSGKEL-PLKLKVKAG 251
+++D + + + ++ + YE+ +++ + A Q+ +G E ++ G
Sbjct: 640 QVFERTGNESDQADVRQNIGVVQHSLGNYEEAMKYYQQALQVYISTGNESDQADVRQNIG 699
Query: 252 ICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH--- 303
RLGN E+A + L + N D AD+ + SLG+ A+KYY
Sbjct: 700 GVQQRLGNYEEAMKYYQQALQVFERTGNESDQADVRQNIGAVQDSLGNYEEAMKYYQQAL 759
Query: 304 --FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE------DNIDARLTLA 355
++ T +D + + L A+ ++ +AL +E D D R +
Sbjct: 760 QVYISTGNESDQADVRQNIGGVQQRLGNYEEAMKYYQQALQVYERTGNESDQADVRQNIG 819
Query: 356 SL 357
++
Sbjct: 820 AV 821
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 142/345 (41%), Gaps = 42/345 (12%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRL------SPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
+Q GN+E+A+ ++ +++ + + +G +LGN++ A +Y A
Sbjct: 59 GGVQQRLGNYEEAMKYYQQALQVYISTGNESDQADVRQNIGGVQQSLGNYEEAMKYYQQA 118
Query: 95 AHL-----SPKDSALWKQLLTFAVQK-GDTAQAMYYIRQAIRA------EPKDISLRIHL 142
+ + + A +Q + + G+ +AM Y +QA++ E K +R ++
Sbjct: 119 LQVFERTGNESEQAGVRQNIGVVQESLGNYEEAMKYYQQALQVFISTGNESKQADVRQNI 178
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE------- 195
+G+YE+A + Y+Q+ ++F N + + A + L G + +G EE
Sbjct: 179 GGVQRRLGNYEEAMKYYQQVLQVFERNGNESDQ-AGVLLNIGVVQQCLGNYEEAMKYYQQ 237
Query: 196 ----YLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA-QIVRFSGKELP-LKLKVK 249
Y+ SV + + YE+ +++ + A Q+ +G E +++
Sbjct: 238 ALQVYISTGNESKQASVRQNIGGVQESLGNYEEAMKYYQQALQVFISTGNESEQADVRLN 297
Query: 250 AGICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH- 303
G LGN E+A + L + N AD+ + LG+ A+KYY
Sbjct: 298 IGGVQQSLGNYEEAMKYYQQALQVFISTGNESKQADVRQNIGVVQRRLGNYEEAMKYYQQ 357
Query: 304 ----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
F T +D + L + SL A+ ++ +AL +
Sbjct: 358 ALQVFERTGNESDQADVRLNIGVVQQSLGNYEEAMKYYQQALQVY 402
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 152/347 (43%), Gaps = 46/347 (13%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRL---SPNLPETYNT---LGLAHSALGNHKSAFDFY--- 91
+Q + GN+E+A+ ++ +++ + N E + +G +LGN++ A +Y
Sbjct: 259 GGVQESLGNYEEAMKYYQQALQVFISTGNESEQADVRLNIGGVQQSLGNYEEAMKYYQQA 318
Query: 92 ---VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA------EPKDISLRIHL 142
I+ K + + + + + G+ +AM Y +QA++ E +R+++
Sbjct: 319 LQVFISTGNESKQADVRQNIGVVQRRLGNYEEAMKYYQQALQVFERTGNESDQADVRLNI 378
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH-- 200
+G+YE+A + Y+Q +++ + +K A++ K G +S+G EE +K +
Sbjct: 379 GVVQQSLGNYEEAMKYYQQALQVYISTGNESKQ-ARVRQKIGVVQQSLGNYEEAMKYYQQ 437
Query: 201 -----------PSDADLSVIDLLVAILMENNAYEKTLQHIEHA-QIVRFSGKEL-PLKLK 247
AD+ +V + N YE+ +++ + A Q+ +G E ++
Sbjct: 438 ALQVFERTGNESGQADVRHNIGVVQQCLGN--YEEAMKYYQQALQVFISTGNESKQADVR 495
Query: 248 VKAGICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY 302
G RLGN E+A + L + N D A + + SLG+ A+KYY
Sbjct: 496 QNIGGVQQRLGNYEEAMKYYQQALQVFERTGNESDQAGVRHNIGVVQQSLGNYEEAMKYY 555
Query: 303 H-----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
++ T ++ + LK+ SL A+ ++ +AL +
Sbjct: 556 QQALQVYISTGNESNQAGVRLKIGVVQESLGNYEEAMKYYQQALQVY 602
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 148/354 (41%), Gaps = 44/354 (12%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNT------LGLAHSALGNHKS 86
GV +G +Q + GN+E+A+ ++ +++ + N +G+ +LGN++
Sbjct: 533 GVRHNIG--VVQQSLGNYEEAMKYYQQALQVYISTGNESNQAGVRLKIGVVQESLGNYEE 590
Query: 87 AFDFYVIAAHL-----SPKDSALWKQLLTFAVQK-GDTAQAMYYIRQAIRA------EPK 134
A +Y A + + A +Q + Q G+ +AM Y +QA++ E
Sbjct: 591 AMKYYQQALQVYISTGNESTQARVRQKIGVVQQSLGNYEEAMKYYQQALQVFERTGNESD 650
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+R ++ +G+YE+A + Y+Q +++ + + A + G + +G E
Sbjct: 651 QADVRQNIGVVQHSLGNYEEAMKYYQQALQVYISTGNESDQ-ADVRQNIGGVQQRLGNYE 709
Query: 195 EYLKVHP----------SDADLSVIDLLVAILMEN-NAYEKTLQHIEHA-QIVRFSGKEL 242
E +K + +++D + + + + ++ YE+ +++ + A Q+ +G E
Sbjct: 710 EAMKYYQQALQVFERTGNESDQADVRQNIGAVQDSLGNYEEAMKYYQQALQVYISTGNES 769
Query: 243 -PLKLKVKAGICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSN 296
++ G RLGN E+A + L + N D AD+ + LG+
Sbjct: 770 DQADVRQNIGGVQQRLGNYEEAMKYYQQALQVYERTGNESDQADVRQNIGAVQKCLGNYE 829
Query: 297 SALKYYH-----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
A+KYY ++ T + Y + Y A F K+ + FE
Sbjct: 830 EAMKYYQQALQVYISTGNESHQAKTYSNIGLLYREKNNYLDAESHFTKSFEIFE 883
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 115/274 (41%), Gaps = 32/274 (11%)
Query: 124 YIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
YI ++ D+ R ++ +G+YE+A + Y+Q +++ + + A +
Sbjct: 42 YISTGNESDQADV--RQNIGGVQQRLGNYEEAMKYYQQALQVYISTGNESDQ-ADVRQNI 98
Query: 184 GQTARSIGILEEYLKVHP----------SDADLSVIDLLVAILMEN-NAYEKTLQHIEHA 232
G +S+G EE +K + ++++ + + + ++ E+ YE+ +++ + A
Sbjct: 99 GGVQQSLGNYEEAMKYYQQALQVFERTGNESEQAGVRQNIGVVQESLGNYEEAMKYYQQA 158
Query: 233 -QIVRFSGKEL-PLKLKVKAGICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEV 285
Q+ +G E ++ G RLGN E+A ++L + N D A ++ +
Sbjct: 159 LQVFISTGNESKQADVRQNIGGVQRRLGNYEEAMKYYQQVLQVFERNGNESDQAGVLLNI 218
Query: 286 ADTLMSLGHSNSALKYYH-----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
LG+ A+KYY ++ T + + + SL A+ ++ +A
Sbjct: 219 GVVQQCLGNYEEAMKYYQQALQVYISTGNESKQASVRQNIGGVQESLGNYEEAMKYYQQA 278
Query: 341 LDRF------EDNIDARLTLASLLLEEAKEEEAI 368
L F + D RL + + EEA+
Sbjct: 279 LQVFISTGNESEQADVRLNIGGVQQSLGNYEEAM 312
>gi|357131539|ref|XP_003567394.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 980
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 41 ASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
A+L AY GN +A+ + + L+P L + Y LG A G + A++ YV A +
Sbjct: 162 ANLANAYTRKGNLSKAVGCYHQAIALNPRLVDAYCNLGDVLKAQGLYSDAYNCYVNALSV 221
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P + W + +Q GD ++A+ Y ++AI+ +P ++L + Y +G ++ A
Sbjct: 222 EPSSANAWYYIAGLFMQWGDPSKAVLYYKEAIKYKPSFYDAHLNLGNLYKAVGMHQDAIV 281
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
Y+ + PDN A T A + + GQ
Sbjct: 282 CYQNAVRASPDNDIAYGTLANTYYEQGQ 309
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y F+ I E V++ PN PE N + A G+ A Y A L P
Sbjct: 97 GAVYYQLREFDMCIVRNSEAVQIQPNFPECVNNMANAWREKGDIDCAIQLYDHATKLRPT 156
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L +KG+ ++A+ QAI P+ + +L G Y A Y
Sbjct: 157 FADAWANLANAYTRKGNLSKAVGCYHQAIALNPRLVDAYCNLGDVLKAQGLYSDAYNCYV 216
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILME 218
+ P + +A A LF++ G ++++ +E +K PS DA L++ +L A+ M
Sbjct: 217 NALSVEPSSANAWYYIAGLFMQWGDPSKAVLYYKEAIKYKPSFYDAHLNLGNLYKAVGMH 276
Query: 219 NNA 221
+A
Sbjct: 277 QDA 279
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L +G+ +A+ KE ++ P+ + + LG + A+G H+ A Y A SP
Sbjct: 233 AGLFMQWGDPSKAVLYYKEAIKYKPSFYDAHLNLGNLYKAVGMHQDAIVCYQNAVRASPD 292
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + L ++G A+ RQAI + +L + + G ++A YE
Sbjct: 293 NDIAYGTLANTYYEQGQLDLAIRSYRQAINCNSSYVEAYNNLGNALKDAGKSDEAIGCYE 352
Query: 161 QIQKLFPDNVDATKTGAQLFLK 182
+ L P + A ++++
Sbjct: 353 KCLALQPSHPQALTNLGNVYME 374
>gi|66357798|ref|XP_626077.1| tfc4p like TFIIIC subunit; TPR repeat containing basal
transcription factor [Cryptosporidium parvum Iowa II]
gi|46227166|gb|EAK88116.1| tfc4p like TFIIIC subunit; TPR repeat containing basal
transcription factor [Cryptosporidium parvum Iowa II]
Length = 933
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 145/331 (43%), Gaps = 58/331 (17%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSP 65
Y RK+ R L+ ++ + S+ +S + K+L A+ Y F AI +L+E+V +P
Sbjct: 75 YSNERKRRRDLSHRK--KTKSQQNVSTEIEKLLQRANDAYLEKKFILAIEILEEIVVKAP 132
Query: 66 NLPETYNTLGLAH-SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYY 124
L + ++ LGL + L + + A FY++AAHL D LW+++ + + D +A+Y
Sbjct: 133 GLHDPFHMLGLIYEQELDDKEKAIGFYLVAAHLVSTDFFLWRRIGQMSAEIQDWNRAIYC 192
Query: 125 IRQAIR--------------AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF---P 167
+ I+ A+ +D +R L+S Y + D + +Q++ LF P
Sbjct: 193 YSKCIKNIEYSENLGGQESAAQLED-EIRFELSSAYYSVNDINRCI---QQLKILFWRHP 248
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME--------- 218
+ K A+ + K G+ + + ILE ++ D++++++L + ++
Sbjct: 249 GDPLLGKELARCYHKIGKLSLAAEILESCIEYCD---DINIVNMLCEVYIDLKLYQKCVD 305
Query: 219 ----------------NNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEK 262
N+ + + QH + I K +P+ + K + L GN
Sbjct: 306 LIHNYFGKMNTQSNDFNSIFNQLTQHNTNEIIDNQFLKNVPIDIATKYAVANLNFGNYIP 365
Query: 263 AEILFADLQWKNAIDHADLITEVADTLMSLG 293
A LQ I+ + + + D ++LG
Sbjct: 366 A------LQVSKIINEYNSLEDFIDLHLTLG 390
>gi|170077053|ref|YP_001733691.1| hypothetical protein SYNPCC7002_A0425 [Synechococcus sp. PCC 7002]
gi|190358880|sp|P19737.2|Y425_SYNP2 RecName: Full=TPR repeat-containing protein SYNPCC7002_A0425
gi|169884722|gb|ACA98435.1| conserved hypothetical protein, TPR domain [Synechococcus sp. PCC
7002]
Length = 387
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 30 LSPGVT-------KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
LSP VT +L + + Q NF QA+ ++ + L N + LG A S LG
Sbjct: 52 LSPSVTWANPQLNALLEQGNEQLTNRNFAQAVQHYRQALTLEANNARIHGALGYALSQLG 111
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
N+ A Y A L ++ + L Q GD A+ ++A + +P +++ + L
Sbjct: 112 NYSEAVTAYRRATELEDDNAEFFNALGFNLAQSGDNRSAINAYQRATQLQPNNLAYSLGL 171
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A+ GDY++A +Y ++ +N A + L+ G+ + + + L+ P+
Sbjct: 172 ATVQFRAGDYDQALVAYRKVLAKDSNNTMALQNSLTSLLQLGRNQEAAVLFPDLLRQRPN 231
Query: 203 DADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKV 248
DA+L + + + N ++ + +E A+ R S ++ ++++V
Sbjct: 232 DAELRIKAAVTWFGL--NDRDQAIAFLEEAR--RLSTRDSAMQIRV 273
>gi|170109093|ref|XP_001885754.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639334|gb|EDR03606.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 169
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS V ++G+ + Y N +AI +++EV+R+ P ++ L + + + A
Sbjct: 2 LSQQVRSLIGDGNQAYVDSNLPEAIRMMQEVIRIEPRAASAWSVLAQCYEDMEQGQKALQ 61
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
++AAHL D+ W +L + + G QA+Y R+ +P ++ AS EI
Sbjct: 62 LRIMAAHLR-HDADEWDRLARQSREHGYNQQALYCYRKVYSLDPTNVDALWDRASLAKEI 120
Query: 150 GDYEKAAESYEQIQKLFPDNV 170
GD+ A ++ I K FP ++
Sbjct: 121 GDFRTARNAFTSILKRFPHDL 141
>gi|222619750|gb|EEE55882.1| hypothetical protein OsJ_04532 [Oryza sativa Japonica Group]
Length = 885
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 37/277 (13%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y F+ I+ +E V + PN PE +N++ A G+ +A FYV A L P
Sbjct: 77 GAVYYQLREFDMCIAKNEEAVAIQPNCPECFNSIANAWREKGDVDNAIQFYVHAVQLRPT 136
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD-------YE 153
+ W L +KG+ +QA QA+ P HLA Y +GD Y
Sbjct: 137 FADAWTNLANAYTRKGNLSQAAECCHQALALNP-------HLADAYCNLGDVLKAQGLYR 189
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDL 211
+A Y + P +A A L ++ G ++ +E +K +P+ DA L++ +L
Sbjct: 190 EAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAALYYKEAIKCNPAFYDAHLNLGNL 249
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EKAEILFAD 269
M +A IV F + K + + Y LGN E+ ++ A
Sbjct: 250 YKVTGMRQDA------------IVCFQNAA---RAKPENAVAYGNLGNAYHEQGQLDLAI 294
Query: 270 LQWKNAI----DHADLITEVADTLMSLGHSNSALKYY 302
L ++ AI + + + + L G + A+ Y
Sbjct: 295 LSYRQAIHCNSSYVEAYNNLGNALKDAGRNEEAISCY 331
>gi|403417449|emb|CCM04149.1| predicted protein [Fibroporia radiculosa]
Length = 1009
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 136/344 (39%), Gaps = 51/344 (14%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS V ++GE + Y N +AI +++EV+R+ P ++ L ++ L +
Sbjct: 137 LSQQVRALIGEGNQAYVDNNLPEAIRVMEEVIRIEPRAASAWSVLAQCYADLAESQKTLL 196
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
V+AAHL+ D+ W QL + + G QA+Y R+A +P +++ AS EI
Sbjct: 197 LRVMAAHLN-HDAEEWDQLARQSRELGYNQQALYCYRKAFNLDPTNVNALWDRASLAKEI 255
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL----KVHPS--- 202
GD + A + + K P N+ + ++ + E + PS
Sbjct: 256 GDLKTARSTLVAMLKRVPHNLTVLDELRPVLIELSDLTLCATLFSEAFAHNHSIFPSGIG 315
Query: 203 ----------DADLSVIDLLVAILMEN--NAYEKTLQHIE-------------------- 230
++ LLV + N YEK + I
Sbjct: 316 YNPESQQEVPGGGFGLMHLLVLADLYNTLGKYEKAIDTIRKGCRWLQGRAQQVFWDVCED 375
Query: 231 ----HAQIVRFSGKEL-----PLKLKV--KAGICYLRLGNMEKAEILFADLQWKNAIDHA 279
A+ R + EL PL + + + +++G+ E+ +I + ++A ++A
Sbjct: 376 DREYDAEGFRCADDELQPGIYPLDVNARHRLAVARIKMGDAEEGKIHAKIVLSQDAAEYA 435
Query: 280 DLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAEC 323
L E+AD A Y L +AGT + Y+ ++ A C
Sbjct: 436 PLFGEIADAYFDRELYVEAGHIYEILGGDAGTSSLYVLMQAAAC 479
>gi|88706362|ref|ZP_01104067.1| TPR domain protein [Congregibacter litoralis KT71]
gi|88699298|gb|EAQ96412.1| TPR domain protein [Congregibacter litoralis KT71]
Length = 576
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 31 SPGVTK-MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
SPG + ML A+ G F +A L++ + +PN PE + L H + + A
Sbjct: 35 SPGQPQAMLAYATFLRNQGRFAEAQDQLQQALAGAPNSPEVWQALARLHYQQESWQEAQR 94
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
A L+P+ LW+ A ++GD AQA+ RQ I PK L LA +
Sbjct: 95 CITKATELAPQAPPLWELAAAIAQKQGDVAQALALCRQGIGHNPKASRLHYSLAQLLRQE 154
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCG 184
D+ +AA +YEQ KL D D + A+ L G
Sbjct: 155 CDFVEAAAAYEQALKLGFDQPDLYRNRAEALLDAG 189
>gi|281200884|gb|EFA75098.1| transcription factor IIIC-gamma subunit [Polysphondylium pallidum
PN500]
Length = 446
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 164/410 (40%), Gaps = 54/410 (13%)
Query: 277 DHADLITEVADTLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAECYLSLKERAHAIM 335
D D+ ++ L+ L H AL + L + +++LKL Y +L AI
Sbjct: 16 DIPDIYYKLGSRLIELDHHEKALPLFLELLNKAENLEYEFIWLKLGTIYKALNNYQLAIK 75
Query: 336 FFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEK 395
+ +D N +A L L+ + E E+++ LL+ +D +N +EK
Sbjct: 76 YLQDFIDAEPTNKEACLLLSDIYKETGDHEKSLQLLT----------QADNNNTSEDSEK 125
Query: 396 IIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYNNL 455
G E ++ + ES ++A +Q +K ++ + NL
Sbjct: 126 ------------GKFESTLNDL-----ESKRLKATQQDIKELFKVADDFM--------NL 160
Query: 456 PTDSILCGIRPAAPKSELLVAARARKKIQKKEALKEEKKALAKAAGVEWHSDDTDDESQQ 515
GI A LL + +++KK L + ++ + S Q
Sbjct: 161 SKYPQFLGISRA-----LLNGSGDNVRLKKKTVLGGALTMRSVPRRIDRYIRHVSHRSNQ 215
Query: 516 EAFREPPLPNLLKNEENQCLIIDLCKALASLQRYEEASEIINLSMRLAYNILPLEK--KE 573
P L ++ L+ + CK L RY+EAS + ++R NI + +
Sbjct: 216 ------PFAERLDEKDYFFLVTNTCKVLLLFHRYDEASTFLRYALR---NIRFVTQAYSH 266
Query: 574 ELRSLGAKMAYDSTDPNHGFDCAKYILQLHPYSLSAWNCYYKVLSRMGKINSKHSKHSKF 633
+L L +A++ + P F KY+ P+S WN + KV+ M K H F
Sbjct: 267 QLNFLLVGIAFNVSRPLLAFSHFKYVCTKKPFSNRIWNLFNKVV-LMSK-GDYFFTHKDF 324
Query: 634 IRYLRAKYKDCVPPIIISGHQFTMASHHQDAARCYLEAYKLLPENPLINL 683
IR L + +P II+G+ + + A YL A+K PE+PL+NL
Sbjct: 325 IRKLLNENPTSLPMRIITGNSQKTTGNAKSALLEYLRAFKCQPEDPLVNL 374
>gi|58260102|ref|XP_567461.1| RNA polymerase III transcription factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|57229511|gb|AAW45944.1| RNA polymerase III transcription factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 971
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 4/158 (2%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
+++ K +K+ RR +K S V +LG+A+ Y ++++AIS EV+RL P +P
Sbjct: 97 RRSGKAPQKQPRRA---HKPSHEVNYLLGQANGAYLVEDYDKAISSFLEVIRLDPYVPAA 153
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
+ TL + LG+ + A + AH+ + LW++L + G Q++Y IR+A++
Sbjct: 154 WVTLSSCYKELGDEEKARQMRFLGAHVD-DEGDLWRELAQEFREIGHLEQSVYCIRKALK 212
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
EP I L L + Y G + + + ++ P+
Sbjct: 213 CEPDQIDLLWDLGAIYRIQGQKTRGCNVFRAMLQIEPE 250
>gi|342320629|gb|EGU12568.1| Hypothetical Protein RTG_01101 [Rhodotorula glutinis ATCC 204091]
Length = 1100
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
GRR + SP V ++LG+A+ YA G ++AI LL EVVR+ P + ++ TL +
Sbjct: 198 GRRAAGDIEPSPEVKRLLGQANAAYAEGRLQEAIELLSEVVRIDPIIRVSWYTLATIYEE 257
Query: 81 LGNHKSAFDFYVIAAHLSPKD--SALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
LG + A ++A HL K S+ W L G QA+Y QAI+ + D+
Sbjct: 258 LGEREKAVQCKIVATHLLGKKEASSEWGDLGRECRDVGLLHQAIYCFTQAIKVDKDDVDA 317
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
A+ G A +++ + L P + + A + Q A++ IL
Sbjct: 318 MWDRATLLKLSGATNMAIKAFFALLTLLPHDPGVLRELAPMLAATHQFAKASSIL 372
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 60/131 (45%)
Query: 241 ELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALK 300
EL ++L+ + G+ L +G +E+A F + ++ +L + + N A+
Sbjct: 471 ELDVRLRSRLGLARLGMGWVEEAARHFDIVLAEDVAQFPELFGAIGEAYYERKMYNEAID 530
Query: 301 YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
Y + N T+ ++LK+ +C ++ + A F ++ N +A+L LA L +
Sbjct: 531 VYMLMAENEETNGPAVWLKVGQCRQAMGDFEEARDCFENIVEEEPGNAEAKLALAKCLEQ 590
Query: 361 EAKEEEAITLL 371
A+TL+
Sbjct: 591 LGDPSRALTLI 601
>gi|303279024|ref|XP_003058805.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459965|gb|EEH57260.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 669
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F AI L+ + P LG H+A+G+ A +Y + L P D + +
Sbjct: 491 GDFPAAIKHLEILHAKVSTDPGILARLGAIHAAIGDEAKALHYYQESHRLYPSDMDVLRW 550
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L TF V+ G+ +A + A +PKD+ R+ +A+ ++G+ A +YE I K++P
Sbjct: 551 LGTFYVKTGNWEKARELYQLACMIKPKDVKYRLLVATCLRKVGNVNDALAAYETIHKVYP 610
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
DNV+ + +L+ G+T + KV D D V
Sbjct: 611 DNVECLRHLCRLYGDLGRTKDVDECQVKLRKVEAEDGDGGV 651
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 19 KRGRRKGSKNKL--SPGVTKMLGEA--SLQYAY---GNFEQAISLLKEVVRLSPNLPETY 71
+RG +G+++ + GV EA +L AY G +E A++ ++V ++P+ E
Sbjct: 421 QRGDLEGARDLFLEAVGVQADCHEAIYNLGLAYIKLGAYEDALAAFRKVHAMTPDNAEVL 480
Query: 72 NTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA 131
LG LG+ +A I D + +L GD A+A++Y +++ R
Sbjct: 481 YQLGNVSDMLGDFPAAIKHLEILHAKVSTDPGILARLGAIHAAIGDEAKALHYYQESHRL 540
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
P D+ + L +FYV+ G++EKA E Y+ + P +V A K G ++
Sbjct: 541 YPSDMDVLRWLGTFYVKTGNWEKARELYQLACMIKPKDVKYRLLVATCLRKVGNVNDALA 600
Query: 192 ILEEYLKVHPSDAD 205
E KV+P + +
Sbjct: 601 AYETIHKVYPDNVE 614
>gi|302814181|ref|XP_002988775.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii]
gi|300143596|gb|EFJ10286.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii]
Length = 668
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 7/214 (3%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
KG+ + + P + L L Y N FE+A+S+ K++ + PN E +G +G
Sbjct: 411 KGAAD-VDPDCVEALYNLGLAYKKLNSFEEALSVFKKISYVLPNNTEVLFQIGQVSDVMG 469
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
N + A + + D+ L L V+ D A+A++Y ++ R P D+ + L
Sbjct: 470 NSRQAIKWLELLVSKVMHDAGLLAMLGNLYVRCEDDAKALHYFSESHRVCPTDVVVTAWL 529
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL-KCGQTARSIGILEEYLKVHP 201
SFY++ YEKA ++ ++ P+ V K L L + G ++++ ++ L HP
Sbjct: 530 GSFYLQNELYEKAMPFFQLASRIHPEEVVKWKLKVALCLRRTGSFSKALHKYKQILSAHP 589
Query: 202 SDADL--SVIDLLVAI--LMENNAYEKTLQHIEH 231
+A+ ++ L ++ ME AYE L ++
Sbjct: 590 DNAECLRCLVHLCTSLGRKMEVQAYESKLWKVDQ 623
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 39/227 (17%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++ + + + G+ E+A + K + P+ E LGLA+ L + + A + ++
Sbjct: 390 LVNQGNCYFMRGDPERAKQVYKGAADVDPDCVEALYNLGLAYKKLNSFEEALSVFKKISY 449
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
+ P ++ + Q+ G + M RQAI+ +S +H A +G+
Sbjct: 450 VLPNNTEVLFQI-------GQVSDVMGNSRQAIKWLELLVSKVMHDAGLLAMLGN----- 497
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL 216
L+++C A+++ E +V P+D + V L +
Sbjct: 498 ----------------------LYVRCEDDAKALHYFSESHRVCPTD--VVVTAWLGSFY 533
Query: 217 MENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
++N YEK + + A + E +K K+K +C R G+ KA
Sbjct: 534 LQNELYEKAMPFFQLASRIH---PEEVVKWKLKVALCLRRTGSFSKA 577
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 12/276 (4%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y+ +E+A+ KE +RL+P L +N G+ LG A + + A L P
Sbjct: 381 YSLERYEEALEAFKEGLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKLRPDFEDA 440
Query: 105 WKQ--LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
WK LL FA ++ + A+ + + ++ P+DI + +++G E A E E++
Sbjct: 441 WKNRGLLLFASEECEKAEEAF--AEVLKINPEDIDSLYNRGISLLKLGRKETALEYLEKV 498
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAY 222
L PD D + + + G+ +++ E+ +P D ++ +A ME Y
Sbjct: 499 VSLRPDYPDLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLA--MEVGNY 556
Query: 223 EKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLI 282
E LQ E + + +E + G+ L+L N E+A F + K+A D+ D
Sbjct: 557 ETALQAFERILTEKPASRE----AWYRKGLALLKLENFEEAVKAFDAVATKDA-DYEDAG 611
Query: 283 TEVADTLMSLGHSNSALKYYH-FLETNAGTDNGYLY 317
M L SAL+ + LE +D + Y
Sbjct: 612 VLKGFAQMKLKECASALETFERVLEKKPDSDTAWYY 647
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 26/329 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E AI + RL+P+ + +G A +L ++ A + + L+P W +
Sbjct: 350 GKLEPAIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNR 409
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEP--KDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ G T +A+ +AI+ P +D L F E + EKA E++ ++ K+
Sbjct: 410 KGIVLGKLGKTGEALEAFEEAIKLRPDFEDAWKNRGLLLFASE--ECEKAEEAFAEVLKI 467
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P+++D+ LK G+ ++ LE+ + + P DLS L L E YEK
Sbjct: 468 NPEDIDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYS--LGVALTELGEYEKA 525
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD-LQWKNAIDHADLITE 284
L+ E S L+++ + G + +GN E A F L K A A
Sbjct: 526 LETFEKLA----SENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRKG 581
Query: 285 VADTLMSLGHSNSALKYYHFLET------NAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
+A L+ L + A+K + + T +AG G+ +KL EC A A+ F
Sbjct: 582 LA--LLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKEC-------ASALETFE 632
Query: 339 KALDRFEDNIDARLTLASLLLEEAKEEEA 367
+ L++ D+ A +L ++EEA
Sbjct: 633 RVLEKKPDSDTAWYYRGMILYTLQRQEEA 661
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A ++++ SP PE+ N LGL L N K A + AA +PK+
Sbjct: 1470 YEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAALFNPKNEEALYNAA 1529
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T ++ +++ Y + + P ++ + + + + Y +A +++ + K P+N
Sbjct: 1530 TTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYREALRAFDGVLKRDPEN 1589
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHP-SDADLSVIDLLVAILMENNAYEKTLQH 228
+ A + K + +E L ++P + L + + +A + E YE+ L+
Sbjct: 1590 IKAIYNVGVVCFKQKLYETAARAFKEALSINPWHEQSLRYLGISLAKIGE---YEEALKA 1646
Query: 229 IE 230
E
Sbjct: 1647 FE 1648
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 49 NFEQAISLLKEVVRLSPNLP---ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-DSAL 104
NFE A L++V+ +P+ P E LG+A L +++ A + P+ + AL
Sbjct: 1398 NFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEEAL 1457
Query: 105 WKQ-LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ L+ F +++ + A + Q + P+D +L +E+ + ++A +++E+
Sbjct: 1458 YNMALVLFNLEEYEEAARTF--EQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAA 1515
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
P N +A A +K + S+G + L++ P + D+
Sbjct: 1516 LFNPKNEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDV 1558
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
GLA + + +++ + A L P+ +A W + T A + +A+ +A+ PK
Sbjct: 3 GLAFAEIDRTEASILCFEKALELMPEYAAAWCAMGTVAGKAERYEEALENFERALEINPK 62
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
D ++ Y+ A E ++ + + P N +A + L K G+ ++ LE
Sbjct: 63 DSEACYAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLAKIGKKDLALEALE 122
Query: 195 EYLKVHPSD 203
++LK +P++
Sbjct: 123 DFLKKYPAN 131
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L +A E+A EV++++P ++ G++ LG ++A ++ L P
Sbjct: 447 LLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYP 506
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
L L + G+ +A+ + P D+ ++ +E+G+YE A +++E+I
Sbjct: 507 DLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERI 566
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/154 (17%), Positives = 65/154 (42%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A+ ++R+ P++ + + + LA L N+ A + L P++ W Q
Sbjct: 216 YEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQG 275
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G +A+ + + + +P + + +G +E+A E+ + P+N
Sbjct: 276 LLLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALGPLEKSLEKEPEN 335
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ + L G+ +I E +++P +
Sbjct: 336 YNLWLQKGLILLDTGKLEPAIDAFENAARLNPDN 369
>gi|448516637|ref|XP_003867617.1| Tfc4 RNA polymerase III transcription initiation factor complex
(TFIIIC) subunit [Candida orthopsilosis Co 90-125]
gi|380351956|emb|CCG22180.1| Tfc4 RNA polymerase III transcription initiation factor complex
(TFIIIC) subunit [Candida orthopsilosis]
Length = 979
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 53/430 (12%)
Query: 10 RKKTRKLNKKRGRRK---GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
R+K K NK R++ L P V L A+ + + + A L +V++ P
Sbjct: 103 REKLSKNNKSYYRKRMMRADNRDLDPEVRMNLSLANEAFVRNDLQVAQQLYVDVIKKDPK 162
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
Y +G + + +++AA+L P DS W Q+ + + G QA+Y
Sbjct: 163 NFSAYKAIGEIYKSQEKLDECCSSWLLAANLHPWDSDFWGQVAELSNELGHIDQAIYCYT 222
Query: 127 QAIRAEPK-DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
+AI ++ K + + A Y E + KA + +++I++L+P + + K A ++ + +
Sbjct: 223 RAITSDTKRSANFILERALLYKEKRQFGKALDGFQKIRQLYPQDTNIIKYLAGVYSEQKR 282
Query: 186 TARSIGILEEYL--KVHP-SDAD---------------------------LSVIDLLVAI 215
+I + L ++P +D+D ++V+ L
Sbjct: 283 LNDAINLYMRILDQNINPDTDSDDQYPKFDWPELNILLELHVQHRSLKLGINVLKLAARW 342
Query: 216 LM---------ENNAYE-------KTLQHIEHAQIVRFSGK--ELPLKLKVKAGICYLRL 257
+ EN+ E K L H++ + F K +LP+ ++ K GI L L
Sbjct: 343 IQGRMDETWWDENDDSEFDSKRRFKKLNHLKSRDLADFKTKPYDLPIDIRFKLGILRLGL 402
Query: 258 GNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY-L 316
E+A F L N ADL E L G+ AL + N + + L
Sbjct: 403 DQKEEAMHHFEYLLDDNQAAIADLNFEAGKQLQEYGYYEEALTFLTRAFGNEELVSSFDL 462
Query: 317 YLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKD 376
L +CY + + A A + + L +N+D +L LA L + +A L++ +
Sbjct: 463 VTLLGKCYFEIADYAEAKEAYEELLTHSPNNVDFKLALAETLYHLGDDAQAEALINEVQM 522
Query: 377 LDSLDMNSDK 386
++ ++ +K
Sbjct: 523 VNQKNLKKEK 532
>gi|217076205|ref|YP_002333921.1| tetratricopeptide repeat domain protein [Thermosipho africanus
TCF52B]
gi|217036058|gb|ACJ74580.1| tetratricopeptide repeat domain protein [Thermosipho africanus
TCF52B]
Length = 354
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 38 LGEASLQYAYGNF-EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
L E S++YA + A ++L+ +++ N Y+ LG H LGN + F A
Sbjct: 97 LYELSIEYADKDLLGDAKNILEFAIKVDKNFAPAYDFLGSIHIELGNIEEGIKFLNRAVE 156
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
+ P + L +GD +A+ Y + I P DI +A Y + +YEKAA
Sbjct: 157 IDPWLVQSYSTLGEVYYNQGDYEKAISYWLKEIEYSPNDIFTYFMIADAYTRMKNYEKAA 216
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL 216
++ ++ +N+ A +Q++ + G+T + + +E L P D + I++ I
Sbjct: 217 NILNKLLEIDNNNIIAMYELSQIYREMGKTKEADMVEKEILNAKPIDP--NGIEIWAKIK 274
Query: 217 MENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
M+ N Y++ ++ IE L LK + Y++LG +E+A + +L+
Sbjct: 275 MKYNKYDEIVEVIEPM----IDNTIDSLHLKALLVVPYIKLGKIEEARKYYEELK 325
>gi|414077915|ref|YP_006997233.1| hypothetical protein ANA_C12709 [Anabaena sp. 90]
gi|413971331|gb|AFW95420.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 460
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+Y G+ + AI + +R++PN +TY + GLAHS LG+++SA D Y A +++P
Sbjct: 249 RYHLGDKQSAIDDWTQAIRINPNYADTYYSRGLAHSELGDNQSAIDDYTQAININPNYDL 308
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
++ + GD A+ QAI P + ++GD + A Y Q
Sbjct: 309 AYRNRGIARSELGDKQGAIDDYSQAININPNYDLAYCNRGIARSKLGDKQGAINDYTQAI 368
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ P++ DA G +I + +K++P+DAD
Sbjct: 369 NINPNDADAYFHRGYNHYHLGDNQSAIDDFTQAIKINPNDAD 410
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + + ++PN Y G+A S LG+ + A + Y A +++P D+ +
Sbjct: 321 GDKQGAIDDYSQAININPNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFH 380
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD-------YEKAAESYE 160
GD A+ QAI+ P D + + E+GD Y KAA+ Y+
Sbjct: 381 RGYNHYHLGDNQSAIDDFTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADIYK 440
Query: 161 Q 161
+
Sbjct: 441 K 441
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+++ AI + + ++PN + Y GLA LG+ +SA D + A ++P + +
Sbjct: 220 DYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIRINPNYADTYYSR 279
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPK-DISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI P D++ R + E+GD + A + Y Q + P
Sbjct: 280 GLAHSELGDNQSAIDDYTQAININPNYDLAYR-NRGIARSELGDKQGAIDDYSQAININP 338
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ A K G +I + + ++P+DAD
Sbjct: 339 NYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDAD 376
>gi|119485065|ref|ZP_01619450.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457293|gb|EAW38418.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 815
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 154/362 (42%), Gaps = 38/362 (10%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
+++ +A+L A EQA++L + ++L PN Y +G+ + A +Y
Sbjct: 10 SASQLCQQANLSVAEQKLEQAVTLCHQALQLQPNFAPAYKIMGVIMQMQDQLEEAKYWYN 69
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
A P + + L + + QA+ A++++P + +LA + +
Sbjct: 70 QALEHQPNFAEVHANLGSLYATQQQWEQAIKSYETALKSQPNLAGVYRNLARIWQKNDQQ 129
Query: 153 EKAAESYEQIQKLFPDNV---DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
EKAA + +L PD + D G L L+ Q + I + + +K++P+ A +
Sbjct: 130 EKAAHCQYKAFQLEPDKLQLEDYFNLGKTL-LEQNQIEQVISLYSQAIKLYPNTA--KIY 186
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
LL +N + + + + A +K+ A Y LG+ F+
Sbjct: 187 YLLGQAFSQNEQWTAAISNYKQA-----------IKINQTANHYYNSLGDA------FSQ 229
Query: 270 L-QWKNAID---HADLIT--------EVADTLMSLGHSNSALK-YYHFLETNAGTDNGYL 316
L QW AID H+ I ++AD + H +A+K YY LE N DN +
Sbjct: 230 LQQWNEAIDCYLHSIQIKPDVCWSYLKLADAYLECQHWENAIKTYYQGLELNP--DNYWP 287
Query: 317 YLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKD 376
Y+K+ + Y+ + AI + +A + + LA LL E +E+EAI L +
Sbjct: 288 YIKIGDAYIEQGHKKEAIAIYRQAQQINPNLSTSYYKLADLLQEFYQEDEAIDLYKKALE 347
Query: 377 LD 378
+D
Sbjct: 348 ID 349
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 KLSPGVTK---MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
KL P K +LG+A Q + AIS K+ ++++ YN+LG A S L
Sbjct: 177 KLYPNTAKIYYLLGQAFSQNE--QWTAAISNYKQAIKINQTANHYYNSLGDAFSQLQQWN 234
Query: 86 SAFDFYVIAAHLSPKDSALWKQL----LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
A D Y+ + + P W L Q + A YY Q + P + I
Sbjct: 235 EAIDCYLHSIQIKP--DVCWSYLKLADAYLECQHWENAIKTYY--QGLELNPDNYWPYIK 290
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ Y+E G ++A Y Q Q++ P+ + A L + Q +I + ++ L++ P
Sbjct: 291 IGDAYIEQGHKKEAIAIYRQAQQINPNLSTSYYKLADLLQEFYQEDEAIDLYKKALEIDP 350
Query: 202 S 202
+
Sbjct: 351 N 351
>gi|427739783|ref|YP_007059327.1| cytochrome c biogenesis factor [Rivularia sp. PCC 7116]
gi|427374824|gb|AFY58780.1| cytochrome c biogenesis factor [Rivularia sp. PCC 7116]
Length = 227
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 96/195 (49%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
K +++K + V ++L E G+F AI + ++ L P Y+ +G ++ GN
Sbjct: 30 KVAQSKSTQQVRRLLDEGRRLVKSGDFNGAIRVYQQASSLEPKNGSIYSGIGYLYAQQGN 89
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
+ +A Y A L+P ++ L + GD A R++I+ ++++ I LA
Sbjct: 90 YSAALASYRRAVSLNPNNADYQYALAYVSGSMGDNKTAKNAYRKSIQINRENVNAYIGLA 149
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ +G+Y+ A +YE++ +L P N A + ++ +K GQ+ + G L++ L ++ +
Sbjct: 150 LILLRLGEYDNAKWAYEKVVELDPKNPQAYELRGRILMKKGQSKEAAGALKKALNLYETQ 209
Query: 204 ADLSVIDLLVAILME 218
+ + A+L +
Sbjct: 210 KKWDAVARIDAMLRD 224
>gi|156386822|ref|XP_001634110.1| predicted protein [Nematostella vectensis]
gi|156221189|gb|EDO42047.1| predicted protein [Nematostella vectensis]
Length = 1194
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 204/492 (41%), Gaps = 90/492 (18%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYN---------TLGLAHSALGN 83
GV + +G +Q + GN+E+A+ ++ +++ T N +G+ +LGN
Sbjct: 159 GVRQNIG--VVQESLGNYEEAMKYYQQALQV---FERTGNESKQAGVRQNIGVVQESLGN 213
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLT----FAVQK--GDTAQAMYYIRQAIRA------ 131
++ A +Y A + + Q + VQ G+ +AM Y +QA++
Sbjct: 214 YEEAMKYYQQALQVFERTGNENNQAIVRHNIGVVQNSLGNYEEAMKYYQQALQVFERTGN 273
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
E +R ++ V +G+YE+A + Y+Q ++F + +K A + G S+G
Sbjct: 274 ESNQAIVRQNIGVVQVSLGNYEEAMKYYQQALQVFERTGNESKQ-AGVRQNIGVVQESLG 332
Query: 192 ILEEYLKVHP----------SDADLSVIDLLVAILMEN-NAYEKTLQHIEHA-QIVRFSG 239
EE +K + ++++ +++ + ++ E+ YE+ +++ + A Q+ +G
Sbjct: 333 NYEEAMKYYQQALQVFERTGNESNQAIVRQNIGVVQEHLGNYEEAMKYYQQALQVFERTG 392
Query: 240 KEL-PLKLKVKAGICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLG 293
E ++ G+ LG+ E+A ++L + N D AD++ + SLG
Sbjct: 393 NESDQAGVRQNIGVVQNSLGDYEEAMKYYQQVLQVFERTGNESDQADVLLNIGVVQQSLG 452
Query: 294 HSNSALKYYH-----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE--D 346
+ A+KYY F T + + + +SL A+ ++ +AL FE
Sbjct: 453 NYKEAMKYYQQALQVFERTGNESYQAVVRQSIGVVQVSLGNYEEAMKYYQQALQVFERTG 512
Query: 347 NIDARL----TLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCH 402
N A+ + S+ L K + LD S + + L E K+
Sbjct: 513 NESAKAGVYNNIGSMYL---------------KKQNYLDAESHFTKSFELFESCFTKI-- 555
Query: 403 IYRAKGMPED---FVDAIFPLVCESLC---------VEALRQKVKVKRRLTKGILQQRTK 450
+ +P+ FVD F VC+ L +AL + + R+ IL ++
Sbjct: 556 ----QSLPDSKITFVDT-FIHVCQQLVDVSILLDKPEQALLVSERGRSRVLGDILLEKHG 610
Query: 451 IYNNLPTDSILC 462
+ P+D C
Sbjct: 611 LQKTAPSDKTRC 622
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 16/226 (7%)
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
E +R ++ +G+YE+A + Y+Q ++F ++ A + G R +G
Sbjct: 48 ESDQAGVRQNIGVLQESLGNYEEAMKYYQQALQVF-ESTGNENNQAIVRQNIGVVQRRLG 106
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA-QIVRFSGKEL-PLKLKVK 249
EE +K + L V + V N YE+ +++ + A Q+ +G E ++
Sbjct: 107 NYEEAMKYY--QQALQVFERTVVQRRLGN-YEEAMKYYQQALQVFERTGNESNQAGVRQN 163
Query: 250 AGICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH- 303
G+ LGN E+A + L + N A + + SLG+ A+KYY
Sbjct: 164 IGVVQESLGNYEEAMKYYQQALQVFERTGNESKQAGVRQNIGVVQESLGNYEEAMKYYQQ 223
Query: 304 ----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
F T + + + SL A+ ++ +AL FE
Sbjct: 224 ALQVFERTGNENNQAIVRHNIGVVQNSLGNYEEAMKYYQQALQVFE 269
>gi|225430656|ref|XP_002270163.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Vitis vinifera]
gi|296085167|emb|CBI28662.3| unnamed protein product [Vitis vinifera]
Length = 986
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 25/277 (9%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
+L ++ Y +F+ I+ +E +++ P E Y + A GN A +Y+IA
Sbjct: 98 NLLLMGAIYYQLHDFDMCIARNEEALQIDPRFAECYGNMANAWKEKGNVDLAIRYYLIAI 157
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P W L + ++KG +A RQA+ P + +L +F G ++A
Sbjct: 158 ELRPNFCDAWSNLASAYMRKGRLNEAAQCCRQALAINPLLVDAHSNLGNFMKAQGLIQEA 217
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--LSVIDLLV 213
Y + ++ P A A LF++ G R++ +E +K+ P+ AD L++ ++
Sbjct: 218 YSCYIEALRIQPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYK 277
Query: 214 AILMENNA---YEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADL 270
A+ M A Y++ LQ + E + AG Y E+ ++ A +
Sbjct: 278 ALGMPQEAIVCYQRALQ----------TRPEYAMAYGNMAGTYY------EQGQMDMAIV 321
Query: 271 QWKNAIDHADLITE----VADTLMSLGHSNSALKYYH 303
+K AI+ E + + L +G + A++ YH
Sbjct: 322 HYKQAIECDSGFLEAYNNLGNALKDVGRIDEAIQCYH 358
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +A+ KE V+L P + Y LG + ALG + A Y A P+ + +
Sbjct: 246 GDLTRALQYYKEAVKLKPTFADAYLNLGNVYKALGMPQEAIVCYQRALQTRPEYAMAYGN 305
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ ++G A+ + +QAI + + +L + ++G ++A + Y Q L P
Sbjct: 306 MAGTYYEQGQMDMAIVHYKQAIECDSGFLEAYNNLGNALKDVGRIDEAIQCYHQCLALQP 365
Query: 168 DNVDATKTGAQLFLK 182
++ A ++++
Sbjct: 366 NHPQALTNLGNIYME 380
>gi|218189598|gb|EEC72025.1| hypothetical protein OsI_04909 [Oryza sativa Indica Group]
Length = 890
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y F+ I+ +E V + PN PE +N++ A G+ +A FYV A L P
Sbjct: 93 GAVYYQLREFDMCIAKNEEAVAIQPNCPECFNSIANAWREKGDVDNAIQFYVHAVQLRPT 152
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD-------YE 153
+ W L +KG+ +QA QA+ P HLA Y +GD Y
Sbjct: 153 FADAWTNLANAYTRKGNLSQAAECCHQALALNP-------HLADAYCNLGDVLKAQGLYR 205
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDL 211
+A Y + P +A A L ++ G ++ +E +K +P+ DA L++ +L
Sbjct: 206 EAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAAVYYKEAIKCNPAFYDAHLNLGNL 265
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM-----EKAEIL 266
M +A IV F + K + + Y+ GN+ E+ ++
Sbjct: 266 YKVTGMRQDA------------IVCFQNAA---RAKPENAVAYVFSGNLGNAYHEQGQLD 310
Query: 267 FADLQWKNAI----DHADLITEVADTLMSLGHSNSALKYY 302
A L ++ AI + + + + L G + A+ Y
Sbjct: 311 LAILSYRQAIHCNSSYVEAYNNLGNALKDAGRNEEAISCY 350
>gi|302691768|ref|XP_003035563.1| hypothetical protein SCHCODRAFT_13910 [Schizophyllum commune H4-8]
gi|300109259|gb|EFJ00661.1| hypothetical protein SCHCODRAFT_13910 [Schizophyllum commune H4-8]
Length = 989
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 156/396 (39%), Gaps = 54/396 (13%)
Query: 14 RKLNKKRGRRKGSKN---KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
++ NK +G+ K + LS V +LG+ + Y + AI L+ EV+R+ P
Sbjct: 75 KRANKGKGKGKRAPRAGPTLSHQVRALLGDGNQAYVDADLPAAIRLMSEVIRIEPRAASA 134
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
+ L ++ L A ++AAHL +D W +L + G QA+Y +A
Sbjct: 135 WTVLAQCYADLNMPAPALQLRIMAAHLR-RDPEEWIRLAQQSRVNGAAQQALYCYAKAYA 193
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
A+P ++++ A+ E+ D A S + + P +++ + ++ G A
Sbjct: 194 ADPDNVAVLWDRAALAREVNDLRAARASLVALLRRLPHDLNVLAALRPVLVELGDLAACA 253
Query: 191 GILE----EYLKVHPS---DAD-----LSVIDLLVAILMEN--NAYEKTLQHIEHAQIVR 236
E Y + P+ AD V+++LV + + A+++ + H+ +
Sbjct: 254 ECYETAWKHYQEAFPTGQAGADGAVNPFGVLEILVLADLHSALGAHQRAI-HVIKTGMRW 312
Query: 237 FSGK---------------ELP--------------------LKLKVKAGICYLRLGNME 261
G+ +LP L + + + +R+G+ E
Sbjct: 313 LQGRGTQAYWDSVPDDREYDLPTMMTRPLNEGDIPPGYFPLDLNARQRLAVARIRMGDTE 372
Query: 262 KAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLA 321
+ ++ + + + D+A L E+ D G A Y L + GT + + ++ A
Sbjct: 373 EGKLHASVVLAEEPTDYAPLFAEIGDAYFEKGLWAEAKGVYEVLGGDVGTSSIQILMQAA 432
Query: 322 ECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
CY L E A + + DA++ LA +
Sbjct: 433 ACYHMLGELQEAAEVYESVIQADPTLNDAKMKLAGI 468
>gi|395324791|gb|EJF57225.1| TPR-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 1032
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
K KKRGRR G LS V ++GE + Y N + I +++EV+R+ P ++ L
Sbjct: 125 KTKKKRGRRSGPV--LSQQVRALVGEGNQAYVDANLPETIRIMQEVIRIEPRAAPAWSVL 182
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
+S +G A ++AAHL+ D+ W L + G QA+Y + +P
Sbjct: 183 AQCYSDMGERGKALQLRIMAAHLN-HDADEWADLARQSRDLGYNQQALYCYGKICSLDPT 241
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++S AS E+GD + A + + K P
Sbjct: 242 NVSALWDRASLAKELGDMKTARSTLLAMLKRLP 274
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
L + + + I +R G+ME+ ++ + ++ ++A L +E+AD + A
Sbjct: 405 LDVNARHRLAIARIRGGDMEEGKMHAKVILGQDVAEYAPLFSEIADAYFEREMYSEAGHI 464
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
Y L +AGT + Y+ L+ A C + + A + + N DA++ LA +L
Sbjct: 465 YEMLGGDAGTSSMYVLLQAAACRRMVGDLKEAAEVYEHVIQADPTNNDAKMKLAEIL 521
>gi|443313119|ref|ZP_21042732.1| Flp pilus assembly protein TadD [Synechocystis sp. PCC 7509]
gi|442776927|gb|ELR87207.1| Flp pilus assembly protein TadD [Synechocystis sp. PCC 7509]
Length = 296
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI+ ++ ++++P TY L + H L + K+A Y A L+P +A ++
Sbjct: 86 GDPTGAIADYQQALKINPQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYEN 145
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+GD A+ +QAIR +PK+ S+ + Y I D + A S+ Q KL P
Sbjct: 146 RGNLVDDQGDPQAALADYKQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKP 205
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
D A + F G + ++ + L+++P AD L+ I ++NN
Sbjct: 206 DYYSAYNSRGNAFASLGDSQAALKDFDRALQINPKAADTYYNRGLLYIELKNN 258
>gi|224127794|ref|XP_002329179.1| predicted protein [Populus trichocarpa]
gi|222870960|gb|EEF08091.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 633 FIRYLRAKYKDCVPPIIISGHQFTM-ASHHQDAARCYLEAYKLLPENPLINL 683
F+RY+R K+K CV PI+IS H TM SHHQDAAR YL+AY L+ E LINL
Sbjct: 26 FLRYMRRKHKKCVQPIVISAHHSTMLISHHQDAARYYLKAYILMQECRLINL 77
>gi|406701332|gb|EKD04481.1| RNA polymerase III transcription factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 977
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
++ +K + S V +LG A+L Y + +A++L EV+R P + ++TL + +G
Sbjct: 98 KRPAKRRPSHEVQLLLGRANLAYITQDHNEAVNLFLEVIRHDPQVQAAWSTLASVYEEMG 157
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
N + A AH+ +D W++L +G+ QA+Y R+A++ + + + L
Sbjct: 158 NAEMARQMKFCGAHIE-EDIGTWRELADQFRSEGNLTQALYCYRKALKIDGSRLDIVWQL 216
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFP 167
+ Y E Y KA E+ +I + P
Sbjct: 217 VNIYRETQSYNKAVEAIRKIHRAEP 241
>gi|392578124|gb|EIW71252.1| hypothetical protein TREMEDRAFT_27203, partial [Tremella
mesenterica DSM 1558]
Length = 882
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
K++ S V ++LG+ ++ Y G + AI L EV+R P++ + +L + LG+ ++
Sbjct: 3 KHRPSRQVQQVLGQGNIAYIDGRHDDAIRLFLEVIRHDPHVFSAWTSLASCYDELGDEEA 62
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A AAH+ ++ W++L ++ Q +Y +R+A++ +P D+ +++ Y
Sbjct: 63 ARQMRFFAAHVE-NEAETWRELAAQFKERDQIPQCLYCLRKALQVDPDDVGSLWEISALY 121
Query: 147 VEIGDYEKAAESYEQIQK 164
E KA E++++I K
Sbjct: 122 REQNKISKAVEAFKKILK 139
>gi|42522206|ref|NP_967586.1| O-linked GlcNAc transferase [Bdellovibrio bacteriovorus HD100]
gi|39574737|emb|CAE78579.1| putative O-linked GlcNAc transferase [Bdellovibrio bacteriovorus
HD100]
Length = 348
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 7/223 (3%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRL----SPNLPETYNTLGLAHSALGNHKSAF 88
G + G A+ Y G ++A+ E + + + L ETY +G G+ A
Sbjct: 123 GFESLHGYATSLYKSGRDQEALDKYFEALAVLTDETDTLFETYKNMGNIFVRQGDFDGAE 182
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
++Y A ++P+ L T VQ+GD +++Y R+A+ P++ + LA + +
Sbjct: 183 EYYNKAYTMNPQSDVLLVNFGTLEVQRGDYDKSLYCFRKAVEINPENDKAWVGLAMVHSQ 242
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
GD E A + E + P N A A L+ G+ ++I L+ YL D D+S+
Sbjct: 243 FGDMELAWANIETAIDINPQNRTAVHLAANWGLRDGKLQKAIEALQGYLASVEEDEDMSL 302
Query: 209 IDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL-PLKLKVKA 250
+ L+ +L ++ + IE + KE+ LK K+ A
Sbjct: 303 V--LINLLCSAGQVDQAMLEIERVLLWNPDHKEVRNLKKKIIA 343
>gi|323449976|gb|EGB05860.1| hypothetical protein AURANDRAFT_72123 [Aureococcus anophagefferens]
Length = 1119
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 13/111 (11%)
Query: 7 GGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
GG RK+ R G KL V +LGEA + G+ E+AISLL EVVR P
Sbjct: 37 GGARKRAR----------GGAKKLPAEVAALLGEAHAEVIGGDEERAISLLGEVVRRVPE 86
Query: 67 LPETYNTLGLAHSALG---NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQ 114
P+ Y TL + G + A ++AAHL+P D+ W+++ +++
Sbjct: 87 APDAYATLSEIYEGRGAAEDEAKALQLALVAAHLAPSDATAWRRVAVLSME 137
>gi|260945285|ref|XP_002616940.1| hypothetical protein CLUG_02384 [Clavispora lusitaniae ATCC 42720]
gi|238848794|gb|EEQ38258.1| hypothetical protein CLUG_02384 [Clavispora lusitaniae ATCC 42720]
Length = 873
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 155/389 (39%), Gaps = 66/389 (16%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+L P V +A+ + +F+ AI EV+RL Y T+G + G+
Sbjct: 5 ELKPEVRDNFAKANEAFVKQDFDTAIKYYLEVIRLDRRNFGAYKTMGEIYQMKGDMNKCC 64
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI----SLRIHLAS 144
++ AA P D W + + Q G QA+Y AI PKD + A
Sbjct: 65 GMWLYAALCVPWDIEFWGTVAELSTQLGHIDQAIYCYNHAINYRPKDTLPNPQFLLDRAM 124
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI----GILEEYLKVH 200
+ + + +A E ++++ ++FP + K A ++ + + + ++ ILE+ +
Sbjct: 125 LHRQKRLFGRALEGFQRLHRMFPTDPQYVKHLASVYCEQKRLSDAVRLYKNILEDNINAK 184
Query: 201 PSDA----DLSVIDLLVAILMENNAYEKTLQHIEHA------------------------ 232
P D S +++L +L+ + +++ ++ I+ A
Sbjct: 185 PDQKYVPFDWSALNILCELLITQHNWKEGVKMIKAAARFLQDRGDESWWTDEDDSEFDER 244
Query: 233 -----------QIVRFSGKE--LPLKLKVKAGICYLRLGNMEKA----EILFADLQWKNA 275
++ ++ G+E LP+ ++ K L L N E+A E L+ + ++
Sbjct: 245 RPSVILKFHPHELQKYMGREYGLPIDIRFKLAQFRLELDNSEEALRHFEFLYHE---EDL 301
Query: 276 IDHADLITEVADTLMSLGHSNSALKYY-HFLETN--AGTDNGYL-------YLKLAECYL 325
D ADL E L G ALK+ ++ N A D + + +CY+
Sbjct: 302 FDVADLFFEAGKLLEEKGLQEDALKFLAQSIQRNGSAAEDEDQTEEFRSEAMVLMGKCYM 361
Query: 326 SLKERAHAIMFFYKALDRFEDNIDARLTL 354
L + +A F L +NID +L L
Sbjct: 362 ELYDYENAKEVFTHVLQNEPNNIDLQLML 390
>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 427
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y GN E+AIS ++ + + PNL LGLA A+G+ ++A Y A L+P +
Sbjct: 130 YQQGNIEEAISAYQQAIAIDPNLAAARYNLGLALEAVGDTEAALSEYTQAVRLNPNSAVA 189
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIR----------------------AEPKDISLRI-- 140
L ++ A+ +RQA+R E K+ LR
Sbjct: 190 KYNLALLLAKQNQVDSAIAALRQALRNDSQFVQAHYQLGLLLAQQNQITEAKNSFLRATQ 249
Query: 141 ----------HLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
L +++ GD E+A + + ++ PDNVDA + ++ G+ ++I
Sbjct: 250 INSRFAPAHYRLGLIFLQQGDAEEAIRRFNWVTQIDPDNVDAYRQLGAALIQNGEYEQAI 309
Query: 191 GILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
LE + + P D+ L+ +L VA L N YE + + A
Sbjct: 310 AALERAISLDPYDS-LAHYNLAVA-LHRNQQYEDAISEYQQA 349
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 17/265 (6%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+ ++Y +F+ A ++ ++ P +P LG A G +A + Y +A L P
Sbjct: 57 QGVMRYNRSDFKAAELAFRKALQEDPFIPMARYLLGNALFQQGQIAAAAEQYQMAIGLDP 116
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
+ L Q+G+ +A+ +QAI +P + R +L +GD E A Y
Sbjct: 117 NMAEAHYNLGLMLYQQGNIEEAISAYQQAIAIDPNLAAARYNLGLALEAVGDTEAALSEY 176
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILM-- 217
Q +L P++ A A L K Q +I L + L+ +D+ + +L+
Sbjct: 177 TQAVRLNPNSAVAKYNLALLLAKQNQVDSAIAALRQALR---NDSQFVQAHYQLGLLLAQ 233
Query: 218 ENNAYEKTLQHIEHAQI-VRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI 276
+N E + QI RF+ L G+ +L+ G+ E+A F W I
Sbjct: 234 QNQITEAKNSFLRATQINSRFAPAHYRL------GLIFLQQGDAEEAIRRF---NWVTQI 284
Query: 277 --DHADLITEVADTLMSLGHSNSAL 299
D+ D ++ L+ G A+
Sbjct: 285 DPDNVDAYRQLGAALIQNGEYEQAI 309
>gi|357473879|ref|XP_003607224.1| hypothetical protein MTR_4g074700 [Medicago truncatula]
gi|355508279|gb|AES89421.1| hypothetical protein MTR_4g074700 [Medicago truncatula]
Length = 104
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 21/98 (21%)
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQ--------LFL-------------KC 183
Y EI +Y+KAAE+YEQ+ +L ++VDA K A+ +F+ KC
Sbjct: 2 LYAEIQNYQKAAEAYEQVYQLCREDVDALKAAAKVSHLLLSCIFVLPKVWSSPYQKKKKC 61
Query: 184 GQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
GQ RSI ILE YLK P + SV+DLL AIL+++
Sbjct: 62 GQVERSICILEYYLKSKPDGVNASVVDLLGAILIDSGG 99
>gi|374812493|ref|ZP_09716230.1| hypothetical protein TpriZ_01350 [Treponema primitia ZAS-1]
Length = 343
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N++ AI + +RL+PNLPE YN G A++ G A + A L P + +
Sbjct: 44 NYDSAIGYYNQAIRLNPNLPEAYNNRGSAYAVKGEQVWALADFTEAIRLKPNYTFAYNNR 103
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+++GD +A+ QAI +P + +V+ G+YE+A Y+Q +L P
Sbjct: 104 GLLHIERGDYERALSDFSQAILIDPGYAKAYRNRGDAWVQKGEYERAISDYDQAIRLSPS 163
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
A + + G+ ++ + ++++P+ A+ +
Sbjct: 164 YAMAYGSRGNAYANRGEYDKAAADYNQAIRINPNYAEAYI 203
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 8/193 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++E+A+S + + + P + Y G A G ++ A Y A LSP + +
Sbjct: 111 GDYERALSDFSQAILIDPGYAKAYRNRGDAWVQKGEYERAISDYDQAIRLSPSYAMAYGS 170
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL-- 165
+G+ +A QAIR P I+ + Y +IG + E Y ++ +
Sbjct: 171 RGNAYANRGEYDKAAADYNQAIRINPNYAEAYINRGNIYYDIGYTNRGLEDYTRVLDINL 230
Query: 166 --FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-NAY 222
PD + + G+ R++ E +K+ P +L+V+ + N Y
Sbjct: 231 SYGPDLAKSYANRGLAYNNMGEYRRALTDYNEAIKLRP---NLAVVFRHRGVSYTNLGEY 287
Query: 223 EKTLQHIEHAQIV 235
+ ++ HA I+
Sbjct: 288 DLAIEDFTHAIIL 300
>gi|241952981|ref|XP_002419212.1| subunit of the RNA polymerase III transcription initiation factor
complex (TFIIIC), putative [Candida dubliniensis CD36]
gi|223642552|emb|CAX42801.1| subunit of the RNA polymerase III transcription initiation factor
complex (TFIIIC), putative [Candida dubliniensis CD36]
Length = 1059
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 159/391 (40%), Gaps = 53/391 (13%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KR + +L P V L +A+ + + + A L EV++ P Y LG
Sbjct: 181 KRKMMRADNRELDPEVRSNLSQANEAFVRKDLQVAQQLYLEVIKKDPKNFSAYKALGEIS 240
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PKDIS 137
A +++++AA++ P D+ W Q+ + + G QA+Y +AI + K
Sbjct: 241 KAQEQLNECCNYWLLAANIHPWDTEFWGQVAQLSAELGHIDQAVYCYGRAITPDITKSCE 300
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+ A Y E + KA + ++++++L+P + + K A ++ + + +I + + L
Sbjct: 301 FILQRAILYQERKQFGKALDGFQKVRQLYPKDSNIIKYLAAVYSEQKRLNDAINLYMKVL 360
Query: 198 --KVHPSDA--------DLSVIDLLVAILMENNAYEKTLQHIEHA--------------- 232
+HP D + +++L+ + ++N+++ L ++ A
Sbjct: 361 DSNIHPERESSELYPKFDWAELNILLELHLQNHSWRMGLNVLKLASRWIQNRSQETWWDE 420
Query: 233 -QIVRFSGKE-----------------------LPLKLKVKAGICYLRLGNMEKAEILFA 268
+ + F ++ LP+ ++ K G L L + A F
Sbjct: 421 NEDLEFDSRQRFEVISALSSQDQIDLAENKPFDLPIDIRFKLGCLRLELQQKDVAVQHFN 480
Query: 269 DLQWKNAIDHADLITEVADTLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAECYLSL 327
L + D ADL E L GH ALK+ +E T + L LA+CY +
Sbjct: 481 YLLEEQ--DVADLHFEAGKLLEEHGHYEDALKFLSRAMEDAEFTTSLELVQLLAKCYFEV 538
Query: 328 KERAHAIMFFYKALDRFEDNIDARLTLASLL 358
+ + + L DN+D +L+LA L
Sbjct: 539 GDYHESKQAYEALLQHDPDNLDLKLSLAENL 569
>gi|110597820|ref|ZP_01386103.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
13031]
gi|110340545|gb|EAT59028.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
13031]
Length = 592
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 3/166 (1%)
Query: 43 LQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
L YAY G +AI +E VR++P ++ LG A+ G + Y A L P
Sbjct: 309 LGYAYIQNGELSKAIPAYQEAVRINPANAHYWSDLGAAYGRAGQQTKKIEAYQQAVSLDP 368
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
W L + G++ +++ +QA+R P + L Y IG +K ES+
Sbjct: 369 DLENSWINLGIAYNENGNSEKSLNAYQQALRISPDNAGSWTQLGIIYGRIGRQDKQIESF 428
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ ++ D +A + K GQ A++I ++ L+++P ++D
Sbjct: 429 QKAVRINSDYSNAWLNLGSAYQKTGQFAKAIEAFKQALRINPENSD 474
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 75/156 (48%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN E++++ ++ +R+SP+ ++ LG+ + +G + + A ++ S W
Sbjct: 385 GNSEKSLNAYQQALRISPDNAGSWTQLGIIYGRIGRQDKQIESFQKAVRINSDYSNAWLN 444
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + + G A+A+ +QA+R P++ + L Y ++ + KA +SY+Q ++ P
Sbjct: 445 LGSAYQKTGQFAKAIEAFKQALRINPENSDGWLKLGFSYRDMCQFTKALDSYKQAVRINP 504
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
N +A A + +E L+++P +
Sbjct: 505 QNSNAWVCLGVAHGTALNEAEELAAYQEALRINPEN 540
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 54 ISLLKEVVRLSPNLPE---TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
ISLL R S P+ ++ LG A+ G A Y A ++P ++ W L
Sbjct: 286 ISLLDICQRWSTAQPQNCSSWRYLGYAYIQNGELSKAIPAYQEAVRINPANAHYWSDLGA 345
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ G + + +QA+ +P + I+L Y E G+ EK+ +Y+Q ++ PDN
Sbjct: 346 AYGRAGQQTKKIEAYQQAVSLDPDLENSWINLGIAYNENGNSEKSLNAYQQALRISPDNA 405
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ QL + G+ R +E + K ++D S A L +AY+KT Q
Sbjct: 406 G---SWTQLGIIYGRIGRQDKQIESFQKAVRINSDYS-----NAWLNLGSAYQKTGQ 454
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G F +AI K+ +R++P + + LG ++ + A D Y A ++P++S W
Sbjct: 453 GQFAKAIEAFKQALRINPENSDGWLKLGFSYRDMCQFTKALDSYKQAVRINPQNSNAWVC 512
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + A+ + ++A+R P++ +L Y+E G K+ E Y +++ P
Sbjct: 513 LGVAHGTALNEAEELAAYQEALRINPENNIALFNLGHDYLEHGHQSKSLEVYSRLKVAEP 572
Query: 168 D 168
+
Sbjct: 573 E 573
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 124/289 (42%), Gaps = 18/289 (6%)
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W + V++ D + ++ A+P++ S +L Y++ G+ KA +Y++ +
Sbjct: 272 WVNKVNAEVEQQDWISLLDICQRWSTAQPQNCSSWRYLGYAYIQNGELSKAIPAYQEAVR 331
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
+ P N + + GQ + I ++ + + P D + S I+L +A EN EK
Sbjct: 332 INPANAHYWSDLGAAYGRAGQQTKKIEAYQQAVSLDP-DLENSWINLGIA-YNENGNSEK 389
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+L + Q +R S ++ GI Y R+G +K F N+ D+++
Sbjct: 390 SLN--AYQQALRISPDNAGSWTQL--GIIYGRIGRQDKQIESFQKAVRINS-DYSNAWLN 444
Query: 285 VADTLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
+ G A++ + L N +G +LKL Y + + A+ + +A+
Sbjct: 445 LGSAYQKTGQFAKAIEAFKQALRINPENSDG--WLKLGFSYRDMCQFTKALDSYKQAVRI 502
Query: 344 FEDNIDARLTLA---SLLLEEAKE----EEAITLLSPPKDLDSLDMNSD 385
N +A + L L EA+E +EA+ ++P ++ ++ D
Sbjct: 503 NPQNSNAWVCLGVAHGTALNEAEELAAYQEALR-INPENNIALFNLGHD 550
>gi|220907898|ref|YP_002483209.1| hypothetical protein Cyan7425_2491 [Cyanothece sp. PCC 7425]
gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 689
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+AI+ ++V++L P E YN LG A+ A+G + A D + A L P D LW L
Sbjct: 223 QMREAIACYEKVIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFRWATALKPDDLTLWYNL 282
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+++ D A R + P+ + + L S V GD A+ +Y+Q KL P+
Sbjct: 283 GKTLLEQADWTGAAACFRHVLALNPQLSYIHVLLGSALVGQGDLPAASAAYQQALKLDPE 342
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
V A A L+ G+ ++ + P +A+ S+
Sbjct: 343 LVAAHHGIASALLESGEVDAALLHYNHLCHLQPDNAEFSL 382
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 10/253 (3%)
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
A Q+GD A+ Y RQA++ P L +L GD A +Y+Q KL +++
Sbjct: 47 IAAQQGDVETAISYFRQAVQVAPAQADLHYNLGYALEAWGDGPAAIAAYQQALKLNRNHL 106
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE 230
A +L L+ G+ A +I + +++ P D L+ L A+ + + +++
Sbjct: 107 AACYNLGELHLQRGEYAGAIPCFQWAIQLQP-DLSLAHYKLGTALQQQGDPKAAVSCYLQ 165
Query: 231 HAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF-ADLQWKNAIDHADLITEVADTL 289
Q+ + + G YL LG +E A F + LQ + DH + +
Sbjct: 166 ALQL-----QPDLVVAHCNLGSAYLDLGQLEAAITAFQSALQLQP--DHTGALFNLGLAR 218
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ A+ Y + N +Y L YL++ + AI F A D++
Sbjct: 219 QTQQQMREAIACYEKV-IQLEPQNSEVYNNLGNAYLAVGQPERAIDVFRWATALKPDDLT 277
Query: 350 ARLTLASLLLEEA 362
L LLE+A
Sbjct: 278 LWYNLGKTLLEQA 290
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 46 AYGNFEQAISLLKEVVRLSPN-LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
A+G+ AI+ ++ ++L+ N L YN LG H G + A + A L P S
Sbjct: 84 AWGDGPAAIAAYQQALKLNRNHLAACYN-LGELHLQRGEYAGAIPCFQWAIQLQPDLSLA 142
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+L T Q+GD A+ QA++ +P + +L S Y+++G E A +++ +
Sbjct: 143 HYKLGTALQQQGDPKAAVSCYLQALQLQPDLVVAHCNLGSAYLDLGQLEAAITAFQSALQ 202
Query: 165 LFPDNVDATKTGAQLFLKCG-----QTARSIGILEEYLKVHPSDADL 206
L PD+ TGA L Q +I E+ +++ P ++++
Sbjct: 203 LQPDH-----TGALFNLGLARQTQQQMREAIACYEKVIQLEPQNSEV 244
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG A L G E AI+ + ++L P+ LGLA + A Y L
Sbjct: 180 LGSAYLDL--GQLEAAITAFQSALQLQPDHTGALFNLGLARQTQQQMREAIACYEKVIQL 237
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P++S ++ L + G +A+ R A +P D++L +L +E D+ AA
Sbjct: 238 EPQNSEVYNNLGNAYLAVGQPERAIDVFRWATALKPDDLTLWYNLGKTLLEQADWTGAAA 297
Query: 158 SYEQIQKLFP 167
+ + L P
Sbjct: 298 CFRHVLALNP 307
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 145/379 (38%), Gaps = 62/379 (16%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+ K+L +A Y G +A L + V++ P + LG+ + G+ ++A ++
Sbjct: 4 LQKLLTQAYRHYQAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQ 63
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY- 152
A ++P + L L GD A+ +QA++ ++ +L +++ G+Y
Sbjct: 64 AVQVAPAQADLHYNLGYALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGELHLQRGEYA 123
Query: 153 ---------------------------------EKAAESYEQIQKLFPDNVDATKTGAQL 179
+ A Y Q +L PD V A
Sbjct: 124 GAIPCFQWAIQLQPDLSLAHYKLGTALQQQGDPKAAVSCYLQALQLQPDLVVAHCNLGSA 183
Query: 180 FLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN------AYEKTLQ-HIEHA 232
+L GQ +I + L++ P D ++ +L +A + YEK +Q +++
Sbjct: 184 YLDLGQLEAAITAFQSALQLQP-DHTGALFNLGLARQTQQQMREAIACYEKVIQLEPQNS 242
Query: 233 QIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLIT--EVADTLM 290
++ G YL +G E+A +F +W A+ DL + TL+
Sbjct: 243 EVYN------------NLGNAYLAVGQPERAIDVF---RWATALKPDDLTLWYNLGKTLL 287
Query: 291 SLGH-SNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
+ +A + H L N Y+++ L + + A + +AL + +
Sbjct: 288 EQADWTGAAACFRHVLALNPQLS--YIHVLLGSALVGQGDLPAASAAYQQALKLDPELVA 345
Query: 350 ARLTLASLLLEEAKEEEAI 368
A +AS LLE + + A+
Sbjct: 346 AHHGIASALLESGEVDAAL 364
>gi|300114393|ref|YP_003760968.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
C-113]
gi|299540330|gb|ADJ28647.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
C-113]
Length = 931
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 153/355 (43%), Gaps = 30/355 (8%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A +++ G+++ A S+LK ++ PN +G G + ++ P+
Sbjct: 347 AVVRFHKGDYKGAESVLKPLLARYPNDTHILTLMGDIALRQGKAREGTGYFQQVTIQEPE 406
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+A + +L G+ Q + + +A++ EP+ + + +++ +++KA E+ +
Sbjct: 407 SAAAYMKLGLGLEFSGEHQQGIQMLEKALKLEPQMPQADLLVILSHLQARNFDKAIEAAQ 466
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD-------ADLSV----- 208
Q+ + +PD+ + +L G+ A++ E LKV P A+L +
Sbjct: 467 QMHRKYPDSPEPLTLMGGAYLGKGEKAKARSAFREALKVAPGAPNAIHNLANLEIQKGNL 526
Query: 209 ---IDLLVAILMEN----------NAYEKTLQHIEHAQIV---RFSGKELPLKLKVKAGI 252
I L L N A E+ +I A+I+ L ++ G
Sbjct: 527 EKAISLYQQTLKYNPNHLHTLLRLAALEQQRGNIAKAKILLEQAMQAHPQALNPRLLLGD 586
Query: 253 CYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD 312
YLR G +KA + +D+Q D+ L+ ++LG S +AL+Y++ L + D
Sbjct: 587 YYLRDGQPQKALAITSDIQ-DTFPDNPALLALAGKIQLALGKSRNALRYFNKL-VSLQPD 644
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEA 367
+ + +LA Y K+ K L ++ AR +A LL++E K+EEA
Sbjct: 645 SATAHYELARAYYETKQFTKTQTELEKTLVLDPNHAGARFVMARLLMQEGKQEEA 699
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP ++G A L G +A S +E ++++P P + L GN + A
Sbjct: 475 SPEPLTLMGGAYL--GKGEKAKARSAFREALKVAPGAPNAIHNLANLEIQKGNLEKAISL 532
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y +P +L Q+G+ A+A + QA++A P+ ++ R+ L +Y+ G
Sbjct: 533 YQQTLKYNPNHLHTLLRLAALEQQRGNIAKAKILLEQAMQAHPQALNPRLLLGDYYLRDG 592
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+KA IQ FPDN ++ L G++ ++ + + + P A
Sbjct: 593 QPQKALAITSDIQDTFPDNPALLALAGKIQLALGKSRNALRYFNKLVSLQPDSA 646
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 139/349 (39%), Gaps = 18/349 (5%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
PGVT G L + + A++ ++ + +P G+AH G + A
Sbjct: 272 PGVTYAQG--LLYFQQQQYADALTDFQKTLNQNPKYMPAVFYAGIAHYQQGQMEQAERLL 329
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
P+ A K L KGD A ++ + P D + + + G
Sbjct: 330 QQFLAYFPQSEAAAKVLAVVRFHKGDYKGAESVLKPLLARYPNDTHILTLMGDIALRQGK 389
Query: 152 YEKAAESYEQIQKLFPDNVDA-TKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSV 208
+ ++Q+ P++ A K G L G+ + I +LE+ LK+ P ADL V
Sbjct: 390 AREGTGYFQQVTIQEPESAAAYMKLGLGLEF-SGEHQQGIQMLEKALKLEPQMPQADLLV 448
Query: 209 IDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFA 268
I ++ L N ++K IE AQ + + P L + G YL G KA F
Sbjct: 449 I---LSHLQARN-FDKA---IEAAQQMHRKYPDSPEPLTLMGG-AYLGKGEKAKARSAFR 500
Query: 269 DLQWKNAIDHADLITEVADTLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAECYLSL 327
+ K A + I +A+ + G+ A+ Y L+ N ++ + L+LA
Sbjct: 501 EA-LKVAPGAPNAIHNLANLEIQKGNLEKAISLYQQTLKYN--PNHLHTLLRLAALEQQR 557
Query: 328 KERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKD 376
A A + +A+ ++ RL L L + + ++A+ + S +D
Sbjct: 558 GNIAKAKILLEQAMQAHPQALNPRLLLGDYYLRDGQPQKALAITSDIQD 606
>gi|256072230|ref|XP_002572439.1| o-linked n-acetylglucosamine transferase ogt [Schistosoma mansoni]
Length = 954
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 157/394 (39%), Gaps = 41/394 (10%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
K RG + +L + + LGEA FE A + +++ +P + Y L
Sbjct: 126 KLRGPLISKRARLPIELAQYLGEAERHLNNDEFEHAERICYQIIDTAPQASQPYIVLAEI 185
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
GN + A +F AA +P D W L+ +A + D A++Y RQA+R D S
Sbjct: 186 SFRRGNQEKAKEFLYQAAQRNPSDQNTWLTLMDWAEEAEDFPLAIHYARQALRRNRADTS 245
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV-----DATKTGAQLFLKCGQTARSIGI 192
LR L G +A + + P++ + + A F K S+
Sbjct: 246 LRQRLIDLCHVAGRSREALQLRLAALSVTPESTGEEQFEVARELADQFFKLLDPHNSVKA 305
Query: 193 LEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH--------------------- 231
E + +P + + ++I+++ Y++ L+
Sbjct: 306 YENAFEQYPDHGTDNDRNSALSIMLQMKRYDQALKFFTSFCGVKLYLNSGDLFDMDRHSS 365
Query: 232 --AQIVRFSGKELP------LKLKVKAGICYLRLGNM--EKAEILFADLQWKNAIDHADL 281
+ + +F E P L+LK+ + +L LG + + E + + +N ++D
Sbjct: 366 KLSSVEKFKRCEFPDNMAVELQLKLFLILAHLGLGPLVVSRVESTYTN---ENITKYSDW 422
Query: 282 ITEVADTLMSLGHSNSALKYYHFL-ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
+ ++ + A++ L ++N ++ LAECYL E AI +
Sbjct: 423 LLDIVVAYKEKNLYSIAIQLILKLKKSNVTCKLVQVWTLLAECYLEAGETESAIKAYRHV 482
Query: 341 LDRFE-DNIDARLTLASLLLEEAKEEEAITLLSP 373
++ + + DARL L +LL + +EA+ L+P
Sbjct: 483 IENLDPRHTDARLGLVNLLRRLGRNQEALKFLNP 516
>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 361
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GNF AI EV+RL+PNLPE YN G A S LG++K A + Y A +L+PK +
Sbjct: 60 GNFSAAIKDFTEVIRLNPNLPEAYNNRGNARSKLGDNKGAIEDYNQAINLNPKSEQAYYN 119
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QA+ P + E+ D+ A + Q +L P
Sbjct: 120 RGKARSELGDNKGAIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLNP 179
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+A + G T + L + + P+ A+
Sbjct: 180 KMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNSAE 217
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+++ G+ A L + L PN E YN G+ ++ +G+++ AF + A L P+
Sbjct: 189 GNVRTTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQ 248
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + GD A A+ + QA+R +PK + + E+G++ +A + Y+
Sbjct: 249 LGLAYNNRGVMRREFGDHAGAIQDLNQALRFDPKLAKAYNNRGDTHRELGNHREAIQDYD 308
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
Q +L PDN + + + G G +E+Y + D L ++D
Sbjct: 309 QAVRLIPDNPNIYYYRGVVRTQLGDFQ---GAIEDYHQAVTIDPKLFILD 355
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + + L+PN E YN G++ L +H A A L+PK + +
Sbjct: 128 GDNKGAIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLNPKMAEAYSN 187
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GDT A + AI +P + Y +GDY+KA + + Q L P
Sbjct: 188 RGNVRTTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDP 247
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
A + + G A +I L + L+ P
Sbjct: 248 QLGLAYNNRGVMRREFGDHAGAIQDLNQALRFDP 281
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Query: 30 LSPGVTKMLGEASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
L P + + YA G++++A + + L P L YN G+ G+H A
Sbjct: 211 LDPNSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLAYNNRGVMRREFGDHAGAI 270
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
A PK + + + G+ +A+ QA+R P + ++ + +
Sbjct: 271 QDLNQALRFDPKLAKAYNNRGDTHRELGNHREAIQDYDQAVRLIPDNPNIYYYRGVVRTQ 330
Query: 149 IGDYEKAAESYEQIQKLFP 167
+GD++ A E Y Q + P
Sbjct: 331 LGDFQGAIEDYHQAVTIDP 349
>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Trigonal Crystal Form)
gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Orthorombic Crystal Form)
Length = 136
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 65/120 (54%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI ++ + L P E + LG A+ G++ A ++Y A L P+ + W
Sbjct: 15 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYN 74
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++GD +A+ Y ++A+ +P+ +L + Y + GDY++A E Y++ +L P
Sbjct: 75 LGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 134
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 67/133 (50%)
Query: 69 ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA 128
E + LG A+ G++ A ++Y A L P+ + W L ++GD +A+ Y ++A
Sbjct: 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKA 61
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
+ +P+ +L + Y + GDY++A E Y++ +L P + +A + K G
Sbjct: 62 LELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDE 121
Query: 189 SIGILEEYLKVHP 201
+I ++ L++ P
Sbjct: 122 AIEYYQKALELDP 134
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI ++ + L P E + LG A+ G++ A ++Y A L P+ + W
Sbjct: 49 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYN 108
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPK 134
L ++GD +A+ Y ++A+ +P+
Sbjct: 109 LGNAYYKQGDYDEAIEYYQKALELDPR 135
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%)
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W L ++GD +A+ Y ++A+ +P+ +L + Y + GDY++A E Y++ +
Sbjct: 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P + +A + K G +I ++ L++ P A+
Sbjct: 64 LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 104
>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 440
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI E +RL P + G++ + G + A + Y A L P D+A+W
Sbjct: 174 GKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGN 233
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+G +A+ +AIR +P D ++ + V+ G Y++A E+Y++ +L P
Sbjct: 234 KGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDP 293
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
N A G+ +I +E +++ P+DA
Sbjct: 294 ANAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDA 330
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 9/206 (4%)
Query: 29 KLSPGVTKMLGEASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P G + A G +++AI E +RL P + G++ + G H A
Sbjct: 188 RLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDEA 247
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ Y A L P D+A+W V +G +A+ +AIR +P + + +
Sbjct: 248 IEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGVSLA 307
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+ G Y++A E+Y++ +L P + A K + SI +E ++++P
Sbjct: 308 DQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYDEAIRLNP------ 361
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQ 233
DL + + N+ + +H E Q
Sbjct: 362 --DLAEPWIGKGNSLDDQGKHDEAIQ 385
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 34/191 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI E +RL P + ++ G+A + G H A + Y A L P D+A W
Sbjct: 38 GKYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEAIRLDPTDAAAWGN 97
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKD---------------------------ISLRI 140
+G +A+ +AIR +P D I L
Sbjct: 98 KGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNP 157
Query: 141 HLASFYV-------EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
LA ++ + G Y++A E+Y++ +L P NV A G+ +I
Sbjct: 158 VLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAY 217
Query: 194 EEYLKVHPSDA 204
+E +++ P+DA
Sbjct: 218 DEAIRLDPTDA 228
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 71/155 (45%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
++++I E + L+P L E + G + + G + A + Y A L P + A W
Sbjct: 142 YDESIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKG 201
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+G +A+ +AIR +P D ++ + + G +++A E+Y++ +L P +
Sbjct: 202 VSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTD 261
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ G+ +I +E +++ P++A
Sbjct: 262 AAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANA 296
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 92/239 (38%), Gaps = 37/239 (15%)
Query: 29 KLSPGVTKMLGEASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P + + +A G ++AI E +RL P + G + + G + A
Sbjct: 52 RLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEAIRLDPTDAAAWGNKGASLADQGKYDEA 111
Query: 88 FDFYVIAAHLSPKDSALW--------KQ-------------------LLTFAVQKGDT-- 118
+ Y A L P D+ W KQ L + KG +
Sbjct: 112 IEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWIGKGKSLA 171
Query: 119 -----AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
+A+ +AIR +P +++ + + G Y++A E+Y++ +L P +
Sbjct: 172 DQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVW 231
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
G+ +I +E +++ P+DA +V L++ Y++ ++ + A
Sbjct: 232 GNKGVSLADQGKHDEAIEAYDEAIRLDPTDA--AVWGNKGVSLVDQGKYDEAIEAYDEA 288
>gi|256072232|ref|XP_002572440.1| o-linked n-acetylglucosamine transferase ogt [Schistosoma mansoni]
Length = 852
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 157/394 (39%), Gaps = 41/394 (10%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
K RG + +L + + LGEA FE A + +++ +P + Y L
Sbjct: 126 KLRGPLISKRARLPIELAQYLGEAERHLNNDEFEHAERICYQIIDTAPQASQPYIVLAEI 185
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
GN + A +F AA +P D W L+ +A + D A++Y RQA+R D S
Sbjct: 186 SFRRGNQEKAKEFLYQAAQRNPSDQNTWLTLMDWAEEAEDFPLAIHYARQALRRNRADTS 245
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV-----DATKTGAQLFLKCGQTARSIGI 192
LR L G +A + + P++ + + A F K S+
Sbjct: 246 LRQRLIDLCHVAGRSREALQLRLAALSVTPESTGEEQFEVARELADQFFKLLDPHNSVKA 305
Query: 193 LEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH--------------------- 231
E + +P + + ++I+++ Y++ L+
Sbjct: 306 YENAFEQYPDHGTDNDRNSALSIMLQMKRYDQALKFFTSFCGVKLYLNSGDLFDMDRHSS 365
Query: 232 --AQIVRFSGKELP------LKLKVKAGICYLRLGNM--EKAEILFADLQWKNAIDHADL 281
+ + +F E P L+LK+ + +L LG + + E + + +N ++D
Sbjct: 366 KLSSVEKFKRCEFPDNMAVELQLKLFLILAHLGLGPLVVSRVESTYTN---ENITKYSDW 422
Query: 282 ITEVADTLMSLGHSNSALKYYHFL-ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
+ ++ + A++ L ++N ++ LAECYL E AI +
Sbjct: 423 LLDIVVAYKEKNLYSIAIQLILKLKKSNVTCKLVQVWTLLAECYLEAGETESAIKAYRHV 482
Query: 341 LDRFE-DNIDARLTLASLLLEEAKEEEAITLLSP 373
++ + + DARL L +LL + +EA+ L+P
Sbjct: 483 IENLDPRHTDARLGLVNLLRRLGRNQEALKFLNP 516
>gi|416379909|ref|ZP_11683991.1| Tetratricopeptide TPR_2 repeat protein [Crocosphaera watsonii WH
0003]
gi|357265765|gb|EHJ14485.1| Tetratricopeptide TPR_2 repeat protein [Crocosphaera watsonii WH
0003]
Length = 362
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++++AI++ ++ L + + ++ +G HS GNH +A +Y A L + + L
Sbjct: 56 DYQRAIAIYQQAASLDTDNAKIFSGIGYLHSKQGNHSAAVKYYQKALSLDSSNPNFYYAL 115
Query: 109 LTFAVQKGDT---AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
GD A A YY AI+ PK + I L + DYE AAE+Y+++ L
Sbjct: 116 GDSLANVGDNNNAASAYYY---AIQLNPKFVKSYIGLGVVLLRQEDYEGAAEAYKRVIAL 172
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P+N +A L+ Q +++ L ++ P D DL + LL ++ E
Sbjct: 173 DPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVQRFPRDVDLRL--LLATAYLQQGQLELG 230
Query: 226 LQHIEHAQIVRFSGKELPLKLKV 248
+H++ A+ R + + ++LK+
Sbjct: 231 KEHLKRAE--RVDPRNIKVQLKI 251
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 62/123 (50%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ A S ++L+P ++Y LG+ +++ A + Y L P + +
Sbjct: 123 GDNNNAASAYYYAIQLNPKFVKSYIGLGVVLLRQEDYEGAAEAYKRVIALDPNNPEAFAI 182
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + +Q+ QA+ Y+ A++ P+D+ LR+ LA+ Y++ G E E ++ +++ P
Sbjct: 183 MGSSLLQQKQLDQALQYLGNAVQRFPRDVDLRLLLATAYLQQGQLELGKEHLKRAERVDP 242
Query: 168 DNV 170
N+
Sbjct: 243 RNI 245
>gi|359484435|ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
vinifera]
gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera]
Length = 1091
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 149/366 (40%), Gaps = 58/366 (15%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGL----AHSALGNHKS------AFD----- 89
Y G FE+A + V++L P E LG+ + A G K AF+
Sbjct: 208 YKLGQFEKARKAFQRVLQLDPENVEALVALGIMDLHTNDASGIRKGMEKMQRAFEIYPYC 267
Query: 90 ----------FYVIAAHL---------------SPKDSALWKQLLTFAVQKGDTAQAMYY 124
F+ H P S + L KGD +A Y
Sbjct: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
Query: 125 IRQAIRA--EPKDISLRIH-LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
+++ +P D L + L +++GD+ + ++E++ +++P+N +A K +++
Sbjct: 328 YMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPENCEALKALGHIYV 387
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQ-IVRFSGK 240
+ GQT ++ L + K+ P DA + +DL ++ + L + A+ +++ G+
Sbjct: 388 QLGQTEKAQEYLRKATKIDPRDAQ-AFLDLGELLITSDTG--AALDAFKTARGLLKKGGE 444
Query: 241 ELPLKLKVKAGICYLRLGNMEKAEILF----ADLQWKNAIDHADLITEVADTLMSLGHSN 296
E+P++L G+ Y G E AE F D W + ID D A+ + H
Sbjct: 445 EVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIWLSFID--DKAYSYANDARTSMHHF 502
Query: 297 SALKYYHFLETNAGT-----DNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDAR 351
++ +H LE + + + LA L A + + L +F D IDA
Sbjct: 503 KDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNNTKTASILYRLILFKFPDYIDAY 562
Query: 352 LTLASL 357
L LA++
Sbjct: 563 LRLAAI 568
>gi|353236156|emb|CCA68156.1| hypothetical protein PIIN_02022 [Piriformospora indica DSM 11827]
Length = 1072
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 9 YRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLP 68
++ R+ + K G+ G K LS G+A+ + G ++A+ L +EV+R+ P
Sbjct: 122 FKDDVRQASGKPGQSTGPK--LSAEAQTTFGDANFAFVSGQTQEAVQLFQEVIRMEPRHR 179
Query: 69 ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA 128
+++ L + LG A ++ AHL D+ W QL + +KG QA+Y R+A
Sbjct: 180 PSWSALASCYEQLGEPNKALQVDIMGAHLK-ADAEHWFQLGQKSREKGLAQQALYCFRKA 238
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ I AS E G ++A + ++I K P+N+
Sbjct: 239 CKMIGNPIQSYWEYASLAKEFGHLDEALSALKKILKRQPNNI 280
>gi|67594909|ref|XP_665944.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656820|gb|EAL35711.1| hypothetical protein Chro.50256 [Cryptosporidium hominis]
Length = 933
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 146/331 (44%), Gaps = 58/331 (17%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSP 65
Y RK+ R+L+ ++ + S+ +S + K+L A+ Y F AI +L+E+V +P
Sbjct: 75 YSNERKRKRELSHRK--KTKSQQNISTEIEKLLQRANDAYLEKKFILAIEILEEIVVKAP 132
Query: 66 NLPETYNTLGLAH-SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYY 124
L + ++ LGL + L + + A FY++AAHL D LW+++ + + D +A+Y
Sbjct: 133 GLHDPFHMLGLIYEQELDDKEKAIGFYLVAAHLVSTDFFLWRRIGQMSAEIQDWNRAIYC 192
Query: 125 IRQAIR--------------AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF---P 167
+ I+ A+ +D +R L++ Y + D + +Q++ LF P
Sbjct: 193 YSKCIKNIEYSENLGGQESAAQLED-EIRFELSNAYYSVNDINRCI---QQLKILFWRHP 248
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ K A+ + K G+ + + LE V D D++++++L + ++ Y+K +
Sbjct: 249 GDPLLGKELARCYHKIGKLSLAAETLESC--VDYCD-DINIVNMLCEVYIDLKLYQKCVD 305
Query: 228 HIEH----------------AQIVRFSGKEL---------PLKLKVKAGICYLRLGNMEK 262
I + Q R + E+ P+ + K + L GN
Sbjct: 306 LIHNYFGKMNTKSNDFNSIFNQPTRHNTNEIIDNQFLKNVPIDIATKYAVANLNFGNYTP 365
Query: 263 AEILFADLQWKNAIDHADLITEVADTLMSLG 293
A LQ I+ + + + D ++LG
Sbjct: 366 A------LQVSKIINEYNSLEDFIDLHLTLG 390
>gi|302309024|ref|NP_986211.2| AFR663Wp [Ashbya gossypii ATCC 10895]
gi|299790908|gb|AAS54035.2| AFR663Wp [Ashbya gossypii ATCC 10895]
gi|374109444|gb|AEY98350.1| FAFR663Wp [Ashbya gossypii FDAG1]
Length = 1038
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
+ +G K + + P V ++L EA+ + + + A L EV++ Y TLG
Sbjct: 110 RGQGLSKLRQRAIDPEVAQLLSEANEAFVRNDIQVAEQLYNEVIKKDAKNFAAYKTLGDI 169
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
+ G + + + +AAHL+P D WK + T + + QA+Y +AI P++
Sbjct: 170 YHLQGRYNDCCNSWFLAAHLNPSDWEFWKMVATLSSELKHIRQAVYCYSRAISMNPQEWE 229
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
A Y + G ++ E ++++ K P + + + A L+++ G+ +I + Y+
Sbjct: 230 CIYSRAMLYKDTGQLGRSLEGFQRLYKHSPYDSNILRELAVLYVEYGRVQDAIML---YM 286
Query: 198 KVHPSDA 204
KV ++
Sbjct: 287 KVFENNV 293
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEIL--FADLQWKNAIDHADLITEVADTLMSLGHSNSAL 299
LP+ ++V+ G+ LRL N E + F L +N D ADL EVA L + A+
Sbjct: 428 LPIDIRVRLGL--LRLNNKHIIEAMNQFQFLYSENFADIADLYFEVAVNLTKMDKFQEAI 485
Query: 300 KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
+++ L LY L++CY +++ +A F K ++ ++++ +LTLA +
Sbjct: 486 EFFVPLLEIPEYQTPDLYKPLSKCYREVEDYENAKEIFTKLVELMPEDLETKLTLAEI 543
>gi|409042526|gb|EKM52010.1| hypothetical protein PHACADRAFT_150922 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1022
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 11 KKTRKLNKKRGRRKGSKNK--LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLP 68
++ + KKRGR+ G + LSP V ++G+ + G FE +++EV+R+ P P
Sbjct: 101 REASGVGKKRGRKPGRRKGIVLSPDVEVLIGQGHQAFIDGKFEDTTRIMQEVIRIEPRDP 160
Query: 69 ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA 128
++ L + A ++AAHL+ +++ W+QL + ++G QA+Y R+
Sbjct: 161 RAWSVLAQCCEIKEESRKALQLRIMAAHLN-QEAEEWEQLAKQSRREGYHQQALYCYRKL 219
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ +P +++ A+ ++G+ A S I K P ++
Sbjct: 220 HQLDPDNLNALWDRATLAKQLGEPRTARVSLLAILKRIPHDL 261
>gi|110597763|ref|ZP_01386047.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
13031]
gi|110340670|gb|EAT59150.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
13031]
Length = 537
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 11/246 (4%)
Query: 29 KLSPGVTKMLGEASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
K PG + G L +AY G +I E +R P+ + + LG+A+ G +
Sbjct: 276 KQMPGSGEAWG--YLGFAYLQRGELSLSIDAYTEAIRRRPDYAQYWVDLGVAYGREGQKQ 333
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+ Y A L+ + + W L VQ G+T +A+ +QA+R P+D S L
Sbjct: 334 KKIEAYRQAVRLNSEYAVGWFNLAMAYVQNGETDKAIAAYQQAVRITPRDASAWYRLGLV 393
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ + G ++KA ++Y Q ++ P+N + + A+ + Q + + + L+++P D
Sbjct: 394 FSDGGQFDKAVKAYLQAVRITPENANYLLSLARAYGHAAQPSEAYEAYKSALRINPDYTD 453
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
V + I EN+ ++ H + + +R + + G YL G++EK
Sbjct: 454 AWV---YLGISYENDHRKEEALH-AYTEALRINPDHNTALFNL--GRFYLETGSVEKGMA 507
Query: 266 LFADLQ 271
++ L+
Sbjct: 508 VYGRLK 513
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%)
Query: 54 ISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
I K ++ P E + LG A+ G + D Y A P + W L
Sbjct: 268 ILFCKNWIKQMPGSGEAWGYLGFAYLQRGELSLSIDAYTEAIRRRPDYAQYWVDLGVAYG 327
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
++G + + RQA+R + +LA YV+ G+ +KA +Y+Q ++ P + A
Sbjct: 328 REGQKQKKIEAYRQAVRLNSEYAVGWFNLAMAYVQNGETDKAIAAYQQAVRITPRDASAW 387
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+F GQ +++ + +++ P +A+
Sbjct: 388 YRLGLVFSDGGQFDKAVKAYLQAVRITPENAN 419
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 38 LGEASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
+G +L AY G ++AI+ ++ VR++P + LGL S G A Y+ A
Sbjct: 351 VGWFNLAMAYVQNGETDKAIAAYQQAVRITPRDASAWYRLGLVFSDGGQFDKAVKAYLQA 410
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQ---AMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
++P+++ LL+ A G AQ A + A+R P ++L Y
Sbjct: 411 VRITPENA---NYLLSLARAYGHAAQPSEAYEAYKSALRINPDYTDAWVYLGISYENDHR 467
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
E+A +Y + ++ PD+ A + +L+ G + + + ++P A L
Sbjct: 468 KEEALHAYTEALRINPDHNTALFNLGRFYLETGSVEKGMAVYGRLKHLNPEMAQL 522
>gi|149245347|ref|XP_001527177.1| hypothetical protein LELG_02006 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449571|gb|EDK43827.1| hypothetical protein LELG_02006 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1089
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 165/400 (41%), Gaps = 53/400 (13%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+L P V +L +A+ + + + A+ L +V++ Y +G H LGN
Sbjct: 200 ELDPEVRMLLSQANEAFVRNDLQVALGLYTDVIKKDARNFHAYKAIGEIHKNLGNLNECC 259
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI-HLASFYV 147
+F+V+AA+L D W Q+ + G QA++ +AI ++ K S I A Y
Sbjct: 260 NFWVLAANLHSWDHEFWSQVAELSADLGHIDQAIFCYGRAITSDIKKSSRFIMQRAILYK 319
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL---------- 197
E + KA + ++++ ++P N + K A ++ + + +I + + L
Sbjct: 320 EKHQFGKALDGLQKVRLVYPTNPEVYKHIASVYSEQRRLNDAINLYMKMLDWNINEDINS 379
Query: 198 -KVHPSDADLSVIDLLVAILMENNAYEKTLQHI--------EHAQIV------------- 235
+V+P D S +++L+ + +++ ++ L + + +Q V
Sbjct: 380 AEVYPK-FDWSELNILLELHIQHRSFRNGLTVLKLTARWIQDRSQEVWDDQDDSEFDVKR 438
Query: 236 RFSGK----------------ELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHA 279
RF ELP+ ++ K G+ L G+ E+A F L ++ +
Sbjct: 439 RFKNSHKLLAVARQAFNTKRFELPIDIRFKLGVLRLGAGDNEEALHHFEYLLDEDPSSIS 498
Query: 280 DLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYK 339
DL E L +G AL Y +E + L L +CY+ + A +
Sbjct: 499 DLYFEAGKHLEDVGLYEEALLYLTRVEDEPSPE---LVRLLGKCYIEGGDFLQAKYAYED 555
Query: 340 ALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDS 379
L +N D +L+LA L +E A L++ + +S
Sbjct: 556 LLSLEPENADYKLSLAETLYHLGEETRAEHLINEVQRANS 595
>gi|67920836|ref|ZP_00514355.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67856953|gb|EAM52193.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 380
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++++AI++ ++ L + + ++ +G HS GNH +A +Y A L + + L
Sbjct: 74 DYQRAIAIYQQAASLDTDNAKIFSGIGYLHSKQGNHSAAVKYYQKALSLDSSNPNFYYAL 133
Query: 109 LTFAVQKGDT---AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
GD A A YY AI+ PK + I L + DYE AAE+Y+++ L
Sbjct: 134 GDSLANVGDNNNAASAYYY---AIQLNPKFVKSYIGLGVVLLRQEDYEGAAEAYKRVIAL 190
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P+N +A L+ Q +++ L ++ P D DL + LL ++ E
Sbjct: 191 DPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVQRFPRDVDLRL--LLATAYLQQGQLELG 248
Query: 226 LQHIEHAQIVRFSGKELPLKLKV 248
+H++ A+ R + + ++LK+
Sbjct: 249 KEHLKRAE--RVDPRNIKVQLKI 269
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 62/123 (50%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ A S ++L+P ++Y LG+ +++ A + Y L P + +
Sbjct: 141 GDNNNAASAYYYAIQLNPKFVKSYIGLGVVLLRQEDYEGAAEAYKRVIALDPNNPEAFAI 200
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + +Q+ QA+ Y+ A++ P+D+ LR+ LA+ Y++ G E E ++ +++ P
Sbjct: 201 MGSSLLQQKQLDQALQYLGNAVQRFPRDVDLRLLLATAYLQQGQLELGKEHLKRAERVDP 260
Query: 168 DNV 170
N+
Sbjct: 261 RNI 263
>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
Length = 609
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 29 KLSPG-VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P V + + S Y GN+ +AI E +RL P+ T+ G A S LGN+
Sbjct: 323 RLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEG 382
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y A L P+++ +W +G +A+ +AIR +P++ + + + +
Sbjct: 383 ILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFR 442
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
G Y++A ++Y++ +L P+ D + F G+ +I +E +++ P
Sbjct: 443 MQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDP 496
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI E +RL PN + + G A GN+ A Y A L P ++ W
Sbjct: 309 GKYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYN 368
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G+ + + +AIR +P++ + + + + G Y++A ++Y++ +L P
Sbjct: 369 KGNALSELGNYTEGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDP 428
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
+ D + F G+ +I +E +++ P +AD+ V
Sbjct: 429 EEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWV 469
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y GN+ +A+ E +RL P +N GLA GN+ + Y A L P+ +A
Sbjct: 34 YYRGNYTEAVQAYDEAIRLDPEYASAWNNKGLALDYQGNYDESIKAYDEAIRLDPEFAAA 93
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W +G+ +A +AIR +P+ + E G+Y A +Y++ +
Sbjct: 94 WNNKGIALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIR 153
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
L P+ A + G +I +E +++ P DA + + VA+ M+ N
Sbjct: 154 LDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDA-TTWYNKGVALGMQGN 208
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI L + + L P +N G GN+ A + A L P+ + W
Sbjct: 241 GKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSN 300
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T +G +A+ +AIR P + I+ S E G+Y +A ++Y++ +L P
Sbjct: 301 KGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDP 360
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
DN + G I +E +++ P +AD+ V
Sbjct: 361 DNAMTWYNKGNALSELGNYTEGILAYDEAIRLDPEEADVWV 401
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ +AI E +RL P L ++ G + G + A Y A L P W
Sbjct: 275 GNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWIN 334
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ ++G+ +A+ +AIR +P + + + E+G+Y + +Y++ +L P
Sbjct: 335 KGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDEAIRLDP 394
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
+ D + F G+ +I +E +++ P +AD+ V
Sbjct: 395 EEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWV 435
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ AI E +RL P L ++ G A GN+ A + A L P+D+ W
Sbjct: 139 GNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYN 198
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+G+ A+A+ +AIR +P+D + + E+G Y++A + ++ +L P
Sbjct: 199 KGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDP 258
Query: 168 -DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA------ILMENN 220
D G L++K G +I +E +++ P +L VA +L +
Sbjct: 259 EDAAPWNNKGKPLWMK-GNYTEAIQAFDEAIRLDP--------ELAVAWSNKGTVLADQG 309
Query: 221 AYEKTLQHIEHA 232
Y++ +Q + A
Sbjct: 310 KYDEAIQAYDEA 321
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 5/183 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI E +RL P + + + G + G + A Y A L P+++ +W
Sbjct: 411 GKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVS 470
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+G +A+ +AIR +P+ + + E Y++A ++Y++ +L P
Sbjct: 471 KGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGNALYEQDKYDEAIQAYDEAIRLNP 530
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA-----DLSVIDLLVAILMENNAY 222
D +A + G+ +I +E +++ P A V++ L + N AY
Sbjct: 531 DYKEAWNNKGNALVMQGKYDEAIQAYDEAIRLDPEFAYPWFSKGVVLEYLGKVAEANEAY 590
Query: 223 EKT 225
K
Sbjct: 591 AKA 593
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 70/155 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ + I E +RL P + + + G + G + A Y A L P+++ +W
Sbjct: 377 GNYTEGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVS 436
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+G +A+ +AIR +P++ + + + + G Y++A ++Y++ +L P
Sbjct: 437 KGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDP 496
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ A + + +I +E ++++P
Sbjct: 497 EFAGAWYNKGNALYEQDKYDEAIQAYDEAIRLNPD 531
>gi|451982583|ref|ZP_21930892.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
gi|451760229|emb|CCQ92187.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
Length = 395
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A + L+ RL+PN+ ++ LG + AL + AF Y +A L P++
Sbjct: 161 GEKTKAANQLRIASRLAPNVARVHSNLGALYEALNMDEDAFQKYNLALRLDPEEPIAHYN 220
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++G+ A+ ++ +A R P D ++RI L + ++ Y+KA E YE + P
Sbjct: 221 LGAYYARRGNKLLALGHMHEAQRLNPSDATIRIGLGRAFADLRKYDKALEHYEASLRYRP 280
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
N D A+L+ Q +++ E + + P
Sbjct: 281 GNADTYLEMAELYHLNQQAEKAVESYELAISLDP 314
>gi|414585833|tpg|DAA36404.1| TPA: hypothetical protein ZEAMMB73_637393 [Zea mays]
Length = 892
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 172/389 (44%), Gaps = 68/389 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH----------L 97
G + + +K+ + P Y TL L H L NH ++ H L
Sbjct: 85 GGIRRGMEKMKKAFEIYP-----YYTLALNH--LANH-----YFFTGQHFVVEQLTETAL 132
Query: 98 SPKDSALWKQLLTFAV-----QKGDTAQAMYYIRQAIR--AEPKDISL-RIHLASFYVEI 149
S + L K + + KGD A Y ++ ++P+D L I L ++
Sbjct: 133 SSSNHGLLKSHAYYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLGQIQLKF 192
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
GD++ + S+E++ ++ P+N ++ K + K G+T ++I ++ ++ P D V
Sbjct: 193 GDFKSSLGSFEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKDHQAFV- 251
Query: 210 DLLVAILMENNAYEKTLQHIEHAQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF- 267
L +L+E++ + +++++ A+ +++ +G+ +P++L G+ + G E AE F
Sbjct: 252 -ELGELLVESD-WAAAMEYLKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQSFK 309
Query: 268 ---ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLE-------TNAGTDNGYLY 317
D W + +D +V ++++ N ++H LE +N T + Y
Sbjct: 310 EALGDGLWVSIMD-----GKVGSSMINWSVQNKDQSFFHQLEGVPLELHSNKVT-TLFNY 363
Query: 318 LKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDL 377
+L E L + A +F+ + ++ D IDA L LA++ + + +I L+ +
Sbjct: 364 ARLLE---ELHDSVRASIFYRFIIFKYPDYIDAYLRLAAIAKQRNNVQLSIELIGDALKI 420
Query: 378 D-----------SLDMNSDKSNPWWLNEK 395
D SL++ SD++ WL K
Sbjct: 421 DEKNPNALSMLGSLELQSDEA---WLTAK 446
>gi|54295320|ref|YP_127735.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens]
gi|53755152|emb|CAH16645.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens]
Length = 577
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 160/357 (44%), Gaps = 32/357 (8%)
Query: 30 LSPGVTKMLGEA-SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
++ V + +A LQY G+ QAISL ++++ SP ET + LGL ++ LG+ ++A
Sbjct: 1 MNSEVDTLFAQAYKLQYE-GHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMENAI 59
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+++ A ++P D + L + G +A+ Y +QAI +P+ + +LA+ Y
Sbjct: 60 LYFLQARKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYAL 119
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--- 205
+ +Y+KA Y PD A L LK Q + + + ++P +
Sbjct: 120 LNNYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQF 179
Query: 206 -LSVIDLLVAILME-NNAYEKTL-QHIEHAQIVRFSG----KELPLKLKVKAGICYLRLG 258
L ++ L +L E A++K L Q EH Q + G K +L V L L
Sbjct: 180 YLGILHLEDNLLSEAEQAFQKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239
Query: 259 NME-------KAEILFADLQWKNAIDHAD-LITEVADTL----------MSLGHSNSALK 300
N + A + D +++NA+ H D L+ + D L M+LGH N A
Sbjct: 240 NEDIDARNNLAATFMHHD-RFENALMHYDVLLKKEPDNLEYLYNSGVAQMALGHLNEATL 298
Query: 301 YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
+ + T +D+ LA YL + R A + +AL D++ +R L ++
Sbjct: 299 LFDQILT-LQSDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDVVSRHMLNAI 354
>gi|325187990|emb|CCA22532.1| predicted protein putative [Albugo laibachii Nc14]
Length = 968
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+LG A Q GNF ++I ++ +RL P E Y LG A G+ A FYV A
Sbjct: 77 LLGAAHFQS--GNFAESIYYNQQCIRLDPQFAEAYGNLGNALKETGDIVGAIHFYVKAIQ 134
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L P+ S + L +Q G QA+ + A+ +P + +L + Y G YE A
Sbjct: 135 LHPRFSDAYNNLAVSYMQIGQWQQAIETYKTALTLDPSLVDAHSNLGNLYKAQGMYEDAK 194
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P A A ++ GQ +I +E +++ P D
Sbjct: 195 SCFTDAIRVKPTFAIAWSNLAGVYQHSGQLDAAIIHYQEAIRLAPDFVD 243
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +Q+I + +RL + P YN LG A G K A Y AA L P +A +
Sbjct: 324 GQLDQSILCYRTALRLKSDHPHAYNNLGNALKDKGMIKEAIHCYSTAARLMPHLAAAYSN 383
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++G QA+ + +QAI +P+ ++ + + ++ + + + Y +L P
Sbjct: 384 LGSVLKEQGKLEQALAHYQQAITIDPRFADAFSNMGNVFKDMNRLDDSIQCYTTAIRLKP 443
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ DA A + GQ +I + L + P+ D
Sbjct: 444 EFTDAYSNLASAYKDGGQLREAIACYRKALFLRPNFPD 481
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
+T +L A Y G +++ ISL + + + LG AH GN + +
Sbjct: 37 AITDILNLAHQHYLNGYYQETISLCEYLYEVDMYHTNNLLLLGAAHFQSGNFAESIYYNQ 96
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
L P+ + + L + GD A+++ +AI+ P+ +LA Y++IG +
Sbjct: 97 QCIRLDPQFAEAYGNLGNALKETGDIVGAIHFYVKAIQLHPRFSDAYNNLAVSYMQIGQW 156
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
++A E+Y+ L P VDA L+ G + + ++V P+ A
Sbjct: 157 QQAIETYKTALTLDPSLVDAHSNLGNLYKAQGMYEDAKSCFTDAIRVKPTFA 208
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++QAI K + L P+L + ++ LG + A G ++ A + A + P + W
Sbjct: 154 GQWQQAIETYKTALTLDPSLVDAHSNLGNLYKAQGMYEDAKSCFTDAIRVKPTFAIAWSN 213
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G A+ + ++AIR P + +L + E G + + Y++ ++ P
Sbjct: 214 LAGVYQHSGQLDAAIIHYQEAIRLAPDFVDAYTNLGNALRESGRLQDSINVYKKAIRIRP 273
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
D A A + GQ +I + + + P+ D
Sbjct: 274 DFATAHGNLASAYYDSGQMDLAILTFRQAILLEPNFPD 311
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + AI +E +RL+P+ + Y LG A G + + + Y A + P +
Sbjct: 222 GQLDAAIIHYQEAIRLAPDFVDAYTNLGNALRESGRLQDSINVYKKAIRIRPDFATAHGN 281
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + G A+ RQAI EP +L + E+G +++ Y +L
Sbjct: 282 LASAYYDSGQMDLAILTFRQAILLEPNFPDAYNNLGNALREMGQLDQSILCYRTALRLKS 341
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-----SVIDLLVAILMENNAY 222
D+ A + G + G+++E + + + A L + L ++L E
Sbjct: 342 DHPHA-------YNNLGNALKDKGMIKEAIHCYSTAARLMPHLAAAYSNLGSVLKEQGKL 394
Query: 223 EKTLQHIEHAQIV--RFS 238
E+ L H + A + RF+
Sbjct: 395 EQALAHYQQAITIDPRFA 412
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+L A G +E A S + +R+ P ++ L + G +A Y A L+P
Sbjct: 181 GNLYKAQGMYEDAKSCFTDAIRVKPTFAIAWSNLAGVYQHSGQLDAAIIHYQEAIRLAPD 240
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L + G ++ ++AIR P + +LAS Y + G + A ++
Sbjct: 241 FVDAYTNLGNALRESGRLQDSINVYKKAIRIRPDFATAHGNLASAYYDSGQMDLAILTFR 300
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
Q L P+ DA + GQ +SI
Sbjct: 301 QAILLEPNFPDAYNNLGNALREMGQLDQSI 330
>gi|414585831|tpg|DAA36402.1| TPA: hypothetical protein ZEAMMB73_637393 [Zea mays]
Length = 1065
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 172/389 (44%), Gaps = 68/389 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH----------L 97
G + + +K+ + P Y TL L H L NH ++ H L
Sbjct: 258 GGIRRGMEKMKKAFEIYP-----YYTLALNH--LANH-----YFFTGQHFVVEQLTETAL 305
Query: 98 SPKDSALWKQLLTFAV-----QKGDTAQAMYYIRQAIR--AEPKDISL-RIHLASFYVEI 149
S + L K + + KGD A Y ++ ++P+D L I L ++
Sbjct: 306 SSSNHGLLKSHAYYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLGQIQLKF 365
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
GD++ + S+E++ ++ P+N ++ K + K G+T ++I ++ ++ P D V
Sbjct: 366 GDFKSSLGSFEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKDHQAFV- 424
Query: 210 DLLVAILMENNAYEKTLQHIEHAQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF- 267
L +L+E++ + +++++ A+ +++ +G+ +P++L G+ + G E AE F
Sbjct: 425 -ELGELLVESD-WAAAMEYLKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQSFK 482
Query: 268 ---ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLE-------TNAGTDNGYLY 317
D W + +D +V ++++ N ++H LE +N T + Y
Sbjct: 483 EALGDGLWVSIMD-----GKVGSSMINWSVQNKDQSFFHQLEGVPLELHSNKVT-TLFNY 536
Query: 318 LKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDL 377
+L E L + A +F+ + ++ D IDA L LA++ + + +I L+ +
Sbjct: 537 ARLLE---ELHDSVRASIFYRFIIFKYPDYIDAYLRLAAIAKQRNNVQLSIELIGDALKI 593
Query: 378 D-----------SLDMNSDKSNPWWLNEK 395
D SL++ SD++ WL K
Sbjct: 594 DEKNPNALSMLGSLELQSDEA---WLTAK 619
>gi|427731479|ref|YP_007077716.1| hypothetical protein Nos7524_4360 [Nostoc sp. PCC 7524]
gi|427367398|gb|AFY50119.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 379
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A+ E +R++PNL E Y LGLA G ++A Y A + P +A L
Sbjct: 113 AVQEYGEAIRINPNLGEAYYNLGLALQRQGQKEAAITAYRQALVIDPTRTAAHYNLGLVL 172
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
++G +A+ +QA +P + + +LA E G E+A +Y+Q+ KL P N A
Sbjct: 173 YEQGQLPEAIAAYQQATNFDPSNANAYYNLAIALQESGKMEEAIVAYQQVLKLDPKNAAA 232
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
L GQTA +I + + ++ P +A
Sbjct: 233 YSNLGSLMALQGQTAEAIAVYTQAVRQDPKNA 264
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +AI+ ++ P+ Y L +A G + A Y L PK++A
Sbjct: 173 YEQGQLPEAIAAYQQATNFDPSNANAYYNLAIALQESGKMEEAIVAYQQVLKLDPKNAAA 232
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ L + +G TA+A+ QA+R +PK+ S +L GD +KA
Sbjct: 233 YSNLGSLMALQGQTAEAIAVYTQAVRQDPKNASAYYNLGVTLYNQGDLKKA 283
>gi|357441255|ref|XP_003590905.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479953|gb|AES61156.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 986
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 26/274 (9%)
Query: 7 GGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
G Y+K N R N L +LG ++ Y +F+ ++ +E +R+ P+
Sbjct: 76 GSYKKALEHSNTVYER-----NPLRTDNLLLLG--AIYYQLHDFDMCVAKNEEALRIEPH 128
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
E Y + A GN A +Y+IA L P + W L + ++KG +A R
Sbjct: 129 FAECYGNMANAWKEKGNIDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLTEAAQCCR 188
Query: 127 QAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
QA+ P + +L + G ++A Y + ++ P A A LF++ G
Sbjct: 189 QALAINPLMVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDF 248
Query: 187 ARSIGILEEYLKVHPS--DADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPL 244
R++ +E +K+ PS DA L++ ++ A+ M A + +HA L
Sbjct: 249 NRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEA----IACYQHA-----------L 293
Query: 245 KLKVKAGICYLRLGNM--EKAEILFADLQWKNAI 276
+ + G+ Y L ++ E+ ++ A L +K AI
Sbjct: 294 QTRPNYGMAYGNLASIHYEQGQLDMAILHYKQAI 327
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F +A+ KE V+L P+ P+ Y LG + ALG + A Y A P +
Sbjct: 246 GDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQHALQTRPNYGMAYGN 305
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++G A+ + +QAI +P+ + +L + ++G E+A + Y Q L P
Sbjct: 306 LASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLSLQP 365
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
++ A ++++ A + + L V
Sbjct: 366 NHPQALTNLGNIYMEWNMVAAAASYYKATLNV 397
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI + + L PN P+ LG + +A +Y +++ SA +
Sbjct: 348 GRVEEAIQCYNQCLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNN 407
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + Y EIG A + Y + + P
Sbjct: 408 LAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRP 467
Query: 168 DNVDATKTGAQLFLKCGQTARSI 190
+A A + G ++
Sbjct: 468 TMAEAHANLASAYKDSGHVEAAV 490
>gi|403356518|gb|EJY77855.1| General transcription factor 3C polypeptide 3 [Oxytricha trifallax]
Length = 1134
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 10 RKKTRKLNKKRGRR----KGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSP 65
R K + LN++R + S KL + ++G+A+ YA+ F++AI +L++++ P
Sbjct: 175 RFKNKALNQQRNQGGTGLSNSAKKLPLEIQALMGQANNLYAFEKFDEAIDILQQIITKLP 234
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
+ E+Y+T+ + + ++ + +F V+AA L D W++ + A A+Y +
Sbjct: 235 DHAESYSTIASIYEEMNEYEKSLNFGVMAAFLLKTDVERWQKCASIAKFLQKLPIAIYCL 294
Query: 126 RQAIRAEPKD-----ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG---- 176
+AI+ ++ + ++ Y DY A + +++ F D K+
Sbjct: 295 NRAIKQSSQEDVDEILRMKFEKIGIYKMQNDYSSAIRTLQKLINKFHTQ-DLRKSYMLNM 353
Query: 177 --AQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
AQ + + GQ +S +L+E ++++ +D++ +ID+L+
Sbjct: 354 ALAQTYFEQGQPQKSFEVLDELIELNQNDSNY-LIDILL 391
>gi|307153350|ref|YP_003888734.1| hypothetical protein Cyan7822_3517 [Cyanothece sp. PCC 7822]
gi|306983578|gb|ADN15459.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 367
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ +A++L ++ L+ + P+ ++ +G +S GN+++A Y A L P + +
Sbjct: 57 GNYTEALNLYQQAATLAQDNPKIFSGIGYLYSLQGNYQAAVRAYQQALTLEPSNPEFYYA 116
Query: 108 L---LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L L +A + A A YY A++ EPK++ I L + +Y+KA E Y+ +
Sbjct: 117 LGYNLAYAGDYSNAATAYYY---AMQLEPKNVKHYIGLGVVLLRQKNYDKAIEVYQWVLA 173
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
L P+N +A + L+ +T+ ++ L+ + PS +L + L A L + N
Sbjct: 174 LDPNNQEAHEIMGVALLEQKRTSEAMSFLQNATEKFPSSTELK-LQLASASLAQGN 228
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 75/158 (47%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+++AI + + V+ L PN E + +G+A A F A P + L QL
Sbjct: 160 NYDKAIEVYQWVLALDPNNQEAHEIMGVALLEQKRTSEAMSFLQNATEKFPSSTELKLQL 219
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ ++ +G+ Q + ++ R +P + +++ + + Y++A +Y + L P
Sbjct: 220 ASASLAQGNLDQGLSLLQDVQRLDPNNYKIQLKIGILLEKKERYDEALTAYRRASYLAPK 279
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+++A +++L +I + +E +V P++ D+
Sbjct: 280 SIEANAGIGRVYLAQKDYLGAIVVYKELAEVAPNNPDI 317
>gi|402217155|gb|EJT97237.1| TPR-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 1049
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 168/406 (41%), Gaps = 46/406 (11%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+ S V +L A + N ++AI + +E VR+ P E ++ L + LG+ +A
Sbjct: 155 QYSEEVRALLTSAQTAFVDQNPQEAIRIAREAVRIEPRAIEGWSVLAGVFAELGDVDAAL 214
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
F ++ AH++ +S +WK L ++ QA+Y R+ ++ P A
Sbjct: 215 KFRIMRAHMT-AESGIWKDLAAESLALDLPRQALYCYRKLLQINPHHEDAIWDRAYLLKA 273
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE---EYLKVHP---- 201
+G+ ++A + +E + +L P N + Q+ L+ +R++ + + ++ + P
Sbjct: 274 MGELDQALKGFENLLQLNPHNPNVLFQIYQVCLESSNLSRALFLYQSAFDFFRKFPPNEE 333
Query: 202 ----------SDADLSVIDLLVAI--------LMENNAYEKTLQHIEHAQ------IVR- 236
+D +SV +L AI ++N + E IE + R
Sbjct: 334 LFGIPSLSILADLQISVGNLEGAIQTVKSGARWLQNRSNESFWDLIEDDREFDPPGFTRE 393
Query: 237 -FSGKE---------LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADL---IT 283
G+E LP +L+ + I L+ GN +AEI L+ + H + +
Sbjct: 394 AVEGQEEDQPPGYHPLPFELRHRLAIARLKGGNDAEAEIHVDVLRALDRELHPEFNEYMM 453
Query: 284 EVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
E+ D G A Y + ++ + +L ++ C +L AI + L+
Sbjct: 454 EIGDVYFERGLWEEAYGAYDDVHGSSELVSRHLLTQIGRCLRNLGRLKDAIAVLEQVLEA 513
Query: 344 FEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNP 389
D+++A+L L LL + E A ++ K+ +N + P
Sbjct: 514 APDSMEAKLDLVELLEANGQLERAYDMVLEIKESRQQHVNEGEEEP 559
>gi|348687602|gb|EGZ27416.1| hypothetical protein PHYSODRAFT_553979 [Phytophthora sojae]
Length = 986
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 12/226 (5%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+L + GN ++I ++ +R++PN E Y LG A LG+ A FYV A L+P+
Sbjct: 77 GALHFQLGNLSESIFYNQQCIRVAPNFAEAYGNLGNALKELGDLAGAVQFYVRAIKLNPR 136
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L + G +A+ + AI +P+ + +L + Y G E A YE
Sbjct: 137 FGDAYNNLANCYMLLGQNNEAVETYKMAIMLDPQLVDAHSNLGNLYKVQGRVEDAKLCYE 196
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
Q + P A A L + GQ +I E +++ P AD L L E
Sbjct: 197 QAIRAKPSFAIAWSNLAGLLKEDGQLEAAIDHYREAIRLAPDFAD--AYSNLGNALKEAG 254
Query: 221 AYEKTLQHIEHAQIVRFSGKELPLKLKVKAG---ICYLRLGNMEKA 263
E+ +Q + A +R + G CY G ME A
Sbjct: 255 RVEEAIQAYKSALQIR-------PNFAIAHGNLASCYYDAGQMELA 293
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G EQA++ + ++L P+ P YN LG A G K A Y AA L P+ +A
Sbjct: 322 GQLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSN 381
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + ++G QA+ + +QAI +P ++ + + ++ E+A + Y +L P
Sbjct: 382 IGSVLKEQGKLDQALAHYQQAITIDPNFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKP 441
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
DA A + G+ +I + L + P D
Sbjct: 442 QFPDAYSNLASAYKDGGRLDDAITCYRKALALRPHFPD 479
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS Y G E AI + ++L PN P+ YN LG A G + A Y A L P
Sbjct: 281 ASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGQLEQAVTCYRTALQLKPD 340
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L KG +A++ A R P+ + ++ S E G ++A Y+
Sbjct: 341 HPHAYNNLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQ 400
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Q + P+ DA +F + +I +++ P D
Sbjct: 401 QAITIDPNFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPD 445
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 126/338 (37%), Gaps = 48/338 (14%)
Query: 35 TKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
T + A QY G +++A+ L +++ + LG H LGN + +
Sbjct: 37 TYLFNLAHQQYMGGYYQEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSESIFYNQQC 96
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
++P + + L + GD A A+ + +AI+ P+ +LA+ Y+ +G +
Sbjct: 97 IRVAPNFAEAYGNLGNALKELGDLAGAVQFYVRAIKLNPRFGDAYNNLANCYMLLGQNNE 156
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
A E+Y+ L P VDA L+ G+ + E+ ++ PS A L
Sbjct: 157 AVETYKMAIMLDPQLVDAHSNLGNLYKVQGRVEDAKLCYEQAIRAKPSFA--IAWSNLAG 214
Query: 215 ILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKN 274
+L E+ E + H A +RL
Sbjct: 215 LLKEDGQLEAAIDHYREA----------------------IRL----------------- 235
Query: 275 AIDHADLITEVADTLMSLGHSNSALKYYHF---LETNAGTDNGYLYLKLAECYLSLKERA 331
A D AD + + + L G A++ Y + N +G LA CY +
Sbjct: 236 APDFADAYSNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAHG----NLASCYYDAGQME 291
Query: 332 HAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
AI F A+ + DA L + L E + E+A+T
Sbjct: 292 LAIHTFRHAIQLEPNFPDAYNNLGNALRECGQLEQAVT 329
>gi|147781154|emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
Length = 788
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 119/256 (46%), Gaps = 18/256 (7%)
Query: 115 KGDTAQAMYYIRQAIRA--EPKDISLRIH-LASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
KGD +A Y +++ +P D L + L +++GD+ + ++E++ +++P+N +
Sbjct: 318 KGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPENCE 377
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
A K ++++ GQT ++ L + K+ P DA + +DL ++ + L +
Sbjct: 378 ALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQ-AFLDLGELLITSDTG--AALDAFKT 434
Query: 232 AQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF----ADLQWKNAIDHADLITEVA 286
A+ +++ G+E+P++L G+ Y G E AE F D W + ID D A
Sbjct: 435 ARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIWLSFID--DKAYSYA 492
Query: 287 DTLMSLGHSNSALKYYHFLETNAGT-----DNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
+ + H ++ +H LE + + + LA L A + + L
Sbjct: 493 NDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNNTKTASILYRLIL 552
Query: 342 DRFEDNIDARLTLASL 357
+F D IDA L LA++
Sbjct: 553 FKFPDYIDAYLRLAAI 568
>gi|147769448|emb|CAN74770.1| hypothetical protein VITISV_014241 [Vitis vinifera]
Length = 306
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+N L ++G ++ Y +F+ I+ +E +++ P E Y + A GN
Sbjct: 91 RNSLRTDNLLLMG--AIYYQLHDFDMCIARNEEALQIDPRFAECYGNMANAWKEKGNVDL 148
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A +Y+IA L P W L + ++KG +A RQA+ P + +L +F
Sbjct: 149 AIRYYLIAIELRPNFCDAWSNLASAYMRKGRLNEAAQCCRQALAINPLLVDAHSNLGNFM 208
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DA 204
G ++A Y + ++ P A A LF++ G R++ +E +K+ P+ DA
Sbjct: 209 KAQGLIQEAYSCYIEALRIQPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKPTFADA 268
Query: 205 DLSVIDLLVAILMENNA---YEKTLQ 227
L++ ++ A+ M A Y++ LQ
Sbjct: 269 YLNLGNVYKALGMPQEAIVCYQRALQ 294
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 59/121 (48%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + ++P L + ++ LG A G + A+ Y+ A + P + W
Sbjct: 178 GRLNEAAQCCRQALAINPLLVDAHSNLGNFMKAQGLIQEAYSCYIEALRIQPSFAIAWSN 237
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P ++L + Y +G ++A Y++ + P
Sbjct: 238 LAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYKALGMPQEAIVCYQRALQTRP 297
Query: 168 D 168
+
Sbjct: 298 E 298
>gi|339247555|ref|XP_003375411.1| conserved hypothetical protein [Trichinella spiralis]
gi|316971238|gb|EFV55042.1| conserved hypothetical protein [Trichinella spiralis]
Length = 330
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 10 RKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE 69
+K ++ ++ + K + L + +LG ASL +A G ++AI+L K+V+R P L +
Sbjct: 95 KKTSKSTTVQQPKAKYYRRHLPEQLQSILGHASLCFANGEVKKAITLCKDVIRERPKLHD 154
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLS-PKDSALWKQLLTFAVQKGDTAQAMYYIRQA 128
Y L + + LGN F + AA L+ D++ WK+L A G +QA+ ++ A
Sbjct: 155 AYELLSVFYGDLGNRTKCFHHAMAAAMLNRATDASRWKELAETATDLGFYSQAVLCLKNA 214
Query: 129 IRAEPKDISL 138
I EP + +L
Sbjct: 215 INLEPMNWAL 224
>gi|432931295|ref|XP_004081644.1| PREDICTED: LOW QUALITY PROTEIN: intraflagellar transport protein 88
homolog [Oryzias latipes]
Length = 840
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L G+ +QAI L +V+ ++P P LG H+ G A +Y + P
Sbjct: 558 ADLYEQLGDLQQAIEWLMQVISVTPTDPHILAKLGKLHNDEGEKSQALHYYSESFRYFPS 617
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + L + + A+ Y +A +P + ++ +AS Y G+Y+KA E+Y+
Sbjct: 618 NINVITWLGAYYLDTQFCENAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYQ 677
Query: 161 QIQKLFPDNVDATKTGAQLFLKCG 184
I + FPDNV+ + +L G
Sbjct: 678 NIHRKFPDNVECLRFLVRLSTDMG 701
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 91/237 (38%), Gaps = 44/237 (18%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
N+ +P ++ + + + ++E+A KE ++ + E LGL + L + A
Sbjct: 479 NRYNPAA--LVNKGNTVFVKQDYEKAAEFFKEALKNDSSCTEGLYNLGLTYKRLNRLEDA 536
Query: 88 FD-FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
D F + A L D + Q+ Q GD QA+ ++ Q I P D + L +
Sbjct: 537 LDCFLKLNAILRNSDQVMC-QIADLYEQLGDLQQAIEWLMQVISVTPTDPHILAKLGKLH 595
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ G+ +A Y + + FP N++
Sbjct: 596 NDEGEKSQALHYYSESFRYFPSNIN----------------------------------- 620
Query: 207 SVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
VI L A ++ E +Q+ E A ++ + +K ++ CY R GN +KA
Sbjct: 621 -VITWLGAYYLDTQFCENAIQYFERATLI----QPTQVKWQLMVASCYRRSGNYQKA 672
>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 1337
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 107/259 (41%), Gaps = 9/259 (3%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +E+AIS + ++ P+ E + G+A S LG H+ A Y A + P
Sbjct: 426 YDLGEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEA 485
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W + G+ +A+ QAI+ +P D + +G+YEKA SY+Q K
Sbjct: 486 WSNRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIK 545
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD-LSVIDLLVAILMENNAYE 223
PD +A G+ ++I ++ +K P D S + ++ L E YE
Sbjct: 546 FKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGE---YE 602
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLIT 283
K + + Q ++F K + G+ LG EKA I D K D+ + +
Sbjct: 603 KAISSYD--QAIKF--KPDFHEAWSNRGLALSYLGEYEKA-ISSYDQAIKFKPDYHEAWS 657
Query: 284 EVADTLMSLGHSNSALKYY 302
L LG A+ Y
Sbjct: 658 NRGGALSHLGEYEKAISSY 676
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AIS + ++ P+ E ++ G A S LG ++ A Y A P D W
Sbjct: 531 GEYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSN 590
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G+ +A+ QAI+ +P + +G+YEKA SY+Q K P
Sbjct: 591 RGVALSYLGEYEKAISSYDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKP 650
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D +A G+ ++I ++ +K P
Sbjct: 651 DYHEAWSNRGGALSHLGEYEKAISSYDQAIKFKP 684
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AIS + ++ P+L E + G A LG ++ A Y A P W
Sbjct: 225 GEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFKPDLHEAWNN 284
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G+ +A+ QAI+ +P + +G+YEKA SY+Q K P
Sbjct: 285 RGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISSYDQAIKFKP 344
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D +A G+ ++I ++ +K P
Sbjct: 345 DLHEAWNNRGNALANLGEYEKAISSYDQAIKFKP 378
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AIS + ++ P+ E + G+A S LG ++ A Y A P W
Sbjct: 293 GEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISSYDQAIKFKPDLHEAWNN 352
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G+ +A+ QAI+ +P + +G+YEKA SY+Q K P
Sbjct: 353 RGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKP 412
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D +A G+ ++I ++ +K P
Sbjct: 413 DYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKP 446
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AIS + ++ P+ E + GLA LG ++ A Y A P W
Sbjct: 395 GEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFV 454
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G+ +A+ QAI+ +P + S +G+YEKA SY+Q K P
Sbjct: 455 RGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISSYDQAIKFKP 514
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D+ +A G+ ++I ++ +K P
Sbjct: 515 DDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKP 548
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AIS + ++ P+ + ++ G+A S LG ++ A Y A P W
Sbjct: 565 GEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGEYEKAISSYDQAIKFKPDFHEAWSN 624
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G+ +A+ QAI+ +P + +G+YEKA SY+Q K P
Sbjct: 625 RGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSHLGEYEKAISSYDQAIKFKP 684
Query: 168 D 168
D
Sbjct: 685 D 685
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AIS + ++ P+ E + G+A S LG ++ A A P W
Sbjct: 191 GEYEKAISSCDQAIKFKPDYHEAWANRGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLV 250
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G+ +A+ QAI+ +P + + +G+YEKA S +Q K P
Sbjct: 251 RGSALGNLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAIKFKP 310
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D +A G+ ++I ++ +K P
Sbjct: 311 DYHEAWLVRGVALSYLGEYEKAISSYDQAIKFKP 344
>gi|401882460|gb|EJT46718.1| RNA polymerase III transcription factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 977
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
++ +K + S V +LG A+L Y + +A++L EV+R P + ++TL + +G
Sbjct: 98 KRPAKRRPSHEVQLLLGRANLAYITQDHNEAVNLFLEVIRHDPQVQAAWSTLASVYEEMG 157
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
N + A AH+ +D W++L +G+ QA+Y R+A++ + + + L
Sbjct: 158 NVEMARQMKFCGAHIE-EDIGTWRELADQFRSEGNLTQALYCYRKALKIDGSRLDIVWQL 216
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFP 167
+ Y E Y A E+ +I + P
Sbjct: 217 VNIYRETQSYNMAVEAIRKIHRAEP 241
>gi|414077742|ref|YP_006997060.1| hypothetical protein ANA_C12526 [Anabaena sp. 90]
gi|413971158|gb|AFW95247.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 519
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 30/188 (15%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
+ Y G + AI+ + + ++ N P+ YN +GL H +GN+ A + Y A ++P +
Sbjct: 268 VNYQLGEYHTAITNYSQAINININHPQAYNQIGLVHYQIGNYHIAIEAYTQAIRINPHIA 327
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP------KD-----------------ISLR 139
+K GDT A+ QAI P KD I +
Sbjct: 328 INYKNRADVRSHIGDTQGAIEDYNQAINLNPDYATTQKDRQISRYLLDKQQQLKQIIDID 387
Query: 140 IHLASFY-------VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
H A Y VE+GDYE A Y Q+ ++ PD++DA G+ A +I
Sbjct: 388 PHDAIGYKNRGHDRVELGDYEGAITDYNQVIQINPDDIDAYYCRGNAHFDLGKYAAAIAD 447
Query: 193 LEEYLKVH 200
+ +K++
Sbjct: 448 YTQVIKMN 455
>gi|397665008|ref|YP_006506546.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
gi|395128419|emb|CCD06633.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
Length = 577
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 159/357 (44%), Gaps = 32/357 (8%)
Query: 30 LSPGVTKMLGEA-SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
++ V + +A LQY G+ QAISL ++++ SP ET + LGL ++ LG+ ++A
Sbjct: 1 MNSEVDTLFAQAYKLQYE-GHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMENAI 59
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+++ A ++P D + L + G +A+ Y +QAI +P+ + +LA+ Y
Sbjct: 60 LYFLQARKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYAL 119
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--- 205
+ +Y+KA Y PD A L LK Q + + + ++P +
Sbjct: 120 LNNYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQF 179
Query: 206 -LSVIDLLVAILME-NNAYEKTL-QHIEHAQIVRFSG----KELPLKLKVKAGICYLRLG 258
L ++ L +L E A+ K L Q EH Q + G K +L V L L
Sbjct: 180 YLGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239
Query: 259 NME-------KAEILFADLQWKNAIDHAD-LITEVADTL----------MSLGHSNSALK 300
N + A + D +++NA+ H D L+ + D L M+LGH N A
Sbjct: 240 NEDIDARNNLAATFMHHD-RFENALMHYDVLLKKEPDNLEYLYNSGVAQMALGHLNEATL 298
Query: 301 YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
+ + T +D+ LA YL + R A + +AL D++ +R L ++
Sbjct: 299 LFDQILT-LQSDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDVVSRHMLNAI 354
>gi|52842693|ref|YP_096492.1| hypothetical protein lpg2485 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778381|ref|YP_005186820.1| hypothetical protein lp12_2477 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52629804|gb|AAU28545.1| TPR domain protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364509197|gb|AEW52721.1| TPR domain protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 571
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 159/357 (44%), Gaps = 32/357 (8%)
Query: 30 LSPGVTKMLGEA-SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
++ V + +A LQY G+ QAISL ++++ SP ET + LGL ++ LG+ ++A
Sbjct: 1 MNSEVDTLFAQAYKLQYE-GHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMENAI 59
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+++ A ++P D + L + G +A+ Y +QAI +P+ + +LA+ Y
Sbjct: 60 LYFLQARKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYAL 119
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--- 205
+ +Y+KA Y PD A L LK Q + + + ++P +
Sbjct: 120 LNNYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQF 179
Query: 206 -LSVIDLLVAILME-NNAYEKTL-QHIEHAQIVRFSG----KELPLKLKVKAGICYLRLG 258
L ++ L +L E A+ K L Q EH Q + G K +L V L L
Sbjct: 180 YLGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239
Query: 259 NME-------KAEILFADLQWKNAIDHAD-LITEVADTL----------MSLGHSNSALK 300
N + A + D +++NA+ H D L+ + D L M+LGH N A
Sbjct: 240 NEDIDARNNLAATFMHHD-RFENALMHYDVLLKKEPDNLEYLYNSGVAQMALGHLNEATL 298
Query: 301 YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
+ + T +D+ LA YL + R A + +AL D++ +R L ++
Sbjct: 299 LFDQILT-LQSDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDVISRHMLNAI 354
>gi|356535232|ref|XP_003536152.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Glycine max]
Length = 988
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 21/254 (8%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+N L +LG ++ Y +F+ ++ +E +R+ P+ E Y + A GN
Sbjct: 93 RNPLRTDNLLLLG--AVYYQLHDFDMCVAKNEEALRIEPHFAECYGNMANAWKEKGNIDL 150
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A +Y+IA L P + W L + ++KG +A RQA+ P + +L +
Sbjct: 151 AIRYYLIAIELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLM 210
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DA 204
G ++A Y + ++ P A A LF++ G R++ +E +K+ PS DA
Sbjct: 211 KAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDA 270
Query: 205 DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EK 262
L++ ++ A+ M ++ + +HA L+ + G+ Y L ++ E+
Sbjct: 271 YLNLGNVYKALGMP----QEAIACYQHA-----------LQTRPNYGMAYGNLASIYYEQ 315
Query: 263 AEILFADLQWKNAI 276
++ A L +K A+
Sbjct: 316 GQLDMAILHYKQAV 329
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F +A+ KE V+L P+ P+ Y LG + ALG + A Y A P +
Sbjct: 248 GDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQHALQTRPNYGMAYGN 307
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++G A+ + +QA+ +P+ + +L + ++G E+A + Y Q L P
Sbjct: 308 LASIYYEQGQLDMAILHYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQP 367
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
++ A ++++ A + + L V
Sbjct: 368 NHPQALTNLGNIYMEWNMVAAAAQYYKATLNV 399
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 62/154 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI + + L PN P+ LG + +A +Y +++ SA +
Sbjct: 350 GRVEEAIQCYNQCLTLQPNHPQALTNLGNIYMEWNMVAAAAQYYKATLNVTTGLSAPYNN 409
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A+ + +R +P ++ + Y EIG A + Y + + P
Sbjct: 410 LAIIYKQQGNYVDAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAIVVRP 469
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+A A + G ++ ++ L + P
Sbjct: 470 TMAEAHANLASAYKDSGHVEAAVKSYKQALILRP 503
>gi|350855078|emb|CAZ28671.2| o-linked n-acetylglucosamine transferase, ogt,putative [Schistosoma
mansoni]
Length = 690
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 154/385 (40%), Gaps = 41/385 (10%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+ +L + + LGEA FE A + +++ +P + Y L GN +
Sbjct: 25 RARLPIELAQYLGEAERHLNNDEFEHAERICYQIIDTAPQASQPYIVLAEISFRRGNQEK 84
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A +F AA +P D W L+ +A + D A++Y RQA+R D SLR L
Sbjct: 85 AKEFLYQAAQRNPSDQNTWLTLMDWAEEAEDFPLAIHYARQALRRNRADTSLRQRLIDLC 144
Query: 147 VEIGDYEKAAESYEQIQKLFPDNV-----DATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
G +A + + P++ + + A F K S+ E + +P
Sbjct: 145 HVAGRSREALQLRLAALSVTPESTGEEQFEVARELADQFFKLLDPHNSVKAYENAFEQYP 204
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHIEH-----------------------AQIVRFS 238
+ + ++I+++ Y++ L+ + + +F
Sbjct: 205 DHGTDNDRNSALSIMLQMKRYDQALKFFTSFCGVKLYLNSGDLFDMDRHSSKLSSVEKFK 264
Query: 239 GKELP------LKLKVKAGICYLRLGNM--EKAEILFADLQWKNAIDHADLITEVADTLM 290
E P L+LK+ + +L LG + + E + + +N ++D + ++
Sbjct: 265 RCEFPDNMAVELQLKLFLILAHLGLGPLVVSRVESTYTN---ENITKYSDWLLDIVVAYK 321
Query: 291 SLGHSNSALKYYHFL-ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE-DNI 348
+ A++ L ++N ++ LAECYL E AI + ++ + +
Sbjct: 322 EKNLYSIAIQLILKLKKSNVTCKLVQVWTLLAECYLEAGETESAIKAYRHVIENLDPRHT 381
Query: 349 DARLTLASLLLEEAKEEEAITLLSP 373
DARL L +LL + +EA+ L+P
Sbjct: 382 DARLGLVNLLRRLGRNQEALKFLNP 406
>gi|291288388|ref|YP_003505204.1| hypothetical protein Dacet_2488 [Denitrovibrio acetiphilus DSM
12809]
gi|290885548|gb|ADD69248.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 510
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
+ A G E A+ L+K+ V L P +N LG + G + A AA L P S
Sbjct: 49 IHIANGKTESALELMKQAVSLDKTNPVFHNNLGEIYRQTGQFEHAEFHLSSAAELKPNYS 108
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
+ L ++G A Y +A++++PK++S I+ + + G YE A + YE
Sbjct: 109 DAFSNLGLLYKERGLVNDAKYCFAEALQSDPKNLSALINTGNLFNSEGSYEDAIQCYEAA 168
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++ PDN +A + + K G+ S + HP
Sbjct: 169 LEISPDNPNALASAGAAYYKTGEYNTSAKYYSRLVNGHP 207
>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
Length = 345
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
Query: 42 SLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
L YAY G+ E+AI + + + P+L Y GLA +G++ A Y A L+
Sbjct: 98 DLGYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALN 157
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P+D + L KGD +A+ ++AI P++ + +L + Y ++ DY+KA E
Sbjct: 158 PEDPDYYYNLGIVYRIKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVEC 217
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
Y++ ++ P + +L G +++ ++ LK+ A+ +D+ +A L E
Sbjct: 218 YKKAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAE-CYMDMGIA-LKE 275
Query: 219 NNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
Y++ L+ E A+ + K L L K Y G+ EKA
Sbjct: 276 LGRYDEALKAYEKAEQINPDLKALSLYNKA---CLYASKGDKEKA 317
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P +L +A + + GN +A LLK+ + L N PE+Y LG + GN + A Y
Sbjct: 24 PYPENILYKAVIHFHTGNNIKAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVK-Y 82
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
+ A K + + L KGD +A+ +AI +P + + ++GD
Sbjct: 83 LKKAVEKGKKAEYFNDLGYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGD 142
Query: 152 YEKAAESYEQIQKLFPDNVD 171
Y++A ++Y + L P++ D
Sbjct: 143 YDEAVKNYNRAIALNPEDPD 162
>gi|350855077|emb|CAZ28670.2| o-linked n-acetylglucosamine transferase, ogt,putative [Schistosoma
mansoni]
Length = 742
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 154/385 (40%), Gaps = 41/385 (10%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+ +L + + LGEA FE A + +++ +P + Y L GN +
Sbjct: 25 RARLPIELAQYLGEAERHLNNDEFEHAERICYQIIDTAPQASQPYIVLAEISFRRGNQEK 84
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A +F AA +P D W L+ +A + D A++Y RQA+R D SLR L
Sbjct: 85 AKEFLYQAAQRNPSDQNTWLTLMDWAEEAEDFPLAIHYARQALRRNRADTSLRQRLIDLC 144
Query: 147 VEIGDYEKAAESYEQIQKLFPDNV-----DATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
G +A + + P++ + + A F K S+ E + +P
Sbjct: 145 HVAGRSREALQLRLAALSVTPESTGEEQFEVARELADQFFKLLDPHNSVKAYENAFEQYP 204
Query: 202 SDADLSVIDLLVAILMENNAYEKTLQHIEH-----------------------AQIVRFS 238
+ + ++I+++ Y++ L+ + + +F
Sbjct: 205 DHGTDNDRNSALSIMLQMKRYDQALKFFTSFCGVKLYLNSGDLFDMDRHSSKLSSVEKFK 264
Query: 239 GKELP------LKLKVKAGICYLRLGNM--EKAEILFADLQWKNAIDHADLITEVADTLM 290
E P L+LK+ + +L LG + + E + + +N ++D + ++
Sbjct: 265 RCEFPDNMAVELQLKLFLILAHLGLGPLVVSRVESTYTN---ENITKYSDWLLDIVVAYK 321
Query: 291 SLGHSNSALKYYHFL-ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE-DNI 348
+ A++ L ++N ++ LAECYL E AI + ++ + +
Sbjct: 322 EKNLYSIAIQLILKLKKSNVTCKLVQVWTLLAECYLEAGETESAIKAYRHVIENLDPRHT 381
Query: 349 DARLTLASLLLEEAKEEEAITLLSP 373
DARL L +LL + +EA+ L+P
Sbjct: 382 DARLGLVNLLRRLGRNQEALKFLNP 406
>gi|406951392|gb|EKD81348.1| hypothetical protein ACD_39C01851G0002 [uncultured bacterium]
Length = 276
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 14/243 (5%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
R+G KN+++ + LG AS + G+ E AI + ++L + E + +G++ + G
Sbjct: 17 RQG-KNRVNAEIA--LGIASFEN--GDVETAIRHYERALKLKSDSAEAHAGMGISSARAG 71
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
N A + A LSP L L KG+ +A+ Y +AIR D + +
Sbjct: 72 NLDKAVEHLQRAYELSPDCGLLANWLADAWFDKGELDRAIEYYSEAIRNNATDSNAHNDM 131
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A Y GDY+KA E Y + ++ P + +A AQ + Q ++ L + PS
Sbjct: 132 ADAYRLQGDYQKAFELYRRTLQIDPLDTNAMLEMAQCQTQMNQPDEALQTLTNLINNFPS 191
Query: 203 DADLSVIDLLVA-ILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKV--KAGICYLRLGN 259
D + ++ IL+ N Y + A + F P +V ++ +C L+ GN
Sbjct: 192 SRDSATAMVICGTILLGNGDYNNAGSWFDRA--LEF----FPFNRQVLFQSAVCALKQGN 245
Query: 260 MEK 262
E+
Sbjct: 246 SEQ 248
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI E +R + +N + A+ G+++ AF+ Y + P D+ +
Sbjct: 105 GELDRAIEYYSEAIRNNATDSNAHNDMADAYRLQGDYQKAFELYRRTLQIDPLDTNAMLE 164
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKD---ISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ Q +A+ + I P + + + + GDY A +++ +
Sbjct: 165 MAQCQTQMNQPDEALQTLTNLINNFPSSRDSATAMVICGTILLGNGDYNNAGSWFDRALE 224
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
FP N A LK G + + L+ L++ PSD
Sbjct: 225 FFPFNRQVLFQSAVCALKQGNSEQCAAHLKRILEMDPSD 263
>gi|148360062|ref|YP_001251269.1| methyltransferase [Legionella pneumophila str. Corby]
gi|296108117|ref|YP_003619818.1| hypothetical protein lpa_03621 [Legionella pneumophila 2300/99
Alcoy]
gi|148281835|gb|ABQ55923.1| methyltransferase [Legionella pneumophila str. Corby]
gi|295650019|gb|ADG25866.1| Hypothetical protein lpa_03621 [Legionella pneumophila 2300/99
Alcoy]
Length = 577
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 159/357 (44%), Gaps = 32/357 (8%)
Query: 30 LSPGVTKMLGEA-SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
++ V + +A LQY G+ QAISL ++++ SP ET + LGL ++ LG+ ++A
Sbjct: 1 MNSEVDTLFAQAYKLQYE-GHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMENAI 59
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+++ A ++P D + L + G +A+ Y +QAI +P+ + +LA+ Y
Sbjct: 60 LYFLQARKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYAL 119
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--- 205
+ +Y+KA Y PD A L LK Q + + + ++P +
Sbjct: 120 LNNYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQF 179
Query: 206 -LSVIDLLVAILME-NNAYEKTL-QHIEHAQIVRFSG----KELPLKLKVKAGICYLRLG 258
L ++ L +L E A+ K L Q EH Q + G K +L V L L
Sbjct: 180 YLGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239
Query: 259 NME-------KAEILFADLQWKNAIDHAD-LITEVADTL----------MSLGHSNSALK 300
N + A + D +++NA+ H D L+ + D L M+LGH N A
Sbjct: 240 NEDIDARNNLAATFMHHD-RFENALMHYDVLLKKEPDNLEYLYNSGVAQMALGHLNEATL 298
Query: 301 YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
+ + T +D+ LA YL + R A + +AL D++ +R L ++
Sbjct: 299 LFDQILT-LQSDHTPSLNNLAAIYLKMDMRETAREYLERALVINPDDVVSRHMLNAI 354
>gi|118350024|ref|XP_001008293.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89290060|gb|EAR88048.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 373
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 59 EVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL-LTFAVQKG- 116
+V+ ++PN LG+ LG +++A FY A L+P+D+ + L +T+ K
Sbjct: 156 QVLEINPNFKSVVYNLGIISEKLGEYENAKQFYQKAIQLNPQDANTYFNLGVTYEKMKNV 215
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
+ A+ Y Q + EPK I +L + Y ++G +++A + +E I K+ P N A
Sbjct: 216 EEARKCYLKVQQL--EPKSIYALNNLGAIYFDLGQFQEAQKCFEDIIKIDPQNFGAYYNL 273
Query: 177 AQLFLKCGQTARSIGILEEYLKVHP 201
+ +++K G SI L++ ++++P
Sbjct: 274 SAIYIKKGNIEESIQCLQKTIQINP 298
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E A ++ ++L+P TY LG+ + + N + A Y+ L PK
Sbjct: 179 GEYENAKQFYQKAIQLNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQQLEPKSIYALNN 238
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G +A I+ +P++ +L++ Y++ G+ E++ + ++ ++ P
Sbjct: 239 LGAIYFDLGQFQEAQKCFEDIIKIDPQNFGAYYNLSAIYIKKGNIEESIQCLQKTIQINP 298
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++A K Q+F GQ +I ++ +K++ D+D
Sbjct: 299 EYINAHKQLGQIFYTKGQFDEAIQCYQQAIKINSQDSD 336
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 57/124 (45%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N E+A +V +L P N LG + LG + A + + P++ + L
Sbjct: 214 NVEEARKCYLKVQQLEPKSIYALNNLGAIYFDLGQFQEAQKCFEDIIKIDPQNFGAYYNL 273
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
++KG+ +++ +++ I+ P+ I+ L + G +++A + Y+Q K+
Sbjct: 274 SAIYIKKGNIEESIQCLQKTIQINPEYINAHKQLGQIFYTKGQFDEAIQCYQQAIKINSQ 333
Query: 169 NVDA 172
+ D+
Sbjct: 334 DSDS 337
>gi|148262768|ref|YP_001229474.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146396268|gb|ABQ24901.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 632
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 134/316 (42%), Gaps = 18/316 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN + A++ +E ++ P+ LGL + G A A +P A K
Sbjct: 78 GNLDGAVTEYQESLKDDPDFGPASGNLGLIYLQKGLQDDAAVELTKAIKTTPS-PAYNKA 136
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L K A+Y+ +AI A P D SL LA Y +G A E Y ++ + P
Sbjct: 137 LGKIFSDKKLYNLALYHYNEAINALPADTSLYADLAGVYTGMGLINSAEEEYNKVLAIEP 196
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
N++A A LF Q ++IG L++ + P + + I L+A AY+K
Sbjct: 197 GNLNARLGLAALFSSRNQFDKAIGELKKAQVIDPGNKN---IHRLLA-----EAYDKKGD 248
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGN--MEKAEILFADLQWKNAI----DHADL 281
+G +P+K + A +LR G+ ++ E A ++K A+ + +
Sbjct: 249 KKSSEYEYILAG--IPVKTEEVAQSNHLRQGDEFVKNKEYEKAATEYKAALKDKPEWPEA 306
Query: 282 ITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
+ ++ D M+ GH + A+ Y +NG L+ L Y A++ + +AL
Sbjct: 307 LQKLGDAQMAAGHDDEAIASYREA-IRLKAENGNLHYNLGILYERKALLDEAVVEYRQAL 365
Query: 342 DRFEDNIDARLTLASL 357
+ DN D R LA +
Sbjct: 366 NYTADNGDTRRRLADI 381
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 4/196 (2%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P + LG+A Q A G+ ++AI+ +E +RL + LG+ + A Y
Sbjct: 304 PEALQKLGDA--QMAAGHDDEAIASYREAIRLKAENGNLHYNLGILYERKALLDEAVVEY 361
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A + + + ++L +G QA+ R+ I+ + + LA YV D
Sbjct: 362 RQALNYTADNGDTRRRLADIYTLRGSFPQAIEQYRELIKLRKDNPLIHFKLAKVYVNSKD 421
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
Y A Y + KL PDN++A + A LF K Q + L++ D +
Sbjct: 422 YPAAISEYLETTKLDPDNIEAHRDLAALFRKKNQNEEAEKEYRSILRMKKDDVEARTA-- 479
Query: 212 LVAILMENNAYEKTLQ 227
L +I ++N Y++ +
Sbjct: 480 LTSIYVKNKNYDELIN 495
>gi|383320702|ref|YP_005381543.1| Tfp pilus assembly protein PilF [Methanocella conradii HZ254]
gi|379322072|gb|AFD01025.1| Putative Tfp pilus assembly protein PilF [Methanocella conradii
HZ254]
Length = 416
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
FE A L+E +RL P+ ++T+G S +G A A L P D+ L
Sbjct: 173 FEDAAKELREAIRLKPDEALVHSTMGNTLSLIGELDEAIKECEEAVRLDPCDAEYHHSLG 232
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
++KG+T +A+ + +AI+ +P+DI AS + E + +A ++ K+ PD+
Sbjct: 233 IILMEKGETNRALAELEEAIKLDPRDIDAYFISASIHFEKEENGEAIGLLQEAVKISPDS 292
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
DA A +L+ G +I E L ++P D D
Sbjct: 293 PDAHHNLAIGYLQVGSIGDAIKEFIEALNLNPDDID 328
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 77/165 (46%)
Query: 57 LKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG 116
KEV+++ P+ + LG +++ +++A Y A + P ++ + V
Sbjct: 112 FKEVLKIEPDNFYSRLYLGDIYASEDEYENAKSEYREALRIEPDSWEAHFKMGSTHVLSM 171
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
+ A +R+AIR +P + + + + IG+ ++A + E+ +L P + + +
Sbjct: 172 EFEDAAKELREAIRLKPDEALVHSTMGNTLSLIGELDEAIKECEEAVRLDPCDAEYHHSL 231
Query: 177 AQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
+ ++ G+T R++ LEE +K+ P D D I + E N
Sbjct: 232 GIILMEKGETNRALAELEEAIKLDPRDIDAYFISASIHFEKEENG 276
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 34/127 (26%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ + +AI LL+E V++SP+ P+ ++ L + + +G+ A ++
Sbjct: 266 ASIHFEKEENGEAIGLLQEAVKISPDSPDAHHNLAIGYLQVGSIGDAIKEFI-------- 317
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+A+ P DI R LA Y+E+G Y A E
Sbjct: 318 --------------------------EALNLNPDDIDTRYDLAKLYIELGLYSLARTELE 351
Query: 161 QIQKLFP 167
+I + P
Sbjct: 352 EILEAAP 358
>gi|54298485|ref|YP_124854.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris]
gi|397668165|ref|YP_006509702.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
gi|53752270|emb|CAH13702.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris]
gi|395131576|emb|CCD09863.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
Length = 577
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 31/367 (8%)
Query: 30 LSPGVTKMLGEA-SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
++ V + +A LQY G+ QAISL ++++ SP ET + LGL ++ LG+ ++A
Sbjct: 1 MNSEVDTLFAQAYKLQYE-GHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMENAI 59
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+++ A ++P D + L + G +A+ Y +QAI +P+ + +LA+ Y
Sbjct: 60 LYFLQAKKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYAL 119
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--- 205
+ +Y+KA Y PD A L LK Q + + + ++P +
Sbjct: 120 LNNYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPKHREAQF 179
Query: 206 -LSVIDLLVAILME-NNAYEKTL-QHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEK 262
L ++ L +L E A+ K L Q EH Q + + G+ L+ E+
Sbjct: 180 YLGILHLEDNLLSEAEQAFHKVLEQDHEHVQSL------------INLGVIALK---REQ 224
Query: 263 AEILFADLQWKNAIDHADLI--TEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKL 320
++ A+D+ D+ +A T M +AL +Y L + YLY
Sbjct: 225 NQLAVDYFTKALALDNEDIDARNNLAATFMHHDRFENALMHYDVLLKKEPNNLEYLY-NS 283
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLL-----EEAKEEEAITLLSPPK 375
++L A + F + L D+ + LA++ L E A+E L+ P
Sbjct: 284 GVAQMALGHLNEATLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALVINPD 343
Query: 376 DLDSLDM 382
D+ S M
Sbjct: 344 DVVSRHM 350
>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 600
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++E+AI+ + ++L+P+ Y GLA S LG+ + A Y A ++P +A +
Sbjct: 359 GDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNN 418
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD A+ QAI+ P + + ++GDY++A + Q K+ P
Sbjct: 419 RGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINP 478
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
D+ DA G +I + +K++P DAD
Sbjct: 479 DDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDAD 516
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N++ AI+ + ++++P+ Y GLA S LG+++ A Y A L+P D+ +
Sbjct: 88 NYQGAIADFNQAIKINPDYAIAYYNRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNNR 147
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
GD +A+ QAI+ P D + + ++GDY+ A Y Q K+ PD
Sbjct: 148 GLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPD 207
Query: 169 NVDA--TKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
DA + A+ L+ Q A I + ++++P DA
Sbjct: 208 YADAYNNRGNARSNLEDYQGA--IADYTQAIQLNPDDA 243
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ + ++++P+L YN GLA S LG+ + A Y A ++P +A +
Sbjct: 393 GDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQINPDLAAAYNN 452
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD +A+ QAI+ P D + + +GDY+ A + Q K+ P
Sbjct: 453 RGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIADFTQAIKINP 512
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ DA G +I + +K++P
Sbjct: 513 GDADAYYNRGNARSDLGDYQGAIADYNQAIKLNP 546
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+++ AI+ + ++++P+ + YN G A S L +++ A Y A L+P D+ +
Sbjct: 189 GDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSN 248
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
D A+ QAI+ P + ++ DY+ A + Q ++ P
Sbjct: 249 RGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINP 308
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D +A G +I + ++++P
Sbjct: 309 DYANAYYNRGNARSDLGDDQGAIADFNQAIQLNP 342
>gi|385301978|gb|EIF46132.1| one of six subunits of the rna polymerase iii transcription
initiation factor complex [Dekkera bruxellensis
AWRI1499]
Length = 653
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 1/182 (0%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL 81
RRK + + SP V +LG+A+ + ++A + EVV++ Y TLG
Sbjct: 164 RRKIRREEPSPEVKILLGKANEAFVRNELDKASNFYLEVVKMDKMNFSAYKTLGEIARLK 223
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PKDISLRI 140
G++ +F+++AAH+ D W++L +V+ G QA+Y +AI++ KD
Sbjct: 224 GDYNRCSNFWLLAAHIHQWDYEFWRELAELSVELGHQRQAVYCYTKAIKSSHHKDYESIF 283
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
A Y E +++A +S +++ + P + A++++ + +I + ++ L+ +
Sbjct: 284 ARACIYREQRRFKRATDSLLKLRTVLPKEXKIVRELAKVYVDEDRVNDAITMYKKILEDN 343
Query: 201 PS 202
S
Sbjct: 344 MS 345
>gi|348538306|ref|XP_003456633.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Oreochromis niloticus]
Length = 824
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
ASL N EQAI L +V+ ++P + LG H G+ AF +Y + P
Sbjct: 558 ASLYELLENPEQAIEWLMQVISVTPTDAQALAKLGELHDGEGDKSQAFQYYYESFRYFPS 617
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + L + ++ +A+ Y +A +P + ++ +AS Y G+ +KA E+Y+
Sbjct: 618 NIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNSQKALETYK 677
Query: 161 QIQKLFPDNVD 171
+I + FP+NV+
Sbjct: 678 EIHRKFPENVE 688
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 105/288 (36%), Gaps = 67/288 (23%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A KE +R + E LGL + L + A D ++ + S + QL
Sbjct: 499 YEKAAEFYKEALRNDSSCTEGLYNLGLTYKRLNRLEEALDCFLKLHAILRNSSQVMYQLA 558
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ + QA+ ++ Q I P D L + GD +A + Y + + FP N
Sbjct: 559 SLYELLENPEQAIEWLMQVISVTPTDAQALAKLGELHDGEGDKSQAFQYYYESFRYFPSN 618
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
+D VI+ L A +E EK +Q+
Sbjct: 619 ID------------------------------------VIEWLGAYYIETQFCEKAIQYF 642
Query: 230 EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA-----EI----------------LFA 268
E A +++ + +K ++ CY R GN +KA EI L
Sbjct: 643 ERATLIQPT----QVKWQLMVASCYRRSGNSQKALETYKEIHRKFPENVECLRFLVRLCT 698
Query: 269 DLQWKNAIDHA------DLITEVADTLMSLGHSNSALKYYHFLETNAG 310
D+Q K D+A + + E+ + + G SA E++AG
Sbjct: 699 DMQLKEVQDYATKLKKVEKMKEIREQRIKSGREGSARSRREGRESSAG 746
>gi|300869588|ref|ZP_07114169.1| putative Serine/threonine protein kinase with TPR repeats
[Oscillatoria sp. PCC 6506]
gi|300332456|emb|CBN59369.1| putative Serine/threonine protein kinase with TPR repeats
[Oscillatoria sp. PCC 6506]
Length = 774
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 46 AYGNFE---QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
AY + E A+ +V+RL+PN E Y L + LG++K+A + Y A L+P D+
Sbjct: 463 AYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQAIRLNPNDA 522
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
+ GD AM QAI PK S+ + DY+ A E Y Q
Sbjct: 523 KSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKGAMEDYSQA 582
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P+ DA +L ++I + + + P +A+
Sbjct: 583 IVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAE 625
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G+++ AI + +RL+PN ++Y+ GLA SA G+ + A + A L+PK +++
Sbjct: 499 YELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASV 558
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ D AM QAI +P + S Y+ + Y+KA E Q
Sbjct: 559 YYSRGRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIA 618
Query: 165 LFPDNVDA 172
L P N +A
Sbjct: 619 LDPKNAEA 626
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 3/180 (1%)
Query: 29 KLSPGVTKMLGEASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+ +P K E ++Q A G+ AI+ + + L+ E Y H LG ++ A
Sbjct: 380 RQAPARAKEFYERAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRANTHYDLGAYQQA 439
Query: 88 FDFYVIAAHLSPKD-SALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
Y A + P + A + + L + D A+ Q IR P D A Y
Sbjct: 440 IQDYTQAIQVDPNNVKAYYNRGLAY-TDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGY 498
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
E+GDY+ A E Y Q +L P++ + G ++ + ++++P A +
Sbjct: 499 YELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASV 558
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI + + L P E YN +A LG+++ A + + ++ + +
Sbjct: 606 YDKAIEDCTQAIALDPKNAEAYNNRCIARLNLGDYQKASEDCSLTIGITGNNPKAFSNRG 665
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
GD A+ QAIR P D + Y EI +Y A E + Q +L P+N
Sbjct: 666 LARSAIGDKQGAIEDFSQAIRLNPSDAVAYSNRGIVYSEIKNYGSAIEDFAQSIRLSPNN 725
Query: 170 VDA 172
A
Sbjct: 726 ATA 728
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 54/119 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++A + ++ N P+ ++ GLA SA+G+ + A + + A L+P D+ +
Sbjct: 638 GDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVAYSN 697
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ + A+ Q+IR P + + E+ D A E +++ LF
Sbjct: 698 RGIVYSEIKNYGSAIEDFAQSIRLSPNNATAYYSRGIIRRELKDRLGANEDFQKAATLF 756
>gi|348538308|ref|XP_003456634.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Oreochromis niloticus]
Length = 846
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
ASL N EQAI L +V+ ++P + LG H G+ AF +Y + P
Sbjct: 558 ASLYELLENPEQAIEWLMQVISVTPTDAQALAKLGELHDGEGDKSQAFQYYYESFRYFPS 617
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + L + ++ +A+ Y +A +P + ++ +AS Y G+ +KA E+Y+
Sbjct: 618 NIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNSQKALETYK 677
Query: 161 QIQKLFPDNVD 171
+I + FP+NV+
Sbjct: 678 EIHRKFPENVE 688
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 106/289 (36%), Gaps = 67/289 (23%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A KE +R + E LGL + L + A D ++ + S + QL
Sbjct: 499 YEKAAEFYKEALRNDSSCTEGLYNLGLTYKRLNRLEEALDCFLKLHAILRNSSQVMYQLA 558
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ + QA+ ++ Q I P D L + GD +A + Y + + FP N
Sbjct: 559 SLYELLENPEQAIEWLMQVISVTPTDAQALAKLGELHDGEGDKSQAFQYYYESFRYFPSN 618
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
+D VI+ L A +E EK +Q+
Sbjct: 619 ID------------------------------------VIEWLGAYYIETQFCEKAIQYF 642
Query: 230 EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA-----EI----------------LFA 268
E A +++ + +K ++ CY R GN +KA EI L
Sbjct: 643 ERATLIQPT----QVKWQLMVASCYRRSGNSQKALETYKEIHRKFPENVECLRFLVRLCT 698
Query: 269 DLQWKNAIDHA------DLITEVADTLMSLGHSNSALKYYHFLETNAGT 311
D+Q K D+A + + E+ + + G SA E++AG+
Sbjct: 699 DMQLKEVQDYATKLKKVEKMKEIREQRIKSGREGSARSRREGRESSAGS 747
>gi|242076856|ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
gi|241939547|gb|EES12692.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
Length = 1069
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 142/308 (46%), Gaps = 41/308 (13%)
Query: 115 KGDTAQAMYYIRQAIR--AEPKDISL-RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
KGD A Y ++ ++P+D L I L ++ GD + + S+E++ ++ P+N +
Sbjct: 328 KGDIETAGRYYMASVNEISKPQDFVLPYIGLGQIQLKFGDLKSSLGSFEKVLEVHPENCE 387
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
+ K + K G+T ++I ++ ++ P D V L +L+E++ + +++++
Sbjct: 388 SLKAIGHIHAKSGETEKAIETFKKVTRIDPKDHQAFV--ELGELLVESD-WAAAMEYLKT 444
Query: 232 AQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF----ADLQWKNAIDHADLITEVA 286
A+ +++ +G+ +P++L G+ + G E AE F D W + +D +V
Sbjct: 445 ARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQSFKEALGDGLWVSVMD-----GKVG 499
Query: 287 DTLMSLGHSNSALKYYHFLETNA--------GTDNGYLYLKLAECYLSLKERAHAIMFFY 338
++++ N ++H LE + Y +L E L + A +F+
Sbjct: 500 SSMVNWSVQNKDQSFFHQLEEEGVPLELHSIKVTTLFNYARLLE---ELHDSVRASLFYR 556
Query: 339 KALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD-----------SLDMNSDKS 387
+ ++ D IDA L LA++ + + +I L+ +D SL++ SD++
Sbjct: 557 FIIFKYPDYIDAYLRLAAIAKQRNNVQLSIELIGDALKIDEKNPNALSMLGSLELQSDET 616
Query: 388 NPWWLNEK 395
WL K
Sbjct: 617 ---WLTAK 621
>gi|423062508|ref|ZP_17051298.1| sulfotransferase [Arthrospira platensis C1]
gi|406716416|gb|EKD11567.1| sulfotransferase [Arthrospira platensis C1]
Length = 714
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 149/348 (42%), Gaps = 26/348 (7%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
L+P K++G +++ G F+QA + K+ + + PN E Y LG + + +SA +
Sbjct: 42 LAPAY-KIIG--TVEQLQGEFDQAEASYKKALEIEPNFAEVYANLGSLFAQKNDWQSAIN 98
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL--RIHLASFYV 147
Y A + P +++ L Q +A Y +AI EP++++L + +A
Sbjct: 99 CYEKAIEIKPDFGGVYRNLAKVFGQINQQDKANYCWLKAINIEPQNVNLPEYLEVAKALD 158
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
G + +A Y + ++P+ + + + F+ C Q +I ++ L++ P DL
Sbjct: 159 NQGKFPQAIAIYAKAMAIYPNVAEISYNLGETFVNCEQWESAINAYKQALEIDP---DLY 215
Query: 208 -VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EKAE 264
V L + E Y+ + + LKLK + +LG + ++ +
Sbjct: 216 YVYSRLGDVFTEQKNYQDAIAAYQEC-----------LKLKPDIDWTHFKLGEICQKQGD 264
Query: 265 ILFADLQWKNAIDHADLIT----EVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKL 320
I A ++ I +T ++ + L L Y L N + ++ KL
Sbjct: 265 IKQAIAAYQKGITIQPKLTWPYLKLLELLNHLESWQEIFSNYKELLNNHPDKSAIIHQKL 324
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
AE + K+ AI F KAL+ + DA L LA + L + K +AI
Sbjct: 325 AEAAVRFKKWNQAIKNFQKALEIDPECFDACLQLAQIFLRQGKPIKAI 372
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
++ +A+ A F +AI+ K + PNL Y +G G A Y A
Sbjct: 11 QLYQQANTYLAQQQFSEAIASCKTALEYHPNLAPAYKIIGTVEQLQGEFDQAEASYKKAL 70
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ P + ++ L + QK D A+ +AI +P + +LA + +I +KA
Sbjct: 71 EIEPNFAEVYANLGSLFAQKNDWQSAINCYEKAIEIKPDFGGVYRNLAKVFGQINQQDKA 130
Query: 156 AESYEQIQKLFPDNVDATK--TGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+ + + P NV+ + A+ G+ ++I I + + ++P+ A++S
Sbjct: 131 NYCWLKAINIEPQNVNLPEYLEVAKALDNQGKFPQAIAIYAKAMAIYPNVAEIS 184
>gi|376001676|ref|ZP_09779536.1| putative sulfotransferase [Arthrospira sp. PCC 8005]
gi|375329944|emb|CCE15289.1| putative sulfotransferase [Arthrospira sp. PCC 8005]
Length = 716
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 150/348 (43%), Gaps = 26/348 (7%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
L+P K++G +++ G F+QA + K+ + + PN E Y LG + + +SA +
Sbjct: 44 LAPAY-KIIG--TVEQLQGEFDQAEASYKKALEIEPNFAEVYANLGSLFAQKNDWQSAIN 100
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL--RIHLASFYV 147
Y A + P +++ L Q +A Y +AI EP++++L + +A
Sbjct: 101 CYEKAIEIKPDFGGVYRNLAKVFGQINQQDKANYCWLKAINIEPQNVNLPEYLEVAKALD 160
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
G + +A Y + ++P+ + + + F+ C Q +I ++ L++ P DL
Sbjct: 161 NQGKFPQAIAIYAKAMAIYPNVAEISYNLGETFVNCEQWESAINAYKQALEIDP---DLY 217
Query: 208 -VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EKAE 264
V L + E Y+ + + + LKLK + +LG + ++ +
Sbjct: 218 YVYSRLGDVFTEQKNYQDAI-----------AAYQECLKLKPDIDWTHFKLGEICQKQGD 266
Query: 265 ILFADLQWKNAIDHADLIT----EVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKL 320
I A ++ I +T ++ + L L Y L N ++ +Y KL
Sbjct: 267 IKQAIAAYQKGITIQPKLTWPYLKLLELLNHLESWQEIFSNYKELLNNHPDNSAIIYQKL 326
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
AE + + AI + KAL+ + DA L LA + L + K +AI
Sbjct: 327 AEVAVRFNKWNQAIKNYQKALEIDPECFDACLQLAQIFLRQGKPIKAI 374
>gi|197116999|ref|YP_002137426.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197086359|gb|ACH37630.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 645
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 129/314 (41%), Gaps = 15/314 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN + AIS +E + L P LGL H G + A +AA L D
Sbjct: 78 GNVDAAISEYRETLSLDPEFYPASGNLGLLHLQKGAGEEAA--VELAAGLKAGDPRYHAG 135
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L K A+++ +AI A P D +L +A+ Y G +KA ++Y + L P
Sbjct: 136 LARVMADKQMHLLAIFHYNEAIAAFPDDAALYTGIAASYNAAGQKQKAEDAYRRALVLQP 195
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA----YE 223
DN A L L+ G+ +++ L+ P++ + + L A + +A YE
Sbjct: 196 DNAQARFGLGALLLERGEADKAVSELKLAAIAQPANKETHRL-LAEAYARKGDAKSADYE 254
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLIT 283
+ L I KELP K+ A RL + I L+ + D A
Sbjct: 255 RGLAGIGS------KPKELP-KVDHMALAEKHRLAKEYEMAISEYRLRLADEPDDAVAQQ 307
Query: 284 EVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
+ DTL+++G + A+ YY N +N L+ LA Y A++ + + L
Sbjct: 308 RLGDTLLAVGREDEAMSYYRDALRNK-AENPELHFNLAGIYERKALLDEAVVEYRQVLAS 366
Query: 344 FEDNIDARLTLASL 357
DN AR LA +
Sbjct: 367 SPDNQQARQRLADI 380
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 251 GICYLRLGNMEKAEI-LFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNA 309
G+ +L+ G E+A + L A L+ + HA L +AD M L L +H+ E A
Sbjct: 105 GLLHLQKGAGEEAAVELAAGLKAGDPRYHAGLARVMADKQMHL------LAIFHYNEAIA 158
Query: 310 G-TDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
D+ LY +A Y + ++ A + +AL DN AR L +LLLE + ++A+
Sbjct: 159 AFPDDAALYTGIAASYNAAGQKQKAEDAYRRALVLQPDNAQARFGLGALLLERGEADKAV 218
Query: 369 TLL 371
+ L
Sbjct: 219 SEL 221
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P D+ ++L + G +AM Y R A+R + ++ L +LA Y ++A
Sbjct: 300 PDDAVAQQRLGDTLLAVGREDEAMSYYRDALRNKAENPELHFNLAGIYERKALLDEAVVE 359
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
Y Q+ PDN A + A ++ G +++ + +K +P+D L +
Sbjct: 360 YRQVLASSPDNQQARQRLADIYTLRGSFNQALEQYQALIKTNPADPALRL 409
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 17/254 (6%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPET-YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
A G ++A+S ++ +R PE +N G+ ++ ++ + A SP +
Sbjct: 315 AVGREDEAMSYYRDALRNKAENPELHFNLAGIYERKALLDEAVVEYRQVLAS-SPDNQQA 373
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
++L +G QA+ + I+ P D +LR+ LA YV + + AAE+Y K
Sbjct: 374 RQRLADIYTLRGSFNQALEQYQALIKTNPADPALRLKLARAYVNSKELDAAAEAYHAAIK 433
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L ++VDA + A L K + +E L++ D ++ L AI ++N Y+
Sbjct: 434 LDGESVDAHRELANLQRKRNMIDEAAAEYQEVLRLKKDDQEVRTA--LTAIYVKNKNYDA 491
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI----DHAD 280
+ ++ + S KL G+ Y + + A Q+K A+ DHA
Sbjct: 492 LAKLLKDGVDLSPSDPNAHYKL----GLVYEFQKDYDAATA-----QYKEAVTLKPDHAK 542
Query: 281 LITEVADTLMSLGH 294
+ + M GH
Sbjct: 543 ALNAMGRVQMKDGH 556
>gi|409994049|ref|ZP_11277171.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
platensis str. Paraca]
gi|206585491|gb|ACI15551.1| serine/threonine protein kinase [Arthrospira platensis S6]
gi|409935123|gb|EKN76665.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
platensis str. Paraca]
Length = 732
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL P + SL Y G+F AI+ L +V+RL+P + + GLAH N+++A
Sbjct: 405 KLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQENYEAA 464
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y P S ++ + V+ G+ M +AIR P+ + +
Sbjct: 465 ILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRGRARF 524
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+GDY+ A Y Q+ PDN +A ++ G +I ++++P+ D
Sbjct: 525 HLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMD 582
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N++ AI + + L PN + ++ GL HS ++++A Y A L+P D+ +
Sbjct: 595 NYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNR 654
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ G+ +QA+ QAIR P +GD A +EQ KLF
Sbjct: 655 AQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQAGKLF 712
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E AI ++L P+ E + A+ L ++ A Y A L P + ++
Sbjct: 357 GDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 416
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
Q GD A+ + Q IR P+D + +YE A Y ++ + P
Sbjct: 417 RSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQENYEAAILDYTEVIRRQP 476
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ +A + +K G + E ++++P A
Sbjct: 477 DHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSA 513
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+++ A++ +V+ P+ E Y + LGN+++A + + L+P +
Sbjct: 527 GDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMDYNNR 586
Query: 108 LLTF-AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ + VQ D A + +AI EP + + + DYE A Y Q L
Sbjct: 587 CIAYLNVQNYDAA--IGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 644
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
P++ ++ AQ + G +++I + +++ P+
Sbjct: 645 PNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPN 680
>gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira
platensis NIES-39]
Length = 732
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL P + SL Y G+F AI+ L +V+RL+P + + GLAH N+++A
Sbjct: 405 KLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQENYEAA 464
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y P S ++ + V+ G+ M +AIR P+ + +
Sbjct: 465 ILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRGRARF 524
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+GDY+ A Y Q+ PDN +A ++ G +I ++++P+ D
Sbjct: 525 HLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMD 582
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N++ AI + + L PN + ++ GL HS ++++A Y A L+P D+ +
Sbjct: 595 NYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNR 654
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ G+ +QA+ QAIR P +GD A +EQ KLF
Sbjct: 655 AQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQAGKLF 712
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E AI ++L P+ E + A+ L ++ A Y A L P + ++
Sbjct: 357 GDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 416
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
Q GD A+ + Q IR P+D + +YE A Y ++ + P
Sbjct: 417 RSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQENYEAAILDYTEVIRRQP 476
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ +A + +K G + E ++++P A
Sbjct: 477 DHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSA 513
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+++ A++ +V+ P+ E Y + LGN+++A + + L+P +
Sbjct: 527 GDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMDYNNR 586
Query: 108 LLTF-AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ + VQ D A + +AI EP + + + DYE A Y Q L
Sbjct: 587 CIAYLNVQNYDAA--IGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 644
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
P++ ++ AQ + G +++I + +++ P+
Sbjct: 645 PNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPN 680
>gi|187934587|ref|YP_001885851.1| hypothetical protein CLL_A1657 [Clostridium botulinum B str. Eklund
17B]
gi|187722740|gb|ACD23961.1| tetratricopeptide repeat protein [Clostridium botulinum B str. Eklund
17B]
Length = 1094
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 15/303 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHS-ALGNHKSAFDFYVIAAHLSPKDSALWK 106
G++E+ I L++ + + + YNT+G+ ++ L ++++A ++ A + ++ +
Sbjct: 734 GDYEKKIEYLEKQMEFNNDYEYFYNTIGVTYAYDLNDYENAIKYFSKTAAIDKENDYAFV 793
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV-EIGDYEKAAESYEQIQKL 165
L D +A+ + + + + L + Y ++ DY KA E+Y+ + KL
Sbjct: 794 NLGYCYGLLEDYTKAIECYTRGLEITGGNEYIYNQLGNLYENDLNDYNKAIENYKNVMKL 853
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-SVIDLLVAILMENNAYEK 224
P++ + A + K + S+ E+ ++ A L + I +L I EN YEK
Sbjct: 854 NPEDRNGYSDIANCYRKLEDYSESLTYYEKQIEATGKTAYLYNCIGVLYEIRFEN--YEK 911
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+++ + A + K+ + G CY + + + I + Q K D + E
Sbjct: 912 AIENYKKAVELDPEHKDAYKNI----GDCYEKAWDNHEEAIKYYKKQEKYLDDTRKISLE 967
Query: 285 VADTLMSLGHSNSALKYY-----HFLE-TNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
+AD+ LG + SA YY ++LE G ++ Y +A CY + A F+
Sbjct: 968 IADSYDQLGKTESAKNYYRKALEYYLELIEDGEEHACTYKSVARCYSKTGDNDKAYEFYI 1027
Query: 339 KAL 341
KA+
Sbjct: 1028 KAI 1030
>gi|39998281|ref|NP_954232.1| hypothetical protein GSU3191 [Geobacter sulfurreducens PCA]
gi|409913632|ref|YP_006892097.1| hypothetical protein KN400_3128 [Geobacter sulfurreducens KN400]
gi|39985227|gb|AAR36582.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298507217|gb|ADI85940.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 638
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 156/379 (41%), Gaps = 83/379 (21%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+QA++ +E +R+ P+ P+ +LGLA A G+ A + L+ + Q L
Sbjct: 78 FDQAVTEYRETLRMDPSFPDAQGSLGLALLAKGSADEAV--VELTRALAEDSKPRYHQGL 135
Query: 110 --TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
FA ++ + A+Y+ +A+R P D S+R+ LA Y + G E+A + ++ + P
Sbjct: 136 GKIFA-ERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAP 194
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN------NA 221
N +A A L+L G+T G ++E + ++ I LL+A E
Sbjct: 195 ANENARLALASLYLADGRTE---GAVQELKQAQLANPGNRGIHLLLAEAYEKLGDRKAAE 251
Query: 222 YEKTLQHIEHAQIV---------RFSGKELP---------LK------------------ 245
YE TL + + R + KE P LK
Sbjct: 252 YEYTLSGRQRGVLPEEYLRRGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQAA 311
Query: 246 --------------LKVKAG---------ICYLRLGNMEKAEILFADLQWKNAI----DH 278
L+VK G I Y R G +++A + ++K A+ +H
Sbjct: 312 AGLDDDAIASYRELLRVKPGNAANHYNLGIIYERKGLIDEAVV-----EYKQAVRLSAEH 366
Query: 279 ADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
D +AD G A++ Y L G N L+LKLA ++S K AI +
Sbjct: 367 GDARRRLADIYTLRGSHPQAIEQYREL-LKRGDSNPVLHLKLARGFMSSKNTKDAIASYN 425
Query: 339 KALDRFEDNIDARLTLASL 357
+AL DN++A LA++
Sbjct: 426 EALKLDPDNLEAHRELAAV 444
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 29 KLSPGVTKMLGEAS-LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K PG ++L + S Q A G + AI+ +E++R+ P + LG+ + G A
Sbjct: 293 KERPGSAEVLHKLSGAQAAAGLDDDAIASYRELLRVKPGNAANHYNLGIIYERKGLIDEA 352
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y A LS + ++L +G QA+ R+ ++ + L + LA ++
Sbjct: 353 VVEYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSNPVLHLKLARGFM 412
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+ + A SY + KL PDN++A + A ++ K Q + E L++ DA+
Sbjct: 413 SSKNTKDAIASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAE-- 470
Query: 208 VIDLLVAILMENNAYEK 224
++L AI ++ Y++
Sbjct: 471 ARNILTAIYVKEKKYDE 487
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 74/157 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A+ K+ VRLS + L ++ G+H A + Y + L +
Sbjct: 347 GLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSNPVLHLK 406
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +T A+ +A++ +P ++ LA+ Y ++ + A++ Y ++ ++
Sbjct: 407 LARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKK 466
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ +A +++K + + +L+E +++ P+DA
Sbjct: 467 DDAEARNILTAIYVKEKKYDELVPLLQEGVELAPNDA 503
>gi|209523077|ref|ZP_03271634.1| sulfotransferase [Arthrospira maxima CS-328]
gi|209496664|gb|EDZ96962.1| sulfotransferase [Arthrospira maxima CS-328]
Length = 714
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 26/348 (7%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
L+P K++G +++ G F+QA + K+ + + PN E Y LG + + +SA +
Sbjct: 42 LAPAY-KIIG--TVEQLQGEFDQAEASYKKALEIEPNFAEVYANLGSLFAQKNDWQSAIN 98
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL--RIHLASFYV 147
Y A + P +++ L Q +A Y +AI EP++++L + +A
Sbjct: 99 CYEKAIEIKPDFGGVYRNLAKVFGQINQQDKANYCWLKAINIEPQNVNLPEYLEVAKALD 158
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
G + +A Y + ++P+ + + + F+ C Q +I ++ L++ P DL
Sbjct: 159 NQGKFPQAIAIYAKAMAIYPNVAEISYNLGETFVNCEQWESAINAYKQALEIDP---DLY 215
Query: 208 -VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EKAE 264
V L + E Y+ + + LKLK L+LG + ++ +
Sbjct: 216 YVYSRLGDVFTEQKNYQDAIAAYQEC-----------LKLKPDIDWINLKLGEICQKQGD 264
Query: 265 ILFADLQWKNAIDHADLITEVADTLMSLGHSNSALK----YYHFLETNAGTDNGYLYLKL 320
I A ++ I +T L+ L + + + Y L N + ++ KL
Sbjct: 265 IKQAIAAYQKGITIQPKLTWPYLKLLELLNHLESWQEIFSNYKELLNNHPDKSAIIHQKL 324
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
AE + K+ AI F KAL+ + DA L LA + L + K +AI
Sbjct: 325 AEAAVRFKKWNQAIKNFQKALEIDPECFDACLQLAQIFLRQGKPIKAI 372
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
++ +A+ A F +AI+ K + PNL Y +G G A Y A
Sbjct: 11 QLYQQANTYLAQQQFSEAIASCKTALEYHPNLAPAYKIIGTVEQLQGEFDQAEASYKKAL 70
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ P + ++ L + QK D A+ +AI +P + +LA + +I +KA
Sbjct: 71 EIEPNFAEVYANLGSLFAQKNDWQSAINCYEKAIEIKPDFGGVYRNLAKVFGQINQQDKA 130
Query: 156 AESYEQIQKLFPDNVDATK--TGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+ + + P NV+ + A+ G+ ++I I + + ++P+ A++S
Sbjct: 131 NYCWLKAINIEPQNVNLPEYLEVAKALDNQGKFPQAIAIYAKAMAIYPNVAEIS 184
>gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099]
gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099]
Length = 551
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI+ L + + L P+ E Y G+A S GN + A Y A L+P D+ +
Sbjct: 109 GDYDRAITYLDQAIFLDPDNAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAYHN 168
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+KGD +A+ QAI +PK+ S + + GD ++A Y Q+ L
Sbjct: 169 RGLNWARKGDKERAIADYSQAISLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIILDT 228
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
N A ++ + G +R+I + + + P+D
Sbjct: 229 KNAHAYYRRGLIWSRKGDDSRAIADYSQVISLDPTD 264
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 29 KLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL+PG + L +A G+ E+AI+ + + L P +YN G A + G+ A
Sbjct: 157 KLNPGDARAYHNRGLNWARKGDKERAIADYSQAISLDPKNASSYNNRGDAWDSKGDDDRA 216
Query: 88 FDFYVIAAHLSPKDS-ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
Y L K++ A +++ L ++ +KGD ++A+ Q I +P D S+R + +
Sbjct: 217 MADYNQVIILDTKNAHAYYRRGLIWS-RKGDDSRAIADYSQVISLDPTDPSIRYNKGLAW 275
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ GD ++A +++ +L P A +L+ G R+I E + + P++A +
Sbjct: 276 LRKGDGDRAIADFDEAIRLDPKMAAAYYDRGTEWLRKGDRDRAITDYSEVITLEPTNA-M 334
Query: 207 SVIDLLVAILMENNAYEKTLQHIEHA 232
++ D +L E YE+ L + A
Sbjct: 335 ALNDRGF-VLNELGEYERALADLNRA 359
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Query: 30 LSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
L P + + ++Y GN E+AI+ ++L+P Y+ GL + G+ + A
Sbjct: 124 LDPDNAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAYHNRGLNWARKGDKERAI 183
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
Y A L PK+++ + KGD +AM Q I + K+ +
Sbjct: 184 ADYSQAISLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSR 243
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
GD +A Y Q+ L P + +L+ G R+I +E +++ P
Sbjct: 244 KGDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDP 296
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++A++ +V+ L Y GL S G+ A Y L P D ++
Sbjct: 211 GDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYN 270
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++KGD +A+ +AIR +PK + + ++ GD ++A Y ++ L P
Sbjct: 271 KGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGTEWLRKGDRDRAITDYSEVITLEP 330
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
N A + + G+ R++ L + + P A
Sbjct: 331 TNAMALNDRGFVLNELGEYERALADLNRAIGLDPKQA 367
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%)
Query: 55 SLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQ 114
+++++ S N Y A G++ AF Y A ++P+ SA + V
Sbjct: 48 AIIEDKAEASDNRAAAYFNRAGALIRRGDNDDAFADYDKAIGINPELSAAYYNNGIILVL 107
Query: 115 KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATK 174
KGD +A+ Y+ QAI +P + + + G+ E+A Y+ KL P + A
Sbjct: 108 KGDYDRAITYLDQAIFLDPDNAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAYH 167
Query: 175 TGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ + G R+I + + + P +A
Sbjct: 168 NRGLNWARKGDKERAIADYSQAISLDPKNA 197
>gi|124002602|ref|ZP_01687454.1| tetratricopeptide repeat family protein, putative [Microscilla
marina ATCC 23134]
gi|123991830|gb|EAY31217.1| tetratricopeptide repeat family protein, putative [Microscilla
marina ATCC 23134]
Length = 361
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + AI + +RL P+ P YN G +++ L ++ A Y L P +AL+
Sbjct: 160 GEYALAIKDFTQAIRLKPDDPWHYNDRGNSYNYLKRYEEALKDYFKGISLDPNIAALYGN 219
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G+ QA +YI AI +P D + + LA Y+ G YEKA + + + LF
Sbjct: 220 VGDVYFSLGNLEQATHYIELAINKDPHDATYKAILAEIYLCAGGYEKAWQMMMRNRTLFD 279
Query: 168 DNVDATKTGA-QLFLKC--GQTARSIGILEEYLKV 199
++ A T QL L C G T ++I LE+ L +
Sbjct: 280 ESAYALATDILQLVLACILGHT-QAIDALEKRLYI 313
>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 1491
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A++ +V+ L P+ + ++ G+ LG HK A + L P DS+ W
Sbjct: 700 GRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFN 759
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ Q I +P D S + E+G +++A SY+Q+ L P
Sbjct: 760 RGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQP 819
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
D A + + G+ ++ ++ + + P D
Sbjct: 820 DYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDD 855
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++ L + + L P+ +T++ G A LG ++ A + A L P DS+ W
Sbjct: 258 GRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSAWNN 317
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ Q I +P D L E+G E+A S++Q+ L P
Sbjct: 318 RGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVISLQP 377
Query: 168 DNVDATKT-GAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
D A GA LF K G+ ++ ++ + + P D A L + YE+ L
Sbjct: 378 DYYPAWDNRGAALF-KLGRYEEALANFDQVISLQPD--YYPAWDNRGAALFKLGRYEEAL 434
Query: 227 QHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ + Q++ P G +LG E+A
Sbjct: 435 ANFD--QVISLQPDYYP--AWDNRGAALFKLGRNEEA 467
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 4/186 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ +V+ L P+ ++ G+ LG ++ A + A L P S+ W
Sbjct: 496 GRNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEALANFDQAISLQPDYSSAWNN 555
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ QAI +P D ++G +E+A +++Q+ L P
Sbjct: 556 RGAALFKLGRHEEALTNFDQAISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQP 615
Query: 168 DNVDAT-KTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
D+ A K G LF K G+ ++ ++ + + P D+ S D +L E +E+ L
Sbjct: 616 DDYHAWFKRGVALF-KLGRHEEALTNFDQVISLQPDDS--SAWDNRGVVLGELGRHEEAL 672
Query: 227 QHIEHA 232
+ + A
Sbjct: 673 ANFDQA 678
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S + G + Y G +E+A++ + + L P+ ++ G LG HK
Sbjct: 168 SNSSTVSGAEFWFNQGVTLYELGRYEEALAKFDQAISLQPDYYHPWDNRGGVLIKLGRHK 227
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A + A L P W+ G +A+ + QAI +P + +
Sbjct: 228 EALASFDRAISLQPDYYQAWRGRGVVLGMLGRHKEALANLDQAISLQPDFYKTWDNRGAA 287
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
E+G YE+A +++Q L PD+ A + K G+ ++ ++ + + P D
Sbjct: 288 LGELGRYEEALANFDQAISLQPDDSSAWNNRGVVLFKLGRNEEALASFDQVISLQPDD 345
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ +V+ L P+ + G+A LG H+ A + L P DS+ W
Sbjct: 598 GRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDSSAWDN 657
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ QAI +P + + ++G YE+A +++Q+ L P
Sbjct: 658 RGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQVISLQP 717
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D A + + G+ ++ ++ + + P D+
Sbjct: 718 DYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDS 754
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ + + L P+ +T++ G A LG ++ A + L P W
Sbjct: 666 GRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQVISLQPDYYQAWDN 725
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ Q I +P D S + E+G YE+A SY+Q+ L P
Sbjct: 726 RGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQP 785
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D+ A L + G+ ++ ++ + + P
Sbjct: 786 DDSSAWFNRGVLLGELGRHKEALTSYDQVISLQP 819
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A++ + + L P+ ++ G+A LG H+ A + A L P W
Sbjct: 870 GRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDYYPAWDN 929
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ G +A+ QAI +P E+G YE+A +++Q L P
Sbjct: 930 RGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQP 989
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D + +K G+ ++ L++ + + P
Sbjct: 990 DYYQTWDNRGLVLIKLGRYEEALANLDQAISLQP 1023
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 66/157 (42%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+ G E+A++ + + L P+ +N G A LG H+ A + A L P D
Sbjct: 527 FELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQPDDYHA 586
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W + + G +A+ Q I +P D ++G +E+A +++Q+
Sbjct: 587 WFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVIS 646
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
L PD+ A + + G+ ++ ++ + + P
Sbjct: 647 LQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQP 683
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 68/156 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A++ + + L P+ + + G+A S LG ++ A + A L P W
Sbjct: 938 GRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQPDYYQTWDN 997
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ G +A+ + QAI +P + ++ +G Y +A S +Q+ L P
Sbjct: 998 RGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSDDQVISLQP 1057
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
D+ A + G+ ++ ++ + + P D
Sbjct: 1058 DDYQAWHNRGAALGELGRYEEALANFDQAISLRPDD 1093
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 6/216 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A++ +V+ L P+ ++ G A LG ++ A + L P W
Sbjct: 394 GRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDN 453
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ Q I +P D E+G E+A S++Q+ L P
Sbjct: 454 RGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQP 513
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D A + + G+ ++ ++ + + P + S + A L + +E+ L
Sbjct: 514 DYYPAWDNRGVVLFELGRNEEALANFDQAISLQPDYS--SAWNNRGAALFKLGRHEEALT 571
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ + A S + K G+ +LG E+A
Sbjct: 572 NFDQA----ISLQPDDYHAWFKRGVALFKLGRHEEA 603
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ +V+ L P+ + LG+A LG ++ A + L P W
Sbjct: 326 GRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVISLQPDYYPAWDN 385
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ Q I +P + + ++G YE+A +++Q+ L P
Sbjct: 386 RGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQP 445
Query: 168 DNVDATKT-GAQLFLKCGQTARSIGILEEYLKVHPSD 203
D A GA LF K G+ ++ ++ + + P D
Sbjct: 446 DYYPAWDNRGAALF-KLGRNEEALASFDQVISLQPDD 481
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ + + L P+ + G+A LG H+ A + L P D W +
Sbjct: 564 GRHEEALTNFDQAISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFK 623
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ Q I +P D S + E+G +E+A +++Q L P
Sbjct: 624 RGVALFKLGRHEEALTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQP 683
Query: 168 DNVDATKT-GAQLFLKCGQTARSIGILEEYLKVHP 201
D GA LF K G+ ++ ++ + + P
Sbjct: 684 DYYQTWDNRGAALF-KLGRYEEALANFDQVISLQP 717
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++ +V+ L P+ ++ G+ LG HK A + L P D W +
Sbjct: 802 GRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDDYHAWFK 861
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ QAI +P + E+G +E+A +++Q L P
Sbjct: 862 RGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQP 921
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D A + +K G+ ++ ++ + + P
Sbjct: 922 DYYPAWDNRGVMLIKLGRYEEALANFDQAISLQP 955
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 66/157 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ +V+ L P+ ++ G+ LG H+ A + A L P W
Sbjct: 632 GRHEEALTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDN 691
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ Q I +P + E+G +++A +++Q+ L P
Sbjct: 692 RGAALFKLGRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQP 751
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ A L + G+ ++ ++ + + P D+
Sbjct: 752 DDSSAWFNRGVLLGELGRYEEALTSYDQVISLQPDDS 788
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ +V+ L P+ + G+A LG ++ A + L P W
Sbjct: 462 GRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDN 521
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ QAI +P S + + ++G +E+A +++Q L P
Sbjct: 522 RGVVLFELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQP 581
Query: 168 DNVDAT-KTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
D+ A K G LF K G+ ++ ++ + + P D
Sbjct: 582 DDYHAWFKRGVALF-KLGRHEEALTNFDQVISLQPDD 617
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 8/217 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++ + L P+ + + G+ LG HK A A L P W
Sbjct: 224 GRHKEALASFDRAISLQPDYYQAWRGRGVVLGMLGRHKEALANLDQAISLQPDFYKTWDN 283
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ QAI +P D S + ++G E+A S++Q+ L P
Sbjct: 284 RGAALGELGRYEEALANFDQAISLQPDDSSAWNNRGVVLFKLGRNEEALASFDQVISLQP 343
Query: 168 DNVDAT-KTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
D+ A K G L + G+ ++ ++ + + P D A L + YE+ L
Sbjct: 344 DDYHAWFKLGVALG-ELGRNEEALASFDQVISLQPD--YYPAWDNRGAALFKLGRYEEAL 400
Query: 227 QHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ + Q++ P G +LG E+A
Sbjct: 401 ANFD--QVISLQPDYYP--AWDNRGAALFKLGRYEEA 433
>gi|354566048|ref|ZP_08985221.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353546556|gb|EHC16004.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 357
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ A+ E ++L+PNL E Y LGLA G +A Y A ++P + L
Sbjct: 96 FDAAVQEYAEAIKLNPNLGEAYYNLGLALHKRGQADAAITAYRQALIINPTMANAQYNLG 155
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+KG +A+ +QAI + + +LA E G E+A +Y Q KL PDN
Sbjct: 156 LALYEKGQANEAIAAYQQAINLNSNNANAYFNLAIALQEQGKLEEAIAAYRQTLKLNPDN 215
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
A L GQT+ ++ + +K P++A+
Sbjct: 216 AVAYNNMGSLLTIQGQTSEAVATYQTAIKRIPNNAE 251
>gi|386002402|ref|YP_005920701.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
gi|357210458|gb|AET65078.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
Length = 1348
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +++AI E +RL P +N+ G A + GN+ A Y A L P+
Sbjct: 139 YLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYDEAIKAYNEAIRLDPEFMWP 198
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W+ +G A+Y +AIR P+D++ I+ + +G Y++A + + +
Sbjct: 199 WRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIR 258
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P+NV A G+ +I +E +++ P AD
Sbjct: 259 LDPENVYAWHNKGVALNSQGKYDEAIQAYDEAIRLSPEYAD 299
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G ++AI E +RLSP + +N GL+ + G + A + L P+ A
Sbjct: 343 YNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAA 402
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W +G +A+ +AIR P+ + + Y++A ++Y+++ K
Sbjct: 403 WYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIK 462
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P+ DA + F G+ +I +E ++ +P AD + L+ + YE+
Sbjct: 463 LNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYAD--AWNNKGVALVSLDKYEE 520
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLG 258
+Q + A R + ++ L K G+ + LG
Sbjct: 521 AIQAFDEA--TRLNPEDADAWL--KKGVAFYHLG 550
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y+ GN+++AI E +RL P + G + G ++ A Y A L+P+D
Sbjct: 173 YSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNS 232
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W + G +A+ +AIR +P+++ + G Y++A ++Y++ +
Sbjct: 233 WINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQAYDEAIR 292
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P+ DA + L G+ +I E + + P +A+
Sbjct: 293 LSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENAN 333
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
GEA L G +++AI E + L P +N G+A G A Y A LS
Sbjct: 305 GEALLHQ--GKYDEAIQASNEAISLDPENANGWNIKGVALYNRGKSDEAIKAYDEAIRLS 362
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE------IGDY 152
P+ + W +G +A+ + IR +P+ H+A++Y + G Y
Sbjct: 363 PEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPE------HVAAWYNKGLTLNNQGKY 416
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++A +++++ +L P+ VDA + + +I +E +K++P AD
Sbjct: 417 DEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYAD 469
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y GN+++AI KE +RL P + GLA G + A Y A L P+ +
Sbjct: 71 YLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNEAIRLDPEYANA 130
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W +G +A+ +AIR P+ + G+Y++A ++Y + +
Sbjct: 131 WHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYDEAIKAYNEAIR 190
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
L P+ + + G+ +I +E ++++P D
Sbjct: 191 LDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPED 229
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 20/199 (10%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA--------------- 94
+E+AI E RL+P + + G+A LG +K ++
Sbjct: 518 YEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDLRWNPEDA 577
Query: 95 -AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A LS + + K L + K + A Y +AI P D++ + + +G Y+
Sbjct: 578 NARLSKGIALMLKGLALETLDKYEDAVQAY--DEAISLNPDDVAAWENRGAALYSLGKYD 635
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
+A ++Y+++ +L P++ +A K + S+ L+E ++++P+DA +I
Sbjct: 636 EAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVKALDEAIRLNPNDAGCWLIKSFN 695
Query: 214 AILMENNAYEKTLQHIEHA 232
+++E Y++ + E A
Sbjct: 696 LLIIEK--YDEAINASEEA 712
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 29 KLSP-GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L+P + + + + Y G +++AI E +RL P ++ G+A ++ G + A
Sbjct: 224 RLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEA 283
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS-LRIHLASFY 146
Y A LSP+ + W + + +G +A+ +AI +P++ + I + Y
Sbjct: 284 IQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALY 343
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
G ++A ++Y++ +L P+ DA G+ +I E +++ P
Sbjct: 344 NR-GKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDP 397
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 48/204 (23%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ-- 107
+++AI EV++L+P + +N+ G A ++ G + A + A +P+ + W
Sbjct: 450 YDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNKG 509
Query: 108 --LLTF-----AVQKGDTAQ---------------AMYYIRQ-----------------A 128
L++ A+Q D A A Y++ +
Sbjct: 510 VALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDD 569
Query: 129 IRAEPKDISLRIH------LASFYVEIGD-YEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
+R P+D + R+ L +E D YE A ++Y++ L PD+V A +
Sbjct: 570 LRWNPEDANARLSKGIALMLKGLALETLDKYEDAVQAYDEAISLNPDDVAAWENRGAALY 629
Query: 182 KCGQTARSIGILEEYLKVHPSDAD 205
G+ ++ +E L+++P DA+
Sbjct: 630 SLGKYDEAVQAYDEVLRLNPEDAN 653
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y+ G +++A+ EV+RL+P + G A +L H+ + A L+P D+
Sbjct: 629 YSLGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVKALDEAIRLNPNDAGC 688
Query: 105 W--KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
W K ++K D +A+ +AIRA Y + +YE+I
Sbjct: 689 WLIKSFNLLIIEKYD--EAINASEEAIRA--------------------YNETITTYEEI 726
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
L P+N A+ ++ + G GI+
Sbjct: 727 VSLNPENSTASNIKSRTLIAKGNGWALKGII 757
>gi|301094298|ref|XP_002896255.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
gi|262109650|gb|EEY67702.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
Length = 977
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 21/269 (7%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+L + GN ++I ++ +R++P+ E Y LG A LG+ A FYV A L+P+
Sbjct: 77 GALHFQLGNLSESIFYNQQCIRVAPDFAEAYGNLGNALKELGDVAGAVQFYVRAIKLNPR 136
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L + G T +A+ + AI +P+ + +L + Y G A Y
Sbjct: 137 FGDAYNNLANCYMLLGQTEEAVETYKMAIMLDPRLVDAHSNLGNLYKVQGRLVDAKHCYA 196
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
Q ++ P A A L GQ ++ E +++ P AD L L E+
Sbjct: 197 QAIRVKPSFAIAWSNLAGLLKDDGQLDAAVEHYREAIRLAPDFAD--AYSNLGNALKESG 254
Query: 221 AYEKTLQHIEHAQIVRFSGKELPLKLKVKAG---ICYLRLGNMEKAEILFADLQWKNAI- 276
++ +Q + A +R + G CY G ME A F ++AI
Sbjct: 255 RVDEAIQAYKSALQIR-------PNFAIAHGNLASCYYDAGQMELAIHTF-----RHAIQ 302
Query: 277 ---DHADLITEVADTLMSLGHSNSALKYY 302
+ D + + L GH A+ Y
Sbjct: 303 LEPNFPDAYNNLGNALRECGHLEQAVTCY 331
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ EQA++ + ++L P+ P YN LG A G K A Y AA L P+ +A
Sbjct: 322 GHLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSN 381
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + ++G QA+ + +QAI +P ++ + + ++ E+A + Y +L P
Sbjct: 382 IGSVLKEQGKLDQALAHYQQAITIDPNFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKP 441
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
DA A + G+ +I + L + P D
Sbjct: 442 QFPDAYSNLASAYKDGGRLDDAITCYRKALALRPQFPD 479
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS Y G E AI + ++L PN P+ YN LG A G+ + A Y A L P
Sbjct: 281 ASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGHLEQAVTCYRTALQLKPD 340
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L KG +A++ A R P+ + ++ S E G ++A Y+
Sbjct: 341 HPHAYNNLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQ 400
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Q + P+ DA +F + +I +++ P D
Sbjct: 401 QAITIDPNFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPD 445
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 129/338 (38%), Gaps = 48/338 (14%)
Query: 35 TKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
T + A QYA G +++A+ L +++ + LG H LGN + +
Sbjct: 37 TYLFNLAHQQYAAGYYQEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSESIFYNQQC 96
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
++P + + L + GD A A+ + +AI+ P+ +LA+ Y+ +G E+
Sbjct: 97 IRVAPDFAEAYGNLGNALKELGDVAGAVQFYVRAIKLNPRFGDAYNNLANCYMLLGQTEE 156
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
A E+Y+ L P VDA L+ G+ + + ++V PS A L
Sbjct: 157 AVETYKMAIMLDPRLVDAHSNLGNLYKVQGRLVDAKHCYAQAIRVKPSFA--IAWSNLAG 214
Query: 215 ILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKN 274
+L ++ + ++H A +RL
Sbjct: 215 LLKDDGQLDAAVEHYREA----------------------IRL----------------- 235
Query: 275 AIDHADLITEVADTLMSLGHSNSALKYYHF---LETNAGTDNGYLYLKLAECYLSLKERA 331
A D AD + + + L G + A++ Y + N +G LA CY +
Sbjct: 236 APDFADAYSNLGNALKESGRVDEAIQAYKSALQIRPNFAIAHG----NLASCYYDAGQME 291
Query: 332 HAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
AI F A+ + DA L + L E E+A+T
Sbjct: 292 LAIHTFRHAIQLEPNFPDAYNNLGNALRECGHLEQAVT 329
>gi|118578955|ref|YP_900205.1| hypothetical protein Ppro_0516 [Pelobacter propionicus DSM 2379]
gi|118501665|gb|ABK98147.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 673
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 49 NFEQAISLLKEVVRLSPNLP-ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
+F+++ LKE++ SP+ + Y LG + + G + A Y A H + +S ++
Sbjct: 287 DFQKSEESLKEIIAESPDKAVDAYGKLGDLYRSAGRDREAMAAYREAVHRNSANSDVYLN 346
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + + +A+ +QAIR +P + R+ LA E G Y++A E Y + KL P
Sbjct: 347 LGILHEKMNNLDEAVVAYKQAIRVKPDNADARLRLADIRYERGFYQEAVEQYSEFLKLKP 406
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILMENNA---Y 222
D+ D A++ K +T+ +I + LK P +A+ + L A M + A Y
Sbjct: 407 DSPDIQLKLARILAKKKETSLAIDAYDAVLKSAPDNPEANREIAALYKAKGMNDRAVAHY 466
Query: 223 EKTLQ 227
K L+
Sbjct: 467 RKALE 471
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 136/333 (40%), Gaps = 26/333 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-NHKSAFDFY-VIAAHLSPK-DSAL 104
GN + AI ++ +R +P LGL ++ G N +++ + +AA P+ AL
Sbjct: 77 GNVDGAIKEYRQALRQNPQFTRASGNLGLLYAQTGRNSEASVELSRGLAATSDPRYHKAL 136
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L V A++++ +A D + LA Y+ +GD KA + Y +
Sbjct: 137 GHVLAEMKV----YPLAIHHLSEAGNTLTSDAEVFNDLAGVYLAMGDQGKALDEYGRALN 192
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
P N A A + L+ +++ L++ +P + I L++A + E
Sbjct: 193 ADPGNEKAHTGIASIHLERKDLDKALDELKKGEATNPQN---RTIHLMMAEIYEKKG--- 246
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICY---------LRLGNMEKAEILFADLQWKNA 275
+ + ++ GK L +V G+ L + + +K+E ++ ++
Sbjct: 247 DTRQANYQYLLGGKGKGLA---QVADGVPAAAKSSPAAPLFVPDFQKSEESLKEIIAESP 303
Query: 276 IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIM 335
D ++ D S G A+ Y + + N +YL L + + A++
Sbjct: 304 DKAVDAYGKLGDLYRSAGRDREAMAAYREA-VHRNSANSDVYLNLGILHEKMNNLDEAVV 362
Query: 336 FFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
+ +A+ DN DARL LA + E +EA+
Sbjct: 363 AYKQAIRVKPDNADARLRLADIRYERGFYQEAV 395
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 147/375 (39%), Gaps = 53/375 (14%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
AI L E + E +N L + A+G+ A D Y A + P + + +
Sbjct: 149 AIHHLSEAGNTLTSDAEVFNDLAGVYLAMGDQGKALDEYGRALNADPGNEKAHTGIASIH 208
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD--------------------- 151
+++ D +A+ +++ P++ ++ + +A Y + GD
Sbjct: 209 LERKDLDKALDELKKGEATNPQNRTIHLMMAEIYEKKGDTRQANYQYLLGGKGKGLAQVA 268
Query: 152 -------------------YEKAAESYEQIQKLFPDN-VDATKTGAQLFLKCGQTARSIG 191
++K+ ES ++I PD VDA L+ G+ ++
Sbjct: 269 DGVPAAAKSSPAAPLFVPDFQKSEESLKEIIAESPDKAVDAYGKLGDLYRSAGRDREAMA 328
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILME--NNAYEKTLQHIEHAQIVRFSGKELPLKLKVK 249
E VH + A+ V L + IL E NN E + + Q +R +L++
Sbjct: 329 AYRE--AVHRNSANSDVY-LNLGILHEKMNNLDEAV---VAYKQAIRVKPDNADARLRL- 381
Query: 250 AGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNA 309
A I Y R E E L+ K D D+ ++A L ++ A+ Y + +A
Sbjct: 382 ADIRYERGFYQEAVEQYSEFLKLKP--DSPDIQLKLARILAKKKETSLAIDAYDAVLKSA 439
Query: 310 GTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
DN ++A Y + A+ + KAL+ +D+ D R L SL ++ + +E
Sbjct: 440 -PDNPEANREIAALYKAKGMNDRAVAHYRKALELRKDDADTRSALVSLYVKNRQYDEITE 498
Query: 370 LLSPPKDLDSLDMNS 384
LL +L D N+
Sbjct: 499 LLKGAVELFPEDANN 513
>gi|186684910|ref|YP_001868106.1| hypothetical protein Npun_R4816 [Nostoc punctiforme PCC 73102]
gi|186467362|gb|ACC83163.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 226
Score = 62.8 bits (151), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 91/188 (48%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
+P + ++L E G++ AI++ ++ L P + ++ +G ++ GN+++A
Sbjct: 36 NPQLKQLLEEGRRLVDSGDYSGAIAVYQQAASLDPKNAKIHSGIGYLYAQQGNYQAALTS 95
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y A ++P +S + + GDTA A R+AI+ +++ + LA +G
Sbjct: 96 YRRAIAINPNNSDFYYAVGYIKANLGDTAGAKEGYRRAIQLNRNNVNAYLGLAVTQSRMG 155
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
DY A +Y+Q L +N + ++ + QT ++ +L++ ++ DL +D
Sbjct: 156 DYTAATWAYQQAIDLDKNNAQTYELMGSMYKQRRQTKQANSLLQKARDLYKRRNDLQGVD 215
Query: 211 LLVAILME 218
+ A+L +
Sbjct: 216 RVEAMLRQ 223
>gi|91775742|ref|YP_545498.1| TPR repeat-containing protein [Methylobacillus flagellatus KT]
gi|91709729|gb|ABE49657.1| TPR repeat [Methylobacillus flagellatus KT]
Length = 700
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 9/171 (5%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L Y G +QA+ L+ +R +P + +N LGLA A G +A + L+P DS
Sbjct: 49 LCYQSGRPQQAVELISNAIRFNPGNADQHNNLGLALRACGQLDAAIHHFRQGLALAPGDS 108
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
LW+ L GD A A +A + P+D ++ L S +G+ + A + +
Sbjct: 109 DLWQNLGAAQHAAGDLAAARTAYLEARQRAPQDTDIQAGLCSVLQALGNRAQQAGHFAEA 168
Query: 163 QKLFPDNVDATKTG--------AQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ F D + A + G + GQ A++ L + P DAD
Sbjct: 169 EQHFRDLI-ALQPGNGAWHYNLGNALREQGQAAQAAECYRRALAISPDDAD 218
>gi|322421231|ref|YP_004200454.1| hypothetical protein GM18_3751 [Geobacter sp. M18]
gi|320127618|gb|ADW15178.1| Tetratricopeptide repeat [Geobacter sp. M18]
Length = 636
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 134/322 (41%), Gaps = 31/322 (9%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN + AI +E + L P LG+ H G + A ++ L +
Sbjct: 78 GNIDAAIQEYRETLALDPEFYPASGNLGILHQQKGASEEAA--VELSQGLKTGNPRYHGG 135
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +K A+++ +A+ A P+D SL LA+ Y +G +K + Y + + P
Sbjct: 136 LARILAEKQLHQLAIFHFTEALAAFPEDASLHTDLAASYDAVGQKQKGEDEYRKALAIQP 195
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA----YE 223
N A L L+ G+T +++ L++ P ++ + L L + + YE
Sbjct: 196 GNARARLGFGALLLERGETDKAVNELKQAAIADPGSKEVHRL-LAEGYLRKGDQKSADYE 254
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAG--ICYLRLG----NMEKAEILFADLQWKNAID 277
+ L I KVK G + ++ L N + ++ ++ + + A +
Sbjct: 255 RVLAGITP---------------KVKEGPKVDHMALAEQYRNAKDLDMAISEYRLRLAEE 299
Query: 278 HADLITE--VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIM 335
D + + + D L+++G + A+ YY N G +N L+L LA Y A++
Sbjct: 300 PGDAVAQQRLGDCLLAVGREDEAMSYYRDAIRNKG-ENPQLHLNLAGIYERKALLDEAVV 358
Query: 336 FFYKALDRFEDNIDARLTLASL 357
+ + L DN+ AR LA +
Sbjct: 359 EYRQVLTSTPDNVQARQRLADI 380
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 40/214 (18%)
Query: 30 LSPGVTKM-LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+ PG + LG +L G ++A++ LK+ P E + L + G+ KSA
Sbjct: 193 IQPGNARARLGFGALLLERGETDKAVNELKQAAIADPGSKEVHRLLAEGYLRKGDQKSA- 251
Query: 89 DFYVIAAHLSPK----------------------DSALWKQLLTFAVQKGDTA------- 119
D+ + A ++PK D A+ + L A + GD
Sbjct: 252 DYERVLAGITPKVKEGPKVDHMALAEQYRNAKDLDMAISEYRLRLAEEPGDAVAQQRLGD 311
Query: 120 ---------QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+AM Y R AIR + ++ L ++LA Y ++A Y Q+ PDNV
Sbjct: 312 CLLAVGREDEAMSYYRDAIRNKGENPQLHLNLAGIYERKALLDEAVVEYRQVLTSTPDNV 371
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A + A ++ G +++ +E K++PSDA
Sbjct: 372 QARQRLADIYTLRGSFPQALEQYQELAKMNPSDA 405
>gi|449540272|gb|EMD31266.1| hypothetical protein CERSUDRAFT_145423 [Ceriporiopsis subvermispora
B]
Length = 1023
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
K KKRGRR G LS V ++GE + Y + A+ +++EV+R+ P ++ L
Sbjct: 117 KGKKKRGRRAGPV--LSQQVKALIGEGNQAYVDNDLAGAMRVMQEVIRIEPRAASAWSVL 174
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
H+ G + A ++ AHL D+ W++L +++ G +A+Y + +P
Sbjct: 175 AQCHADRGEPQRALQLRIMGAHLL-HDAEEWERLARQSLEMGHDKEALYCFGKVTSLDPT 233
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+++ A+ G+ A ++ + K P N+
Sbjct: 234 NVNALWDRATLAKSTGELRTARNAFLTLLKRLPHNL 269
>gi|223934537|ref|ZP_03626458.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
gi|223897000|gb|EEF63440.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
Length = 718
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI +RL+PN E +N LG A++ LG A Y A ++ + +
Sbjct: 519 GKPEEAIPYYFSSLRLNPNRAEVHNNLGNAYADLGKLDEAIREYQAALKINTNYAEAYNG 578
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ +KGD A A ++ AIR PK++S +L + Y G ++ AA Y+ + K P
Sbjct: 579 IGISLAKKGDLAGATRWLSDAIRLNPKNVSSHSNLGNVYAMQGKFDLAAIEYKLVLKQNP 638
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D+ A L + G+ +IG LK+ + + + +L +A+L +N ++ Q
Sbjct: 639 DDALTHNNLANLLSEQGKLDEAIGEYRSALKLKADNPEANY-NLGLALLRQNKR-DEARQ 696
Query: 228 HIEHAQIVR 236
H A +R
Sbjct: 697 HFNEALRLR 705
>gi|324503915|gb|ADY41690.1| General transcription factor 3C polypeptide 3, partial [Ascaris
suum]
Length = 978
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 188/447 (42%), Gaps = 74/447 (16%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+NKLS + +LG+A++ YA G ++A+++L EV+R P P+ Y + + +
Sbjct: 233 RNKLSKTLDALLGQANVIYAKGQTKEALTMLLEVIRQEPRSPDAYRLVADIYKEMNQPHK 292
Query: 87 AFDFYVIAAHLSPKDSA-LWKQL--LTFAVQKGDTAQAMYYIRQAIRAEPKD-------- 135
+ + ++AAHL+ + A W +L L +Q+ + A A Y +AIRAEP +
Sbjct: 293 SLQYGLLAAHLNSRTPAEEWVELGNLAHKLQRIEEAAACY--GRAIRAEPSNWKHYEKRI 350
Query: 136 ----------ISLRIHL-------------------------ASFYVEIGDYEKAA---E 157
+++R L A +Y+++ D EKA E
Sbjct: 351 ETLDLIGLRPVAMRTRLMAAQNIDHSSAQVDFDWFQALIKTVAEYYIQMNDEEKAILALE 410
Query: 158 SYEQIQKLFPDNVDAT-KTGAQLFL---KCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
++ + F D+ +T +++ + A+SI L + + +D + +
Sbjct: 411 AFVLRSREFGRKADSQHQTLVGMWMARQRFEDAAKSIFALCQGITALDADGKFA-----M 465
Query: 214 AILMENNAYEKTLQHIEHAQIVRF-SGKELPLKLKVKAGICYLRLGNMEKAEILFADLQW 272
I N Y T+ ++ RF G L ++ +C++RLG + L L
Sbjct: 466 EIKFNNAGY--TVTPFPPRKVHRFVVGNSFSSMLLIRLIVCFIRLGRKDLVPTLVDKLFE 523
Query: 273 KNAIDHAD-LITEVADTLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAECYLSLKER 330
++ + + L ++A ++ A KY H L + +++ ++ + + K+
Sbjct: 524 RDILPEDEPLYVDIARAYQAVECIPHAQKYVEHLLARHCFSESPDVWFLYGQLLSARKKT 583
Query: 331 AHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPW 390
A + + LD ++DAR+ L++L E+A + L D+++ S P
Sbjct: 584 EEATRAYERVLDIQPSHVDARINLSTLQQRLGMAEKAF------ETLRDYDLDAGSSLP- 636
Query: 391 WLNEKIIMKLCHIYRAKGMPEDFVDAI 417
+E+++++ + FV +
Sbjct: 637 --DERLLIRQADFLSQHKRTDQFVRCV 661
>gi|253699259|ref|YP_003020448.1| hypothetical protein GM21_0616 [Geobacter sp. M21]
gi|251774109|gb|ACT16690.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 647
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 129/315 (40%), Gaps = 17/315 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN + AIS +E + L P LGL H G + A +AA L D
Sbjct: 78 GNVDAAISEYRETLSLDPEFYPASGNLGLLHLQKGGGEEAA--VELAAGLKAGDPRYHAG 135
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L K A+++ +AI A P D +L +A+ Y G +KA ++Y + L P
Sbjct: 136 LARVMADKQMHLLAIFHYNEAIAAFPDDAALYTGVAASYNAAGQKQKAEDAYRRAMVLQP 195
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA----YE 223
DN A L L+ G+ +++G L+ P++ + + L A + +A YE
Sbjct: 196 DNAQARFGLGALLLERGEVDKAVGELKLAAIAQPANRETHRL-LAEAYARKGDAKSAHYE 254
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLIT 283
+ L I KELP K+ A RL + I ++ D A
Sbjct: 255 RGLAGI------GTKLKELP-KVDHMALAEKHRLAKDHEMAISEYRMRLAEEPDDALAQQ 307
Query: 284 EVADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALD 342
+ DTL+++G + A+ YY L A T L+ LA Y A++ + + L
Sbjct: 308 RLGDTLLAVGREDEAMSYYRDALRNKAETPE--LHFNLAGIYERKALLDEAVVEYRQVLA 365
Query: 343 RFEDNIDARLTLASL 357
DN AR LA +
Sbjct: 366 SNPDNQHARQRLADI 380
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 251 GICYLRLGNMEKAEI-LFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNA 309
G+ +L+ G E+A + L A L+ + HA L +AD M L L +H+ E A
Sbjct: 105 GLLHLQKGGGEEAAVELAAGLKAGDPRYHAGLARVMADKQMHL------LAIFHYNEAIA 158
Query: 310 G-TDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
D+ LY +A Y + ++ A + +A+ DN AR L +LLLE + ++A+
Sbjct: 159 AFPDDAALYTGVAASYNAAGQKQKAEDAYRRAMVLQPDNAQARFGLGALLLERGEVDKAV 218
Query: 369 TLL 371
L
Sbjct: 219 GEL 221
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%)
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
H +H+ A Y + P D+ ++L + G +AM Y R A+R + +
Sbjct: 279 HRLAKDHEMAISEYRMRLAEEPDDALAQQRLGDTLLAVGREDEAMSYYRDALRNKAETPE 338
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
L +LA Y ++A Y Q+ PDN A + A ++ G +++ + +
Sbjct: 339 LHFNLAGIYERKALLDEAVVEYRQVLASNPDNQHARQRLADIYTLRGSFNQALEQYQALI 398
Query: 198 KVHPSDADLSV 208
K +P+D L +
Sbjct: 399 KTNPADPALQL 409
>gi|357441257|ref|XP_003590906.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479954|gb|AES61157.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 744
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F +A+ KE V+L P+ P+ Y LG + ALG + A Y A P +
Sbjct: 4 GDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQHALQTRPNYGMAYGN 63
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++G A+ + +QAI +P+ + +L + ++G E+A + Y Q L P
Sbjct: 64 LASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLSLQP 123
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
++ A ++++ A + + L V
Sbjct: 124 NHPQALTNLGNIYMEWNMVAAAASYYKATLNV 155
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 63/165 (38%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ Y G + AI K+ + P E YN LG A +G + A Y L P
Sbjct: 65 ASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLSLQPN 124
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
L ++ A A Y + + + +LA Y + G+Y A Y
Sbjct: 125 HPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYADAISCYN 184
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ ++ P D + + G+ + +I + V P+ A+
Sbjct: 185 EVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRPTMAE 229
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI + + L PN P+ LG + +A +Y +++ SA +
Sbjct: 106 GRVEEAIQCYNQCLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNN 165
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + Y EIG A + Y + + P
Sbjct: 166 LAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRP 225
Query: 168 DNVDATKTGAQLFLKCGQTARSI 190
+A A + G ++
Sbjct: 226 TMAEAHANLASAYKDSGHVEAAV 248
>gi|451982186|ref|ZP_21930513.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
gi|451760606|emb|CCQ91795.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
Length = 755
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 159/387 (41%), Gaps = 51/387 (13%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG A+L+ +E+A+ L +R++P +P + LG ++ H A Y+IA L
Sbjct: 127 LGYANLELK--KYEEALEHLTNSLRINPGMPRAHFALGRTYAETDRHTEAIPEYLIALEL 184
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI-------G 150
SP W+ FA+ K + +A+ AI + + L + A Y I G
Sbjct: 185 SPLHPE-WR----FALAK--SMEALSQFDSAISQYKQTLDLNSNFADAYAAIGRIRVATG 237
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
+KA E E ++ P N A + + + G+ ++ +E V P A
Sbjct: 238 QLKKALEPLENALRIDPQNALALEYLGRALSRMGKHREAMLAFKELTFVQPQQA------ 291
Query: 211 LLVAILMENNAYEKTLQHIEHAQIV----------RFSGKELPLKLKVKAGICYLRLGNM 260
+ Y+ +++E Q+V RF L ++ + G LG M
Sbjct: 292 --------KSHYQLGREYLELGQLVNARESFENALRFDSNNLDIRFHL--GQTLENLGQM 341
Query: 261 EKAEILFADLQWKNAIDHADLITEVAD-TLMSLGHSNSALKYYHFLETNAGTDNGYLYLK 319
EKA + + + N H +AD +L+ + +A ++ + L + +NG + LK
Sbjct: 342 EKAIVEYMRVLNLNP-KHVRAHHRIADLSLLQENYHRAAEEFENVLRLD--PENGPVQLK 398
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDS 379
LA Y L AI + K+L F D+++ +L + + AI L ++
Sbjct: 399 LARAYEELNRWQDAISAYQKSLRFFPDSVEIWQSLGNTQWQLGNYRAAIVPLR-----ET 453
Query: 380 LDMNSDKSNPWWLNEKIIMKLCHIYRA 406
L + +S W +M+L + +A
Sbjct: 454 LRRDPGRSQAWMFLGDALMQLDQLKKA 480
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 60/352 (17%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A F+ AIS K+ + L+ N + Y +G A G K A + A + P+++
Sbjct: 201 ALSQFDSAISQYKQTLDLNSNFADAYAAIGRIRVATGQLKKALEPLENALRIDPQNALAL 260
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ L + G +AM ++ +P+ L Y+E+G A ES+E +
Sbjct: 261 EYLGRALSRMGKHREAMLAFKELTFVQPQQAKSHYQLGREYLELGQLVNARESFENALRF 320
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILE----EYLKV----------HPSDADLSVIDL 211
+N+D + GQT ++G +E EY++V H ADLS
Sbjct: 321 DSNNLD-------IRFHLGQTLENLGQMEKAIVEYMRVLNLNPKHVRAHHRIADLS---- 369
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
+L EN Y + + E+ ++R + P++LK+ L +
Sbjct: 370 ---LLQEN--YHRAAEEFEN--VLRLDPENGPVQLKLARAYEELN--------------R 408
Query: 272 WKNAI-----------DHADLITEVADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLK 319
W++AI D ++ + +T LG+ +A+ L + G +++
Sbjct: 409 WQDAISAYQKSLRFFPDSVEIWQSLGNTQWQLGNYRAAIVPLRETLRRDPGRSQAWMF-- 466
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLL 371
L + + L + A++ F KAL + A L +L + E+A+ L
Sbjct: 467 LGDALMQLDQLKKAVIPFKKALQLNPELPQADFGLGIILTRLGRHEQAVIHL 518
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 126/325 (38%), Gaps = 40/325 (12%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
++ A G ++A+ L+ +R+ P LG A S +G H+ A + + P+ +
Sbjct: 232 IRVATGQLKKALEPLENALRIDPQNALALEYLGRALSRMGKHREAMLAFKELTFVQPQQA 291
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
QL ++ G A A+R + ++ +R HL +G EKA Y ++
Sbjct: 292 KSHYQLGREYLELGQLVNARESFENALRFDSNNLDIRFHLGQTLENLGQMEKAIVEYMRV 351
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN--- 219
L P +V A A L L R+ E L++ P + + L +A E
Sbjct: 352 LNLNPKHVRAHHRIADLSLLQENYHRAAEEFENVLRLDPENGP---VQLKLARAYEELNR 408
Query: 220 -----NAYEKTLQHIEHA------------QIVRFSGKELPLKLKVKA-----------G 251
+AY+K+L+ + Q+ + +PL+ ++ G
Sbjct: 409 WQDAISAYQKSLRFFPDSVEIWQSLGNTQWQLGNYRAAIVPLRETLRRDPGRSQAWMFLG 468
Query: 252 ICYLRLGNMEKAEILFAD-LQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNA- 309
++L ++KA I F LQ + AD + L LG A+ H T A
Sbjct: 469 DALMQLDQLKKAVIPFKKALQLNPELPQADFGLGI--ILTRLGRHEQAV--IHLERTVAR 524
Query: 310 GTDNGYLYLKLAECYLSLKERAHAI 334
DN L + YL L+ A A+
Sbjct: 525 NPDNFQAQAMLGDSYLELERYAEAV 549
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
R ++N + MLG++ L+ + +A+ L+ + +T LG A+ L
Sbjct: 520 RTVARNPDNFQAQAMLGDSYLELE--RYAEAVPALRAAMGDVTRRQQTLLKLGSAYWHLR 577
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
++ A Y + L P++ ++ QL + G +A++ +AIR + R +L
Sbjct: 578 QYQMALKAYHQSVQLDPENYRIYNQLGVIYSEIGQPDKAIHAYSEAIRLKSDYFEPRFNL 637
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
Y +G Y A S + ++ +N A + + L+ + ++ ++ + PS
Sbjct: 638 GVLYDLLGRYPDALTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQAARYDPS 697
Query: 203 DAD 205
+AD
Sbjct: 698 NAD 700
>gi|307611344|emb|CBX01005.1| hypothetical protein LPW_27071 [Legionella pneumophila 130b]
Length = 577
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 30 LSPGVTKMLGEA-SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
++ V + +A LQY G+ QAISL ++++ SP ET + LGL ++ LG+ ++A
Sbjct: 1 MNSEVDTLFAQAYKLQYE-GHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMENAI 59
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+++ A ++P D + L + G +A+ Y ++AI +P+ + +LA+ Y
Sbjct: 60 LYFLQARKINPNDVGILNNLANAYKKAGQLDEAIKYYQEAIEIKPEYVQAHNNLAATYAL 119
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--- 205
+ +Y+KA Y PD A L LK Q + + + ++P +
Sbjct: 120 LNNYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQF 179
Query: 206 -LSVIDLLVAILME-NNAYEKTL-QHIEHAQ 233
L ++ L +L E A+ K L Q EH Q
Sbjct: 180 YLGILHLEDNLLAEAEQAFHKVLEQDHEHVQ 210
>gi|426193509|gb|EKV43442.1| hypothetical protein AGABI2DRAFT_187874 [Agaricus bisporus var.
bisporus H97]
Length = 1021
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS V M+G+ + + N +AI +++EV+R+ P ++ L + + + A
Sbjct: 123 LSQQVQAMIGQGNQAFVDNNTPEAIRIMQEVIRIEPRATAAWSVLANCYEDMNQGERALQ 182
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
++AAHL D+ W L + G QA+Y R+A +P ++ AS I
Sbjct: 183 IRIMAAHLR-HDAEEWDGLARQSRDLGYNQQALYCYRKAYSLDPTNVDALWDRASLAKNI 241
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE----YLKVHP 201
G+++ A ++ I K FP ++ + + ++ + A + ++ Y K++P
Sbjct: 242 GEFKTARNAFFAILKRFPHDLSVLRELHTILIELSELAACAELFQQAFDHYQKLYP 297
>gi|298491870|ref|YP_003722047.1| hypothetical protein Aazo_3213 ['Nostoc azollae' 0708]
gi|298233788|gb|ADI64924.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 227
Score = 62.0 bits (149), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ AI++ +E +L P + Y+ +G ++ N + A Y A + P +S +
Sbjct: 54 GDYNGAIAVYQEAGKLDPRNAKIYSGIGYLYAQQSNFQLALAAYGRAITIDPNNSDFYYA 113
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GDT A R+AI+ +++ + L +GDYE A +YEQ L
Sbjct: 114 VGYIKGNTGDTPGAKEAYRRAIQLNRNNVNAYLGLGVTQTTLGDYESAMWAYEQAINLNR 173
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
+N + +F + QT + IL + L ++ S D ID + A+L E
Sbjct: 174 NNPRTYELMGSMFKQRRQTQEASNILRKALNLYRSSNDPEGIDRVEALLRE 224
>gi|431807657|ref|YP_007234555.1| hypothetical protein BPP43_05220 [Brachyspira pilosicoli P43/6/78]
gi|430781016|gb|AGA66300.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
Length = 747
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 164/389 (42%), Gaps = 36/389 (9%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ AI +E R+ N ++YN LG+++ A+GN+ A + + + PK + L
Sbjct: 55 FDDAIKYFEEAKRVDINTFKSYNLLGISYHAIGNYDKAIECFYETLKIIPKSYTAYNLLG 114
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+K + +A+ +AI PK +LA ++ +YE A +E + +
Sbjct: 115 ISYYKKNEHDKAIECFNKAIEINPKYDKAYNNLALYHYRSKNYEAAINFFENSKSMDEML 174
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
A + G ++I L YL+ + +S + L AI Y+K +++
Sbjct: 175 FKAYDMLGMCYYNIGNYDKAIECLNRYLQSNSRSYKIS--NTLGAIYSYLKNYDKAIEYF 232
Query: 230 EHAQIV--RFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
A + +++ L L + + N +KA + F D K +D ++A
Sbjct: 233 NKAIEINPKYANAYNNLAL------IFFKQKNFDKAALYF-DKARKFDLDSFTDYYKLAI 285
Query: 288 TLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
+ S + A++Y+ +E N+ + Y ++ L CYLS +E +I +F KA++ +
Sbjct: 286 SYYSKKYYYEAIEYFKKVIERNSNSYKAYNFIGL--CYLSNEEYDKSIEYFKKAIEINDM 343
Query: 347 NIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD------------MNSDKSNPWWLNE 394
A LA+ L +EAI D++ D +++ ++LN+
Sbjct: 344 YYKAYNNLANAYLNLKDYDEAIKYFKSSIDINDSDEAYYGIAICYYSKGEKETSAYYLNK 403
Query: 395 KIIMKLCHIYRAKGMPEDFVDAIFPLVCE 423
I + E+++D +F + +
Sbjct: 404 NI----------DNINENYIDMLFNIYID 422
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
MLG Y GN+++AI L ++ + + NTLG +S L N+ A +++ A
Sbjct: 180 MLGMC--YYNIGNYDKAIECLNRYLQSNSRSYKISNTLGAIYSYLKNYDKAIEYFNKAIE 237
Query: 97 LSPKDSALWKQL-LTFAVQKGDTAQAMYY 124
++PK + + L L F QK A+Y+
Sbjct: 238 INPKYANAYNNLALIFFKQKNFDKAALYF 266
>gi|429963311|gb|ELA42855.1| hypothetical protein VICG_00170 [Vittaforma corneae ATCC 50505]
Length = 775
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
+++RKL +K+ + + +K +++L EA+ +A GN Q +L++ V L PN
Sbjct: 11 EESRKLVEKKLQHRSNKYLAKLEESQLLKEANSLFARGNTGQCFGILQKAVTLVPNDFRP 70
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y LGL H G H+ A Y+ AA L D +LWK+ L +++ + + + R
Sbjct: 71 YYLLGLIHEENGKHEKALVSYIAAAILKNNDISLWKKALNISLRTSSYRNQILALERIFR 130
Query: 131 AEPKD 135
EP +
Sbjct: 131 KEPSE 135
>gi|434381661|ref|YP_006703444.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
gi|404430310|emb|CCG56356.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
Length = 747
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 164/389 (42%), Gaps = 36/389 (9%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ AI +E R+ N ++YN LG+++ A+GN+ A + + + PK + L
Sbjct: 55 FDDAIKYFEEAKRVDINTFKSYNLLGISYHAIGNYDKAIECFYETLKIIPKSYTAYNLLG 114
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+K + +A+ +AI PK +LA ++ +YE A +E + +
Sbjct: 115 ISYYKKNEHEKAIECFNKAIEINPKYDKAYNNLALYHYRSKNYEAAINFFENSKSMDEML 174
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
A + G ++I L YL+ + +S + L AI Y+K +++
Sbjct: 175 FKAYDMLGMCYYNIGNYDKAIECLNRYLQSNSRSYKIS--NTLGAIYSYLKNYDKAIEYF 232
Query: 230 EHAQIV--RFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
A + +++ L L + + N +KA + F D K +D ++A
Sbjct: 233 NKAIEINPKYANAYNNLAL------IFFKQKNFDKAALYF-DKARKFDLDSFTDYYKLAI 285
Query: 288 TLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
+ S + A++Y+ +E N+ + Y ++ L CYLS +E +I +F KA++ +
Sbjct: 286 SYYSKKYYYEAIEYFKKVIERNSNSYKAYNFIGL--CYLSNEEYDKSIEYFKKAIEINDM 343
Query: 347 NIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD------------MNSDKSNPWWLNE 394
A LA+ L +EAI D++ D +++ ++LN+
Sbjct: 344 YYKAYNNLANAYLNLKDYDEAIKYFKSSIDINDSDEAYYGIAICYYSKGEKETSAYYLNK 403
Query: 395 KIIMKLCHIYRAKGMPEDFVDAIFPLVCE 423
I + E+++D +F + +
Sbjct: 404 NI----------DNINENYIDMLFNIYID 422
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
MLG Y GN+++AI L ++ + + NTLG +S L N+ A +++ A
Sbjct: 180 MLGMC--YYNIGNYDKAIECLNRYLQSNSRSYKISNTLGAIYSYLKNYDKAIEYFNKAIE 237
Query: 97 LSPKDSALWKQL-LTFAVQKGDTAQAMYY 124
++PK + + L L F QK A+Y+
Sbjct: 238 INPKYANAYNNLALIFFKQKNFDKAALYF 266
>gi|357419207|ref|YP_004932199.1| hypothetical protein Tlie_0365 [Thermovirga lienii DSM 17291]
gi|355396673|gb|AER66102.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovirga
lienii DSM 17291]
Length = 377
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E+A+S E + L + PE YN+LG + +G A + + A P A W
Sbjct: 76 GSLEEALSEYLEALNLMEDFPEGYNSLGNLYWKMGEPTKAEESFRKALEKRPDYLAAWSN 135
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +G +A+ + +A P + +L +G+ E A E Y + +L P
Sbjct: 136 LGRLLLAEGKVQEALPALEKASELAPSNPENLYYLGEAKKALGNLEGAIEQYRKALELKP 195
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D DA A + + G+ + + I +E + P++A L + + V + T Q
Sbjct: 196 DYTDAEVALAFAYGRMGKVDKGVEIFKEAIARDPNNAKL-LYNFGVMLF-------STRQ 247
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGI--CYLRLGN 259
+ E AQ +GK P ++V + YLRL N
Sbjct: 248 YSEAAQAFSKAGKLDPTSVEVWNNLSQTYLRLQN 281
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G ++A+ L++ L+P+ PE LG A ALGN + A + Y A L P D
Sbjct: 142 AEGKVQEALPALEKASELAPSNPENLYYLGEAKKALGNLEGAIEQYRKALELKP-DYTDA 200
Query: 106 KQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L FA + G + + ++AI +P + L + Y +AA+++ + K
Sbjct: 201 EVALAFAYGRMGKVDKGVEIFKEAIARDPNNAKLLYNFGVMLFSTRQYSEAAQAFSKAGK 260
Query: 165 LFPDNVDATKTGAQLFLKC 183
L P +V+ +Q +L+
Sbjct: 261 LDPTSVEVWNNLSQTYLRL 279
>gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
Length = 546
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 10/259 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE+A +L E+ RL P + LA GN + A + Y L PK+ + ++
Sbjct: 268 GEFERAKEILAELYRLHPEDLNVSYSYALALELTGNPEKALEIYEKLHKLVPKNQRIIER 327
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + G +A I + ++ P ++ L + A+ Y++ YE+A + ++ L P
Sbjct: 328 LANTYIILGRYKEAEELIEKGLQLNPANVKLLMLKANLYIDEKRYEEAVKVLDRAISLAP 387
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
A A G+T + L + ++++P D DL L ++LM + + +
Sbjct: 388 REYRAYFLKAIALDYLGRTIEAEESLRKAMELNPEDPDL-YNHLGYSLLM----WYGSAR 442
Query: 228 HIEHAQIVRFS-GKEL--PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
E Q++R + KEL P + + YL+ G+ EKA I F + A D +
Sbjct: 443 VDEAEQLIRKALSKELDNPAYIDSMGWVYYLK-GDYEKA-IQFLLDALRRAYDDPVVNEH 500
Query: 285 VADTLMSLGHSNSALKYYH 303
V D L+ +G+ A +YY
Sbjct: 501 VGDVLLKMGYKEEAKRYYE 519
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F +A L + +++ PN L + A G + A + Y + P + Q
Sbjct: 202 FSEAEKLYRSILKEDPNNRSALEKLAQLYMATGRIQEAKELYERLYRIDPTNYQYKHQFA 261
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+Q G+ +A + + R P+D+++ A G+ EKA E YE++ KL P N
Sbjct: 262 VTLLQSGEFERAKEILAELYRLHPEDLNVSYSYALALELTGNPEKALEIYEKLHKLVPKN 321
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
+ A ++ G+ + ++E+ L+++P A++ ++ L + ++ YE+ ++ +
Sbjct: 322 QRIIERLANTYIILGRYKEAEELIEKGLQLNP--ANVKLLMLKANLYIDEKRYEEAVKVL 379
Query: 230 EHA 232
+ A
Sbjct: 380 DRA 382
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 142/347 (40%), Gaps = 48/347 (13%)
Query: 55 SLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQ 114
SL + +RL +L T L LA + + P + + L +
Sbjct: 51 SLYMDTIRLEVSLKNTKKALELAQEYMKRY--------------PNRAEPYIALYSIYRL 96
Query: 115 KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATK 174
KGD +A+ + +A + PK+ + I LA Y++ G ++A E ++ +L P+N
Sbjct: 97 KGDRKKAIEVLEKARKKFPKNKEIFIFLADEYIKSGRMKEAKEVLQRFAELSPNNPFPYY 156
Query: 175 TGAQLFLKCGQTARSIGILEEYL--------------KVHPSDADLSVID-LLVAILMEN 219
QL+L G+ R+I L+ L K++ S + L +IL E+
Sbjct: 157 LLGQLYLSEGKVDRAIEYLQRALDIRKTFEAAFVTLGKIYERSERFSEAEKLYRSILKED 216
Query: 220 NAYEKTLQHIEHAQIVRFSG-----KELPLKL----------KVKAGICYLRLGNMEKAE 264
L+ + AQ+ +G KEL +L K + + L+ G E+A+
Sbjct: 217 PNNRSALEKL--AQLYMATGRIQEAKELYERLYRIDPTNYQYKHQFAVTLLQSGEFERAK 274
Query: 265 ILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECY 324
+ A+L ++ + ++ A L G+ AL+ Y L N + +LA Y
Sbjct: 275 EILAEL-YRLHPEDLNVSYSYALALELTGNPEKALEIYEKLHKLV-PKNQRIIERLANTY 332
Query: 325 LSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLL 371
+ L A K L N+ + A+L ++E + EEA+ +L
Sbjct: 333 IILGRYKEAEELIEKGLQLNPANVKLLMLKANLYIDEKRYEEAVKVL 379
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 108/251 (43%), Gaps = 7/251 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++AI +L++ + P E + L + G K A + A LSP + +
Sbjct: 98 GDRKKAIEVLEKARKKFPKNKEIFIFLADEYIKSGRMKEAKEVLQRFAELSPNNPFPYYL 157
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +G +A+ Y+++A+ + + L Y + +A + Y I K P
Sbjct: 158 LGQLYLSEGKVDRAIEYLQRALDIRKTFEAAFVTLGKIYERSERFSEAEKLYRSILKEDP 217
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N A + AQL++ G+ + + E ++ P++ L+++ +E+ +
Sbjct: 218 NNRSALEKLAQLYMATGRIQEAKELYERLYRIDPTNYQYK--HQFAVTLLQSGEFERAKE 275
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
+ A++ R ++ L + + GN EKA ++ L K + +I +A+
Sbjct: 276 IL--AELYRLHPED--LNVSYSYALALELTGNPEKALEIYEKLH-KLVPKNQRIIERLAN 330
Query: 288 TLMSLGHSNSA 298
T + LG A
Sbjct: 331 TYIILGRYKEA 341
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 89/244 (36%), Gaps = 68/244 (27%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-- 89
P + + L+ + N ++A+ L +E ++ PN E Y L + G+ K A +
Sbjct: 48 PTPSLYMDTIRLEVSLKNTKKALELAQEYMKRYPNRAEPYIALYSIYRLKGDRKKAIEVL 107
Query: 90 -------------FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGD 117
F +A A LSP + + L + +G
Sbjct: 108 EKARKKFPKNKEIFIFLADEYIKSGRMKEAKEVLQRFAELSPNNPFPYYLLGQLYLSEGK 167
Query: 118 TAQAMYYIRQA----------------------------------IRAEPKDISLRIHLA 143
+A+ Y+++A ++ +P + S LA
Sbjct: 168 VDRAIEYLQRALDIRKTFEAAFVTLGKIYERSERFSEAEKLYRSILKEDPNNRSALEKLA 227
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
Y+ G ++A E YE++ ++ P N A L+ G+ R+ IL E ++HP D
Sbjct: 228 QLYMATGRIQEAKELYERLYRIDPTNYQYKHQFAVTLLQSGEFERAKEILAELYRLHPED 287
Query: 204 ADLS 207
++S
Sbjct: 288 LNVS 291
>gi|196005799|ref|XP_002112766.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
gi|190584807|gb|EDV24876.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
Length = 802
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+F QAI +V+ L+P LG + + G+ AF +Y+ + P + +
Sbjct: 553 DFHQAIDWYTQVLTLAPTDASLLAKLGALYDSQGDKSQAFQYYLESYRYYPSNIETISWI 612
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
++ ++ +A+ Y +A +P ++ ++ +AS Y IG+Y +A + Y+QI + FP+
Sbjct: 613 GSYYIESQFCEKAISYFDKASMIQPNEVKWQLMVASCYRIIGNYNRALDKYKQIHEKFPE 672
Query: 169 NVDATK 174
N D K
Sbjct: 673 NTDCLK 678
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 68/167 (40%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
M+ + + + +E+A KE + + + E LGL L + + D ++
Sbjct: 473 MVNKGNCLFTAKEYEKAQEYYKEALNVEASCVEALYNLGLTKKMLNCPEESLDCFLKLHG 532
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
+ D + Q+ D QA+ + Q + P D SL L + Y GD +A
Sbjct: 533 IIRNDPMILVQIAELYEILDDFHQAIDWYTQVLTLAPTDASLLAKLGALYDSQGDKSQAF 592
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ Y + + +P N++ +++ ++I ++ + P++
Sbjct: 593 QYYLESYRYYPSNIETISWIGSYYIESQFCEKAISYFDKASMIQPNE 639
>gi|356530423|ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1086
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 39/266 (14%)
Query: 115 KGDTAQAMYYIRQAIRA--EPKDISLRIH-LASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
KGD +A Y +++ +P + + L +++GD++ A ++E++ +++PDN +
Sbjct: 315 KGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKSALSNFEKVLEVYPDNCE 374
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--LSVIDLLVAILMENNAYEKTLQHI 229
K ++++ GQT + + + K+ P DA L + +LL IL + A L
Sbjct: 375 TLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL--ILSDTGA---ALDAF 429
Query: 230 EHAQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF----ADLQW--------KNAI 276
+ A+ + + G+E+P++L G+ G E A+ F D W K++I
Sbjct: 430 KTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVWLSFINEEKKSSI 489
Query: 277 DHADLITEVADTLMSLGHSNSALKYYHFLETNAGT-----DNGYLYLKLAECYLSLKERA 331
D A + D +K +H LE+N D + LA L +
Sbjct: 490 DAATSTLQFKD-----------MKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNDSG 538
Query: 332 HAIMFFYKALDRFEDNIDARLTLASL 357
A + + L ++ D IDA L LA++
Sbjct: 539 TASILYRLVLFKYPDYIDAYLRLAAI 564
>gi|414078029|ref|YP_006997347.1| hypothetical protein ANA_C12830 [Anabaena sp. 90]
gi|413971445|gb|AFW95534.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 442
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-DSALWK 106
GN+++AI+ + ++++PN PE Y+ G ++ AL ++SA Y + ++PK +A +
Sbjct: 64 GNYQKAIADYNQCIKINPNFPEAYHNRGNSYYALQEYQSAISNYNRSLEINPKFGAAYYN 123
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ L +A + D QA+ QA++ P DI + +GDYE A + Y Q ++
Sbjct: 124 RGLVYA-RIQDYYQAIADFNQALKIVPDDIQAYYERGLVHSNLGDYENAIKDYNQALQIN 182
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
P V A G +I + L++ P
Sbjct: 183 PTLVSVYGFRANAHHHLGNYENAIIDYNQALQIDP 217
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-- 105
G++E AI + ++++P L Y AH LGN+++A Y A + P + +
Sbjct: 166 GDYENAIKDYNQALQINPTLVSVYGFRANAHHHLGNYENAIIDYNQALQIDPHLATAYYG 225
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ ++ A+Q A A Y QAI P+ S Y +G+ + A + Y Q K+
Sbjct: 226 RGMVREAIQDLIGAVADY--TQAIEVSPEFASAYCKRGDAYKLLGNIQTAIQDYNQALKI 283
Query: 166 FPDNVDA 172
D++ A
Sbjct: 284 DSDSLAA 290
>gi|269925204|ref|YP_003321827.1| hypothetical protein Tter_0083 [Thermobaculum terrenum ATCC BAA-798]
gi|269788864|gb|ACZ41005.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
BAA-798]
Length = 2240
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ AIS+L++ + P PE YN LGLA+ A G H+ A + A L P D+A + +
Sbjct: 1789 FKDAISILQKAAEIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRP-DNATYNRNA 1847
Query: 110 TFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
A Q T A+ ++ A+ EP + L + YE+A Y + +L PD
Sbjct: 1848 AIAHQDLKQTKLAIEKLQHAVMLEPYQPTWHFELGALLEASEQYEEALAEYNEAMQLNPD 1907
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
A++ + G+ +I L+ LK+ P +
Sbjct: 1908 GAIYAFRAAEVCERMGKKEEAIECLKYALKLEPRN 1942
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 6/215 (2%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++++AI + VRL P + Y+ LG ++ +GNH A Y A + P D ++L
Sbjct: 1720 DYDRAIRAFQMAVRLDPEFAQAYSELGATYNMVGNHSEALINYERALQIRPDDGLTLRRL 1779
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ Q A+ +++A +P+D + L Y G + +A +E KL PD
Sbjct: 1780 GSTYRQMKRFKDAISILQKAAEIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPD 1839
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
N + A QT +I L+ + + P L A+L + YE+ L
Sbjct: 1840 NATYNRNAAIAHQDLKQTKLAIEKLQHAVMLEPYQPTWHFE--LGALLEASEQYEEALAE 1897
Query: 229 IEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
A + G + A +C R+G E+A
Sbjct: 1898 YNEAMQLNPDGAIYAFR---AAEVCE-RMGKKEEA 1928
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A+ L++ + L N E Y+ + L +G A+D + + LSP + L
Sbjct: 1366 ALQHLQKAIELDSNFAEPYHQMALVMQDMGRFDDAYDLFQRSISLSPDNPRYHYNLGILM 1425
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+GD A+ + +AI +P + LA Y +IG +KA + E+ +L PDN
Sbjct: 1426 RSQGDLHDAINQVSKAIDIQPNNAEWHSTLADLYFQIGMLDKARKEAEEASRLDPDN 1482
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 142/361 (39%), Gaps = 19/361 (5%)
Query: 29 KLSPGVTK-MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+LS G+ + +L A +Q G E A LK+V++ +P L Y LG+ G++ A
Sbjct: 797 ELSGGMPQYLLNAAIVQRKAGMLEDAEESLKKVIQNNPGLAPAYFELGMVAEQKGDYILA 856
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ Y A LSP + + A G+ QA IR A P+ + L +
Sbjct: 857 LERYRKALELSPDNEHFIVAVSRSARLSGNLLQADELIRDAFSRMPESALIHDELGTIEF 916
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD--AD 205
G+Y+KA+E + + KL P+ D + + + + EE L++ ++ A
Sbjct: 917 VRGNYQKASECFLKATKLSPETSDFWAHLGKAYRYLTRLDEAKEACEEALRLDANNPVAH 976
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
LL+A+ N E+ L H A + + L L G C +LG + +
Sbjct: 977 HETAMLLIAL----NEEEEALSHFRKAARLDARNAQYALDL----GACASKLGRVNEGLT 1028
Query: 266 LFA---DLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAE 322
L N HA E+ + S G AL ++ + YL++
Sbjct: 1029 WLEKALSLDPNNGQAHA----ELGMLMGSRGQWEEALAHFRASLLIDEQNVDYLHMYGIA 1084
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDM 382
C L AI +AL D +T A L K +EAI L LD ++
Sbjct: 1085 C-LHTDATEDAIKTLERALALDPRRADVYVTYAEALEIAGKRDEAIQNLQEAVRLDDTNV 1143
Query: 383 N 383
+
Sbjct: 1144 S 1144
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L + G+ AI+ + + + + PN E ++TL + +G A A+ L P +
Sbjct: 1424 LMRSQGDLHDAINQVSKAIDIQPNNAEWHSTLADLYFQIGMLDKARKEAEEASRLDPDNY 1483
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
+QL A + D QA+ RQA++ P + LAS +G+ A Y+Q
Sbjct: 1484 RYHRQLSVIARETQDLDQALASARQALKCAPDEPQAIAELASVQEALGELTSALALYKQA 1543
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P N D + ++ + G+T S+ L++ + + P+ D
Sbjct: 1544 AMLDPLNADYHRKIGSIYRQLGKTQESLQSLQKAIDLAPNAPD 1586
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 60/121 (49%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+ +QA++ ++ ++ +P+ P+ L ALG SA Y AA L P ++ +++
Sbjct: 1498 DLDQALASARQALKCAPDEPQAIAELASVQEALGELTSALALYKQAAMLDPLNADYHRKI 1557
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ Q G T +++ +++AI P + Y++ +++A + ++ +L PD
Sbjct: 1558 GSIYRQLGKTQESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFDEACKVLQKATQLAPD 1617
Query: 169 N 169
N
Sbjct: 1618 N 1618
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A L + L + YN LG + +G H +A + + A SP+ + Q
Sbjct: 681 GRVEEAERELVTAIELDSKYADAYNELGSLYMDMGKHLAALENFQKAIQYSPEQPEYYLQ 740
Query: 108 L-LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ LT+ K A+A+ ++ A+ +PKD++ R LA Y + G +A E Y
Sbjct: 741 MGLTYRALK-QPAKAITALQIALSMDPKDLNKRAILAETYCQSGRLTEAIEEYRWA---- 795
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEE 195
++ + Q L R G+LE+
Sbjct: 796 ---IELSGGMPQYLLNAAIVQRKAGMLED 821
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 142/354 (40%), Gaps = 17/354 (4%)
Query: 29 KLSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+++P V + + + Y + + A ++E VR+SP++ YN LG+ + G A
Sbjct: 1273 RIAPSVAQYHRDLGIAYRSISEYGAACQEIEEAVRISPDVAAWYNDLGICYERRGWLHEA 1332
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ A L P + Q+ A+ ++++AI + +A
Sbjct: 1333 VQAFEKAIELQPGEPVYLSNAGNVLRQQRKHDLALQHLQKAIELDSNFAEPYHQMALVMQ 1392
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL- 206
++G ++ A + +++ L PDN L G +I + + + + P++A+
Sbjct: 1393 DMGRFDDAYDLFQRSISLSPDNPRYHYNLGILMRSQGDLHDAINQVSKAIDIQPNNAEWH 1452
Query: 207 -SVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
++ DL I M +K + E A + +L V A ++++A +
Sbjct: 1453 STLADLYFQIGM----LDKARKEAEEASRLDPDNYRYHRQLSVIAR----ETQDLDQA-L 1503
Query: 266 LFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTD--NGYLYLKLAEC 323
A K A D I E+A +LG SAL Y + A D N + K+
Sbjct: 1504 ASARQALKCAPDEPQAIAELASVQEALGELTSALALY---KQAAMLDPLNADYHRKIGSI 1560
Query: 324 YLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDL 377
Y L + ++ KA+D + D+ + L L+ + +EA +L L
Sbjct: 1561 YRQLGKTQESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFDEACKVLQKATQL 1614
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
AI L+ V L P P + LG A ++ A Y A L+P + +
Sbjct: 1860 AIEKLQHAVMLEPYQPTWHFELGALLEASEQYEEALAEYNEAMQLNPDGAIYAFRAAEVC 1919
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
+ G +A+ ++ A++ EP++ R L Y+++ + AAE + ++ P++ +A
Sbjct: 1920 ERMGKKEEAIECLKYALKLEPRNYEWRFKLGCMYLDMEYFAPAAEELAKSLEIEPESAEA 1979
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
+ Q +++ L + K+ P++ D V + L ++ + E+ + HI A
Sbjct: 1980 HLKLGIALINLEQYDQALERLMDAAKIEPNNFD--VHEQLSLVMEKLGRPEEAISHIAQA 2037
Query: 233 QIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFA---DLQWKNAIDHAD--LITEVAD 287
++ S + L +AG Y + +E+A +L +A H++ LI E +
Sbjct: 2038 LLLDSSRAD----LYRRAGKLYADMDRLEEAAQALEKALELDPDDAETHSELGLIYEAQE 2093
Query: 288 TL-MSLGHSNSALK 300
L ++LG A++
Sbjct: 2094 KLKLALGEQKEAIR 2107
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
FE+A++ L+ + L P YN G+ + A+GN +A + Y IA L P D AL+ + L
Sbjct: 2129 FEEAMAALERSLDLDPENAAAYNERGMLYEAMGNLDAAREQYEIAVRLQP-DEALYHRNL 2187
Query: 110 TFAVQKGDTAQ-AMYYIRQAIRAEP 133
+K A +RQA++ P
Sbjct: 2188 GVVYKKLKRYDLAASELRQAVKLRP 2212
>gi|304313076|ref|YP_003812674.1| hypothetical protein HDN1F_34590 [gamma proteobacterium HdN1]
gi|301798809|emb|CBL47042.1| Hypothetical protein HDN1F_34590 [gamma proteobacterium HdN1]
Length = 881
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 6/200 (3%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP ++L E L+ +A+ LL+ + SP + GLA A G + +
Sbjct: 357 SPEALRVLAENQLRL--NKVSEAMHLLEANLSRSPEDADLLGVYGLAALANGQSEKGLEA 414
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A ++P + L L + +QKGD A+ + +AI+ P +++LR L Y+
Sbjct: 415 LQKALKIAPSKTGLRATLAQYYLQKGDAKSAIDQLEKAIKQAPSELALRGQLVQIYLREK 474
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD----L 206
+ + QI+K F N D ++ + G ++ LE+ L + P++ + +
Sbjct: 475 NLDAVKNQAAQIEKDFATNADGLAAAGSIYTQLGAVKQAKPALEKALSLEPTNPNALTAM 534
Query: 207 SVIDLLVAILMENNAYEKTL 226
+++L L + +Y +T+
Sbjct: 535 VILELKGGDLKKARSYAETI 554
>gi|209544340|ref|YP_002276569.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209532017|gb|ACI51954.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 648
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 28/238 (11%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
PG + +LG ++ G FE AI LL+ + P E YN LG+A G + A +
Sbjct: 42 PGASCLLG--TIHARQGKFESAIPLLRRALARMPANAEGYNVLGMALRDAGQAEDAIACF 99
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI----------------RQAIRAEPKD 135
A + P L V GD A A+ R A+ A+P D
Sbjct: 100 RRAVAIRPDHQGARTNLGNALVAGGDRAGAIAQFRALLTLDTQLAAIADYRTALAADPAD 159
Query: 136 ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+ I L + IG E+AA ++ PD V A A + G+ ++
Sbjct: 160 VETLIRLGAALRTIGRCEEAAAHFQAASSHAPDRVAARLHRAGALAELGRIDDAMAC--- 216
Query: 196 YLKVHPSDA-DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGI 252
Y V DA + +V+ ++ +L +N Y + ++++E A+ ++ P V AG+
Sbjct: 217 YQSVLDRDANNYTVLLMMGELLQKNERYAEAIRYLEQARALQ------PDAASVHAGL 268
>gi|376005368|ref|ZP_09782882.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
gi|423065278|ref|ZP_17054068.1| serine/threonine protein kinase with TPR repeat protein
[Arthrospira platensis C1]
gi|375326295|emb|CCE18635.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
gi|406713188|gb|EKD08360.1| serine/threonine protein kinase with TPR repeat protein
[Arthrospira platensis C1]
Length = 754
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL P + SL Y +F AI+ L +V+RL+P + + GLAH + N+++A
Sbjct: 427 KLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQENYEAA 486
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y P +S ++ + V+ G+ M +AIR P+ + +
Sbjct: 487 ILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRGRARF 546
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+GDY+ A Y Q+ PDN +A ++ G +I ++++P+ D
Sbjct: 547 HLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMD 604
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N++ AI + + L PN + ++ GL HS N+++A Y A L+P D+ +
Sbjct: 617 NYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENYEAAIADYSQAISLNPNDAESYSNR 676
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ G+ ++A+ QAIR P +GD A +EQ KLF
Sbjct: 677 AQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQAGKLF 734
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 62/157 (39%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E AI ++L P+ E + A+ L ++ A Y A L P + ++
Sbjct: 379 GDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 438
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
Q D A+ + Q IR P+D + +YE A Y ++ + P
Sbjct: 439 RSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQENYEAAILDYTEVIRRQP 498
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+N +A + +K G + E ++++P A
Sbjct: 499 NNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESA 535
>gi|209523829|ref|ZP_03272382.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
gi|209495861|gb|EDZ96163.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
Length = 754
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL P + SL Y +F AI+ L +V+RL+P + + GLAH + N+++A
Sbjct: 427 KLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQENYEAA 486
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y P +S ++ + V+ G+ M +AIR P+ + +
Sbjct: 487 ILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRGRARF 546
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+GDY+ A Y Q+ PDN +A ++ G +I ++++P+ D
Sbjct: 547 HLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMD 604
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N++ AI + + L PN + ++ GL HS ++++A Y A L+P D+ +
Sbjct: 617 NYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNR 676
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ G+ ++A+ QAIR P +GD A +EQ KLF
Sbjct: 677 AQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQAGKLF 734
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 62/157 (39%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E AI ++L P+ E + A+ L ++ A Y A L P + ++
Sbjct: 379 GDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 438
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
Q D A+ + Q IR P+D + +YE A Y ++ + P
Sbjct: 439 RSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQENYEAAILDYTEVIRRQP 498
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+N +A + +K G + E ++++P A
Sbjct: 499 NNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESA 535
>gi|39935540|ref|NP_947816.1| o-linked GlcNAc transferase [Rhodopseudomonas palustris CGA009]
gi|39649393|emb|CAE27915.1| possible o-linked GlcNac transferase [Rhodopseudomonas palustris
CGA009]
Length = 556
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ + ++L PNLP + G A LG+ A Y A L PK+S
Sbjct: 116 GKPERALADADQAIKLDPNLPLAHFVRGSAELKLGHDDRAIADYSRAIELRPKESGEVYA 175
Query: 108 LLTFAV-QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ FA +KGD +A+ +A++A P+D+ ++ + D AA Y + KL
Sbjct: 176 VRGFAYHRKGDDIRAVADYTEALKAAPEDVGTLLNRGDARRNLRDTAGAAADYSEAIKLA 235
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-----SVIDL----LVAILM 217
P N K + L T ++ E +++ PS++ L S + L L+A+
Sbjct: 236 PGNAGGFKGRGFIRLLTQDTGGAVADFTEAIRLSPSESGLYLNRASALGLQNQSLLALAD 295
Query: 218 ENNAYEKTLQH----IEHAQIVRFSGKELPLKLKV 248
E+ A QH + A+ ++ G ++ + V
Sbjct: 296 EDMAIRLEPQHPLAYVNRAETLKLLGDKVAARASV 330
>gi|392585645|gb|EIW74984.1| TPR-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 1030
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS V ++GE + Y GN +A +++EV+R+ P + L +S G+H A
Sbjct: 53 LSHQVRALIGEGNQAYVDGNNAEASRIMQEVIRIEPRATAAWGVLAQCYSDAGDHGRALQ 112
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
++AAHL D+ W++L + + G QA+Y + +P +++ A+ E+
Sbjct: 113 LRIMAAHLR-HDADEWERLAVQSREMGHGQQALYCYGKLYSLDPSNVNALWDRATLAKEL 171
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
+ A S+ I K +P ++ + + G+ A
Sbjct: 172 LEIRTARHSFTAILKHYPHDMAVLAELRSILIDAGELA 209
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
L + + + + ++LG++++ +I + ++ +D+A L E+AD + A
Sbjct: 368 LDINARHRLAVARIKLGDIDEGKIHANIVLTQDPLDYAPLFGELADAYFEKETYDQAGPV 427
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
Y L ++ T + Y+ L++A C A + + +D N DA++ LA L
Sbjct: 428 YELLGSDPATSSMYVLLQVATCRRMTGGLREAAEVYQQVIDADPANNDAKMKLAEL 483
>gi|298710892|emb|CBJ26401.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
family GT41 [Ectocarpus siliculosus]
Length = 1080
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + +RL P+ P YN LG A G K A YV A L PK +A+
Sbjct: 324 GQLEEAINCYRTTLRLKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTAVQLMPKFAAVHSN 383
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++G A A+ + +AI +P ++ + Y ++G +A + Y + P
Sbjct: 384 LGSVLKEQGKLAHALAHYHEAIAIDPGFADAYSNMGNAYKDMGRLPEAIKCYSAAINIKP 443
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAI 215
DA A + + ++I + L + P DA +++ LV +
Sbjct: 444 TFADAFSNLASAYKEGNDVLQAIACYRKALSLRPDFPDAFANLVHSLVFV 493
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ + NF + + ++ +R+ PN E Y+ LG A LG+ A FY+ A L P+
Sbjct: 79 GAVHFQLRNFSECVLYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKAVKLKPR 138
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L + +Q G T +A+ + A+ + +L + Y G +A Y
Sbjct: 139 FCDAYNNLASAYMQLGHTKEAIETYQMALVLNRGLVDAHSNLGNLYKAQGMLAEAKRCYL 198
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P A A +F + G ++ E +++ P AD
Sbjct: 199 EAIRIQPSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCPEFAD 243
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL P G AS Y G + AI + ++L PN P+ YN LG A G + A
Sbjct: 270 KLRPDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPNFPDAYNNLGNALRESGQLEEA 329
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ Y L P + L KG +A++ A++ PK ++ +L S
Sbjct: 330 INCYRTTLRLKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTAVQLMPKFAAVHSNLGSVLK 389
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E G A Y + + P DA + G+ +I + + P+ AD
Sbjct: 390 EQGKLAHALAHYHEAIAIDPGFADAYSNMGNAYKDMGRLPEAIKCYSAAINIKPTFAD 447
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS G+ ++AI + + L+ L + ++ LG + A G A Y+ A + P
Sbjct: 147 ASAYMQLGHTKEAIETYQMALVLNRGLVDAHSNLGNLYKAQGMLAEAKRCYLEAIRIQPS 206
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L ++G+ A+ Y R+AIR P+ +L + E G A + Y+
Sbjct: 207 FAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCPEFADAHSNLGNVLKERGLVHDAMQCYQ 266
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
KL PD A A + CG +I +++ P+ D
Sbjct: 267 TAIKLRPDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPNFPD 311
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 71/171 (41%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+ +L A Y G ++ A +L + V R + LG H L N +
Sbjct: 38 LAALLSAAHESYNLGRYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECVLYNQQ 97
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
+ P + + L + GD A+ + +A++ +P+ +LAS Y+++G +
Sbjct: 98 CIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKAVKLKPRFCDAYNNLASAYMQLGHTK 157
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+A E+Y+ L VDA L+ G A + E +++ PS A
Sbjct: 158 EAIETYQMALVLNRGLVDAHSNLGNLYKAQGMLAEAKRCYLEAIRIQPSFA 208
>gi|335042437|ref|ZP_08535464.1| tfp pilus assembly protein PilF [Methylophaga aminisulfidivorans
MP]
gi|333789051|gb|EGL54933.1| tfp pilus assembly protein PilF [Methylophaga aminisulfidivorans
MP]
Length = 530
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 39/296 (13%)
Query: 29 KLSPGVTKM-LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K+ P + +M A+L E+AI K+ V L PNL + Y +G+AH AL + A
Sbjct: 73 KIDPSIAEMHFNLAALLTNMNRHEEAIQSYKKAVSLKPNLVDAYYNMGIAHQALKQYLQA 132
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAV---QKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
Y A L P ++ ++ V ++G +A+ +A+ D + +L +
Sbjct: 133 SQNYQKAIELEP---GFYEAMVNLGVVLQEQGMLIEAINTYNKALHIH-NDAQIYFNLGT 188
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
Y G +A +Y + +L PD D ++ ++ G+ S+ + L+++P
Sbjct: 189 AYKNQGKLGEAIAAYNKALELNPDYADVHRSVGEVLRDQGRYDESVAAYKRALELNP--- 245
Query: 205 DLSVIDLLVAI-LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
DL + + +A+ L ++ + L+H + +Q + + L C + G EK
Sbjct: 246 DLPMANYSLAVYLYDSGDLQGALEHFQRSQYADWQERSL---------YCLYKTGQFEK- 295
Query: 264 EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLK 319
+KN +D + + L +L H+ E N GT+N Y + K
Sbjct: 296 --------FKNGLDALKRSKDNSPFLATLAG--------HYAE-NFGTENDYNFCK 334
>gi|82540779|ref|XP_724681.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479409|gb|EAA16246.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 949
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS-ALGNHKSA 87
K++ V ++ +A+ Y N+E+ I LL++V+++SP+L + Y+ LGL + N K A
Sbjct: 414 KMNKEVENLINKANNNYINQNYEECIKLLEQVIKISPDLHDPYHLLGLIYEREYNNLKKA 473
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
++Y+IAAHL+ D W + + + +Y + +A+R
Sbjct: 474 INYYLIAAHLTRNDFLTWYNISNLCKIEKEYNILLYCLYKAMR 516
>gi|149178802|ref|ZP_01857383.1| TPR repeat [Planctomyces maris DSM 8797]
gi|148842343|gb|EDL56725.1| TPR repeat [Planctomyces maris DSM 8797]
Length = 591
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 55/269 (20%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+LQ G+ +Q+I +VV+L P LP+ +N LG+A+ A G + A +
Sbjct: 45 GTLQLQRGDLDQSIRTFLQVVQLQPELPDVHNNLGVAYHAAGKWQEAGQSF--------- 95
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
QAIR P +L S + G + +A + Y+
Sbjct: 96 -------------------------EQAIRLNPHYERAYFNLGSLFESRGVFSEAVKCYQ 130
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ L P N+D + A G+ AR+ I E L P D DLS+ L +L+
Sbjct: 131 KAHDLSPGNLDTHQKLADALKSAGEWARAEDIYRELLVAKPGDFDLSMK--LAYVLVLQR 188
Query: 221 AYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD 280
Y++ + E +++ S ++ V Y +GN++ AI+ A+
Sbjct: 189 QYQEAIMLYES--MLKISPDH--YQILVSLSYVYEAVGNIDA------------AIEAAE 232
Query: 281 LITEVADTLMSLGHSN--SALKYYHFLET 307
+VA T G++N +A K H LE
Sbjct: 233 RSIQVAPT-QPEGYNNLGNAFKLKHDLEN 260
>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 818
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 11/254 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +AI+ + +RL P Y G A + G + A Y A +PK + ++
Sbjct: 278 GEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRN 337
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA+R +P+ + + + + G+Y++A Y+Q +L P
Sbjct: 338 RGDAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDP 397
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ A F + G+ R+I EE L++ P A + + A L + Y++ +
Sbjct: 398 KDAAAYTNRGAAFYRKGEHDRAIADYEEALRLDPKSA--AAYNGRGAALNKKGDYDRAIA 455
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID--HADLITEV 285
++ A ++ G P + G+ + G++++A ADL ++ +AD E
Sbjct: 456 DLDQALRLK-PGFTNPHYHR---GMAFRHKGDLDRA---LADLNEAVRLNPKYADAYQER 508
Query: 286 ADTLMSLGHSNSAL 299
T + G S+ AL
Sbjct: 509 GVTFQARGESDRAL 522
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +R +P P Y G + G + A Y A L+P+D+A +
Sbjct: 176 GEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTH 235
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
K + +A+ QA+R +PK ++ I+ + G+Y +A ++Q +L P
Sbjct: 236 RGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 295
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+V A F G+ R+I ++ L+ +P
Sbjct: 296 KSVIAYTGRGDAFRSKGENDRAIADYDQALRFNP 329
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +RL P Y G A G H A Y A L PK +A +
Sbjct: 380 GEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLDPKSAAAYNG 439
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+KGD +A+ + QA+R +P + H + GD ++A + +L P
Sbjct: 440 RGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNP 499
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
DA + F G++ R++ L E +++ P
Sbjct: 500 KYADAYQERGVTFQARGESDRALADLAEAVRLKP 533
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +++AI+ + +RL P Y GLA G + A Y A L PK + +
Sbjct: 71 YRKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANI 130
Query: 105 W-KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ + L F +KG+ +A+ QA+R + +D + + + G+Y++A Y+Q
Sbjct: 131 YINRGLAF-YRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQAL 189
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ P A + F G+ R+I ++ L+++P DA
Sbjct: 190 RFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDA 230
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +RL P Y GLA G + A Y A L PK + +
Sbjct: 40 GEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKSAVAYTH 99
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL-F 166
+KG+ +A+ QA+R +PK ++ I+ + G+Y++A Y+Q +L
Sbjct: 100 RGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDL 159
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D V T G F G+ R+I ++ L+ +P
Sbjct: 160 RDAVVYTNRG-DAFRSKGEYDRAIADYDQALRFNP 193
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +RL+P Y GLA + + A Y A L PK + ++
Sbjct: 210 GEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYIN 269
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA+R +PK + + G+ ++A Y+Q + P
Sbjct: 270 RGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNP 329
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A + F G+ R+I + L++ P A
Sbjct: 330 KYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSA 366
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%)
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y G A + G + A Y A L PK + + +KG+ +A+ QA+R
Sbjct: 29 YYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALR 88
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+PK H + G+Y++A Y+Q +L P + F + G+ R+I
Sbjct: 89 LDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAI 148
Query: 191 GILEEYLKVHPSDA 204
++ L++ DA
Sbjct: 149 ADYDQALRLDLRDA 162
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Query: 115 KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATK 174
KG+ +A+ QA+R +PK H + G+Y++A Y+Q +L P + A
Sbjct: 39 KGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKSAVAYT 98
Query: 175 TGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQI 234
F + G+ R+I ++ L++ P A++ + L Y++ + + A
Sbjct: 99 HRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLA--FYRKGEYDRAIADYDQA-- 154
Query: 235 VRFSGKELPLKLKVKAGICYLRLGN 259
L+L ++ + Y G+
Sbjct: 155 ---------LRLDLRDAVVYTNRGD 170
>gi|428223874|ref|YP_007107971.1| hypothetical protein GEI7407_0418 [Geitlerinema sp. PCC 7407]
gi|427983775|gb|AFY64919.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 267
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
G+ ++ SPG + G Q G E AI+ E +RL+P E Y GLA++ LG +
Sbjct: 38 GATSQPSPGEFFVRGMYLAQE--GKTEAAIADWSEAIRLAPEFTEAYYNRGLAYAQLGRY 95
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
A + A L+P+ + +GD A+ A+R +P+D S + +
Sbjct: 96 DRAEQDFSRALLLNPRLGDAYDNRGVVRAARGDAPGAIADFTTALRLDPQDASSYYNRGN 155
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
Y E+ Y++A Y++ +L P A + ++ L A +I + +++ P +A
Sbjct: 156 VYDEMERYQRAIADYDEAIRLSPAYTSAYNSRGRVRLALENFAGAIEDFSQAIEIDPENA 215
Query: 205 DLSVIDLLVAILMEN 219
+V LMEN
Sbjct: 216 IAYYSRGVVHGLMEN 230
>gi|110597764|ref|ZP_01386048.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM
13031]
gi|110340671|gb|EAT59151.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM
13031]
Length = 542
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 65 PNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYY 124
P+ + + LG AH G+ A D A + P + W L ++G+T + +
Sbjct: 284 PSSSDAWGYLGFAHLQKGDLALAIDALQNAIRIRPDYAHYWADLGIAYGREGETVRKIEA 343
Query: 125 IRQAIRAEPKDISLR-IHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
RQA+R D +L I+L YV+ GD++KA ++Y+Q ++ PD+ +
Sbjct: 344 YRQAVRIN-NDFALGWINLGIAYVQNGDFDKAVDAYQQAVRINPDDASVWFNTGLVCRDA 402
Query: 184 GQTARSIGILEEYLKVHPSDA 204
GQ A+++ E +++ P +A
Sbjct: 403 GQAAKAVDAFEHAVRIAPENA 423
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG A LQ G+ AI L+ +R+ P+ + LG+A+ G + Y A +
Sbjct: 293 LGFAHLQK--GDLALAIDALQNAIRIRPDYAHYWADLGIAYGREGETVRKIEAYRQAVRI 350
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+ + W L VQ GD +A+ +QA+R P D S+ + + G KA +
Sbjct: 351 NNDFALGWINLGIAYVQNGDFDKAVDAYQQAVRINPDDASVWFNTGLVCRDAGQAAKAVD 410
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCG-------QTARSIGILEEYLKVHPSDADLSVID 210
++E ++ P+N AQ LK G Q AR I E L++ D D + +
Sbjct: 411 AFEHAVRIAPEN-------AQYRLKLGEAYGLIDQRARQIEAYNEALRI-KQDYDDAWVS 462
Query: 211 LLVAILM------ENNAYEKTLQ 227
L V + E AY K L+
Sbjct: 463 LGVVYGIAGREAEEREAYLKALR 485
>gi|406955606|gb|EKD84014.1| hypothetical protein ACD_39C00303G0002, partial [uncultured
bacterium]
Length = 675
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 152/363 (41%), Gaps = 20/363 (5%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +AI ++ + + + PE + LG+A+ LG A + AA+L+P DS +
Sbjct: 52 YNKGEDSKAIDYWEKCLEVRSHDPEIHFKLGIAYYNLGKEDQAISLWEKAANLNPDDSDI 111
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ +L KG +++ ++I PK+ +LA + + Y++A + +++
Sbjct: 112 FFRLGVAYYNKGLDDKSVIAFSKSIELNPKNSEAHNNLAIVFYRLEMYQQAIDEWKKALA 171
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P + + K Q +I ++ L + P ++++ L + + + EK
Sbjct: 172 LSPRQPEIFNNLGNAYSKLNQHREAIETWQKILDLTPENSEVYF--KLGSAYGKLDDLEK 229
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
++ E + + E L G+ GN +KA + ++ K + D AD+ +
Sbjct: 230 AIKSWEKCISLNPNDIEAHFNL----GVAQYNSGNFQKAITYWTTVREKRSED-ADICEK 284
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
+ + L A K+++ + +D+ L+ KL Y L + AI + KA++
Sbjct: 285 IGNAYCGLEDFAEAAKFWN-RAISYVSDDPQLHHKLGIAYSKLNKTQEAIFQWQKAIEID 343
Query: 345 EDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIY 404
D+ +A L + +EA+ K + D + + KL H Y
Sbjct: 344 SDHFEAHHNLGIAYYNLQRFDEALNEWEKAKAQNPTDPD------------LYFKLGHAY 391
Query: 405 RAK 407
R K
Sbjct: 392 RQK 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 41 ASLQYAYGN---FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
++L AY N +++AI + K V++ +P E N LG+A+ G + A D + A L
Sbjct: 521 SNLATAYHNREMYDKAIEIWKRVIKYNPQDSEARNKLGIAYYNKGMYDQAIDLWKKAIEL 580
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+PKD+A + + T +KG +A+ + + +PK I + +LA Y + A +
Sbjct: 581 NPKDAAAYYNIGTEEFEKGRINEAITAYMKVLEIDPKFIQVYYNLAVIYARKRQFRDAVD 640
Query: 158 SYEQIQKLFPDNVDA 172
+ + P V+A
Sbjct: 641 AARRFLNHTPTGVEA 655
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
++N P + LG A Q + AIS K + L PN P T+ LG A+ G
Sbjct: 375 AQNPTDPDLYFKLGHAYRQKR--KLDSAISSWKRTIELDPNNPNTHFVLGNAYDEKGLID 432
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A + L+P D L QK QA+ AIR P++ L L
Sbjct: 433 DAILAWRKVCELAPNDVDAHNNLGIAYFQKNMFDQAISEWEDAIRITPENGELYNKLGIA 492
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y+++ ++KA E +E+ K P++ D A + ++I I + +K +P D++
Sbjct: 493 YIKLELFDKAVECWEKALKYKPEDADILSNLATAYHNREMYDKAIEIWKRVIKYNPQDSE 552
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 3/175 (1%)
Query: 29 KLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L+P + Y N F+QAIS ++ +R++P E YN LG+A+ L A
Sbjct: 443 ELAPNDVDAHNNLGIAYFQKNMFDQAISEWEDAIRITPENGELYNKLGIAYIKLELFDKA 502
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ + A P+D+ + L T + +A+ ++ I+ P+D R L Y
Sbjct: 503 VECWEKALKYKPEDADILSNLATAYHNREMYDKAIEIWKRVIKYNPQDSEARNKLGIAYY 562
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDA-TKTGAQLFLKCGQTARSIGILEEYLKVHP 201
G Y++A + +++ +L P + A G + F K G+ +I + L++ P
Sbjct: 563 NKGMYDQAIDLWKKAIELNPKDAAAYYNIGTEEFEK-GRINEAITAYMKVLEIDP 616
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 73/156 (46%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
++AI ++ + + + E ++ LG+A+ L A + + A +P D L+ +L
Sbjct: 330 QEAIFQWQKAIEIDSDHFEAHHNLGIAYYNLQRFDEALNEWEKAKAQNPTDPDLYFKLGH 389
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
QK A+ ++ I +P + + L + Y E G + A ++ ++ +L P++V
Sbjct: 390 AYRQKRKLDSAISSWKRTIELDPNNPNTHFVLGNAYDEKGLIDDAILAWRKVCELAPNDV 449
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
DA + + ++I E+ +++ P + +L
Sbjct: 450 DAHNNLGIAYFQKNMFDQAISEWEDAIRITPENGEL 485
>gi|428223794|ref|YP_007107891.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
gi|427983695|gb|AFY64839.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
Length = 2232
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E AI+ + V L P+ +YN LG A A G A Y A L P W+
Sbjct: 99 GDLEGAIAHCQRAVALKPDYAGSYNNLGNALQAQGRIPEAIAAYRRAVELQP---GFWEA 155
Query: 108 LLTFA---VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L Q+G ++AM +QA++A+P + ++L + + E G++ ++ YE+
Sbjct: 156 LGNLGNNLRQQGQWSEAMACYQQALQAQPTALDPWLNLGAAWREGGNWAESIRCYERAIA 215
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P +A + + GQ +I E + + PS A+
Sbjct: 216 LHPQAAEAHSGLGITYKEAGQLEGAIACYERAIALQPSFAE 256
Score = 52.4 bits (124), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L Y G ++AI+L ++ + L PN E ++ LG+A G+ + A A L P +
Sbjct: 60 LAYQTGRGQEAIALYRQALALKPNYAEVHSNLGVALKEAGDLEGAIAHCQRAVALKPDYA 119
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
+ L +G +A+ R+A+ +P +L + + G + +A Y+Q
Sbjct: 120 GSYNNLGNALQAQGRIPEAIAAYRRAVELQPGFWEALGNLGNNLRQQGQWSEAMACYQQA 179
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ P +D + + G A SI E + +HP A+
Sbjct: 180 LQAQPTALDPWLNLGAAWREGGNWAESIRCYERAIALHPQAAE 222
Score = 52.4 bits (124), Expect = 9e-04, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 71/161 (44%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y +EQAI+L + V+ L+P +PE ++ LG G + A Y A L+P+ +
Sbjct: 684 YQTQQYEQAIALNQRVIALNPAVPEAHSNLGAVFLTQGRLEEAVACYQRAIALNPQYADA 743
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L ++ +A+ ++++ P+ + +L + E G + +A + Q
Sbjct: 744 YNNLGVALRRQKKLPEAIAAHQRSLELNPRSAEAQNNLGAALQEQGQWAEALPYHAQAIA 803
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P DA + G +I E+ + + PS AD
Sbjct: 804 LNPQYADAYSDWGNAQRELGHLPEAIQRYEQAIALQPSHAD 844
Score = 49.7 bits (117), Expect = 0.006, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 63/154 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ + + L+P + YN LG+A A + + L+P+ +
Sbjct: 721 GRLEEAVACYQRAIALNPQYADAYNNLGVALRRQKKLPEAIAAHQRSLELNPRSAEAQNN 780
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++G A+A+ Y QAI P+ + E+G +A + YEQ L P
Sbjct: 781 LGAALQEQGQWAEALPYHAQAIALNPQYADAYSDWGNAQRELGHLPEAIQRYEQAIALQP 840
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ DA A L G R E ++ P
Sbjct: 841 SHADAHLGLATSLLTAGDYRRGFAEYEWRWQLLP 874
Score = 47.8 bits (112), Expect = 0.018, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 50/120 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + V L P+ E Y GLA AL A A L P+ + W
Sbjct: 1241 GRLEEAIAHYAQAVSLKPDYAEAYGNWGLALQALQRLDEAIAVGQRAVELQPQFAEGWVS 1300
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + D +QA+ + +A+ +P+ + R +L + GD A Y L P
Sbjct: 1301 LGVAYQAQQDYSQAIAHYERALALDPQHLRARYNLGVIAQDHGDLATAIAHYRHTVALQP 1360
Score = 45.1 bits (105), Expect = 0.15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 56/138 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ ++I + + L P E ++ LG+ + G + A Y A L P +
Sbjct: 201 GNWAESIRCYERAIALHPQAAEAHSGLGITYKEAGQLEGAIACYERAIALQPSFAEAHNN 260
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G +A+ +QA+ +P+ + +L E G A Y Q L P
Sbjct: 261 LGNAFQIQGRLQEAIACYQQALTHQPRYVQAHSNLGVVLQEAGQVAAAIAQYRQALALDP 320
Query: 168 DNVDATKTGAQLFLKCGQ 185
++VD + L GQ
Sbjct: 321 ESVDTHNNLSLALLLTGQ 338
Score = 42.4 bits (98), Expect = 0.84, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 46 AYGNF----------EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
AYGN+ ++AI++ + V L P E + +LG+A+ A ++ A Y A
Sbjct: 1263 AYGNWGLALQALQRLDEAIAVGQRAVELQPQFAEGWVSLGVAYQAQQDYSQAIAHYERAL 1322
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P+ L A GD A A+ + R + +P + +A + GD
Sbjct: 1323 ALDPQHLRARYNLGVIAQDHGDLATAIAHYRHTVALQPSFAEGQFAIAFALLLQGDLVAG 1382
Query: 156 AESYEQIQKL 165
+YE KL
Sbjct: 1383 FRAYEWRWKL 1392
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
+A+ ++ + L P+ P +N G LG +A Y A L P+ + L +
Sbjct: 1727 EALQFYQQGLTLEPDNPRLHNNFGNVLRELGQMPAAVQHYQRAIALDPRYGEAYCNLGSV 1786
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ A A+ RQA++ +P + +L + ++ ++ A E Y++ L PD
Sbjct: 1787 LHAQEQFAAAVTQYRQALQHKPSLLEAHYNLGAALQKLNQFDAALECYQRAIALQPD--- 1843
Query: 172 ATKTGAQLFLKCGQTARSIGILEE 195
Q + G + +G EE
Sbjct: 1844 ----APQPYQNLGTALQELGRYEE 1863
Score = 39.7 bits (91), Expect = 5.2, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E AI+ + + L P+ E +N LG A G + A Y A P+
Sbjct: 235 GQLEGAIACYERAIALQPSFAEAHNNLGNAFQIQGRLQEAIACYQQALTHQPRYVQAHSN 294
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
L + G A A+ RQA+ +P+ + +L+ + G + YE
Sbjct: 295 LGVVLQEAGQVAAAIAQYRQALALDPESVDTHNNLSLALLLTGQLREGFAEYE 347
Score = 38.9 bits (89), Expect = 9.1, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P + + + L T Q+GD + ++R+AI +P + +LA+ E G E+A
Sbjct: 1190 PDEPRILELLGTLRCQQGDVVEGESHLRRAIALQPDFAAAHGNLANALKEQGRLEEAIAH 1249
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
Y Q L PD +A + +I + + +++ P A+ + L VA +
Sbjct: 1250 YAQAVSLKPDYAEAYGNWGLALQALQRLDEAIAVGQRAVELQPQFAE-GWVSLGVAYQAQ 1308
Query: 219 NNAYEKTLQHIEHA 232
+ Y + + H E A
Sbjct: 1309 QD-YSQAIAHYERA 1321
>gi|367027528|ref|XP_003663048.1| hypothetical protein MYCTH_51006 [Myceliophthora thermophila ATCC
42464]
gi|347010317|gb|AEO57803.1| hypothetical protein MYCTH_51006 [Myceliophthora thermophila ATCC
42464]
Length = 996
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 180/449 (40%), Gaps = 81/449 (18%)
Query: 7 GGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
GG + K R+ G RK +K L P + + A+ + ++++ I+ L EV+R++
Sbjct: 74 GGRKPKPRRTT---GPRKAAK--LPPDIQFRMSLANEAFQQKDYDKTIAHLSEVIRINSE 128
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQ----------KG 116
+ + L H LGN + A + AAHL+P+D A W +A++ +
Sbjct: 129 VFNAWMLLSTVHETLGNREQAIWCRISAAHLTPRDVAQWISTAEYALECLEELEDGTPEK 188
Query: 117 DTAQAMYYI--RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATK 174
D A Y QA+ + +I+ R A + G+ KA Y++ P N+ +
Sbjct: 189 DEVLARAYACYTQALETDRSNITARTGRADVIMMQGNSSKALAEYQKALSYRPWNIRTVR 248
Query: 175 TGAQLFLKCGQTARSIGI-------LEEYLKVHPSD---------ADLSVIDLLVAILME 218
A + L + I L ++L+ + +DL + IL +
Sbjct: 249 NIADVALDVKDRRKGADIARGAYRRLIDHLQAEGTFEAEEGWFEWSDLRIYLEFFTILEQ 308
Query: 219 ----------------------------NNAYEKTLQHIEHAQIVRFSGKELP------- 243
++ E +Q ++ F P
Sbjct: 309 WQEGVRELKEISRWLLGRKTETYWDRWLDDDREWDIQDDRRIEVPEFEPARFPPQSYGQG 368
Query: 244 --LKLKVKAGICYLRLGNMEKAEI---LFADLQWKNAIDHADLITEVADTLMSLGHSNSA 298
+ L+ K + +LG+ +A + L + ++ +D D + ++A TL+ + A
Sbjct: 369 LPVDLRAKLYVYRSKLGSEYEANLHLQLLDPTRQEDFMDFPDCLKDIAVTLLDRDRPDEA 428
Query: 299 LKY---YHFLETNAG--TDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLT 353
++Y Y + G T + + +++ E+A A F A++ ED+I+AR+
Sbjct: 429 IRYLDLYRHIAMTTGDITLDADFSVCQGRYHMARGEKAAAEECFIAAIEEDEDHIEARVQ 488
Query: 354 LASLLL-EEAKE--EEAITLLSPPKDLDS 379
LA++ EE +E EEA L+ +L++
Sbjct: 489 LANMYEGEEMQEGREEAFLLVREAMNLEA 517
>gi|291190309|ref|NP_001167232.1| intraflagellar transport protein 88 homolog [Salmo salar]
gi|223648786|gb|ACN11151.1| Intraflagellar transport protein 88 homolog [Salmo salar]
Length = 845
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ ++P P+ LG + + G+ AF +Y + P + + + L +
Sbjct: 569 QAIEWLMQLITVTPTDPQVLAKLGELYDSEGDKSQAFQYYQESFRYFPSNIDVIEWLGAY 628
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS Y G+Y+KA E+Y+ I + FP+N++
Sbjct: 629 YIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPENIE 688
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 689 CLRFLVRLCTDMG 701
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 42/238 (17%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAA 95
++ + + + ++E+A KE +R + E LGL + LG + + D F + A
Sbjct: 486 LINKGNTVFVKKDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEESLDCFLKLHA 545
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L +W QL D QA+ ++ Q I P D + L Y GD +A
Sbjct: 546 ILRNSAQVMW-QLANLFEMLEDPHQAIEWLMQLITVTPTDPQVLAKLGELYDSEGDKSQA 604
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
+ Y++ + FP N+D VI+ L A
Sbjct: 605 FQYYQESFRYFPSNID------------------------------------VIEWLGAY 628
Query: 216 LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
++ EK +Q+ E A ++ + +K ++ CY R GN +KA + D+ K
Sbjct: 629 YIDTQFCEKAIQYFERATLI----QPTQVKWQLMVASCYRRSGNYQKALETYKDIHRK 682
>gi|323452442|gb|EGB08316.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
Length = 1151
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P LG A ++ G+ E+AI+ + + L P+ +N LG A G A Y
Sbjct: 332 PDACNNLGNALREH--GDLEEAIACYRRALLLRPDHAHAHNNLGNAMKDKGLVNEAIQCY 389
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A L+P+ +A L ++G A+ + R+AI +P+ ++ + Y ++G
Sbjct: 390 ATAVGLAPRFAAAHSNLGLVLKERGTVDDALAHYREAIAVDPQFADAYSNMGNAYKDLGR 449
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ A Y + KL PD DA A + G+ A ++ L++ P +D
Sbjct: 450 LDDAIRCYGEALKLRPDFADACSNLAAAYKDGGRHAEAVACYRRALELKPDFSD 503
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 12/237 (5%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+ +L ++ + G +E ++ +P + E+Y+ L A LG+ + A Y+
Sbjct: 94 IDSLLLLGAVHFQLGRWEDCARHTLRCIKRAPGVAESYSNLANALKELGDPRGAKRLYLK 153
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L P+ + + L + + G+T +A+ A+ +P R HL + G +
Sbjct: 154 AIALKPRFTDAYNNLASAHLHLGETREALETYEAALLVDPSLAETRCHLGHLHRAAGRRD 213
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
A Y + P+ A A ++ + G+ + E ++ PS D L
Sbjct: 214 VAEHCYAEALACAPNLAAAWCALAAIYKERGRLDDAAAYYREAIRRKPSAFDAH--SNLG 271
Query: 214 AILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAG---ICYLRLGNMEKAEILF 267
+L E + + E+A+ + EL V G CY G++E+A +F
Sbjct: 272 NVLKEQGKVDAAIA--EYARAI-----ELNPGFAVAHGNLASCYFEKGDLERAIRIF 321
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 2/196 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS G +A+ + + + P+L ET LG H A G A Y A +P
Sbjct: 169 ASAHLHLGETREALETYEAALLVDPSLAETRCHLGHLHRAAGRRDVAEHCYAEALACAPN 228
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+A W L ++G A Y R+AIR +P +L + E G + A Y
Sbjct: 229 LAAAWCALAAIYKERGRLDDAAAYYREAIRRKPSAFDAHSNLGNVLKEQGKVDAAIAEYA 288
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ +L P A A + + G R+I I L + P+ D + L L E+
Sbjct: 289 RAIELNPGFAVAHGNLASCYFEKGDLERAIRIFRVALDIEPNFPD--ACNNLGNALREHG 346
Query: 221 AYEKTLQHIEHAQIVR 236
E+ + A ++R
Sbjct: 347 DLEEAIACYRRALLLR 362
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 75/193 (38%), Gaps = 12/193 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + A + +E +R P+ + ++ LG G +A Y A L+P +
Sbjct: 244 GRLDDAAAYYREAIRRKPSAFDAHSNLGNVLKEQGKVDAAIAEYARAIELNPGFAVAHGN 303
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +KGD +A+ R A+ EP +L + E GD E+A Y + L P
Sbjct: 304 LASCYFEKGDLERAIRIFRVALDIEPNFPDACNNLGNALREHGDLEEAIACYRRALLLRP 363
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-----SVIDLLVAILMENNAY 222
D+ A G + G++ E ++ + + L + L +L E
Sbjct: 364 DHAHAHNN-------LGNAMKDKGLVNEAIQCYATAVGLAPRFAAAHSNLGLVLKERGTV 416
Query: 223 EKTLQHIEHAQIV 235
+ L H A V
Sbjct: 417 DDALAHYREAIAV 429
>gi|389581569|ref|ZP_10171596.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
gi|389403204|gb|EIM65426.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
Length = 334
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE+A+ LL+ + + P + YN LGLA+ L H+ A + A +P +
Sbjct: 59 GAFEEAVLLLQRAIGVVPENEDAYNNLGLAYFQLEQHERAQRAFETAIRYNPSHHSASFN 118
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G+ A+ + +R P+ +LA Y +G ++A Y K
Sbjct: 119 LGVLYQSRGNWGAAVDTYKNHLRNHPRHPEALYNLAVAYNALGMLDQAETYYHLAIKQSG 178
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
N DA QL+L+ Q R++ +LE L++ P
Sbjct: 179 ANADALVNLGQLYLRKRQADRALAVLERALEIEP 212
>gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
Length = 125
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%)
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
N E + LG A+ G+++ A ++Y A L P +++ W L ++GD +A+ Y
Sbjct: 7 NSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYY 66
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKT 175
++A+ +P + + Y + GDY+KA E Y++ +L P+N A +
Sbjct: 67 QKALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQN 116
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 97 LSPKDSA-LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ P +SA WK L ++GD +A+ Y ++A+ +P + S +L + Y + GDY+KA
Sbjct: 3 MDPGNSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKA 62
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
E Y++ +L P+N A + K G ++I ++ L++ P++A
Sbjct: 63 IEYYQKALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNA 111
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 30 LSPGVT----KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
+ PG + K LG A Y G++++AI ++ + L PN + LG A+ G+++
Sbjct: 3 MDPGNSAEAWKNLGNAY--YKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQ 60
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
A ++Y A L P ++ W + ++GD +A+ ++A+ +P + + +L +
Sbjct: 61 KAIEYYQKALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLGN 119
>gi|50304701|ref|XP_452306.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|12656113|gb|AAK00752.1|AF229182_1 transcription factor Tfc4p [Kluyveromyces lactis]
gi|49641439|emb|CAH01157.1| KLLA0C02453p [Kluyveromyces lactis]
Length = 1028
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 171/460 (37%), Gaps = 103/460 (22%)
Query: 12 KTRKLNKKRGRRKGSKNK------LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSP 65
K RK K G + G K L P V ++L EA+ Y + + A L +V++
Sbjct: 83 KRRKGKKSAGTKHGPVPKQRRERPLDPEVAQLLSEANEAYVRNDIQVAEQLYNKVIKADA 142
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
Y TLG + G + + +AAHL+ D WK + + + QA+Y
Sbjct: 143 KNFAAYKTLGDIYHLQGRFNDCCNSWFLAAHLNSTDWEFWKMVAELSAELAHVRQAIYCY 202
Query: 126 RQAIRA----------------------------------EPKDISLRIHLASFYVEIGD 151
+AIR +P D ++ LA YVE
Sbjct: 203 TRAIRINNEEWECIYNRALLYKEIGQLGRAFDGFQKLYAYDPLDANILRELAVIYVE--- 259
Query: 152 YEKAAESYEQIQKLFPDNV-----------DATKTGAQLFLKCGQTARSIGILEEYLKVH 200
Y + +E+ E K+F DNV DA + + + + + + +E L ++
Sbjct: 260 YNRVSEAIELYMKVFGDNVTRRNAFILASEDAIDSENESEEETEEGDEDLNLTQEELDMY 319
Query: 201 PSDA-------------DLSVIDLLVAILMENNA----------------YEKTLQHIE- 230
P+ + D S +++L + ++ N Y +T E
Sbjct: 320 PNVSVKKIAKKHRCIPFDWSSLNILAELFIKQNGELHGIKTIKKCARWIQYRETQTFWED 379
Query: 231 -------------HAQIVRFSGKE------LPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
+A+ + +E LP+ ++V+ G+ L N+ +A F L
Sbjct: 380 VYDDSEFDNRRFRNAKFQSLTEREKSKSYSLPIDIRVRLGLLRLNNKNVSEAMQQFQFLY 439
Query: 272 WKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERA 331
+ + ADL EV L L A+ + L D LY L++C+ L +
Sbjct: 440 EEKFDEIADLYFEVGVQLCKLDRYQEAIDFLAPLSQLDEYDTIELYRPLSKCFRELDQLE 499
Query: 332 HAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLL 371
+A F K ++ +++ +L+LA + E+E LL
Sbjct: 500 NARDAFEKLVEFDPSDLEHKLSLAEVHHSLGNEDEFDKLL 539
>gi|19705260|ref|NP_602755.1| O-linked GlcNAc transferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713219|gb|AAL94054.1| O-linked GLCNAC transferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 709
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 152/368 (41%), Gaps = 34/368 (9%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
YGN+ +A LLK ++ S N Y+ LG + G + A + Y A L+ D+ ++
Sbjct: 69 YGNYTEAEVLLKNIINKSKNDEWLYSELGYCLAEQGKQEEALESYFKAIELNRNDAWIFT 128
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
++ +A+ Y +A+ + DI + +A Y +G++EKA + E++++L
Sbjct: 129 RIGMCYKNMDRKEEAIEYYLKALEQKEDDIFIMSDIAWLYDSLGEFEKALKYLERLEELG 188
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-NAYEKT 225
++ + K + +I + L+ D D + I + + Y++
Sbjct: 189 QNDAWTSTEYGYCLAKLKRFDEAIVKINRALEAEDEDKDTAYIYSQLGWCQRHLEKYDEA 248
Query: 226 LQHIEHAQIVRFSGKELPLKL---------KVKAGICYLRLGNMEKAEI-LFADLQW--- 272
++ A+ + + ++L K KA YL+ +K +I L +D+ W
Sbjct: 249 IETFLKAKKWARNDAWINIELGHCYKAKNEKEKALEFYLKAEKFDKNDISLLSDIAWHYD 308
Query: 273 ------------KNAI----DHADLITEVADTLMSLGHSNSALKYYHFLET--NAGTDNG 314
K + D A + E L LG A+K Y + + G D
Sbjct: 309 ALDRNEEALKYIKRVVRLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALSLDEEGKDER 368
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKA--LDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
Y+ +L CY L+E AI F KA L R + I+ + + LEE ++ L++
Sbjct: 369 YINSQLGWCYRQLEEYKKAIKFHKKAKELGRNDIWINMEIGMCYAKLEEYEKAAENYLIA 428
Query: 373 PPKDLDSL 380
D D +
Sbjct: 429 YEMDRDDI 436
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 254 YLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALK-YYHFLETNAGTD 312
Y R GN +AE+L ++ K+ D L +E+ L G AL+ Y+ +E N +
Sbjct: 66 YDRYGNYTEAEVLLKNIINKSKNDEW-LYSELGYCLAEQGKQEEALESYFKAIELN--RN 122
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNI 348
+ +++ ++ CY ++ + AI ++ KAL++ ED+I
Sbjct: 123 DAWIFTRIGMCYKNMDRKEEAIEYYLKALEQKEDDI 158
>gi|116622726|ref|YP_824882.1| hypothetical protein Acid_3625 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 547
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 6/222 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FEQA E V+L P E++ LG+ G+ A Y A P A
Sbjct: 280 GRFEQAAEAYSECVKLRPQSCESHTNLGIVREQTGDTAGARSSYERAIKAGPDALAPLWN 339
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G ++ Y +Q + PK+ R + ++ DY AAE++E K P
Sbjct: 340 LALLLEHAGQFEESERYYKQVLDRAPKEEEARFRMGFLRLQREDYRGAAEAFEGCLKYRP 399
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+A A + G+ + + E+ L P D + L A+ ++ N Y+ L+
Sbjct: 400 AWPEAHANLALAYSGMGERDHAERLYEKMLDADPKSMD--ALRGLAALSIQANDYDTALE 457
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
H +++ G P ++ AG+ Y + G +K+ L+ D
Sbjct: 458 F--HVRLIDL-GDRTP-EVLYNAGLMYEKAGQQDKSVRLYRD 495
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
GS++ L+ VT L G E+A+ L+ + + E Y +G LG+
Sbjct: 27 GSQSHLARAVTLHLA--------GRREEALKQLQRAIAANEASAEIYRAMGHIQFELGSF 78
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
A Y I + P+ S W L + G A +A EP + + L
Sbjct: 79 DEAAKSYRILVQVKPQYSMGWFNLAVCLERAGVWEDAAQSFHRAATLEPGYLDAHLGLGV 138
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
++ D + A S+++ +L +VDA A G + I ++ L+ +P
Sbjct: 139 CHLRQEDPKSALFSFDRCLELNASHVDAQFGKAVALQSLGHAEDASQIYQKILEKNPDSE 198
Query: 205 DLSVIDLLVAILMENNAYEKTLQHIEH 231
D + L+ I M ++ ++ EH
Sbjct: 199 D--SLSNLILIGMAKEDFDMVREYSEH 223
>gi|356556372|ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 149/388 (38%), Gaps = 89/388 (22%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPET--------------------------- 70
LG +Y G FE+A + V++L P E+
Sbjct: 201 LGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIMDLRTNEATGIRTGMVKMQRA 260
Query: 71 ---YNTLGLAHSALGNHKSAFDFYVIAAHL---------------SPKDSALWKQLLTFA 112
Y +A + L NH F+ H P S + L
Sbjct: 261 FEIYPYCAMALNYLANH-----FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
Query: 113 VQKGDTAQAMYYIRQAIRA--EPKDISLRIH-LASFYVEIGDYEKAAESYEQIQKLFPDN 169
KGD +A Y +++ +P + + L +++GD++ A ++E++ +++PDN
Sbjct: 316 HSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKSALSNFEKVLEVYPDN 375
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--LSVIDLLVAILMENNAYEKTLQ 227
+ K ++++ GQT + + + K+ P DA L + +LL IL + A L
Sbjct: 376 CETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL--ILSDTGA---ALD 430
Query: 228 HIEHAQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF----ADLQW--------KN 274
+ A + + G+E+P++L G+ G E A F D W K+
Sbjct: 431 AFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVWLSFINEENKS 490
Query: 275 AIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGT-----DNGYLYLKLAECYLSLKE 329
+ID A + D ++ +H LE+N D + LA L +
Sbjct: 491 SIDAATSTLQFKD-----------MQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYD 539
Query: 330 RAHAIMFFYKALDRFEDNIDARLTLASL 357
A +F+ L ++ D IDA L LA++
Sbjct: 540 SGTASIFYRLILFKYPDYIDAYLRLAAI 567
>gi|338811928|ref|ZP_08624129.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
gi|337276073|gb|EGO64509.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
Length = 298
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++A++ + + L P E +N G+A+S G++ +A Y A L PK + +
Sbjct: 124 GDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAITDYTRAIALQPKYATAYYN 183
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KGD +A+ QAI P+D S + A+ YV GDY+KA Y L P
Sbjct: 184 RGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDYDKAITDYSLATTLDP 243
Query: 168 D 168
D
Sbjct: 244 D 244
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 1/176 (0%)
Query: 30 LSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+ PG + LQY + ++ +AI+ + + L+P + Y G A+ G + +A
Sbjct: 37 VKPGAEEHWFNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAI 96
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
Y L+P++ W+ +KGD +A+ Q I EP++ + Y +
Sbjct: 97 ADYTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSD 156
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
GDY+ A Y + L P A + G ++I + + ++P DA
Sbjct: 157 KGDYDTAITDYTRAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDA 212
>gi|116622427|ref|YP_824583.1| hypothetical protein Acid_3324 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225589|gb|ABJ84298.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 783
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 45/323 (13%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +A+ L+ VV +P P + LG AH+A G W+Q
Sbjct: 372 GDVAKALQELQAVVTRAPENPVSRYNLGRAHAARGE---------------------WEQ 410
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
A +AI P + R+ LA V G++E A ++ E+I K
Sbjct: 411 -------------ARQQFAKAIELRPDYVLARLALAQLQVTRGEFEAALKTAEEILKFDK 457
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
NV+A + + + S +L+ LK +P D+ + L V L EN +
Sbjct: 458 GNVNARLIESAALMGQKKFGDSRVMLDAMLKTNPGSPDV-LFQLGVVNLAEN-------K 509
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLG-NMEKAEILFADLQWKNAIDHADLITEVA 286
E R + + P + GI + N + + + + + DL+T +
Sbjct: 510 FKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKTEEAVKLLQAESDKSPNRTDLLTALG 569
Query: 287 DTLMSLGHSNSALKYYHFL--ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
+T + G + A++ ++ + +T+ G G +YL+L E Y + AI KA +
Sbjct: 570 NTAVRAGKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETYRRKGDLNGAIQALQKARESL 629
Query: 345 EDNIDARLTLASLLLEEAKEEEA 367
DNI TLA +L ++ EA
Sbjct: 630 PDNIIVLSTLALVLDAASRRPEA 652
>gi|158522430|ref|YP_001530300.1| hypothetical protein Dole_2419 [Desulfococcus oleovorans Hxd3]
gi|158511256|gb|ABW68223.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 792
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 1/184 (0%)
Query: 22 RRKGSKNKLSPGVTKMLGEA-SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
R S L+PG L A SL A GN QA++L ++ + ++P ET+N LG+A
Sbjct: 548 RHVNSALDLNPGYDLALNLAGSLHMACGNTGQAVALYRKALAITPLSAETFNNLGIALHR 607
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
G+ A F+ A +P + L A+ + QA+ A P D +
Sbjct: 608 QGDSGQAMTFFRRALERNPGFADAASNLEKIEAALETYGLAIRALEQAVAASPGDPARLF 667
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
L Y +G +KA +YE+ L PD+ L+ ++I E+ ++
Sbjct: 668 QLGRLYAAVGMQDKALAAYEKTIVLKPDDAACLNALGTLYADICDIQKAITCFEKLARLA 727
Query: 201 PSDA 204
P +A
Sbjct: 728 PDNA 731
>gi|384109750|ref|ZP_10010615.1| Tetratricopeptide repeat-containing protein [Treponema sp. JC4]
gi|383868693|gb|EID84327.1| Tetratricopeptide repeat-containing protein [Treponema sp. JC4]
Length = 1005
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 118/259 (45%), Gaps = 19/259 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++ + ++L + + + + LG + N++ A D + ++P+D
Sbjct: 85 GRYDDSTAILMKALETGEKQQDVFYNLGFTFKEMKNYEDAVDAFENVISVNPRDVLAHNH 144
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + + G+ +A+ ++ ++ +P L +LA Y ++ +Y A YE K P
Sbjct: 145 LGSIYYETGELDKAVNAYKRGLQIDPNHPILHYNLARTYAKLKNYPDAIRGYEAALKTRP 204
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ +A + + L +KC ++ + I+++ +K+HP+D +L + L + + Y+ +
Sbjct: 205 NWPEAIRHFSNLLIKCQKSVEAARIVKQSIKIHPNDPEL--LYTLGQVYLNQFDYDNAKK 262
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA--EILFADLQWKNAID----HADL 281
+ A V+ + +++ Y + +KA IL NAID + D+
Sbjct: 263 TFKQANAVKAND----VRILTALASAYEKADESDKALDTIL-------NAIDLEPLNNDV 311
Query: 282 ITEVADTLMSLGHSNSALK 300
+ DTL+S+ NSA +
Sbjct: 312 RLQYVDTLLSVNDYNSAFE 330
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 103/229 (44%), Gaps = 9/229 (3%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
S+ Y G ++A++ K +++ PN P + L ++ L N+ A Y A P
Sbjct: 146 GSIYYETGELDKAVNAYKRGLQIDPNHPILHYNLARTYAKLKNYPDAIRGYEAALKTRPN 205
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ ++ + +A ++Q+I+ P D L L Y+ DY+ A ++++
Sbjct: 206 WPEAIRHFSNLLIKCQKSVEAARIVKQSIKIHPNDPELLYTLGQVYLNQFDYDNAKKTFK 265
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP--SDADLSVIDLLVAILME 218
Q + ++V A + K ++ +++ + + + P +D L +D L+++
Sbjct: 266 QANAVKANDVRILTALASAYEKADESDKALDTILNAIDLEPLNNDVRLQYVDTLLSVNDY 325
Query: 219 NNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
N+A+E T++ + GK+ +K+ G Y+ G EKAE F
Sbjct: 326 NSAFE-TIESMNDDS----DGKD--VKVMDLYGQYYITQGQDEKAEEYF 367
>gi|192291131|ref|YP_001991736.1| hypothetical protein Rpal_2752 [Rhodopseudomonas palustris TIE-1]
gi|192284880|gb|ACF01261.1| TPR repeat-containing protein [Rhodopseudomonas palustris TIE-1]
Length = 556
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++ + ++L PNLP + G A LG+ A Y A L PK+S
Sbjct: 116 GKPDRALADADQAIKLDPNLPLAHFVRGSAELKLGHDDRAIADYSRAIELRPKESGEVYA 175
Query: 108 LLTFAV-QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ FA +KGD +A+ +A++A P+D+ ++ + D AA Y + KL
Sbjct: 176 VRGFAYHRKGDDIRALADYTEALKAAPEDVGTLLNRGDARRNLRDTAGAAADYSEAIKLA 235
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-----SVIDL----LVAILM 217
P N K + L T ++ E +++ PS++ L S + L L+A+
Sbjct: 236 PGNAGGFKGRGFIRLLTQDTGGAVADFTEAIRLSPSESGLYLNRASALGLQNQSLLALAD 295
Query: 218 ENNAYEKTLQH----IEHAQIVRFSGKELPLKLKV 248
E+ A QH + A+ ++ G ++ + V
Sbjct: 296 EDMAIRLEPQHPLAYVNRAETLKLLGDKVAARASV 330
>gi|124022005|ref|YP_001016312.1| hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT
9303]
gi|123962291|gb|ABM77047.1| Hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT
9303]
Length = 1676
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 164/418 (39%), Gaps = 44/418 (10%)
Query: 3 LINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVR 62
LIN GG K L++ S T ++ + GN +QA++ + +
Sbjct: 682 LINLGGIYKDLGNLDQALASTLKSLELKPDNPTALINLGGIYQDLGNLDQALASTLKSLE 741
Query: 63 LSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAM 122
L P+ P LG + LGN A + + L P + L G+ QA+
Sbjct: 742 LKPDNPTAQMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQAL 801
Query: 123 YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK 182
+++ +P + + ++L Y ++G+ ++A S + +L PDN D ++
Sbjct: 802 ASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKD 861
Query: 183 CGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL 242
G +++ + L++ P + D ++I+L K L +++ A EL
Sbjct: 862 LGNLDQALASTLKSLELKPDNPD-TLINL--------GGIYKDLGNLDQALASTLKSLEL 912
Query: 243 ----PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSA 298
P L + G Y LGN+++A + + +L + DTL++LG
Sbjct: 913 KPDNPDTL-INLGGIYKDLGNLDQA--------LASTLKSLELKPDNPDTLINLGGIYKD 963
Query: 299 LKYYHFLETNAGT--------DNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
L + + A T DN ++ L Y L A+ K+L+ DN D
Sbjct: 964 LD--NLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPDT 1021
Query: 351 RLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKG 408
+ L + + ++A+ L SL++ D N ++ L IY+ G
Sbjct: 1022 LINLGGIYKDLGNLDQALA-----STLKSLELKPD-------NPDTLINLGGIYKDLG 1067
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 147/368 (39%), Gaps = 34/368 (9%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN +QA++ + + L P+ P + LG + LGN A + + L P +
Sbjct: 795 GNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPDTLIN 854
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ QA+ +++ +P + I+L Y ++G+ ++A S + +L P
Sbjct: 855 LGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKP 914
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
DN D ++ G +++ + L++ P + D ++I+L K L
Sbjct: 915 DNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPD-TLINL--------GGIYKDLD 965
Query: 228 HIEHAQIVRFSGKELPLK-----LKVKAGICYLRLGNMEKA-EILFADLQWKNAIDHADL 281
+++ A K L LK + G Y LGN+++A L+ K D+ D
Sbjct: 966 NLDQALASTL--KSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELK--PDNPDT 1021
Query: 282 ITEVADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
+ + LG+ + AL LE DN + L Y L A+ K+
Sbjct: 1022 LINLGGIYKDLGNLDQALASTLKSLELKP--DNPDTLINLGGIYKDLGNLDQALASTLKS 1079
Query: 341 LDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKL 400
L+ DN D + L + + ++A+ L SL++ D N M L
Sbjct: 1080 LELKPDNPDTLINLGGIYQDLGNLDQALA-----STLKSLELQPD-------NPTAHMNL 1127
Query: 401 CHIYRAKG 408
IY+ G
Sbjct: 1128 GGIYQDLG 1135
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 151/370 (40%), Gaps = 38/370 (10%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN +QA++ + + L P+ P+T LG + LGN A + + L P +
Sbjct: 557 GNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMN 616
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ QA+ +++ +P + I+L Y ++G+ ++A S + +L P
Sbjct: 617 LGGIYQDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKP 676
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
DN D ++ G +++ + L++ P D ++I+L + L
Sbjct: 677 DNPDTLINLGGIYKDLGNLDQALASTLKSLELKP-DNPTALINL--------GGIYQDLG 727
Query: 228 HIEHAQIVRFSGKELPLK-----LKVKAGICYLRLGNMEKA---EILFADLQWKNAIDHA 279
+++ A K L LK ++ G Y LGN+++A + +L+ N H
Sbjct: 728 NLDQALASTL--KSLELKPDNPTAQMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHM 785
Query: 280 DLITEVADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
+L D LG+ + AL LE DN ++ L Y L A+
Sbjct: 786 NLGGIYKD----LGNLDQALASTLKSLELKP--DNPTAHMNLGGIYKDLGNLDQALASTL 839
Query: 339 KALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIM 398
K+L+ DN D + L + + ++A+ L SL++ D N ++
Sbjct: 840 KSLELKPDNPDTLINLGGIYKDLGNLDQALA-----STLKSLELKPD-------NPDTLI 887
Query: 399 KLCHIYRAKG 408
L IY+ G
Sbjct: 888 NLGGIYKDLG 897
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 159/413 (38%), Gaps = 36/413 (8%)
Query: 4 INYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRL 63
+N GG K L++ S T ++ + GN +QA++ + + L
Sbjct: 207 MNLGGIYKDLGNLDQALASTLKSLELQPDNPTALINLGGIYKDLGNLDQALASTLKSLEL 266
Query: 64 SPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMY 123
P+ P + LG + LGN A + + L P + L G+ QA+
Sbjct: 267 QPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALA 326
Query: 124 YIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
+++ +P + + ++L Y ++G+ ++A S + +L PDN D ++
Sbjct: 327 STLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDL 386
Query: 184 GQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL- 242
G +++ + L++ P + M + L +++ A EL
Sbjct: 387 GNLDQALASTLKSLELKPDNP---------TAHMNLGGIYQDLDNLDQALASTLKSLELK 437
Query: 243 ---PLKLKVKAGICYLRLGNMEKA---EILFADLQWKNAIDHADLITEVADTLMSLGHSN 296
P L + G Y LGN+++A + +L+ N H +L D LG+ +
Sbjct: 438 PDNPDTL-INLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKD----LGNLD 492
Query: 297 SAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLA 355
AL LE DN ++ L Y L A+ K+L+ DN D + L
Sbjct: 493 QALASTLKSLELKP--DNPTAHMNLGGIYQDLGNLDQALASTLKSLELQPDNPDTLINLG 550
Query: 356 SLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKG 408
+ + ++A+ L SL++ D N ++ L IY+ G
Sbjct: 551 GIYKDLGNLDQALA-----STLKSLELKPD-------NPDTLINLGGIYKDLG 591
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 161/414 (38%), Gaps = 36/414 (8%)
Query: 3 LINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVR 62
LIN GG + L++ S T + + GN +QA++ + +
Sbjct: 716 LINLGGIYQDLGNLDQALASTLKSLELKPDNPTAQMNLGGIYKDLGNLDQALASTLKSLE 775
Query: 63 LSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAM 122
L P+ P + LG + LGN A + + L P + L G+ QA+
Sbjct: 776 LKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQAL 835
Query: 123 YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK 182
+++ +P + I+L Y ++G+ ++A S + +L PDN D ++
Sbjct: 836 ASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKD 895
Query: 183 CGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKEL 242
G +++ + L++ P + D ++I+L K L +++ A EL
Sbjct: 896 LGNLDQALASTLKSLELKPDNPD-TLINL--------GGIYKDLGNLDQALASTLKSLEL 946
Query: 243 ----PLKLKVKAGICYLRLGNMEKA---EILFADLQWKNAIDHADLITEVADTLMSLGHS 295
P L + G Y L N+++A + +L+ N H +L D LG+
Sbjct: 947 KPDNPDTL-INLGGIYKDLDNLDQALASTLKSLELKPDNPTAHMNLGGIYKD----LGNL 1001
Query: 296 NSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTL 354
+ AL LE DN + L Y L A+ K+L+ DN D + L
Sbjct: 1002 DQALASTLKSLELKP--DNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINL 1059
Query: 355 ASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYRAKG 408
+ + ++A+ L SL++ D N ++ L IY+ G
Sbjct: 1060 GGIYKDLGNLDQALA-----STLKSLELKPD-------NPDTLINLGGIYQDLG 1101
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 143/367 (38%), Gaps = 32/367 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN +QA++ + + L P+ P + LG + LGN A + + L P +
Sbjct: 455 GNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMN 514
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ QA+ +++ +P + I+L Y ++G+ ++A S + +L P
Sbjct: 515 LGGIYQDLGNLDQALASTLKSLELQPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKP 574
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
DN D ++ G +++ + L++ P + M + L
Sbjct: 575 DNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNP---------TAHMNLGGIYQDLG 625
Query: 228 HIEHAQIVRFSGKEL----PLKLKVKAGICYLRLGNMEKA-EILFADLQWKNAIDHADLI 282
+++ A EL P L + G Y LGN+++A L+ K D+ D +
Sbjct: 626 NLDQALASTLKSLELKPDNPDTL-INLGGIYKDLGNLDQALASTLKSLELK--PDNPDTL 682
Query: 283 TEVADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
+ LG+ + AL LE DN + L Y L A+ K+L
Sbjct: 683 INLGGIYKDLGNLDQALASTLKSLELKP--DNPTALINLGGIYQDLGNLDQALASTLKSL 740
Query: 342 DRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLC 401
+ DN A++ L + + ++A+ L SL++ D N M L
Sbjct: 741 ELKPDNPTAQMNLGGIYKDLGNLDQALA-----STLKSLELKPD-------NPTAHMNLG 788
Query: 402 HIYRAKG 408
IY+ G
Sbjct: 789 GIYKDLG 795
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 149/365 (40%), Gaps = 28/365 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN +QA++ + + L P+ P + LG + LGN A + + L P +
Sbjct: 149 GNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELQPDNPTAHMN 208
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ QA+ +++ +P + + I+L Y ++G+ ++A S + +L P
Sbjct: 209 LGGIYKDLGNLDQALASTLKSLELQPDNPTALINLGGIYKDLGNLDQALASTLKSLELQP 268
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD--ADLSVIDLLVAILMENNAYEKT 225
DN A ++ G +++ + L++ P + A +++ + + + A T
Sbjct: 269 DNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALAST 328
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA-EILFADLQWKNAIDHADLITE 284
L+ +E ++ + L G Y LGN+++A L+ K D+ D +
Sbjct: 329 LKSLE----LKPDNPTAHMNL----GGIYQDLGNLDQALASTLKSLELK--PDNPDTLIN 378
Query: 285 VADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
+ LG+ + AL LE DN ++ L Y L A+ K+L+
Sbjct: 379 LGGIYKDLGNLDQALASTLKSLELKP--DNPTAHMNLGGIYQDLDNLDQALASTLKSLEL 436
Query: 344 FEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHI 403
DN D + L + + ++A+ L SL++ D N M L I
Sbjct: 437 KPDNPDTLINLGGIYKDLGNLDQALA-----STLKSLELKPD-------NPTAHMNLGGI 484
Query: 404 YRAKG 408
Y+ G
Sbjct: 485 YKDLG 489
>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
Length = 927
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-- 105
GN+++AI+ + + L P PE +N G+A S L N++ A Y A L P++S W
Sbjct: 91 GNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNKAIELDPQNSLFWYN 150
Query: 106 --KQLLTFAVQKGDT---AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
K L Q+ T +++ AI +P++ + S E+G+Y++A +Y
Sbjct: 151 KGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSALQELGNYQEAITAYN 210
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ +++P+ +A F G ++ + +++ P +
Sbjct: 211 KAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQN 253
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-- 105
G +E+A++ + + + P+ + G+A S+LGN++ A + A + ++S +W
Sbjct: 745 GRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDKALEIDSQNSLIWSN 804
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
K L F K + A Y + I + + + S + IG+YE+A ++Y + +L
Sbjct: 805 KGLALFEFGKYEEAVKAY--NKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYNKTIEL 862
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P+ A A L+ +SI L+ ++++P+ +++ +D L +N ++K
Sbjct: 863 DPEYSLAWYNRACLYSLINDKEQSISDLKRAIEINPAYKEMARVDSKFEHLWDNEEFKKL 922
Query: 226 LQHIE 230
L E
Sbjct: 923 LNITE 927
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 15/257 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+++AI + + + P P +N G+A S LG+++ + + A ++ S W
Sbjct: 404 GNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSYEESIKAFDKAIEINLSSSVTWAN 463
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G+ A+ ++I +P++ ++ + G+YE + ++ +L P
Sbjct: 464 KGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNKGNALYNSGEYEGVITACDKAIELDP 523
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
N+DA + G +I ++ L++ P D L+ + +A NN YE+ L+
Sbjct: 524 KNLDAWTNKGKALSSLGDYEEAIKAYDKALEIEPQDP-LTWNNREIAFGHLNN-YEEALR 581
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHA-DLITEVA 286
+ +IV S E P G+ GN E++ A D A +L E A
Sbjct: 582 -AHNREIV--SDSEDPEVSWNDKGLALYYSGNYEES---------VKAYDKAIELDPEYA 629
Query: 287 DTLMSLGHSNSALKYYH 303
D + G+S +LK Y
Sbjct: 630 DAWFNKGNSFFSLKNYE 646
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 69/157 (43%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y GN+E+A+ + + L P P + G A S L +++ A Y + L P++S
Sbjct: 231 YNSGNYEEAVKACNKTIELDPQNPRVWANKGNALSKLNSYEEAITAYNESIELDPQNSVA 290
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W L G+ +A+ + +AI +P++ + +G+ E+A ++ ++ +
Sbjct: 291 WNGLGFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIE 350
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ P N A + G ++ ++ ++ P
Sbjct: 351 VNPQNAVAWYDKGSILKNLGNYEEAVEAFDKATELDP 387
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 68/157 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+++AI+ + + + P E + GLA GN++ A L P++ +W
Sbjct: 200 GNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWAN 259
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ +A+ ++I +P++ L G+YE+A + Y + ++ P
Sbjct: 260 KGNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDP 319
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
N +A G +I L++ ++V+P +A
Sbjct: 320 QNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNA 356
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 14/167 (8%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y GN+E+++ + + L P + + G + +L N++ A Y A L P++S
Sbjct: 606 YYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEAIKAYDKAIELKPQNSLA 665
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG-------DYEKAAE 157
W KG Y +A+++ K I L ++ + G DYE A
Sbjct: 666 WN-------NKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALN 718
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+Y + ++ P DA G+ ++ + L++ P ++
Sbjct: 719 AYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNS 765
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 69/157 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+E+AI + + + P E + G A +GN + A A ++P+++ W
Sbjct: 302 GNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYD 361
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G+ +A+ +A +PK S + + +G+Y++A ++Y++ ++ P
Sbjct: 362 KGSILKNLGNYEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDP 421
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ G SI ++ ++++ S +
Sbjct: 422 QDPGPWNNKGIALSNLGSYEESIKAFDKAIEINLSSS 458
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +E I+ + + L P + + G A S+LG+++ A Y A + P+D
Sbjct: 503 YNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDKALEIEPQDPLT 562
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH---LASFYVEIGDYEKAAESYEQ 161
W + +A+ + I ++ +D + + LA +Y G+YE++ ++Y++
Sbjct: 563 WNNREIAFGHLNNYEEALRAHNREIVSDSEDPEVSWNDKGLALYYS--GNYEESVKAYDK 620
Query: 162 IQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+L P+ DA F +I ++ +++ P ++
Sbjct: 621 AIELDPEYADAWFNKGNSFFSLKNYEEAIKAYDKAIELKPQNS 663
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y GN E+AI L + + ++P + G LGN++ A + + A L PK S+
Sbjct: 333 YNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFDKATELDPKKSSA 392
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ-IQ 163
W G+ +A+ +AI +P+D + +G YE++ +++++ I+
Sbjct: 393 WNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSYEESIKAFDKAIE 452
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+V G L + G +I ++ +++ P ++
Sbjct: 453 INLSSSVTWANKGLVLSI-LGNYEGAIKAFDKSIEIDPRNS 492
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+E+AI + + L P +N GLA + + A Y A L+ +DSA W
Sbjct: 644 NYEEAIKAYDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNN- 702
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE-------IGDYEKAAESYEQ 161
KG+T ++Y A+ A K + + + + +G YE+A ++ +
Sbjct: 703 ------KGNTLSSLYDYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNK 756
Query: 162 IQKLFPDNVDATKTGAQLFLKC--GQTARSIGILEEYLK 198
++ P N F C G S+G EE +K
Sbjct: 757 TLEIDPHNS---------FAWCNKGIALSSLGNYEEAMK 786
>gi|322709465|gb|EFZ01041.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Metarhizium anisopliae ARSEF 23]
Length = 689
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 239 GKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKN------AIDHADLITEVADTLMSL 292
G+ LPL L+V+ LR G+ +A L + A D LI ++ L
Sbjct: 323 GQSLPLDLRVRLATYRLRNGDYSEAMKHLDHLDPDDPSTTAFADDFTFLIYDLGVELGKN 382
Query: 293 GHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARL 352
++ A++Y+ L + G + + L+L CYL E A A + ALD EDNIDAR+
Sbjct: 383 SQASRAIRYFELLRSMPGDPDAAVLLQLGRCYLDTGESAMAEEYLLAALDADEDNIDARI 442
Query: 353 TLASLLLEEAKEE 365
LA+ + E+A+E+
Sbjct: 443 ELAN-MYEKARED 454
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 20 RGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS 79
RG RK +K + +T L + + + G++EQA+ L EV+R++ + + L
Sbjct: 61 RGPRKAAKPR--GDITARLSKVNQAFLSGDYEQAMDLAFEVIRINAETHQAWTALASIFR 118
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV--------QKGDTAQAMYYIRQAIRA 131
G A V AAHL PKD + W + +FA+ + G+ A A+RA
Sbjct: 119 ERGEIDRALSAMVYAAHLRPKDVSGWLRCASFALDSITGEDDEPGNLHTARLCYSAALRA 178
Query: 132 EPKDISLRIHLASF 145
+P +I R+ A +
Sbjct: 179 DPTNIEARLSKADY 192
>gi|116753411|ref|YP_842529.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
gi|116664862|gb|ABK13889.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila
PT]
Length = 366
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 34/192 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI + + + P+ + LG + +G H A + + A LSP DSA W +
Sbjct: 135 GRYEEAIEAYRMALDIDPSQARDWCILGESLQTIGRHSEALECFERALELSPSDSACWIR 194
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEP--------KDISLRI------------------- 140
+ G +A+ +A+R +P K I+ R
Sbjct: 195 MGESMHSTGRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSKAIDAIDSALTLDP 254
Query: 141 -HLASFYVE------IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
H S+Y + +G YE A E ++++ ++ P N A K+ A G+ A ++
Sbjct: 255 EHAQSWYAKGITFRAMGLYEDALECFDRVLRIDPGNASALKSRAWSLYNLGRYAEALSAC 314
Query: 194 EEYLKVHPSDAD 205
E + V+P D D
Sbjct: 315 EGAISVNPLDED 326
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A++ ++ + P+ E++ GLA ++G ++ A + Y +A + P + W L
Sbjct: 106 ALAWIERCIDSRPDDAESWRQKGLALLSMGRYEEAIEAYRMALDIDPSQARDWCILGESL 165
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
G ++A+ +A+ P D + I + G Y++A E YE+ +L P +V A
Sbjct: 166 QTIGRHSEALECFERALELSPSDSACWIRMGESMHSTGRYDEALECYEEALRLDPGSVQA 225
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ G +++I ++ L + P A
Sbjct: 226 WHGKGITYRAMGIPSKAIDAIDSALTLDPEHA 257
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+ +L +A +Y G++++AI V+ + P + G+A ++ A + Y
Sbjct: 4 IAALLQKAEEKYLDGSYDEAIEYYDRVLDIDPMNTAAWCGRGMACFCFSRYEDALECYSR 63
Query: 94 AAHLSPKDSALW--KQLLTFAVQKGDTAQAMY-------------YIRQAIRAEPKDISL 138
A P+ W + + F + + D A + Y +I + I + P D
Sbjct: 64 AIEADPECVPAWECRAEVLFILGRCDEAISSYQEAIDRDPAYALAWIERCIDSRPDDAES 123
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
+ +G YE+A E+Y + P + G+ + ++ E L+
Sbjct: 124 WRQKGLALLSMGRYEEAIEAYRMALDIDPSQARDWCILGESLQTIGRHSEALECFERALE 183
Query: 199 VHPSDA 204
+ PSD+
Sbjct: 184 LSPSDS 189
>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
Length = 125
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%)
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
N E + LG A+ G++ A ++Y A L P ++ W L ++GD +A+ Y
Sbjct: 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYY 66
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKT 175
++A+ P + +L + Y + GDY++A E Y++ +L+P+N +A +
Sbjct: 67 QKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQN 116
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 97 LSPKDSA-LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ P +SA W L ++GD +A+ Y ++A+ P + +L + Y + GDY++A
Sbjct: 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEA 62
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E Y++ +L+P+N +A + K G +I ++ L+++P++A+
Sbjct: 63 IEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAE 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI ++ + L PN E + LG A+ G++ A ++Y A L P ++ W
Sbjct: 23 GDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYN 82
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
L ++GD +A+ Y ++A+ P + + +L +
Sbjct: 83 LGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNLGN 119
>gi|291567441|dbj|BAI89713.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 715
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 139/330 (42%), Gaps = 23/330 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G F+QA + K+ + + P+ E Y LG + +SA FY A + P ++
Sbjct: 57 GEFDQAEASYKKALEIEPDFAEVYANLGSLFAQQNEWQSAISFYEKAIEIKPDFGGAYRN 116
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR--IHLASFYVEIGDYEKAAESYEQIQKL 165
L Q +A Y + +AI EP++I L I +A G + +A Y + ++
Sbjct: 117 LAKVFGQINQPNKANYCLLKAIDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYTKAMEI 176
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-SVIDLLVAILMENNAYEK 224
+P+ + + F+ C Q +I ++ L+++P DL V L + E Y++
Sbjct: 177 YPNVAEIHYNLGETFVNCQQWKSAITAYKQALEMNP---DLYYVYSRLGDVFTEQQNYQE 233
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EKAEILFADLQWKNAIDHADLI 282
+ + + +KLK + +LG + ++ +I A ++ I +
Sbjct: 234 AI-----------AAYQQCVKLKPDIDWIHFKLGEICKKQGDIKQAIAAYQKGITLQPQL 282
Query: 283 T----EVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
T ++ + L L Y L N + +Y KLAE + + AI +
Sbjct: 283 TWPYLKLLELLNQLESWQEIFSNYQELLNNHPDKSAIIYQKLAEVAVRFNKWNQAIKNYQ 342
Query: 339 KALDRFEDNIDARLTLASLLLEEAKEEEAI 368
KA++ + DA L LA + L + + +AI
Sbjct: 343 KAIEIDLECFDACLQLAQIFLRQGQPLKAI 372
>gi|27376419|ref|NP_767948.1| hypothetical protein blr1308 [Bradyrhizobium japonicum USDA 110]
gi|27349559|dbj|BAC46573.1| blr1308 [Bradyrhizobium japonicum USDA 110]
Length = 458
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 2/176 (1%)
Query: 29 KLSPGVTKMLGEASLQYAYG-NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL PG + + + Y G + E+AI L E +RL PN P TY G A+ LG +
Sbjct: 166 KLKPGDAQAWSDRGVTYYLGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQLDKS 225
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
A L PK + GD +A+ QA+R PK + + Y
Sbjct: 226 VADAAEAIRLDPKVPEYYDNRGLSLAAMGDYDKAIADYDQALRLAPK-PNFFTNRGDSYQ 284
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
G++ A YE KL P+ A L+ K G+ +++ E LK+ P +
Sbjct: 285 FKGEFGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLDPGN 340
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++++ E +RL P +PE Y+ GL+ +A+G++ A Y A L+PK + +
Sbjct: 220 GQLDKSVADAAEAIRLDPKVPEYYDNRGLSLAAMGDYDKAIADYDQALRLAPKPNFFTNR 279
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ KG+ A+ A++ +P + A Y ++G+ KA YE KL P
Sbjct: 280 GDSYQF-KGEFGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLDP 338
Query: 168 DNVDA 172
N +A
Sbjct: 339 GNDNA 343
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L+ A G+ +A + L + + L P E+Y G+ +++ A Y A L P D+
Sbjct: 113 LREAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTSQRRLDRALADYDQAIKLKPGDA 172
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
W GD +A+ + +A+R +P + + Y ++G +K+ +
Sbjct: 173 QAWSDRGVTYYLGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQLDKSVADAAEA 232
Query: 163 QKLFP 167
+L P
Sbjct: 233 IRLDP 237
>gi|359409222|ref|ZP_09201690.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675975|gb|EHI48328.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 727
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + S EV++ P+ ET+N LG LGN A + A L+P D+ + K
Sbjct: 32 GRLTELFSSTLEVLKRYPSCFETWNFLGDVSLTLGNSTDALSAFKTALKLNPSDARVNKN 91
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ +A+ + + A PKD ++ + ++GD A +Y+ L P
Sbjct: 92 LAITEYMLGNNEKALNFFKIASSLSPKDPDNHFNIGNILRDLGDINGAISAYKHCIALNP 151
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ +A L G+ ++I E+ +++ PSD +
Sbjct: 152 KDSEAYNNLGTALLSDGEINKAIIAYEKAIQLVPSDPN 189
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 29 KLSPG---VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
KL+P V K L A +Y GN E+A++ K LSP P+ + +G LG+
Sbjct: 80 KLNPSDARVNKNL--AITEYMLGNNEKALNFFKIASSLSPKDPDNHFNIGNILRDLGDIN 137
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A Y L+PKDS + L T + G+ +A+ +AI+ P D + +L
Sbjct: 138 GAISAYKHCIALNPKDSEAYNNLGTALLSDGEINKAIIAYEKAIQLVPSDPNAHNNLGLC 197
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ +++A E Y + +L P ++++ ++L+ R+I + +++ P+
Sbjct: 198 FHYQKRFKEAEEKYNEALRLNPKSINSLFNLGNVYLEKKNFLRAIQYFGQTIQIDPN 254
>gi|443321357|ref|ZP_21050412.1| Tfp pilus assembly protein PilF [Gloeocapsa sp. PCC 73106]
gi|442788931|gb|ELR98609.1| Tfp pilus assembly protein PilF [Gloeocapsa sp. PCC 73106]
Length = 358
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ +AI++ ++ +L P ++ LG ++ GN +A Y A L P +++ +
Sbjct: 46 GNYARAIAIYQQAAQLDQENPRIFSGLGYLYTTQGNFGAATRAYQRAIILDPDNASFYYA 105
Query: 108 LLTFAVQKGD--TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L Q GD TA YY +A+ +P +I + L + DYE A +Y++I L
Sbjct: 106 LGYNLAQIGDNQTAAKAYY--RAVNLDPLEIKYHLALGVVLLREKDYESALVTYQRIIAL 163
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGIL 193
P+N+ A + L + G+T ++ L
Sbjct: 164 DPENIQAQEILLSLLISQGRTQEAVEFL 191
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 2/185 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GNF A + + L P+ Y LG + +G++++A Y A +L P +
Sbjct: 80 GNFGAATRAYQRAIILDPDNASFYYALGYNLAQIGDNQTAAKAYYRAVNLDPLEIKYHLA 139
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +++ D A+ ++ I +P++I + L S + G ++A E
Sbjct: 140 LGVVLLREKDYESALVTYQRIIALDPENIQAQEILLSLLISQGRTQEAVEFLGTNATYLA 199
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
DN++ A+ L Q + L +P+D + V + ENN E LQ
Sbjct: 200 DNLELQLELARTLLNQKQFKVGLETLAAIESQYPNDPEFQVK--IAETWQENNYLEAALQ 257
Query: 228 HIEHA 232
+ A
Sbjct: 258 AYQRA 262
>gi|409992947|ref|ZP_11276110.1| sulfotransferase [Arthrospira platensis str. Paraca]
gi|409936193|gb|EKN77694.1| sulfotransferase [Arthrospira platensis str. Paraca]
Length = 715
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 139/330 (42%), Gaps = 23/330 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G F+QA + K+ + + P+ E Y LG + +SA FY A + P ++
Sbjct: 57 GEFDQAEASYKKALEIEPDFAEVYANLGSLFAQQNEWQSAISFYEKAIEIKPDFGGAYRN 116
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR--IHLASFYVEIGDYEKAAESYEQIQKL 165
L Q +A Y + +AI EP++I L I +A G + +A Y + ++
Sbjct: 117 LAKVFGQINQPNKANYCLLKAIDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYTKAMEI 176
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-SVIDLLVAILMENNAYEK 224
+P+ + + F+ C Q +I ++ L+++P DL V L + E Y++
Sbjct: 177 YPNVAEIHYNLGETFVNCQQWKSAITAYKQALEMNP---DLYYVYSRLGDVFTEQQNYQE 233
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EKAEILFADLQWKNAIDHADLI 282
+ + + +KLK + +LG + ++ +I A ++ I +
Sbjct: 234 AI-----------AAYQQCVKLKPDIDWIHFKLGEICKKQGDIKQAIAAYQKGITLQPQL 282
Query: 283 T----EVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFY 338
T ++ + L L Y L N + +Y KLAE + + AI +
Sbjct: 283 TWPYLKLLELLNQLESWQEIFSNYQELLNNHPDKSAIIYQKLAEVAVRFNKWNQAIKNYQ 342
Query: 339 KALDRFEDNIDARLTLASLLLEEAKEEEAI 368
KA++ + DA L LA + L + + +AI
Sbjct: 343 KAIEIDLECFDACLQLAQIFLRQGQPLKAI 372
>gi|150021662|ref|YP_001307016.1| TPR repeat-containing protein [Thermosipho melanesiensis BI429]
gi|149794183|gb|ABR31631.1| Tetratricopeptide TPR_2 repeat protein [Thermosipho melanesiensis
BI429]
Length = 352
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 7/240 (2%)
Query: 33 GVTKMLGEASLQYAYGNF-EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
G L E +++YA + A ++L+ +++ + Y LG GN + F
Sbjct: 90 GTVDGLYELAIEYADKDLLGDAKNILEFAIKIDRSFAPAYEFLGTILIEQGNSEEGIKFL 149
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A + P + L KG+ +A+ Y + I P DI +A Y +
Sbjct: 150 NRAIEVDPWLVQAYSTLGEVYYNKGEYEKAINYWLKEIEYSPNDIFTYFMIADAYTRSKN 209
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
YEKA E ++ ++ DNV A +Q++ + G+ + + +E L PSD + I++
Sbjct: 210 YEKAIEILNKLIEIDSDNVIAMYELSQIYREIGRNEEADIVEKEILNSKPSDPN--GIEI 267
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
I M+ Y++ ++ +E F L LK + Y++LG +EKA+ + +L+
Sbjct: 268 WAKIKMKYGKYDEIVKVMEPIIDDSFES----LHLKALLIVPYIKLGKIEKAKKYYEELK 323
>gi|296327363|ref|ZP_06869913.1| O-linked glcnac transferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155519|gb|EFG96286.1| O-linked glcnac transferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 800
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 152/368 (41%), Gaps = 34/368 (9%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
YGN+ +A LLK ++ S N Y+ LG + G + A + Y A L+ D+ ++
Sbjct: 160 YGNYTEAEMLLKNIINKSKNDEWLYSELGYCLAEQGKQEEALESYFKAIELNRNDAWIFT 219
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
++ +A+ Y +A+ + DI + +A Y +G++EKA + E++++L
Sbjct: 220 RIGMCYKNMDRKEEAIEYYLKALEQKEDDIFIMSDIAWLYDSLGEFEKALKYLERLEELG 279
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-NAYEKT 225
++ + K + +I + L+ D D + I + + Y++
Sbjct: 280 QNDAWTSTEYGYCLAKLKRFDEAIVKINRALEAEDEDKDTAYIYSQLGWCQRHLEKYDEA 339
Query: 226 LQHIEHAQIVRFSGKELPLKL---------KVKAGICYLRLGNMEKAEI-LFADLQW--- 272
++ A+ + + ++L K KA YL+ +K +I L +D+ W
Sbjct: 340 IETFLKAKKWARNDAWINIELGHCYKAKNEKEKALEFYLKAEKFDKNDISLLSDIAWHYD 399
Query: 273 ------------KNAI----DHADLITEVADTLMSLGHSNSALKYYHFLET--NAGTDNG 314
K + D A + E L LG A+K Y + + G D
Sbjct: 400 ALDRNEEALKYIKRVVRLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALSLDEEGKDER 459
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKA--LDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
Y+ +L CY L+E AI F KA L R + I+ + + LEE ++ L++
Sbjct: 460 YINSQLGWCYRQLEEYKKAIKFHKKAKELGRNDIWINMEIGMCYAKLEEYEKAAENYLIA 519
Query: 373 PPKDLDSL 380
D D +
Sbjct: 520 YEMDRDDI 527
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 254 YLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALK-YYHFLETNAGTD 312
Y R GN +AE+L ++ K+ D L +E+ L G AL+ Y+ +E N +
Sbjct: 157 YDRYGNYTEAEMLLKNIINKSKNDEW-LYSELGYCLAEQGKQEEALESYFKAIELN--RN 213
Query: 313 NGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNI 348
+ +++ ++ CY ++ + AI ++ KAL++ ED+I
Sbjct: 214 DAWIFTRIGMCYKNMDRKEEAIEYYLKALEQKEDDI 249
>gi|260435220|ref|ZP_05789190.1| tetratricopeptide repeat domain protein [Synechococcus sp. WH 8109]
gi|260413094|gb|EEX06390.1| tetratricopeptide repeat domain protein [Synechococcus sp. WH 8109]
Length = 857
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 132/312 (42%), Gaps = 19/312 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+FEQAI L E +L P P LG + LG A +F + + +L +S
Sbjct: 108 GDFEQAICLTLESYKLKPLDPLILMNLGGIYQDLGRLDQALEFTLKSLNLKQDNSIALGN 167
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + Q G +A+ +++ EPK+ + ++L Y + ++A E Q ++ P
Sbjct: 168 LGSIFKQLGRFDEALSSTLKSLELEPKNHNTLLNLGVIYTGLDKLDQALECTIQSLEIKP 227
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
DN DA A ++ K G R++ + +Y ++ P++ +A+L Y L
Sbjct: 228 DNPDALMNLAVIYRKIGSPDRALPPILKYSELKPNNH--------LALLTLAGIY-IDLG 278
Query: 228 HIEHAQIVRFSGKELPLKLKVKA---GICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
++ A I +L K G Y LG +++A I F + D+++
Sbjct: 279 ELDDALIYALKSFDLNPKNHTTCLVLGNIYRDLGRLDQA-IFFTHKSLELNSDNSNAHMN 337
Query: 285 VADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALD- 342
+A ++G + AL L+ N N Y L Y LK+ AI + KA +
Sbjct: 338 LALIYKTIGSFDKALASILSSLDINPSNSNA--YASLGNIYSYLKDYDKAIHAYKKAFEY 395
Query: 343 --RFEDNIDARL 352
E+ ARL
Sbjct: 396 NPSIENECRARL 407
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 157/383 (40%), Gaps = 55/383 (14%)
Query: 11 KKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
K + K +K R+ L PG+ LG + G +AI L K+ + +SP P+
Sbjct: 39 KGSLKSAEKEYRKAIKLGLLEPGIYSNLG--LICKNSGRINEAILLFKKAISISPEHPDA 96
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y LGL + LG+ + A + + L P D + L G QA+ + +++
Sbjct: 97 YANLGLIYKNLGDFEQAICLTLESYKLKPLDPLILMNLGGIYQDLGRLDQALEFTLKSLN 156
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+ + +L S + ++G +++A S + +L P N
Sbjct: 157 LKQDNSIALGNLGSIFKQLGRFDEALSSTLKSLELEPKN--------------------- 195
Query: 191 GILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKA 250
H + +L VI + + A E T+Q +E ++ + + L V
Sbjct: 196 ---------HNTLLNLGVI--YTGLDKLDQALECTIQSLE----IKPDNPDALMNLAV-- 238
Query: 251 GICYLRLGNMEKA--EIL-FADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLET 307
Y ++G+ ++A IL +++L+ N H L+T +A + LG + AL Y
Sbjct: 239 --IYRKIGSPDRALPPILKYSELKPNN---HLALLT-LAGIYIDLGELDDAL-IYALKSF 291
Query: 308 NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEA 367
+ N L L Y L AI F +K+L+ DN +A + LA + ++A
Sbjct: 292 DLNPKNHTTCLVLGNIYRDLGRLDQAIFFTHKSLELNSDNSNAHMNLALIYKTIGSFDKA 351
Query: 368 ITLLSPPKDLDSLDMNSDKSNPW 390
+ + L SLD+N SN +
Sbjct: 352 LASI-----LSSLDINPSNSNAY 369
>gi|222054003|ref|YP_002536365.1| hypothetical protein Geob_0902 [Geobacter daltonii FRC-32]
gi|221563292|gb|ACM19264.1| Tetratricopeptide TPR_2 repeat protein [Geobacter daltonii FRC-32]
Length = 627
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 36/211 (17%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL----- 104
FE+AI+ K ++ P+ PE LG A A+ N A +Y A L D +
Sbjct: 286 FEKAIAEYKAALKEKPDWPEALQKLGDACMAVNNDDDAITYYKEAVRLKAGDDIIHYKLG 345
Query: 105 ---------------WKQLLTFA--------------VQKGDTAQAMYYIRQAIRAEPKD 135
++Q L+ A Q+G QA+ ++ + D
Sbjct: 346 VLYERQALLDEAVVEYRQYLSTAADNLDARRRLADIYTQRGSYPQAIEQYHALLKLKNDD 405
Query: 136 ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+ + LA YV DY A Y KL PDN++A + AQL+ K Q + +
Sbjct: 406 AATHLKLARVYVSSKDYTTAISEYLATTKLEPDNIEAHRELAQLYRKKNQNEEAAKEYQA 465
Query: 196 YLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
LKV D D L +I ++N Y++ +
Sbjct: 466 VLKVKKDDNDARTA--LTSIYVKNKKYDELI 494
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 135/335 (40%), Gaps = 42/335 (12%)
Query: 72 NTLGLAHSALGN-------HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYY 124
++ G+ H ALG + A Y A P D+ L + ++ G A
Sbjct: 128 DSSGVYHKALGKIFSDKKLNSLALYHYNEALSQMPTDTNLHADIADVYLKSGLPNSAEEE 187
Query: 125 IRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCG 184
+ ++P ++ RI +A+ +++KA + ++ Q P N + + A+ + K G
Sbjct: 188 FNKVFASDPGNVRARIGVAAISFGRNEFDKAIDELKKAQSADPGNKEIHRLLAEAYEKKG 247
Query: 185 --------------QTARSIGILEEYLKVHPSDADLSVIDLLVAI------LMENNAYEK 224
Q L +YL+ D+ ++ + AI L E + +
Sbjct: 248 DRKSAEYESLLAGVQVKSETASLPDYLR--QGDSFMATKEFEKAIAEYKAALKEKPDWPE 305
Query: 225 TLQHIEHAQIVRFSGKEL------PLKLKVKAGICYLRLGNMEKAEILF--ADLQWK--- 273
LQ + A + + + ++LK I + +LG + + + L A ++++
Sbjct: 306 ALQKLGDACMAVNNDDDAITYYKEAVRLKAGDDIIHYKLGVLYERQALLDEAVVEYRQYL 365
Query: 274 -NAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAH 332
A D+ D +AD G A++ YH L D+ +LKLA Y+S K+
Sbjct: 366 STAADNLDARRRLADIYTQRGSYPQAIEQYHAL-LKLKNDDAATHLKLARVYVSSKDYTT 424
Query: 333 AIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEA 367
AI + DNI+A LA L ++ + EEA
Sbjct: 425 AISEYLATTKLEPDNIEAHRELAQLYRKKNQNEEA 459
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 139/355 (39%), Gaps = 42/355 (11%)
Query: 32 PG-VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
PG V +G A++ + F++AI LK+ P E + L A+ G+ KSA
Sbjct: 196 PGNVRARIGVAAISFGRNEFDKAIDELKKAQSADPGNKEIHRLLAEAYEKKGDRKSA--- 252
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
++ LL K +TA Y+RQ ++
Sbjct: 253 -------------EYESLLAGVQVKSETASLPDYLRQG---------------DSFMATK 284
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
++EKA Y+ K PD +A + + +I +E +++ D +I
Sbjct: 285 EFEKAIAEYKAALKEKPDWPEALQKLGDACMAVNNDDDAITYYKEAVRLKAGD---DIIH 341
Query: 211 LLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA-EILFAD 269
+ +L E A +E+ Q + + L + ++ Y + G+ +A E A
Sbjct: 342 YKLGVLYERQALLDEAV-VEYRQYLSTAADNLDARRRL--ADIYTQRGSYPQAIEQYHAL 398
Query: 270 LQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKE 329
L+ KN D A ++A +S +A+ Y T DN + +LA+ Y +
Sbjct: 399 LKLKN--DDAATHLKLARVYVSSKDYTTAISEY-LATTKLEPDNIEAHRELAQLYRKKNQ 455
Query: 330 RAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNS 384
A + L +D+ DAR L S+ ++ K +E I LL + + D NS
Sbjct: 456 NEEAAKEYQAVLKVKKDDNDARTALTSIYVKNKKYDELIGLLKEGVEQNPKDPNS 510
>gi|37523111|ref|NP_926488.1| hypothetical protein gll3542 [Gloeobacter violaceus PCC 7421]
gi|35214114|dbj|BAC91483.1| gll3542 [Gloeobacter violaceus PCC 7421]
Length = 436
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+ L A +++ G+ E A + E +RL P+ Y++ G H +G ++A D Y +
Sbjct: 79 ASAYLARAGVRHDLGDLEGAAADYTEAIRLEPDNRFAYDSRGDLHVEVGKLEAAADDYTV 138
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
HL PKD++ ++ GD A A+ Q IR +P D + + A Y + G +
Sbjct: 139 LIHLDPKDASAYENRAGVRRSLGDIAGAIADYTQMIRLDPSDPAGYQNRAKLYRQSGKVQ 198
Query: 154 KAAESYEQIQKLFPDNVDA 172
A Y ++ +L P ++ A
Sbjct: 199 LALADYAEVLRLEPSHLHA 217
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 61/159 (38%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+YA G+ A E +R P Y LG+ + A Y A L P +
Sbjct: 55 RYAAGDLRGAAEFYGEAIRRDPTRASAYLARAGVRHDLGDLEGAAADYTEAIRLEPDNRF 114
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ V+ G A I +PKD S + A +GD A Y Q+
Sbjct: 115 AYDSRGDLHVEVGKLEAAADDYTVLIHLDPKDASAYENRAGVRRSLGDIAGAIADYTQMI 174
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+L P + + A+L+ + G+ ++ E L++ PS
Sbjct: 175 RLDPSDPAGYQNRAKLYRQSGKVQLALADYAEVLRLEPS 213
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%)
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
A G+ + A +FY A P ++ + GD A +AIR EP +
Sbjct: 57 AAGDLRGAAEFYGEAIRRDPTRASAYLARAGVRHDLGDLEGAAADYTEAIRLEPDNRFAY 116
Query: 140 IHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
+VE+G E AA+ Y + L P + A + A + G A +I + +++
Sbjct: 117 DSRGDLHVEVGKLEAAADDYTVLIHLDPKDASAYENRAGVRRSLGDIAGAIADYTQMIRL 176
Query: 200 HPSD 203
PSD
Sbjct: 177 DPSD 180
>gi|427706673|ref|YP_007049050.1| hypothetical protein Nos7107_1250 [Nostoc sp. PCC 7107]
gi|427359178|gb|AFY41900.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 377
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A+ E +R++PN E Y LGL G ++A Y A + PK +A L
Sbjct: 120 AVQEYSEAIRINPNQSEVYYNLGLVLQRQGQKEAAVTAYRQALVIEPKMAAAQYNLGVVL 179
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
+ G +A+ +QA + ++S +LA E G E+A +Y Q+ +L P N+ A
Sbjct: 180 QELGQPQEAIAAYQQAANLDSGNVSTHFNLAIALQEQGKLEEAIAAYRQVIQLDPKNIVA 239
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A L + GQ +I + + ++ + DA
Sbjct: 240 YNNMAGLLVVQGQATEAITVYRQAIRQNSKDA 271
>gi|320161027|ref|YP_004174251.1| hypothetical protein ANT_16250 [Anaerolinea thermophila UNI-1]
gi|319994880|dbj|BAJ63651.1| hypothetical protein ANT_16250 [Anaerolinea thermophila UNI-1]
Length = 496
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN EQAI +++V+++ P Y LG + GN A+ +Y A L P +S +WK
Sbjct: 315 GNLEQAIEEMQQVLKIEPEQSIWYLELGRLTAKSGNLFEAYSYYEQATSLDPDNSLVWKS 374
Query: 108 LLTFAVQK--GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L F V + + ++ R+A++ P D + + GD+ A + + +L
Sbjct: 375 LAQFCVTYDFDVSGKGLFSAREALKLSPLDADAHKVMGDVLFKQGDFASAERFWVRTLQL 434
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILE 194
P + +A QL+L+ + + +LE
Sbjct: 435 NPSHAEAFLALGQLYLQENRLGEAQKMLE 463
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A L++ V + P E + LG A L + D A L+P+ S + + L
Sbjct: 250 YEEARLALQKAVEIQPVYAEAWAFLGEAKLELSDTTGKDDLKR-AISLNPR-SVISRVLY 307
Query: 110 T-FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + ++G+ QA+ ++Q ++ EP+ + L + G+ +A YEQ L PD
Sbjct: 308 SLYLSREGNLEQAIEEMQQVLKIEPEQSIWYLELGRLTAKSGNLFEAYSYYEQATSLDPD 367
Query: 169 NVDATKTGAQLFLKCGQTARSIGIL--EEYLKVHPSDAD 205
N K+ AQ + G+ E LK+ P DAD
Sbjct: 368 NSLVWKSLAQFCVTYDFDVSGKGLFSAREALKLSPLDAD 406
>gi|158522429|ref|YP_001530299.1| hypothetical protein Dole_2418 [Desulfococcus oleovorans Hxd3]
gi|158511255|gb|ABW68222.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 827
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 10/222 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E A++ ++ +++SPN E NTLG+ A + A + P +
Sbjct: 506 GDSEAAMAWCEKGLQISPNDLEIQNTLGVILLAQRREQEAAVLFEAVLQKDPGHTEALMN 565
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L A ++GD + + +AIR +P R HL G+ + A EQ L P
Sbjct: 566 LALIADKQGDREKTAALLEKAIRLDPASAEARYHLGELLARTGNPDNAMAQLEQALHLKP 625
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP--SDADLSVIDLLVAILMENNAYEKT 225
D+ A L+L+ G+T R+I ++ + + P + A ++ D LV +
Sbjct: 626 DHALAHNAMGNLWLQAGKTDRAIDHYQKAIAIDPGFAAAHTNLADALV----RTGKIDSA 681
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
L ++E R L L K GI + + GN+ AE L+
Sbjct: 682 LHYLETVAASRPDDAGLLL----KTGILHQQNGNLPAAENLY 719
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +QA+++ + + P YN LG G + A A P +
Sbjct: 438 GQTDQAMAMYNRAIEIDPGYIHPYNNLGALFLETGQPEKARPLLEKAIETDPLFMMAYSN 497
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + GD+ AM + + ++ P D+ ++ L + ++AA +E + + P
Sbjct: 498 LAIACHRLGDSEAAMAWCEKGLQISPNDLEIQNTLGVILLAQRREQEAAVLFEAVLQKDP 557
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ +A A + K G ++ +LE+ +++ P+ A+ L +L + +
Sbjct: 558 GHTEALMNLALIADKQGDREKTAALLEKAIRLDPASAEARY--HLGELLARTGNPDNAMA 615
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM----EKAEILFADLQWKNAID--HADL 281
+E A L LK + + +GN+ K + Q AID A
Sbjct: 616 QLEQA-----------LHLKPDHALAHNAMGNLWLQAGKTDRAIDHYQKAIAIDPGFAAA 664
Query: 282 ITEVADTLMSLGHSNSALKYYHFLETNAGT--DNGYLYLK 319
T +AD L+ G +SAL H+LET A + D+ L LK
Sbjct: 665 HTNLADALVRTGKIDSAL---HYLETVAASRPDDAGLLLK 701
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 6/196 (3%)
Query: 8 GYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNL 67
G R+KT L +K R + + + ++L GN + A++ L++ + L P+
Sbjct: 574 GDREKTAALLEKAIRLDPASAEARYHLGELLART------GNPDNAMAQLEQALHLKPDH 627
Query: 68 PETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQ 127
+N +G G A D Y A + P +A L V+ G A++Y+
Sbjct: 628 ALAHNAMGNLWLQAGKTDRAIDHYQKAIAIDPGFAAAHTNLADALVRTGKIDSALHYLET 687
Query: 128 AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
+ P D L + + + G+ A Y++ + P + + G+
Sbjct: 688 VAASRPDDAGLLLKTGILHQQNGNLPAAENLYQKALSIDPGCTACLNRLGMIHAQAGRLD 747
Query: 188 RSIGILEEYLKVHPSD 203
++ G EE + P +
Sbjct: 748 KAAGCFEELALLVPDN 763
>gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916]
gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916]
Length = 734
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI+ + ++L PN PE +N LG A+ G+ +A Y A L+P D
Sbjct: 113 GDLTAAIASYNKALQLRPNYPEAHNNLGNAYKDQGDLTAAIASYNSALQLNPNDPETHNN 172
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++GD A+ QA++ +P +L + E GD A SY + +L P
Sbjct: 173 LGVVLKKQGDPTAAITSYHQALQLQPNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLKP 232
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL 216
++ D + G +I + L++ P+ D L +L
Sbjct: 233 NDADTYNNLGNALKEQGDLTAAIDSFNKALQLKPNFPDAQWNSALTMLL 281
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+L G F + I LL+ + + PN PE + LGLA G+ +A Y A L P
Sbjct: 72 AALCGMQGRFSELIKLLRRTLEIKPNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRPN 131
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
L +GD A+ A++ P D +L + GD A SY
Sbjct: 132 YPEAHNNLGNAYKDQGDLTAAIASYNSALQLNPNDPETHNNLGVVLKKQGDPTAAITSYH 191
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Q +L P+ +A F + G +I + L++ P+DAD
Sbjct: 192 QALQLQPNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLKPNDAD 236
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI+ ++L+PN PET+N LG+ G+ +A Y A L P
Sbjct: 147 GDLTAAIASYNSALQLNPNDPETHNNLGVVLKKQGDPTAAITSYHQALQLQPNYPEAHYN 206
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++GD A+ +A++ +P D +L + E GD A +S+ + +L P
Sbjct: 207 LGIAFKEQGDLTAAIASYNKALQLKPNDADTYNNLGNALKEQGDLTAAIDSFNKALQLKP 266
Query: 168 DNVDATKTGAQLFLKCG 184
+ DA A L G
Sbjct: 267 NFPDAQWNSALTMLLGG 283
>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 125
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%)
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
N E + LG A+ G++ A ++Y A L P ++ W L ++GD +A+ Y
Sbjct: 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYY 66
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKT 175
++A+ +P + +L + Y + GDY++A E Y++ +L P+N +A +
Sbjct: 67 QKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQN 116
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI ++ + L PN E + LG A+ G++ A ++Y A L P ++ W
Sbjct: 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYN 82
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
L ++GD +A+ Y ++A+ +P + + +L +
Sbjct: 83 LGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 119
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 97 LSPKDSA-LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ P +SA W L ++GD +A+ Y ++A+ +P + +L + Y + GDY++A
Sbjct: 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEA 62
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E Y++ +L P+N +A + K G +I ++ L++ P++A+
Sbjct: 63 IEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE 112
>gi|434401253|ref|YP_007135081.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428272453|gb|AFZ38391.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 383
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 128/286 (44%), Gaps = 22/286 (7%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L + G +A++ + V+ L P+ ++ +G + GN +A + +
Sbjct: 60 VNRLLSQGKELVEQGKLAEALNAYQHVISLERENPQVFSAIGYLQAVRGNFPAAVNAFQK 119
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L ++ + L A+A Q I+ +P ++ + L + +Y+
Sbjct: 120 AIALESDNAYFYYGLAYSLASSQAHAEAANAYNQTIKLDPNLVNAHLGLGVVLLRQQNYD 179
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
A +++ ++ L PDN+ A +T +FL+ GQ ++I +L+ ++ SD+ + ++L +
Sbjct: 180 GALDAFLRVTTLAPDNLLAYRTMGTIFLQKGQFTKAIKVLQRAAELALSDSAIQ-LELGI 238
Query: 214 AILMENN------AYEKTLQHIEHAQIVRFS-GKELPLKLKVKAGICYLRLGNMEKAEIL 266
A L NN A+E+ + + F GK L L+ +A + R + +++
Sbjct: 239 AWLNLNNIPKAIAAFEQAAEFNPEDGKIHFQIGKILQLEGNTEAALAEYRKTASREPDLV 298
Query: 267 FADLQWKNAIDHADLITEVADTLMSLGHSNSAL--------KYYHF 304
A + AI AD++ E D LM++ A+ YYH
Sbjct: 299 AA----RKAI--ADILLEQQDYLMAIVEHRQAIALDPQDAQSYYHL 338
>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
18658]
gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
18658]
Length = 779
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 5/183 (2%)
Query: 29 KLSPGVTKMLGEASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
+L P +T L + YA+ ++++AI+ E +RL P+ Y G A S ++
Sbjct: 167 RLDPQLT--LAYHNRGYAWSQKNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYD 224
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
Y A L P D+ + QK D + + +AIR +P D S +
Sbjct: 225 KTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHA 284
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ + GD +KA Y + +L P N A + + G ++I +E +++ P+DA
Sbjct: 285 WSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDAS 344
Query: 206 LSV 208
V
Sbjct: 345 AYV 347
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI+ E +RL P L Y+ G A S ++ A Y A L P D++ +
Sbjct: 155 YDKAIADYNEAIRLDPQLTLAYHNRGYAWSQKNDYDKAITDYNEAIRLDPDDASAYFNRG 214
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+K D + + +AIR +P D + A + + DY+K Y + +L PD+
Sbjct: 215 YAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRLDPDD 274
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
A + + G ++I E +++ P++
Sbjct: 275 ASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTN 308
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++++ I+ E +RL P+ Y G A S G+ A Y L P ++ +
Sbjct: 256 DYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNR 315
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
QKGD +A+ +AIR +P D S ++ + E G+++KA + + +L P
Sbjct: 316 GYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPT 375
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
N A + + + + ++I E +++ P +A
Sbjct: 376 NTWAYLNRSHAWSEKEEYDKAIADANEIIRLDPQNA 411
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+ I+ E +RL+PN Y G A S + A Y A L P+ + +
Sbjct: 122 EEDIAEYDEAIRLNPNDASAYFNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGY 181
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
QK D +A+ +AIR +P D S + + + DY+K Y + +L PD+
Sbjct: 182 AWSQKNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDA 241
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A + + ++I E +++ P DA
Sbjct: 242 PTYFNRAHAWSQKEDYDKTIADYNEAIRLDPDDA 275
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++AI+ E +RL P Y G A + G+ A + A L P D++ +
Sbjct: 289 GDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVN 348
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+KG+ +A+ +AIR +P + ++ + + E +Y+KA +I +L P
Sbjct: 349 QGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKAIADANEIIRLDP 408
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
N A + K + ++I E +++ P++A
Sbjct: 409 QNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDPTNA 445
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI+ E +RL PN Y G A S H A Y A + PK + +
Sbjct: 563 YDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRA 622
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+K D +A+ +AIR +PKD S + + + DY KA Y + +L P
Sbjct: 623 ITWSRKKDYDKAITDFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLNPKL 682
Query: 170 VDATKTGAQLFLKC 183
A A ++ C
Sbjct: 683 ASAYNNRAWIWATC 696
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 9/240 (3%)
Query: 29 KLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSP-NLPETYNTLGLAHSALGNHKS 86
+L P T ++ N +++AI+ + +RL P N P +N G A S +
Sbjct: 507 QLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNR-GHAWSQKEGYDK 565
Query: 87 AFDFYVIAAHLSPKDSALW--KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
A Y A L P ++ + + Q+ D A A Y +AIR +PK + I+ A
Sbjct: 566 AIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADY--NEAIRIDPKAANAYIYRAI 623
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ DY+KA + + ++ P + + + K A++I E ++++P A
Sbjct: 624 TWSRKKDYDKAITDFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLNPKLA 683
Query: 205 DLSVIDLLVAILMENNAYEKTLQHIEHAQIV-RFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ Y + +E A + SG+E+ L A Y LG+ KA
Sbjct: 684 SAYNNRAWIWATCPGEQYRDGQKAVESAHLAWELSGEEITSYLSTLAA-AYAELGDFVKA 742
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 11/187 (5%)
Query: 45 YAYG---NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD 101
YA+G ++AI+ E +RL P Y G A H A + A L P +
Sbjct: 419 YAWGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTN 478
Query: 102 SALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ 161
+ + QK D +A+ +AI+ +P S ++ + + DY+KA + +
Sbjct: 479 TWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNK 538
Query: 162 IQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
+L P N A + + ++I E +++ P++A +A L +A
Sbjct: 539 AIRLDPINAPAYFNRGHAWSQKEGYDKAIADYNEAIRLDPNNA--------LAYLNRGHA 590
Query: 222 YEKTLQH 228
KT +H
Sbjct: 591 RSKTQEH 597
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-----DSA 103
++++AI+ E +R+ P +++ G A S ++ A Y A L+PK ++
Sbjct: 630 DYDKAITDFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLNPKLASAYNNR 689
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH-LASFYVEIGDYEKAAESYEQI 162
W Q D +A+ A ++I+ + LA+ Y E+GD+ KA E E++
Sbjct: 690 AWIWATCPGEQYRDGQKAVESAHLAWELSGEEITSYLSTLAAAYAELGDFVKAVEWQEKM 749
Query: 163 QKLFPD 168
KL D
Sbjct: 750 TKLLTD 755
>gi|255562045|ref|XP_002522031.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223538835|gb|EEF40435.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 979
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y +++ I +E +RL P E Y + A G+ A +Y+IA L P
Sbjct: 96 GAIYYQLHDYDMCIEKNEEALRLEPRFAECYGNMANAWKEKGDIDLAIRYYLIAIELRPN 155
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L + ++KG +A RQA+ P + +L + G ++A Y
Sbjct: 156 FADAWSNLASAYMRKGRLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYL 215
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILME 218
+ ++ P A A LFL+ G R++ +E +K+ P+ DA L++ ++ A+ M
Sbjct: 216 EALRIQPTFAIAWSNLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMP 275
Query: 219 NNA---YEKTLQ 227
A Y++ +Q
Sbjct: 276 QEAIVCYQRAVQ 287
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +A+ KE V+L P P+ Y LG + ALG + A Y A P + +
Sbjct: 239 GDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMPQEAIVCYQRAVQTRPNYAVAFGN 298
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++G A+++ +QAI + + + +L + ++G E+A + Y Q L P
Sbjct: 299 LASTYYERGQLDLAIHHYKQAIACDGRFLEAYNNLGNALKDVGRVEEAIQCYNQCLALQP 358
Query: 168 DNVDATKTGAQLFLK 182
+ A ++++
Sbjct: 359 SHPQALTNLGNIYME 373
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 65/138 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + L+P L + ++ LG A G + A+ Y+ A + P + W
Sbjct: 171 GRLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSN 230
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P ++L + Y +G ++A Y++ + P
Sbjct: 231 LAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMPQEAIVCYQRAVQTRP 290
Query: 168 DNVDATKTGAQLFLKCGQ 185
+ A A + + GQ
Sbjct: 291 NYAVAFGNLASTYYERGQ 308
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 62/154 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI + + L P+ P+ LG + +A +Y ++ SA +
Sbjct: 341 GRVEEAIQCYNQCLALQPSHPQALTNLGNIYMEWNMASTAASYYKATLAVTTGLSAPFNN 400
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + Y EIG A + Y + + P
Sbjct: 401 LAVIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITIRP 460
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+A A + G+ ++ + L + P
Sbjct: 461 TMAEAHANLASAYKDSGRVEAAVKSYRQALVLRP 494
>gi|317052270|ref|YP_004113386.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
indicum S5]
gi|316947354|gb|ADU66830.1| Tetratricopeptide TPR_1 repeat-containing protein
[Desulfurispirillum indicum S5]
Length = 1017
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F++AI + + P+LPE+Y+ LGLA + + A +++ A L P +S
Sbjct: 156 GDFKKAIESFQRAIAARPSLPESYSALGLALHEVSRNVEALQYHLQALRLDPDNSEFHNN 215
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + GD A A + +AI P + + S + GDY+ A + + +I P
Sbjct: 216 VGNAYLYLGDYANARRHYTRAIEINPSNTQAMANQNSLLLITGDYDAAIQGFREILSADP 275
Query: 168 DNVDA--------TKTGAQL-----FLKCGQTARSIGIL 193
DN + K G QL F + Q R+ +
Sbjct: 276 DNYEVLMNLGMAYRKNGNQLDALEFFRRAQQVQRTPNVF 314
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 70 TYNTLGLAHSALGNHKSAFDFY--VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQ 127
Y+ LG+ ++ LG+ K A + + IAA S +S L V + +A+ Y Q
Sbjct: 144 AYHNLGVIYTELGDFKKAIESFQRAIAARPSLPESYSALGLALHEVSR--NVEALQYHLQ 201
Query: 128 AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
A+R +P + ++ + Y+ +GDY A Y + ++ P N A L L G
Sbjct: 202 ALRLDPDNSEFHNNVGNAYLYLGDYANARRHYTRAIEINPSNTQAMANQNSLLLITGDYD 261
Query: 188 RSIGILEEYLKVHPSDADL 206
+I E L P + ++
Sbjct: 262 AAIQGFREILSADPDNYEV 280
>gi|392413167|ref|YP_006449774.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390626303|gb|AFM27510.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 546
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 42/262 (16%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+L +A++ G +++A+ +L++ + L P+ P Y L + GN+ A A
Sbjct: 279 LLNQATILMMMGRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYLGALKDLNKALQ 338
Query: 97 LSPKDSALW-KQLLTF-AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
+ P D L K+ F + +GD +A+ + I +P++ R+ S Y E+
Sbjct: 339 VQPDDVWLLIKRAHVFKMIARGD--KALADLDSVIELDPENHEARLMRGSLYFNDKQLER 396
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK--------------VH 200
A + + L P++ A + A+ FLK G T ++ ++ + LK +H
Sbjct: 397 AIQDLKIAIDLLPEDAAAYQLLAEAFLKKGDTPEALKMIGQALKKESSFPAAFVTLGEIH 456
Query: 201 PSDADLS----------VID--------LLVAILMENNAYEKTLQHIEHAQIVR-FSGKE 241
+D+ + ID + +E N Y+ +Q +EHA +SGK
Sbjct: 457 MADSHMDQALEAYSRALTIDPNSFEARMRRAELFIELNNYQNAVQDLEHAAKSNPYSGKV 516
Query: 242 LPLKLKVKAGICYLRLGNMEKA 263
L+ +CY LG+ EKA
Sbjct: 517 YQLR-----AMCYETLGDKEKA 533
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 45 YAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD 101
+AY G ++++ + + L P + E Y AH A+ A Y AA + P+D
Sbjct: 216 FAYLKSGQPQKSLEDFDKALELDPEMKEIYWYRADAHRAINALDKALKDYQKAASIDPED 275
Query: 102 SALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ 161
S L T + G +A+ +RQ+I EP + + A Y+ G+Y A + +
Sbjct: 276 SILLLNQATILMMMGRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYLGALKDLNK 335
Query: 162 IQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
++ PD+V A +F + +++ L+ +++ P +
Sbjct: 336 ALQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVIELDPEN 377
>gi|449449593|ref|XP_004142549.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Cucumis
sativus]
Length = 975
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 5/197 (2%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
+L ++ Y +F+ I+ +E +R+ P E Y + A GN A +Y+ A
Sbjct: 97 NLLLMGAIYYQLSDFDMCIAKNEEALRIEPRFAECYGNMANAWKEKGNIDLAIRYYLHAI 156
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P W L + ++KG +A RQA+ P + +L + G ++A
Sbjct: 157 ELRPNFCDAWSNLASAYMRKGRLGEAAQCCRQALALNPLLVDAHSNLGNLMKAQGMVQEA 216
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLV 213
Y + ++ P A A LF++ G R++ +E +K+ P DA L++ ++
Sbjct: 217 YSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPQFPDAYLNLGNVYK 276
Query: 214 AILMENNA---YEKTLQ 227
A+ M A Y++ +Q
Sbjct: 277 ALGMPQEAIVCYQRAIQ 293
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +A+ KE V+L P P+ Y LG + ALG + A Y A + P + +
Sbjct: 245 GDLNRALQYYKEAVKLKPQFPDAYLNLGNVYKALGMPQEAIVCYQRAIQMRPNYAIAYGN 304
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++ A+ + +QAI +P+ + +L + E G E+A + Y Q L P
Sbjct: 305 LASTYYEQSQLDMAILHYKQAITCDPRFLEAYNNLGNALKEFGRVEEAIQCYNQCLALQP 364
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
+ A ++++ + + L+V
Sbjct: 365 SHPQALTNLGNIYMEWNMVPAAASYYKATLRV 396
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 61/121 (50%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + L+P L + ++ LG A G + A+ Y+ A + P + W
Sbjct: 177 GRLGEAAQCCRQALALNPLLVDAHSNLGNLMKAQGMVQEAYSCYLEALRIQPTFAIAWSN 236
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P+ ++L + Y +G ++A Y++ ++ P
Sbjct: 237 LAGLFMESGDLNRALQYYKEAVKLKPQFPDAYLNLGNVYKALGMPQEAIVCYQRAIQMRP 296
Query: 168 D 168
+
Sbjct: 297 N 297
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 64/155 (41%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
+G E+AI + + L P+ P+ LG + +A +Y ++ SA +
Sbjct: 346 FGRVEEAIQCYNQCLALQPSHPQALTNLGNIYMEWNMVPAAASYYKATLRVTTGLSAPFN 405
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L Q+G+ A A+ + +R +P ++ + Y EIG +A + Y + +
Sbjct: 406 NLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSEAIQDYIRAINIR 465
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
P +A A + G +I ++ L + P
Sbjct: 466 PTMAEAHANLASAYKDSGLVEAAIKSYKQALHLRP 500
>gi|300871595|ref|YP_003786468.1| hypothetical protein BP951000_1989 [Brachyspira pilosicoli 95/1000]
gi|300689296|gb|ADK31967.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 747
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 163/389 (41%), Gaps = 36/389 (9%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ AI +E R+ N ++YN LG+++ A+GN+ A + + + PK + L
Sbjct: 55 FDDAIKYFEEAKRVDINTFKSYNLLGISYHAIGNYDKAIECFYETLKIIPKSYTAYNLLG 114
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+K + +A+ +AI PK +LA ++ +YE A +E + +
Sbjct: 115 ISYYKKNEHDKAIECFNKAIEINPKYDKAYNNLALYHYRSKNYEAAINFFENSKSMDEML 174
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
A + G ++I L YL+ + +S + L AI Y+K +++
Sbjct: 175 FKAYDMLGMCYYNIGNYDKAIECLNRYLQSNSRSYKIS--NTLGAIYSYLKNYDKAIEYF 232
Query: 230 EHAQIV--RFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
A + +++ L L + + N +KA + F D K +D ++A
Sbjct: 233 NKAIEINPKYANAYNNLAL------IFFKQKNFDKAALYF-DKARKFDLDSFIDYYKLAI 285
Query: 288 TLMSLGHSNSALKYY-HFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
+ S + A++Y+ +E N+ + Y ++ L CYLS +E +I +F KA++ +
Sbjct: 286 SYYSKKYYYEAIEYFKKVIERNSNSYKAYNFIGL--CYLSNEEYDKSIEYFKKAIEINDM 343
Query: 347 NIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD------------MNSDKSNPWWLNE 394
A LA+ L EAI D++ D +++ ++LN+
Sbjct: 344 YYKAYNNLANAYLNLKDYNEAIKYFKSSIDINDSDEAYYGIAICYYSKGEKETSAYYLNK 403
Query: 395 KIIMKLCHIYRAKGMPEDFVDAIFPLVCE 423
I + E+++D +F + +
Sbjct: 404 NI----------DNINENYIDMLFNIYID 422
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
MLG Y GN+++AI L ++ + + NTLG +S L N+ A +++ A
Sbjct: 180 MLGMC--YYNIGNYDKAIECLNRYLQSNSRSYKISNTLGAIYSYLKNYDKAIEYFNKAIE 237
Query: 97 LSPKDSALWKQL-LTFAVQKGDTAQAMYY 124
++PK + + L L F QK A+Y+
Sbjct: 238 INPKYANAYNNLALIFFKQKNFDKAALYF 266
>gi|428218502|ref|YP_007102967.1| hypothetical protein Pse7367_2276 [Pseudanabaena sp. PCC 7367]
gi|427990284|gb|AFY70539.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 418
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E AI + V PN+ + LGLA + G + A + + AA L P +
Sbjct: 175 GDVEGAIKAFRAAVSKKPNMTAAHYNLGLAFAQTGQLQEAINAFFRAAELDPTFPMTFSN 234
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +Q G+ QA+ Y ++AI +P +L Y E G +A S + QKL+P
Sbjct: 235 LGAALLQGGNPQQAVAYFQRAIELKPDLPIAHYNLGIAYKEQGQITEAIASLREAQKLYP 294
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ + L + G +I + + L+++P+
Sbjct: 295 QSPETNYNLGLLVQESGDLDEAIKLYQAALEINPN 329
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI+ L P P T++ LG A GN + A ++ A L P
Sbjct: 209 GQLQEAINAFFRAAELDPTFPMTFSNLGAALLQGGNPQQAVAYFQRAIELKPDLPIAHYN 268
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++G +A+ +R+A + P+ +L E GD ++A + Y+ ++ P
Sbjct: 269 LGIAYKEQGQITEAIASLREAQKLYPQSPETNYNLGLLVQESGDLDEAIKLYQAALEINP 328
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ A FL + ++I L++ ++ P+ AD
Sbjct: 329 NYAQARYNLGAAFLLQEKMDQAIAELQKATQLRPNYAD 366
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P LG A LQ GN +QA++ + + L P+LP + LG+A+ G A
Sbjct: 229 PMTFSNLGAALLQG--GNPQQAVAYFQRAIELKPDLPIAHYNLGIAYKEQGQITEAIASL 286
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A L P+ L + GD +A+ + A+ P R +L + ++
Sbjct: 287 REAQKLYPQSPETNYNLGLLVQESGDLDEAIKLYQAALEINPNYAQARYNLGAAFLLQEK 346
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
++A ++ +L P+ DA T K GQT +I
Sbjct: 347 MDQAIAELQKATQLRPNYADAFFTLGVARAKQGQTQAAI 385
>gi|124024110|ref|YP_001018417.1| hypothetical protein P9303_24191 [Prochlorococcus marinus str. MIT
9303]
gi|123964396|gb|ABM79152.1| Hypothetical protein P9303_24191 [Prochlorococcus marinus str. MIT
9303]
Length = 545
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E A+ + +E ++ + +PET+ A +G + A Y A L+P +
Sbjct: 82 GQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGN 141
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ +A +R+A+ + P+DI+ ++L E G++E+A SY + ++ P
Sbjct: 142 LGALLTDDGELDEAEKVLRRALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKP 201
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
D VDA +L G + +G ++E ++
Sbjct: 202 DFVDA-------YLNLGGVLKDVGRMDEVRQI 226
>gi|13472372|ref|NP_103939.1| hypothetical protein mll2645 [Mesorhizobium loti MAFF303099]
gi|14023118|dbj|BAB49725.1| mll2645 [Mesorhizobium loti MAFF303099]
Length = 592
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
G R G+ + G+ + + +A + G ++A S+ ++V+ P + LGL
Sbjct: 32 GTRSGAGGQPPLGLDQYVQQALQLHQAGRRQEAESIYRQVLARQPKHAAAAHFLGLLLHQ 91
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
G + D + L P ++ T G A A+ + R A+ P+ ++ R
Sbjct: 92 TGRSEEGLDLIERSVSLQPTNADFLNNFGTVMRDLGRVAAAIDFFRGAVDLRPEQLAARD 151
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
+L S ++G +E+A + Y P +V A A+ + G+ ++ + E L +
Sbjct: 152 NLGSSLKQLGRFEEAEDIYRGTVARNPFHVRARIGLAETLQEAGRLDEALAVFRESLTIR 211
Query: 201 PSDADL 206
P DADL
Sbjct: 212 PKDADL 217
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 63/160 (39%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L + G E+ + L++ V L P + N G LG +A DF+ A L P+
Sbjct: 88 LLHQTGRSEEGLDLIERSVSLQPTNADFLNNFGTVMRDLGRVAAAIDFFRGAVDLRPEQL 147
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
A L + Q G +A R + P + RI LA E G ++A + +
Sbjct: 148 AARDNLGSSLKQLGRFEEAEDIYRGTVARNPFHVRARIGLAETLQEAGRLDEALAVFRES 207
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ P + D ++ G+ + + + L V+P
Sbjct: 208 LTIRPKDADLLHGLGVGMMEKGKLDEAADLFRQALAVNPG 247
>gi|333987253|ref|YP_004519860.1| hypothetical protein MSWAN_1038 [Methanobacterium sp. SWAN-1]
gi|333825397|gb|AEG18059.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 329
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+++ + + L+P + +N + LG H+ + + ++P+D+ W
Sbjct: 125 GKYEESLKYYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTDTW-- 182
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRA-------EPKDISLRIHLASFYVEIGDYEKAAESYE 160
KG + Q M ++A+++ + D+S + + E+G Y KA E ++
Sbjct: 183 -----YNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINNKGVIFKELGKYNKALECFD 237
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
++ +L P+ ++ F + G+ S+ + LK++P+D
Sbjct: 238 KVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLNPND 280
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 67/158 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +++ L + + L PN E ++ G+A LG + + + L K + W
Sbjct: 23 GKYGESLECLDKALELDPNDREILHSKGVALKELGKFEESIKCFDKVLELDKKVYSAWNN 82
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G A+ +A+ PK + ++G YE++ + Y + +L P
Sbjct: 83 KGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLTKLGKYEESLKYYNKALELNP 142
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ A A +F K G+ + ++ L+++P D D
Sbjct: 143 KYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTD 180
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 74/189 (39%), Gaps = 34/189 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE++I +V+ L + +N G + LG + A Y A ++PK W
Sbjct: 57 GKFEESIKCFDKVLELDKKVYSAWNNKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNN 116
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD---------------- 151
+ G +++ Y +A+ PK + + A + ++G
Sbjct: 117 KGGLLTKLGKYEESLKYYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNP 176
Query: 152 ------------------YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
Y++A +SY+ + KL ++ A +F + G+ +++
Sbjct: 177 EDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINNKGVIFKELGKYNKALECF 236
Query: 194 EEYLKVHPS 202
++ L+++P+
Sbjct: 237 DKVLELNPN 245
>gi|302038431|ref|YP_003798753.1| hypothetical protein NIDE3134 [Candidatus Nitrospira defluvii]
gi|300606495|emb|CBK42828.1| protein of unknown function, TPR-like [Candidatus Nitrospira
defluvii]
Length = 456
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 140/344 (40%), Gaps = 20/344 (5%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A GN+EQA+ + ++ + PE + +GLA +A G A + Y +A + P+ +A+
Sbjct: 73 HAKGNYEQAVEKFRSALQKRTDFPEARHAMGLALAAQGALDEAINEYRVALNAQPEFAAI 132
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L +KG +A+ R AIR +P + + +LA D + A Y + +
Sbjct: 133 HNNLGVALSEKGQVDEAIAAYRHAIRLQPGNAAPHHNLALALEAKEDLDGAVGEYRESLR 192
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP-SDADLSVIDLLVAILMENNAYE 223
L PDN A + K G +IG L++ A L ++L A+L +
Sbjct: 193 LQPDNATAHNNLGLVLQKKGLLDEAIGEYRAALRLQAGGSAALYSVNLSAALLAKGE--- 249
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA--EILFADLQWKNAI----D 277
++ A ++L+ + G + LG KA E+ A ++ +
Sbjct: 250 -----VDGA----IGAGRTAIRLQPENGDAHYNLGLALKAKGEVEGALAAFREVLKLDPG 300
Query: 278 HADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFF 337
+ +V L G S+ A+ Y + T +G LA + AI+ +
Sbjct: 301 QGAVHYDVGQLLERAGESDGAIAEYRAMLAYRPT-HGPAQEALAVLLQKNGDVDGAIVAY 359
Query: 338 YKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
AL +I A L LL + + +EA+T DL D
Sbjct: 360 RAALQAAPKSIAAHNNLGVALLTKGRIDEALTAFRTAADLQPAD 403
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 121/300 (40%), Gaps = 27/300 (9%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA-LWKQ 107
+ + A+ +E +RL P+ +N LGL G A Y A L SA L+
Sbjct: 179 DLDGAVGEYRESLRLQPDNATAHNNLGLVLQKKGLLDEAIGEYRAALRLQAGGSAALYSV 238
Query: 108 LLTFAV-QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L+ A+ KG+ A+ R AIR +P++ +L G+ E A ++ ++ KL
Sbjct: 239 NLSAALLAKGEVDGAIGAGRTAIRLQPENGDAHYNLGLALKAKGEVEGALAAFREVLKLD 298
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
P QL + G++ +I L P+ + L +L +N + +
Sbjct: 299 PGQGAVHYDVGQLLERAGESDGAIAEYRAMLAYRPTHGPAQ--EALAVLLQKNGDVDGAI 356
Query: 227 QHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF---ADLQWKNAIDHADLIT 283
+ + ++ + K + + G+ L G +++A F ADLQ + I + +L
Sbjct: 357 --VAYRAALQAAPKSIAAHNNL--GVALLTKGRIDEALTAFRTAADLQPADPIAYYNL-- 410
Query: 284 EVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
+ + +A++ Y Y+KLAE +E+ A+ L+R
Sbjct: 411 --GEAFSAQQQRGAAIQSYRS------------YVKLAEAQPDHREKVEAVRKQLAELER 456
>gi|170578566|ref|XP_001894461.1| TPR Domain containing protein [Brugia malayi]
gi|158598938|gb|EDP36695.1| TPR Domain containing protein [Brugia malayi]
Length = 311
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L + L+P P + L + A G+ AF Y + P + + + L
Sbjct: 53 NTAQAIELYSQANSLAPTDPAILSKLANIYDAEGDKSQAFQCYYDSYRYFPSNISTIEWL 112
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A Y +A EP +I ++ +AS G+Y+KA E Y+QI K FP+
Sbjct: 113 GAYYIDAQYPEKAAIYFEKASIMEPNEIKWQLMMASCLRRSGNYQKAFELYQQIHKRFPE 172
Query: 169 NVDATK 174
N++ K
Sbjct: 173 NIECLK 178
>gi|83645408|ref|YP_433843.1| hypothetical protein HCH_02628 [Hahella chejuensis KCTC 2396]
gi|83633451|gb|ABC29418.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
Length = 197
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAIS--LLKEVVRLSPNLPETYNTLGLAH 78
R+ S +K G + A N + A++ L K+V+ P L Y LG+
Sbjct: 30 ARKDASADKSPAGEQTQMKYDQALTALNNNQVALAENLFKQVIADKPGLSAPYFNLGVIA 89
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
G+ SA +Y A ++PKD+ QL A ++GD A+ + +A++AEP +
Sbjct: 90 EKQGDLPSAKTWYGQALDVNPKDARALNQLAVLAREEGDFENALAFYERALQAEPNEPVY 149
Query: 139 RIHLASFY-VEIGDYEKAAESYEQIQKL 165
++A Y + +GDY +A E Y++ Q+L
Sbjct: 150 HRNIAILYDMYLGDYVRALEHYQRCQEL 177
>gi|51892857|ref|YP_075548.1| hypothetical protein STH1719 [Symbiobacterium thermophilum IAM
14863]
gi|51856546|dbj|BAD40704.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 422
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 9/237 (3%)
Query: 29 KLSPGVTKM-LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+++PG+ + + + A G E+A+ + + P +N GL + LG + A
Sbjct: 149 RVNPGLPDLWVTKGRTLLALGRPEEALVFIDGALAGRPRSGTLWNLRGLCLNELGRLQEA 208
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
D Y AA L D A+W L A+QK G TA+A+ + +A+R P D +L ++
Sbjct: 209 ADAYRRAARLLRTDGAVWANL-GLALQKTGQTAEALRALLRAVRLRPSDPTLLNNVGYTL 267
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ G +A ESY Q L PD+ A + G A + +L+ L+ P D L
Sbjct: 268 LRAGRTREAIESYRQASALEPDSPLTLGNLAAALFEGGMMAEATALLDAALQKAPGDPTL 327
Query: 207 SVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
++ +L++ Y + L E A + R + P L +A CY LG E+A
Sbjct: 328 --LNNKGHLLLKAGQYREALACFEEA-LKR--APDDPAALANQAA-CYFALGRYEQA 378
>gi|196234038|ref|ZP_03132873.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196221887|gb|EDY16422.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 733
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 13/220 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A +L ++++ + PN + LG+ +G ++A D A L P ++
Sbjct: 23 GRLAEAETLYRQILAVEPNHANALHFLGVVAHQVGQQETAIDLIRRAIALDPANAVAHSN 82
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G T +A+ R+A+ P D + +L + E ++A +YEQ + P
Sbjct: 83 LGYAYHAQGRTEEAIAEFRRALELNPGDALVYYNLGNALGECSRRDEAIAAYEQALRYRP 142
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ A A G+ R+I + ++ P DAD+++ L L+E + +
Sbjct: 143 NYPAACFNLANTLRNHGRLDRAIAAYRQAWRLVPGDADVAIN--LGNALVEQREFSEATA 200
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
+ HA L+L+ + I + LGN +A+ L
Sbjct: 201 VLRHA-----------LQLRPDSAIAHYNLGNALRAQGLL 229
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 10/163 (6%)
Query: 38 LGEASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
+ ++L YAY G E+AI+ + + L+P Y LG A A Y A
Sbjct: 78 VAHSNLGYAYHAQGRTEEAIAEFRRALELNPGDALVYYNLGNALGECSRRDEAIAAYEQA 137
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
P A L G +A+ RQA R P D + I+L + VE ++ +
Sbjct: 138 LRYRPNYPAACFNLANTLRNHGRLDRAIAAYRQAWRLVPGDADVAINLGNALVEQREFSE 197
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
A +L PD+ A G R+ G+L+E +
Sbjct: 198 ATAVLRHALQLRPDSAIA-------HYNLGNALRAQGLLDEAM 233
>gi|167534662|ref|XP_001749006.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772430|gb|EDQ86081.1| predicted protein [Monosiga brevicollis MX1]
Length = 762
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+F+Q+ + ++ L P G + L + AF ++ A P D A
Sbjct: 503 DFDQSCEWFETLIGLVRTDPNALRHFGELYDKLEDKSEAFKYHFEAFRYFPSDIATISWF 562
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
++ ++ +A+ Y +A +P + R+ + S Y G+Y++A E Y++ +LFPD
Sbjct: 563 GSYYIESQFIEKAIQYFERAAEVQPGQVKWRLMIGSCYRRTGNYQQALEVYKRTHRLFPD 622
Query: 169 NVDATK 174
NV+ K
Sbjct: 623 NVECLK 628
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+K +P M+ + + A +AI E + + E LGLAH LG+ A
Sbjct: 416 DKYNPNA--MVNKGNCLLAQDKHAEAIEFYHEALAVDSGCFEALYNLGLAHRRLGDLDEA 473
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
D ++ A + P + A+ +Y +A+ Y
Sbjct: 474 LDCFLKLADMLP-----------------EHAEVVY-----------------QVAAVYE 499
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
E+ D++++ E +E + L + +A + +L+ K + + E + PS D++
Sbjct: 500 ELEDFDQSCEWFETLIGLVRTDPNALRHFGELYDKLEDKSEAFKYHFEAFRYFPS--DIA 557
Query: 208 VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
I + +E+ EK +Q+ E A V+ G+ +K ++ G CY R GN ++A
Sbjct: 558 TISWFGSYYIESQFIEKAIQYFERAAEVQ-PGQ---VKWRLMIGSCYRRTGNYQQA 609
>gi|298242866|ref|ZP_06966673.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|298251366|ref|ZP_06975169.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|298251990|ref|ZP_06975793.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|297545958|gb|EFH79826.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|297546582|gb|EFH80450.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|297555920|gb|EFH89784.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
Length = 411
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A+ K+V+RL P+ + G A ALG ++ A + HL+P+D +L+ +
Sbjct: 239 YEEALEAFKQVLRLQPDNLFAHRKKGQALQALGRYEEALIIFGQLIHLTPEDLSLFYEKG 298
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ +A+ Q R P D L + + +G ++A ++EQ +L PD
Sbjct: 299 ALFFEAERYCEALAVFDQIFRRNPDDAMLHYYQGLALLRLGRIQEALGAFEQTLQLDPDY 358
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ A +L ++ G++ ++ E+ L+++P A
Sbjct: 359 LPAYIAQGKLLVQSGRSQEALHACEQVLRLNPQTA 393
>gi|74316213|ref|YP_313953.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
25259]
gi|74055708|gb|AAZ96148.1| TPR repeat [Thiobacillus denitrificans ATCC 25259]
Length = 931
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+G K +LS + ++ GEA L E+A +L ++ SP P TY L A G+
Sbjct: 128 QGPKERLSR-ILQLRGEALLNQR--KLEEACNLFQQSYDASPGNPPTYWGLSRCALATGD 184
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
A D+ A L K + W L + DTA+A+ +A++ EP ++ L
Sbjct: 185 AAKARDWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNNLDALQSLV 244
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ +V+ GD ++A E I+KL P + A A + + A + ++E LKV P
Sbjct: 245 AIHVKAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQEALKVSP 302
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
PKDS + + + G +A+A RQ ++ EP+++ + +LAS Y++ D +A E
Sbjct: 777 PKDSGVAAYAAGYYLVTGQSARAAETYRQILKHEPRNVMILNNLASLYLQQRD-PRALEL 835
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
Q +L P N T + ++ GQ R +G L + + P +A L
Sbjct: 836 ATQANRLAPTNPAVQDTLGWVLVEQGQARRGLGYLRKAMAQTPKNASL 883
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
IR PKD + + A +Y+ G +AAE+Y QI K P NV A L+L+ + R
Sbjct: 773 IRQHPKDSGVAAYAAGYYLVTGQSARAAETYRQILKHEPRNVMILNNLASLYLQQ-RDPR 831
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
++ + + ++ P++ +V D L +L+E + L ++ A
Sbjct: 832 ALELATQANRLAPTNP--AVQDTLGWVLVEQGQARRGLGYLRKA 873
>gi|392426317|ref|YP_006467311.1| tetratricopeptide repeat protein [Desulfosporosinus acidiphilus
SJ4]
gi|391356280|gb|AFM41979.1| tetratricopeptide repeat protein [Desulfosporosinus acidiphilus
SJ4]
Length = 395
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 38/267 (14%)
Query: 29 KLSP---GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
KL P G ++L + L+ G++++ + L + R P Y LG+ ++ ++
Sbjct: 122 KLKPQNGGYWEILADCHLEQ--GDWKEGVKALDKSCRAEPKNAVIYYRLGIIYAYHEEYQ 179
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR-AEPKDISLRIHLAS 144
A + L P++S+ W+ ++ + A Y +A+R D++ R LA
Sbjct: 180 EALRCFQGCCQLEPRESSYWEVKGEMHLKLEQLSDACYSFDRALRYGGTPDLAAR--LAY 237
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
Y++ G +K + Y+ K PD+ D+ A ++ GQT ++ +L+ +K++P D
Sbjct: 238 CYIQTGQIKKGIQYYKFTLKYEPDHYDSLSNLAAVYQNQGQTQEALNLLDRAIKIYPQD- 296
Query: 205 DLSVIDLLVAILMENNAYEKTLQHIEHA-QIVRFSGKELPLK-----LKVKAGICYLRLG 258
I++ N A+ TL H A + + K L L + +C R G
Sbjct: 297 ---------PIILNNFAF--TLVHQGKARRAAEYYNKALELSPDHPLILYNLSVCLTRKG 345
Query: 259 NMEKAEILFADLQWKNAIDHADLITEV 285
N W+ ID + + E+
Sbjct: 346 N------------WQECIDSLNKLIEI 360
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 51/118 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++LL +++ P P N G + A ++Y A LSP +
Sbjct: 277 GQTQEALNLLDRAIKIYPQDPIILNNFAFTLVHQGKARRAAEYYNKALELSPDHPLILYN 336
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L +KG+ + + + + I +P + L + Y ++ Y+ A + Y + KL
Sbjct: 337 LSVCLTRKGNWQECIDSLNKLIEIDPNHSAGWALLGNVYDQMNQYDTAVDCYNKALKL 394
>gi|268317298|ref|YP_003291017.1| hypothetical protein Rmar_1745 [Rhodothermus marinus DSM 4252]
gi|262334832|gb|ACY48629.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 402
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 39 GEASLQYAYGNFEQ------AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
GEA+LQ +EQ + +L+E VR +P+ P + LG A G ++ A Y
Sbjct: 258 GEAALQ----RYEQLRELNAQVQMLEEAVRTTPDNPYAFAALGAALRRSGRYEEALRAYT 313
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
IA LSP + + L +GDT AM R+A++A+ I ++L + G+
Sbjct: 314 IALFLSPGNPEILNNLAALYFVQGDTLAAMQTYRRALQADSTFIDAWLNLGVLHALRGER 373
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLF 180
AA ++ Q+ + P + A + A+L+
Sbjct: 374 AAAAYAWRQVLRYDPQHEAARRYLARLY 401
>gi|70953562|ref|XP_745874.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526331|emb|CAH89164.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 1666
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS-ALGNHKSA 87
K++ V ++ +A+ Y N+E+ I LL++V+++SP+L + Y+ LGL + N K A
Sbjct: 285 KMNKEVESLINKANNNYINKNYEECIKLLEQVIKISPDLHDPYHLLGLIYEREYDNLKKA 344
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
++Y+IAAHL+ D W + + + +Y + +A+R
Sbjct: 345 INYYLIAAHLTRNDFLTWYNISNLCKIEKEYNILLYCLYKAMR 387
>gi|334117447|ref|ZP_08491538.1| histidine kinase [Microcoleus vaginatus FGP-2]
gi|333460556|gb|EGK89164.1| histidine kinase [Microcoleus vaginatus FGP-2]
Length = 949
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 21/262 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE+A + + ++ P+ P T + A ++ G A +F+ + + P D+ +
Sbjct: 210 GQFEKAQQIFERALQREPDNPITLSQYANALASNGQLDQALEFFERSLQIPPDDAVTLSR 269
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A + Q+++ +P + A+ G EKA + +E+ ++ P
Sbjct: 270 YANALASNGQFEKAWQFFEQSLQIKPDNAVTLSCYANALASNGQLEKAWQFFERSLQIEP 329
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N A GQ + + ILE L++ P+D ++ L +EKTL+
Sbjct: 330 NNQRILNQYATALASTGQHEKVVQILERSLQLEPNDP--ITLNHYATALASTGQHEKTLE 387
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM-------EKAEILFADLQWKNAIDHAD 280
++ + LKL+ A I R N EKA + F + + + A
Sbjct: 388 LLKRS-----------LKLEPNAPITLSRYANALASTGQHEKA-LQFFERSLQLEPNDAI 435
Query: 281 LITEVADTLMSLGHSNSALKYY 302
++ A+ L S GH + AL+++
Sbjct: 436 TLSRYANALASNGHPDQALQFF 457
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+ + LLK ++L PN P T + A ++ G H+ A F+ + L P D+ +
Sbjct: 380 GQHEKTLELLKRSLKLEPNAPITLSRYANALASTGQHEKALQFFERSLQLEPNDAITLSR 439
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G QA+ + ++I+ +P A G YEKA + +E+ ++ P
Sbjct: 440 YANALASNGHPDQALQFFERSIQIKPNHPRTLSSYAHTLATTGQYEKALQYFERSLQIQP 499
Query: 168 DN 169
N
Sbjct: 500 QN 501
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 86/193 (44%), Gaps = 3/193 (1%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
++ P ++L + A+ + G E+ + +L+ ++L PN P T N A ++ G H+
Sbjct: 326 QIEPNNQRILNQYATALASTGQHEKVVQILERSLQLEPNDPITLNHYATALASTGQHEKT 385
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ + L P + G +A+ + ++++ EP D A+
Sbjct: 386 LELLKRSLKLEPNAPITLSRYANALASTGQHEKALQFFERSLQLEPNDAITLSRYANALA 445
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL- 206
G ++A + +E+ ++ P++ + A GQ +++ E L++ P ++ +
Sbjct: 446 SNGHPDQALQFFERSIQIKPNHPRTLSSYAHTLATTGQYEKALQYFERSLQIQPQNSRML 505
Query: 207 -SVIDLLVAILME 218
S +D A+++E
Sbjct: 506 SSYLDFQYALVLE 518
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 3/217 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A + +++ PN N A ++ G H+ + L P D
Sbjct: 312 GQLEKAWQFFERSLQIEPNNQRILNQYATALASTGQHEKVVQILERSLQLEPNDPITLNH 371
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T G + + ++++++ EP A+ G +EKA + +E+ +L P
Sbjct: 372 YATALASTGQHEKTLELLKRSLKLEPNAPITLSRYANALASTGQHEKALQFFERSLQLEP 431
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
++ A G +++ E +++ P+ + L YEK LQ
Sbjct: 432 NDAITLSRYANALASNGHPDQALQFFERSIQIKPNHP--RTLSSYAHTLATTGQYEKALQ 489
Query: 228 HIEHA-QIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ E + QI + + L L + + ++G ++A
Sbjct: 490 YFERSLQIQPQNSRMLSSYLDFQYALVLEKVGKHQEA 526
>gi|218190772|gb|EEC73199.1| hypothetical protein OsI_07263 [Oryza sativa Indica Group]
Length = 1004
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 9/194 (4%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y N++ I+ +E + + PN E Y + A G+ A +Y+ A L P
Sbjct: 119 GAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRPN 178
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
W L + +KG +A RQA+ P+ + +L + G ++A Y
Sbjct: 179 FCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYI 238
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ ++ P A A LF++ G +++ +E +K+ PS AD A L + N
Sbjct: 239 EALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFAD--------AYLNQGN 290
Query: 221 AYEKTLQHIEHAQI 234
Y KT+ + A I
Sbjct: 291 VY-KTMGMSQEAII 303
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + ++P L + ++ LG A G + A++ Y+ A + P+ + W
Sbjct: 194 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALRIDPQFAIAWSN 253
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P ++ + Y +G ++A SY++ + P
Sbjct: 254 LAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISYQRAVQARP 313
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D A A ++ + GQ +I + + P
Sbjct: 314 DYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + + L N P+ LG + +A FY A ++ S+
Sbjct: 364 GRVEEAINCYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNN 423
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + + EIG +A + Y Q + P
Sbjct: 424 LAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRP 483
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+A A + G +I ++ L++ P
Sbjct: 484 TMAEAHANLASAYKDSGHVETAIVSYKQALRLRP 517
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 83/229 (36%), Gaps = 13/229 (5%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V + L A Y G +++A+ V +P + LG + + N+
Sbjct: 78 VERHLALAHQNYRSGKYKEALEHGNIVYEKNPRRTDNLLLLGAIYYQIRNYDMCIAKNEE 137
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A + P + + + +KGD A+ Y AI+ P +LAS Y G
Sbjct: 138 ALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLN 197
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
+AA+ Q + P VDA L G + E L++ P A L
Sbjct: 198 EAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALRIDPQFA--IAWSNLA 255
Query: 214 AILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEK 262
+ ME +K L + + A +KLK YL GN+ K
Sbjct: 256 GLFMEAGDLDKALLYYKEA-----------VKLKPSFADAYLNQGNVYK 293
>gi|414078778|ref|YP_006998096.1| hypothetical protein ANA_C13625 [Anabaena sp. 90]
gi|413972194|gb|AFW96283.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 383
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Query: 32 PGVTK-----MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
P TK L +A+ +Y G++ AI EV+RL+PN E G+A+ LG++++
Sbjct: 87 PKTTKQKADDFLVQAADKYEIGDYRGAILAYDEVIRLTPNNSEALFYRGMAYYNLGDNQA 146
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A Y ++P D+ + GD A+ QA++ P ++
Sbjct: 147 AIQDYNQVLKINPNDANAYINRGNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTR 206
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
++GD + A E Y Q K+ P++ + + G +I + LK++P+DA
Sbjct: 207 DDLGDKKGAIEDYNQALKINPNDAVSYRNRGNARDDLGDKKGAIEDYNQALKINPNDA 264
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 29 KLSPG-VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K++P + +L+ A G+ + AI + ++++PN E Y GL LG+ K A
Sbjct: 156 KINPNDANAYINRGNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGA 215
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ Y A ++P D+ ++ GD A+ QA++ P D ++ +
Sbjct: 216 IEDYNQALKINPNDAVSYRNRGNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRD 275
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+GD + A + Y Q K+ P+ +A G I + LK++P+
Sbjct: 276 ALGDKQAAIQDYNQALKINPNYAEAYLNRGVARDTLGDKQAVIQDFNQALKINPN 330
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G+ + AI +V++++PN Y G ALG+ ++A Y A ++P +
Sbjct: 139 YNLGDNQAAIQDYNQVLKINPNDANAYINRGNLRDALGDKQAAIQDYNQALKINPNYAEA 198
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ GD A+ QA++ P D + + ++GD + A E Y Q K
Sbjct: 199 YLNRGLTRDDLGDKKGAIEDYNQALKINPNDAVSYRNRGNARDDLGDKKGAIEDYNQALK 258
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ P++ + L G +I + LK++P+
Sbjct: 259 INPNDAVSYLNRGNLRDALGDKQAAIQDYNQALKINPN 296
>gi|301617155|ref|XP_002938005.1| PREDICTED: intraflagellar transport protein 88 homolog [Xenopus
(Silurana) tropicalis]
Length = 826
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P T LG + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDAHTLAKLGELYDNEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS Y G+Y+KA ++Y++I K FPDNV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPDNVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 46/240 (19%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +P + + ++ + G +E+A KE +R + E LGL + L +
Sbjct: 479 SADRYNPAA--LTNKGNIDFINGEYEKAAEYYKEALRNDSSCTEALYNLGLTYKRLNRLE 536
Query: 86 SAFD-FYVIAAHLSPKDSA-LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
A D F+ + A L ++SA + Q+ D QA+ ++ Q I P D L
Sbjct: 537 EALDCFHKLHAIL--RNSAQVLSQIAALYEMLEDPNQAIEWLMQLISVVPTDAHTLAKLG 594
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
Y GD +A + Y + + FP N++
Sbjct: 595 ELYDNEGDKSQAFQYYYESYRYFPSNIE-------------------------------- 622
Query: 204 ADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
VI+ L A ++ EK +Q+ E A +++ + +K ++ CY R GN +KA
Sbjct: 623 ----VIEWLGAYYIDTQFCEKAIQYFERASLIQPT----QVKWQLMVASCYRRSGNYQKA 674
>gi|409436980|ref|ZP_11264139.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium mesoamericanum
STM3625]
gi|408751454|emb|CCM75295.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium mesoamericanum
STM3625]
Length = 961
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 65/154 (42%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+QA + RL+ + PE +TLG + G A + A HLSP+ + L
Sbjct: 756 FDQAAAEFVAAQRLNADRPEGRSTLGNFLARRGMAAEAEVEFRAALHLSPEFAPAAVNLA 815
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
G +R ++A P+D LR L V +G E A E Q KL PD
Sbjct: 816 DLYRALGRDFDGEQVLRTGLQASPEDAGLRYALGLTLVRLGRSEDAFEELRQANKLSPDQ 875
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
A G+T +I +LE+ L HPSD
Sbjct: 876 AQYAYAYAIALNSAGRTDEAIALLEKSLVRHPSD 909
>gi|432093876|gb|ELK25731.1| Transmembrane and TPR repeat-containing protein 1 [Myotis davidii]
Length = 668
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+A++LL++ +R P+ + Y++L + K A + Y P S L
Sbjct: 351 EEAVTLLRDSIRYGPDFADAYSSLASLLAEQERFKEAEEMYQAGIKNCPDSSDLHNNYGV 410
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +GD A E Y++ K+
Sbjct: 411 FLVDTGSPEKAVAHYQQAIKLSPSHDVAMVNLGRLYRSLGDNSMAEEWYKRALKVARKAE 470
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA LF G+ ++ I E + PS +L + + ++A++ + EK HI
Sbjct: 471 TLSPLGA-LFYNTGRYEEALQIYREAAALQPSHRELRLALAQVLAMMGQTKEAEKMTNHI 529
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 11/186 (5%)
Query: 33 GVTKMLGEASLQYAYGNF-------EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
GV + A + Y Y NF +AI + ++L P N LG + N
Sbjct: 261 GVQTLPHNAKVHYNYANFLKDQGRNREAIYHYRTALKLYPRHASALNNLG---TLTRNTA 317
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A +Y A L+P+ + L + +A+ +R +IR P LAS
Sbjct: 318 EAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAVTLLRDSIRYGPDFADAYSSLASL 377
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E +++A E Y+ K PD+ D + G +++ ++ +K+ PS D
Sbjct: 378 LAEQERFKEAEEMYQAGIKNCPDSSDLHNNYGVFLVDTGSPEKAVAHYQQAIKLSPSH-D 436
Query: 206 LSVIDL 211
+++++L
Sbjct: 437 VAMVNL 442
>gi|326437220|gb|EGD82790.1| hypothetical protein PTSG_03440 [Salpingoeca sp. ATCC 50818]
Length = 1080
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
KKRG R KN L ++GEA+ Y ++ A L ++VV +P+ P+ Y+TL L
Sbjct: 176 KKRGVR-SRKNALPSRFINVMGEANKAYTRQAYDVAKRLCQQVVDAAPDCPDPYDTLALV 234
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
+G+ F++ AA P W +L A++ G +A +++A + P
Sbjct: 235 CEEVGDKPKCFEYRKKAASCRPMRDVNWMELAGLAMEIGRDTEASRLLQRAHKLHPD--- 291
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQ 163
HL + + EK ++++ ++
Sbjct: 292 ---HLPTLEAMMAVAEKQGKTFQVVR 314
>gi|378726907|gb|EHY53366.1| hypothetical protein HMPREF1120_01560 [Exophiala dermatitidis
NIH/UT8656]
Length = 1358
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 171/437 (39%), Gaps = 82/437 (18%)
Query: 10 RKKTRKLNKKRGR-----RKGSKNKLSPGVTKMLGEASLQYAY---GNFEQAISLLKEVV 61
RK+ +K RG + G + + PG S A+ + E+A+ L+ + +
Sbjct: 329 RKRRKKGTGTRGGWSKGLKIGPRPPIDPGAEFNQLHKSAMNAFIDDQDTEKALELILKAI 388
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGD---- 117
++P + + L + A G + A AH +P+D +W Q+ + +Q+
Sbjct: 389 AVNPEIYAAHALLSEIYFAKGEDEKAIAALFSGAHSAPRDPEVWWQVASACLQRSSGNRQ 448
Query: 118 TA--QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKT 175
TA QA Y + I +PK+ R+ A+ E+G+Y KA E +++ P + + +
Sbjct: 449 TALQQASYCYARIIHNDPKECDARLQRAALQRELGNYTKAMNDLEFVREHKPRDSNVLRQ 508
Query: 176 GAQLFLKCGQTARSIGILEEYLKVH---------------------------PSDADLS- 207
A++ + R+ + EE L + P+D LS
Sbjct: 509 IAEVCIDTRDLDRAKSLYEEALAYYREAGMDEEDSFTWTDILVYAQLLAQEEPADVSLSN 568
Query: 208 VIDLLVAI---------------LMENNAYEKTLQHIEHAQIVRFSGKELPL-------- 244
I L ++ E++ + + +F + PL
Sbjct: 569 AIKALRSLSRWLLGRGEETFWDDYSEDDREWDSEDDPRRTLVEQFVPGKHPLDTYGTGLP 628
Query: 245 -KLKVKAGICYLRLGNMEKAEILFADLQW---------KNAIDHADLITEVADTLMSLGH 294
+L+V+ G+ LR G E + A +W N D+ DL E A L
Sbjct: 629 LELRVRLGVFRLRQG-PEMLDEALAHFEWLEPDARDEDANVYDYPDLFLEAAQALHEAKQ 687
Query: 295 SNSALKYYHFL-ETNAGTDNGYLYLKLAECYL-SLKERAHAIMFFYKALDRFEDN-IDAR 351
AL+YY L + NA +D + A Y+ KE+A + Y+ ++DN I+AR
Sbjct: 688 HEQALRYYQALKDINAYSDTDFWLGVAANSYICGNKEQA---IECYEEAKAWDDNCIEAR 744
Query: 352 LTLASLLLEEAKEEEAI 368
L+ L + ++ A+
Sbjct: 745 TQLSKLYADMGDKQRAM 761
>gi|13472042|ref|NP_103609.1| hypothetical protein mll2209 [Mesorhizobium loti MAFF303099]
gi|14022787|dbj|BAB49395.1| mll2209 [Mesorhizobium loti MAFF303099]
Length = 658
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 29 KLSP---GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
+L P G+ + G A L+ G+++QAI+ + + L P Y LGLA + GN +
Sbjct: 164 RLDPENNGLYNLRGNAYLRK--GDYDQAITSYSQAIFLDSQDPNQYFNLGLAWTTKGNLE 221
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A Y A L + ++ V++GDT QA+ +AIR +P D + A
Sbjct: 222 RAIADYSQAISLDANHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPGDAETFRNRARI 281
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+ DY++A Y+Q P++ A ++ +T R+I
Sbjct: 282 WERKRDYDRAIADYDQAIAFAPNDAVAYNGRGWMWSLKHETDRAI 326
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-NHKSAFDFYVIAAHLSPKDSALWKQ 107
+F++A++ + + L+P + Y GL + + ++ A + A L P+++ L+
Sbjct: 116 DFDRALADYDKAIELNPQIAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNL 175
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++KGD QA+ QAI + +D + +L + G+ E+A Y Q L
Sbjct: 176 RGNAYLRKGDYDQAITSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDA 235
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ +A + A ++K G T +++ E +++ P DA+
Sbjct: 236 NHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPGDAE 273
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++ +AI+ + +RL P YN G A+ G++ A Y A L +D + L
Sbjct: 151 DYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQAITSYSQAIFLDSQDPNQYFNL 210
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
KG+ +A+ QAI + A +V+ GD ++A Y + +L P
Sbjct: 211 GLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPG 270
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ + + A+++ + R+I ++ + P+DA
Sbjct: 271 DAETFRNRARIWERKRDYDRAIADYDQAIAFAPNDA 306
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 62/157 (39%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++AIS + V + P YN GLA + A Y +A + + ++
Sbjct: 354 GDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAGFVSAYRN 413
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+KG A+ QAI +P D + + DY KA +Q ++ P
Sbjct: 414 RGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLDQAIRIGP 473
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ A T + A ++ +E +++ P +A
Sbjct: 474 KSARAHDTRGLAMVYKADYAGALADYDEAIRLSPKNA 510
>gi|171322912|ref|ZP_02911606.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
gi|171091721|gb|EDT37262.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
Length = 652
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 40 EASLQYAYGN----------FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+ASL A+ N + +A+ +E +R++P+LP+ N G AH LG+ +A
Sbjct: 89 DASLAVAHANLSGVRRRQARYAEALVHAQEAIRIAPDLPDAQNQAGNAHHGLGDLVAAQA 148
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
Y A L+P DS L +++ A+A+ Y RQA+ +S+ ++L
Sbjct: 149 CYRTALELNPADSGACHNLSVVLLKRERHAEALAYCRQALAGGHPTVSMYVNLGDILRAQ 208
Query: 150 GDYEKAAESYEQIQKLFPDNV--DATKTGAQLFLKCGQTA 187
G+ + A +Y L D+ DA + +L +A
Sbjct: 209 GNVDAAVPAYRDALALVRDDASDDAAEVLGRLLFAAAASA 248
>gi|298252040|ref|ZP_06975843.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297546632|gb|EFH80500.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 1170
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 133/294 (45%), Gaps = 22/294 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-- 105
G +E+A++ +EV+RL PN Y+ G LG ++ A + L P+ +
Sbjct: 349 GKYEEALATYEEVIRLDPNGARIYSNKGSVLFQLGRYEEAVAAFEEHIRLDPESPEAYFN 408
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
K A+ + + A AM+ QA+ +P D H + + + YE+A +EQ +L
Sbjct: 409 KGKTLIALDRPEEALAMF--EQALWLDPYDARKYYHKGNMLMALKRYEEALVVFEQSIQL 466
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P+ VDA + + G+ A ++ + E+ L P+ A++ V ++L + +E+
Sbjct: 467 DPEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQ--GSLLYMLDRFEEA 524
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID--HADLIT 283
+E A + ++ L +AG RLG +E+A A L+ +D +AD
Sbjct: 525 ADALEQALCLDPGLTQVYL---AQAGPLQ-RLGRLEEA---VAALEQAIHLDPKNADAYF 577
Query: 284 EVADTLMSL---GHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAI 334
L++L G + +A++ Y L D+ + Y+ E +SL A+
Sbjct: 578 SQGGMLITLKRYGEALNAIEQYMRLR----PDDAFAYVARGEVLVSLNRPEEAL 627
>gi|10440070|dbj|BAB15638.1| unnamed protein product [Homo sapiens]
Length = 561
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
+P+ + VK +C + L +E L L +N D DL +VA+ + +G NSAL
Sbjct: 59 VPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPL 118
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
L + + ++L+ AEC +L A + K +D ++DAR++L++L +
Sbjct: 119 LSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQL 178
Query: 362 AKEEEAITLLSPPKDLDSLDMNSDKS 387
+ E+A+ L P D D+L +++ +
Sbjct: 179 GQPEKALEALEPMYDPDTLAQDANAA 204
>gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus]
gi|342187061|sp|Q3UV71.2|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1
Length = 942
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 625 EEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAV 684
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ KA E Y + K+
Sbjct: 685 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAE 744
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS +L + + ++A++ + EK HI
Sbjct: 745 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHI 803
>gi|406912813|gb|EKD52347.1| hypothetical protein ACD_62C00048G0002 [uncultured bacterium]
Length = 390
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPET-YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
G +E+AI+ +++ P+L E YN LG+ + ++G A + Y A L P+ + +
Sbjct: 190 GLYEEAITSYLIAIKIRPDLSEAAYNNLGITYQSVGQDDKAVEAYTNAILLDPEYTKAYC 249
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
L QKG+ +AM+ ++A++ +P L + Y G+YEKAA+SY
Sbjct: 250 NLGHVRQQKGNYDEAMWAYQEALKIDPAFADAHYGLGNAYGSTGEYEKAADSY 302
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 85/217 (39%), Gaps = 43/217 (19%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI E + +SP + YN LG+A S +G ++ A Y+IA + P
Sbjct: 156 GRYEEAIDAYSEAIMISPAFSDAYNNLGIALSHVGLYEEAITSYLIAIKIRP-------- 207
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
D ++A Y +L Y +G +KA E+Y L P
Sbjct: 208 ---------DLSEAAY----------------NNLGITYQSVGQDDKAVEAYTNAILLDP 242
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ A + + G ++ +E LK+ P+ AD A NAY T +
Sbjct: 243 EYTKAYCNLGHVRQQKGNYDEAMWAYQEALKIDPAFAD--------AHYGLGNAYGSTGE 294
Query: 228 HIEHAQIVRFSGKELP--LKLKVKAGICYLRLGNMEK 262
+ + A + + P + G Y +LG ++K
Sbjct: 295 YEKAADSYLLAIRHNPKDARTYFNLGWSYGKLGQLDK 331
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI LK+ +LSP L + + LGL + + N A Y A + P + +
Sbjct: 88 GQYEKAIFHLKKAGQLSPQLSDAHVNLGLVYLKMDNVDEAIKTYYDALMIDPVNEKAYFG 147
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + G +A+ +AI P +L +G YE+A SY K+ P
Sbjct: 148 LGVAYQRMGRYEEAIDAYSEAIMISPAFSDAYNNLGIALSHVGLYEEAITSYLIAIKIRP 207
Query: 168 DNVDATKTGAQLFLKCGQTARSIG 191
D +A + G T +S+G
Sbjct: 208 DLSEAA------YNNLGITYQSVG 225
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK--DSALWK 106
N+ +I+ ++ + +S + E + +G+A+ LG ++ A A LSP+ D+ +
Sbjct: 55 NYLDSITAFQKALEISSDSAEVHLVMGMAYDGLGQYEKAIFHLKKAGQLSPQLSDAHVNL 114
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L+ + D A YY A+ +P + L Y +G YE+A ++Y + +
Sbjct: 115 GLVYLKMDNVDEAIKTYY--DALMIDPVNEKAYFGLGVAYQRMGRYEEAIDAYSEAIMIS 172
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEE 195
P DA + G +G+ EE
Sbjct: 173 PAFSDA-------YNNLGIALSHVGLYEE 194
>gi|375144739|ref|YP_005007180.1| hypothetical protein [Niastella koreensis GR20-10]
gi|361058785|gb|AEV97776.1| Tetratricopeptide TPR_2 repeat-containing protein [Niastella
koreensis GR20-10]
Length = 897
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 77/159 (48%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y N +AI ++ V L+P + +++ +GN A ++Y A ++P
Sbjct: 674 YDQNNHPKAIEYFQKAVALNPAQSVYLENIASSYALMGNKDEAENYYRKAIAVNPNSHKP 733
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W +L ++K D A+ Y+ +A+ +P + +++A Y + G E+A ++YE+ K
Sbjct: 734 WNELAVIHIEKADYDNAITYLNKALALDPNNYVYTVNIARAYGDTGQKEQAIQAYEKALK 793
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
L ++ + L+ + G ++ + ++++P++
Sbjct: 794 LDGNDYLNWNSLGNLYFETGNMDNAMKAYNKAIQLNPAE 832
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F++A ++ +P N +GL + NH A +++ A L+P S + +
Sbjct: 645 FDKARPYYEQAAVKAPKDDTIQNRIGLTYYDQNNHPKAIEYFQKAVALNPAQSVYLENIA 704
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G+ +A Y R+AI P LA ++E DY+ A + L P+N
Sbjct: 705 SSYALMGNKDEAENYYRKAIAVNPNSHKPWNELAVIHIEKADYDNAITYLNKALALDPNN 764
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
T A+ + GQ ++I E+ LK+ +D
Sbjct: 765 YVYTVNIARAYGDTGQKEQAIQAYEKALKLDGND 798
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP LG + Y F++A + + V L P P + LGLA+ G A
Sbjct: 526 SPRDWNKLG--NFYYRNSQFKEAETCYAKAVELLPEDPIYHENLGLAYKNQGLFDKAEPE 583
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
++ AA L+ KD Q F + A+ + R+A+ +P + +++ +
Sbjct: 584 FLEAARLNTKDGDSLNQAGLFYYDQQKFDDALTWFRKALEKQPDVVDFNVNVGLAFERKK 643
Query: 151 DYEKAAESYEQ 161
+++KA YEQ
Sbjct: 644 EFDKARPYYEQ 654
>gi|310798353|gb|EFQ33246.1| RNA polymerase III transcription factor tfiiic [Glomerella
graminicola M1.001]
Length = 1001
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 17 NKKRGRRKGSKNKLSPGVTKMLGEASLQYAY--GNFEQAISLLKEVVRLSPNLPETYNTL 74
N RG +G + P L A + A+ G++ +A +L+ E++R++ + + L
Sbjct: 83 NTARGGVRGPRKAAEPRGDIKLRLAGVNQAFMSGDYARAQNLVFEIIRINAETHQAWTVL 142
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV------QKGDTAQAMYYIRQA 128
G + A VIAAHL PKD A W +FA+ Q+G A+ A
Sbjct: 143 ASIFREEGLNDKALMAMVIAAHLRPKDFAAWMNCASFAMNLAEAGQEGALKTALMCYSSA 202
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
I+A+P +I R+ A G +A + + + P ++D + A+ G T
Sbjct: 203 IKAQPANIDARLGRAEASHRQGFLSQAITEFSYVIERRPLDIDVVRRLAEACADSGGT 260
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 239 GKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD---------LITEVADTL 289
G LPL+ + + + L++ + E++ LQW + + A LI ++AD L
Sbjct: 362 GLGLPLEFRARLALYRLKIRDEEESN---RHLQWLDPTESATATAVENFPYLIRDIADEL 418
Query: 290 MSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
++ + AL YY L + + L L L CYL+ + A F A++ E +ID
Sbjct: 419 FAVQRYSEALDYYELLRHSIYGQDATLLLHLGRCYLTKSDLVAAEDCFLVAIEVDESSID 478
Query: 350 ARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDK 386
AR+ LA + + +EEEA+ L++ L + +SD+
Sbjct: 479 ARIELARIYEKAKEEEEALILVTEAIALQGISDDSDQ 515
>gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus]
Length = 942
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 625 EEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAV 684
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ KA E Y + K+
Sbjct: 685 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAE 744
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS +L + + ++A++ + EK HI
Sbjct: 745 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHI 803
>gi|354567890|ref|ZP_08987057.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353541564|gb|EHC11031.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 227
Score = 58.9 bits (141), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 82/185 (44%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L + G++ AI++ ++ L P Y+ +G ++ GN +A Y
Sbjct: 40 VKELLEQGRRLVETGDYGGAIAVYQQAANLEPKNASIYSGIGYLYALQGNFSAALTAYRR 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L+P +S L + G+ A R+AI+ +I+ I L + V +G+Y
Sbjct: 100 AVALNPNNSDYQYALGYISGNLGNNNAAKEAYRKAIQLNRGNINAYIGLGTILVRLGEYT 159
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
A +YE+ +L P N + + K G++ +I +L++ ++ + +
Sbjct: 160 SAQWAYEEAVQLAPRNPQVYELRGTILKKQGKSKEAIAVLKKARDLYEQQGKFDSVTRME 219
Query: 214 AILME 218
A L E
Sbjct: 220 ATLRE 224
>gi|336384053|gb|EGO25201.1| hypothetical protein SERLADRAFT_448199 [Serpula lacrymans var.
lacrymans S7.9]
Length = 967
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS V ++GE + Y + +AI +++EV+R+ P ++ L + + A
Sbjct: 60 LSHQVRSLIGEGNQAYVDSDLPEAIRIMQEVIRIEPRAASAWSVLAQCYEDTDEPQKALQ 119
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
++AAHL D+ W +L + G QA+Y R+ R +P ++ A ++
Sbjct: 120 LRIMAAHLR-HDAEEWDRLARHSKDLGYNQQALYCYRKLYRLDPSNVDALWDRACLAKDM 178
Query: 150 GDYEKAAESYEQIQKLFPDNV 170
G+ A S I K FP ++
Sbjct: 179 GELRTARHSLVAILKRFPHDL 199
>gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 261
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+AI EV+R+ P L ++ G A LG + A A L P++ ++W
Sbjct: 74 YEEAIQAFDEVIRIDPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKG 133
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ +G+ +A+ I +AIR EP A E GDY++A + +++ +L PD
Sbjct: 134 SALYFQGEYDEALTAIEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDY 193
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
A +L + + S+ L+ +++ D+DL+
Sbjct: 194 PAAWSNRGELLWRLERYDESLEALDRAIQL---DSDLA 228
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
++ G++E+AI E +RL P P ++ G A ++ A + + P+ ++
Sbjct: 35 FSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEVIRIDPELASA 94
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL-RIHLASFYVEIGDYEKAAESYEQIQ 163
W + G+ +A+ + QAI EP++ S+ + ++ Y + G+Y++A + E+
Sbjct: 95 WSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQ-GEYDEALTAIEEAI 153
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+L PD+ A A + + G +I ++E +++ P
Sbjct: 154 RLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMP 191
>gi|406983319|gb|EKE04534.1| TPR Domain containing protein [uncultured bacterium]
Length = 257
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F A + K ++ P+ P YN LG + LG A + Y A + P +++ L
Sbjct: 17 FNSAANEFKALIEEDPDNPYLYNNLGTIYYKLGKPDEAIESYKKALEIDPNVQGIYQNLA 76
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ D AQA+ ++ AI P + R H A + ++ A + E++ + P+N
Sbjct: 77 DIYLANEDIAQALIELQHAIIINPDNPGPRYHYARVLMRDFRFDAAIDELEKVIEKAPNN 136
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
DA A + + G +I E+ ++ P +AD+
Sbjct: 137 TDAHYDLATAYFQMGNYDGAISEYEKVQEMVPDNADI 173
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ AI L++V+ +PN + + L A+ +GN+ A Y + P ++ ++ L
Sbjct: 119 FDAAIDELEKVIEKAPNNTDAHYDLATAYFQMGNYDGAISEYEKVQEMVPDNADIYYHLA 178
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISL-RIHLASF------YVEIGDYEKAAESYEQI 162
T +A I +AI+ K I L + H S+ Y +++KA ES+E+
Sbjct: 179 V-------TYEANDQIDEAIKGFSKAIELNQAHFLSYRQLGILYTAKQEFDKAIESFEKY 231
Query: 163 QKL 165
K
Sbjct: 232 AKF 234
>gi|193215137|ref|YP_001996336.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088614|gb|ACF13889.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 640
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 170/425 (40%), Gaps = 65/425 (15%)
Query: 3 LINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVR 62
I+ G K+R N ++ + + + V L EA QY+ QAI ++ +
Sbjct: 79 FISVGSLSAKSR--NHQQQSKDRERESMLHFVNGALFEAKQQYS-----QAILEYEDALE 131
Query: 63 LSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD---SALWKQLLTFAVQKGDTA 119
SP P + ++ A+ L N SA + A L + S L QL F ++ + A
Sbjct: 132 YSPKEPAIFFSIAKAYKNLDNQASAITYAKKATELDSTNKWYSDLLGQLY-FDTREFEKA 190
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI------------QKLF- 166
A Y+R +P DIS LA+ Y +KA E Y +I QK
Sbjct: 191 -AEQYLR-ITNKDPNDISALYMLANSYNAANQAQKAIEVYNKIIDIVGFEMDVLSQKFLL 248
Query: 167 ---------------------PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
P+N++ +T ++++ G+ +I ++ L + P+D
Sbjct: 249 HVQLKQYDSAIMTLQDMIIVDPENLELYRTLGDMYIRSGRYQDAIRAYQDVLNIEPTD-- 306
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVR--FSGKELPLKLKVKAGICYLRL----GN 259
LVA+ Y K + + I++ FS ++ K+ Y R N
Sbjct: 307 ---FKALVAL---GETYLKLQDFVNFSVIIKKVFSLHSFEVEDKLGVAEMYFRRIETDTN 360
Query: 260 MEKAEIL-FADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYL 318
M K +L ++Q +N + + + A L S + + E T+ G +
Sbjct: 361 MVKPTLLVLEEIQRENPTEWKVYLLKGALALGQKNFSEAISNFKKVTELQPSTEMG--WE 418
Query: 319 KLAECYLSLKERAHAIMFFYKALDRFED-NIDARLTLASLLLEEAKEEEAITLLSPPKDL 377
L +LSL + A A KAL E+ RL L L +E K++EAIT+LS L
Sbjct: 419 NLGVSHLSLGDYASASAVLKKALQVVENPKFRLRLLLGISLNQEGKDDEAITVLSDAIKL 478
Query: 378 DSLDM 382
DSL +
Sbjct: 479 DSLGL 483
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
NF +AIS K+V L P+ + LG++H +LG++ SA A + + L
Sbjct: 395 NFSEAISNFKKVTELQPSTEMGWENLGVSHLSLGDYASASAVLKKALQVVENPKFRLRLL 454
Query: 109 LTFAV-QKGDTAQAMYYIRQAIRAEP---KDISLRIH----LASFYVEIGDYEKAAESYE 160
L ++ Q+G +A+ + AI+ + D ++ L Y + Y+++ SYE
Sbjct: 455 LGISLNQEGKDDEAITVLSDAIKLDSLGLVDTDSKVQAFSTLGIAYDRLKRYKESINSYE 514
Query: 161 QIQKLFPDNVDATKTGAQLFLKCG-QTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN 219
+ KL P+N A + G Q R + + ++ P + + +D + I +
Sbjct: 515 EAIKLDPNNALVLNNLAYTLAERGEQLERCLDMARIAVENEPDNG--AYLDTMGWIYFKM 572
Query: 220 NAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
YE+ IE A + +G + L G YL+LGN EKA
Sbjct: 573 GKYEEAKVWIEKAVTLGRAGAVVQEHL----GDVYLKLGNKEKA 612
>gi|433773574|ref|YP_007304041.1| TPR repeat-containing protein [Mesorhizobium australicum WSM2073]
gi|433665589|gb|AGB44665.1| TPR repeat-containing protein [Mesorhizobium australicum WSM2073]
Length = 544
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A ++ ++V+ P + LGL G + DF + L P +
Sbjct: 11 GRRQEAEAIYRQVLTRQPKHAAAAHFLGLLLHQTGRSEEGMDFLEQSVQLQPTNPDFLNN 70
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T G A A+ + R A+ P+ ++ R +L S +IG +++A + Y + P
Sbjct: 71 LGTVMRDLGRVAAAIDFFRGAVDLRPEQLAARDNLGSSLKQIGRFDEAEDIYRGTVQRNP 130
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+V A A+ + G+ ++ + +E L + P DADL
Sbjct: 131 FHVRARIGLAETLQEAGRLDEALAVFQEALTIRPRDADL 169
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L + G E+ + L++ V+L P P+ N LG LG +A DF+ A L P+
Sbjct: 40 LLHQTGRSEEGMDFLEQSVQLQPTNPDFLNNLGTVMRDLGRVAAAIDFFRGAVDLRPEQL 99
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
A L + Q G +A R ++ P + RI LA E G ++A +++
Sbjct: 100 AARDNLGSSLKQIGRFDEAEDIYRGTVQRNPFHVRARIGLAETLQEAGRLDEALAVFQEA 159
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ P + D ++ G+ + G+ + + + P
Sbjct: 160 LTIRPRDADLLHGLGVGLMEKGKLDEATGLFRQAVAIQPG 199
>gi|17229291|ref|NP_485839.1| hypothetical protein alr1799 [Nostoc sp. PCC 7120]
gi|17130889|dbj|BAB73498.1| alr1799 [Nostoc sp. PCC 7120]
Length = 402
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A+ E +RL+PNL ETY LGLA G + A Y A + P+ + L
Sbjct: 136 AVQEYGEAIRLNPNLGETYYNLGLALQQQGKKEGAITAYRQALVIDPRRVEAYYNLGLVL 195
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
++G +A+ + A+ EP I+ +LA + G E+A +Y ++ KL P N A
Sbjct: 196 YEQGLLQEAIAAYQDAVNLEPSKINAHHNLAIALQQTGKMEEAIVAYREVLKLDPKNAAA 255
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ L G+ +I + ++ P +A
Sbjct: 256 YSSLGSLMAMQGRPEEAIAAYTQAVRQDPKNA 287
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G ++AI+ ++ V L P+ ++ L +A G + A Y L PK++A
Sbjct: 196 YEQGLLQEAIAAYQDAVNLEPSKINAHHNLAIALQQTGKMEEAIVAYREVLKLDPKNAAA 255
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L + +G +A+ QA+R +PK+ +L G+ +KA+ ++++ Q+
Sbjct: 256 YSSLGSLMAMQGRPEEAIAAYTQAVRQDPKNALAYYNLGITLYNQGELQKASNAFKRAQE 315
Query: 165 LFPD--NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLL 212
+ N++ T+ QL + Q L++ P D S +LL
Sbjct: 316 EYSQQGNLEQTEKTEQLMQQVAQKIEEQK-LQQRQASTPKPTDNSTNNLL 364
>gi|83589994|ref|YP_430003.1| hypothetical protein Moth_1146 [Moorella thermoacetica ATCC 39073]
gi|83572908|gb|ABC19460.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 299
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +A L KE++R +P +N LG + LG ++A D Y A L+P++ +
Sbjct: 40 GRYGEAALLYKEILRTRKRIPGWWNNLGYCYLRLGELETALDCYRTALKLAPRNIDILIN 99
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ A+A +A + +P+D+ L +L V++ E+A + Y Q L P
Sbjct: 100 TGGCYQRLEQWAEAYRCFYRAWKYQPRDVDLLNNLGVCLVQLERPEEALDYYRQALALAP 159
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL 216
+ A +C + ++ E+ L++ P D+S+I+ A L
Sbjct: 160 AEGEIIGNLAAALARCRRWPEAVTCFEKALRLLPE--DVSIINNAAACL 206
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+ +A + P + N LG+ L + A D+Y A L+P + + L
Sbjct: 110 WAEAYRCFYRAWKYQPRDVDLLNNLGVCLVQLERPEEALDYYRQALALAPAEGEIIGNLA 169
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ +A+ +A+R P+D+S+ + A+ +G AA Y + L P
Sbjct: 170 AALARCRRWPEAVTCFEKALRLLPEDVSIINNAAACLEALGKCYLAAPLYARALALKPGE 229
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ A +K G A + I+E L+++P
Sbjct: 230 PQIRQNYAACLMKLGDLATARKIVEGLLRLYP 261
>gi|428301131|ref|YP_007139437.1| hypothetical protein Cal6303_4565 [Calothrix sp. PCC 6303]
gi|428237675|gb|AFZ03465.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 520
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 16/199 (8%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
K L+ + L +A GN+E A+S +E ++L + E Y +GL+ L +
Sbjct: 230 KNPSQSLAELINSYLKTGDDHFARGNYEVAVSRYQEALKLDIDNSEIYYKIGLSKYHLKD 289
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
+ A V L+P +L Q G+ A+ QA++ P D + +H A
Sbjct: 290 YDEAIRDLVKVVSLNPHHLQALHKLGLARYQGGELENAIALFTQALQINPHDARIYVHRA 349
Query: 144 SFYVEIGDYEKAAESYEQIQKL----------------FPDNVDATKTGAQLFLKCGQTA 187
+GD + A E Y Q KL P++V+ + G
Sbjct: 350 EVRSRLGDNQGAIEDYHQAMKLNPIIAENQEYLQPIGIHPEDVEGFRNRGNSRYDIGDFT 409
Query: 188 RSIGILEEYLKVHPSDADL 206
+I L+++P DAD+
Sbjct: 410 GAIQDYTSALQINPHDADI 428
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY--------VIAA 95
+Y G E AI+L + ++++P+ Y S LG+++ A + Y +IA
Sbjct: 318 RYQGGELENAIALFTQALQINPHDARIYVHRAEVRSRLGDNQGAIEDYHQAMKLNPIIAE 377
Query: 96 H--------LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ + P+D ++ GD A+ A++ P D + + A+
Sbjct: 378 NQEYLQPIGIHPEDVEGFRNRGNSRYDIGDFTGAIQDYTSALQINPHDADIYYNRANVKY 437
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
++ D + A + Y Q+ K+ P + +A + L + G +I E+ +++ + L+
Sbjct: 438 DMADIKGALDDYNQVIKINPYDAEAYFSRGNLRRESGDKQGAIEDFEKATELYRQEGKLA 497
>gi|406934936|gb|EKD69050.1| TPR Domain containing protein [uncultured bacterium]
Length = 488
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 145/327 (44%), Gaps = 18/327 (5%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
YG FE A+ K+ + + + Y LG+A+ L N + Y+ A ++PK ++
Sbjct: 8 YGFFESAVDCFKKSIEIDAYSVDAYAGLGVAYLKLNNVDYSLKMYLTALTINPKLVSVLI 67
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ TA A+ Y+ +A EPK+ ++ +L + + ++E A + + ++ K+
Sbjct: 68 SVSNIYASLDKTALAIDYLCKAKVIEPKNTNILNNLGVLHAKTNNFEDAIKCWNEVIKIK 127
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
P +DA + + G +I + +K A L + L + + N +K L
Sbjct: 128 PFELDAYYNLGIAYSEKGFVDAAIFMYSRVVKTGKGSAQL--YNNLGVLYEKKNELKKAL 185
Query: 227 QHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA-----EILFADLQWKNAIDHADL 281
+ + + GK + + G+ Y +L N KA + L + + K A+++ L
Sbjct: 186 EC--YLNSYKMDGKCTEVINNI--GLVYAKLNNYNKAIDSYLKTLDIEPENKKALNNLGL 241
Query: 282 ITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
I + +S + L ++G + + L +A YL++ + +A +F AL
Sbjct: 242 IYGLTGKFY-----DSISTWKKLLNVDSGDYSTHFNLGVA--YLNVGNKTNARYYFESAL 294
Query: 342 DRFEDNIDARLTLASLLLEEAKEEEAI 368
+ +A + SL ++EA+ +EA+
Sbjct: 295 KINPRSAEALMNSGSLYVQEARYDEAV 321
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 1/175 (0%)
Query: 30 LSPGVTKMLGEASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+ P T +L + +A NFE AI EV+++ P + Y LG+A+S G +A
Sbjct: 92 IEPKNTNILNNLGVLHAKTNNFEDAIKCWNEVIKIKPFELDAYYNLGIAYSEKGFVDAAI 151
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
Y + L+ L +K + +A+ + + + K + ++ Y +
Sbjct: 152 FMYSRVVKTGKGSAQLYNNLGVLYEKKNELKKALECYLNSYKMDGKCTEVINNIGLVYAK 211
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ +Y KA +SY + + P+N A ++ G+ SI ++ L V D
Sbjct: 212 LNNYNKAIDSYLKTLDIEPENKKALNNLGLIYGLTGKFYDSISTWKKLLNVDSGD 266
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 111/289 (38%), Gaps = 22/289 (7%)
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
++ E N +GL ++ L N+ A D Y+ + P++ L G +
Sbjct: 193 KMDGKCTEVINNIGLVYAKLNNYNKAIDSYLKTLDIEPENKKALNNLGLIYGLTGKFYDS 252
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
+ ++ + + D S +L Y+ +G+ A +E K+ P + +A L++
Sbjct: 253 ISTWKKLLNVDSGDYSTHFNLGVAYLNVGNKTNARYYFESALKINPRSAEALMNSGSLYV 312
Query: 182 KCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
+ + ++G ++ +KV PS A Y Q ++ +++ +
Sbjct: 313 QEARYDEAVGEFKKVIKVDPS--------FYKAYYNLGTIYYMRRQFLDCEAVMKKAVSY 364
Query: 242 LP--LKLKVKAGICYLRLGNMEKAEILF---ADLQWKNAIDHADLITEVADTLMSLGHSN 296
P + G Y L + EK +F ++ +N I +T+ A L
Sbjct: 365 CPDFVNAYYYLGKLYFELDDGEKGLEMFKKIVEISPENPI----ALTDYAIMLSLQKRHE 420
Query: 297 SALKYYHFLETNAGTDNGYL--YLKLAECYLSLKERAHAIMFFYKALDR 343
A+K + D YL Y L Y LK+ ++ FF K +++
Sbjct: 421 EAVK---LFKKAVRIDKNYLKAYFNLGLSYFELKDMKNSERFFRKCIEK 466
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 104/244 (42%), Gaps = 17/244 (6%)
Query: 30 LSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+ P K L L Y G F +IS K+++ + T+ LG+A+ +GN +A
Sbjct: 228 IEPENKKALNNLGLIYGLTGKFYDSISTWKKLLNVDSGDYSTHFNLGVAYLNVGNKTNAR 287
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
++ A ++P+ + + VQ+ +A+ ++ I+ +P +L + Y
Sbjct: 288 YYFESALKINPRSAEALMNSGSLYVQEARYDEAVGEFKKVIKVDPSFYKAYYNLGTIYYM 347
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
+ ++ PD V+A +L+ + + + + ++ +++ P + +++
Sbjct: 348 RRQFLDCEAVMKKAVSYCPDFVNAYYYLGKLYFELDDGEKGLEMFKKIVEISPENP-IAL 406
Query: 209 IDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELP-----LKLKVKAGICYLRLGNMEKA 263
D AI++ +LQ H + V+ K + LK G+ Y L +M+ +
Sbjct: 407 TDY--AIML-------SLQK-RHEEAVKLFKKAVRIDKNYLKAYFNLGLSYFELKDMKNS 456
Query: 264 EILF 267
E F
Sbjct: 457 ERFF 460
>gi|297569750|ref|YP_003691094.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925665|gb|ADH86475.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
Length = 787
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 135/336 (40%), Gaps = 13/336 (3%)
Query: 40 EASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
E L YA G AI + VR+ + Y LGLAH A GN ++A + A +
Sbjct: 59 EKGLNYAAQGEHSAAILEFRNAVRIDGRFADAYFQLGLAHLATGNAQNALQDFERAVSVD 118
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P + + A+++ + + + A+P+ + +I LA+ + G+ E+AA
Sbjct: 119 PANHDALLHAARLLLAGNQHAESLQRVEKVLAADPEHLEAQIMLATITLMKGEPERAAAV 178
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
EQ P+ +Q++L Q A + L++ L + P AD+ L + +
Sbjct: 179 VEQALASHPELDRLHLLQSQIYLARQQPAAAEAALQKALALPP--ADIGKHRALASFYLN 236
Query: 219 NNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDH 278
N K + A F P + + Y + ++K E FAD A +
Sbjct: 237 QNQANKAEAQLRQAAAA-FPDSPAP---HLDLAVIYAQRQELDKVETSFADA-LAAAPHN 291
Query: 279 ADLITEVADTLMSLGHSNSALKYYH--FLETNAGTDNGYLYLKLAECYLSLKERAHAIMF 336
D+ + G A Y +T A D + +LA+ Y + ++ A
Sbjct: 292 PDIYLRLGAFYREQGRLEQAEAAYQEALTKTEAKAD---IRAQLADLYFNQRQTEQAAAL 348
Query: 337 FYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
+ L + L A LL+ E K +EAIT+LS
Sbjct: 349 VEQVLQENRRHPLGSLVQARLLVNEGKNDEAITILS 384
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 4/164 (2%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
++A+ L + L P+ E + LG+ H A H+ A + P + L+
Sbjct: 478 LDEALQLFTRMNSLLPDNLEVLHNLGVTHLARQEHREAATIFEEILSKRPDFTPALASLV 537
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+Q+ D A+ + I P R+ L ++ D++ A + Q Q+L P
Sbjct: 538 AIKMQQRDLDAAIERVTAQIEKAPNQADYRLLLGELHLAGNDFDAAITALRQAQELDPAA 597
Query: 170 VDATKTGAQLFLKCGQTARSI----GILEEYLKVHPSDADLSVI 209
+ A+L + G+T +I +L + ++ P+ +L+V+
Sbjct: 598 LRPYLLIARLMTETGRTDEAIAEYRALLAKRPELTPARMNLAVL 641
>gi|313240003|emb|CBY32363.1| unnamed protein product [Oikopleura dioica]
Length = 1054
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ Y G + AI + +RL PN P+ Y L A A Y A L P+
Sbjct: 280 ASVYYEQGRLDLAIETYRIAIRLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPE 339
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++ T +AM ++A++A+P + +LAS + G + A E Y+
Sbjct: 340 HADSLNNLANIKREQNRTHEAMELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYK 399
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
Q ++FP DA + + + +I + + ++P+ AD L ++ +
Sbjct: 400 QAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYQSAISINPNFAD--AFSNLASLHKDCG 457
Query: 221 AYEKTLQHIEHAQIVR 236
E+ +Q+ + A VR
Sbjct: 458 NTEEAIQYFDFALRVR 473
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP V +L +S+ + + + +E +R++P L E Y+ LG H G+ + A +F
Sbjct: 68 SPAVLLLL--SSIYFQKRLLDDSAYFSREAIRVNPTLAEAYSNLGNVHKEQGDVQQALEF 125
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y A L P + L D A+ +A++ P +R L + + +G
Sbjct: 126 YKYAVGLKPDFIDGYVNLAAALTSIQDYEGAIKAHMEALQINPNLYGVRSDLGNIFKSLG 185
Query: 151 DYEKAAESYEQ 161
E+A E Y++
Sbjct: 186 RLEEAEECYQK 196
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ G AI K+ +R+ P + Y+ +G + + ++ A Y A ++P
Sbjct: 382 ASILQQQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYQSAISINPN 441
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE---PKDISLRIHLASFYVEIGDY 152
+ + L + G+T +A+ Y A+R P+ R H + + DY
Sbjct: 442 FADAFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARAHCHQYICDWNDY 496
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++E AI E ++++PNL + LG +LG + A + Y A + + + L
Sbjct: 152 DYEGAIKAHMEALQINPNLYGVRSDLGNIFKSLGRLEEAEECYQKAIQCNSTFAVAYSNL 211
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
Q+GD A++ +A++ + + I+L + + E +++A +Y++ L
Sbjct: 212 GCVYNQRGDIWLAIHNFEKAVKLDVTFLDAFINLGNMFKEARIFDRAVSAYQRALALNVG 271
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILMENNA---YE 223
+ A ++ + G+ +I +++ P+ DA ++ + L L+ + A YE
Sbjct: 272 HAVVHGNLASVYYEQGRLDLAIETYRIAIRLQPNFPDAYCNLANALKDRLLVSEAESCYE 331
Query: 224 KTLQ-HIEHA 232
+ L+ H EHA
Sbjct: 332 QALKLHPEHA 341
>gi|326385464|ref|ZP_08207103.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
gi|326210003|gb|EGD60781.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
Length = 677
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 123/304 (40%), Gaps = 18/304 (5%)
Query: 58 KEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGD 117
+EVVR P+ P L A G+ A + +P+D L + V GD
Sbjct: 32 REVVRAQPDDPRAAMVLACALRLCGDAHGAVAALDLPVRAAPEDPVLAGEWGLALVAAGD 91
Query: 118 TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA---AESYEQIQKLFPDNVDATK 174
A+A+ +R A RA+P+ LA G ++A + P +A +
Sbjct: 92 HARAIAPLRLATRAQPRLARTWQALARALRMTGAEDEAWHADAGAVAAASVDPMLAEAAR 151
Query: 175 TGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQI 234
+ G T ++ ++E YL + P DA + I LL + + ++ + H+ A +
Sbjct: 152 A-----MTAGATDKAQALIERYLSLMPDDA--AAIRLLGELAWRSGRQDQAIVHVTQA-V 203
Query: 235 VRFSGKELPLKLKVKAGICYLRLGN-MEKAEILFADLQWKNAIDHADLITEVADTLMSLG 293
G E + + RL ME+A+IL A A D L+ A L+ LG
Sbjct: 204 ALAPGFEAARVFLARMLVEADRLPEAMEQADILVA-----RAPDEPGLVMLRASILVKLG 258
Query: 294 HSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLT 353
++A Y L GT ++L L +L A+ F A+ R + +A +
Sbjct: 259 EQDAARVIYEDLIAR-GTAPAAVFLNLGHVAKTLGHAGKAVEAFRGAIARAPGSGEAWWS 317
Query: 354 LASL 357
LA+L
Sbjct: 318 LANL 321
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 9/255 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ A++ L VR +P P GLA A G+H A +A P+ + W+
Sbjct: 56 GDAHGAVAALDLPVRAAPEDPVLAGEWGLALVAAGDHARAIAPLRLATRAQPRLARTWQA 115
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G +A + A+ A D L A+ + G +KA E+ L P
Sbjct: 116 LARALRMTGAEDEAWHADAGAVAAASVDPML--AEAARAMTAGATDKAQALIERYLSLMP 173
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D+ A + +L + G+ ++I + + + + P V L +L+E + + +
Sbjct: 174 DDAAAIRLLGELAWRSGRQDQAIVHVTQAVALAPGFEAARV--FLARMLVEAD---RLPE 228
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
+E A I+ + P + ++A I ++LG + A +++ DL + A + +
Sbjct: 229 AMEQADILVARAPDEPGLVMLRASIL-VKLGEQDAARVIYEDLIARGTAPAA-VFLNLGH 286
Query: 288 TLMSLGHSNSALKYY 302
+LGH+ A++ +
Sbjct: 287 VAKTLGHAGKAVEAF 301
>gi|224144666|ref|XP_002325368.1| predicted protein [Populus trichocarpa]
gi|222862243|gb|EEE99749.1| predicted protein [Populus trichocarpa]
Length = 873
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 25/255 (9%)
Query: 58 KEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGD 117
+E +RL P E Y + A G+ A +Y+++ L P + W L + ++KG
Sbjct: 7 EEALRLQPRFAECYGNMANAWKEKGDIDRAIRYYLVSIELRPNFADAWSNLASAYMRKGR 66
Query: 118 TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGA 177
+A RQA+ P + +L + G ++A Y + ++ P A A
Sbjct: 67 LNEASQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPSFAIAWSNLA 126
Query: 178 QLFLKCGQTARSIGILEEYLKVHP--SDADLSVIDLLVAILMENNA---YEKTLQHIEHA 232
LF++ G R++ +E +K+ P DA L++ ++ A+ M A Y++ +Q
Sbjct: 127 GLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIMCYQRAVQ----- 181
Query: 233 QIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE----VADT 288
+ + A CY E+ ++ A L +K AI E + +
Sbjct: 182 -----TRPNYAMAFGNLASTCY------ERGQVELAILHYKQAIACDQRFLEAYNNLGNA 230
Query: 289 LMSLGHSNSALKYYH 303
L +G + AL+ Y+
Sbjct: 231 LKDVGRVDEALQCYN 245
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 13/265 (4%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L G+ +A+ KE V+L P P+ Y LG + ALG + A Y A P
Sbjct: 126 AGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIMCYQRAVQTRPN 185
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + L + ++G A+ + +QAI + + + +L + ++G ++A + Y
Sbjct: 186 YAMAFGNLASTCYERGQVELAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEALQCYN 245
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
Q + P++ A ++++ +A + + L V + + + L I +
Sbjct: 246 QCLSIQPNHPQALTNLGNIYMEWNMSAAAASCYKATLAV--TTGLSAPFNNLAVIYKQQG 303
Query: 221 AYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA---EILFADLQWKNAID 277
Y + + +++R + + V G Y +G + +A I +++ A
Sbjct: 304 NYSDAISC--YNEVLRI--EPMAADGLVNRGNTYKEIGRVSEAIQDYIHAINIRPTMAEA 359
Query: 278 HADLITEVADTLMSLGHSNSALKYY 302
HA+L + D+ GH +A+K Y
Sbjct: 360 HANLASAYKDS----GHVEAAIKSY 380
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + L+P L + ++ LG A G + A+ Y+ A + P + W
Sbjct: 65 GRLNEASQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPSFAIAWSN 124
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +PK ++L + Y +G ++A Y++ + P
Sbjct: 125 LAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIMCYQRAVQTRP 184
Query: 168 DNVDATKTGAQLFLKCGQTARSI 190
+ A A + GQ +I
Sbjct: 185 NYAMAFGNLASTCYERGQVELAI 207
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 60/154 (38%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A+ + + + PN P+ LG + +A Y ++ SA +
Sbjct: 235 GRVDEALQCYNQCLSIQPNHPQALTNLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFNN 294
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ + A+ + +R EP ++ + Y EIG +A + Y + P
Sbjct: 295 LAVIYKQQGNYSDAISCYNEVLRIEPMAADGLVNRGNTYKEIGRVSEAIQDYIHAINIRP 354
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+A A + G +I + L + P
Sbjct: 355 TMAEAHANLASAYKDSGHVEAAIKSYRQALLLRP 388
>gi|85858724|ref|YP_460926.1| hypothetical protein SYN_00192 [Syntrophus aciditrophicus SB]
gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
SB]
Length = 563
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 22/331 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + AI L+ +R P L + G+ + A D + P D +
Sbjct: 55 GRLDDAIQELETALRHDPLSSHLMKELASLYVEKGDFRRAVDLCKESLVHDPDDVDVHLI 114
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + D A+ R+ I +PK+ S ++L + Y E Y+KA + Y + K
Sbjct: 115 LGNLYINMKDYKNAIRSYRKVIEIDPKNTSAYLYLGTLYAETERYDKAVDMYSLLLKNDH 174
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
DNV T A++ ++ + + + ++ L + PS + ++IDL A+L E +
Sbjct: 175 DNVMGTYYMAKVLVELRRESEAEQYFKKTLLLKPS-LESALIDL--ALLYERQKKLEQAV 231
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
+I I R+ + + ++++ G YLR GN + AE +F D ID ++ D
Sbjct: 232 NIYKDFIQRYPEQ---VGIRLRLGEFYLRQGNYQAAEAVFRD---SLTIDDSN-----KD 280
Query: 288 TLMSLG-------HSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
+LG + A++ + A +D Y LA Y +E A+ + K
Sbjct: 281 VHFTLGLLYYEQQRYDRAIEAFQKALKLAPSDQKIYYF-LASVYDEQQENDKAMDTYGKV 339
Query: 341 LDRFEDNIDARLTLASLLLEEAKEEEAITLL 371
E +AR+ + LL EE + + AI+L+
Sbjct: 340 APDSEWYGNARIRMGMLLREEGRIDAAISLI 370
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGN-------FEQAISLLKEVVRLSPNLPETYNTLGLAH 78
++N L G+ L Y G FE +I +K V+ + P E N +G ++
Sbjct: 400 AENLLKEGLKDFPRSEELHYGLGEVYSKMDRFEDSIKEMKRVLEIDPEHAEALNFIGYSY 459
Query: 79 SALGNHKSAFDFYVIAAH-LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
+ G H + + + A L P + + + ++ QA+ Y+++A + P D +
Sbjct: 460 AERGIHLAEAEKLIRQALILKPDNGYILDSMGWVYFKQNRIEQAIRYLKEADKRIPDDPT 519
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ HL + G +++A ++Y + QK P+N
Sbjct: 520 IAEHLGDALRKAGRFQEALDAYRRAQKYAPEN 551
>gi|359462871|ref|ZP_09251434.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 237
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI L + + P+ E + + L LGN++ A A + P W
Sbjct: 48 GRYEEAIDSLDHALEIQPSCYEAWYSRALYLHCLGNNREAITSLHSALKIQPNYLLAWDM 107
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ G +A+ A+ EP D+ + I+ A V +G ++A S +Q ++ P
Sbjct: 108 RGLILIELGRFEEALASFDHALDIEPDDVQIWINKAGAQVLLGRKKEATHSLKQALEVTP 167
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
DN K + L GQ +I + L + P D ++
Sbjct: 168 DNYPDWKMLGDMLLDLGQYEEAITSFDHALDIKPKDFEI 206
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 97/223 (43%), Gaps = 10/223 (4%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G FE+A+ + ++++ + G++ LG ++ A D A + P
Sbjct: 11 YDLGQFEEAVMTCDQALQVNHKDDAVWFRRGISLGKLGRYEEAIDSLDHALEIQPSCYEA 70
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W + G+ +A+ + A++ +P + +E+G +E+A S++
Sbjct: 71 WYSRALYLHCLGNNREAITSLHSALKIQPNYLLAWDMRGLILIELGRFEEALASFDHALD 130
Query: 165 LFPDNVD--ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAY 222
+ PD+V K GAQ+ L G+ + L++ L+V P + +L +L++ Y
Sbjct: 131 IEPDDVQIWINKAGAQVLL--GRKKEATHSLKQALEVTPD--NYPDWKMLGDMLLDLGQY 186
Query: 223 EKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
E+ + +HA + K ++ GI +LG +A I
Sbjct: 187 EEAITSFDHALDI----KPKDFEIWFLRGIALRKLGRYVRAII 225
>gi|406905806|gb|EKD47161.1| hypothetical protein ACD_66C00191G0001, partial [uncultured
bacterium]
Length = 729
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E A L+ + P T LG+ +A GN SA ++ AA L P++++
Sbjct: 224 GQMECAKEYLERSFAADGHNPYTLYQLGIYANANGNVDSAEKYFAEAAKLMPQNASYQVA 283
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L A+QK D +A R+ ++ P DI+ + LA+ G + Y+++ L+
Sbjct: 284 LANVALQKSDFEKAEQIYRKILQTNPNDITTNLSLANVLAARGKLTECDTVYKKLLSLYA 343
Query: 168 DNVDATKTGAQLFLK-CGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
DN T A L CG+ + I + L + P+D + V+ L I Y++
Sbjct: 344 DNSYLQITYAFFLLGFCGRFEEAKAIFTKLLAIDPNDQN--VLQGLAQIEFTQGNYDECR 401
Query: 227 QHIEHAQIV 235
H++ + +
Sbjct: 402 THLDRIKAI 410
>gi|148678797|gb|EDL10744.1| cDNA sequence BC023818 [Mus musculus]
Length = 569
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 252 EEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAV 311
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ KA E Y + K+
Sbjct: 312 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAE 371
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS +L + + ++A++ + EK HI
Sbjct: 372 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHI 430
>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 406
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A+ +V++L+P + +N GL + LG + + + Y A ++PK + W
Sbjct: 202 YEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKG 261
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G +A+ +A+ +P+D + E+G YE A E +++ ++ P+
Sbjct: 262 VVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECFQKALEINPEF 321
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
DA K + + S+ ++ LK++P + L
Sbjct: 322 ADAWKWKGIILEDLKEPEESLKCYKKALKLNPQNKTL 358
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 69/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++++ ++ ++++P L E +N G+ S LG ++ A + Y A + P+D W
Sbjct: 234 GRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNN 293
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G A+ ++A+ P+ ++ + E++ + Y++ KL P
Sbjct: 294 KGLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNP 353
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
N + K G+ ++ E+ LK+ P
Sbjct: 354 QNKTLWYMQGKTLQKLGKHKEALKCYEKSLKIDP 387
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+A+ +++++ +P L E +N GL LG + A + Y A ++PK + W
Sbjct: 67 EKALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKAL 126
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ G +A+ +A++ PK + S + + Y+KA + +E+ +L P N
Sbjct: 127 VLKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNY 186
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
A T G T ++ I EE LK + L+ D
Sbjct: 187 RAWGTK-------GITLHNLKIYEEALKCYDKVLQLNPQD 219
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G +SL+ G +++A+ ++ ++ PN PE + + L + A + Y +
Sbjct: 23 GRSSLKQ--GKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKILKNN 80
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
PK + W + G +A+ +A++ PK + A E+G Y++A E
Sbjct: 81 PKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALEC 140
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
YE+ ++ P DA + + + +++ E+ ++++P +
Sbjct: 141 YEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKN 185
>gi|282165353|ref|YP_003357738.1| hypothetical protein MCP_2683 [Methanocella paludicola SANAE]
gi|282157667|dbj|BAI62755.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 358
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 95/221 (42%), Gaps = 11/221 (4%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+QA S + + L P P+ + + LG ++ +++ PK W
Sbjct: 60 FDQAFSCFERALTLQPQNPKFWYNKSILFRELGMYEDEAGACLMSLKFDPKSVQAWHSCA 119
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G++ +A+ + +A+ EP L +L S+ +G +KA ESY++ + PDN
Sbjct: 120 RSLARIGESEEALSCMDKALELEPMSADLWFYLGSYQYSLGMLDKALESYDRAIFIEPDN 179
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
A ++ K G+ A ++ + +++ P A + + ++ Y+ L +
Sbjct: 180 AAAWMGRGEVLSKEGKEAEALECYDRSIRISPDIAGAWYGKGM--LFIKGGKYDDALAML 237
Query: 230 E--------HAQIVRFSGKELPLKLKVKAGI-CYLRLGNME 261
+ HA + G L L +++ + CY ++ ++
Sbjct: 238 DKAVEMRDGHADAWFYRGCVLELSGRIREALDCYRKVTELQ 278
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 67/158 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E ++ P + +++ + + +G + A A L P + LW
Sbjct: 92 GMYEDEAGACLMSLKFDPKSVQAWHSCARSLARIGESEEALSCMDKALELEPMSADLWFY 151
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ G +A+ +AI EP + + + + G +A E Y++ ++ P
Sbjct: 152 LGSYQYSLGMLDKALESYDRAIFIEPDNAAAWMGRGEVLSKEGKEAEALECYDRSIRISP 211
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
D A LF+K G+ ++ +L++ +++ AD
Sbjct: 212 DIAGAWYGKGMLFIKGGKYDDALAMLDKAVEMRDGHAD 249
>gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101]
gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 3145
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L+ G + AI LL +V+ L P E Y+ L G + A Y A L P
Sbjct: 1034 AVLENLAGRNDIAIQLLNQVINLYPGFTEAYSNLAKLMKKEGRLEEAIAHYQKAISLEPN 1093
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+S+ + L ++KG A+ ++I P + +L + E GD KA+ Y+
Sbjct: 1094 NSSNYSNLGFIFLEKGQIESAIINSEKSIEINPNNSQGNFNLGFAWAEKGDLSKASTYYQ 1153
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ L PD A +F + G +++ ++ L+++P+ A+
Sbjct: 1154 KAINLQPDYAQAHNNLGLIFQEKGNLSKASNYYQQALEINPNYAE 1198
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L+ G + AI LL +V+ L+P + Y+ L G + A Y A L P
Sbjct: 1685 AVLENLAGRNDIAIQLLNQVINLNPGFTKAYSNLAKLMKKEGRLEEAIAHYQKAIELEPN 1744
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+S+ + L +QKG A+ +++ + P + I+L + + G+ KA Y+
Sbjct: 1745 NSSNYSSLGWIFLQKGQIDLAIINYKKSRKINPNSSWININLGFVWEKNGNLPKANTYYQ 1804
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ ++ P++ +A + K GQ +I ++ L+++P
Sbjct: 1805 KAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLELNP 1845
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++LG + Y EQAI+ ++ ++++ N ET+N L +A +A I
Sbjct: 46 VLELLGLCA--YKNNQIEQAIAYYQKSLKVNYNYAETHNNLAVALQDNQQIDAALRHCKI 103
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L P + W L KG A+ + ++++ +P + + L + +E+G
Sbjct: 104 AIKLCPNYAEAWHNLGLILRDKGQFEAAIEHYQKSLEIKPNNAEVYHSLGTISLELGKLS 163
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCG 184
++ + Y++ KL + ++A A + LK G
Sbjct: 164 ESQKYYQEALKLDKNYLNAHFGLAAVLLKQG 194
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 52/103 (50%)
Query: 58 KEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGD 117
K ++L PN E ++ LGL G ++A + Y + + P ++ ++ L T +++ G
Sbjct: 102 KIAIKLCPNYAEAWHNLGLILRDKGQFEAAIEHYQKSLEIKPNNAEVYHSLGTISLELGK 161
Query: 118 TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+++ Y ++A++ + ++ LA+ ++ G + YE
Sbjct: 162 LSESQKYYQEALKLDKNYLNAHFGLAAVLLKQGSLMQGFSEYE 204
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 3/169 (1%)
Query: 19 KRGRRKGSKNKLSPGV---TKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLG 75
K+ K + NKL V +K+L A +Y GNFE+A + +++ P++ + LG
Sbjct: 2219 KKALGKYTSNKLKKTVNNYSKLLQTALEKYKAGNFEEAEQICHLIIQDKPDVAGAFEILG 2278
Query: 76 LAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKD 135
L + A L+P + + L + A+ + ++A+ +P
Sbjct: 2279 LCAQKTDKTNLVITYCQKAISLNPNNEQTYLNLAIALKNQHKFNAAIIHNQKALSRKPNY 2338
Query: 136 ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCG 184
+L + G+ ++ Y++ + P+ +DA + +FLK G
Sbjct: 2339 AEAWHNLGQIFKGKGEITESIRCYQKALSIRPNYIDAHFGFSLIFLKQG 2387
>gi|322418470|ref|YP_004197693.1| hypothetical protein GM18_0939 [Geobacter sp. M18]
gi|320124857|gb|ADW12417.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 598
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN++QAI+ L E VRL PNL E LG A+ G AF+ YV A L+P D+ ++ +
Sbjct: 490 GNYDQAIAALSEAVRLDPNLAEARVNLGDAYRLSGMIDQAFEQYVAALKLTPTDADIYNK 549
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
+ T + D +A+ + + A+ P RI L
Sbjct: 550 IGTIHALRQDMEKAIVFYQSALSMNPSRPQYRIDL 584
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 54 ISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
+SL +VVR SP + L LA G + + +IA LSPK++ + + T
Sbjct: 428 LSLWTDVVRKSPQKARPHYNLALALDKAGRLDQSLEQALIAVRLSPKEAPPYNLIGTIFG 487
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+KG+ QA+ + +A+R +P R++L Y G ++A E Y KL P + D
Sbjct: 488 RKGNYDQAIAALSEAVRLDPNLAEARVNLGDAYRLSGMIDQAFEQYVAALKLTPTDAD 545
>gi|428319215|ref|YP_007117097.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
gi|428242895|gb|AFZ08681.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
Length = 3281
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V L +A+L G +++AI+ +EV+++ PN YN LG A LG +A +Y
Sbjct: 84 VEAHLNKANLLLDVGEYQRAIASYEEVIKIQPNSVLAYNNLGWAKQQLGEIDAAILYYQT 143
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L L QK +A+ Y A++ P + L + + G +
Sbjct: 144 ALQLDSNLHETAHNLGHLYKQKNQLNEAIAYYLHALKVNPNLTYSLMGLGTVLQQQGKFA 203
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+A Y+Q KL P+N +A F + G +I + LK+ P
Sbjct: 204 EAFNCYQQAVKLDPNNPEAHNNVGAFFHEQGNAKVAISHYRQALKLKP 251
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +AI+ ++ + + NL ET + LG A + G + A Y A L+P
Sbjct: 1253 GQLTEAIAHYRQALAIDRNLAETASNLGSALAEAGETEEAIAEYERALSLNPNCPEALIN 1312
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG-------DYEKAAESYE 160
L ++GD A+A+ QAI+ P + ++L E G +YE+A +YE
Sbjct: 1313 LGLLREEQGDVAEAISCYEQAIQVNPNCAAAYLNLGIALEEQGEEAAAGANYERAIANYE 1372
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN 219
+ + P+ +DA A ++ G+ A +I + L + P DL+ DL + + N
Sbjct: 1373 RAIAIEPNYLDALHNLAYASIRQGRVADAIAYYDRALALQP---DLAETDLALGSWLSN 1428
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E AI +E + + PN+P+T L G ++A Y A P
Sbjct: 724 GELEAAIPHYREALAIDPNIPQTAYNLAKIFEEQGQVEAAIAHYEQALVAQPDFVPALIN 783
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +KG+ +A+ R+A+ P +LA+ E G+ E A E Y + +L P
Sbjct: 784 LAVALQEKGELLRAIDLYRRALEIHPHSWEAYNNLATVLQEQGNLEDALEYYHKALELLP 843
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D V+A + FL+ G +I + + P+ A
Sbjct: 844 DFVEAINNLGRTFLEKGAVEDAISCYRRAIHLSPNHA 880
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 29 KLSPGVT-KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K++P +T ++G ++ G F +A + ++ V+L PN PE +N +G GN K A
Sbjct: 180 KVNPNLTYSLMGLGTVLQQQGKFAEAFNCYQQAVKLDPNNPEAHNNVGAFFHEQGNAKVA 239
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y A L P L V G+ +A +A+ +P + + L +
Sbjct: 240 ISHYRQALKLKPDFVEAINNLGHALVDLGEFQEAFSCHIRALELQPDNAIAHLELGLTLL 299
Query: 148 EIGDYEKAAESYE 160
GD+++ YE
Sbjct: 300 LFGDFQRGFAEYE 312
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 70/192 (36%), Gaps = 37/192 (19%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +A + + + + PN + +N LG+ GN A + A L+P
Sbjct: 1923 GDLAEAAAYYQRAIEIDPNCAQAHNNLGILLQDRGNIPDAVSCFQKAIALNPIYVKALNN 1982
Query: 108 LLTFAVQKGDTAQAMYYIRQ----------------------------------AIRAEP 133
L T Q+GD A+ Q AI AEP
Sbjct: 1983 LGTILQQQGDLPTAIACFHQALSVNSNYVPALVNLGVAMQAQSQLDEAQRLYERAIEAEP 2042
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
D + HL + + G E+A S E+ L P+ ++A F + G R+I
Sbjct: 2043 NDPAGHYHLGTLCLGAGKIEQAISSLERAISLNPNYIEAITNLGSAFEQAGDINRAIVCY 2102
Query: 194 EEYLKVHPSDAD 205
+ L++ DAD
Sbjct: 2103 NKALEI---DAD 2111
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 18/226 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI+ + + ++ N LG+A A A Y A P D A
Sbjct: 1991 GDLPTAIACFHQALSVNSNYVPALVNLGVAMQAQSQLDEAQRLYERAIEAEPNDPAGHYH 2050
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T + G QA+ + +AI P I +L S + + GD +A Y + ++
Sbjct: 2051 LGTLCLGAGKIEQAISSLERAISLNPNYIEAITNLGSAFEQAGDINRAIVCYNKALEIDA 2110
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA-----------DLSVIDLLVAIL 216
D V A + + L G R + E + + D S ++ +L
Sbjct: 2111 DCVKAHFNLSLVLLLTGDLPRGLAEYEWRWQTEQAKKLPRLNFDRPVWDGSDLNGQTILL 2170
Query: 217 MENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEK 262
+ +Q + +A IV+ G ++ L CY L + K
Sbjct: 2171 RSEQGFGDAIQFVRYAAIVQQKGGKVILS-------CYQELKRLFK 2209
>gi|172087340|ref|XP_001913212.1| UDP-N-acetylglucosaminyltransferase [Oikopleura dioica]
gi|42601339|gb|AAS21365.1| UDP-N-acetylglucosaminyltransferase [Oikopleura dioica]
Length = 1070
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ Y G + AI + +RL PN P+ Y L A A Y A L P+
Sbjct: 280 ASVYYEQGRLDLAIETYRIAIRLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPE 339
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++ T +AM ++A++A+P + +LAS + G + A E Y+
Sbjct: 340 HADSLNNLANIKREQNRTHEAMELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYK 399
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
Q ++FP DA + + + +I + + ++P+ AD L ++ +
Sbjct: 400 QAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYQSAISINPNFAD--AFSNLASLHKDCG 457
Query: 221 AYEKTLQHIEHAQIVR 236
E+ +Q+ + A VR
Sbjct: 458 NTEEAIQYFDFALRVR 473
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 152/371 (40%), Gaps = 42/371 (11%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP V +L +S+ + + + +E +R++P L E Y+ LG H G+ + A +F
Sbjct: 68 SPAVLLLL--SSIYFQKRLLDDSAYFSREAIRVNPTLAEAYSNLGNVHKEQGDVQQALEF 125
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y A L P + L D A+ +A++ P +R L + + +G
Sbjct: 126 YKYAVGLKPDFIDGYVNLAAALTSIQDYEGAIKAHMEALQINPNLYGVRSDLGNIFKSLG 185
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
E+A E Y++ + A ++ K G +I E+ +K+ D++ +D
Sbjct: 186 RLEEAEECYQKAXQCNSTXAVAYSNLGCVYNKRGDIWLAIHNFEKAVKL-----DVTFLD 240
Query: 211 LLV--------AILMEN--NAYEKTLQ-HIEHAQI---------------VRFSGKELPL 244
+ A + + +AY++ L ++ HA + + + +
Sbjct: 241 AFINLGNMFKEARIFDRAVSAYQRALALNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300
Query: 245 KLKVKAGICYLRLGNMEKAEILFADLQ--WKNAI----DHADLITEVADTLMSLGHSNSA 298
+L+ Y L N K +L ++ + ++ A+ +HAD + +A+ ++ A
Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360
Query: 299 LKYYHFLETNAGTDNGYLYLKLAECYLSLKERAH-AIMFFYKALDRFEDNIDARLTLASL 357
++ Y A D + LA L + R H AI + +A+ F DA + +
Sbjct: 361 MELYQ-RALKAKPDFPAAHSNLASI-LQQQGRHHDAIEHYKQAIRIFPQFADAYSNMGNT 418
Query: 358 LLEEAKEEEAI 368
E A+ +EAI
Sbjct: 419 YKEMARNQEAI 429
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ G AI K+ +R+ P + Y+ +G + + ++ A Y A ++P
Sbjct: 382 ASILQQQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYQSAISINPN 441
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE---PKDISLRIHLASFYVEIGDY 152
+ + L + G+T +A+ Y A+R P+ R H + + DY
Sbjct: 442 FADAFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARAHCHQYICDWNDY 496
>gi|442611076|ref|ZP_21025782.1| TPR repeat [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441747004|emb|CCQ11844.1| TPR repeat [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 318
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 57 LKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL-LTFA-VQ 114
+ + +P+ PE Y+ G + G ++ A + + ++ D ++L +A +
Sbjct: 5 INRIAHFNPDTPELYSLYGSLFNEKGQYQKAVEALTQSIQVNKNDVEAHRRLAWAYANLH 64
Query: 115 KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATK 174
+ D A+A++ Q + P D++++++L FY E G+Y+KA E + I ++ P++ A +
Sbjct: 65 QVDHAKAVF--EQTLLLAPHDVTVKLNLGLFYKEQGEYKKAIEVFRHILEIVPNHKFAVQ 122
Query: 175 TGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
A + G+ ++I ++ ++++P+ S L A+L Y++ EHA
Sbjct: 123 NMANCYFWLGEIDKAITYTQQAIQINPTANSYSA---LGAMLFSKLEYKRAADAFEHA 177
>gi|222622881|gb|EEE57013.1| hypothetical protein OsJ_06783 [Oryza sativa Japonica Group]
Length = 1004
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 9/194 (4%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y N++ I+ +E + + PN E Y + A G+ A +Y+ A L P
Sbjct: 119 GAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRPN 178
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
W L + KG +A RQA+ P+ + +L + G ++A Y
Sbjct: 179 FCDAWSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYI 238
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ ++ P A A LF++ G +++ +E +K+ PS AD A L + N
Sbjct: 239 EALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFAD--------AYLNQGN 290
Query: 221 AYEKTLQHIEHAQI 234
Y KT+ + A I
Sbjct: 291 VY-KTMGMSQEAII 303
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 29 KLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P + Y + G +A ++ + ++P L + ++ LG A G + A
Sbjct: 174 QLRPNFCDAWSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEA 233
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
++ Y+ A + P+ + W L ++ GD +A+ Y ++A++ +P ++ + Y
Sbjct: 234 YNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYK 293
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+G ++A SY++ + PD A A ++ + GQ +I + + P
Sbjct: 294 TMGMSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 64/154 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI+ + + L N P+ LG + +A FY A ++ S+
Sbjct: 364 GRVKEAINCYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNN 423
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + + EIG +A + Y Q + P
Sbjct: 424 LAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRP 483
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+A A + G +I ++ L++ P
Sbjct: 484 TMAEAHANLASAYKDSGHVETAIVSYKQALRLRP 517
>gi|394987864|ref|ZP_10380703.1| hypothetical protein SCD_00264 [Sulfuricella denitrificans skB26]
gi|393793083|dbj|GAB70342.1| hypothetical protein SCD_00264 [Sulfuricella denitrificans skB26]
Length = 951
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 4/203 (1%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+ L+ G +A + + +V P E Y LG A G A + A P
Sbjct: 703 QTELELKAGKLSEAEARARRIVSRYPGQGEGYRLLGNIAVARGRFDEAMTHFRTALDKEP 762
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
A + L ++Q G A A + ++A P D + R+ LA ++ +G+ A Y
Sbjct: 763 GTDAAIR-LYQASIQAGRQAHATGVMTSWLKAHPNDDAARLALAEGHLRVGNIVAARAVY 821
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN 219
E I K + V A + L+ G+ A ++ E ++ PSDA +V D L +L+
Sbjct: 822 ETILKRRGETVGILNNLAGILLQQGEAA-ALNYAERAYRLAPSDA--AVADTLGWVLVRQ 878
Query: 220 NAYEKTLQHIEHAQIVRFSGKEL 242
EK L+++ A++ S E+
Sbjct: 879 GQAEKGLRYLREAKLRNSSNAEI 901
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 10/188 (5%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH-- 84
K+ P V L A L G QA+ + + + RL PN P N LG+A A +
Sbjct: 454 KDPGQPQVGATL--AILHIKRGQPRQAVQVAEAMTRLEPNSPLALNLLGVARVAANDRAG 511
Query: 85 -KSAFDFYVIAAH-LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
++A+D V A H P L K V +G A + ++ +P + L
Sbjct: 512 GRAAYDKAVTADHHFIPARLNLAK----LDVMEGKHDAARERLAVILKEQPINTQAMSEL 567
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A+ +G + A + ++I L P N+ A+++L+ G+T +++ + ++ + +
Sbjct: 568 ANVEESLGRLDAAIQQLQKIHSLEPKNIGPGVHLAEIYLRRGETEKALNLAKDLENANSA 627
Query: 203 DADLSVID 210
D ++ I+
Sbjct: 628 DLEVLAIE 635
>gi|47848089|dbj|BAD21873.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
gi|47848095|dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
Length = 953
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 9/194 (4%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y N++ I+ +E + + PN E Y + A G+ A +Y+ A L P
Sbjct: 119 GAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRPN 178
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
W L + KG +A RQA+ P+ + +L + G ++A Y
Sbjct: 179 FCDAWSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYI 238
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ ++ P A A LF++ G +++ +E +K+ PS AD A L + N
Sbjct: 239 EALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFAD--------AYLNQGN 290
Query: 221 AYEKTLQHIEHAQI 234
Y KT+ + A I
Sbjct: 291 VY-KTMGMSQEAII 303
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 29 KLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P + Y + G +A ++ + ++P L + ++ LG A G + A
Sbjct: 174 QLRPNFCDAWSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEA 233
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
++ Y+ A + P+ + W L ++ GD +A+ Y ++A++ +P ++ + Y
Sbjct: 234 YNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYK 293
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+G ++A SY++ + PD A A ++ + GQ +I + + P
Sbjct: 294 TMGMSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + + L N P+ LG + +A FY A ++ S+
Sbjct: 364 GRVEEAINCYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNN 423
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + + EIG +A + Y Q + P
Sbjct: 424 LAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRP 483
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+A A + G +I ++ L++ P
Sbjct: 484 TMAEAHANLASAYKDSGHVETAIVSYKQALRLRP 517
>gi|23095913|dbj|BAC16228.1| putative TPR-containing nuclear phosphoprotein [Oryza sativa
Japonica Group]
Length = 1069
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 140/308 (45%), Gaps = 41/308 (13%)
Query: 115 KGDTAQAMYYIRQAIR--AEPKDISLRIH-LASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
KGD A Y ++ ++P+D L L ++ DY+ + S+E++ ++ P+N +
Sbjct: 328 KGDIETAGRYYMASVNEISKPQDFVLPFFGLGQIQLKFADYKSSLASFEKVLEVHPENCE 387
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSD--ADLSVIDLLVAILMENNAYEKTLQHI 229
+ K ++ K G+ ++I ++ ++ P D A + + +LLV + + ++++
Sbjct: 388 SLKAIGHIYAKSGENDKAIETFKKVTRIDPKDHQAFMELGELLV-----QSDWATAMEYL 442
Query: 230 EHAQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF----ADLQWKNAIDHADLITE 284
+ A+ +++ +G+++P++L G+ + G +E AE F D W + ID +
Sbjct: 443 KTARNLLKKAGEKIPIELLNGIGLLHFEKGELEMAEQSFKEALGDGFWVSIIDGS----- 497
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGT------DNGYLYLKLAECYLSLKERAHAIMFFY 338
V ++++ ++ LE GT D A + L + A +F+
Sbjct: 498 VGSSVVNWSIQYRDQSFFQQLEEE-GTPLELPWDKVTTLFNYARLFEELHDTVKASLFYR 556
Query: 339 KALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD-----------SLDMNSDKS 387
+ ++ D ID L LA++ E+ + +I L+ +D SL++ D++
Sbjct: 557 LIIFKYPDYIDTYLRLAAIAKEKNNLQLSIELIGDALKIDDKYPNALSMLGSLELQGDET 616
Query: 388 NPWWLNEK 395
WL K
Sbjct: 617 ---WLTAK 621
>gi|409076266|gb|EKM76639.1| hypothetical protein AGABI1DRAFT_122552 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1021
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS V M+G+ + + +AI +++EV+R+ P ++ L + + + A
Sbjct: 123 LSQQVQAMIGQGNQAFVDNITPEAIRIMQEVIRIEPRATAAWSVLANCYEDMNQGERALQ 182
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
++AAHL D+ W L + G QA+Y R+A +P ++ AS I
Sbjct: 183 IRIMAAHLR-HDAEEWDGLARQSRDLGYNQQALYCYRKAYSLDPTNVDALWDRASLAKNI 241
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE----YLKVHP 201
G+++ A ++ I K FP ++ + + ++ + A + ++ Y K++P
Sbjct: 242 GEFKTARNAFFAILKRFPHDLSVLRELHTILIELSELAACAELFQQAFDHYQKLYP 297
>gi|282898924|ref|ZP_06306907.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii
CS-505]
gi|281196178|gb|EFA71092.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii
CS-505]
Length = 862
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS----A 103
G++++A + + ++++P+ T N+ G A + G++K A + + + ++P D+ +
Sbjct: 22 GDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNS 81
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
WK L GD +A ++++ P + + GDY+KA E +E+
Sbjct: 82 YWKAL----ADSGDYKKACEIFERSLQINPDNTITLTSYGKALADSGDYKKACEIFERSL 137
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
++ PDN + + G ++ I E L+++P D
Sbjct: 138 QINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDT 178
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS----A 103
G++++A + + ++++P+ T + G A + G++K A + + + ++P ++ +
Sbjct: 226 GDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLTS 285
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
WK L GD +A ++++ P D + GDY+KA E +E+
Sbjct: 286 YWKAL----ADSGDYKKACEIFERSLQINPDDTITLTGYGKALADSGDYKKACEIFERSL 341
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
++ PD+ + + G ++ I E L+++P D
Sbjct: 342 QINPDDTITLTSYGKALADSGDYKKACEIFERSLQINPDDT 382
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 71/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++A + + ++++P+ T N+ G A + ++K A + + + ++P ++
Sbjct: 158 GDYKKACEIFERSLQINPDDTITLNSYGKALADSDDYKKACEIFERSLQINPDNTITLNS 217
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD +A ++++ P D + GDY+KA E +E+ ++ P
Sbjct: 218 YGKALADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIFERSLQINP 277
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
DN + + G ++ I E L+++P D
Sbjct: 278 DNTITLTSYWKALADSGDYKKACEIFERSLQINPDDT 314
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++++A + + ++++P+ T N+ G A + G++K A + + + ++P D+
Sbjct: 193 DYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLTSY 252
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY---VEIGDYEKAAESYEQIQKL 165
GD +A ++++ P + I L S++ + GDY+KA E +E+ ++
Sbjct: 253 GKALADSGDYKKACEIFERSLQINPDNT---ITLTSYWKALADSGDYKKACEIFERSLQI 309
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
PD+ + G ++ I E L+++P D
Sbjct: 310 NPDDTITLTGYGKALADSGDYKKACEIFERSLQINPDDT 348
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 70/157 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++A + + ++++P+ T + G A + G++K A + + + ++P ++
Sbjct: 90 GDYKKACEIFERSLQINPDNTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLNS 149
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD +A ++++ P D + DY+KA E +E+ ++ P
Sbjct: 150 YGKALADSGDYKKACEIFERSLQINPDDTITLNSYGKALADSDDYKKACEIFERSLQINP 209
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
DN + + G ++ I E L+++P D
Sbjct: 210 DNTITLNSYGKALADSGDYKKACEIFERSLQINPDDT 246
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/157 (18%), Positives = 71/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++A + + ++++P+ T N+ G A + G++K A + + + ++P D+
Sbjct: 124 GDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNS 183
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
D +A ++++ P + + GDY+KA E +E+ ++ P
Sbjct: 184 YGKALADSDDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINP 243
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ + + G ++ I E L+++P +
Sbjct: 244 DDTITLTSYGKALADSGDYKKACEIFERSLQINPDNT 280
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/184 (18%), Positives = 78/184 (42%), Gaps = 3/184 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++A + + ++++P+ T + A + G++K A + + + ++P D+
Sbjct: 260 GDYKKACEIFERSLQINPDNTITLTSYWKALADSGDYKKACEIFERSLQINPDDTITLTG 319
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD +A ++++ P D + GDY+KA E +E+ ++ P
Sbjct: 320 YGKALADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIFERSLQINP 379
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D+ + + G ++ I E L++ P D + + L + Y+ +
Sbjct: 380 DDTITLTSYGKALADSGDYKKACEIFERSLQIQP---DNYIFFIFAKCLEQLGRYKDAIT 436
Query: 228 HIEH 231
IE
Sbjct: 437 QIEQ 440
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 61 VRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQ 120
++++P+ N+ G A + G++K A + + + ++P ++ GD +
Sbjct: 1 MQINPDNTIALNSYGKALADSGDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKK 60
Query: 121 AMYYIRQAIRAEPKDISLRIHLASFY---VEIGDYEKAAESYEQIQKLFPDNVDATKTGA 177
A ++++ P D I L S++ + GDY+KA E +E+ ++ PDN +
Sbjct: 61 ACEIFERSLQINPDDT---ITLNSYWKALADSGDYKKACEIFERSLQINPDNTITLTSYG 117
Query: 178 QLFLKCGQTARSIGILEEYLKVHPSDA 204
+ G ++ I E L+++P +
Sbjct: 118 KALADSGDYKKACEIFERSLQINPDNT 144
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/157 (17%), Positives = 70/157 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++A + + ++++P+ T N+ A + G++K A + + + ++P ++
Sbjct: 56 GDYKKACEIFERSLQINPDDTITLNSYWKALADSGDYKKACEIFERSLQINPDNTITLTS 115
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD +A ++++ P + + GDY+KA E +E+ ++ P
Sbjct: 116 YGKALADSGDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINP 175
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ + + ++ I E L+++P +
Sbjct: 176 DDTITLNSYGKALADSDDYKKACEIFERSLQINPDNT 212
>gi|51783969|ref|NP_001001725.1| intraflagellar transport protein 88 homolog [Danio rerio]
gi|45479854|gb|AAS66768.1| Ift88 [Danio rerio]
Length = 824
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 66/133 (49%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L ++ ++P + LG + G+ AF +Y + P + ++ + L +
Sbjct: 571 QAIEWLMQLTSVTPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS Y G+Y+KA E+Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDMG 703
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 42/238 (17%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +P ++ + + + ++E+A KE +R + E LGL + LG +
Sbjct: 479 SADRYNPAA--LINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLE 536
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A D ++ + + + QL D QA+ ++ Q P D + L
Sbjct: 537 EALDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDL 596
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y GD +A + Y + + FP N+
Sbjct: 597 YDNEGDKSQAFQYYYESYRYFPSNI----------------------------------- 621
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
SVI+ L A ++ EK +Q+ E A +++ + +K ++ CY R GN +KA
Sbjct: 622 -SVIEWLGAYYIDTQFCEKAIQYFERATLIQPT----QVKWQLMVASCYRRSGNYQKA 674
>gi|217980135|ref|YP_002364185.1| Tetratricopeptide TPR_2 repeat protein [Thauera sp. MZ1T]
gi|217508306|gb|ACK55091.1| Tetratricopeptide TPR_2 repeat protein [Thauera sp. MZ1T]
Length = 359
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 37 MLGEASLQYAYG-------NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
ML +A + Y++G +A++ L+ V L P + LG+A + G A D
Sbjct: 96 MLDDAEIAYSHGLCLSELRRPAEAVAPLQRAVELDPTHANAFIALGVAFARTGRADEAAD 155
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
A L P+++ + L ++ G TA+A+ + RQA P D ++ LA E+
Sbjct: 156 ALRDAVKLEPENAFAKRNLAAVLMRSGRTAEALPFFRQAASLAPADPGAQLGLAQCLEEL 215
Query: 150 GD--YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
G ++AAE Y+ + K FP++ A + + + GQ
Sbjct: 216 GPSHVKEAAEQYKAVVKRFPEH-QAGEMAEEALTRIGQ 252
>gi|156341942|ref|XP_001620825.1| hypothetical protein NEMVEDRAFT_v1g222670 [Nematostella vectensis]
gi|156206191|gb|EDO28725.1| predicted protein [Nematostella vectensis]
Length = 1459
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 148/355 (41%), Gaps = 58/355 (16%)
Query: 48 GNFEQAISLLKEVVRL------SPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD 101
GN+E+A+ ++ +++ + ++GL +LGN++ A +Y A +
Sbjct: 146 GNYEEAMKYCQQALQVYISTGNESKQADVRQSIGLVQQSLGNYEEAIKYYQQALQVFIAL 205
Query: 102 SAL--WKQLLTFAVQKGDTA--------------------QAMYYIRQAIRA------EP 133
A+ ++Q L G+ + +AM Y +QA++ E
Sbjct: 206 EAMKYYQQALQVFESTGNESKQADVRQNIGLVQDSLGNYEEAMKYYQQALQVFERTGNES 265
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
+ +R+++ +G+YE+A + Y+Q ++F + ++ A + G +S+G
Sbjct: 266 EQAGVRLNIGGVQQRLGNYEEAMKYYQQALQVFERTGNESEQ-AGVRHNIGVVQQSLGNY 324
Query: 194 EEYLKVHP----------SDADLSVIDLLVAILMEN-NAYEKTLQHIEHA-QIVRFSGKE 241
EE +K + +++ + + + ++ ++ YE+ +++ + A Q+ +G E
Sbjct: 325 EEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYEEAMKYYQQALQVFERTGNE 384
Query: 242 L-PLKLKVKAGICYLRLGNMEKAEILFADL-----QWKNAIDHADLITEVADTLMSLGHS 295
+++ G RLGN E+A F + N D A + + LG+
Sbjct: 385 SDQADVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNESDQAGVRMNIGGVQQRLGNY 444
Query: 296 NSALKYYH-----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
A+KYY F T +D + L + L A+ ++ +AL FE
Sbjct: 445 EEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQRRLDNYEEAMKYYQQALQVFE 499
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 155/383 (40%), Gaps = 62/383 (16%)
Query: 48 GNFEQAISLLKEVVRL------SPNLPETYNTLGLAHSALGNHKSAFDFY------VIAA 95
GN+E+A+ ++ +++ + ++GL +LGN++ A +Y I+
Sbjct: 66 GNYEEAMKYCQQALQVYISTGNESKQADVRQSIGLVQQSLGNYEEAIKYYQQALQVYIST 125
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA------EPKDISLRIHLASFYVEI 149
K + + + G+ +AM Y +QA++ E K +R + +
Sbjct: 126 GNESKQAGVRLNIGAVYQSLGNYEEAMKYCQQALQVYISTGNESKQADVRQSIGLVQQSL 185
Query: 150 GDYEKAAESYEQIQKLFP--DNVDATKTGAQLFLKCGQTAR-------------SIGILE 194
G+YE+A + Y+Q ++F + + + Q+F G ++ S+G E
Sbjct: 186 GNYEEAIKYYQQALQVFIALEAMKYYQQALQVFESTGNESKQADVRQNIGLVQDSLGNYE 245
Query: 195 EYLKVHP----------SDADLSVIDLLVAILMEN-NAYEKTLQHIEHA-QIVRFSGKEL 242
E +K + ++++ + + L + + + YE+ +++ + A Q+ +G E
Sbjct: 246 EAMKYYQQALQVFERTGNESEQAGVRLNIGGVQQRLGNYEEAMKYYQQALQVFERTGNES 305
Query: 243 P-LKLKVKAGICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSN 296
++ G+ LGN E+A + L + N AD+ + SLG+
Sbjct: 306 EQAGVRHNIGVVQQSLGNYEEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYE 365
Query: 297 SALKYYH-----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE------ 345
A+KYY F T +D + L + L A+ +F +AL FE
Sbjct: 366 EAMKYYQQALQVFERTGNESDQADVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNES 425
Query: 346 DNIDARLTLASLLLEEAKEEEAI 368
D R+ + + EEA+
Sbjct: 426 DQAGVRMNIGGVQQRLGNYEEAM 448
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 134/337 (39%), Gaps = 57/337 (16%)
Query: 33 GVTKMLG--EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
GV + LG E +++Y F+QA+ + + S N +G LGN++ A +
Sbjct: 556 GVQQRLGNYEEAMKY----FQQALQVFERTGNESDQAGARMN-IGGVQQRLGNYEEAMKY 610
Query: 91 YVIAAHLSPKDSALWKQ----LLTFAVQK--GDTAQAMYYIRQAIRA------EPKDISL 138
Y A + + Q L VQ+ G+ +AM Y +QA++ E K ++
Sbjct: 611 YQQALQVFERTGNESDQAGVRLNIGGVQQSLGNYEEAMKYYQQALQVYERTGNESKQANV 670
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
R ++ +G+YE+A + Y+Q+ ++F + + A + G +S+G EE +K
Sbjct: 671 RHNIGVVQQSLGNYEEAMKYYQQVLQVFERTGNESDQ-ADVRHNIGVVQQSLGNYEEAMK 729
Query: 199 VHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLG 258
Y++ LQ E R + ++ G+ LG
Sbjct: 730 Y----------------------YQQALQVFE-----RTGNESKQANVRHNIGVVQQSLG 762
Query: 259 NMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH-----FLETN 308
N E+A + L + N D AD+ + SLG+ A+KYY F T
Sbjct: 763 NYEEAMKYYQQALQVFERTGNESDQADVRNNIGVVQQSLGNYEEAMKYYQQALQVFERTG 822
Query: 309 AGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
+ +Y + Y + A F K+ + FE
Sbjct: 823 NESAKAGVYNSIGSMYRKKQNYLDAESHFTKSFELFE 859
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 147/350 (42%), Gaps = 43/350 (12%)
Query: 33 GVTKMLG--EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
GV + LG E +++Y F+QA+ + + S N +G LGN++ A +
Sbjct: 396 GVQQRLGNYEEAMKY----FQQALQVFERTGNESDQAGVRMN-IGGVQQRLGNYEEAMKY 450
Query: 91 YVIAAHLSPKDSALWKQ----LLTFAVQK--GDTAQAMYYIRQAIRA------EPKDISL 138
Y A + + Q L VQ+ + +AM Y +QA++ E K +
Sbjct: 451 YQQALQVFERTGNESDQAGVRLNIGGVQRRLDNYEEAMKYYQQALQVFERTGNESKQADV 510
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
R ++ +G+YE+A + Y+Q +++ + +K A + L G + +G EE +K
Sbjct: 511 RHNIGVVQQSLGNYEEAMKYYQQALQVYERTGNESKQ-ANVRLNIGGVQQRLGNYEEAMK 569
Query: 199 VHP----------SDADLSVIDLLVAILMEN-NAYEKTLQHIEHA-QIVRFSGKEL-PLK 245
+++D + + + + + YE+ +++ + A Q+ +G E
Sbjct: 570 YFQQALQVFERTGNESDQAGARMNIGGVQQRLGNYEEAMKYYQQALQVFERTGNESDQAG 629
Query: 246 LKVKAGICYLRLGNMEKA-----EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALK 300
+++ G LGN E+A + L + N A++ + SLG+ A+K
Sbjct: 630 VRLNIGGVQQSLGNYEEAMKYYQQALQVYERTGNESKQANVRHNIGVVQQSLGNYEEAMK 689
Query: 301 YYH-----FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
YY F T +D + + SL A+ ++ +AL FE
Sbjct: 690 YYQQVLQVFERTGNESDQADVRHNIGVVQQSLGNYEEAMKYYQQALQVFE 739
>gi|386813873|ref|ZP_10101097.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403370|dbj|GAB63978.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 576
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L Y G+ E++I+ K + N P+ YN LG+A A N K A D + L P +
Sbjct: 237 LYYQQGDLEESIAEHKAALLSDQNYPDAYNNLGIALYAKNNTKDAIDAFKKTLELQPDFA 296
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
+ L ++ T A+ + QAI+ PK L Y + E+A Y++
Sbjct: 297 EAYFNLGLIYSEENKTKDAVSSLEQAIKLNPKIAEAHFTLGEIYTKNDMQEEALSEYKKA 356
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
PD +A A+L G RSI + ++++P++ D
Sbjct: 357 IDSKPDYAEAYYNYAELNATKGMHDRSIAAWSKTIELNPNNTD 399
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 34/174 (19%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L G +++I+ + + L+PN + Y LG+A+ G+ A ++ ++P
Sbjct: 371 AELNATKGMHDRSIAAWSKTIELNPNNTDAYFNLGIAYYNQGDLDKAISLWIKVIEINPN 430
Query: 101 D----------------------------------SALWKQLLTFAVQKGDTAQAMYYIR 126
D + L+ +L +K A+
Sbjct: 431 DYDALINLADAYNAKGLLDKTIQTWEKITEVYPNHAGLYYKLGNAYAKKNMYNTALVQWE 490
Query: 127 QAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLF 180
+AI +P ++ +L Y +IG ++ A E+Y+++ + D++DA + L+
Sbjct: 491 KAIEIDPNLVNAYYNLGLTYQKIGKWDDAIEAYKKVLDINADDIDAHRNLGLLY 544
>gi|293334567|ref|NP_001167956.1| uncharacterized protein LOC100381672 [Zea mays]
gi|223945123|gb|ACN26645.1| unknown [Zea mays]
Length = 1009
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y N++ I+ +E + + P+ E Y + A G+ A +Y+ A L P
Sbjct: 126 GAIYYQIRNYDMCIAKNEEALAIDPHFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPN 185
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
W L + +KG +A RQA+ P+ + +L + G ++A Y
Sbjct: 186 FCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYI 245
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--LSVIDLLVAILME 218
+ ++ P A A LF++ G +++ +E +K+ PS AD L+ ++ A+ M
Sbjct: 246 EALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMP 305
Query: 219 NNA---YEKTLQ 227
+A Y++ LQ
Sbjct: 306 QDAIMCYQRALQ 317
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 69/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + ++P L + ++ LG A G + A+ Y+ A + P + W
Sbjct: 201 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSN 260
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P ++ + Y +G + A Y++ + P
Sbjct: 261 LAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCYQRALQARP 320
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D A A ++ + GQ +I + + P
Sbjct: 321 DYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDP 354
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + + L N P+ LG + +A FY A ++ S+
Sbjct: 371 GRVEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNN 430
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + + EIG +A + Y Q + P
Sbjct: 431 LAVIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRP 490
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ +A A + G +I ++ L++ P
Sbjct: 491 NMPEAHANLASAYKDSGHVETAIISYKQALRLRP 524
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++A+ KE V+L P+ + Y G + ALG + A Y A P + +
Sbjct: 269 GDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCYQRALQARPDYAMAYGN 328
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T ++G A+ QAI +P+ I ++ + + G E+A Y L
Sbjct: 329 LATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQA 388
Query: 168 DNVDATKTGAQLFLK 182
++ A ++++
Sbjct: 389 NHPQALTNLGNIYME 403
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 82/228 (35%), Gaps = 13/228 (5%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
+ L A Y G + +A+ V +P + LG + + N+ A
Sbjct: 87 RHLALAHQNYRSGKYREALEHGNVVYEKNPRRTDNLLLLGAIYYQIRNYDMCIAKNEEAL 146
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ P + + + +KGD A+ Y AI+ P +LAS Y G +A
Sbjct: 147 AIDPHFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLNEA 206
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
A+ Q + P VDA L G + E L++ P A L +
Sbjct: 207 AQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFA--IAWSNLAGL 264
Query: 216 LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
ME +K L + + A +KLK YL GN+ KA
Sbjct: 265 FMEAGDLDKALMYYKEA-----------VKLKPSFADAYLNQGNVYKA 301
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS-ALWKQLLTF 111
A S K + ++ L N L + + GN+ A Y + P + AL + TF
Sbjct: 410 ATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTF 469
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ G +A+ QA P +LAS Y + G E A SY+Q +L PD +
Sbjct: 470 K-EIGRVNEAIQDYVQAATIRPNMPEAHANLASAYKDSGHVETAIISYKQALRLRPDFPE 528
Query: 172 AT 173
AT
Sbjct: 529 AT 530
>gi|390958719|ref|YP_006422476.1| hypothetical protein Terro_2906 [Terriglobus roseus DSM 18391]
gi|390413637|gb|AFL89141.1| tetratricopeptide repeat protein [Terriglobus roseus DSM 18391]
Length = 474
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
+K + + T L AS Y G++ +A +L++++ +P E + LGLA++A
Sbjct: 27 AKTRSNDTATAELRAASAAYDKGDYREASVVLEKIIVKAPRNFEAHEMLGLAYAAQSRTP 86
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A +A L+P + L T V G A ++A+ + + HLA
Sbjct: 87 DALKQLRLAVALNPASALAHANLATSLVHAGQPEAAEPEYKRALELDRTNYDAARHLAGL 146
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
Y++ G + A + QKL PD+ D A +L GQ S + E L+ PS
Sbjct: 147 YLQSGRIDSAIPLLQTAQKLHPDDYDTGYDLALAYLMSGQVVASQRLTETLLRKRPS 203
>gi|288560424|ref|YP_003423910.1| serine/threonine protein kinase with TPR repeats
[Methanobrevibacter ruminantium M1]
gi|288543134|gb|ADC47018.1| serine/threonine protein kinase with TPR repeats
[Methanobrevibacter ruminantium M1]
Length = 775
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 116 GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKT 175
GD + +AI P +RI+ A ++ G Y++A +K+F +N +
Sbjct: 319 GDIENFISNYDKAIELNPNSSDIRINYAINLIKYGYYDEALNHLNLAKKIFDENNKNFVS 378
Query: 176 GAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL-----LVAILMENNAYEKTLQHIE 230
+L+ G +S G L + ++ + + +++ L L I E YEK L+ +
Sbjct: 379 LDRLYFNFGHAYQSKGYLNKAIENYENAIEINENYLESYVNLGNIYKELELYEKALEKYQ 438
Query: 231 HAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLM 290
A + + L + G Y LGN E +E F +++N + DL + ++L
Sbjct: 439 LALDIN---PNFFMAL-INMGEAYSFLGNYEDSENCFYKAKYQNI--NEDLYSLWGESLR 492
Query: 291 SLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNID 349
L AL K++ L+ N ++ Y Y + YL L A +F KALD F DNI
Sbjct: 493 RLNREPYALTKFFEILKIN--DESMYAYYNITISYLILDNLDQAKEYFGKALDLFGDNIT 550
Query: 350 ARLTLASLLLEEAKEEEAITLLS 372
+L L+ + +EE++ +L
Sbjct: 551 YKLDLSKQFFKYGFQEESLEILD 573
>gi|298714026|emb|CBJ27258.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1076
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
+ +N + KT ++ + G+ P + LG A + Y G +A + L EVV
Sbjct: 63 DFVNRRAKKPKTGRIGRTAGK------NYPPEIQAALGRARMLYVKGKVVEASTELSEVV 116
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
++PE Y L + + G H+ A FY +A K+ +++ A GD
Sbjct: 117 IQCSSIPEPYALLAMIYQDGGKHEEALMFYKLACARDTKNWGNHQEVARIAGILGDHTSR 176
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ ++ R P D+++ I A +E+ ++A + Y + K FP +D
Sbjct: 177 LEALKVLARLRPNDLNVAIERARCLLELQKSKQALDVYAKAAKRFPRKLD 226
>gi|427716370|ref|YP_007064364.1| hypothetical protein Cal7507_1054 [Calothrix sp. PCC 7507]
gi|427348806|gb|AFY31530.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 517
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++ AI+ + ++++PN + YN GL+H LG++++A D Y A ++P + +K
Sbjct: 272 DYAGAIADYNQAIKINPNNAKAYNKRGLSHYQLGDYEAAIDDYNQAIRINPHVAVNFKNR 331
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEP-----------------------KDISLRIHLASF 145
Q GD A+ QAI+ P K I L H A
Sbjct: 332 ADARSQLGDNQGAIEDYTQAIKINPNYAIVDTNGSISRYLLTNQQKFTKAIKLNPHDAVA 391
Query: 146 Y-------VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
Y ++GDYE A Y Q+ K+ P+ +DA + CG +G E
Sbjct: 392 YKNRADARYDLGDYEGAIADYIQVIKINPNYIDA-------YYNCGNARYDLGDYE 440
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 33/176 (18%)
Query: 29 KLSPGVTKMLGEASL-QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K++P K + L Y G++E AI + +R++P++ + A S LG+++ A
Sbjct: 285 KINPNNAKAYNKRGLSHYQLGDYEAAIDDYNQAIRINPHVAVNFKNRADARSQLGDNQGA 344
Query: 88 FDFYVIAAHLSPK------DSALWKQLLTF--------------AVQKGDTAQAMY---- 123
+ Y A ++P + ++ + LLT AV + A A Y
Sbjct: 345 IEDYTQAIKINPNYAIVDTNGSISRYLLTNQQKFTKAIKLNPHDAVAYKNRADARYDLGD 404
Query: 124 -------YIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
YI Q I+ P I + + ++GDYE A SY Q+ K+ + +DA
Sbjct: 405 YEGAIADYI-QVIKINPNYIDAYYNCGNARYDLGDYEGAIASYTQVIKINANYIDA 459
>gi|120586927|ref|YP_961272.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
gi|120564341|gb|ABM30084.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
Length = 886
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 5/191 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS Q A G+ A + + L P L A G A + A +P
Sbjct: 372 ASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRLKQADGRPDEALEDLKAAVVAAPD 431
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D A+ L + + +GDT + + + + +R P+D L L YV +GD KA ++
Sbjct: 432 DLAVRNALFAYHLGRGDTGKGVQVVLEGLRGTPQDAILYTMLVPVYVNMGDEAKALDAVA 491
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD-----ADLSVIDLLVAI 215
Q + PD DA G +L G+ +++ E YL P A +++DLL
Sbjct: 492 QAHRADPDFPDAYLAGLRLHAGAGRAEQALAESEAYLARKPDAPGFLLASGALLDLLGRT 551
Query: 216 LMENNAYEKTL 226
+ ++K L
Sbjct: 552 AEADARFDKAL 562
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 116/314 (36%), Gaps = 42/314 (13%)
Query: 21 GRRKGSKNKLSPG-------VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNT 73
G R G++ G V +L + L+ A G ++A+ LK V +P+ N
Sbjct: 379 GDRAGAERSFEAGLALQPAHVPALLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNA 438
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
L H G+ + +P+D+ L+ L+ V GD A+A+ + QA RA+P
Sbjct: 439 LFAYHLGRGDTGKGVQVVLEGLRGTPQDAILYTMLVPVYVNMGDEAKALDAVAQAHRADP 498
Query: 134 KD-----ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
LR+H + G E+A E PD L G+TA
Sbjct: 499 DFPDAYLAGLRLHAGA-----GRAEQALAESEAYLARKPDAPGFLLASGALLDLLGRTAE 553
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNA---YEKTLQHIEHAQIVRFSGKELPLK 245
+ ++ L + +V + VA + A E+ L+ +H Q
Sbjct: 554 ADARFDKALAANDPRVSFAVAERAVASGQDEKARSVLEEALR--QHDQTT---------- 601
Query: 246 LKVKAGICYLRLGNMEKAEILFADLQWKNA----------IDHADLITEVADTLMSLGHS 295
L+ I R+G + A L+ ++ + + H D E ADT LG
Sbjct: 602 LRDALAIQLARMGKPDDALALYTAIETQRPREALLGRYRLLTHLDRHQEAADTARELGRR 661
Query: 296 NSALKYYHFLETNA 309
SA LE A
Sbjct: 662 ESASPLPVLLEAAA 675
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++ A SL + V + P+L E Y LG+A G+ ++A + +P+ A +
Sbjct: 279 DYTLAASLFQRSVAMRPSL-EGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMT 337
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+T + + A+A ++ + P D + LAS + GD A S+E L P
Sbjct: 338 VTILLAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPA 397
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
+V A ++L G+ ++ L+ + P DL+V + L A + K +Q
Sbjct: 398 HVPALLQLSRLKQADGRPDEALEDLKAAVVAAPD--DLAVRNALFAYHLGRGDTGKGVQV 455
Query: 229 I 229
+
Sbjct: 456 V 456
>gi|75910999|ref|YP_325295.1| hypothetical protein Ava_4803 [Anabaena variabilis ATCC 29413]
gi|75704724|gb|ABA24400.1| Tetratricopeptide TPR_3 [Anabaena variabilis ATCC 29413]
Length = 340
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A+ E +RL+PNL ETY LGLA G + A Y A + P+ + L
Sbjct: 74 AVQEYGEAIRLNPNLGETYYNLGLALQQQGKKEGAITAYRQALVIDPRRVEAYYNLGLVL 133
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
++G +A+ + AI EP ++ +LA + G E+A +Y ++ KL P N A
Sbjct: 134 YEQGLLQEAIAAYQDAINLEPSKVNAHHNLAIALQQTGKMEEAIVAYREVLKLDPQNAAA 193
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
L G+ +I + ++ P +A
Sbjct: 194 YSNLGSLMAMQGRPEEAIAAYTQAVRQDPKNA 225
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G ++AI+ ++ + L P+ ++ L +A G + A Y L P+++A
Sbjct: 134 YEQGLLQEAIAAYQDAINLEPSKVNAHHNLAIALQQTGKMEEAIVAYREVLKLDPQNAAA 193
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L + +G +A+ QA+R +PK+ +L GD +KA+ ++++ Q+
Sbjct: 194 YSNLGSLMAMQGRPEEAIAAYTQAVRQDPKNALAYYNLGITLYNQGDLQKASNAFKRAQE 253
Query: 165 LFPD--NVDATKTGAQLFLKCGQ 185
+ N++ T+ QL + Q
Sbjct: 254 EYSQQGNLEQTEKTEQLMQQVAQ 276
>gi|302765547|ref|XP_002966194.1| peptide-N-acetylglucosaminyltransferase [Selaginella
moellendorffii]
gi|300165614|gb|EFJ32221.1| peptide-N-acetylglucosaminyltransferase [Selaginella
moellendorffii]
Length = 985
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 7/199 (3%)
Query: 7 GGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPN 66
G Y++ + N R + V +LG ++ Y +F+ I+ +E +R+ P
Sbjct: 74 GNYKQALKHCNVVHERSSKRTD-----VLLLLG--AIYYQLHDFDMCIAKNEEALRIDPQ 126
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
E Y + A GN A +Y++A L P W L + ++KG +A R
Sbjct: 127 FAECYGNMANAFKEKGNVDLAIQYYLVAIELRPGFCDAWSNLASAYMRKGRLQEAAACCR 186
Query: 127 QAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
A+ P+ + +L + G A Y + ++ P A A L ++ G
Sbjct: 187 HALTLNPRLVDAHSNLGNLLKAQGLAPHAYYCYAEAIRIQPTFAIAWSNLAGLLMEAGDY 246
Query: 187 ARSIGILEEYLKVHPSDAD 205
R++ +E +++ P+ AD
Sbjct: 247 ERALAYYQEAIRLKPNFAD 265
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L PG AS G ++A + + + L+P L + ++ LG A G A
Sbjct: 156 ELRPGFCDAWSNLASAYMRKGRLQEAAACCRHALTLNPRLVDAHSNLGNLLKAQGLAPHA 215
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ Y A + P + W L ++ GD +A+ Y ++AIR +P ++L +
Sbjct: 216 YYCYAEAIRIQPTFAIAWSNLAGLLMEAGDYERALAYYQEAIRLKPNFADAHLNLGNALK 275
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+G +++ Y + +L PD A A ++ + GQ ++I
Sbjct: 276 NLGKAQESIVCYLRAIQLRPDYAIAYGNLASVYYEQGQLDQAI 318
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L G++E+A++ +E +RL PN + + LG A LG + + Y+ A L P
Sbjct: 237 AGLLMEAGDYERALAYYQEAIRLKPNFADAHLNLGNALKNLGKAQESIVCYLRAIQLRPD 296
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + L + ++G QA+ + +AI + I +L + + G ++A Y+
Sbjct: 297 YAIAYGNLASVYYEQGQLDQAILHYHKAIMLDSSFIEAYNNLGNALKDAGRVDEAIACYQ 356
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
L ++ A ++++ + + + L V
Sbjct: 357 HCLTLQANHPQALTNLGNIYMEWNMISMAANFYKATLNV 395
>gi|190338004|gb|AAI62512.1| Intraflagellar transport 88 homolog [Danio rerio]
Length = 824
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 66/133 (49%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L ++ ++P + LG + G+ AF +Y + P + ++ + L +
Sbjct: 571 QAIEWLMQLTSVTPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS Y G+Y+KA E+Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDMG 703
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 42/238 (17%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +P ++ + + + ++E+A KE +R + E LGL + LG +
Sbjct: 479 SADRYNPAA--LINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLE 536
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A D ++ + + + QL D QA+ ++ Q P D + L
Sbjct: 537 EALDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDL 596
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y GD +A + Y + + FP N+
Sbjct: 597 YDNEGDKSQAFQYYYESYRYFPSNI----------------------------------- 621
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
SVI+ L A ++ EK +Q+ E A +++ + +K ++ CY R GN +KA
Sbjct: 622 -SVIEWLGAYYIDTQFCEKAIQYFERATLIQPT----QVKWQLMVASCYRRSGNYQKA 674
>gi|427706849|ref|YP_007049226.1| hypothetical protein Nos7107_1433 [Nostoc sp. PCC 7107]
gi|427359354|gb|AFY42076.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 226
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 88/188 (46%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
+P + ++ E Q G+++ AI+ + L P + ++ +G ++ GN+++A
Sbjct: 36 NPELKELFEEGRRQVDAGDYDSAIATYQRAAALDPKNAKVHSGMGYLYAQQGNYQAALVA 95
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y A L P +S + + GDT + R+AI+ +I+ + L +G
Sbjct: 96 YRRALGLDPNNSDFFYAVGYIKANLGDTKGSRDAYRRAIQLNRNNINAYLGLGVTQARLG 155
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
DYE A +YEQ + +N + A +F + QT ++ +L++ ++ ++ +
Sbjct: 156 DYEAANWAYEQAIGIDRNNPQIYEFMAAMFKQRRQTKQANSLLQKARSLYQRQNNVDGVA 215
Query: 211 LLVAILME 218
+ A+L E
Sbjct: 216 RVEAMLQE 223
>gi|26338035|dbj|BAC32703.1| unnamed protein product [Mus musculus]
Length = 604
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 287 EEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAV 346
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ KA E Y + K+
Sbjct: 347 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAE 406
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS +L + + ++A++ + EK HI
Sbjct: 407 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHI 465
>gi|34762144|ref|ZP_00143152.1| O-LINKED GLCNAC TRANSFERASE [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27888221|gb|EAA25279.1| O-LINKED GLCNAC TRANSFERASE [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 800
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 136/334 (40%), Gaps = 32/334 (9%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
YG++ +A LLK ++ S N Y+ LG + G + A + Y A L+ D+ ++
Sbjct: 160 YGHYTEAEELLKNMINKSKNDEWLYSELGYCLAEQGRQEEALESYFKAIELNRNDAWIFT 219
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
++ +A+ Y +A+ + DI + LA Y +G++EKA + E++++L
Sbjct: 220 RIGMCYKNMDKKEEAIEYYLKALELKEDDIFIMSDLAWLYDSLGEFEKALKYLERLEELG 279
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-NAYEKT 225
++ K + +I + L+ D D + I + + Y++
Sbjct: 280 ENDAWTNTEYGYCLSKLKRFDEAIVKINRALEAEDDDKDTAYIYSQLGWCKRHLEKYDEA 339
Query: 226 LQHIEHAQIVRFSGKELPLKL---------KVKAGICYLRLGNMEKAEI-LFADLQW--- 272
++ A+ + + ++L + KA YL+ +K +I L +D+ W
Sbjct: 340 IKAFSQAKKWGRNDAWINIELGHCYKAKDERQKALDFYLKAEKFDKNDIYLLSDIAWHYD 399
Query: 273 ------------KNAI----DHADLITEVADTLMSLGHSNSALKYYHFLET--NAGTDNG 314
K A+ D A + E L LG A+K Y + G D
Sbjct: 400 AMDKNQEALKYIKRAVKLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALNLDEEGKDER 459
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNI 348
Y+ +L CY L E AI + KA + D+I
Sbjct: 460 YINSQLGWCYRQLGEYKKAIKYHKKAKELGRDDI 493
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 132/368 (35%), Gaps = 70/368 (19%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI + + N LG + A + A DFY+ A D L +
Sbjct: 336 YDEAIKAFSQAKKWGRNDAWINIELGHCYKAKDERQKALDFYLKAEKFDKNDIYLLSDIA 395
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+A+ YI++A++ D + + +G Y++A + YE L +
Sbjct: 396 WHYDAMDKNQEALKYIKRAVKLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALNLDEEG 455
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
D +QL G R +G ++ +K H +L D+ +
Sbjct: 456 KDERYINSQL----GWCYRQLGEYKKAIKYHKKAKELGRDDIWI---------------- 495
Query: 230 EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA--EILFADLQWKNAIDHADLITEVAD 287
V+ G+CY +L EKA L A +D D++
Sbjct: 496 -----------------NVEIGMCYAKLEEYEKAIENYLVA-----YEMDRDDIL----- 528
Query: 288 TLMSLGHSNSALKYY----HFL--ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
TL LG A++ Y FL G D+ +L ++ + I K+L
Sbjct: 529 TLTELGWVYDAMEKYDDAIEFLLKAEKLGRDDEWLNTEIGLNLGRSGKTQEGIERLQKSL 588
Query: 342 DRFEDN-------IDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNE 394
ED+ I++ + LEE EEA+ L+ K+L D WLN
Sbjct: 589 TMVEDDDTEQKIFINSEIGWLYGRLEEPNPEEALKYLNVAKELGRDDE--------WLNS 640
Query: 395 KIIMKLCH 402
++ +L +
Sbjct: 641 ELGFELGY 648
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 130/324 (40%), Gaps = 38/324 (11%)
Query: 45 YAYGNFEQAISLLKEVVRLSPN-------LPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
Y +F+ A L + +L P L ETY +L GNH+ A ++ + A
Sbjct: 80 YFLDDFKNAEKYLLKANKLYPEDNFTCTLLIETYISLSRVEDENGNHEKAMEYALEAKKY 139
Query: 98 SPKD--SALWKQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
D A L++ + G +A ++ I D L L E G E+
Sbjct: 140 VRDDEGEANADSFLSWLYDRYGHYTEAEELLKNMINKSKNDEWLYSELGYCLAEQGRQEE 199
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE----YLK-VHPSDADLSVI 209
A ESY + ++ + A +F + G +++ EE YLK + + D+ ++
Sbjct: 200 ALESYFKA-------IELNRNDAWIFTRIGMCYKNMDKKEEAIEYYLKALELKEDDIFIM 252
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
L + +EK L+++E + + E + G C +L ++A +
Sbjct: 253 SDLAWLYDSLGEFEKALKYLERLEEL----GENDAWTNTEYGYCLSKLKRFDEAIVKI-- 306
Query: 270 LQWKNAIDHADLITEVADTLMSLGHSNSALKYYH-----FLETNA-GTDNGYLYLKLAEC 323
A++ D + A LG L+ Y F + G ++ ++ ++L C
Sbjct: 307 ---NRALEAEDDDKDTAYIYSQLGWCKRHLEKYDEAIKAFSQAKKWGRNDAWINIELGHC 363
Query: 324 YLSLKERAHAIMFFYKALDRFEDN 347
Y + ER A+ F+ KA ++F+ N
Sbjct: 364 YKAKDERQKALDFYLKA-EKFDKN 386
>gi|337287779|ref|YP_004627251.1| hypothetical protein TOPB45_0208 [Thermodesulfobacterium sp. OPB45]
gi|334901517|gb|AEH22323.1| Tetratricopeptide TPR_1 repeat-containing protein
[Thermodesulfobacterium geofontis OPF15]
Length = 252
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 78/193 (40%), Gaps = 40/193 (20%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
S +K P + +LG L Y N + +A LKE +RL PN E YN LG G +
Sbjct: 58 SADKCDPEIYNLLG---LVYMGKNEYLKAEENLKEAIRLDPNFSEAYNNLGSLQMLQGKY 114
Query: 85 KSAFDFYVIAA--------------------HLSPKDSALWKQLLTFA------------ 112
K A +++ A L KD A+ L F
Sbjct: 115 KEAIEYFNKALENPYYVNSFIARTNLGWAYYQLKDKDKAISTLLSAFRENPRYPKTLIYL 174
Query: 113 ----VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ +GD A +Y +QA++ + R +L Y + GD KA E ++ I L PD
Sbjct: 175 GLIYLNEGDLNSAEFYFQQALKLDKTSGEARYYLGEIYFKKGDKTKAEELWQSIIYLSPD 234
Query: 169 NVDATKTGAQLFL 181
+ A K +LFL
Sbjct: 235 SEWANKATQRLFL 247
>gi|338810665|ref|ZP_08622906.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
gi|337277347|gb|EGO65743.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
Length = 329
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G+++ AI+ +V+ L +PETYN+ G+ + G++ A Y A L+PK ++ +
Sbjct: 53 AQGDYDHAIAAYSQVIALQLQVPETYNSRGIVYIKKGDYDRAIADYDQAIALNPKFASAY 112
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
KG QA+ QA+ PK+ + + Y + Y++A Y Q L
Sbjct: 113 NNRGVAYYAKGHYDQAIADHSQAVALNPKNAGAYYNRGNAYGKNDQYDRAIADYTQAIAL 172
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
P +V A L+ K GQ ++I + + + P A
Sbjct: 173 NPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALEPKRA 211
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
YA G+++QAI+ + V L+P Y G A+ + A Y A L+PK A
Sbjct: 120 YAKGHYDQAIADHSQAVALNPKNAGAYYNRGNAYGKNDQYDRAIADYTQAIALNPKHVAA 179
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ +KG QA+ QAI EPK + + Y + G Y +A ++Q
Sbjct: 180 YDNRGMLYKKKGQYDQAIDDHTQAIALEPKRATAYNNRGIAYTKKGQYNRAIADFDQAIL 239
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
L P + A + G R+I + + P
Sbjct: 240 LNPKDAMAYYNRGITYADKGDYTRAIVTYNRAIALDP 276
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 46 AYG---NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
AYG +++AI+ + + L+P Y+ G+ + G + A D + A L PK +
Sbjct: 152 AYGKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALEPKRA 211
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
+ +KG +A+ QAI PKD + Y + GDY +A +Y +
Sbjct: 212 TAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVTYNRA 271
Query: 163 QKLFPDNVDATKTGAQLFLKCGQ 185
L P +A A K G+
Sbjct: 272 IALDPHYAEAYYQKAVACEKAGR 294
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS-ALWK 106
G ++QAI + + L P YN G+A++ G + A + A L+PKD+ A +
Sbjct: 191 GQYDQAIDDHTQAIALEPKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYN 250
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
+ +T+A KGD +A+ +AI +P A + G +AAESY +
Sbjct: 251 RGITYA-DKGDYTRAIVTYNRAIALDPHYAEAYYQKAVACEKAGRLPEAAESYHKF 305
>gi|333993657|ref|YP_004526270.1| putative slei family protein [Treponema azotonutricium ZAS-9]
gi|333734825|gb|AEF80774.1| putative slei family protein [Treponema azotonutricium ZAS-9]
Length = 865
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G E A + + +R P E N LG+ H G H A D + P ++
Sbjct: 188 ANGRLEDAANEYRAALRSKPGWLEPMNNLGIIHFKQGRHDKALDVFNRIIDSDPSNAEAR 247
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ +G +A+ R+AI A+P+ ++L E GD+ A E++ KL
Sbjct: 248 NNMGVIQADQGKNKEAVQNYRRAIEADPRYTKAVVNLERTLEESGDFANAVLELEKLVKL 307
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
PD+ D + L+LK + ++ + L+ P D
Sbjct: 308 TPDSADLRDRLSGLYLKMERYPEALEQAKAALEWAPED 345
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F A+ L+++V+L+P+ + + L + + + A + A +P+D+ +
Sbjct: 292 GDFANAVLELEKLVKLTPDSADLRDRLSGLYLKMERYPEALEQAKAALEWAPEDTQALRV 351
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ +A + + +P + S + LA + + +Y++A + P
Sbjct: 352 LGAVQRITGNDEEAKAAFEKMLAIDPGNYSFHLDLADIHFKRKEYKEAEDCIMAYLARRP 411
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
++ A +L+ + G A ++ + EE K+ P+D + + + E+ + EK L+
Sbjct: 412 NDRTAKLLLGKLYAEMGNKAHAVQVFEELSKIDPNDTE--ALAATAELYKESGSVEKALR 469
Query: 228 HIEHAQIVRFSGK 240
+ +V GK
Sbjct: 470 TAD--ALVNLQGK 480
>gi|443326669|ref|ZP_21055315.1| putative glycosyltransferase [Xenococcus sp. PCC 7305]
gi|442793725|gb|ELS03166.1| putative glycosyltransferase [Xenococcus sp. PCC 7305]
Length = 1493
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 137/356 (38%), Gaps = 49/356 (13%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+ + I + + L P L + Y LG A+ +LG +A +Y A + P + L
Sbjct: 195 WSEVIRACETALGLDPKLAKAYKVLGDANQSLGKFSAAIGYYGQAITIKPDFPEAYANLG 254
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T Q+ QA+ Y ++A+ +P + H+A + +G EKA Q QKL ++
Sbjct: 255 TLYAQQKQWQQALDYYQKALELKPDLAGVYKHVARVWQNLGQPEKAQSILAQAQKL--ES 312
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD-----------LSVIDLLVAILME 218
T+T + G+ A G LE+ LK + L+ I + + E
Sbjct: 313 QSQTQTSPKDLFHLGEQACQQGNLEQALKYYQQAVQLAPNFSQAYQRLAAITEKMGLWQE 372
Query: 219 NNAYEKTLQHIEHAQIVRF---SGKELPLKLKV------KAGICYLRLGNMEKAEILFAD 269
+ Y + L ++ + + + K+L LK ++ K G L AD
Sbjct: 373 STIYYRQLLQLKDSVGISSLPPARKQLSLKQQIAQNYGKKGEGSAFNAGRSPTESTLAAD 432
Query: 270 ---------------LQWKNAIDHADLITE-----------VADTLMSLGHSNSALKYY- 302
QW+ AI H E +A L +G A Y+
Sbjct: 433 SADYQVSQGNLFAQKQQWREAILHYQKAIELNPKLVAAYRNLARILTQIGKIEQATSYWL 492
Query: 303 HFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLL 358
+E +A YL+LA ++ + + A+ + +A+ IDA L L +L
Sbjct: 493 KAVELDAQGLQAGEYLQLANNLVTQGKTSQAVTCYRRAIQLQPTLIDAYLNLGQVL 548
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 102/511 (19%), Positives = 196/511 (38%), Gaps = 114/511 (22%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGE-ASLQYAYGN-------FEQAISLLKEVVRLSPNLPET 70
K+G SP + + + A Q + GN + +AI ++ + L+P L
Sbjct: 411 KKGEGSAFNAGRSPTESTLAADSADYQVSQGNLFAQKQQWREAILHYQKAIELNPKLVAA 470
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPK--DSALWKQLLTFAVQKGDTAQAMYYIRQA 128
Y L + +G + A +++ A L + + + QL V +G T+QA+ R+A
Sbjct: 471 YRNLARILTQIGKIEQATSYWLKAVELDAQGLQAGEYLQLANNLVTQGKTSQAVTCYRRA 530
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD---------ATKTGAQL 179
I+ +P I ++L G+ KA + Y++ K P N + +
Sbjct: 531 IQLQPTLIDAYLNLGQVLTTAGELPKALQCYQEAIKYNPQNHQLYFNLGLCFTQQKNWEQ 590
Query: 180 FLKCGQTA-------------------------RSIGILEEYLKVHPSDADLSVIDLLVA 214
++C Q A +I + +K+ P D S DL +
Sbjct: 591 AVQCYQQALQIKSDYWEALHNLGGVLGNLQLWSEAITVYRRAIKLKP-DVAWSYNDLGL- 648
Query: 215 ILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKN 274
IL++ N E+ + A + LK +LRLG+ L +W +
Sbjct: 649 ILLQVNRPEEAIAVFRKA-----------VSLKPDFAAAHLRLGDA-----LATVSKWSD 692
Query: 275 AI-----------DHADLITEVADTLM--SLGHSNSALKYY-HFLETNAGTDNGY----- 315
AI D +L +++ + S + +AL+++ +E + N Y
Sbjct: 693 AISAYQASGQIQADLPNLSSKLGNVFFQQSEEYRQTALRHFMQAIEQDPDNTNNYHQALA 752
Query: 316 -------LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
LYL+L + K AI+ + A+ N++A + L + L+E+ E +
Sbjct: 753 IDKNNIELYLRLGNRLIEQKNLDEAIVAYQMAVQLQPKNVEATIRLTNALMEKHPETDVK 812
Query: 369 TLLS-----PPKDLD-------SLDMNSDKSNPWWLNEKIIMKLCHIYR----------- 405
L+ P L SLD++++ + P + + ++ + +Y
Sbjct: 813 KLVERLISLPTSTLQQQEDNAHSLDISANITLP-YSDHPVVSIIIPVYNKLDYTIQCLSS 871
Query: 406 -AKGMPEDF-VDAIFPLVCESLCVEALRQKV 434
A +P+D V+ I C + C + + ++V
Sbjct: 872 LANQIPQDIQVEVIVINDCSTDCTQEILEQV 902
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+ +AI + ++L+P L E Y LG A+ +LG A +Y A L P + L
Sbjct: 70 WPEAIRACEAALKLNPELAEAYKVLGDANQSLGEFSKAIGYYGKAIALKPDFPEAYANLG 129
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
+ Q+ QA+ Y ++A+ +P + H+A
Sbjct: 130 SLYAQQSKWQQALDYYQKALEIKPDLAGVYNHIA 163
>gi|118401580|ref|XP_001033110.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287457|gb|EAR85447.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3068
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 152/350 (43%), Gaps = 42/350 (12%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
N +AI K+++ + P + + LG+A+ + + K A + + ++P ++ W+Q
Sbjct: 2697 NNINRAIDCFKQIISIEPKYSKAHFQLGMAYQSRKDFKLAAECFKQCISINPNNADAWQQ 2756
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T + G+T +A+ Y ++ + P D L+ +A+ Y +Y+ A E YE + K
Sbjct: 2757 LGTIFQETGNTEKALMYFQKGLVFNPNDFQLQKGIANCYYFTENYDTAIEKYENLLKNKQ 2816
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D+ +A + A + +I ++ L+++P + + +L A +NN E
Sbjct: 2817 DD-EALQYLADCYYTKDDVENAIYYYKQCLEINPKRPNC-LYNLGNAYCTQNNYEEAQQA 2874
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM-------EKAEILF--------ADLQW 272
+IE ++L Y L N+ E A I F ++++W
Sbjct: 2875 YIE------------CIQLDTTNASAYYNLANVYYIQNDYENALINFELAIEKDPSNVEW 2922
Query: 273 KNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAH 332
+N I A L + ++ H LK Y + GT N KLA+ Y + +
Sbjct: 2923 RNYI--AGLYIDNNQFDKAIQH---LLKAY-----DDGTSNFDTCFKLAQAYYGQQNLSE 2972
Query: 333 AIMFFYKALDRFEDNIDA-RL--TLASLLLEEAKEEEAITLLSPPKDLDS 379
A + A++ DN DA RL L + ++ + + +S KDL+S
Sbjct: 2973 ARQYIKVAVEIDPDNDDAYRLYEELNPAPVNKSNSQNKDSNVSASKDLES 3022
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 49/111 (44%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y + E AI K+ + ++P P LG A+ N++ A Y+ L +++
Sbjct: 2829 YTKDDVENAIYYYKQCLEINPKRPNCLYNLGNAYCTQNNYEEAQQAYIECIQLDTTNASA 2888
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+ L + D A+ AI +P ++ R ++A Y++ ++KA
Sbjct: 2889 YYNLANVYYIQNDYENALINFELAIEKDPSNVEWRNYIAGLYIDNNQFDKA 2939
>gi|313226628|emb|CBY21773.1| unnamed protein product [Oikopleura dioica]
Length = 1054
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ Y G + AI + +RL PN P+ Y L A A Y A L P+
Sbjct: 280 ASVYYEQGRLDLAIETYRIAIRLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPE 339
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L ++ T +AM ++A++A+P + +LAS + G + A E Y+
Sbjct: 340 HADSLNNLANIKREQNRTHEAMELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYK 399
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
Q ++FP DA + + + +I + + ++P+ AD L ++ +
Sbjct: 400 QAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYKSAISINPNFAD--AFSNLASLHKDCG 457
Query: 221 AYEKTLQHIEHAQIVR 236
E+ +Q+ + A VR
Sbjct: 458 NTEEAIQYFDFALRVR 473
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP V +L +S+ + + + +E +R++P L E Y+ LG H G+ + A +F
Sbjct: 68 SPAVLLLL--SSIYFQKRLLDDSAYFSREAIRVNPTLAEAYSNLGNVHKEQGDVQQALEF 125
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y A L P + L D A+ +A++ P +R L + + +G
Sbjct: 126 YKYAVGLKPDFIDGYVNLAAALTSIQDYEGAIKAHMEALQINPNLYGVRSDLGNIFKSLG 185
Query: 151 DYEKAAESYEQ 161
E+A E Y++
Sbjct: 186 RLEEAEECYQK 196
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ G AI K+ +R+ P + Y+ +G + + ++ A Y A ++P
Sbjct: 382 ASILQQQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYKSAISINPN 441
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE---PKDISLRIHLASFYVEIGDY 152
+ + L + G+T +A+ Y A+R P+ R H + + DY
Sbjct: 442 FADAFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARAHCHQYICDWNDY 496
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++E AI E ++++PNL + LG +LG + A + Y A + + + L
Sbjct: 152 DYEGAIKAHMEALQINPNLYGVRSDLGNIFKSLGRLEEAEECYQKAIQCNSTFAVAYSNL 211
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
Q+GD A++ +A++ + + I+L + + E +++A +Y++ L
Sbjct: 212 GCVYNQRGDIWLAIHNFEKAVKLDVTFLDAFINLGNMFKEARIFDRAVSAYQRALALNVG 271
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILMENNA---YE 223
+ A ++ + G+ +I +++ P+ DA ++ + L L+ + A YE
Sbjct: 272 HAVVHGNLASVYYEQGRLDLAIETYRIAIRLQPNFPDAYCNLANALKDRLLVSEAESCYE 331
Query: 224 KTLQ-HIEHA 232
+ L+ H EHA
Sbjct: 332 QALKLHPEHA 341
>gi|386813992|ref|ZP_10101216.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403489|dbj|GAB64097.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 332
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-DSALWK 106
G ++ AI +LK+ + L PNL ++ LG+ +S G K A + Y A + P +SAL+
Sbjct: 171 GKYDDAIQILKKRIELDPNLAIAHSNLGIVYSMKGMDKEAMEEYTKALEIDPGHESALYN 230
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L + + GDT +A+ Y +A A + + L Y++ Y+ A +++
Sbjct: 231 TALLYD-KTGDTDRAIQYYIKATEANVSNADAQYRLGKNYIKKKQYDDAINAFQIAVMTN 289
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEE 195
PDN A+++ G ++ G+ +E
Sbjct: 290 PDN-------AEIYQDIGNAYKAKGMKKE 311
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 35/162 (21%)
Query: 42 SLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
L YA YG F++AI + K+ + +PN + YN +GLA++
Sbjct: 62 GLHYAQYGLFDEAIEMFKKSLAKNPNNTDAYNNIGLAYA--------------------- 100
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
QKG A+ ++ I +P ++ +L S Y + G ++KA ES++
Sbjct: 101 -------------QKGMFDNAIEAFQKVIEQKPDNVDAYYNLGSAYFDTGRFDKAIESFK 147
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ ++ PD+ A + K G+ +I IL++ +++ P+
Sbjct: 148 KTVQIKPDHRSAYSLLGIAYSKIGKYDDAIQILKKRIELDPN 189
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
S + G F++AI K+ V++ P+ Y+ LG+A+S +G + A L P
Sbjct: 130 GSAYFDTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYSKIGKYDDAIQILKKRIELDPN 189
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L KG +AM +A+ +P S + A Y + GD ++A + Y
Sbjct: 190 LAIAHSNLGIVYSMKGMDKEAMEEYTKALEIDPGHESALYNTALLYDKTGDTDRAIQYYI 249
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ + N DA + ++K Q +I + + +P +A++
Sbjct: 250 KATEANVSNADAQYRLGKNYIKKKQYDDAINAFQIAVMTNPDNAEI 295
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 3/177 (1%)
Query: 31 SPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+P T L YA G F+ AI ++V+ P+ + Y LG A+ G A +
Sbjct: 85 NPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIEQKPDNVDAYYNLGSAYFDTGRFDKAIE 144
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+ + P + + LL A K G A+ +++ I +P +L Y
Sbjct: 145 SFKKTVQIKPDHRSAY-SLLGIAYSKIGKYDDAIQILKKRIELDPNLAIAHSNLGIVYSM 203
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
G ++A E Y + ++ P + A A L+ K G T R+I + + + S+AD
Sbjct: 204 KGMDKEAMEEYTKALEIDPGHESALYNTALLYDKTGDTDRAIQYYIKATEANVSNAD 260
>gi|428203744|ref|YP_007082333.1| hypothetical protein Ple7327_3576 [Pleurocapsa sp. PCC 7327]
gi|427981176|gb|AFY78776.1| tetratricopeptide repeat protein [Pleurocapsa sp. PCC 7327]
Length = 297
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+F+ AI+ + L+P P++Y A+ ALGN++ A D Y A L+P
Sbjct: 75 GDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIELNP-------- 126
Query: 108 LLTFAVQKGDTAQAMYYIRQ---AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+A G+ A Y +++ A+ K I L LA FY+ GD + A + +E+ +
Sbjct: 127 --NYAYAYGNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIE 184
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
+ + + A + K A + G LEEY K
Sbjct: 185 DYTEAIRLKDDSANTYYK---RALAYGALEEYQKA 216
>gi|392411116|ref|YP_006447723.1| putative N-acetylglucosaminyl transferase [Desulfomonile tiedjei
DSM 6799]
gi|390624252|gb|AFM25459.1| putative N-acetylglucosaminyl transferase [Desulfomonile tiedjei
DSM 6799]
Length = 513
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 2/176 (1%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
NK PGV ++ GEA L G F+ AIS L +R + + + Y G+AH L + ++
Sbjct: 126 NKDYPGVHRVKGEAEL--GLGQFQAAISDLDIALRSNADDSDAYFLRGVAHQNLKSLAAS 183
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ A L+P+++ +L +G T QA+ + ++ +PK++ +
Sbjct: 184 LSDFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLKLDPKNVDALTNRGWAKR 243
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+GDY+ A E Q K+ P A AQL+ + + ++ + L + +D
Sbjct: 244 GLGDYQGAIEDLTQSLKINPKLALALSNRAQLYTQTNRIDAAVADYTQLLSIKGAD 299
>gi|224123642|ref|XP_002319130.1| predicted protein [Populus trichocarpa]
gi|222857506|gb|EEE95053.1| predicted protein [Populus trichocarpa]
Length = 923
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y +++ I+ +E +RL P E Y + A G+ A +Y+++ L P
Sbjct: 43 GAIYYQLQDYDMCIAKNEEALRLEPRFAECYGNMANAWKEKGDIDLAIRYYLVSIELRPN 102
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L + ++KG +A RQA+ P + +L + G ++A Y
Sbjct: 103 FADAWSNLASAYMRKGRLNEASQCCRQALTLNPHLVDAHSNLGNLMKAQGLVQEAYSCYL 162
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP--SDADLSVIDLLVAILME 218
+ ++ P A A LF++ G R++ +E +K+ P DA L++ ++ A+ M
Sbjct: 163 EALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMP 222
Query: 219 NNA---YEKTLQ 227
A Y++ +Q
Sbjct: 223 QEAIVCYQQAVQ 234
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +A+ KE V+L P P+ Y LG + ALG + A Y A PK + +
Sbjct: 186 GDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIVCYQQAVQARPKYAMAFGN 245
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + ++G A+ + +QAI + + + +L + ++G ++A + Y Q L P
Sbjct: 246 LASTYYERGQLDLAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQP 305
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
++ A ++++ +A + + L V
Sbjct: 306 NHPQALTNLGNIYMEWNMSAAAASCYKATLAV 337
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 89/226 (39%), Gaps = 13/226 (5%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG A Y GN++QA+ V SP + LG + L ++ A L
Sbjct: 6 LGLAHQLYKSGNYKQALEHSSVVYERSPQRTDNLLLLGAIYYQLQDYDMCIAKNEEALRL 65
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P+ + + + +KGD A+ Y +I P +LAS Y+ G +A++
Sbjct: 66 EPRFAECYGNMANAWKEKGDIDLAIRYYLVSIELRPNFADAWSNLASAYMRKGRLNEASQ 125
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILM 217
Q L P VDA L G + E L++ P+ A L + M
Sbjct: 126 CCRQALTLNPHLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFA--IAWSNLAGLFM 183
Query: 218 ENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
E+ + LQ+ + A +KLK K YL LGN+ KA
Sbjct: 184 ESGDLNRALQYYKEA-----------VKLKPKFPDAYLNLGNVYKA 218
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + L+P+L + ++ LG A G + A+ Y+ A + P + W
Sbjct: 118 GRLNEASQCCRQALTLNPHLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSN 177
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +PK ++L + Y +G ++A Y+Q + P
Sbjct: 178 LAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIVCYQQAVQARP 237
Query: 168 DNVDATKTGAQLFLKCGQ 185
A A + + GQ
Sbjct: 238 KYAMAFGNLASTYYERGQ 255
>gi|119628676|gb|EAX08271.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_f
[Homo sapiens]
Length = 260
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 3 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 62
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 63 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 122
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 123 NVECLRFLVRLCTDLG 138
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 72/161 (44%), Gaps = 7/161 (4%)
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
+ N A ++ + + P D + +L ++GD +QA Y ++ R P +I +
Sbjct: 1 MENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIE 60
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
L ++Y++ +EKA + +E+ + P V A F + G +++ ++ +
Sbjct: 61 WLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKF 120
Query: 201 PSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
P ++ + LV + L + Y + L+ +E + +R
Sbjct: 121 PE--NVECLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 159
>gi|403307656|ref|XP_003944302.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Saimiri boliviensis boliviensis]
Length = 805
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ LG + G+ AF +Y + P + + + L
Sbjct: 548 NLSQAIEWLMQVVSVVPTNPQVLAKLGELYDREGDKSQAFQYYYESYRYFPCNIEVVEWL 607
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 608 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 667
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 668 NVECLRFLVRLCTDLG 683
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 91/231 (39%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 476 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 535
Query: 90 ------FYVIAAHLS-------------PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y + +LS P + + +L ++GD +QA Y ++ R
Sbjct: 536 LYQIANIYELMENLSQAIEWLMQVVSVVPTNPQVLAKLGELYDREGDKSQAFQYYYESYR 595
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 596 YFPCNIEVVEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 655
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 656 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 704
>gi|333910400|ref|YP_004484133.1| hypothetical protein [Methanotorris igneus Kol 5]
gi|333750989|gb|AEF96068.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanotorris
igneus Kol 5]
Length = 257
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSAL------------GNHKSAFDFYVIAAHLSP 99
+A+ + +R+ PN + Y +GL +++ ++K+A + A L+P
Sbjct: 87 KAVECFNKSIRIDPNFADAYFWMGLTYTSYYITNEPSHYAVTCDYKTARKYIGKAIELNP 146
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
+ + + D +++ YI +AI P + + A + G Y+ A Y
Sbjct: 147 NKDIYYSYMAQCYIL-DDLDKSIEYINKAIELNPDNAYYWVQKADYLELKGKYKDALLCY 205
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
++ K+ PDNVD A+L+ + G T + ILEE K+ P A+L
Sbjct: 206 DEALKIEPDNVDIMLKKAELYHRMGLTYKEKEILEEVEKIDPQKAEL 252
>gi|156100853|ref|XP_001616120.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804994|gb|EDL46393.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1874
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS-ALGNHKSA 87
K+S V ++ +A+ Y NF++ I++L++V++L+P+L + ++ LGL N K A
Sbjct: 429 KMSKEVESLMNKANSCYISQNFDECIAVLEKVIKLAPSLHDPFHLLGLIQEREYKNVKKA 488
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
++Y+IAAHLS D W L+ + +Y + + +R K I+ R
Sbjct: 489 INYYLIAAHLSRNDHLSWYNLIELCKMEKQYRLILYCLFKVLRIYKKKIAKR 540
>gi|386812651|ref|ZP_10099876.1| peptidase [planctomycete KSU-1]
gi|386404921|dbj|GAB62757.1| peptidase [planctomycete KSU-1]
Length = 619
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +AI ++V+ ++P+ + + LG A+S G + A D + + P D+ +
Sbjct: 385 GYYSEAIEAYQQVITINPHDTKAHIMLGSAYSKQGCYTEAIDVFKKVIYSKPDDTHAYF- 443
Query: 108 LLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
LL A +K G +A+ +QAI +P D + +L Y ++ +A ++Y+Q L
Sbjct: 444 LLGVAYEKLGSYTEAIDAYKQAISIKPDDAGMYYNLGMTYEKLERSGEAIDAYKQAIYLK 503
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
PD+ A + ++ K + +I + + + + P DAD+
Sbjct: 504 PDDTRAYRMLGMVYAKLKRHVEAIDVYKLAINIRPDDADI 543
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 19/263 (7%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++ +AI K+ + P+ E Y++LGL LG + A + Y ++P D+ L
Sbjct: 352 HYPEAIHAFKKAIDSKPDFVEAYSSLGLVCFNLGYYSEAIEAYQQVITINPHDTKAHIML 411
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ ++G +A+ ++ I ++P D L Y ++G Y +A ++Y+Q + PD
Sbjct: 412 GSAYSKQGCYTEAIDVFKKVIYSKPDDTHAYFLLGVAYEKLGSYTEAIDAYKQAISIKPD 471
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
+ + K ++ +I ++ + + P D A M Y K +H
Sbjct: 472 DAGMYYNLGMTYEKLERSGEAIDAYKQAIYLKPDDTR--------AYRMLGMVYAKLKRH 523
Query: 229 IEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD--LQWKNAI----DHADLI 282
+E + + L + ++ Y RL M + + +K AI D A+
Sbjct: 524 VEAIDVYK-----LAINIRPDDADIYYRLALMYNILNRYGEEIEAYKQAILIKPDFAEAY 578
Query: 283 TEVADTLMSLGHSNSALKYYHFL 305
+ ++ G NSAL+ Y L
Sbjct: 579 LGLGKRYVNQGDRNSALEVYKTL 601
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL-LT 110
+AI K+ + L P+ Y LG+ ++ L H A D Y +A ++ P D+ ++ +L L
Sbjct: 491 EAIDAYKQAIYLKPDDTRAYRMLGMVYAKLKRHVEAIDVYKLAINIRPDDADIYYRLALM 550
Query: 111 FAV--QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + + G+ +A +QAI +P + L YV GD A E Y+ ++ L D
Sbjct: 551 YNILNRYGEEIEAY---KQAILIKPDFAEAYLGLGKRYVNQGDRNSALEVYKTLRDLNKD 607
Query: 169 N 169
+
Sbjct: 608 S 608
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 22/190 (11%)
Query: 48 GNFEQAISLLKEVVRLSP-------NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
G + +AI K +R++ NL E Y+ LG A+G +K + PK
Sbjct: 283 GRYSEAIEAYKRAIRINATFLEVHYNLGEDYDRLGCYGEAIGIYKQII-------RIQPK 335
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
++ + +L +A++ ++AI ++P + L +G Y +A E+Y+
Sbjct: 336 NARIHYKLGEDYRILEHYPEAIHAFKKAIDSKPDFVEAYSSLGLVCFNLGYYSEAIEAYQ 395
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
Q+ + P + A + K G +I + ++ + P D A +
Sbjct: 396 QVITINPHDTKAHIMLGSAYSKQGCYTEAIDVFKKVIYSKPDDTH--------AYFLLGV 447
Query: 221 AYEKTLQHIE 230
AYEK + E
Sbjct: 448 AYEKLGSYTE 457
>gi|118357157|ref|XP_001011828.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89293595|gb|EAR91583.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 494
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 29 KLSPGVTKMLGEASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
K+ P + +L +L +AY G++ +AIS ++ ++PN+ +T+N LGL + G +
Sbjct: 338 KIRPNQSYILN--NLGFAYYLEGDYSKAISYYQQSQEINPNVYDTFNNLGLIYQNQGFAE 395
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A YV A ++ P + L + Q G+ A+YY +A A+P+ + L
Sbjct: 396 QAIQQYVKAINILPNFAEALNNLGSIYFQIGEFGTAIYYYMEAQEADPQFLEPYKSLGYI 455
Query: 146 YVEIGDYEKA 155
Y +IG E+A
Sbjct: 456 YKKIGQVEEA 465
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN E++ ++++++ PN N LG A+ G++ A +Y + ++P +
Sbjct: 324 GNIEKSKIFFEKILKIRPNQSYILNNLGFAYYLEGDYSKAISYYQQSQEINPNVYDTFNN 383
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G QA+ +AI P +L S Y +IG++ A Y + Q+ P
Sbjct: 384 LGLIYQNQGFAEQAIQQYVKAINILPNFAEALNNLGSIYFQIGEFGTAIYYYMEAQEADP 443
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILE 194
++ K+ ++ K GQ + I +
Sbjct: 444 QFLEPYKSLGYIYKKIGQVEEANNIFD 470
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 31/290 (10%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ QAI+ + + L LG+ +S +G + A Y+ P+D W
Sbjct: 188 GHENQAINCFLNALEIGLELYSPLINLGIIYSQMGRLEEAQSCYLKILKTHPQD---WNA 244
Query: 108 LLTFA---VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
LL A ++G +A +++++ D + Y ++G E+A YE K
Sbjct: 245 LLGLAKLFTKRGMIEEAKFFLQKCSLIYNLDQDNCDDIVYCYCQLGMIEEAIIWYENALK 304
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
PD+V QL L+ G +S E+ LK+ P+ + + + +L A +E + Y K
Sbjct: 305 FMPDSVFHLIIIGQLHLRNGNIEKSKIFFEKILKIRPNQSYI-LNNLGFAYYLEGD-YSK 362
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI----DHAD 280
+ + + +Q + + + L G+ Y G E+ A Q+ AI + A+
Sbjct: 363 AISYYQQSQEINPNVYDTFNNL----GLIYQNQGFAEQ-----AIQQYVKAINILPNFAE 413
Query: 281 LITEVADTLMSLGHSNSALKYY--------HFLETNAGTDNGYLYLKLAE 322
+ + +G +A+ YY FLE GY+Y K+ +
Sbjct: 414 ALNNLGSIYFQIGEFGTAIYYYMEAQEADPQFLEPYKSL--GYIYKKIGQ 461
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLS---PNLPETYNTLGLAHSALGNHKSAFDFYV 92
++LG+ + Y G F+ A+ E+++++ N+P YNT+G + A Y
Sbjct: 4 RLLGQ--IFYKQGKFQDALQTFNELLQINTFKSNVPYIYNTIGSIYEQQNMKDQAIKQYQ 61
Query: 93 IAAHLSPKD-SALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A P D AL + K +A I++A+ P A FY
Sbjct: 62 KALENEPSDYEALINLGNLYFFDKNMVKEANECIKKALDLNPNCFFTWYKAAKFYDNSNQ 121
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
++A +Y++ +FP + + + AQ++ K G +I E+ +K
Sbjct: 122 NQEAIYNYKKALSIFPRDSEILYSLAQIYHKIGNNQEAIKFEEKVIK 168
>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 1280
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 7/190 (3%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFE-------QAISLLKEVVRLSPNLPETYNTLG 75
++GS + + + A YA+G +A++ + + ++P+ ETY G
Sbjct: 562 KQGSVDDYTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARG 621
Query: 76 LAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKD 135
L S LG+++ A D Y A +L+P + ++ D +A+ +AI P
Sbjct: 622 LTRSELGDNQGAIDDYTQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYTEAINISPDY 681
Query: 136 ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+ A Y ++G+Y++A + Y Q ++ + DA K G + +I
Sbjct: 682 ADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYIGRGTALYKLGDSQGAINDFHH 741
Query: 196 YLKVHPSDAD 205
L + PS AD
Sbjct: 742 ALDIDPSYAD 751
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++AI+ + +R++PN + Y+ G+A S LG+ + A D Y + +L+PK ++ +
Sbjct: 356 GNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYN 415
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G AM QAIR P + + +G+Y+ A + Y Q ++
Sbjct: 416 RGIIRSDLGSNKAAMDDCTQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQALRVDS 475
Query: 168 DNVDA 172
+ V+A
Sbjct: 476 NYVEA 480
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 65/167 (38%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G ++ G+ + AI + + +PN + Y G+A L + + + D Y A +++
Sbjct: 517 GRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLEDKQGSVDDYTQAININ 576
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P + + + GD +A+ QA+ P D + E+GD + A +
Sbjct: 577 PNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDD 636
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y Q L PD + R+I E + + P AD
Sbjct: 637 YTQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYTEAINISPDYAD 683
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+Y GN ++AI + + ++PN + YN G+A++ LG+ + A D + A ++P +
Sbjct: 862 RYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQALQINPYYAE 921
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ 161
+ + GD A+ QA++ + + E+GD + A E + +
Sbjct: 922 AYNNRGIVCYKLGDRQGAIEDFNQALKINSNYVEAYNIRGNIRYELGDRQGAIEDFNR 979
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 22/166 (13%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI+ + + ++ NL + Y G+A S LG+ + A + + A ++P
Sbjct: 220 GDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINPN------- 272
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV-----------EIGDYEKAA 156
L A +G T M Y+ +AI D + +HL S + ++GD + A
Sbjct: 273 LALAAYSRGVTHSDMGYLEKAI----DDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAI 328
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ + Q+ ++ D ++ G +I + ++++P+
Sbjct: 329 DDFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPN 374
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 3/162 (1%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+Y G+ + AI +V+R++ + + Y GL + LGNH+ A + + A ++P +
Sbjct: 318 RYDLGDKQGAIDDFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQ 377
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ Q GD A+ Q++ PK S + ++G + A + Q
Sbjct: 378 AYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDCTQAI 437
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ P+ +A + G G +++Y++ D++
Sbjct: 438 RINPNYAEAYNNRGAIRTYLGNYQ---GAIDDYIQALRVDSN 476
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 48/121 (39%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + A+ + +R++PN E YN G + LGN++ A D Y+ A + +
Sbjct: 424 GSNKAAMDDCTQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYN 483
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T + D A+ QAI P +GD + A + Y Q P
Sbjct: 484 WGTTRINLEDNEGAIDDYTQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNP 543
Query: 168 D 168
+
Sbjct: 544 N 544
>gi|242065108|ref|XP_002453843.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
gi|241933674|gb|EES06819.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
Length = 1011
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y N++ I+ +E + + P E Y + A G+ A +Y+ A L P
Sbjct: 128 GAIYYQIRNYDMCIAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPN 187
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
W L + +KG +A RQA+ P+ + +L + G ++A Y
Sbjct: 188 FCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYI 247
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--LSVIDLLVAILME 218
+ ++ P A A LF++ G +++ +E +K+ PS AD L+ ++ A+ M
Sbjct: 248 EALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMP 307
Query: 219 NNA---YEKTLQ 227
+A Y++ LQ
Sbjct: 308 QDAIMCYQRALQ 319
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 69/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + ++P L + ++ LG A G + A+ Y+ A + P + W
Sbjct: 203 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSN 262
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P ++ + Y +G + A Y++ + P
Sbjct: 263 LAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCYQRALQARP 322
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D A A ++ + GQ +I + + P
Sbjct: 323 DYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDP 356
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + + L N P+ LG + +A FY A ++ S+
Sbjct: 373 GRVEEAINCYRSCLALQANHPQALTNLGNIYMEWSMISAAASFYKAAISVTSGLSSPLNN 432
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + + EIG +A + Y Q + P
Sbjct: 433 LAVIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRP 492
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ +A A + G +I ++ L++ P
Sbjct: 493 NMAEAHANLASAYKDSGHVETAIVSYKQALRLRP 526
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++A+ KE V+L P+ + Y G + ALG + A Y A P + +
Sbjct: 271 GDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCYQRALQARPDYAMAYGN 330
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T ++G A+ QAI +P+ + ++ + + G E+A Y L
Sbjct: 331 LATIYYEQGQLDMAIRCYNQAIVYDPQFVEAYNNMGNALKDAGRVEEAINCYRSCLALQA 390
Query: 168 DNVDATKTGAQLFLK 182
++ A ++++
Sbjct: 391 NHPQALTNLGNIYME 405
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P LG ++++ A S K + ++ L N L + + GN+ A Y
Sbjct: 393 PQALTNLGNIYMEWSM--ISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCY 450
Query: 92 VIAAHLSPKDS-ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
+ P + AL + TF + G +A+ QA P +LAS Y + G
Sbjct: 451 TEVLRIDPTAADALVNRGNTFK-EIGRVNEAIQDYVQAATIRPNMAEAHANLASAYKDSG 509
Query: 151 DYEKAAESYEQIQKLFPDNVDAT 173
E A SY+Q +L PD +AT
Sbjct: 510 HVETAIVSYKQALRLRPDFPEAT 532
>gi|188997334|ref|YP_001931585.1| PDZ/DHR/GLGF domain-containing protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932401|gb|ACD67031.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 668
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+LG A Y G +++A+ L E ++L PNL + + L +++ L + A + A
Sbjct: 149 LLGSA--YYLKGEYQKAVEALNESIKLDPNLSDPFFFLAMSYGKLKEYGKAVEAAKRAIE 206
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L PK + L + +A ++++I +PK I + LA Y E Y++A
Sbjct: 207 LDPKAPTYYAVLGLIYKDQKKYKEAEENLKKSIELDPKSIVSYLKLADLYYEKESYKEAV 266
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI----------GILEEYLKVHPSDADL 206
+ ++ ++ P N++A + ++ GQ ++I I E +++ ++ D
Sbjct: 267 NTLTKVLEINPSNMEANYSLIYTYMAMGQFDKAIESANKAIKHNTITEAGIRIKKAEGDY 326
Query: 207 SVIDLL 212
V++++
Sbjct: 327 PVVEMV 332
>gi|345303567|ref|YP_004825469.1| hypothetical protein Rhom172_1716 [Rhodothermus marinus
SG0.5JP17-172]
gi|345112800|gb|AEN73632.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 402
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 39 GEASLQYAYGNFEQ------AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
GEA+LQ +EQ + +++E VR +P+ P + LG A G ++ A Y
Sbjct: 258 GEAALQ----RYEQLRELNAQVQMMEEAVRTTPDNPYAFAALGAALRRSGRYEEALRAYT 313
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
IA LSP + + L +GDT AM R+A++A+ I ++L + G+
Sbjct: 314 IALFLSPDNPEILNNLAALYFVQGDTLAAMQTYRRALQADSTFIDAWLNLGVLHALRGER 373
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQL 179
AA ++ Q+ + P + A + A+L
Sbjct: 374 AAAAYAWRQVLRYDPQHEAARRYLARL 400
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 130/353 (36%), Gaps = 29/353 (8%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
R+ + + P V +L +A +F QA++L R P+ P Y G ++ +
Sbjct: 25 RQTERRPVDPRVRALLLQAEQALQRYDFAQALALADSAARYDPDEPAIYFLQGRLYAEMA 84
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
A Y P +W L ++ +A+ ++ ++ P + + +
Sbjct: 85 QFDRAEAAYQEVLQRDPNFRGIWHNLANLKARQHRFREAIALYQKELQRYPGAPTWQA-M 143
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A Y E+G + AA +Y Q +L V A QL G+ A ++ + + P
Sbjct: 144 ARAYRELGVVDSAAYAYRQALQLDSTYVPAYIGMTQLLDDEGRFAEALTYAQRAQALDPE 203
Query: 203 DADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEK 262
+ + + LL +LM+N + + L +++ + G LR+G E+
Sbjct: 204 NPETNY--LLGELLMKNGRFAEALPYLQRV----VAAWPWHASAHYSLGQALLRVGRREE 257
Query: 263 AEI----------LFADLQW-----KNAIDHADLITEVADTLMSLGHSNSALKYYH---F 304
E L A +Q + D+ + L G AL+ Y F
Sbjct: 258 GEAALQRYEQLRELNAQVQMMEEAVRTTPDNPYAFAALGAALRRSGRYEEALRAYTIALF 317
Query: 305 LETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
L DN + LA Y + A+ + +AL IDA L L L
Sbjct: 318 L----SPDNPEILNNLAALYFVQGDTLAAMQTYRRALQADSTFIDAWLNLGVL 366
>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
gi|385777647|ref|YP_005686812.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|419722800|ref|ZP_14249937.1| peptidase S41 [Clostridium thermocellum AD2]
gi|419726301|ref|ZP_14253324.1| peptidase S41 [Clostridium thermocellum YS]
gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|380770353|gb|EIC04250.1| peptidase S41 [Clostridium thermocellum YS]
gi|380781180|gb|EIC10841.1| peptidase S41 [Clostridium thermocellum AD2]
Length = 745
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 2/202 (0%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
S LG+ A G +E+A+ + + ++ +L + YN G ++L ++ + +
Sbjct: 57 SGNAMAYLGKGLALDALGKYEEALEFFDKAIEINKDLAKAYNAKGTTLASLERYEESLEN 116
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
+ AA L PK+SA + G +A+ Y +A++ P+ + +G
Sbjct: 117 FKKAAELKPKNSAYQNDVAYGLNNLGRFEEAIQYAEKALKLNPRSGVAYSNKGFALDALG 176
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
++A E Y++ +L P +A + K G+T +I +L++ L++ P D D I
Sbjct: 177 KLDEAIECYDKAIELSPTYTNAYYNKSIAVFKMGKTEEAIELLDKVLEIDPDDLD--AIT 234
Query: 211 LLVAILMENNAYEKTLQHIEHA 232
L E YEK ++ + A
Sbjct: 235 SKGYCLNELGKYEKAIECFDTA 256
>gi|115350207|ref|YP_772046.1| hypothetical protein Bamb_0151 [Burkholderia ambifaria AMMD]
gi|115280195|gb|ABI85712.1| TPR repeat-containing protein [Burkholderia ambifaria AMMD]
Length = 833
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 40 EASLQYAYGN----------FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+ASL A+ N + QA+ +E +R++P+L + +N G AH LG+ +A
Sbjct: 270 DASLAAAHANLSGVRRRQARYAQALVHAQEAIRIAPHLADAHNQAGNAHHGLGDLVAAQA 329
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
Y A L+P DS L +++ A A+ Y RQA+ +S+ ++L
Sbjct: 330 CYRTALELNPADSGTCHNLSVVLLKRERHADALAYCRQALAGGRPTVSMYVNLGDILRAQ 389
Query: 150 GDYEKAAESYEQIQKLFPDNV--DATKTGAQLFLKCGQTA 187
G+ + A +Y L D+ DA + +L +A
Sbjct: 390 GNVDAAVPAYRDALALVRDDASDDAAEVLGRLLFAAAASA 429
>gi|403307654|ref|XP_003944301.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Saimiri boliviensis boliviensis]
Length = 834
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ LG + G+ AF +Y + P + + + L
Sbjct: 577 NLSQAIEWLMQVVSVVPTNPQVLAKLGELYDREGDKSQAFQYYYESYRYFPCNIEVVEWL 636
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 637 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 696
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 697 NVECLRFLVRLCTDLG 712
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 91/231 (39%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 505 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 564
Query: 90 ------FYVIAAHLS-------------PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y + +LS P + + +L ++GD +QA Y ++ R
Sbjct: 565 LYQIANIYELMENLSQAIEWLMQVVSVVPTNPQVLAKLGELYDREGDKSQAFQYYYESYR 624
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 625 YFPCNIEVVEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 684
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 685 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 733
>gi|296109098|ref|YP_003616047.1| hypothetical protein [methanocaldococcus infernus ME]
gi|295433912|gb|ADG13083.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus infernus
ME]
Length = 317
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAAHLSPKDSALWK 106
G +E+A+S++++ + L P+ G LGN+ A++ F + L+ + K
Sbjct: 158 GRYEEALSVIEKGLELDPDNRVLLYMKGSLLRRLGNYHKAYETFKKLIDELNVRWLDAIK 217
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L++ + G +A+ Y + + D +L +L Y E+G+ KA E+Y + L+
Sbjct: 218 HLVSLCLVLGKFDEAVKYAKMGLEIRDDDTTLWYYLGQAYEELGEENKAIEAYNRCVALY 277
Query: 167 PDNVDATKTGAQLFLKCGQTARSIG 191
PDNV A A+L+ + G+ +++
Sbjct: 278 PDNVRALLNLARLYEERGEMEKAVN 302
>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 1675
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+ +A+++ + + L+ ++N LGL + LG + A D Y A L P W L
Sbjct: 854 YAEALTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHNLG 913
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
Q GDT A +AI P+D + + ++G+ +A +YEQ+ L PD
Sbjct: 914 KELTQLGDTDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDR 973
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+A + Q R++ E + DL
Sbjct: 974 AEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDL 1010
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A++ + + L P+ E + LG LG + A Y A L P+D W
Sbjct: 109 ALACYNKTIELQPHKQEAWANLGWVLVGLGRWEEALASYDRALELRPEDGEAWANRGWVL 168
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
Q G QA+ +I P+D E+G Y++A +Y++ ++ PD+
Sbjct: 169 FQLGYYQQAIENCECSIELNPEDRFAWYQKGRALFELGSYDRALAAYDRALEISPDDSLT 228
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
L GQ + G E+ L + PSD
Sbjct: 229 LSNKGWLLFHIGQVQAACGCYEQSLHIDPSD 259
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 5/178 (2%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P ++ Q+ G FE AIS ++ RL P +N LG+A L +++A
Sbjct: 458 QLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAA 517
Query: 88 FDFYVIAAHLSPKDSALW--KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
Y + P+ W K + F + + D A A Y + ++ +P +L
Sbjct: 518 IASYERTLQIQPQFHQAWYNKGMAQFHLSQYDRALASY--DRTLKLKPDYYQAWNNLGFV 575
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+G YE+A SY KL P+ A G+ A +I ++ L P+D
Sbjct: 576 LFHLGRYEEAISSYNHTLKLNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPND 633
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E A+ + V +L P L E ++ G L + A Y A L+PKD++ W
Sbjct: 376 GELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWND 435
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G A+ R+A + EP +L ++G +E A SYEQ +L+P
Sbjct: 436 RGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATRLYP 495
Query: 168 DNVDATKT--GAQLFLKCGQTARSIGILEEYLKVHP 201
+ A AQ L+ + A I E L++ P
Sbjct: 496 EFYTAWNNLGVAQFHLQRYEAA--IASYERTLQIQP 529
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 62/154 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+FE A++ +V +L P+ +N G LG + A Y + L P+ + W
Sbjct: 342 GDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSN 401
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ +A+ QA PKD S +G YE A + Y + +L P
Sbjct: 402 RGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEP 461
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
DA + K G+ +I E+ +++P
Sbjct: 462 SLSDAWNNLGKTQFKLGKFETAISSYEQATRLYP 495
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 64/158 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E AI ++ + L P+ ++ LG + LG+ A Y A P+D+ W
Sbjct: 886 GRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYG 945
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ Q G+ ++AM+ Q +P + +E+A YE++ L
Sbjct: 946 MGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTN 1005
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ D + Q+ K + ++ E L ++ + AD
Sbjct: 1006 PSYDLCYSHGQVLTKLNRHQEALACYELALTLNKNAAD 1043
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 4/153 (2%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL-- 108
++A++ + L+P +N G A LG ++ A D Y A L P S W L
Sbjct: 413 QEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGK 472
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
F + K +TA + Y QA R P+ + +L + YE A SYE+ ++ P
Sbjct: 473 TQFKLGKFETAISSY--EQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQ 530
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
A Q R++ + LK+ P
Sbjct: 531 FHQAWYNKGMAQFHLSQYDRALASYDRTLKLKP 563
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+ ++ +Q A G++E A+ + + L P+ PE + G LGN+ +A A
Sbjct: 1079 LYNQSRVQAAQGDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNTAVASLQTATG 1138
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
++P+ + W L +G+ A+ RQA+ EP ++ +E A
Sbjct: 1139 IAPESARSWALLGKAEYHRGEFVAALAAYRQALELEPHRAETWYDRGYLLGQLERWEDAL 1198
Query: 157 ESYEQIQKLFPD 168
SY++ + P+
Sbjct: 1199 ISYDRATESDPN 1210
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 2/157 (1%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
K+ L+ G A Q GN E A+ ++ +++P P + G H L +
Sbjct: 1465 GKSPLTASTWNSRGTALFQL--GNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQQYA 1522
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A Y + + D+A W + G A+ + +A+ +P+ I R +
Sbjct: 1523 EALQCYQTSLKIDANDAATWYKQAISQQALGRLDAAIISLTKAVEIDPQFILARYRRGNI 1582
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK 182
Y+ ++E A YE L PD A + L+
Sbjct: 1583 YLLQREFEAALTDYEVTLNLDPDRAAAWNSRGNCLLE 1619
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 61/152 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A++ + L P E + G LG ++ A + + L+P+D W Q
Sbjct: 138 GRWEEALASYDRALELRPEDGEAWANRGWVLFQLGYYQQAIENCECSIELNPEDRFAWYQ 197
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ +A+ P D + IG + A YEQ + P
Sbjct: 198 KGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYEQSLHIDP 257
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
+ A Q+ + GQ +I ++ L++
Sbjct: 258 SDRFAWNNHGQVLFQLGQIRAAIDAYQKALEL 289
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++++A+ ++ ++L+ + ++ G L + A Y A L+ +D W L
Sbjct: 819 SWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDYHSWNDL 878
Query: 109 -LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
LTFA G + A+ RQAI +P +L ++GD + A+ +YE+ P
Sbjct: 879 GLTFA-HLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGASAAYERAIAYHP 937
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ D L + G+ + ++ E+ + P A+
Sbjct: 938 QDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAE 975
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 58/157 (36%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G AI ++ + L + +N LG+AH + + A Y A L+P+ A W
Sbjct: 274 GQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCYRAAIELAPEFQAAWCN 333
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD A+ + + +P + + +G+ E A YE + KL P
Sbjct: 334 QGKVLFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQP 393
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ + L + ++ + + P DA
Sbjct: 394 QLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDA 430
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/163 (17%), Positives = 68/163 (41%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
Q+ +++A++ ++L P+ + +N LG LG ++ A Y L+P+
Sbjct: 542 QFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLKLNPEFYP 601
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
W +G A+A+ +A+ +P D L ++ + +A +++
Sbjct: 602 AWYNHGMTLAHQGRDAEAIESYDKALGFQPNDPYLWHSRGRALAKLERHAEALTCFDRSI 661
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ P+N + Q G+ ++ + L++ P D ++
Sbjct: 662 DILPENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEI 704
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 7/202 (3%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
+A++ + + P E + G + +ALG + +A + Y L PKD +W
Sbjct: 652 EALTCFDRSIDILPENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEIWHSYGIV 711
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ + A+ +A+ P + E+G +E A +Y++ + P
Sbjct: 712 QGLRQEYTAALESYDRALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSFAP 771
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-----NAYEKTL 226
A++ Q K + A +I + L P D +E+ +Y++ L
Sbjct: 772 ASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQAL 831
Query: 227 QHIEHAQIV-RFSGKELPLKLK 247
+ A IV F GK L LKL+
Sbjct: 832 KLNASAAIVWHFQGKTL-LKLQ 852
>gi|119628672|gb|EAX08267.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_b
[Homo sapiens]
Length = 795
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVD---ATKTG 176
NV+ + +TG
Sbjct: 696 NVECSGSVRTG 706
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 34/197 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDADLS 207
++ + P + + S
Sbjct: 684 DTYKDTHRKFPENVECS 700
>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
Length = 463
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G + AI+ ++ + +P + Y LGLA + GN + A + Y L P
Sbjct: 126 YKEGAPDSAIAAYRQALSFNPESADIYYNLGLALESQGNQEEAIEHYQATIRLDPDYGKA 185
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + V++ A +RQA+R +PK + L VE G+ A ES+ + K
Sbjct: 186 YYNMGLILVEQDQIGPATTALRQAVRTQPKLVKAHYQLGLLLVEQGEKSAAEESFREAVK 245
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ P A A + + G+ A +I ++ P + D
Sbjct: 246 VDPKLAPAQYQLAVILFEKGELAEAITRFRLVTELEPENVD 286
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGL---AHSALGNHKSAFDFYVIAAHLSPKDSAL 104
GN E+AI + +RL P+ + Y +GL +G +A A PK
Sbjct: 163 GNQEEAIEHYQATIRLDPDYGKAYYNMGLILVEQDQIGPATTALR---QAVRTQPKLVKA 219
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
QL V++G+ + A R+A++ +PK + LA E G+ +A + + +
Sbjct: 220 HYQLGLLLVEQGEKSAAEESFREAVKVDPKLAPAQYQLAVILFEKGELAEAITRFRLVTE 279
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P+NVDA + G+ A ++ L+ +++ P A L+ +L VA L + YE+
Sbjct: 280 LEPENVDAYRQLGAALTANGEYAEAVTTLKLAVQLDPYHA-LTHYNLGVA-LQQQEQYEE 337
Query: 225 TLQHIEHA 232
+ + A
Sbjct: 338 AMAEYQQA 345
>gi|406982607|gb|EKE03902.1| TPR Domain containing protein [uncultured bacterium]
Length = 666
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKM-LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KLSPG + + A + G + +++ E RL P+ Y ++G ++ +A
Sbjct: 58 KLSPGDALIHIKLAGILSEMGLWRESLKEYTEAARLKPDDAFIYISIGNILQENNDYDNA 117
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ Y+ A ++P + + KGDT A+ Y ++ + P R +LAS Y+
Sbjct: 118 LNAYMQALDIAPTYKYNYLNIAIIKNMKGDTDGAIDYYKKFLTYYPDHTETRKNLASIYL 177
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ EKA E YE I + P+N + L Q ++I +L+ + +P+DA+
Sbjct: 178 ALNKPEKAIEEYEIILNINPNNFKEYANYGKALLLVKQYVKAIDVLKTAIAKNPNDAE 235
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+ +AI +LK + +PN E + L +A+ A + Y+IA ++P L
Sbjct: 216 YVKAIDVLKTAIAKNPNDAEAHANLAIAYINTNRKPDAVNEYLIALKINPALHNARFDLA 275
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G T +A+ + I A P D + +LA Y +KA + L PD+
Sbjct: 276 NLLTKMGKTDEAILHYEAYIAALPDDHAAHYNLAVLYQNKNQLDKAIAGLQTALGLKPDD 335
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
++ + A+ + ++IG+ E L+ D +L
Sbjct: 336 INIKQELARSYHLAKNYEKAIGLYSEVLQSKKDDPEL 372
>gi|298492037|ref|YP_003722214.1| hypothetical protein Aazo_3466 ['Nostoc azollae' 0708]
gi|298233955|gb|ADI65091.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 374
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A+ E +RL PN E Y LGLA G ++A Y A +PK +A L
Sbjct: 116 AVQEYGEAIRLIPNFGEFYYNLGLALQKQGQKEAAIAAYRQALAANPKMAAAQYNLGVIL 175
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
++ +A+ ++AI + + + +LA + G E+A +Y QI KL P+N A
Sbjct: 176 YEEERCQEAIAAYQEAINLDRNNANAYFNLAIALQQEGQLEQAIATYRQILKLNPENTVA 235
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
L + GQ + +I I ++ + +P +A L+ +L V + + N
Sbjct: 236 YNNLGSLMVIQGQPSEAIAIYQKAIGQNPKNA-LAYYNLGVTLYNQGN 282
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 6/230 (2%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y+ +E+A+ +E +RL+P L + +N G+ LG + A + + A L P
Sbjct: 492 YSMDRYEEALEDFEEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDA 551
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
WK + D +A + ++ P+D+ + + +++G E A E +E+I
Sbjct: 552 WKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILS 611
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L PD D + A K G+ ++ E+ +P DL + ME Y+
Sbjct: 612 LNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPE--DLKIQRRKGKFAMEIGKYDT 669
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKN 274
LQ + S K + + G+ ++L E+A F ++ +N
Sbjct: 670 ALQAFDQV----LSEKPESREAWYRKGLALIKLKRFEEAITAFDEVIVRN 715
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE A+ L++V L P+ + G A ++ ++ A + + L+P W
Sbjct: 461 GKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRLNPYLEKGWNN 520
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G T +A+ +A+ P + + + DYEKA+E+++++ K P
Sbjct: 521 KGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNP 580
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+++D+ LK G+T ++ E+ L ++P DL
Sbjct: 581 EDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDL 619
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Query: 46 AYGNFEQAISLLKEVVRLSP-NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
A ++E+A EV++ +P +L YN G A LG ++A + + L+P L
Sbjct: 561 AVDDYEKASEAFDEVLKTNPEDLDSIYNR-GTALLKLGKTETALECFEKILSLNPDYPDL 619
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L + G +A+ + P+D+ ++ F +EIG Y+ A ++++Q+
Sbjct: 620 LYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQAFDQVLS 679
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
P++ +A +K + +I +E + + ++ ++S D
Sbjct: 680 EKPESREAWYRKGLALIKLKRFEEAITAFDEVIVRNLNNKEISNSD 725
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 5/215 (2%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
FE A+ + ++P+ P+ + GLA + L ++++ + A L P+ + W
Sbjct: 89 FEAALETYDNALEINPDNPKIWYQKGLAFAELEKNEASILCFEKAIELEPECGSAWYARG 148
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T + G+ +A+ A+ PK+ + Y +A E ++ + + P +
Sbjct: 149 TVTGKTGNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREKPRH 208
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHP-SDADLSVIDLLVAILMENNAYEKTLQH 228
DA K +K G+ ++ ++ +L+ P S+ L +L+ L EKT
Sbjct: 209 KDAWKQKYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFTK 268
Query: 229 IEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
I + KE+ LK K A I LRL + KA
Sbjct: 269 ILK---INPGNKEIWLK-KGLALIQLLRLNDAIKA 299
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL-L 109
E+A+ +V+ P + G+A + L ++A + Y A ++P + +W Q L
Sbjct: 56 EEALDSFDQVLHFEPENFDALYKKGIALATLEKFEAALETYDNALEINPDNPKIWYQKGL 115
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
FA + + A + + +AI EP+ S + + G+YE+A E +E ++ P N
Sbjct: 116 AFAELEKNEASILCF-EKAIELEPECGSAWYARGTVTGKTGNYEEALECFEHALEINPKN 174
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
DA + + + ++ + ++ P D
Sbjct: 175 SDACYSKGLVLANLEKYGEALECFDSLIREKPRHKD 210
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 34/156 (21%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A+ + + +P E + G++HS L HK A + L P
Sbjct: 1034 YERALEVFSRLTENNPLFVEAWYLKGISHSKLKQHKEAAKDFEKVLELDP---------- 1083
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
A Q D ++ L+ Y E+G++E+A +E K+ P+N
Sbjct: 1084 --AYQ--------------------DTCYQLGLS--YFELGNFEEAIRVFESALKMDPEN 1119
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+DA + L+ + S E LK +PSD +
Sbjct: 1120 LDALYMRSLALLRSKRYGESASGFREVLKRNPSDTE 1155
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 65/155 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+E+A+ + + ++P + + GL + L + A + + P+ WKQ
Sbjct: 155 GNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREKPRHKDAWKQ 214
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ G +A+ + +R P + E+ YE A +++ +I K+ P
Sbjct: 215 KYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFTKILKINP 274
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
N + ++ + +I EE +K+ P+
Sbjct: 275 GNKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPT 309
>gi|357142312|ref|XP_003572530.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 1001
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 71/154 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G A ++ + ++P L + ++ LG + G + A+ Y+ A H+ P+ + W
Sbjct: 193 GRLNDAAQCCRQALAINPRLVDAHSNLGNLMKSQGFIQEAYSCYIEALHIDPRFAIAWSN 252
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++AI+ +P ++ + Y +G + A SY++ + P
Sbjct: 253 LAGLFMEAGDLDKALLYYKEAIKLKPSFADAHLNQGNVYKAMGKPQDAIMSYQRALQARP 312
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D A A ++ + GQ ++ + + P
Sbjct: 313 DYAMAYGNLATIYYEQGQLDMAVRCYNQAIVCDP 346
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 68/165 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y N++ I +E + + P E Y + A G+ A +Y+ A L
Sbjct: 118 GAIYYQIRNYDMCIEKNEEALAIDPQFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRSN 177
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
W L + +KG A RQA+ P+ + +L + G ++A Y
Sbjct: 178 FCDAWSNLASAYTRKGRLNDAAQCCRQALAINPRLVDAHSNLGNLMKSQGFIQEAYSCYI 237
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ + P A A LF++ G +++ +E +K+ PS AD
Sbjct: 238 EALHIDPRFAIAWSNLAGLFMEAGDLDKALLYYKEAIKLKPSFAD 282
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 63/154 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + + L N P+ LG + +A FY A ++ S+
Sbjct: 363 GRVEEAINCYRSCLALQANHPQALTNLGNIYMEWNLVTTAASFYKAAISVTSGLSSPLNN 422
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q+G+ A A+ + +R +P ++ + + EIG +A + Y Q + P
Sbjct: 423 LALIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRP 482
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+A A + G +I ++ L + P
Sbjct: 483 TMAEAHANLASAYKDSGHVETAIVSYKQALHLRP 516
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 58/135 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++A+ KE ++L P+ + + G + A+G + A Y A P + +
Sbjct: 261 GDLDKALLYYKEAIKLKPSFADAHLNQGNVYKAMGKPQDAIMSYQRALQARPDYAMAYGN 320
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T ++G A+ QAI +P+ I ++ + + G E+A Y L
Sbjct: 321 LATIYYEQGQLDMAVRCYNQAIVCDPQFIEAYNNMGNALKDSGRVEEAINCYRSCLALQA 380
Query: 168 DNVDATKTGAQLFLK 182
++ A ++++
Sbjct: 381 NHPQALTNLGNIYME 395
>gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 747
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
+G E+AI+ + V+ L P+ + +N LG+A + G A + A L+P D+ W
Sbjct: 119 WGKLEEAIAAYRRVLTLKPDYVDAHNNLGIALARQGVMTEATEVLRRALQLAPADAGAWN 178
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
++G +A+ R+A+ P + + E+G +E A +Y + +L
Sbjct: 179 NFGIVLAEQGRFGEAVEAYRRALELAPNQPEAHNNFGNACKELGQFESAVAAYRRAVELR 238
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
PD+ + + G+ ++ L + P A+
Sbjct: 239 PDSAEFQANLGNGLREQGRFDEAMAAYRHALALQPKRAE 277
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+LG A++Q G E A++LL V L PN P ++ LG A+ LG +
Sbjct: 43 LLGVAAMQT--GRAELAVNLLNRVAALVPNHPAVHSNLGEAYRGLGKFE----------- 89
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
+A+ R+A++ +P D+ + +L + VE G E+A
Sbjct: 90 -----------------------EAVASFRRALQLKPDDVLAQYNLGNVLVEWGKLEEAI 126
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+Y ++ L PD VDA + G + +L L++ P+DA
Sbjct: 127 AAYRRVLTLKPDYVDAHNNLGIALARQGVMTEATEVLRRALQLAPADA 174
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 11/160 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G F +A+ + + L+PN PE +N G A LG +SA Y A L P +
Sbjct: 188 GRFGEAVEAYRRALELAPNQPEAHNNFGNACKELGQFESAVAAYRRAVELRPDSAEFQAN 247
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++G +AM R A+ +PK + + G + A +Y +L P
Sbjct: 248 LGNGLREQGRFDEAMAAYRHALALQPKRAETHHEMGNALAGQGQLDAAVLAYRATLELKP 307
Query: 168 DNVDATKTGAQLFLKC--GQTARSIGILEEYLKVHPSDAD 205
D A +C G R G+L+E + + A+
Sbjct: 308 DYGVA---------RCNLGNVLRDQGMLDEAIAAYRRAAE 338
>gi|55725300|emb|CAH89515.1| hypothetical protein [Pongo abelii]
Length = 475
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 322 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 381
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ ++ FP+
Sbjct: 382 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTRRKFPE 441
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 442 NVECLRFLVRLCTDLG 457
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G++E+A KE +R + E +GL + L A D ++ + + +
Sbjct: 250 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 309
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ + +QA+ ++ Q + P D + L Y GD +A + Y + +
Sbjct: 310 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 369
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ +EK
Sbjct: 370 YFPCNIE------------------------------------VIEWLGAYYIDTQFWEK 393
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A +++ + +K ++ C+ R GN +KA + D + K
Sbjct: 394 AIQYFERASLIQPT----QVKWQLMVASCFRRSGNYQKALDTYKDTRRK 438
>gi|384209304|ref|YP_005595024.1| hypothetical protein Bint_1828 [Brachyspira intermedia PWS/A]
gi|343386954|gb|AEM22444.1| hypothetical protein Bint_1828 [Brachyspira intermedia PWS/A]
Length = 760
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 92/186 (49%), Gaps = 14/186 (7%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
Y +++AI L ++ + ++Y + + N+ + D Y + ++ P D++ +
Sbjct: 339 YKEYDKAIELYNKISK------DSYENIATIYEKTKNYYKSIDIYKMLINMYPDDASSYY 392
Query: 107 QLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ + +K + +A+ Y R+AI + K+ I++A Y +I +YE+AA Y + +L
Sbjct: 393 SNIAYIYKKIKNYEEAINYYRKAIETDSKNTDYYINIAETYEKIKNYEEAANYYNKTIEL 452
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
+ K A+ + G+ ++I +EYLK+ ++ ++S L + + N T
Sbjct: 453 YNGPCRYYKKLAEAYKNIGKYEKAIEAYKEYLKIVNNEHEVS---FLYTVCFKLN----T 505
Query: 226 LQHIEH 231
L++I H
Sbjct: 506 LKNIAH 511
>gi|221058130|ref|XP_002261573.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247578|emb|CAQ40978.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1785
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS-ALGNHKSA 87
K++ V ++ +A+ Y NF++ I +L++V++L+P+L + ++ LGL H N K A
Sbjct: 394 KMNKEVESLMNKANTCYICQNFDECIRILEKVIKLAPSLHDPFHLLGLIHEREYKNVKKA 453
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
++Y+IAAHLS D W ++ +Y + + +R + +S R
Sbjct: 454 INYYLIAAHLSRNDYLSWYNIIELCKIDKQYNLILYCLFKVLRIYRRKLSKR 505
>gi|158336391|ref|YP_001517565.1| hypothetical protein AM1_3253 [Acaryochloris marina MBIC11017]
gi|158306632|gb|ABW28249.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 237
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI L + + P+ E + + L LGN++ A A + P W
Sbjct: 48 GRYEEAIDSLDHALEIQPSWYEAWYSRALYLHCLGNNREAITSLHSALKIQPNYLLAWDM 107
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ G +A+ A+ EP D+ + I+ A + +G ++A S +Q ++ P
Sbjct: 108 RGLILIESGRFEEALASFDHALDIEPDDVQIWINKAGTQLLLGRKKEATHSLKQALEVTP 167
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+N K + L GQ +I E L + P D ++
Sbjct: 168 ENYPDWKMLGDMLLDLGQYEEAITSFEHALDIKPKDFEI 206
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 10/223 (4%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G FE+A+ + ++++ + G++ LG ++ A D A + P
Sbjct: 11 YDLGQFEEAVMTYDQALQVNHKDDAVWFRRGISLGNLGRYEEAIDSLDHALEIQPSWYEA 70
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W + G+ +A+ + A++ +P + +E G +E+A S++
Sbjct: 71 WYSRALYLHCLGNNREAITSLHSALKIQPNYLLAWDMRGLILIESGRFEEALASFDHALD 130
Query: 165 LFPDNVD--ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAY 222
+ PD+V K G QL L G+ + L++ L+V P + +L +L++ Y
Sbjct: 131 IEPDDVQIWINKAGTQLLL--GRKKEATHSLKQALEVTPE--NYPDWKMLGDMLLDLGQY 186
Query: 223 EKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
E+ + EHA + K ++ GI +LG +A I
Sbjct: 187 EEAITSFEHALDI----KPKDFEIWFLRGIALRKLGRYVRAII 225
>gi|193785201|dbj|BAG54354.1| unnamed protein product [Homo sapiens]
Length = 795
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVD---ATKTG 176
NV+ + +TG
Sbjct: 696 NVECSGSVRTG 706
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 34/197 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDADLS 207
++ + P + + S
Sbjct: 684 DTYKDTHRKFPENVECS 700
>gi|383786918|ref|YP_005471487.1| hypothetical protein [Fervidobacterium pennivorans DSM 9078]
gi|383109765|gb|AFG35368.1| tetratricopeptide repeat protein [Fervidobacterium pennivorans DSM
9078]
Length = 359
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
SL + E AI L + L P L ++Y+ +G A+ +G+++ A +++ LSP
Sbjct: 139 GSLLLEENDVEGAIKYLNRSIELDPWLVQSYSMIGEAYYNIGDYEKAIEYWEKEIKLSPT 198
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
++ + L + G +A+ + + +I LA Y IG+ EKA E
Sbjct: 199 NTFTYFMLADAYSKMGKIDKAIEVLERFRETYENNIIALYELAELYKRIGNEEKAKEYES 258
Query: 161 QIQKLFP-DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN 219
I ++ P + + + A++ LK G + I ++E +K P L+++ L +
Sbjct: 259 LIMEIDPRSDPNGIEIWAKVHLKKGNYDKVIQVIENVVKTSPEARHLNLV--LAVAYAKT 316
Query: 220 NAYEKTLQHIE 230
N YE+ + IE
Sbjct: 317 NRYEQARKIIE 327
>gi|411119113|ref|ZP_11391493.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710976|gb|EKQ68483.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 380
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 135/352 (38%), Gaps = 66/352 (18%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN A+S ++ L P ++ +G +++ GNH+ A Y A L P ++
Sbjct: 71 GNLPGALSAYRQAAELDRTNPRIFSGIGFLYASQGNHEEAIRAYQQAVTLEPNNAEFHYA 130
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G T+ A+ R+A + P+ ++ + + G YE+A E Y ++ + P
Sbjct: 131 IGFSLANLGRTSDAIAAYRRATQLNPRHVNANLGIGVLLARQGRYEEALEMYRRVAAIAP 190
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
N A + L+ + + L++ ++ P A
Sbjct: 191 QNFKAQELQGTALLQMKRPRDAFTPLQQAARIAPRQA----------------------- 227
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFA---DLQWKNAIDHADLITE 284
IVR V G +L+L + +KA F+ +L+ +N + +
Sbjct: 228 ------IVR-----------VHIGTGWLQLQDYQKAMNAFSKAVELEPRNPY----IQVQ 266
Query: 285 VADTLMSLGHSNSALKYYH--------FLETNAGTDNGYLYLKLAECYLSLKERAHAIMF 336
+ L + G+ + A++ + E +AG + + Y + A+
Sbjct: 267 IGKALQAAGYLDEAMRAFQRAISLQSTLAEAHAG---------VGDIYFEQSNYSSAVNL 317
Query: 337 FYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSN 388
+ +AL + + L + + +++EA T L K L L+ SD+S+
Sbjct: 318 YRQALAYSPQDPEIHYKLGKAMKQMGRKQEAATSLQQAKQL--LEQQSDQSD 367
>gi|218777993|ref|YP_002429311.1| hypothetical protein Dalk_0133 [Desulfatibacillum alkenivorans
AK-01]
gi|218759377|gb|ACL01843.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 616
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-NHKSAFDFYVIAAHLSPKDSALWK 106
G+ + I +K+V+++ P+ + N LG ++ LG N + A A +SP D +
Sbjct: 478 GDKQACIETMKQVLKIEPDNADALNFLGYTYADLGQNLQEAKKLVAKALEISPDDGYIVD 537
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
+ + G+ +A+ Y+++A+ PKD +R HL Y++ G+ EKA E+Y
Sbjct: 538 SMGWVYFKLGEYEKALGYLKRAVELAPKDPVIREHLGDAYLKTGNPEKALETY 590
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
Q G+ A+ + I EP +I+L L Y + GD + E+ +Q+ K+ PDN DA
Sbjct: 442 QAGNKELAVKALTDRIEEEPDNINLLYSLGVLYDKQGDKQACIETMKQVLKIEPDNADAL 501
Query: 174 KTGAQLFLKCGQTARSI-GILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
+ GQ + ++ + L++ P D ++D + + + YEK L +++ A
Sbjct: 502 NFLGYTYADLGQNLQEAKKLVAKALEISPDDG--YIVDSMGWVYFKLGEYEKALGYLKRA 559
Query: 233 QIVRFSGKELPLKLKVKAGICYLRLGNMEKA-EILFADLQWKNAIDHADLITEVADTLMS 291
V + K+ P+ ++ G YL+ GN EKA E LQ K I D TE+ + + +
Sbjct: 560 --VELAPKD-PV-IREHLGDAYLKTGNPEKALETYRISLQGK--ILRGDDPTELKEKIRA 613
Query: 292 L 292
L
Sbjct: 614 L 614
>gi|224043184|ref|XP_002188826.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Taeniopygia guttata]
Length = 823
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P P + LG + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLLQLISVVPTDPHVLSKLGNLYDTEGDKSQAFHYYCESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A P + ++ +AS Y G+Y+KA E Y+ I + FPDNV+
Sbjct: 631 YIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEKYKVIHRKFPDNVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDMG 703
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 85/221 (38%), Gaps = 44/221 (19%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G+ E+A KE +R E LGLA+ L A D ++ + P + +
Sbjct: 496 FANGDCEKAAEFYKEALRNDSLCTEALYNLGLAYKKLNRIDEALDCFLKLHAILPNSAQV 555
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
QL + D QA+ ++ Q I P D + L + Y GD +A Y + +
Sbjct: 556 LYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTEGDKSQAFHYYCESYR 615
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 616 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 639
Query: 225 TLQHIEHAQIVRFSGKELPLKLK--VKAGICYLRLGNMEKA 263
+++ E A ++ LP ++K + CY R GN +KA
Sbjct: 640 AIEYFERAALI------LPTQVKWQLMVASCYRRSGNYQKA 674
>gi|354567937|ref|ZP_08987104.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353541611|gb|EHC11078.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 539
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+Y G++E AI+ + + ++PN + YN GLA LG+++ A Y A ++P D
Sbjct: 288 RYQLGDYEGAIADYTQAITINPNYIKAYNKSGLARYQLGDYEGAIADYTHAIIINPNDVV 347
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEP---KDISLRIHLASFYVEIGDYEKAAESYE 160
+K GD A+ Q + P D++L+ ++IGDY+ + +
Sbjct: 348 AYKNRADIRYYLGDKQGAIEDYTQVCQMYPHPEADLNLK------NMQIGDYQGEGDVFL 401
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Q +L + A K L L G +I + +K++ DAD
Sbjct: 402 QTSELKCHDFVAYKNRGDLRLDLGDYEGAIADYTQAIKINSHDAD 446
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + AI + ++L P + Y GLA LG+++ A Y A ++P + +
Sbjct: 258 GQYHAAIINYNQALQLYPYDADIYYKRGLARYQLGDYEGAIADYTQAITINPNYIKAYNK 317
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
Q GD A+ AI P D+ + A +GD + A E Y Q+ +++P
Sbjct: 318 SGLARYQLGDYEGAIADYTHAIIINPNDVVAYKNRADIRYYLGDKQGAIEDYTQVCQMYP 377
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 16/181 (8%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A ++Y G+ + AI +V ++ P+ PE L L + +G+++ D ++ + L
Sbjct: 353 ADIRYYLGDKQGAIEDYTQVCQMYPH-PEA--DLNLKNMQIGDYQGEGDVFLQTSELKCH 409
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D +K + GD A+ QAI+ D + + ++GDY A Y
Sbjct: 410 DFVAYKNRGDLRLDLGDYEGAIADYTQAIKINSHDADAYYNRGNARYDLGDYAGAIADYT 469
Query: 161 QIQKLFPDNVDA------------TKTGAQL-FLKCGQTARSIGILEEYLKVHPSDADLS 207
+ K+ ++ DA K GA F K + G L +Y KV S DL
Sbjct: 470 ETIKINFNDADAYYNRGNARCCLGDKQGAIADFHKATSIYYTEGNLAKYKKVKESILDLE 529
Query: 208 V 208
+
Sbjct: 530 I 530
>gi|428216783|ref|YP_007101248.1| sulfotransferase [Pseudanabaena sp. PCC 7367]
gi|427988565|gb|AFY68820.1| sulfotransferase [Pseudanabaena sp. PCC 7367]
Length = 830
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS-AFDFYVIAAHLSPKDSALWK 106
G +AIS L+ ++ + P+ + LG+ S + + ++ A A LSP+++ +
Sbjct: 260 GKTNEAISCLENIIEIKPDCVPAHINLGITFSEILDRQTDAIAHLRKAIELSPRNAEAYS 319
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L T ++GD AM Y +QA++ P A Y + + +KA ES ++ L
Sbjct: 320 YLATAIGKQGDVGTAMQYAKQALQLNPNLAEAHQIEAEAYGAMRELDKALESCKRALALR 379
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
P+ +A T +++ G TA +I E+ + P+
Sbjct: 380 PNFAEALNTCGNIYMMGGNTAEAIKFFEQAVAAKPN 415
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ A+ K+ ++L+PNL E + A+ A+ A + A L P +
Sbjct: 329 GDVGTAMQYAKQALQLNPNLAEAHQIEAEAYGAMRELDKALESCKRALALRPNFAEALNT 388
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G+TA+A+ + QA+ A+P + + L S GD+E+A Y+++ +++P
Sbjct: 389 CGNIYMMGGNTAEAIKFFEQAVAAKPNFLKAQYSLGSALQTSGDFERALAVYDRVLRIYP 448
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
DN +A A + + Q + +++ + +P +
Sbjct: 449 DNPEAIAGKAGILERQKQYQAAYDLIKPLFEAYPEN 484
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
+ N +P LGE +Q A G ++ A++ ++ + + P + E Y LG H G+
Sbjct: 66 AANGNNPVFYNNLGE--VQTALGQYDHALASYEQALAIRPKMAEAYLGLGNVHKLQGDLA 123
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A D Y A ++P + ++ +Q+ D A+ QA++ P LA
Sbjct: 124 KAIDNYQKAIAVNPNYEQAYTEMALVQIQQYDAPAAVAASNQALQLNPNSAPAYRALAKA 183
Query: 146 YV-------EIGDYEKAAESYEQ 161
Y+ I YE+A YEQ
Sbjct: 184 YLLQDRTEEAIAQYEQAIAQYEQ 206
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A+ + + + N P YN LG +ALG + A Y A + PK + + L
Sbjct: 55 ELALKYINMAIAANGNNPVFYNNLGEVQTALGQYDHALASYEQALAIRPKMAEAYLGLGN 114
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+GD A+A+ ++AI P +A ++ D A + Q +L P++
Sbjct: 115 VHKLQGDLAKAIDNYQKAIAVNPNYEQAYTEMALVQIQQYDAPAAVAASNQALQLNPNSA 174
Query: 171 DATKTGAQLFLKCGQTARSIGILEE 195
A + A+ +L +T +I E+
Sbjct: 175 PAYRALAKAYLLQDRTEEAIAQYEQ 199
>gi|422338995|ref|ZP_16419955.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355372122|gb|EHG19465.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 652
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+AI+ + + L+PN Y G A + L N++ A + + A L+ +++ +
Sbjct: 162 YEKAINDFNKAIDLNPNDDSAYFNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRG 221
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T + +G+ +A+ +AI P + +L S Y + DYEKA E+ + L P+
Sbjct: 222 TLYINQGNYDEAVKDFSKAIELNPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNF 281
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
DA ++ + ++ + ++++P+D + L + ++ N YEK ++ +
Sbjct: 282 SDAYNIRGITYVNQEKFDEAVKDFSKAIELNPNDKEYYY--NLGILYIDLNNYEKAIETL 339
Query: 230 EHA 232
A
Sbjct: 340 NKA 342
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 6/214 (2%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E AI + + L+PN Y G A + L ++ A + + A L+P D + +
Sbjct: 128 YEDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRG 187
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T + +A+ +AI + S + + Y+ G+Y++A + + + +L P
Sbjct: 188 TAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFSKAIELNPIF 247
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
V L+ ++I L + + + P+ +D I + + E +++ ++
Sbjct: 248 VFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQE--KFDEAVKDF 305
Query: 230 EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
A + + KE L GI Y+ L N EKA
Sbjct: 306 SKAIELNPNDKEYYYNL----GILYIDLNNYEKA 335
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
++ G FE+AI + + L+PN +Y+ G A+ +LG + A Y A L+P +++
Sbjct: 55 FSLGKFEEAIQDYNKAIDLNPNDDLSYSNRGNAYFSLGKFEDAIQDYNKAIDLNPNNASY 114
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ T A+ + I P D + + + + +YEKA + +
Sbjct: 115 YNNRGTTFTNLEKYEDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAID 174
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
L P++ A F ++I + + ++ ++A
Sbjct: 175 LNPNDDSAYFNRGTAFTNLSNYEKAINDFNKAIDLNSNNA 214
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+++A+ + + L+P Y+ LG ++ L +++ A + A L P S +
Sbjct: 228 GNYDEAVKDFSKAIELNPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNI 287
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
V + +A+ +AI P D +L Y+++ +YEKA E+ + L P
Sbjct: 288 RGITYVNQEKFDEAVKDFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLNKAIDLDP 347
Query: 168 DNVDA 172
+ DA
Sbjct: 348 NFSDA 352
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 1/157 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYN-TLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
G FE AI + + L N+ Y G A+ +LG + A Y A L+P D +
Sbjct: 23 GKFEDAIQNYDKAIELDSNVNSVYYYNRGNAYFSLGKFEEAIQDYNKAIDLNPNDDLSYS 82
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
G A+ +AI P + S + + + + YE A + Y + L
Sbjct: 83 NRGNAYFSLGKFEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKYEDAIQDYNKTIDLN 142
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
P++ A F + ++I + + ++P+D
Sbjct: 143 PNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPND 179
>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 1421
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN + AI K+ + L P +TYN LG A+ LG A + + A + +DS +++
Sbjct: 908 GNLKGAIENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIYQN 967
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + GD A+ QAI+ P + Y +G + A + ++ +L P
Sbjct: 968 LGVVRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHP 1027
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
VDA + + +I + +K++P
Sbjct: 1028 RVVDAYTQRGIVRFEVKDIEGAIADFNDAIKLNP 1061
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
++ G+ A+ + ++++PN E YN LG + G+ + A + + PK
Sbjct: 1210 KFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHPKYVP 1269
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ ++ GD + A QA++ PK +L + E+GD E+A Y ++
Sbjct: 1270 AYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILDYNEVL 1329
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+++P +DA ++LK ++I L ++P+
Sbjct: 1330 RIYPRKIDAYVNRGLIYLKLKNYTQAIKDQTSALNINPN 1368
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+ + + G+ AI+ + +RL+P + YN +G+ G+ A + + A ++P
Sbjct: 1139 ANTKRSMGDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPN 1198
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ ++GD AM AI+ P +L + + GD++ A +
Sbjct: 1199 YAEGHNNRGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFG 1258
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ ++ P V A A LK G + + + LK++P L+ +L + I E
Sbjct: 1259 ETLRIHPKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYG-LAYYNLGL-IHTEMG 1316
Query: 221 AYEKTLQHIEHAQIVRFSGKELPLKLK--VKAGICYLRLGNMEKA 263
E+ + +++ +++R P K+ V G+ YL+L N +A
Sbjct: 1317 DLEQAI--LDYNEVLRI----YPRKIDAYVNRGLIYLKLKNYTQA 1355
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
AI + + L N Y+ +A + +GN K A + + A L PKD + L
Sbjct: 879 AIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNLKGAIENFKKALELEPKDLQTYNNLGAAY 938
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
V+ G+ +A+ QA++ + +D + +L + GD + A Y Q KL P+ +A
Sbjct: 939 VELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGAIADYNQAIKLNPNKPEA 998
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ G ++ + L++HP D
Sbjct: 999 YYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVVD 1031
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-- 100
+++ G+ + AI+ + ++L+PN PE Y G+A+ LG+++ A + + L P+
Sbjct: 971 VRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVV 1030
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D+ + ++ F V+ D A+ AI+ PK + A D + + +
Sbjct: 1031 DAYTQRGIVRFEVK--DIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLN 1088
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL---------SVIDL 211
++ +L P +DA + + G ++ L+ +++ P++A+ S+ D+
Sbjct: 1089 KVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDI 1148
Query: 212 LVAILMENNA 221
L AI NA
Sbjct: 1149 LSAIADFENA 1158
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG + Q G+F+ A+ E +R+ P YN LA LG+ A A +
Sbjct: 1240 LGNSRFQT--GDFQGAMRDFGETLRIHPKYVPAYNNRALALLKLGDFSGATTDCYQALKI 1297
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+PK + L + GD QA+ + +R P+ I ++ Y+++ +Y +A +
Sbjct: 1298 NPKYGLAYYNLGLIHTEMGDLEQAILDYNEVLRIYPRKIDAYVNRGLIYLKLKNYTQAIK 1357
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
+ P+ ++ +++ G+ I L + +++ L D ++
Sbjct: 1358 DQTSALNINPNLPHVYSFRSEGYIQLGEFKAGIDDLHKAAEIYQQQGKLEERDKMM 1413
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
GL +H A + Y A L + L+ Q G+ A+ ++A+ EPK
Sbjct: 867 GLIKLQKRDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNLKGAIENFKKALELEPK 926
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
D+ +L + YVE+G++ +A E + Q K+ + + + K G +I
Sbjct: 927 DLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGAIADYN 986
Query: 195 EYLKVHPS 202
+ +K++P+
Sbjct: 987 QAIKLNPN 994
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 113/289 (39%), Gaps = 23/289 (7%)
Query: 57 LKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG 116
L +V++L P + Y + LG+H+ A A L P ++ + Q G
Sbjct: 1087 LNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMG 1146
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
D A+ AIR PK + + GD A E++E ++ P+ +
Sbjct: 1147 DILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNR 1206
Query: 177 AQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVR 236
+ G ++ E ++++P+ A+ NN Q + +R
Sbjct: 1207 GFTKFRRGDIPGAMKDFEAAIQINPNYAEAY-----------NNLGNSRFQTGDFQGAMR 1255
Query: 237 FSGKELPLKLKV-----KAGICYLRLGNMEKA-----EILFADLQWKNAIDHADLI-TEV 285
G+ L + K + L+LG+ A + L + ++ A + LI TE+
Sbjct: 1256 DFGETLRIHPKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEM 1315
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAI 334
D ++ N L+ Y + +A + G +YLKL ++K++ A+
Sbjct: 1316 GDLEQAILDYNEVLRIYP-RKIDAYVNRGLIYLKLKNYTQAIKDQTSAL 1363
>gi|428777845|ref|YP_007169632.1| hypothetical protein PCC7418_3303 [Halothece sp. PCC 7418]
gi|428692124|gb|AFZ45418.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
PCC 7418]
Length = 1043
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +T + EA F+ AISL +++++L PN Y+ LG A +A+G+ +
Sbjct: 24 SNSQPQTSITHLHQEAETALVQKKFQNAISLCRQILKLDPNFALAYHNLGKALAAIGDLE 83
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+A + Y A L P + + L + +K A+ ++AI +P + +LA
Sbjct: 84 TAAETYQQAITLEPSSALAYANLGSIYAKKEKWQDALKCYQKAIELKPDLAGVYRNLARV 143
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATK--TGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ + ++A E+ E+ L P+ V + FLK GQ ++I + ++ P
Sbjct: 144 WERLDQPQQAVEARERAYSLEPNQVTPQQRLNLGDEFLKLGQIEKAIVSYQRAVEAAPQW 203
Query: 204 AD 205
A+
Sbjct: 204 AE 205
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK--DSALWK 106
++++ + + +E+V+ P E Y LG H G+ SA + Y A L P+ D+ LW
Sbjct: 925 DWDRCLIICEELVKHYPTHGEGYKLLGQVHYRKGDLSSALEAYSQAITLQPEELDARLWS 984
Query: 107 -QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
Q+L +G QA+ +QA++ + + + HL GD E A +Y
Sbjct: 985 GQIL---ASQGQWQQAIACYQQALQQDSQRWDVYHHLGEALEASGDVESAIMAY 1035
>gi|163798112|ref|ZP_02192049.1| TPR repeat [alpha proteobacterium BAL199]
gi|159176603|gb|EDP61180.1| TPR repeat [alpha proteobacterium BAL199]
Length = 618
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 6/230 (2%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V + G ++ G +A+ L+ V ++P +T LG+A+ A A D +
Sbjct: 37 VRALCGLGTIALGGGETARALELIGHAVAIAPTDGKTVGNLGVAYLAQNKLAEAEDCFRR 96
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L P AL T + +GD A A+ +A+ P R +L + G
Sbjct: 97 ALDLEPGQPALHANFATALLARGDRATALKAQSRAVELAPDSAVQRYNLGNLLAATGQTA 156
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
KAAE+Y + P +V A + L + G + +L+E L P + +L +
Sbjct: 157 KAAEAYGATLDIDPGHVGALNNLSVLHKQAGNLDEAEALLDEALLHDPMNPEL--LANHA 214
Query: 214 AILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
IL++ E+ L+ + A + L L L G L LG + +A
Sbjct: 215 DILLQRGQGERALETMRRAAGLAPGQATLRLAL----GSMLLELGRLSEA 260
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 2/186 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+L A G +A + + P N L + H GN A A P
Sbjct: 146 GNLLAATGQTAKAAEAYGATLDIDPGHVGALNNLSVLHKQAGNLDEAEALLDEALLHDPM 205
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L +Q+G +A+ +R+A P +LR+ L S +E+G +A +
Sbjct: 206 NPELLANHADILLQRGQGERALETMRRAAGLAPGQATLRLALGSMLLELGRLSEAGQELA 265
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH--PSDADLSVIDLLVAILME 218
+ P+N D ++L + Q + + +K+ PS A++ I+LL+
Sbjct: 266 AAMRGAPENADIALALSRLLRRQNQLDGAQAAADRAVKLSGKPSAAEVLAIELLLMRGRY 325
Query: 219 NNAYEK 224
+A+EK
Sbjct: 326 VDAWEK 331
>gi|338536124|ref|YP_004669458.1| hypothetical protein LILAB_32495 [Myxococcus fulvus HW-1]
gi|337262220|gb|AEI68380.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 271
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A+ KE + L P P+ + LGL ++ G + A A L +D+ +L
Sbjct: 95 EMAVEEYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAA 154
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ +GD A+ +++ +R EP + ++ L Y + G Y +A +YE+ + L P+++
Sbjct: 155 LMMDEGDYRSAITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYERARALNPEDL 214
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYL 197
+ LF G+ ++ L++ L
Sbjct: 215 LLNYNLSALFALWGRPKDAVQYLQKSL 241
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+L G++ AI+ LKEVVRL P+ E LG+ ++ G + A Y A L+P+
Sbjct: 153 AALMMDEGDYRSAITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYERARALNPE 212
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PK 134
D L L G A+ Y+++++ A+ PK
Sbjct: 213 DLLLNYNLSALFALWGRPKDAVQYLQKSLTADRPK 247
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
L + +NT G+ + G A + A L P + L T +K +A+
Sbjct: 10 LSDEHNTRGIELADRGWLDEAIKEFKKAIDLDPSSAHAHDNLATVYAEKKLFREALSEYL 69
Query: 127 QAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
A++ EP+ + +LA F + E A E Y++ +L P+ DA L G T
Sbjct: 70 TALKLEPESATAHYNLACF-LSTHAGEMAVEEYKEAIELDPEYPDA-------HLNLGLT 121
Query: 187 ARSIGILEEYLKVHPSDADLSVIDL-----LVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
G +EE ++ + +L D L A++M+ Y + ++ ++VR
Sbjct: 122 YADQGRVEEAMRELQTAIELDSQDAFPRHELAALMMDEGDYRSAITQLK--EVVRLEPDN 179
Query: 242 LPLKLKVKAGICYLRLGNMEKAE 264
+L + GICY + G +AE
Sbjct: 180 FEAQLDL--GICYAQKGFYAEAE 200
>gi|291392959|ref|XP_002712851.1| PREDICTED: intraflagellar transport 88 homolog [Oryctolagus
cuniculus]
Length = 831
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + LG H + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSRALSKLGELHDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I K FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHKKFPENVE 690
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 88/229 (38%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G++E+A KE +R + E +GL++ L A D ++ + + +
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLSEALDCFLKLHAILRNSAQV 555
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D QA+ ++ Q I P D L + GD +A + Y + +
Sbjct: 556 LYQIANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELHDSEGDKSQAFQYYYESYR 615
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 616 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 639
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A +++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 640 AIQYFERASLIQPT----QVKWQLMVASCFRRSGNYQKALDTYKDIHKK 684
>gi|443323912|ref|ZP_21052884.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442796295|gb|ELS05593.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 348
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 29 KLSPGVTKM-LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+ +P + ++ A+ Y+ GN+E AI+ V+RL+ + Y GLA + A
Sbjct: 113 RFNPDLERVYFDRATTYYSLGNYENAIADYSTVIRLNLGNEQAYYNRGLALYNAKEYDKA 172
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y L+P ++ + QA+ Q I+A +++ + A Y+
Sbjct: 173 IADYTQVISLNPNRLRVYNSRARAYQRLAQYDQAIADYSQVIKANSQNVEAYQNRAQLYI 232
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+G Y++A Y QI L P+N + A+++ Q ++I + +K++P +A
Sbjct: 233 SLGQYDQAIADYGQIISLNPNNPEGYYNRAEIYDDLKQYNKAIADYNKIIKLNPQNA 289
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 59 EVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY--VIAAHLSPKDSALWKQLLTFAVQKG 116
E VR +P+L Y + +LGN+++A Y VI +L + + + L + ++
Sbjct: 110 EYVRFNPDLERVYFDRATTYYSLGNYENAIADYSTVIRLNLGNEQAYYNRGLALYNAKEY 169
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
D A A Y Q I P + + A Y + Y++A Y Q+ K NV+A +
Sbjct: 170 DKAIADY--TQVISLNPNRLRVYNSRARAYQRLAQYDQAIADYSQVIKANSQNVEAYQNR 227
Query: 177 AQLFLKCGQTARSIGILEEYLKVHPSD 203
AQL++ GQ ++I + + ++P++
Sbjct: 228 AQLYISLGQYDQAIADYGQIISLNPNN 254
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 20/172 (11%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI+ +V+ L+PN YN+ A+ L + A Y + ++ ++
Sbjct: 169 YDKAIADYTQVISLNPNRLRVYNSRARAYQRLAQYDQAIADYSQVIKANSQNVEAYQNRA 228
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G QA+ Q I P + + A Y ++ Y KA Y +I KL P N
Sbjct: 229 QLYISLGQYDQAIADYGQIISLNPNNPEGYYNRAEIYDDLKQYNKAIADYNKIIKLNPQN 288
Query: 170 VDAT--------------------KTGAQLFLKCGQTARSIGILEEYLKVHP 201
A K A L+ + + + +L E K+ P
Sbjct: 289 AKAYYQRGLYYSYLENQDQAIADFKIAANLYEEANEVNKHQNVLNELAKLAP 340
>gi|171913931|ref|ZP_02929401.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
Length = 468
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 69/168 (41%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+ G + G +E+A+ + L P P YN GL ++LG + A + A
Sbjct: 167 LAGRGEARRNLGQYEKALEDFNASIELDPKNPGAYNNRGLTQASLGKREEAQADFNKAID 226
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L P + + G T A QA++ +P + A V G + A
Sbjct: 227 LLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKIDPAYTPALNNRAMLRVAEGSLKDAI 286
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ +I +L PDNV A A + K GQ +++ L+ +K+ P D
Sbjct: 287 ADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALADLDTAIKLAPQDG 334
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K+ P T L A L+ A G+ + AI+ E++RL P+ YN A+ G + A
Sbjct: 260 KIDPAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKA 319
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI 136
A L+P+D K L V +G +A+ A P+D+
Sbjct: 320 LADLDTAIKLAPQDGQTHKNLAIAYVNRGRWDEALKEFTTASSLLPEDV 368
>gi|357144204|ref|XP_003573209.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
[Brachypodium distachyon]
Length = 1064
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 134/286 (46%), Gaps = 25/286 (8%)
Query: 115 KGDTAQAMYYIRQAIRA--EPKDISLR-IHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
KGD A Y +++ +P+D L + L ++ GD++++ S+E++ ++ P+N +
Sbjct: 328 KGDIETAGRYYIASVKEINKPQDFVLPFVGLGQIQLKFGDFKRSLASFEKVLEVHPENCE 387
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
+ K ++ G+ ++I ++ ++ P D V L +L+E++ + +++++
Sbjct: 388 SLKAIGNIYANLGENDKAIETFKKVTRIDPKDHQAFV--ELGELLVESD-WAAAMEYLKT 444
Query: 232 AQ-IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLIT----EVA 286
A+ +++ +G++ P++L G+ Y EKAE A+ +K A+ ++ V
Sbjct: 445 ARTLLKKAGEKTPVELLNGIGLLYF-----EKAEFELAEQSFKEALGDGIWLSIMDWSVG 499
Query: 287 DTLMSLGHSNSALKYYHFLETNA----GTDNGYLYLKLAECYLSLKERAHAIMFFYKALD 342
+++S ++H LE D A L + A + + +
Sbjct: 500 SSMVSWSVQYRDQSFFHELEERVPLELPCDKVTTLFNYARLLEELHDTVKASLLYRLIIF 559
Query: 343 RFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSN 388
++ D IDA L LA++ E+ + +I L+ D+L +NS N
Sbjct: 560 KYADYIDAYLRLAAIAKEKNNIQLSIELIG-----DALKINSKYPN 600
>gi|340350084|ref|ZP_08673085.1| hypothetical protein HMPREF9419_1317 [Prevotella nigrescens ATCC
33563]
gi|339609567|gb|EGQ14437.1| hypothetical protein HMPREF9419_1317 [Prevotella nigrescens ATCC
33563]
Length = 575
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
K N + EA Q GN A LL+ ++PN PE Y L + + N
Sbjct: 26 KAQTNSQTTRYNYFFLEAIRQQEMGNLAAAFDLLRHARDINPNAPEVYYELAGYYVEMQN 85
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAM-YYIRQAIRAEPKDISLRIHL 142
+K+A + AA L+P +S ++L F + + D QA+ Y + + ++ L+I L
Sbjct: 86 NKAARYNFERAAELAPNNSTYLEKLGQFYITQNDYEQALAAYEKLYANNKTREDVLQI-L 144
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
Y DY+K E E+++ L + + T Q+F + G ++ L ++ +P
Sbjct: 145 YQLYGSQNDYKKMIEVTERMETLLGSSEQLSLTKMQIFEQMGDKRKAQAELMRLVQKNPL 204
Query: 203 DADLSVIDLLVAILMENN 220
D + V +L L +NN
Sbjct: 205 DLNYRV--MLGNWLFQNN 220
>gi|409408369|ref|ZP_11256804.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
gi|386431691|gb|EIJ44519.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
Length = 691
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V + L +A + G QA +V+++ P P+ + LGL A G A D Y+
Sbjct: 3 VEEALRQAYAHWNAGQAPQAEQRCLQVLQVLPGQPDALHLLGLIAHAYGKPDLAID-YLR 61
Query: 94 AAHLSPKDSALWKQ-LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
A L P AL++ L QKG A+A + R+A EP+ ++ +L E G +
Sbjct: 62 QACLPPTAPALYRSNLAEMCRQKGLLAEAEQHARRATEQEPQLVAAWSNLGIILQESGKF 121
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E + E++ L P+N + F++ G+ ++ L +HPS A+
Sbjct: 122 EAGLQCLERVAALQPENAEVFNNLGNTFVRLGRLDQAQESYARALTLHPSYAE 174
>gi|328699992|ref|XP_003241117.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Acyrthosiphon pisum]
gi|328699994|ref|XP_003241118.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 3 [Acyrthosiphon pisum]
gi|328699996|ref|XP_003241119.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 4 [Acyrthosiphon pisum]
gi|328699998|ref|XP_001952129.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Acyrthosiphon pisum]
Length = 1108
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSP 65
YG K ++ + + K + N + + A + Y G FE+AIS K+ + ++P
Sbjct: 227 YGKLLLKLNRIKEAKKHFKIANNCATECPDTLKNLADVYYLIGKFEKAISKYKKALEINP 286
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL-LTFAVQKGDTAQAMYY 124
+L Y LG+AH + ++A + ++ A L P++ ++ + L +T+ Q+ Y
Sbjct: 287 DLINAYFYLGMAHLKVTEFQNAANIFLKALELEPENVSVLRSLAVTYCFQENMLLCVEVY 346
Query: 125 IRQAIRAEPKDISLRIHLASFYV-EIGDYEKAAESYEQIQKLFPDNVDATKT 175
++ ++ +P+ +L + LA Y+ + +Y++A ++ +L P+ +D K
Sbjct: 347 -KKCLKLQPEAFNLNLELALIYLHNLQNYQEAVIYLKKCIQLNPNRIDLFKN 397
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 28/252 (11%)
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
QK + ++ + P D+++ + A + G+YEK + E + P+ +
Sbjct: 97 QKRNFITTQKICKELLTHTPTDLNVILLNAESFFNCGNYEKCIDCLEIANNINPNCSEVL 156
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHP---------SDADLSVIDLLVAILMENNAYEK 224
A +++K + + L + + P +D DL+ A L AYE+
Sbjct: 157 SNFALVYMKKSENDLAKEYLFKVCTIKPFCVDAWTDYADFLFKTNDLITAEL----AYER 212
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
L S K K+ K G L+L +++A+ F + A + D +
Sbjct: 213 VL-----------SLKPELYKVHNKYGKLLLKLNRIKEAKKHFK-IANNCATECPDTLKN 260
Query: 285 VADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
+AD +G A+ KY LE N N Y YL +A +L + E +A F KAL+
Sbjct: 261 LADVYYLIGKFEKAISKYKKALEINPDLINAYFYLGMA--HLKVTEFQNAANIFLKALEL 318
Query: 344 FEDNIDARLTLA 355
+N+ +LA
Sbjct: 319 EPENVSVLRSLA 330
>gi|188996284|ref|YP_001930535.1| hypothetical protein SYO3AOP1_0336 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931351|gb|ACD65981.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 557
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 45/293 (15%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF-------------- 88
L Y+ G E+A LLK N PETY L ++ N K A
Sbjct: 71 LAYSLGKKEEAFELLKTYKERFKNDPETYLFLSFFYNVTKNQKEALAVLEEGYKKFQNNE 130
Query: 89 -------DFYVIAAHLS-------------PKDSALWKQLLTFAVQKGDTAQAMYYIRQA 128
D Y+ +L+ D +++ ++ + + + +A Y++++
Sbjct: 131 KIISALIDQYIENKNLNKAKELLEKLATIKKDDPSIYYKIARIYLFENNAQKAEEYLKKS 190
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
++ + K + L Y + G+Y+KA E Y+ I K P+N++A Q+++
Sbjct: 191 LQIDKKYKPVWQLLGEIYRQSGNYDKAIEIYKNILKDDPNNLEALNRLFQIYVDKDDFNN 250
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLK--L 246
+ +++ ++++P D D AIL + Y K + E Q ++ S +E P L
Sbjct: 251 AAETIDKIIRLNPKDND--------AILKKFLLYIKYGKSNEILQDLKKSSQENPDNPFL 302
Query: 247 KVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSAL 299
K G+ Y L + + A+ ++ +L +K D+ +LI + ++L + AL
Sbjct: 303 KFMLGMAYETLEDYQNAKAIYEEL-YKQQPDNQELIDRLVSVYLNLKEYDKAL 354
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 180/429 (41%), Gaps = 50/429 (11%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N +A LL+++ + + P Y + + N + A ++ + + K +W+ L
Sbjct: 145 NLNKAKELLEKLATIKKDDPSIYYKIARIYLFENNAQKAEEYLKKSLQIDKKYKPVWQLL 204
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
Q G+ +A+ + ++ +P ++ L YV+ D+ AAE+ ++I +L P
Sbjct: 205 GEIYRQSGNYDKAIEIYKNILKDDPNNLEALNRLFQIYVDKDDFNNAAETIDKIIRLNPK 264
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
+ DA L++K G +S IL++ K + D + ++ + AYE TL+
Sbjct: 265 DNDAILKKFLLYIKYG---KSNEILQDLKKSSQENPDNPFLKFMLGM-----AYE-TLED 315
Query: 229 IEHAQ-IVRFSGKELP--LKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEV 285
++A+ I K+ P +L + YL L +KA + L +N D+ L++ +
Sbjct: 316 YQNAKAIYEELYKQQPDNQELIDRLVSVYLNLKEYDKALEILNKLYVQNPKDYKILLS-M 374
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKL-------------AECYLSLKER-- 330
AD G+ AL+ E+ A D ++K Y SL+ R
Sbjct: 375 ADIEDKKGNIKRALELVKEAESIAPDDPTVHFIKAIYLDKLGNWQEAEKSLYKSLELRPD 434
Query: 331 -AHAIMFF-YKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSN 388
A+ + Y +DR E NID + L LE+ + P LDSL K
Sbjct: 435 YPDALNYLGYTYIDR-EINIDKGIELVKKALEK--------MPDSPAYLDSLGWGYYKKG 485
Query: 389 PWWLNEKIIMKLCHIYRAKGMPED------FVDAIFPLVCESLCVEALRQKVKVKRRLTK 442
+ EK+I K MP+D + D + L + VE ++ +++ + +
Sbjct: 486 NYTEAEKLIKKALE-----KMPDDPVLNEHYADILLKLNKKQDAVEYYKKALELIDKKGE 540
Query: 443 GILQQRTKI 451
G Q+ ++
Sbjct: 541 GEPNQKERV 549
>gi|255716078|ref|XP_002554320.1| KLTH0F02508p [Lachancea thermotolerans]
gi|238935703|emb|CAR23883.1| KLTH0F02508p [Lachancea thermotolerans CBS 6340]
Length = 1055
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
K +R + L P V ++L EA+ + + + A L EV++ Y TLG +
Sbjct: 137 KAPKRNVRERVLDPEVAQLLSEANEAFVRNDIQVAEHLYNEVIKKDVKNFAAYKTLGDIY 196
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
G + + +AAHL+P D WK + T + G QA+Y +A+R D
Sbjct: 197 QLQGRFNDCCNSWFLAAHLNPSDWEFWKVVATLSSDLGHIRQAIYCYTRALRMNSDDWEC 256
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
+ Y + +A E ++++ P + + + A L++ + +I E Y+K
Sbjct: 257 LYGRSILYKKTNQLGRALEGFQRLHNNNPYDGNLLRELAILYVDYNRINEAI---ELYIK 313
Query: 199 VHPSDA 204
+ ++
Sbjct: 314 IFEANV 319
>gi|405375533|ref|ZP_11029563.1| TPR repeat protein [Chondromyces apiculatus DSM 436]
gi|397086260|gb|EJJ17390.1| TPR repeat protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 271
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A+ KE + L P P+ + LGL ++ G + A A L +D+ +L
Sbjct: 95 EMAVEEYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAA 154
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ +GD A+ +++ +R EP + ++ L Y + G Y +A +YE+ + L P+++
Sbjct: 155 LMMDEGDYRSAITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYERARALNPEDL 214
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYL 197
+ LF G+ ++ L++ L
Sbjct: 215 LLNYNLSALFALWGRPKDAVQYLQKSL 241
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+L G++ AI+ LKEVVRL P+ E LG+ ++ G + A Y A L+P+
Sbjct: 153 AALMMDEGDYRSAITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYERARALNPE 212
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PK 134
D L L G A+ Y+++++ A+ PK
Sbjct: 213 DLLLNYNLSALFALWGRPKDAVQYLQKSLTADRPK 247
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
L + +NT G+ + G A + A L P + L T +K A+
Sbjct: 10 LSDEHNTRGIELADRGWLDEAIKEFKKAIDLDPSSAHAHDNLATVYAEKKLFRDALSEYL 69
Query: 127 QAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
A++ EP+ + +LA F + E A E Y++ +L P+ DA L G T
Sbjct: 70 TALKLEPESATAHYNLACF-LSTHAGEMAVEEYKEAIELDPEYPDA-------HLNLGLT 121
Query: 187 ARSIGILEEYLKVHPSDADLSVIDL-----LVAILMENNAYEKTLQHIEHAQIVRFSGKE 241
G +EE ++ + +L D L A++M+ Y + ++ ++VR
Sbjct: 122 YADQGRVEEAMRELQTAIELDSQDAFPRHELAALMMDEGDYRSAITQLK--EVVRLEPDN 179
Query: 242 LPLKLKVKAGICYLRLGNMEKAE 264
+L + GICY + G +AE
Sbjct: 180 FEAQLDL--GICYAQKGFYAEAE 200
>gi|387132708|ref|YP_006298680.1| hypothetical protein PIN17_A0752 [Prevotella intermedia 17]
gi|386375556|gb|AFJ08372.1| tetratricopeptide repeat protein [Prevotella intermedia 17]
Length = 559
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
K N S EA Q GNF A LL+ + ++PN PE Y + + + N
Sbjct: 10 KAQTNSQSTRYNYFFLEAIRQQEMGNFAAAFDLLRHALDINPNAPEVYYEIAGYYIDMQN 69
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAM-YYIRQAIRAEPKDISLRIHL 142
K+A ++ AA L+P + A ++L F + + + QA+ Y R + ++ L+I L
Sbjct: 70 GKAARYYFEKAAELAPDNPAYLEKLGQFYISQANYEQALAAYERLYANNKTREDVLQI-L 128
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
Y +Y+K E E+++ L + + T Q+F + G ++ L ++ +P
Sbjct: 129 YQLYGSQNNYKKMIEVIERMEMLLGSSEQLSLTKMQIFEQMGDKRKAQAELMRLVQKNPL 188
Query: 203 DADLSVI 209
D + ++
Sbjct: 189 DLNYRIM 195
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 42/204 (20%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
+ +GN +AFD A ++P ++ ++ + + + A YY +A P
Sbjct: 27 AIRQQEMGNFAAAFDLLRHALDINPNAPEVYYEIAGYYIDMQNGKAARYYFEKAAELAPD 86
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+ + L FY+ +YE+A +YE +L+ +N KT
Sbjct: 87 NPAYLEKLGQFYISQANYEQALAAYE---RLYANN----KTRE----------------- 122
Query: 195 EYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPL-KLKVKAGIC 253
V+ +L + N Y+K ++ IE +++ S ++L L K+++
Sbjct: 123 ------------DVLQILYQLYGSQNNYKKMIEVIERMEMLLGSSEQLSLTKMQI----- 165
Query: 254 YLRLGNMEKAEILFADLQWKNAID 277
+ ++G+ KA+ L KN +D
Sbjct: 166 FEQMGDKRKAQAELMRLVQKNPLD 189
>gi|218887372|ref|YP_002436693.1| hypothetical protein DvMF_2283 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758326|gb|ACL09225.1| TPR repeat-containing protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 186
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL 81
R+ N + P LG A++ GN E A+ L ++ + N ++ +GL
Sbjct: 31 RKAAGSNGVHP--DPYLGLATIAVQRGNLEAALVLYRKAANIEAN-DKSLAGMGLVEMET 87
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
G H AFD +V A ++P + LL G + + ++R + P+ ++R
Sbjct: 88 GAHAEAFDHFVAALGMNPGNLVAMNGLLRLGYHLGRIEEVVAHLRAFLELSPEKDNVRFS 147
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
LA + +G ++A E I PD+ DA
Sbjct: 148 LAGCLISLGRKDEARAELEVILDRAPDHADA 178
>gi|427733983|ref|YP_007053527.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rivularia sp. PCC 7116]
gi|427369024|gb|AFY52980.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rivularia sp. PCC 7116]
Length = 832
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 35 TKMLGEASLQ-YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
TK L + +LQ + G FE AI+ ++++ ++PN E Y +L A GN ++A Y
Sbjct: 11 TKYLIKIALQKHHSGQFEAAITYYQQILEINPNFAEVYASLAEAQEKAGNSEAAITSYQQ 70
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A +L P+ + + L ++G + A+ ++A++ +P + + +L + + G+
Sbjct: 71 AINLKPEYAEAYCNLGNLFKKQGKVSAAIESYQKALKIKPDLVEVYCNLGNLLKKQGNRS 130
Query: 154 KAAESYEQIQKLFPD 168
A ESY++ K+ P+
Sbjct: 131 AAIESYQKALKIKPN 145
>gi|323449294|gb|EGB05183.1| hypothetical protein AURANDRAFT_54803 [Aureococcus anophagefferens]
Length = 897
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V +L ++ + NF ++I ++ +R+ P + E Y+ L A LG+ + A FY+
Sbjct: 13 VDNLLLLGAINFQLRNFSESIFYNQQAIRIEPQMAEAYSNLANALKELGDVRGAMQFYLK 72
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A P+ + L + + G T A+ + + +P + +L + + G
Sbjct: 73 AIKCKPRFGDAYNNLASAHMHLGQTNDAIETFQMGLVIDPGLVDAHCNLGNLFKAQGKLA 132
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
A Y + +L P A A +F GQ + +I E +++ P AD+
Sbjct: 133 AARRCYLEAIRLNPGFAIAWSNLAGIFKDEGQLSTAIAYYREAIRLCPPFADV 185
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 67/165 (40%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS G AI + + + P L + + LG A G +A Y+ A L+P
Sbjct: 88 ASAHMHLGQTNDAIETFQMGLVIDPGLVDAHCNLGNLFKAQGKLAAARRCYLEAIRLNPG 147
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L +G + A+ Y R+AIR P + +L S E G++ +A + Y+
Sbjct: 148 FAIAWSNLAGIFKDEGQLSTAIAYYREAIRLCPPFADVYSNLGSAMQEQGNFVEARQCYQ 207
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+L PD A L ++ L +++ P+ D
Sbjct: 208 TAIRLRPDFAIAHGNLGSCLLASNDAKGAVRALRHAVQLEPNFPD 252
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A+ L+ V+L PN P+ YN LG A + A Y A HL P + L
Sbjct: 236 AVRALRHAVQLEPNFPDAYNNLGNALRKT-FMREAISCYRTALHLKPDHPHAYSNLGNAM 294
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
+G +A++ A R P +L S E G ++A Y Q L PD +A
Sbjct: 295 RDRGLVREAIHCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALDPDFAEA 354
Query: 173 -TKTGAQL--FLKCGQTARSI 190
T G L +KC TA I
Sbjct: 355 YTNLGNALDDAIKCYTTALKI 375
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 8/157 (5%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+AIS + + L P+ P Y+ LG A G + A V AA L P + L
Sbjct: 266 MREAISCYRTALHLKPDHPHAYSNLGNAMRDRGLVREAIHCNVTAARLMPHFAPAHANLG 325
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD-YEKAAESYEQIQKLFPD 168
+ ++G QA+ + QAI +P A Y +G+ + A + Y K+ P
Sbjct: 326 SLLREQGQLDQALAHYHQAIALDPD-------FAEAYTNLGNALDDAIKCYTTALKIAPG 378
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+A A + G +I E L + P D
Sbjct: 379 LAEAHAALAAVHGDGGNYEDAIMCYERALALRPHFPD 415
>gi|392374838|ref|YP_003206671.1| hypothetical protein DAMO_1782 [Candidatus Methylomirabilis
oxyfera]
gi|258592531|emb|CBE68840.1| protein of unknown function [Candidatus Methylomirabilis oxyfera]
Length = 563
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 20 RGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS 79
R + G +L P +L ++QY +E A + + + +R++ + P T+ LG+ H
Sbjct: 320 RPEQPGHPVRLVPWAPWLL-MGTVQYKLQQYEAARNSVCQAIRVNADFPGTHTLLGVIHL 378
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
A+G +A + + A L +L+ + Q GD+ +AM R+A+ EP+ + R
Sbjct: 379 AMGRPDAALEAFETAHRLGDTTPSLFVNIGAAHNQLGDSEKAMQAFREALAGEPELQNAR 438
Query: 140 IHLASFYVEIGDYEKAAE 157
+ L Y ++G + + E
Sbjct: 439 LGLCQAYAQLGRWSELVE 456
>gi|46562211|ref|YP_009076.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46447748|gb|AAS94414.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
Length = 915
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 5/191 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS Q A G+ A + + L P L A G A + A +P
Sbjct: 401 ASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRLKQADGRPDEALEDLKAAVVAAPD 460
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D A+ L + + +GDT + + + + +R P+D L L YV +GD K ++
Sbjct: 461 DLAVRNALFAYHLGRGDTGKGVQVVLEGLRGTPQDAILYTMLVPVYVNMGDEAKGLDAVA 520
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD-----ADLSVIDLLVAI 215
Q + PD DA G +L G+ +++ E YL P A +++DLL
Sbjct: 521 QAHRADPDFPDAYLAGLRLHAGAGRAEQALAESEAYLARKPDAPGFLLASGALLDLLGRT 580
Query: 216 LMENNAYEKTL 226
+ ++K L
Sbjct: 581 AEADARFDKAL 591
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 112/309 (36%), Gaps = 32/309 (10%)
Query: 21 GRRKGSKNKLSPG-------VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNT 73
G R G++ G V +L + L+ A G ++A+ LK V +P+ N
Sbjct: 408 GDRAGAERSFEAGLALQPAHVPALLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNA 467
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
L H G+ + +P+D+ L+ L+ V GD A+ + + QA RA+P
Sbjct: 468 LFAYHLGRGDTGKGVQVVLEGLRGTPQDAILYTMLVPVYVNMGDEAKGLDAVAQAHRADP 527
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
+ + G E+A E PD L G+TA +
Sbjct: 528 DFPDAYLAGLRLHAGAGRAEQALAESEAYLARKPDAPGFLLASGALLDLLGRTAEADARF 587
Query: 194 EEYLKVHPSDADLSVIDLLVAILMENNA---YEKTLQHIEHAQIVRFSGKELPLKLKVKA 250
++ L + +V + VA + A E+ L+ +H Q L+
Sbjct: 588 DKALAANDPRVSFAVAERAVASGQDEKARRVLEEALR--QHDQTT----------LRDAL 635
Query: 251 GICYLRLGNMEKAEILFADLQWKNA----------IDHADLITEVADTLMSLGHSNSALK 300
I R+G + A L+ ++ + + H D E ADT LG SA
Sbjct: 636 AIQLARMGKPDDALALYTAIETQRPREALLGRYRLLTHLDRHQEAADTARELGRRESASP 695
Query: 301 YYHFLETNA 309
LE A
Sbjct: 696 LPVLLEAAA 704
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++ A SL + V + P+L E Y LG+A G+ ++A + +P+ A +
Sbjct: 308 DYTLAASLFQRSVAMRPSL-EGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMT 366
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+T + + A+A ++ + P D + LAS + GD A S+E L P
Sbjct: 367 VTILLAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPA 426
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
+V A ++L G+ ++ L+ + P DL+V + L A + K +Q
Sbjct: 427 HVPALLQLSRLKQADGRPDEALEDLKAAVVAAPD--DLAVRNALFAYHLGRGDTGKGVQV 484
Query: 229 I 229
+
Sbjct: 485 V 485
>gi|406935176|gb|EKD69225.1| hypothetical protein ACD_47C00214G0001, partial [uncultured
bacterium]
Length = 1290
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
E+A+ K + ++P Y +G +S +GN A + A + KD + +
Sbjct: 2 LEEAMRHFKSALDIAPKNSRAYFEMGRTYSDMGNGSEALVLFRNAIEENAKDYRSYLGMA 61
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
Q+G ++A+ +++A+ EP + +HL + Y E+ DY++A E Y++
Sbjct: 62 LILKQQGAVSEAILMMKKALEIEPDFVECIMHLGAVYYELEDYKRALECYQKAPA----- 116
Query: 170 VDATKTGAQLFLKCG 184
+DAT+ A LKCG
Sbjct: 117 IDATEIDA--VLKCG 129
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 158/394 (40%), Gaps = 62/394 (15%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A NF A + K+V+ L P + L + N++ A ++ A LSP +
Sbjct: 408 ALSNFAGAAAGFKKVIELQPANKDALIKLARLKKSNANYEEATTLFMKALELSPDMPEIT 467
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
++ + +A+ Y + + +EPK++ ++LA +G+ A YE++ ++
Sbjct: 468 LEIGECLMNARRLPEAVSYFLKLLSSEPKNVRALLNLARIKETLGETNNAFSFYERLYEV 527
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
+NVDA A++ GQ +++ + + LK+ P D +++ L I M+
Sbjct: 528 DENNVDARLGMAKILYSRGQLDKAMFLYQGALKMRPDSLD--ILNALSEIYMK------- 578
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEV 285
L+H A G+ + EIL K+ + + +
Sbjct: 579 LKHEPEA-----------------LGVFH---------EIL------KSEPKNTGAMLNL 606
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
A S ALKYY L G+ Y + A Y L E A+AI ++ +A+
Sbjct: 607 AKLYRSRAQYGEALKYYLEL--------GFDY-EAASVYKELGETANAITYYDRAVKADP 657
Query: 346 DNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYR 405
N AR+ L L++ K EA+ L+ ++M D + +L+ + + R
Sbjct: 658 SNASARVEAGELYLKQKKYAEALKHLNV-----VIEMKPDSFHAHYLSGLVNFEQGLYER 712
Query: 406 AKGMPEDFV-------DAIFPLVCESLCVEALRQ 432
A+G E V D+ F L VE Q
Sbjct: 713 ARGEFEQCVKIDGTSSDSFFYLAESHYNVENYAQ 746
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V LG A + Y+ G ++A+ L + +++ P+ + N L + L + A +
Sbjct: 532 VDARLGMAKILYSRGQLDKAMFLYQGALKMRPDSLDILNALSEIYMKLKHEPEALGVFHE 591
Query: 94 AAHLSPKDS-------------ALWKQLLTFAVQKG-------------DTAQAMYYIRQ 127
PK++ A + + L + ++ G +TA A+ Y +
Sbjct: 592 ILKSEPKNTGAMLNLAKLYRSRAQYGEALKYYLELGFDYEAASVYKELGETANAITYYDR 651
Query: 128 AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
A++A+P + S R+ Y++ Y +A + + ++ PD+ A + + G
Sbjct: 652 AVKADPSNASARVEAGELYLKQKKYAEALKHLNVVIEMKPDSFHAHYLSGLVNFEQGLYE 711
Query: 188 RSIGILEEYLKVHPSDAD 205
R+ G E+ +K+ + +D
Sbjct: 712 RARGEFEQCVKIDGTSSD 729
Score = 38.9 bits (89), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 140/369 (37%), Gaps = 81/369 (21%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y N+E+A + L + +++ P + Y G + N +A D Y+ ++P+
Sbjct: 301 AEIDYGRKNYEEAQTALNKYIKIKPGDFKAYLLNGNCAKKMNNFDAAVDNYMKCRDIAPE 360
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
S + + L Y ++ E A +
Sbjct: 361 YS----------------------------------EVNMALGGLYFDLHKEELALTCFN 386
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
++ + P NV+A AQ L A + ++ +++ P++ D ++I L A L ++N
Sbjct: 387 KVLEKEPFNVNANYMSAQSMLALSNFAGAAAGFKKVIELQPANKD-ALIKL--ARLKKSN 443
Query: 221 AYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHAD 280
A N E+A LF + + D +
Sbjct: 444 A-------------------------------------NYEEATTLFMK-ALELSPDMPE 465
Query: 281 LITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
+ E+ + LM+ A+ Y+ L ++ N L LA +L E +A F+ +
Sbjct: 466 ITLEIGECLMNARRLPEAVSYFLKL-LSSEPKNVRALLNLARIKETLGETNNAFSFYERL 524
Query: 341 LDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKL 400
+ E+N+DARL +A +L + ++A+ L +L M D + +I MKL
Sbjct: 525 YEVDENNVDARLGMAKILYSRGQLDKAMFLYQ-----GALKMRPDSLDILNALSEIYMKL 579
Query: 401 CHIYRAKGM 409
H A G+
Sbjct: 580 KHEPEALGV 588
>gi|169832341|ref|YP_001718323.1| hypothetical protein Daud_2204 [Candidatus Desulforudis audaxviator
MP104C]
gi|169639185|gb|ACA60691.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 191
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 52/85 (61%)
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
D A+++ + + ++ P D+ RIHLA+ Y + DYE++ + +E++ L DN
Sbjct: 52 DFARSVRQLEKQVQDNPGDVQSRIHLAAIYRNMMDYERSIQLFEEVLALEADNQRVRLDL 111
Query: 177 AQLFLKCGQTARSIGILEEYLKVHP 201
A+++L+ G+ ++IG LE L+++P
Sbjct: 112 AEMYLQLGEHEQAIGQLEALLEINP 136
>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
9303]
gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
9303]
Length = 725
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 157/397 (39%), Gaps = 36/397 (9%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E A+ + +E ++ + +PET+ A +G + A Y A L+P +
Sbjct: 88 GQHENAVGVFQEALKRNQQIPETWFCFANALREIGKTEEAKQAYRNALQLNPAHAGAAGN 147
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ +A +A+ P +++LRI+ E ++ A Y+ L P
Sbjct: 148 LGALLTDDGELDEAEQLFVKAVDQYPNNVNLRINYGRLLAEKAEHAAAIMQYQIALPLAP 207
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ + A + G +I + ++V P AD L ++ E E+ +
Sbjct: 208 QSPELHYNFANALKEEGDVEEAIASYRKAIEVKPDFADAYFA--LGLVMKEEGDVEEAIA 265
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EKAEILFADLQWKNAI----DHADL 281
A +++K Y LG + E+ ++ A ++ AI D AD
Sbjct: 266 SYRKA-----------IEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADA 314
Query: 282 ITEVADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLKLAECYLSLKERA---HAIMFF 337
+ + G A+ Y +E + Y L L +KE AI +
Sbjct: 315 YFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLV-----MKEEGDVEEAIASY 369
Query: 338 YKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWW--LNEK 395
KA++ D DA L L ++L EE + +EA +++ + + S + + W + +K
Sbjct: 370 RKAIEVKPDFADAYLNLGNVLKEEGEIDEARQIITTLRQMKSFEKET------WTRIQDK 423
Query: 396 IIMKLCHIYRAKGMPEDFVDAIFPLVCESLCVEALRQ 432
++ H RA G+ A F + + C+ A++Q
Sbjct: 424 TLVFDWHHRRALGLLWQVELAAFSGMEPASCLPAVKQ 460
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 3/195 (1%)
Query: 14 RKLNKKRGRRKGSKN--KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPET 70
R++ K ++ +N +L+P G +L G ++A L + V PN
Sbjct: 119 REIGKTEEAKQAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEQLFVKAVDQYPNNVNL 178
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
G + H +A Y IA L+P+ L ++GD +A+ R+AI
Sbjct: 179 RINYGRLLAEKAEHAAAIMQYQIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAIE 238
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
+P L E GD E+A SY + ++ PD DA + + G +I
Sbjct: 239 VKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAI 298
Query: 191 GILEEYLKVHPSDAD 205
+ ++V P AD
Sbjct: 299 ASYRKAIEVKPDFAD 313
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 127/332 (38%), Gaps = 28/332 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +QA+ L++ +R + P + LG + G H++A + A + + W
Sbjct: 54 GQHQQAVELIQASIREDESNPIPFFNLGKILAIAGQHENAVGVFQEALKRNQQIPETWFC 113
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G T +A R A++ P +L + + G+ ++A + + + +P
Sbjct: 114 FANALREIGKTEEAKQAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEQLFVKAVDQYP 173
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+NV+ +L + + A +I + L + P +L L E E+ +
Sbjct: 174 NNVNLRINYGRLLAEKAEHAAAIMQYQIALPLAPQSPELHYN--FANALKEEGDVEEAIA 231
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM--EKAEILFADLQWKNAI----DHADL 281
A +++K Y LG + E+ ++ A ++ AI D AD
Sbjct: 232 SYRKA-----------IEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADA 280
Query: 282 ITEVADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLKLAECYLSLKERA---HAIMFF 337
+ + G A+ Y +E + Y L L +KE AI +
Sbjct: 281 YFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLV-----MKEEGDVEEAIASY 335
Query: 338 YKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
KA++ D DA L ++ EE EEAI
Sbjct: 336 RKAIEVKPDFADAYFALGLVMKEEGDVEEAIA 367
>gi|399025669|ref|ZP_10727659.1| tetratricopeptide repeat protein [Chryseobacterium sp. CF314]
gi|398077642|gb|EJL68610.1| tetratricopeptide repeat protein [Chryseobacterium sp. CF314]
Length = 271
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+ S L + ++ YN LG A LG SAF Y A +P +A++ L +
Sbjct: 38 EEQYSKLAQSEKIQQIQSSYYNYLGTAQRRLGKTTSAFKSYESALKANPMSAAVYANLGS 97
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
QKG+ A+ Y+ + ++ EP++ + + + Y +G + AA+ QI PDN+
Sbjct: 98 IHGQKGNKQAALDYLNKGLQIEPENADMYLTRSKVYENLGKKDLAAKDLNQILSFAPDNI 157
Query: 171 DATKTG 176
A +TG
Sbjct: 158 YA-RTG 162
>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
Length = 463
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-- 105
G +E+A++ + L P +N G+A SALG ++ A Y + + P + W
Sbjct: 46 GRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEIDPDYAPAWNN 105
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ ++ A+ +GD A Y +A+ +P + + GDY ++ E YE+ ++
Sbjct: 106 RGVVLEALGRGDEALESY--DRALEVDPAYALAWSNQGGVFYSRGDYNRSIECYERALEI 163
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
P + +A + G+ RSI +E LK+ P
Sbjct: 164 DPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDP 199
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G E+A++ + + P+ +N G+ ALG A + Y A + P + W
Sbjct: 78 ALGRNEEALACYNRSLEIDPDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAW 137
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+GD +++ +A+ +P+ +L G+YE++ E Y++ K+
Sbjct: 138 SNQGGVFYSRGDYNRSIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKI 197
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
P A G+ ++ EE LK+ PS
Sbjct: 198 DPLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPS 234
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS-A 103
+A G +E++I E +++ P +N G+A LG H+ A D Y A + P A
Sbjct: 179 FAAGEYERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPSHVMA 238
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L+ + + + G +A+ ++ +P + +G E+AA SY++
Sbjct: 239 LYNKGIALGL-LGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLLGRQEQAAASYDEAL 297
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
KL P A G+ ++ + L++ P+
Sbjct: 298 KLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPA 336
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 62/152 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A+ V+++ P+ P + G+A LG + A Y A L P + W
Sbjct: 250 GRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLLGRQEQAAASYDEALKLDPGYAQAWNN 309
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ ++A+ +P + + +G Y++A SY++ +L P
Sbjct: 310 RGIALGSLGRQEEALQSYQRALEIDPAYSQAWYNQGVAFSALGRYQEAISSYDRALELDP 369
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
+ +A G+ +I E L+V
Sbjct: 370 ELSEAWNNKGIALSALGRHQEAIECYERALEV 401
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
A G +++AIS + L P L E +N G+A SALG H+ A + Y
Sbjct: 350 ALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECY 395
>gi|237742895|ref|ZP_04573376.1| O-linked glcnac transferase [Fusobacterium sp. 4_1_13]
gi|229430543|gb|EEO40755.1| O-linked glcnac transferase [Fusobacterium sp. 4_1_13]
Length = 800
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 135/334 (40%), Gaps = 32/334 (9%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
YG++ +A LLK ++ S N Y+ LG G + A + Y A L+ D+ ++
Sbjct: 160 YGHYTEAEELLKNMINKSKNDEWLYSELGYCLVEQGRQEEALESYFKAIELNRNDAWIFT 219
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
++ +A+ Y +A+ + DI + LA Y +G++EKA + E++++L
Sbjct: 220 RIGMCYKNMDKKEEAIEYYLKALELKEDDIFIMSDLAWLYDSLGEFEKALKYLERLEELG 279
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-NAYEKT 225
++ K + +I + L+ D D + I + + Y++
Sbjct: 280 ENDAWTNTEYGYCLSKLKRFDEAIVKINRALEAEDDDKDTAYIYSQLGWCKRHLEKYDEA 339
Query: 226 LQHIEHAQIVRFSGKELPLKL---------KVKAGICYLRLGNMEKAEI-LFADLQW--- 272
++ A+ + + ++L + KA YL+ +K +I L +D+ W
Sbjct: 340 IKAFSQAKKWGRNDAWINIELGHCYKAKDERQKALDFYLKAEKFDKNDIYLLSDIAWHYD 399
Query: 273 ------------KNAI----DHADLITEVADTLMSLGHSNSALKYYHFLET--NAGTDNG 314
K A+ D A + E L LG A+K Y + G D
Sbjct: 400 AMDKNQEALKYIKRAVKLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALNLDEEGKDER 459
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNI 348
Y+ +L CY L E AI + KA + D+I
Sbjct: 460 YINSQLGWCYRQLGEYKKAIKYHKKAKELGRDDI 493
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 38/324 (11%)
Query: 45 YAYGNFEQAISLLKEVVRLSPN-------LPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
Y +F+ A L + +L P L ETY +L GNH+ A ++ + A
Sbjct: 80 YFLDDFKNAEKYLLKANKLYPEDNFTCTLLIETYISLSRVEDENGNHEKAMEYALEAKKY 139
Query: 98 SPKD--SALWKQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
D A L + + G +A ++ I D L L VE G E+
Sbjct: 140 VRDDEGEANADSFLAWLYDRYGHYTEAEELLKNMINKSKNDEWLYSELGYCLVEQGRQEE 199
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE----YLK-VHPSDADLSVI 209
A ESY + ++ + A +F + G +++ EE YLK + + D+ ++
Sbjct: 200 ALESYFKA-------IELNRNDAWIFTRIGMCYKNMDKKEEAIEYYLKALELKEDDIFIM 252
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
L + +EK L+++E + + E + G C +L ++A +
Sbjct: 253 SDLAWLYDSLGEFEKALKYLERLEEL----GENDAWTNTEYGYCLSKLKRFDEAIVKI-- 306
Query: 270 LQWKNAIDHADLITEVADTLMSLGHSNSALKYYH-----FLETNA-GTDNGYLYLKLAEC 323
A++ D + A LG L+ Y F + G ++ ++ ++L C
Sbjct: 307 ---NRALEAEDDDKDTAYIYSQLGWCKRHLEKYDEAIKAFSQAKKWGRNDAWINIELGHC 363
Query: 324 YLSLKERAHAIMFFYKALDRFEDN 347
Y + ER A+ F+ KA ++F+ N
Sbjct: 364 YKAKDERQKALDFYLKA-EKFDKN 386
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 132/368 (35%), Gaps = 70/368 (19%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI + + N LG + A + A DFY+ A D L +
Sbjct: 336 YDEAIKAFSQAKKWGRNDAWINIELGHCYKAKDERQKALDFYLKAEKFDKNDIYLLSDIA 395
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+A+ YI++A++ D + + +G Y++A + YE L +
Sbjct: 396 WHYDAMDKNQEALKYIKRAVKLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALNLDEEG 455
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
D +QL G R +G ++ +K H +L D+ +
Sbjct: 456 KDERYINSQL----GWCYRQLGEYKKAIKYHKKAKELGRDDIWI---------------- 495
Query: 230 EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA--EILFADLQWKNAIDHADLITEVAD 287
V+ G+CY +L EKA L A +D D++
Sbjct: 496 -----------------NVEIGMCYAKLEEYEKAIENYLVA-----YEMDRDDIL----- 528
Query: 288 TLMSLGHSNSALKYY----HFL--ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
TL LG A++ Y FL G D+ +L ++ + I K+L
Sbjct: 529 TLTELGWVYDAMEKYDDAIEFLLKAEKLGRDDEWLNTEIGLNLGRSGKTQEGIERLQKSL 588
Query: 342 DRFEDN-------IDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNE 394
ED+ I++ + LEE EEA+ L+ K+L D WLN
Sbjct: 589 TMVEDDDTEQKIFINSEIGWLYGRLEEPNPEEALKYLNVAKELGRDDE--------WLNS 640
Query: 395 KIIMKLCH 402
++ +L +
Sbjct: 641 ELGFELGY 648
>gi|336259000|ref|XP_003344306.1| hypothetical protein SMAC_06507 [Sordaria macrospora k-hell]
gi|380091822|emb|CCC10550.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1152
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 12 KTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETY 71
KT + +K G RK + +G A + +++AI++ KE++R P P+ +
Sbjct: 148 KTSRPRRKLGPRKPPPPPPE--IQFRIGIARKAFDRREYQEAINMAKEIIRQRPATPQAW 205
Query: 72 NTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL---LTFAVQKGDTA--------- 119
N L L H LGN ++A + A L PKD+ W + + V D A
Sbjct: 206 NLLSLIHEELGNREAATMCLISGAWLIPKDARHWMNVALYCLYGVDMMDDADPARKLALE 265
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
+A+ QA++A+ +++ R A +++G A Y + K+ P N+ + A+
Sbjct: 266 RAVMCYSQALQADKQNVEARTGKADALMQLGQSHLALAQYLRALKVQPLNIRTVRNLAEA 325
Query: 180 FL 181
L
Sbjct: 326 AL 327
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 239 GKELPLKLKVKAGICYLRLGNMEKAE--ILFADLQWKNAIDH----ADLITEVADTLMSL 292
G+ LP+ L+ + + +++G++ +AE + D + A+D D + ++ + L+
Sbjct: 440 GRALPVDLRARLYVFRMKMGDLYEAERHLTSLDPTAETAVDDFYDFPDCLKDIGNALLDN 499
Query: 293 GHSNSALKYYHFLE---TNAG--TDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDN 347
AL+Y+ E AG + + + + C+++L ++ A F A++ +DN
Sbjct: 500 EFPAKALEYFELYEKIADQAGDISMDADILVSFGRCHMALGNKSAAEERFIAAIEDDDDN 559
Query: 348 IDARLTLASL---LLEEAKEEEAITLLSPPKDLDS 379
I+AR+ LA++ + + EEA L+ +L++
Sbjct: 560 IEARVCLANMYEHVADPEGREEAFLLVRDAMNLEA 594
>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 784
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 13/258 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-K 106
G +++AI+ + +RL P Y GLA G + A Y A L PK + ++
Sbjct: 40 GEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYIN 99
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ L F +KG+ +A+ QA+R + +D + + + G+Y++A Y+Q +
Sbjct: 100 RGLAF-YRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFN 158
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
P A + F G+ R+I + L+++P DA L + Y++ +
Sbjct: 159 PKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTHRGLA--FQSKSEYDRAI 216
Query: 227 QHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLI--TE 284
++ Q +RF K + + G + G +A AD +D +I T
Sbjct: 217 --ADYDQALRFDPKY--ANIYINRGYAFRSKGEYNRA---IADFDQALRLDPKSVIAYTG 269
Query: 285 VADTLMSLGHSNSALKYY 302
D S G ++ A+ Y
Sbjct: 270 RGDAFRSKGENDRAIADY 287
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +R +P Y G A + G + A Y A L+P+D+A +
Sbjct: 142 GEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTH 201
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
K + +A+ QA+R +PK ++ I+ + G+Y +A ++Q +L P
Sbjct: 202 RGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 261
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+V A F G+ R+I ++ L+ +P
Sbjct: 262 KSVIAYTGRGDAFRSKGENDRAIADYDQALRFNP 295
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 15/256 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +AI+ + +RL P Y G A + G + A Y A +PK + ++
Sbjct: 244 GEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRN 303
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ A+R +PK + + + G+Y++A Y+Q +L P
Sbjct: 304 RGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDP 363
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ A F + G+ R+I +E L++ P A + + A L + Y++ +
Sbjct: 364 KDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSA--AAYNGRGAALNKKGEYDRAIA 421
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI----DHADLIT 283
++ A L LK C+ K ++ A + A+ +AD
Sbjct: 422 DLDQA---------LRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLNPKYADAYQ 472
Query: 284 EVADTLMSLGHSNSAL 299
E T + G S+ AL
Sbjct: 473 ERGVTFQARGESDRAL 488
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +RL P Y G A G H A Y A L PK +A +
Sbjct: 346 GEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSAAAYNG 405
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+KG+ +A+ + QA+R +P + H + + GD ++A + +L P
Sbjct: 406 RGAALNKKGEYDRAIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLNP 465
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
DA + F G++ R++ L E +++ P
Sbjct: 466 KYADAYQERGVTFQARGESDRALADLAEAVRLKP 499
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 1/175 (0%)
Query: 29 KLSP-GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P V G + G ++AI+ + +R +P Y G A G + A
Sbjct: 258 RLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRA 317
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y A L PK + + KG+ +A+ QA+R +PKD + + + +
Sbjct: 318 IADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFY 377
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
G++++A Y++ +L P + A K G+ R+I L++ L++ P
Sbjct: 378 RKGEHDRAIADYDEALRLDPKSAAAYNGRGAALNKKGEYDRAIADLDQALRLKPG 432
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ +RL+P Y GLA + + A Y A PK + ++
Sbjct: 176 GEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYIN 235
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA+R +PK + + G+ ++A Y+Q + P
Sbjct: 236 RGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNP 295
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A + F G+ R+I + L++ P A
Sbjct: 296 KYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSA 332
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +++AI+ + +RL P Y GLA G + A Y A L +D+ +
Sbjct: 71 YRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVV 130
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ KG+ +A+ QA+R PK + + G+Y++A Y+ +
Sbjct: 131 YTNRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALR 190
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
L P++ A F + R+I ++ L+ P A++ +
Sbjct: 191 LNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYI 234
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 65/157 (41%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +++AI+ + +RL Y G A + G + A Y A +PK +
Sbjct: 105 YRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYAYA 164
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
++ KG+ +A+ A+R P+D + H + +Y++A Y+Q +
Sbjct: 165 YRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALR 224
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
P + F G+ R+I ++ L++ P
Sbjct: 225 FDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 261
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y G A + G + A Y A L PK + + +KG+ +A+ QA+R
Sbjct: 29 YYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALR 88
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL-FPDNVDATKTGAQLFLKCGQTARS 189
+PK ++ I+ + G+Y++A Y+Q +L D V T G F G+ R+
Sbjct: 89 LDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRG-DAFRSKGEYDRA 147
Query: 190 IGILEEYLKVHP 201
I ++ L+ +P
Sbjct: 148 IADYDQALRFNP 159
>gi|407462626|ref|YP_006773943.1| hypothetical protein NKOR_05575 [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046248|gb|AFS81001.1| hypothetical protein NKOR_05575 [Candidatus Nitrosopumilus
koreensis AR1]
Length = 469
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAA 95
M EA+ ++ GN+ QAI++ E++ ++PN T G+AHS +G+HK + + F++I
Sbjct: 27 MFNEATEFFSNGNYNQAIAIYDEILEIAPNNISTLKMKGIAHSNMGDHKKSLEQFFIILQ 86
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR 139
H AL + F G+ +++ Y +A++ +P I ++
Sbjct: 87 HRPNDVIALTGMGVGFG-NLGEYQESISYFEKALKEKPNSIVIK 129
>gi|170698735|ref|ZP_02889800.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
gi|170136360|gb|EDT04623.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
Length = 833
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 40 EASLQYAYGN----------FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+ASL A+ N + QA+ ++ +R++P L + +N G AH LG+ +A
Sbjct: 270 DASLAVAHANLSGVRRRQARYAQALVHAQDAIRIAPELADAHNQAGNAHHGLGDLVAAQA 329
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
Y A L+P DS L +++ A+A+ Y RQA+ +S+ ++L
Sbjct: 330 CYRTALELNPADSGACHNLSVVLLKRERHAEALAYCRQALAGGRPTVSMYVNLGDILRAQ 389
Query: 150 GDYEKAAESYEQIQKLFPDNV--DATKTGAQLFLKCGQTA 187
G+ + A +Y L D+ DA + +L +A
Sbjct: 390 GNVDAAVPAYRDALALVRDDASDDAAEVLGRLLFAAAASA 429
>gi|403253369|ref|ZP_10919670.1| hypothetical protein EMP_06327 [Thermotoga sp. EMP]
gi|402810903|gb|EJX25391.1| hypothetical protein EMP_06327 [Thermotoga sp. EMP]
Length = 357
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
SL G E+ I L + V + P L + Y +LG A+ LG+++ A ++ +P
Sbjct: 138 GSLLVEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPN 197
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D + + + A+ + + + +P +I L+ Y E+G+ EKA E E
Sbjct: 198 DKITYFMITEAYYEMNRKDLAVKTLERLLEIDPDNIPALYQLSQLYRELGNEEKAREMEE 257
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+I P + A++ LK G+ + LE+ ++ P
Sbjct: 258 KIMNCKPKYPTELEPWARVMLKRGRYKEVVEELEKIVESSP 298
>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1342
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
++Q+I+ + ++L P + YN+ G+A+ L +K A + Y A L PK++ +
Sbjct: 724 YKQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRG 783
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
Q D Q + QAI+ +PKD + Y E+ DY++A Y Q +L P +
Sbjct: 784 IAYSQLKDYKQVIADYTQAIQLDPKDATYYGMRGGAYSELKDYKQAIADYTQAIQLDPKD 843
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ K ++I L E ++ P +A
Sbjct: 844 AIYYSLRGLAYSKLKDYKQAISDLTETIRRDPKNA 878
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 29 KLSPG-VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K+ P + + G A LQ ++ AI + ++L P Y T G A+ L ++K A
Sbjct: 1069 KIDPKKIINLRGAAYLQLK--EYKLAIDDYNQAIQLDPKNAIYYGTRGDAYLQLKDYKQA 1126
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFA-VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
+ Y A L PK+ A++ FA +Q D A+ QAI+ +PK+ + Y
Sbjct: 1127 INDYTHAIQLDPKN-AIYYGTRGFAYLQLKDYKLAINDYTQAIKIDPKNATYYSARGDAY 1185
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDA--TKTGAQLFLK 182
++ D+++A + Y Q KL PD +A + A FLK
Sbjct: 1186 FQLKDHKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLK 1223
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 117/291 (40%), Gaps = 32/291 (10%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+++QAI E +++ P + N G A+ L +K A D Y A L PK++ +
Sbjct: 1056 DYKQAIDNYTEAIKIDPK--KIINLRGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGTR 1113
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+Q D QA+ AI+ +PK+ Y+++ DY+ A Y Q K+ P
Sbjct: 1114 GDAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLKDYKLAINDYTQAIKIDPK 1173
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
N + + ++I + +K+ P + + + +++ Y++ +
Sbjct: 1174 NATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKD--YKQAIDD 1231
Query: 229 IEHAQIVRFSGKELPLKLKVKAGICYLRLG--NMEKAEILFADLQWKNAIDHADLITEVA 286
A +KLK Y LG + E E+ A W+NAI + + A
Sbjct: 1232 WNQA-----------IKLKPDYPEAYTNLGIVSYEMGEVETAINYWRNAI---KINSNFA 1277
Query: 287 DTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFF 337
+ ++LG + Y + AG LK AE L L +R I F
Sbjct: 1278 EAHLALG-----VALYGKGDQEAG-------LKSAETALKLDKRYGKIEFL 1316
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD-----SAL 104
+ QAI+ + +++ P Y+ G+AH L ++K A D Y A + PK A
Sbjct: 1023 YRQAINDYTQAIKIDPKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDPKKIINLRGAA 1082
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ QL + + D QAI+ +PK+ Y+++ DY++A Y +
Sbjct: 1083 YLQLKEYKLAIDD-------YNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDYTHAIQ 1135
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
L P N T +L+ +I + +K+ P +A
Sbjct: 1136 LDPKNAIYYGTRGFAYLQLKDYKLAINDYTQAIKIDPKNA 1175
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 31/185 (16%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+++QAI+ + ++L P Y+ GLA+S L ++K A PK++ Q
Sbjct: 825 DYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDPKNAPYTMQG 884
Query: 109 LTFAVQK-------GDTA--QAMYYIRQAIRAEPKDISLRIH------------------ 141
L ++ K G T +Y R I E K+ L I
Sbjct: 885 LRYSEFKDIKGFLSGYTGFMSTVYRTRGGIYYELKEYKLAIDDYTQAIKIDSQNANSYAI 944
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLF--LKCGQTARSIGILEEYLKV 199
A Y ++ +Y++A + Y Q+ ++ P N AT GA+ F K + ++I + +K
Sbjct: 945 RAGIYYKLKEYKQAIDDYNQVIQIDPQN--ATYYGARGFAYFKLKEYKQAINDWSQVIKF 1002
Query: 200 HPSDA 204
P DA
Sbjct: 1003 DPKDA 1007
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 64/155 (41%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F +AI + ++++P YN ++ L N++ A A L PKD+ +
Sbjct: 656 FPEAIEAYNQSIKINPLFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRG 715
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
Q + Q++ QAI+ +PK+ Y + +Y++A Y Q +L P N
Sbjct: 716 LLYGQLEEYKQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKN 775
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ + + + I + +++ P DA
Sbjct: 776 AKYYNSRGIAYSQLKDYKQVIADYTQAIQLDPKDA 810
>gi|444917855|ref|ZP_21237942.1| hypothetical protein D187_00628 [Cystobacter fuscus DSM 2262]
gi|444710648|gb|ELW51625.1| hypothetical protein D187_00628 [Cystobacter fuscus DSM 2262]
Length = 379
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+ + +Y GNFEQA++ + LSP+ P +G + ++G A + +A P
Sbjct: 37 KGTTEYLQGNFEQALASFASMKELSPDDPRLPAAIGEVYLSMGKLNEALAQFQLALQRDP 96
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
K S W ++ Q G T +A +R+A+ P+D + L + G+ + A + +
Sbjct: 97 KRSTNWSRVGFIHAQLGHTEEAQSALRKALAIYPRDFNALEQLGELDFKRGEKDSAVKHF 156
Query: 160 EQIQKLFPDNVDATKT--GAQLFLKCGQTARSIGILEEY 196
PD A A++F+ G+ A ++ +L E+
Sbjct: 157 LLAADASPDASKAPLVLRAAEVFIAEGRHAEALLMLGEW 195
>gi|414078463|ref|YP_006997781.1| hypothetical protein ANA_C13292 [Anabaena sp. 90]
gi|413971879|gb|AFW95968.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1150
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
++Y G+ AI ++ +PN + Y G+ LG+ A D Y A +P D+
Sbjct: 806 VRYELGDKPGAIDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDA 865
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
+ + GD A+ QAI+ P D + S ++GD + A + Y Q
Sbjct: 866 QAYYNRGIVRYELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQA 925
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
K P++ +A + G +I + +K +P+DA+
Sbjct: 926 IKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDAN 968
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI + ++ +PN + Y G+ LG+ A D Y A +P D+ +
Sbjct: 845 GDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDDYTQAIKFNPNDANAYYG 904
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P D + S ++GD + A + Y Q K P
Sbjct: 905 RGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNP 964
Query: 168 DNVDA 172
++ +A
Sbjct: 965 NDANA 969
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
+LSP + ++Y G+ AI + ++++PN + YN G+ + LG+ A
Sbjct: 690 ELSPRAAFYYNQGIVRYELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELGDKPGAI 749
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
D Y A ++P + + + GD A+ AI+ P + + E
Sbjct: 750 DDYNQAIRINPNYALAYYNRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYE 809
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+GD A + Y K P+ A + G +I + +K +P+DA
Sbjct: 810 LGDKPGAIDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDA 865
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G S++ G+ + AI + ++ +PN Y G + LG+ + A D Y +A +
Sbjct: 938 GRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYN 997
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY------VEIGDY 152
P +A + + + + GD A+ AI+ P + A++Y E+GD
Sbjct: 998 PNYAAYYNRGIVRN-ELGDKQGAIDDYTLAIKYNP-------NYAAYYNRGIVRNELGDK 1049
Query: 153 EKAAESYEQIQKLFPDNVDA 172
+ A + Y K+ P+ DA
Sbjct: 1050 QGAIDDYTLAIKINPNYADA 1069
>gi|186681150|ref|YP_001864346.1| hypothetical protein Npun_R0649 [Nostoc punctiforme PCC 73102]
gi|186463602|gb|ACC79403.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 411
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+++A ++ + ++ Y L S+ G Y L+P D+A++ +L
Sbjct: 42 NYQEAANIWRSLIERDSKNSYAYIKLADILSSQGKIAETIAAYRQGLQLTP-DAAIYLKL 100
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
F V+KG TA+A+ RQA++ + K + I LA + +G+ E+A +Y Q K+ PD
Sbjct: 101 GNFLVEKGRTAEAIAAFRQAVKLDAKSDTASIILAMNLIAMGNPEEAVVAYRQAIKIEPD 160
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ + LF K G+ +I E L ++P
Sbjct: 161 DDNYNNLADTLF-KIGKREEAIAAYREALIINP 192
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ +E + ++P + Y++LG + + A Y A+ PK+ +++
Sbjct: 175 GKREEAIAAYREALIINPKSYQAYSSLG----DILEYSEAVAIYRQASKNDPKNEVYYER 230
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++++G +A+ RQ I+ EP+ AS YVE+GD E +++ L+
Sbjct: 231 LAELSLKRGFVNEAIAAYRQLIKIEPE--------ASRYVELGDVLMTQEKHQEAIALYR 282
Query: 168 DNVDATKT 175
V A T
Sbjct: 283 QAVAAKPT 290
>gi|322419884|ref|YP_004199107.1| hypothetical protein GM18_2373 [Geobacter sp. M18]
gi|320126271|gb|ADW13831.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 263
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
Q G + QAI K V L PN E Y LG A+S G A L+P+D
Sbjct: 15 QMESGEYSQAIEAFKGCVALEPNNAEGYFYLGEAYSEAGQVDDAIAALKKGLELAPQDVD 74
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L + G A+ R+ +PKD + + Y + + A +++E
Sbjct: 75 GLTALGDVYFESGKHKDALACYRKMTELQPKDCDGYVSMGLVYNAMERTDDALKAFEMAL 134
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+L P NV A L+ G ++I + +++ P+DA
Sbjct: 135 ELDPANVFALNAMGDLYYGLGDNEKAIAAYHKGIEIDPTDA 175
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Query: 29 KLSP-GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L+P V + + + G + A++ +++ L P + Y ++GL ++A+ A
Sbjct: 67 ELAPQDVDGLTALGDVYFESGKHKDALACYRKMTELQPKDCDGYVSMGLVYNAMERTDDA 126
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ +A L P + + GD +A+ + I +P D + R +L Y
Sbjct: 127 LKAFEMALELDPANVFALNAMGDLYYGLGDNEKAIAAYHKGIEIDPTDATARFNLGELYY 186
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
++ D E A + +L PD + T + + +TA +I E YLK
Sbjct: 187 DMDDLEAAERETLEAIRLDPDFTMSYLTLGNICIDQDRTAEAIKHFENYLK 237
>gi|402901515|ref|XP_003913694.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Papio anubis]
Length = 805
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 548 NPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYRYFPCNIEVIEWL 607
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 608 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 667
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 668 NVECLRFLVRLCTDLG 683
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 476 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 535
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L +GD +QA Y ++ R
Sbjct: 536 LYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYR 595
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 596 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 655
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 656 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 704
>gi|197117495|ref|YP_002137922.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197086855|gb|ACH38126.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 605
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
++ ISL ++ V+ SP + L L + G + A A + P D L L
Sbjct: 436 WQSEISLWRDAVKKSPAKLRPHQNLALYYGKAGRLEEARQELQQAIAIKPDDFELHNNLG 495
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
Q+G+ A+ +A++ EP D R +L + Y+ G Y++A E Y+ KL PD
Sbjct: 496 IVYRQQGNLDAAILEYERALQLEPADAMARYNLGNAYLGRGRYQEALEQYQSCLKLIPDY 555
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D ++ K GQ+ +I +E L+++P++A
Sbjct: 556 DDLHNNMGIVYNKAGQSDAAIKEFQEALRLNPANA 590
>gi|351706998|gb|EHB09917.1| Intraflagellar transport protein 88-like protein [Heterocephalus
glaber]
Length = 893
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 631 QAIEWLMQLISVVPTDSKALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 690
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NVD
Sbjct: 691 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVD 750
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 751 CLRFLVRLCTDIG 763
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 85/229 (37%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A ++E+A KE +R + E +GL + L A + ++ + + +
Sbjct: 556 FANADYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALECFLKLHAILRNSAQV 615
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D QA+ ++ Q I P D L Y GD +A + Y + +
Sbjct: 616 LYQIANIHELMEDPNQAIEWLMQLISVVPTDSKALSKLGELYDSEGDKSQAFQYYYESYR 675
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 676 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 699
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A ++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 700 AIQYFERASLI----QPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRK 744
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 3/162 (1%)
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
H + + A ++ + + P DS +L +GD +QA Y ++ R P +I
Sbjct: 623 HELMEDPNQAIEWLMQLISVVPTDSKALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIE 682
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+ L ++Y++ EKA + +E+ + P V A F + G +++ ++
Sbjct: 683 VIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIH 742
Query: 198 KVHPSDADL--SVIDLLVAI-LMENNAYEKTLQHIEHAQIVR 236
+ P + D ++ L I L E Y L+ +E + +R
Sbjct: 743 RKFPENVDCLRFLVRLCTDIGLKEVQEYATKLKRLEKMKEIR 784
>gi|387133916|ref|YP_005703906.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio vulgaris
RCH1]
gi|311235415|gb|ADP88268.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio vulgaris
RCH1]
Length = 886
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 5/191 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS Q A G+ A + + L P L A G A + A +P
Sbjct: 372 ASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRLKQADGRPDEALEDLKAAVVAAPD 431
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D A+ L + + +GDT + + + + +R P+D L L YV +GD K ++
Sbjct: 432 DLAVRNALFAYHLGRGDTGKGVQVVLEGLRGTPQDAILYTMLVPVYVNMGDEAKGLDAVA 491
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD-----ADLSVIDLLVAI 215
Q + PD DA G +L G+ +++ E YL P A +++DLL
Sbjct: 492 QAHRADPDFPDAYLAGLRLHAGAGRAEQALAESEAYLARKPDAPGFLLASGALLDLLGRT 551
Query: 216 LMENNAYEKTL 226
+ ++K L
Sbjct: 552 AEADARFDKAL 562
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 115/314 (36%), Gaps = 42/314 (13%)
Query: 21 GRRKGSKNKLSPG-------VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNT 73
G R G++ G V +L + L+ A G ++A+ LK V +P+ N
Sbjct: 379 GDRAGAERSFEAGLALQPAHVPALLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNA 438
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
L H G+ + +P+D+ L+ L+ V GD A+ + + QA RA+P
Sbjct: 439 LFAYHLGRGDTGKGVQVVLEGLRGTPQDAILYTMLVPVYVNMGDEAKGLDAVAQAHRADP 498
Query: 134 KD-----ISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
LR+H + G E+A E PD L G+TA
Sbjct: 499 DFPDAYLAGLRLHAGA-----GRAEQALAESEAYLARKPDAPGFLLASGALLDLLGRTAE 553
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNA---YEKTLQHIEHAQIVRFSGKELPLK 245
+ ++ L + +V + VA + A E+ L+ +H Q
Sbjct: 554 ADARFDKALAANDPRVSFAVAERAVASGQDEKARRVLEEALR--QHDQTT---------- 601
Query: 246 LKVKAGICYLRLGNMEKAEILFADLQWKNA----------IDHADLITEVADTLMSLGHS 295
L+ I R+G + A L+ ++ + + H D E ADT LG
Sbjct: 602 LRDALAIQLARMGKPDDALALYTAIETQRPREALLGRYRLLTHLDRHQEAADTARELGRR 661
Query: 296 NSALKYYHFLETNA 309
SA LE A
Sbjct: 662 ESASPLPVLLEAAA 675
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++ A SL + V + P+L E Y LG+A G+ ++A + +P+ A +
Sbjct: 279 DYTLAASLFQRSVAMRPSL-EGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMT 337
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+T + + A+A ++ + P D + LAS + GD A S+E L P
Sbjct: 338 VTILLAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPA 397
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
+V A ++L G+ ++ L+ + P DL+V + L A + K +Q
Sbjct: 398 HVPALLQLSRLKQADGRPDEALEDLKAAVVAAPD--DLAVRNALFAYHLGRGDTGKGVQV 455
Query: 229 I 229
+
Sbjct: 456 V 456
>gi|345481232|ref|XP_003424321.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Nasonia vitripennis]
Length = 758
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+ EQA +++ + P+ P LG ++G+ + A+ +Y + P + + L
Sbjct: 499 DVEQAADWYNQLLGIIPSDPGVLQKLGEMFDSMGDKQQAYQYYSDSYRFYPANFDVIDWL 558
Query: 109 LT-FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ FA Q G +A+ Y ++A+ P++ R+ +AS + G + KA Y+ I + FP
Sbjct: 559 GSYFAQQSGLPEKALTYFQEAVVLAPEEPKWRLCVASCLRKTGQFHKALAEYQDINRRFP 618
Query: 168 DNVDATK 174
DN++ K
Sbjct: 619 DNIECLK 625
>gi|345481230|ref|XP_001604146.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Nasonia vitripennis]
Length = 786
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+ EQA +++ + P+ P LG ++G+ + A+ +Y + P + + L
Sbjct: 552 DVEQAADWYNQLLGIIPSDPGVLQKLGEMFDSMGDKQQAYQYYSDSYRFYPANFDVIDWL 611
Query: 109 LT-FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ FA Q G +A+ Y ++A+ P++ R+ +AS + G + KA Y+ I + FP
Sbjct: 612 GSYFAQQSGLPEKALTYFQEAVVLAPEEPKWRLCVASCLRKTGQFHKALAEYQDINRRFP 671
Query: 168 DNVDATK 174
DN++ K
Sbjct: 672 DNIECLK 678
>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 222
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G ++AIS + + L+P+ + + G+ S G + A + A L+P D+A
Sbjct: 47 YELGRIDEAISYIDRALELNPDYADAWYNRGIVLSDAGKYDEAIACFEKAIALNPDDAAA 106
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W + + G+ +A+ R+ + + + + ++ Y E G + KA ES+++ +
Sbjct: 107 WNNMGLAYYESGNMGKAIECYRKCVSIDEEHAAAWYNMGLAYYESGRFNKAEESFKKALE 166
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
L ++VD ++ K Q ++ L++ P ++ + L++ LME
Sbjct: 167 L-DESVDTLNNLGIVYGKLRQYEMAMECFNRILEIDPENSAATYNLLILKRLME 219
>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 496
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K++P K +L+ G+ + AI+ L + ++++PN E Y G A + LG+ ++A
Sbjct: 227 KINPNFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTA 286
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ A +P D + + GD A+ QAI P + +
Sbjct: 287 ITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRA 346
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++GD + A Y Q + P+ DA K G +I + + ++P+ AD
Sbjct: 347 KLGDMQGAITDYNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFAD 404
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K++P T+ G + + G+ + AI+ + ++ +PN P YN A + LG+ + A
Sbjct: 261 KINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGA 320
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ A +++P + +K + GD A+ QAI P + +
Sbjct: 321 ITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNARY 380
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++GD + A Y Q + P+ DA K G +I + + ++P+ AD
Sbjct: 381 KLGDMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNFAD 438
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+L+ G+ + AI+ L + ++++PN + Y G LG+ + A A ++P
Sbjct: 206 GTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINPN 265
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + GD A+ QAI+ P D + A+ ++GD + A +
Sbjct: 266 YTEAYGNRGNARAELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFN 325
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Q + P+ +A K + K G +I + + ++P+ AD
Sbjct: 326 QAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYAD 370
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI+ + ++++PN Y G A + LG+ + A + A +++P + +
Sbjct: 145 GDMPGAITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININPNYAEAYTN 204
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T + GD A+ + QAI+ P + + ++GD + A Q K+ P
Sbjct: 205 RGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINP 264
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ +A + G +I + +K +P+D
Sbjct: 265 NYTEAYGNRGNARAELGDMQTAITDFNQAIKTNPND 300
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI+ + + ++PN + Y G A + LG+ A Y A ++P + +
Sbjct: 111 GDMPGAITDYDQAININPNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYN 170
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI P + + E+GD + A Q K+ P
Sbjct: 171 RGNARAKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINP 230
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ A L K G +I L + +K++P+
Sbjct: 231 NFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINPN 265
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 64/155 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ + + ++PN E Y G + LG+ + A A ++P + +
Sbjct: 179 GDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYN 238
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T + GD A+ + QAI+ P + + E+GD + A + Q K P
Sbjct: 239 RGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKTNP 298
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
++ A K G +I + + ++P+
Sbjct: 299 NDPLPYNNRANARAKLGDMQGAITDFNQAININPN 333
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 66/155 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN + I+ + ++ +PN + Y G A + LG+ A Y A +++P + +
Sbjct: 77 GNKQAQITDYDQAIKTNPNDAQAYYNRGNARAELGDMPGAITDYDQAININPNFADAYYN 136
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P + + ++GD + A + Q + P
Sbjct: 137 RGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININP 196
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ +A L + G +I L + +K++P+
Sbjct: 197 NYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPN 231
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 52/125 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ + + ++PN Y G + LG+ + A Y A +++P + +
Sbjct: 315 GDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYADAYFN 374
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI P + + ++GD + A Y Q + P
Sbjct: 375 RGNARYKLGDMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAITDYNQAININP 434
Query: 168 DNVDA 172
+ DA
Sbjct: 435 NFADA 439
>gi|196006385|ref|XP_002113059.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens]
gi|190585100|gb|EDV25169.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens]
Length = 996
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 2/203 (0%)
Query: 4 INYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVR 62
IN G K+ R ++ + N LSP +LG A + Y G + A+ K +
Sbjct: 208 INLGNVLKEARIFDRASTAYLRALN-LSPNNPTVLGNLACVYYEQGLMDLAVDTYKRAIE 266
Query: 63 LSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAM 122
L PN P+ Y L A LG A + Y A L P + L +KG +A
Sbjct: 267 LQPNFPDAYCNLANALKELGKVTEAEECYNTALSLCPTHADSLNNLANIKREKGQIGEAS 326
Query: 123 YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK 182
R+A+ P+ + +LAS + G ++A Y++ ++ P DA +
Sbjct: 327 KLYRKALEIFPEFAAAHSNLASVLQQQGKLQEALAHYKEAIRINPSFADAYSNMGNTLKE 386
Query: 183 CGQTARSIGILEEYLKVHPSDAD 205
+I ++++P+ AD
Sbjct: 387 MQDVQGAIQCYTRAIQINPNFAD 409
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS A + E A+ ++ +PNL N LG ALG + A Y+ A P
Sbjct: 109 ASALVAAQDLEGAVKAYATALQYNPNLYCVRNDLGNLLKALGRLEEAKACYLKAIETQPN 168
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L +G+ A+++ +A+ + + I+L + E +++A+ +Y
Sbjct: 169 FAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDNGFLDAYINLGNVLKEARIFDRASTAYL 228
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ L P+N A ++ + G ++ + +++ P+ D
Sbjct: 229 RALNLSPNNPTVLGNLACVYYEQGLMDLAVDTYKRAIELQPNFPD 273
>gi|38569925|gb|AAR24495.1| TPR-repeat protein [uncultured crenarchaeote DeepAnt-EC39]
Length = 275
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA------ 103
++ AI+ +V+++SP N G+A + LGN AF++Y A ++PK +A
Sbjct: 63 YQDAITCFDKVIKISPEYFAAINNRGIALAELGNTDGAFEYYNKAIKINPKYAAAHYNKG 122
Query: 104 -LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
L+ +LL +A+ + +AI+ + +++ + ++ +E+A +E I
Sbjct: 123 VLYDKLLQ-------HEEAIQSLDEAIKCDSGNVNTAFYRGVVLGKMKKHEEALNCFENI 175
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ P ++DA + G+ R++ I ++ L+VH + ++
Sbjct: 176 YRKHPKHMDAFFHKGMELAELGKHERALEIFDKLLRVHEGNVNV 219
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Query: 48 GNFEQAISLLKEVVRLSP-NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
G + AIS K++++ P N+ YN GLA + L ++ A + +SP+ A
Sbjct: 27 GQAKNAISFFKKIIKQEPKNIDALYNQ-GLALNQLKKYQDAITCFDKVIKISPEYFAAIN 85
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ G+T A Y +AI+ PK + + Y ++ +E+A +S ++ K
Sbjct: 86 NRGIALAELGNTDGAFEYYNKAIKINPKYAAAHYNKGVLYDKLLQHEEAIQSLDEAIKCD 145
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
NV+ + K + ++ E + HP D
Sbjct: 146 SGNVNTAFYRGVVLGKMKKHEEALNCFENIYRKHPKHMD 184
>gi|15229253|ref|NP_187074.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
gi|75336082|sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC; AltName:
Full=Protein SECRET AGENT
gi|6721161|gb|AAF26789.1|AC016829_13 putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|18139887|gb|AAL60196.1|AF441079_1 O-linked N-acetyl glucosamine transferase [Arabidopsis thaliana]
gi|20259324|gb|AAM13988.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|21436429|gb|AAM51415.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|110742062|dbj|BAE98963.1| O-linked GlcNAc transferase like protein [Arabidopsis thaliana]
gi|332640535|gb|AEE74056.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
Length = 977
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y ++ I+ +E +R+ P E Y + A G+ A +Y+IA L P
Sbjct: 94 GAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPN 153
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L + ++KG ++A +QA+ P + +L + G +A Y
Sbjct: 154 FADAWSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYL 213
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P A A LF++ G R++ +E +K+ P+ D
Sbjct: 214 EAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPD 258
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L G+ +A+ KE V+L P P+ Y LG + ALG A Y A + P
Sbjct: 230 AGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPN 289
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + + ++G A+ + +QA+ +P+ + +L + +IG ++A Y
Sbjct: 290 SAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYN 349
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
Q L P++ A ++++ + + + L V
Sbjct: 350 QCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAV 388
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + L+P L + ++ LG A G A+ Y+ A + P + W
Sbjct: 169 GRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSN 228
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P ++L + Y +G +A Y+ ++ P
Sbjct: 229 LAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRP 288
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++ A A ++ + GQ +I ++ L P
Sbjct: 289 NSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDP 322
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 13/219 (5%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G+F+QA+ V + +P + +G + L + A + P+ +
Sbjct: 64 YKGGDFKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAEC 123
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + +KGDT +A+ Y AI P +LAS Y+ G +A + +Q
Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALS 183
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P VDA L G + E +++ P+ A L + ME+ +
Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFA--IAWSNLAGLFMESGDLNR 241
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
LQ+ + A +KLK YL LGN+ KA
Sbjct: 242 ALQYYKEA-----------VKLKPAFPDAYLNLGNVYKA 269
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP-KDSALWKQLLTF 111
A SL K + ++ L +N L + + GN+ A Y + P AL + T+
Sbjct: 378 ASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNEVLRIDPLAADALVNRGNTY 437
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ G +A+ AI P +LAS Y + G E A SY+Q L PD +
Sbjct: 438 K-EIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAITSYKQALLLRPDFPE 496
Query: 172 AT 173
AT
Sbjct: 497 AT 498
>gi|383761610|ref|YP_005440592.1| hypothetical protein CLDAP_06550 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381878|dbj|BAL98694.1| hypothetical protein CLDAP_06550 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 381
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
L EA G++ AI+ ++V L P+ PE Y GN K+A +
Sbjct: 56 AASFLAEAQTALLRGDYSGAIAAYEKVAALDPHNPEPYIVKSRLFLIEGNAKAAQEMAAK 115
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A ++P D L G+ AM Y A +P + ++ Y ++G+ +
Sbjct: 116 AVEVAPSDPEALAALARAEDWLGNYETAMRYALDAYELQPDNAETLAIISEIYTDVGNLQ 175
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+A + +L P+NV A + A L + G+ +I LE+ L + P ADL
Sbjct: 176 QAEAYINRALELDPENVLALRNKAYLLDRQGRGREAIKALEQALTLAPQRADL 228
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 9/185 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN + A + + V ++P+ PE L A LGN+++A + + A L P ++
Sbjct: 104 GNAKAAQEMAAKAVEVAPSDPEALAALARAEDWLGNYETAMRYALDAYELQPDNAETLAI 163
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G+ QA YI +A+ +P+++ + A G +A ++ EQ L P
Sbjct: 164 ISEIYTDVGNLQQAEAYINRALELDPENVLALRNKAYLLDRQGRGREAIKALEQALTLAP 223
Query: 168 DNVDATKTGAQLF-LKCGQTARSIGILEEYLKVHPSDADLSVI--------DLLVAILME 218
D A+++ ++ G A +I + + L+ + D LVAI
Sbjct: 224 QRADLYLEKARIYRIRLGDFANAIAAYRSAVDASRTPQTLTALGEGLYITGDHLVAIRTL 283
Query: 219 NNAYE 223
N A E
Sbjct: 284 NQALE 288
>gi|332260278|ref|XP_003279214.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Nomascus leucogenys]
Length = 804
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 548 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 607
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 608 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 667
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 668 NVECLRFLVRLCTDLG 683
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 34/195 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 476 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 535
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 536 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 595
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 596 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 655
Query: 191 GILEEYLKVHPSDAD 205
++ + P + +
Sbjct: 656 DTYKDTHRKFPENVE 670
>gi|297274066|ref|XP_002800721.1| PREDICTED: intraflagellar transport protein 88 homolog [Macaca
mulatta]
Length = 805
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 548 NPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYRYFPCNIEVIEWL 607
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 608 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 667
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 668 NVECLRFLVRLCTDLG 683
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 476 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 535
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L +GD +QA Y ++ R
Sbjct: 536 LYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYR 595
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 596 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 655
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P ++ + LV + L + Y + L+ +E + +R
Sbjct: 656 DTYKDTHRKFPE--NVECLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 704
>gi|303271811|ref|XP_003055267.1| glycosyltransferase family 41 protein [Micromonas pusilla CCMP1545]
gi|226463241|gb|EEH60519.1| glycosyltransferase family 41 protein [Micromonas pusilla CCMP1545]
Length = 1090
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
Q G ++AI + +RL PN E +N LG+ H N + A + Y A ++P +
Sbjct: 402 QAEVGEIDRAIIAYEHTLRLKPNCAEAWNNLGVLHRERNNVERAVECYNRAIAIAPAFAQ 461
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ +G+ A+ +++AI A+P +L + GD +A SY + +
Sbjct: 462 PLNNVGVVYTTQGNAGAALEALQRAIAADPSYAVAHNNLGVLLRDTGDVPEALASYAECE 521
Query: 164 KLFPDNVDATK 174
+ PD+ +AT+
Sbjct: 522 RCSPDHRNATQ 532
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G A+ +L + L+P + G+ H ALG+H+ A+D Y + P +
Sbjct: 168 AGGRPADALLVLHRALALTPRCLDAIAKKGMCHQALGSHQDAYDAYAAVLAVEPTHALAL 227
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
+ + G ++A + A+R++P D LA+ ++G K
Sbjct: 228 RAVGALYQAHGFLSEAAGAFKSALRSDPADRPTIERLAATLTDLGTRTK 276
>gi|110598031|ref|ZP_01386311.1| TPR repeat:Peptidase S1C, HrtA/DegP2/Q/S [Chlorobium ferrooxidans
DSM 13031]
gi|110340379|gb|EAT58871.1| TPR repeat:Peptidase S1C, HrtA/DegP2/Q/S [Chlorobium ferrooxidans
DSM 13031]
Length = 535
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 2/168 (1%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG A LQ G AI + V + P + + LG A+ G + Y A L
Sbjct: 285 LGVAYLQK--GELTLAIEAYQAAVLIRPEYSQYWADLGAAYGREGQKAKKIEAYKKAVRL 342
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+ + W L VQ GD QA+ + +R P D S ++ Y + G + KA +
Sbjct: 343 NNDFALGWVNLANACVQNGDYEQAISSYMEVVRITPGDASSWYNMGHAYRDAGQFTKAVD 402
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y + L P N Q + GQ + + + L V+P+ D
Sbjct: 403 AYRKAVTLSPANAQYLIKLGQAYGMAGQDVKQLEAYRKALAVNPAYVD 450
>gi|394987155|gb|AFN42835.1| intraflagellar transport protein 88-like protein [Marsilea vestita]
Length = 486
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F +A+++ +++ + PN E +G +GN + A + I S D+ + L
Sbjct: 230 FPEALAIFRDLSKKLPNNVEVLYQIGHLSDLMGNTQQAIQWLEIVIARSMHDAGVLAFLG 289
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T + D +A YY ++ R P +I + L FYVE +EKA ++ ++ P+
Sbjct: 290 TLFKKCNDETKAHYYFNESHRVHPVNIDIITTLGGFYVEHELHEKAIPIFDLASRIQPNE 349
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
V A + + G + +I +E L HP++
Sbjct: 350 VKWQLLVAYCYRRIGSYSAAIAKHKEILVHHPNN 383
>gi|402901513|ref|XP_003913693.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Papio anubis]
Length = 824
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L +GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|297833104|ref|XP_002884434.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
gi|297330274|gb|EFH60693.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y ++ I+ +E +R+ P E Y + A G+ A +Y+IA L P
Sbjct: 94 GAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPN 153
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L + ++KG ++A +QA+ P + +L + G +A Y
Sbjct: 154 FADAWSNLASAYMRKGRFSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYL 213
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P A A LF++ G R++ +E +K+ P+ D
Sbjct: 214 EAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPD 258
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +A+ KE V+L P P+ Y LG + ALG A Y A + P + +
Sbjct: 237 GDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNCAMAFGN 296
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + ++G A+ + +QAI +P+ + +L + +IG ++A Y Q L P
Sbjct: 297 IASIYYEQGQLDLAIRHYKQAISRDPRFLEAYNNLGNALKDIGRVDEAIRCYNQCLALQP 356
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
++ A ++++ + + + L V
Sbjct: 357 NHPQAMANLGNIYMEWNMMGPASSLFKATLAV 388
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G F +A ++ + L+P L + ++ LG A G A+ Y+ A + P + W
Sbjct: 169 GRFSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSN 228
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P ++L + Y +G +A Y+ ++ P
Sbjct: 229 LAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRP 288
Query: 168 DNVDATKTGAQLFLKCGQ 185
+ A A ++ + GQ
Sbjct: 289 NCAMAFGNIASIYYEQGQ 306
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 13/219 (5%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G+F+QA+ V + +P + +G + L + A + P+ +
Sbjct: 64 YKGGDFKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAEC 123
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + +KGDT +A+ Y AI P +LAS Y+ G + +A + +Q
Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRFSEATQCCQQALS 183
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P VDA L G + E +++ P+ A L + ME+ +
Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFA--IAWSNLAGLFMESGDLNR 241
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
LQ+ + A +KLK YL LGN+ KA
Sbjct: 242 ALQYYKEA-----------VKLKPAFPDAYLNLGNVYKA 269
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP-KDSALWKQLLTF 111
A SL K + ++ L +N L + + GN+ A Y + P AL + T+
Sbjct: 378 ASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNEVLRIDPLAADALVNRGNTY 437
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ G +A+ AI P +LAS Y + G E A SY+Q L PD +
Sbjct: 438 K-EIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAITSYKQALLLRPDFPE 496
Query: 172 AT 173
AT
Sbjct: 497 AT 498
>gi|119628671|gb|EAX08266.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_a
[Homo sapiens]
Length = 796
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 696 NVECLRFLVRLCTDLG 711
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 684 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 732
>gi|320352459|ref|YP_004193798.1| hypothetical protein Despr_0323 [Desulfobulbus propionicus DSM
2032]
gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
propionicus DSM 2032]
Length = 758
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 2/201 (0%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
T L +A Q G ++A+ ++ ++ P E + LAHS L + K A + +
Sbjct: 338 ATAKLVQAKFQLKDGKNQEALDIVTGLLGDYPKWSELFFVKALAHSNLKDFKLAKEALLE 397
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A LSP S L ++Q+G+ A A++ P+D + LA + +YE
Sbjct: 398 AIKLSPGFSKAHSLLALLSLQEGEFETAKKEAATALKINPRDFQAALTLAKGVLFSKEYE 457
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
A + + ++ PDNV+ + +L Q A++ E+ L V P +A L+
Sbjct: 458 TAEKMFSELHAKVPDNVEVLGSLGLTYLAMKQEAKAKQTFEKLLAVQPDNA--KAFSFLL 515
Query: 214 AILMENNAYEKTLQHIEHAQI 234
+ ++ A ++ L + AQI
Sbjct: 516 QLAQKSGAQKEALIKMTQAQI 536
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 40 EASLQYAYG-----NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
+A+L A G +E A + E+ P+ E +LGL + A+ A +
Sbjct: 441 QAALTLAKGVLFSKEYETAEKMFSELHAKVPDNVEVLGSLGLTYLAMKQEAKAKQTFEKL 500
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA-IRAEPKDISLRIHLASFYVEIGDYE 153
+ P ++ + LL A + G +A+ + QA I PK L+I LA+ ++ +
Sbjct: 501 LAVQPDNAKAFSFLLQLAQKSGAQKEALIKMTQAQIDKAPKSAGLQILLANLFLSAQQPD 560
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
KA E Y + Q+L PDN A + + G+T ++I + L P+
Sbjct: 561 KALELYSKAQELDPDNPQPYAMSALILTRQGKTDQAIAEYRDLLAKQPN 609
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 35/159 (22%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA------------------- 80
+A+L+ G F+ AI+ + + + +PN Y G A SA
Sbjct: 140 QANLELVDGKFDAAIATVDKAIAGAPNEDRFYAIKGRALSAKQQFPAAENAFLKALELDG 199
Query: 81 --LGNHKSAFDFYVIAAHLS-------------PKDSALWKQLLTFAVQKGDTAQAMYYI 125
L NH + FYV LS P S + Q+ + + + + A ++
Sbjct: 200 KKLANHATLAAFYVERKELSKAKASLEKMAAAFPDSSQPYLQMASIELMENNPDAAEQHL 259
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY-EQIQ 163
QA++ +PK+ L+ +A FY + G +E+A + Y E IQ
Sbjct: 260 TQALKVDPKNSKLKTAIADFYSKKGKFEQAEQLYKEAIQ 298
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A + PK + QL ++ GD QA +++A +PK++ +I A FY+ E
Sbjct: 58 AIQIDPKYADARYQLGLLYLKSGDVRQAFAELQRAATLDPKNLDAKIKTAEFYLLTKKKE 117
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
A + +++ PDN DA A L L G+ +I +++ + P++
Sbjct: 118 DAQKHIDEVLVQAPDNKDALALQANLELVDGKFDAAIATVDKAIAGAPNE 167
>gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Length = 923
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+FEQAI ++ LSP P Y G ++ +G++ A Y A L P +++ +
Sbjct: 531 GDFEQAIRDGSTLIELSPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLDPGETSGYFN 590
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+G +A+ + +PKD+S ++ Y G++EKA Y++ +L P
Sbjct: 591 RGLALRARGMELEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAP 650
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D+ A F G R+I +++ P
Sbjct: 651 DHALAHLNRGYAFSAQGDHERAIADFTRSIELEP 684
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G+ E+AI+ + L P P Y G A + LG + + A L P+D + +
Sbjct: 665 AQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDPEDGSAY 724
Query: 106 KQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
FA+ G AQA+ QA++ +D S + + + GD+ A + + + +
Sbjct: 725 AN-RAFALHSLGAVAQAIEDYTQALQRLGRDASTYYNRGVAHRDRGDHRAAIDDFAEALR 783
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
+ P +V A A G R++ L E +++ P +A++ +I
Sbjct: 784 IQPSDVAAAVNLAVCRQAVGDLERALADLNEAIRLDPDEAEIYLI 828
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
Query: 45 YAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD 101
Y+Y G++++AI+ + +RL P Y GLA A G A Y + PKD
Sbjct: 559 YSYHQIGDYDRAIADYSKAIRLDPGETSGYFNRGLALRARGMELEAIQDYTSVLEIDPKD 618
Query: 102 -SALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
SAL + T+ + +G+ +A+ +AIR P ++ + GD+E+A +
Sbjct: 619 VSALVNRGFTYRL-RGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADFT 677
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ +L P N A + GQ ARSI + + + P D
Sbjct: 678 RSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDPEDG 721
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE+AI E +RL+P+ + G A SA G+H+ A + + L P++ A +
Sbjct: 633 GEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYN 692
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ-IQKLF 166
G A+++ QAI +P+D S + A +G +A E Y Q +Q+L
Sbjct: 693 RGFAWTCLGQFARSIPDFTQAIALDPEDGSAYANRAFALHSLGAVAQAIEDYTQALQRLG 752
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
D G G +I E L++ PSD +V
Sbjct: 753 RDASTYYNRGVA-HRDRGDHRAAIDDFAEALRIQPSDVAAAV 793
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
++ G QAI + ++ TY G+AH G+H++A D + A + P D A
Sbjct: 732 HSLGAVAQAIEDYTQALQRLGRDASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAA 791
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L GD +A+ + +AIR +P + + + +++ GD +AA + K
Sbjct: 792 AVNLAVCRQAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQRGDPTQAAADFAAALK 851
Query: 165 LFPDNVDATKTGAQLFLKCGQ 185
L PD A + K G+
Sbjct: 852 LNPDLPSALRLRGLALFKLGK 872
>gi|262197817|ref|YP_003269026.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262081164|gb|ACY17133.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365]
Length = 249
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK--D 101
Y G +EQA L +VV+ + P+ +N LG+ + A + + +A ++P D
Sbjct: 15 HYNAGEYEQAEQHLSQVVQSHRSFPDVFNMLGVVYHTQARFDEAEEAFEVALRINPNYTD 74
Query: 102 SALWKQLLTFAVQKGDTAQAMYY------IRQAIRAEP----KDISLRIHLASFYVEIGD 151
+AL + + K D A+ +Y RQ EP K ++ +A Y +G
Sbjct: 75 AALNLSVTCNELGKYDKAREVYSRAMTNSQRQPGNLEPFARGKLANMHAEIAEVYASMGL 134
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
Y++A YE +L PD +D +F + GQ R+I
Sbjct: 135 YDRAVREYEHALELCPDFIDLRTRLGNIFREKGQPDRAI 173
>gi|119628677|gb|EAX08272.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_g
[Homo sapiens]
gi|194374639|dbj|BAG62434.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 548 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 607
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 608 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 667
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 668 NVECLRFLVRLCTDLG 683
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 476 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 535
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 536 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 595
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 596 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 655
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P ++ + LV + L + Y + L+ +E + +R
Sbjct: 656 DTYKDTHRKFPE--NVECLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 704
>gi|355754559|gb|EHH58460.1| hypothetical protein EGM_08320 [Macaca fascicularis]
Length = 830
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L +GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|397526293|ref|XP_003833067.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Pan paniscus]
Length = 805
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 548 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 607
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 608 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 667
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 668 NVECLRFLVRLCTDLG 683
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 476 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNQLDEALDCFLKLHAILRNSAEV 535
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 536 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 595
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 596 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 655
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 656 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 704
>gi|333997950|ref|YP_004530562.1| hypothetical protein TREPR_2517 [Treponema primitia ZAS-2]
gi|333738980|gb|AEF84470.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
Length = 349
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + A++ E +RL N YN GL + +G+++ A + + +A + P + ++
Sbjct: 81 GEYTWAMADYTEAIRLKQNYTFAYNNRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRN 140
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++KG+ QA+ QA+R P Y G+Y+KA Y Q ++ P
Sbjct: 141 RGEIHLRKGEYDQAILDFNQAVRLSPGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINP 200
Query: 168 DNVDATKTGAQLFLKCGQTARS 189
+ V+A ++ G R+
Sbjct: 201 NYVEALINRGNIYYDVGYPDRA 222
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 4/159 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++E+A + + + PN + Y G H G + A + A LSP + +
Sbjct: 115 GDYERARNDFTMAITMDPNYAKAYRNRGEIHLRKGEYDQAILDFNQAVRLSPGYAKAFGS 174
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL-- 165
KG+ +A+ QAIR P + I+ + Y ++G ++A Y+++ +
Sbjct: 175 RGDAYANKGEYDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRAKVDYDRVISINL 234
Query: 166 --FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
PD A + G ++I E +K++P+
Sbjct: 235 NAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIKLNPN 273
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 29 KLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN-HKS 86
+LSPG K G YA G +++A++ + +R++PN E G + +G ++
Sbjct: 163 RLSPGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRA 222
Query: 87 AFDF-YVIAAHLS--PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
D+ VI+ +L+ P + +GD +A+ +AI+ P H
Sbjct: 223 KVDYDRVISINLNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRG 282
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARS 189
+ Y IG+Y A + + + ++ P+ A + + G+ A++
Sbjct: 283 AVYANIGEYRLAIDDFNRAIEINPNYATAYISRGKALSYLGEYAQA 328
>gi|443663595|ref|ZP_21133165.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|159027098|emb|CAO89283.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443331872|gb|ELS46512.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 363
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ ++ L N ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVKNGNYGEAIAIYEQAAALDGNNARIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYNNAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ I L P+N A + + ++ +++ + L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWILALDPNNQQAHEIMGKALIEQNKSSEAFDFLQKSLQRFPNNSE 211
>gi|755486|gb|AAA86720.1| mutations in the mouse Tg737 gene cause polycystic kidney disease
[Homo sapiens]
Length = 824
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|428223797|ref|YP_007107894.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
gi|427983698|gb|AFY64842.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
Length = 4135
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+++QAI+ ++ + L P+ + + LG A A A Y A L P + +
Sbjct: 2266 GDWQQAIAAYRQAIDLQPDFAQAHYNLGTALQAQKRDDEALAAYQRAIALDPGLADAYNN 2325
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + D QA+ RQAI +P+ +L S + YE A Y+Q L P
Sbjct: 2326 LGNLYRSRRDIPQAIAAYRQAIDLQPQAAIYHSNLGSILQQADQYEGAIAHYQQAIDLDP 2385
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
A + G+ R+I + ++ L+ P
Sbjct: 2386 QLSVARYNLGNAYYDLGEFDRAIALYQQVLRADP 2419
Score = 55.8 bits (133), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
++A++ + + L P L + YN LG + + + A Y A L P+ +A++ L
Sbjct: 2303 DEALAAYQRAIALDPGLADAYNNLGNLYRSRRDIPQAIAAYRQAIDLQPQ-AAIYHSNLG 2361
Query: 111 FAVQKGDTAQ-AMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+Q+ D + A+ + +QAI +P+ R +L + Y ++G++++A Y+Q+ + PD
Sbjct: 2362 SILQQADQYEGAIAHYQQAIDLDPQLSVARYNLGNAYYDLGEFDRAIALYQQVLRADPDC 2421
Query: 170 VDATKTGAQLFLKCGQTAR 188
V A A ++L+ G R
Sbjct: 2422 VQAQFAMALVWLQQGDFRR 2440
Score = 50.4 bits (119), Expect = 0.003, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G+A+L + GN+ AI+ ++++ P+ ++ LGLA A+ + A Y A L
Sbjct: 626 GQAAL--SSGNYVGAIAAYQQLLAQWPDTALAHHYLGLALQAVDRYAEARQHYERAIALD 683
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
A L + +GD A+ + R AI P + ++L S E GD E+A
Sbjct: 684 ASLVATHINLGSVCQLQGDEDTAIAHYRAAIARRPDVAAAHLNLGSILKERGDLEEALLH 743
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ +L D DA ++ G A +I E L ++P D
Sbjct: 744 CKEAVRLQSDLADAHHNLGVVYQGLGDPAAAIACYERALALNPEHVD 790
Score = 48.9 bits (115), Expect = 0.008, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 4/204 (1%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
++P + +L EA + G +A + V+R P+ P + LG+ G+ +SA
Sbjct: 1107 VTPAIAALLSEAVALHQAGQRAEAAQRYQAVLRQDPHQPNALHLLGVVAYQSGDPQSAIA 1166
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
+Y + L Q GD ++A+++ +QAI +P +LA+ +
Sbjct: 1167 YYRRSLAQQADFPEAHYNLAIALSQMGDLSRAIHHYQQAIAQKPDYADAHYNLATALKQT 1226
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS-V 208
+A Y +L P DA A + GQ +I + Y + D++L+
Sbjct: 1227 QQLSEAVTHYRAALRLAPTLADAHARLASTLQELGQPDDAI---DHYRQAVTLDSNLAGA 1283
Query: 209 IDLLVAILMENNAYEKTLQHIEHA 232
+ L +L + +E +H + A
Sbjct: 1284 HNNLANLLRSRDDFEGASRHYQAA 1307
Score = 44.3 bits (103), Expect = 0.21, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +AI+ ++V+ L P+ PE +N L A G A Y A L P A
Sbjct: 2815 GQLTEAIAHYRQVLDLRPDYPEAHNNLANALKEQGQWSEAIAHYQRALALRPDFVAAHNN 2874
Query: 108 LLTFAVQKGD-TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L A+Q+ D +A+ + R+AI +P +L + D+ A +Y Q ++
Sbjct: 2875 LAN-ALQRLDRIEEAVAHYRRAIALQPDYAEAYNNLGNALQSQLDHPGAIAAYRQALQIK 2933
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILE 194
PD +A A + L G A+ G E
Sbjct: 2934 PDYAEAHLGLAAVHLIQGDLAQGFGEYE 2961
Score = 43.9 bits (102), Expect = 0.26, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 8/202 (3%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A + +A + + L +L T+ LG G+ +A Y A P +A
Sbjct: 665 AVDRYAEARQHYERAIALDASLVATHINLGSVCQLQGDEDTAIAHYRAAIARRPDVAAAH 724
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L + ++GD +A+ + ++A+R + +L Y +GD A YE+ L
Sbjct: 725 LNLGSILKERGDLEEALLHCKEAVRLQSDLADAHHNLGVVYQGLGDPAAAIACYERALAL 784
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILE---EYLKVHPSDA-----DLSVIDLLVAILM 217
P++VD+ A +L+ GQ A E K P D D + +L
Sbjct: 785 NPEHVDSHFGRAIAWLQQGQWAEGWAEYEWRWRSPKTPPRDFAQPRWDGGNLTGKTILLH 844
Query: 218 ENNAYEKTLQHIEHAQIVRFSG 239
Y T+Q I +A + + G
Sbjct: 845 AEQGYGDTIQFIRYAALAKAQG 866
Score = 43.1 bits (100), Expect = 0.44, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 38/189 (20%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +AI+ + V + P E + LG+A A G+ +A D Y A L P +A
Sbjct: 1722 GHSPEAIACYRTAVDVCPTFAEGHLRLGVALRAQGD-PAALDHYQKALALDPHLTAAHYN 1780
Query: 108 L-----------------------------------LTFAVQKGDTAQAMYYIRQAIRAE 132
L L + +GD A+ Y R A+R +
Sbjct: 1781 LGNAYQTDQPQQAIAAYQQALALQPDFAPAHYNLANLLRSQDQGDRAEQHY--RLALRFQ 1838
Query: 133 PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
P +LAS Y+E DY A Y+Q+ L P+ +A K G+ + +I
Sbjct: 1839 PDHFKALHNLASLYLERQDYRAAIAHYQQVLALRPELAEAQDHLGIALRKEGRLSEAIAA 1898
Query: 193 LEEYLKVHP 201
+ L ++P
Sbjct: 1899 HHQALALNP 1907
Score = 42.7 bits (99), Expect = 0.66, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 56/138 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN AI+ ++ + L P+ + + LG++H +LG ++A Y A L P +
Sbjct: 188 GNLPAAIARYEQAIALRPDYTDAHLNLGVSHQSLGQLEAAEACYRHAITLDPGAATAHHN 247
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L A+A+ RQ++ +P + +L GD A + Q L P
Sbjct: 248 LGLVLQALNCPAEAIAAHRQSLELDPNNAEALNNLGVALKRTGDVAGAIAHHRQALALRP 307
Query: 168 DNVDATKTGAQLFLKCGQ 185
D V+ L GQ
Sbjct: 308 DYVEGHHNLGIALLTAGQ 325
Score = 42.7 bits (99), Expect = 0.68, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 68/168 (40%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
L A + G E AI+LL+ +V + E + LGLA+ + +A D Y A L
Sbjct: 2737 LALAIAHLSAGQPEAAIALLELLVPQYSTVAEVHYLLGLAYRRQHHLIAAQDHYQRAIAL 2796
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P L Q+G +A+ + RQ + P +LA+ E G + +A
Sbjct: 2797 QPNHVEAHLGLGVALKQQGQLTEAIAHYRQVLDLRPDYPEAHNNLANALKEQGQWSEAIA 2856
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y++ L PD V A A + + ++ + + P A+
Sbjct: 2857 HYQRALALRPDFVAAHNNLANALQRLDRIEEAVAHYRRAIALQPDYAE 2904
Score = 39.3 bits (90), Expect = 6.6, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 57/135 (42%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A++ ++ + L P + + LG+A S + + A Y L P+ A L T
Sbjct: 3295 EAALAHYRQAIALDPGYADAHYNLGVALSCHSDLEGAIACYQRVLVLQPRYFAALHNLAT 3354
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
Q+ +A+ + QA++ +P +L + + + E A Y++ L PD
Sbjct: 3355 AYHQQQQFEEAIAFYEQALQLQPDHAEAHYNLGLAHRQCNNLEAALAHYDRAIALQPDYA 3414
Query: 171 DATKTGAQLFLKCGQ 185
+A A L G+
Sbjct: 3415 EAHWNRALALLLAGR 3429
Score = 39.3 bits (90), Expect = 7.1, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 30 LSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
L PG+ +L + + QAI+ ++ + L P ++ LG ++ A
Sbjct: 2315 LDPGLADAYNNLGNLYRSRRDIPQAIAAYRQAIDLQPQAAIYHSNLGSILQQADQYEGAI 2374
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
Y A L P+ S L G+ +A+ +Q +RA+P + + +A +++
Sbjct: 2375 AHYQQAIDLDPQLSVARYNLGNAYYDLGEFDRAIALYQQVLRADPDCVQAQFAMALVWLQ 2434
Query: 149 IGDYEKAAESYE 160
GD+ + YE
Sbjct: 2435 QGDFRRGFAGYE 2446
Score = 38.9 bits (89), Expect = 8.2, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 72/207 (34%), Gaps = 36/207 (17%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P +LG + Y G+ + AI+ + + + PE + L +A S +G+ A Y
Sbjct: 1145 PNALHLLGVVA--YQSGDPQSAIAYYRRSLAQQADFPEAHYNLAIALSQMGDLSRAIHHY 1202
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG- 150
A P + L T Q ++A+ + R A+R P LAS E+G
Sbjct: 1203 QQAIAQKPDYADAHYNLATALKQTQQLSEAVTHYRAALRLAPTLADAHARLASTLQELGQ 1262
Query: 151 ---------------------------------DYEKAAESYEQIQKLFPDNVDATKTGA 177
D+E A+ Y+ L PD +
Sbjct: 1263 PDDAIDHYRQAVTLDSNLAGAHNNLANLLRSRDDFEGASRHYQAALALLPDFAEGHYNLG 1322
Query: 178 QLFLKCGQTARSIGILEEYLKVHPSDA 204
+ + G+ +I ++ L + P A
Sbjct: 1323 GVLKELGRLPEAIAAYQQALDLKPGLA 1349
>gi|126659115|ref|ZP_01730255.1| hypothetical protein CY0110_04878 [Cyanothece sp. CCY0110]
gi|126619643|gb|EAZ90372.1| hypothetical protein CY0110_04878 [Cyanothece sp. CCY0110]
Length = 380
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI+ ++ L + + ++ + HS GN+++A +Y A + ++ +
Sbjct: 73 GDYQRAIATYEQAASLDNDNAKIFSGIAYLHSQQGNYQAAVKYYQQALSIDSSNANFYYA 132
Query: 108 LLTFAVQKGDT---AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L GD A A YY AI+ P+ + I L + DYE AAE+Y+++
Sbjct: 133 LGDSLANTGDNNNAASAYYY---AIQLNPQSVKSYIGLGVVLLRQEDYEGAAEAYKRVIA 189
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P+N +A L+ Q +++ L ++ D DL + LL ++ E
Sbjct: 190 LDPNNPEAFAIMGSSLLQQKQLDQAVQYLGNAVERFSGDVDLRL--LLATAYLQQGQLEL 247
Query: 225 TLQHIEHAQIVRFSGKELPLKL 246
+ + A+ + S ++ LK+
Sbjct: 248 GKEQLTRAERLDPSNTKIQLKI 269
>gi|436735950|ref|YP_007318078.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428267551|gb|AFZ33495.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 222
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+ +AS Q GNF+ AI +V+ L+P+ E Y GLA++ LG+++ A + + A
Sbjct: 39 LFTQASTQLERGNFQGAIQDFSQVIELNPDYMEAYCERGLAYAFLGDYQEAIEGFRQAIE 98
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
+ P + + T GD A+ + +R P + + + + ++E+A
Sbjct: 99 IDPNHVDAYARWGTALASVGDLQGAIEKFDETLRLAPNFLDAYYNRGLAHYSLNNHEQAV 158
Query: 157 ESYEQIQKLFP 167
E + Q+ +L P
Sbjct: 159 EDFTQVIQLEP 169
>gi|297693599|ref|XP_002824108.1| PREDICTED: LOW QUALITY PROTEIN: intraflagellar transport protein 88
homolog [Pongo abelii]
Length = 840
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 583 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 642
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 643 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 702
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 703 NVECLRFLVRLCTDLG 718
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 57/125 (45%)
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
+ N A ++ + + P D + +L ++GD +QA Y ++ R P +I +
Sbjct: 581 MENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIE 640
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
L ++Y++ +EKA + +E+ + P V A F + G +++ ++ +
Sbjct: 641 WLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKF 700
Query: 201 PSDAD 205
P + +
Sbjct: 701 PENVE 705
>gi|113478271|ref|YP_724332.1| hypothetical protein Tery_4945 [Trichodesmium erythraeum IMS101]
gi|110169319|gb|ABG53859.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 750
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
+P ++ +A L Y G F +A+ ++V+ L PN Y TL A G A
Sbjct: 12 TPNFETLIQQAELYYTQGQFSEAMGCCRQVLTLQPNWAPAYVTLANILQAQGKVSEAISV 71
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y A +P S + L T ++G +A+ +AI+ +P+ + +LA + +G
Sbjct: 72 YYRAIEFNPDLSQAYINLGTMFYRQGKLEEAIANYYKAIQLQPEMAAAYWNLAKVWEHLG 131
Query: 151 DYEKAAESYEQIQKLFPD--NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
++A S ++ +L P V+ + K G+ +I + + +K+ P+ A+
Sbjct: 132 KSDQAIASQQKALELNPSLGGVEFNLSEGYRLAKEGKLEEAIAVWQMAIKLKPNLAE--A 189
Query: 209 IDLLVAILMENNAYEKTLQHIEHA 232
+ IL + + LQ+++ A
Sbjct: 190 YGQIGMILRNKGKFSEALQNLKKA 213
>gi|109120148|ref|XP_001086373.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Macaca mulatta]
gi|109120152|ref|XP_001086485.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Macaca mulatta]
Length = 824
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L +GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|440754168|ref|ZP_20933370.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440174374|gb|ELP53743.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 363
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ ++ L N + ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVKNGNYGEAIAIYEQAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYDNAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ I L P+N A + + ++ +++ + L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWILALDPNNQQAHEIMGKALIEQNKSSEAFDFLQKSLQRFPNNSE 211
>gi|397526291|ref|XP_003833066.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Pan paniscus]
Length = 824
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNQLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1056
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ L + +RL P TYN G+A G + A Y A L PKD+ +
Sbjct: 40 GAYDRAIADLNQALRLDPKSASTYNDRGIAFKFKGEYDRAIADYDQALRLDPKDAVFYNN 99
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPK-DISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
KG+ +A+ QA+ P+ I+ + F ++ G++++A Y+Q +L
Sbjct: 100 RGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDVFRIK-GEHDRAIADYDQALQLD 158
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
P A F + + R+I ++ L++ P DA
Sbjct: 159 PKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDA 196
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + ++ +P YN GLA G H A Y A L PK +A +
Sbjct: 618 GEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAFNN 677
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+KG+ +A+ + QA+R +P + H + + GD ++A + +L P
Sbjct: 678 RGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRGTAFRHKGDLDRALADLNEAVRLNP 737
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
DA + F G+ R++ E +++ P
Sbjct: 738 KYADAYQERGVTFQARGEPDRALADFAEAVRLKP 771
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + +RL P YN GL + A + A L PKD+ +++
Sbjct: 414 GEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRN 473
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA++ +PK ++ + + G+Y +A Y+Q +L P
Sbjct: 474 RGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDP 533
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+F G+ R+I ++ L++ P
Sbjct: 534 KQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDP 567
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
++QAI+ + +RL P Y G A + G + A Y A L PK +A+
Sbjct: 450 YDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRG 509
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+KG+ +A+ QA++ +PK + + + G++++A Y+Q +L P
Sbjct: 510 LAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKY 569
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ A +F G+ R+I ++ L++ P
Sbjct: 570 IFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDP 601
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 67/160 (41%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G + +A++ + ++L P Y G G H+ A Y A L PK
Sbjct: 377 YGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLA 436
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ K + QA+ QA+R +PKD + + + G+Y++A +Y+Q +
Sbjct: 437 YNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQ 496
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
L P F + G+ R++ ++ L++ P A
Sbjct: 497 LDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQA 536
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 11/257 (4%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G + +A++ + ++L P Y G G H A Y A L PK
Sbjct: 513 YRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFA 572
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ KG+ +A+ Q +R +PK + + G+Y++A Y+Q +
Sbjct: 573 YNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQ 632
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
P V A F + G+ R+I EE L++ P A + + A L + Y++
Sbjct: 633 HNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSA--AAFNNRGAALNKKGEYDR 690
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID--HADLI 282
+ ++ A ++ G P G + G++++A ADL ++ +AD
Sbjct: 691 AITDLDQALRLK-PGFANP---HYHRGTAFRHKGDLDRA---LADLNEAVRLNPKYADAY 743
Query: 283 TEVADTLMSLGHSNSAL 299
E T + G + AL
Sbjct: 744 QERGVTFQARGEPDRAL 760
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ + +RL P YN GL + A + A L PKD+ +++
Sbjct: 278 GEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRN 337
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA++ + K ++ + + G+Y +A Y+Q +L P
Sbjct: 338 RGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDP 397
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+F G+ R+I ++ L++ P
Sbjct: 398 KQAIVYTNRGDVFRIKGEHERAIADYDQALRLDP 431
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 65/160 (40%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G + +A++ + ++L P Y G G H+ A Y A L PK
Sbjct: 241 YGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLA 300
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ K + QA+ QA+R +PKD + + + G+Y++A +Y+Q +
Sbjct: 301 YNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQ 360
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
L F G+ R++ ++ L++ P A
Sbjct: 361 LDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQA 400
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 108/255 (42%), Gaps = 19/255 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI+ + ++L P YN GL+ + A + A L PKD+ +++
Sbjct: 142 GEHDRAIADYDQALQLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYRN 201
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA++ + K ++ + + G+Y +A Y+Q +L P
Sbjct: 202 RGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDP 261
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+F G+ R+I ++ L++ P L+ + + I + Y++ +
Sbjct: 262 KQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPK-YKLAYNNRGL-IFQNKSEYDQAIA 319
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
+ A L+L K + Y G+ +++ ++ AI + D ++ D
Sbjct: 320 DFDQA-----------LRLDPKDAVIYRNRGDAFRSK-----GEYDRAIANYDQALQL-D 362
Query: 288 TLMSLGHSNSALKYY 302
+ + H+N L +Y
Sbjct: 363 SKYAAVHNNRGLAFY 377
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G ++AI+ + + L+P Y G G H A Y A L PK +
Sbjct: 106 AKGEHDRAIADFNQALTLNPRYSIAYKNRGDVFRIKGEHDRAIADYDQALQLDPKYKLAY 165
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+K + +A+ QA+R +PKD + + + G+Y++A +Y+Q +L
Sbjct: 166 NNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQL 225
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
F G+ R++ ++ L++ P A
Sbjct: 226 DSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQA 264
>gi|28329439|ref|NP_006522.2| intraflagellar transport protein 88 homolog isoform 2 [Homo
sapiens]
Length = 824
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|28558993|ref|NP_783195.2| intraflagellar transport protein 88 homolog isoform 1 [Homo
sapiens]
gi|206729873|sp|Q13099.2|IFT88_HUMAN RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
Full=Recessive polycystic kidney disease protein Tg737
homolog; AltName: Full=Tetratricopeptide repeat protein
10; Short=TPR repeat protein 10
Length = 833
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 696 NVECLRFLVRLCTDLG 711
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 684 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 732
>gi|410220826|gb|JAA07632.1| intraflagellar transport 88 homolog [Pan troglodytes]
Length = 833
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 696 NVECLRFLVRLCTDLG 711
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 684 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 732
>gi|393908629|gb|EJD75140.1| OSM-5 protein [Loa loa]
Length = 704
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L + L+P P + L + A G+ AF + + P + A + L +
Sbjct: 447 QAIELYSQANSLAPTDPAILSKLASIYDAEGDKSQAFQCHYDSYRYFPSNIATIEWLGAY 506
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A Y +A EP +I ++ +AS G+Y+KA E Y+QI FP+N++
Sbjct: 507 YIDAQYPEKAATYFEKASIMEPNEIKWQLMMASCLRRSGNYQKAFELYQQIHGRFPENIE 566
Query: 172 ATKTGAQLFLKCG 184
K A++ G
Sbjct: 567 CLKFLARICTDLG 579
>gi|312073163|ref|XP_003139396.1| TPR Domain containing protein [Loa loa]
Length = 418
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L + L+P P + L + A G+ AF + + P + A + L +
Sbjct: 134 QAIELYSQANSLAPTDPAILSKLASIYDAEGDKSQAFQCHYDSYRYFPSNIATIEWLGAY 193
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A Y +A EP +I ++ +AS G+Y+KA E Y+QI FP+N++
Sbjct: 194 YIDAQYPEKAATYFEKASIMEPNEIKWQLMMASCLRRSGNYQKAFELYQQIHGRFPENIE 253
Query: 172 ATKTGAQLFLKCG 184
K A++ G
Sbjct: 254 CLKFLARICTDLG 266
>gi|296447238|ref|ZP_06889168.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
gi|296255297|gb|EFH02394.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
Length = 789
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ L+ + L+P +N+L A ALG H+ A A L P+ L
Sbjct: 104 GDALTGAELIGRAMALTPGAAVHHNSLATAFRALGRHEDALREARAAVALRPRSGELRCN 163
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T + G +A+ + R A P+ + +LA+ E+G +A E++ +L P
Sbjct: 164 LATMLDELGQREEAILHYRSAADCAPERAEIWYNLANLLAEVGPAREAEEAFANAVRLAP 223
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
V A + ++ G+ A ++ L E ++ P + S + L A L E ++ L
Sbjct: 224 GFVAAQGNYGRWLMRRGRFAEAVERLAEAARLAPGEP--SYWNNLAAALQELGSFADALA 281
Query: 228 HIEHA 232
+ A
Sbjct: 282 CYQRA 286
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 1/182 (0%)
Query: 25 GSKNKLSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
G L+PG + + A G E A+ + V L P E L LG
Sbjct: 114 GRAMALTPGAAVHHNSLATAFRALGRHEDALREARAAVALRPRSGELRCNLATMLDELGQ 173
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
+ A Y AA +P+ + +W L + G +A A+R P ++ + +
Sbjct: 174 REEAILHYRSAADCAPERAEIWYNLANLLAEVGPAREAEEAFANAVRLAPGFVAAQGNYG 233
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ + G + +A E + +L P A + G A ++ + L + P
Sbjct: 234 RWLMRRGRFAEAVERLAEAARLAPGEPSYWNNLAAALQELGSFADALACYQRALALDPRH 293
Query: 204 AD 205
AD
Sbjct: 294 AD 295
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 70/184 (38%), Gaps = 2/184 (1%)
Query: 1 MELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEV 60
M + GG + R+ K N + + +A ++ G ++A +L + +
Sbjct: 25 MRVAGAGGVARTERRGETKV--VANHTNAVPMTIDAAFRDARARHEAGRLDEAETLYRAI 82
Query: 61 VRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQ 120
+ P+ E + LGL G+ + + A L+P + L T G
Sbjct: 83 LGAEPSHAEALHLLGLVRVERGDALTGAELIGRAMALTPGAAVHHNSLATAFRALGRHED 142
Query: 121 AMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLF 180
A+ R A+ P+ LR +LA+ E+G E+A Y P+ + A L
Sbjct: 143 ALREARAAVALRPRSGELRCNLATMLDELGQREEAILHYRSAADCAPERAEIWYNLANLL 202
Query: 181 LKCG 184
+ G
Sbjct: 203 AEVG 206
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L+PG G G F +A+ L E RL+P P +N L A LG+ A
Sbjct: 220 RLAPGFVAAQGNYGRWLMRRGRFAEAVERLAEAARLAPGEPSYWNNLAAALQELGSFADA 279
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
Y A L P+ + + L GD +A+ + A A+P+ + RI
Sbjct: 280 LACYQRALALDPRHADAFYNLGCLLHLAGDADKAVAHHVGAAAADPRHGAARI 332
>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
MBIC11017]
Length = 810
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+++A G ++ AIS E + L P ETYN G A LG +++A Y A L P
Sbjct: 416 GEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYRKAIRLQPN 475
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + L + +G A+ + +AI+AE +S ++ S+ +GD E A + +E
Sbjct: 476 QAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSVLGDPEGAEQDWE 535
Query: 161 QIQKL 165
+ KL
Sbjct: 536 KALKL 540
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+ Q A NFEQA+ L + + L ETY +G A+ + FD + PK
Sbjct: 355 GNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPEAI----AQFDTLL---KQQPK 407
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+A +++ G A+ +A+ +PKD H VE+G YE A Y
Sbjct: 408 TAAAFRERGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYR 467
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
+ +L P+ AQ +L G G LE +K
Sbjct: 468 KAIRLQPNQ-------AQGYLNLGSVFFVQGKLEAAVK 498
>gi|148252588|ref|YP_001237173.1| hypothetical protein BBta_1011 [Bradyrhizobium sp. BTAi1]
gi|146404761|gb|ABQ33267.1| putative TPR repeat containing protein [Bradyrhizobium sp. BTAi1]
Length = 800
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 137/363 (37%), Gaps = 40/363 (11%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLS-PNLP-ETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
A L Y GN +QA SLL+ VV+ + P+ N L + GN + A
Sbjct: 316 ADLDYLQGNLDQATSLLESVVKTAAPDRALAAKNRLAQVYIRRGNTEMANKLVSEVLEKD 375
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
+++ K + G A+ +R+A+ EPK L + + + G E AA
Sbjct: 376 RRNTGALKLRAAMRLDAGQVDGAIADLREALNNEPKSPELLLMFGAAFERSGKAELAARQ 435
Query: 159 YEQIQKL-------------FPDNV-DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
Y K F V D + L + RS+ +L+ +V +
Sbjct: 436 YADAAKFSNFAPPFVLPYAAFLQGVPDLAQAETVLLESIARNPRSLPLLQALAQVRIARK 495
Query: 205 D----LSVIDLL--------------VAILMENNAYEKTLQHIEHAQIVRFSGKELPLKL 246
+ L+V D++ A L N E ++ +E A P L
Sbjct: 496 NWTGALAVADVIRGAEDSAGIADQVRAAALAGQNKLEASVASLEEAHAAAPDAVR-PATL 554
Query: 247 KVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLE 306
V A YLR G EKAE L D+ K D + L+ + T + G ++ A + +
Sbjct: 555 LVAA---YLRSGRPEKAEALLTDM-LKRRPDESALLLLMGQTQSAKGRTDEAKTIFKRVI 610
Query: 307 TNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEE 366
T N Y L+E Y + K A + L DN++ RL+ ASL L +
Sbjct: 611 TQQ-PKNEAAYRSLSELYANEKSFNEAASILKEGLKENPDNLNLRLSQASLSLARGDNDG 669
Query: 367 AIT 369
AI
Sbjct: 670 AIA 672
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 61/134 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A +LL ++++ P+ +G SA G A + PK+ A ++
Sbjct: 563 GRPEKAEALLTDMLKRRPDESALLLLMGQTQSAKGRTDEAKTIFKRVITQQPKNEAAYRS 622
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +A +++ ++ P +++LR+ AS + GD + A +YE + K P
Sbjct: 623 LSELYANEKSFNEAASILKEGLKENPDNLNLRLSQASLSLARGDNDGAIAAYEAVLKDDP 682
Query: 168 DNVDATKTGAQLFL 181
+ + A A L L
Sbjct: 683 NALLAVNNLASLLL 696
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV-IAAH 96
L +ASL A G+ + AI+ + V++ PN N L K++ D V +A
Sbjct: 655 LSQASLSLARGDNDGAIAAYEAVLKDDPNALLAVNNLASLLLDERTDKASLDRAVQLAER 714
Query: 97 LSPKDSALWKQLLTFA-VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L D ++ +A V++G+TA+A+ + I P + R HLA Y+ +G +A
Sbjct: 715 LKSSDLPQFQDTYAWAQVKRGNTAEAVKLLESVIARVPSFSAARYHLAQGYLAMG---RA 771
Query: 156 AESYEQIQKLFPDNVDAT 173
A++ EQ++ D T
Sbjct: 772 AQANEQLKLALGAEPDGT 789
>gi|21228903|ref|NP_634825.1| hypothetical protein MM_2801 [Methanosarcina mazei Go1]
gi|20907434|gb|AAM32497.1| hypothetical protein MM_2801 [Methanosarcina mazei Go1]
Length = 359
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 2/198 (1%)
Query: 35 TKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
T + ++ L Y G FE ++ +++V+ + P+ + G+ S + K A D Y A
Sbjct: 134 TALFQKSLLLYKAGRFENSLKFIEQVLEIVPDDFRVWYNKGVILSDMVLLKEALDAYDRA 193
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
L P +W G +A+ + + +PK S + E+
Sbjct: 194 IELEPSFEIVWDNKGVVLAGLGRLEEALETYEKVLLRDPKYAEAWAGKGSVLSALDRKEE 253
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
A E+Y K+ PD +A K L K G+ +++ + L+ P D L LV
Sbjct: 254 ALEAYSSALKIRPDYPEALKAAGNLLFKLGRYEKALSTYDMALQASPEDPQLWAGRGLV- 312
Query: 215 ILMENNAYEKTLQHIEHA 232
L E N E+ LQ+ A
Sbjct: 313 -LSELNKQEEALQNCNRA 329
>gi|430747186|ref|YP_007206315.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
gi|430018906|gb|AGA30620.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
Length = 827
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +AI L++V+R+ P LPET N LGL G + A + A L P+ + +
Sbjct: 154 GKWGEAIVALEQVLRIKPELPETLNDLGLLLEMTGQLEEAVVRFQAAIRLRPEFAGAYSN 213
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ Q G +A+ R+A+R +P +L + G +++A + + +L P
Sbjct: 214 MSVVLKQLGRLDEAITSGREAVRLDPGFAGAHNNLGVILEKEGGWDEATTCFHEALRLDP 273
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
V+A + + G+ + I + + + P A+
Sbjct: 274 RFVEAYYNLGSVLSRLGRFEDAESICRQAITLDPDSAE 311
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++A + E +RL P E Y LG S LG + A A L P DSA
Sbjct: 256 GGWDEATTCFHEALRLDPRFVEAYYNLGSVLSRLGRFEDAESICRQAITLDP-DSAEAHH 314
Query: 108 LLTFAV-QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L FA+ ++G +A R+AI+ +P+ + ++L S + G ++A + +L
Sbjct: 315 NLAFALSERGQLTEAETNYRRAIQLKPEFVDPYVNLTSVLGKFGKLDEAEACSREAVRLD 374
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
P+ +A + ++ G A ++ E +V P+
Sbjct: 375 PNRSEALVNLGFVLIEKGHIAEALAAYREAERVDPN 410
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+LG A + GN A+ ++ +RL P+ E N LG+ + G+ + A +++
Sbjct: 43 LLGVAC--HGLGNLTGALGAFQQTLRLQPDHAEAQNHLGIVWAQAGSLEEAVRCFLLTLQ 100
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L P +K L ++G +A+ R+ + +P HL + G + +A
Sbjct: 101 LQPNSLDAYKNLAVTFERQGRLDEAVACDRKVVELKPDLAEAHRHLGVLLRKQGKWGEAI 160
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA----DLSVI 209
+ EQ+ ++ P+ + L GQ ++ + +++ P A ++SV+
Sbjct: 161 VALEQVLRIKPELPETLNDLGLLLEMTGQLEEAVVRFQAAIRLRPEFAGAYSNMSVV 217
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI+ +E VRL P +N LG+ G A + A L P+ +
Sbjct: 222 GRLDEAITSGREAVRLDPGFAGAHNNLGVILEKEGGWDEATTCFHEALRLDPRFVEAYYN 281
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + + G A RQAI +P +LA E G +A +Y + +L P
Sbjct: 282 LGSVLSRLGRFEDAESICRQAITLDPDSAEAHHNLAFALSERGQLTEAETNYRRAIQLKP 341
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
+ VD + K G+ + E +++ P+ ++ V
Sbjct: 342 EFVDPYVNLTSVLGKFGKLDEAEACSREAVRLDPNRSEALV 382
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G QA ++V+ P+ + LG+A LGN A + L P +
Sbjct: 18 GRIAQAEQAYRQVLSADPSYIPAWYLLGVACHGLGNLTGALGAFQQTLRLQPDHAEAQNH 77
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L Q G +A+ ++ +P + +LA + G ++A ++ +L P
Sbjct: 78 LGIVWAQAGSLEEAVRCFLLTLQLQPNSLDAYKNLAVTFERQGRLDEAVACDRKVVELKP 137
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D +A + L K G+ +I LE+ L++ P
Sbjct: 138 DLAEAHRHLGVLLRKQGKWGEAIVALEQVLRIKP 171
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE A S+ ++ + L P+ E ++ L A S G A Y A L P+ +
Sbjct: 290 GRFEDAESICRQAITLDPDSAEAHHNLAFALSERGQLTEAETNYRRAIQLKPEFVDPYVN 349
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + + G +A R+A+R +P ++L +E G +A +Y + +++ P
Sbjct: 350 LTSVLGKFGKLDEAEACSREAVRLDPNRSEALVNLGFVLIEKGHIAEALAAYREAERVDP 409
Query: 168 DN 169
++
Sbjct: 410 NS 411
>gi|332260276|ref|XP_003279213.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Nomascus leucogenys]
Length = 832
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 696 NVECLRFLVRLCTDLG 711
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 34/195 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDAD 205
++ + P + +
Sbjct: 684 DTYKDTHRKFPENVE 698
>gi|119628675|gb|EAX08270.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_e
[Homo sapiens]
Length = 824
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|119628674|gb|EAX08269.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
[Homo sapiens]
gi|119628678|gb|EAX08273.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
[Homo sapiens]
Length = 833
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 696 NVECLRFLVRLCTDLG 711
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 684 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 732
>gi|428202161|ref|YP_007080750.1| Tfp pilus assembly protein PilF [Pleurocapsa sp. PCC 7327]
gi|427979593|gb|AFY77193.1| Tfp pilus assembly protein PilF [Pleurocapsa sp. PCC 7327]
Length = 381
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ AI++ + L P+ ++ +G + GN +A Y A L P + L+
Sbjct: 74 GDYANAIAIYERAAYLDRQNPKIFSGIGYLQARQGNFTAAAKAYQQALSLDPNNPELYYA 133
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L GD A A + P+D+ I L ++ GDY +A E+Y+++ L P
Sbjct: 134 LGYSLANAGDYPNAAVAYYYAAKLSPRDVKNFIGLGVVFLRQGDYARATEAYQRVIALDP 193
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N A + ++ +T +I L+ L+ + ++L + L A L + + E +L
Sbjct: 194 NNQQAYEIMGAALVRQNKTEEAIQFLQSSLQRFSNSSELR-LQLATATLAKGDT-ETSLN 251
Query: 228 HIEHAQIVRFSGKELPLKLKV 248
++ A+ R + +++++
Sbjct: 252 LLQEAE--RLDPSNMAVQMRI 270
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G LQ GNF A ++ + L PN PE Y LG + + G++ +A Y AA LS
Sbjct: 99 GIGYLQARQGNFTAAAKAYQQALSLDPNNPELYYALGYSLANAGDYPNAAVAYYYAAKLS 158
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P+D + L +++GD A+A ++ I +P + + + V E+A +
Sbjct: 159 PRDVKNFIGLGVVFLRQGDYARATEAYQRVIALDPNNQQAYEIMGAALVRQNKTEEAIQF 218
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ + F ++ + A L G T S+ +L+E ++ PS+
Sbjct: 219 LQSSLQRFSNSSELRLQLATATLAKGDTETSLNLLQEAERLDPSN 263
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 136/316 (43%), Gaps = 16/316 (5%)
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
LG + G++ +A Y AA+L ++ ++ + ++G+ A +QA+ +P
Sbjct: 66 LGREYVDAGDYANAIAIYERAAYLDRQNPKIFSGIGYLQARQGNFTAAAKAYQQALSLDP 125
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
+ L L GDY AA +Y KL P +V +FL+ G AR+
Sbjct: 126 NNPELYYALGYSLANAGDYPNAAVAYYYAAKLSPRDVKNFIGLGVVFLRQGDYARATEAY 185
Query: 194 EEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGIC 253
+ + + P++ +++ A L+ N E+ +Q ++ + + RFS +L+++
Sbjct: 186 QRVIALDPNNQ--QAYEIMGAALVRQNKTEEAIQFLQSS-LQRFSNSS---ELRLQLATA 239
Query: 254 YLRLGNMEKAEILFADLQWKNAIDHADLITE--VADTLMSLGHSNSALKYYHFLETNAGT 311
L G+ E + L LQ +D +++ + + + L N AL+ Y + A
Sbjct: 240 TLAKGDTETSLNL---LQEAERLDPSNMAVQMRIGNILEKQQDLNGALRAYQRV---ASL 293
Query: 312 DNGYLYLKLA--ECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
+ + ++A L+ ++ A++ + A++ N DA L L + EA
Sbjct: 294 EPKSIEARMAIGRVMLAQQDYLGAVVTYKDAIELDPQNADAYYNLGVALKARGRNAEAKE 353
Query: 370 LLSPPKDLDSLDMNSD 385
L+ K + NS+
Sbjct: 354 ALNSAKQIYQSQGNSE 369
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 35/179 (19%)
Query: 29 KLSP-GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KLSP V +G + G++ +A + V+ L PN + Y +G A + A
Sbjct: 156 KLSPRDVKNFIGLGVVFLRQGDYARATEAYQRVIALDPNNQQAYEIMGAALVRQNKTEEA 215
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA------------------- 128
F + S L QL T + KGDT ++ +++A
Sbjct: 216 IQFLQSSLQRFSNSSELRLQLATATLAKGDTETSLNLLQEAERLDPSNMAVQMRIGNILE 275
Query: 129 --------IRA-------EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
+RA EPK I R+ + + DY A +Y+ +L P N DA
Sbjct: 276 KQQDLNGALRAYQRVASLEPKSIEARMAIGRVMLAQQDYLGAVVTYKDAIELDPQNADA 334
>gi|332260274|ref|XP_003279212.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Nomascus leucogenys]
Length = 823
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 34/195 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDAD 205
++ + P + +
Sbjct: 675 DTYKDTHRKFPENVE 689
>gi|328707658|ref|XP_003243459.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Acyrthosiphon pisum]
Length = 534
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G F+++I K+++ ++P+L LG+AH + ++++A + + A L P+
Sbjct: 262 ADVYYKSGKFKKSIFKYKQLLEINPHLANACYMLGMAHKNVTDYQNASNAFKNAIALEPE 321
Query: 101 DSALWKQL-LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV-EIGDYEKAAES 158
+ + ++L +T+++ Y ++ + +P+D L + LA Y+ +I +Y +AA
Sbjct: 322 NVSYLRELAVTYSILDNTRLSVKTY-KKCLNLKPEDFDLNLELALVYLNKIQNYHEAAIY 380
Query: 159 YEQIQKLFPDNVD------ATKTGAQLFLKCGQTARSIGIL 193
E+ KL PD +D T + +L S+G L
Sbjct: 381 LEKCTKLNPDRIDLYEKILTAYTKSDNYLNASDACMSMGDL 421
>gi|284123878|ref|ZP_06386955.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829235|gb|EFC33646.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
Length = 237
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+ +Y+ + +AIS E +RL + E YN G A +G + A Y A L+P
Sbjct: 55 GNAKYSIEQYPEAISDYDEAIRLGIDKAEVYNNRGYAKDEIGQYFEAISDYTEAIRLNPN 114
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+S + V G A+ +AIR +P + + + EIG Y +A Y
Sbjct: 115 NSVAYNNRGIAKVNLGHPEAAISDYDEAIRLDPNNANAYNNRGYAKDEIGQYFEAISDYT 174
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ +L P +A + G + +I +E ++++P++A
Sbjct: 175 EAIRLNPKYANAYNCRGIAKVNLGHSEAAISDFDEAIRLNPNEA 218
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 8/187 (4%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
K+N + ++N + G T Y G+++ AI + + L+PNL TY
Sbjct: 3 KINNANSNIESAQNHVDKGNT--------LYDQGDYKSAILAYDKAINLNPNLAITYFKR 54
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
G A ++ + A Y A L + ++ + G +A+ +AIR P
Sbjct: 55 GNAKYSIEQYPEAISDYDEAIRLGIDKAEVYNNRGYAKDEIGQYFEAISDYTEAIRLNPN 114
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+ + V +G E A Y++ +L P+N +A + GQ +I
Sbjct: 115 NSVAYNNRGIAKVNLGHPEAAISDYDEAIRLDPNNANAYNNRGYAKDEIGQYFEAISDYT 174
Query: 195 EYLKVHP 201
E ++++P
Sbjct: 175 EAIRLNP 181
>gi|67971760|dbj|BAE02222.1| unnamed protein product [Macaca fascicularis]
Length = 613
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 356 NPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYRYFPCNIEVIEWL 415
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 416 GAYYIDTQFWEKAIQYFEGASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 475
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 476 NVECLRFLVRLCTDLG 491
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 88/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 284 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 343
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L +GD +QA Y ++ R
Sbjct: 344 LYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYR 403
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E + P V A F + G +++
Sbjct: 404 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFEGASLIQPTQVKWQLMVASCFRRSGNYQKAL 463
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 464 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 512
>gi|37572247|gb|AAH30776.2| Intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
Length = 833
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDRGGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 696 NVECLRFLVRLCTDLG 711
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L + GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDRGGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 684 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 732
>gi|428299394|ref|YP_007137700.1| hypothetical protein Cal6303_2758 [Calothrix sp. PCC 6303]
gi|428235938|gb|AFZ01728.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 1787
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++E+A +K+ + L PN P Y G ++ ++ AF + A L P ++ L+
Sbjct: 693 DYEKAFDDIKKAIELKPNNPNYYFIRGSSYLERKENQKAFADFKKAITLQPSNAELYINR 752
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ DT +AM ++AI EPK+ I A Y E+ D E+A Y++ +L P+
Sbjct: 753 AIAYQEVKDTERAMADYKKAIELEPKNPERYITRAEAYQELKDTERAMADYKKAIELDPN 812
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
N + T A+ + + +++ ++ +++ P D
Sbjct: 813 NPERYITRARAYQDLEENEKAMADYKKAIQIEPHD 847
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 64/129 (49%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
G + L +++ AFD A L P + + + +++ + +A ++AI +P
Sbjct: 685 GAIYWKLKDYEKAFDDIKKAIELKPNNPNYYFIRGSSYLERKENQKAFADFKKAITLQPS 744
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+ L I+ A Y E+ D E+A Y++ +L P N + T A+ + + T R++ +
Sbjct: 745 NAELYINRAIAYQEVKDTERAMADYKKAIELEPKNPERYITRAEAYQELKDTERAMADYK 804
Query: 195 EYLKVHPSD 203
+ +++ P++
Sbjct: 805 KAIELDPNN 813
>gi|167041835|gb|ABZ06576.1| putative TPR domain protein [uncultured marine microorganism
HF4000_097M14]
Length = 503
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 74/143 (51%)
Query: 60 VVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTA 119
V++++PN +N LG A LG K A D Y A ++P + L + G+
Sbjct: 69 VIQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELK 128
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
+A++ ++AI+ P + +L + E+G+ +KA Y++ ++ P++V A +
Sbjct: 129 KAIHCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIV 188
Query: 180 FLKCGQTARSIGILEEYLKVHPS 202
F + G+ ++I ++ ++++P+
Sbjct: 189 FKELGELKKAIHCYQKAIQINPN 211
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 79/158 (50%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI ++ ++++PN + LG+A LG K A Y A ++P +
Sbjct: 91 GEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELKKAIHCYQKAIQINPNYANAHYN 150
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + G+ +A++ ++AI+ P ++ +L + E+G+ +KA Y++ ++ P
Sbjct: 151 LGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQKAIQINP 210
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++V A +F + ++IG ++ +++ + +D
Sbjct: 211 NHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSD 248
>gi|343958710|dbj|BAK63210.1| intraflagellar transport 88 homolog [Pan troglodytes]
Length = 824
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 97/248 (39%), Gaps = 43/248 (17%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
++ SP + + + +A G++E+A KE +R + E +GL + L A
Sbjct: 480 DRYSPAA--LTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 88 FD---------------FYVIA-------------------AHLSPKDSALWKQLLTFAV 113
D Y IA + P D + +L
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYD 597
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
++GD +QA Y ++ R P +I + L ++Y++ +EKA + +E+ + P V
Sbjct: 598 REGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQ 657
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQH 228
A F + G +++ ++ + P + + + LV + L + Y + L+
Sbjct: 658 LMVASCFRRSGNYQKALDTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKR 715
Query: 229 IEHAQIVR 236
+E + +R
Sbjct: 716 LEKMKEIR 723
>gi|269861117|ref|XP_002650273.1| hypothetical protein EBI_25271 [Enterocytozoon bieneusi H348]
gi|220066287|gb|EED43775.1| hypothetical protein EBI_25271 [Enterocytozoon bieneusi H348]
Length = 779
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 12 KTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETY 71
K ++ N + ++ K + + EAS+ Y GN QA+S+L++ V+L PN + Y
Sbjct: 12 KIKRFNINKPIKRSVNKKAKLMAKQFIKEASILYTTGNNSQALSVLEQAVKLVPNDYQAY 71
Query: 72 NTLGLAHSALGNHKSAFDFYVIAAHLSPK---DSALWKQLLTFAVQKGDTAQAMYYIRQA 128
+ L H GN + + + Y ++A LS K + +WK++ A + D + + I +
Sbjct: 72 HLAALIHEDNGNIEKSLNGYFLSAMLSNKTQINKYIWKKVYELADKCSDNKKLITAIDRM 131
Query: 129 IRAEP 133
R P
Sbjct: 132 YRKNP 136
>gi|294784207|ref|ZP_06749502.1| O-linked GLCNAC transferase [Fusobacterium sp. 3_1_27]
gi|294488073|gb|EFG35424.1| O-linked GLCNAC transferase [Fusobacterium sp. 3_1_27]
Length = 800
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 136/334 (40%), Gaps = 32/334 (9%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
YG++ +A LLK ++ S + Y+ LG + G + A + Y A L+ D+ ++
Sbjct: 160 YGHYTEAEELLKNMINKSKDDEWLYSELGYCLAEQGRQEEALESYFKAIELNRNDAWIFT 219
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
++ +A+ Y +A+ + DI + LA Y +G++EKA + E++++L
Sbjct: 220 RIGMCYKNMDKKEEAIEYYLKALELKEDDIFIMSDLAWLYDSLGEFEKALKYLERLEELG 279
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-NAYEKT 225
++ K + +I + L+ D D + I + + Y++
Sbjct: 280 ENDAWTNTEYGYCLSKLKRFDEAIVKINRALEAEDDDKDTAYIYSQLGWCKRHLEKYDEA 339
Query: 226 LQHIEHAQIVRFSGKELPLKL---------KVKAGICYLRLGNMEKAEI-LFADLQW--- 272
++ A+ + + ++L + KA YL+ +K +I L +D+ W
Sbjct: 340 IKAFSQAKKWGRNDAWINIELGHCYKAKDERQKALDFYLKAEKFDKNDIYLLSDIAWHYD 399
Query: 273 ------------KNAI----DHADLITEVADTLMSLGHSNSALKYYHFLET--NAGTDNG 314
K A+ D A + E L LG A+K Y + G D
Sbjct: 400 AMDKNQEALKYIKRAVKLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALNLDEEGKDER 459
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNI 348
Y+ +L CY L E AI + KA + D+I
Sbjct: 460 YINSQLGWCYRQLGEYKKAIKYHKKAKELGRDDI 493
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 132/368 (35%), Gaps = 70/368 (19%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI + + N LG + A + A DFY+ A D L +
Sbjct: 336 YDEAIKAFSQAKKWGRNDAWINIELGHCYKAKDERQKALDFYLKAEKFDKNDIYLLSDIA 395
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+A+ YI++A++ D + + +G Y++A + YE L +
Sbjct: 396 WHYDAMDKNQEALKYIKRAVKLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALNLDEEG 455
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
D +QL G R +G ++ +K H +L D+ +
Sbjct: 456 KDERYINSQL----GWCYRQLGEYKKAIKYHKKAKELGRDDIWI---------------- 495
Query: 230 EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA--EILFADLQWKNAIDHADLITEVAD 287
V+ G+CY +L EKA L A +D D++
Sbjct: 496 -----------------NVEIGMCYAKLEEYEKAIENYLVA-----YEMDRDDIL----- 528
Query: 288 TLMSLGHSNSALKYY----HFL--ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
TL LG A++ Y FL G D+ +L ++ + I K+L
Sbjct: 529 TLTELGWVYDAMEKYDDAIEFLLKAEKLGRDDEWLNTEIGLNLGRSGKTQEGIERLQKSL 588
Query: 342 DRFEDN-------IDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNE 394
ED+ I++ + LEE EEA+ L+ K+L D WLN
Sbjct: 589 TMVEDDDTEQKIFINSEIGWLYGRLEEPNPEEALKYLNVAKELGRDDE--------WLNS 640
Query: 395 KIIMKLCH 402
++ +L +
Sbjct: 641 ELGFELGY 648
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 38/324 (11%)
Query: 45 YAYGNFEQAISLLKEVVRLSPN-------LPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
Y +F+ A L + +L P L ETY +L GNH+ A ++ + A
Sbjct: 80 YFLDDFKNAEKYLLKANKLYPEDNFTCTLLIETYISLSRVEDENGNHEKAMEYALEAKKY 139
Query: 98 SPKD--SALWKQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
D A L + + G +A ++ I D L L E G E+
Sbjct: 140 VRDDEGEANADSFLAWLYDRYGHYTEAEELLKNMINKSKDDEWLYSELGYCLAEQGRQEE 199
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE----YLK-VHPSDADLSVI 209
A ESY + ++ + A +F + G +++ EE YLK + + D+ ++
Sbjct: 200 ALESYFKA-------IELNRNDAWIFTRIGMCYKNMDKKEEAIEYYLKALELKEDDIFIM 252
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFAD 269
L + +EK L+++E + + E + G C +L ++A +
Sbjct: 253 SDLAWLYDSLGEFEKALKYLERLEEL----GENDAWTNTEYGYCLSKLKRFDEAIVKI-- 306
Query: 270 LQWKNAIDHADLITEVADTLMSLGHSNSALKYYH-----FLETNA-GTDNGYLYLKLAEC 323
A++ D + A LG L+ Y F + G ++ ++ ++L C
Sbjct: 307 ---NRALEAEDDDKDTAYIYSQLGWCKRHLEKYDEAIKAFSQAKKWGRNDAWINIELGHC 363
Query: 324 YLSLKERAHAIMFFYKALDRFEDN 347
Y + ER A+ F+ KA ++F+ N
Sbjct: 364 YKAKDERQKALDFYLKA-EKFDKN 386
>gi|157927998|gb|ABW03295.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic
construct]
gi|157928711|gb|ABW03641.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic
construct]
Length = 824
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDRGGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 687 NVECLRFLVRLCTDLG 702
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L + GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDRGGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|444314409|ref|XP_004177862.1| hypothetical protein TBLA_0A05500 [Tetrapisispora blattae CBS 6284]
gi|387510901|emb|CCH58343.1| hypothetical protein TBLA_0A05500 [Tetrapisispora blattae CBS 6284]
Length = 1097
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 71/163 (43%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+ P V + EA+ + + A L E+++ Y TLG + +
Sbjct: 143 VDPEVALLASEANEAFVRNDLVVAERLFNEIIKKDARNFAAYETLGDIYQLQNRMNDCCN 202
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
+ +AAHL+ D + WK + +V+ QA+Y + I +D+ + Y +I
Sbjct: 203 SWFLAAHLNSSDWSFWKMVANLSVELNHIRQAIYCYSRVININHQDLESLYKRSVLYRQI 262
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
G +A E ++++ K P + + + A L++ + +IG+
Sbjct: 263 GQIGRALEGFQKLHKYNPLDNNILRELAVLYVDYNRIGNAIGL 305
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEIL--FADLQWKNAIDHADLITEVADTLMSLGHSNSAL 299
LP+ ++++ G+ LRL N + E L F L +N ++ +DL EV L + + A+
Sbjct: 490 LPIDIRIRLGL--LRLNNDQLLEALNHFHFLYDENFLEISDLYFEVGQALQNSENYEEAV 547
Query: 300 KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASL 357
Y+ L + L+ L +CY L+ + A +F K ++ +ID LTLA L
Sbjct: 548 DYFLPLLALEDFNKTELFRPLGKCYKELENYSMAKEYFEKLVEVNPTDIDDVLTLAEL 605
>gi|431908427|gb|ELK12024.1| Transmembrane and TPR repeat-containing protein 1 [Pteropus alecto]
Length = 862
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 545 EEAIALLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEMYQAGIKNCPDSSDLHNNYGV 604
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +GD A E Y++ ++
Sbjct: 605 FLVDTGFPEKAVAHYQQAIKLSPNHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKAE 664
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I E + + PS DL + + ++A++ + EK HI
Sbjct: 665 ILSPLGA-LYYNTGRYEEALQIYREAVALQPSQRDLRLALAQVLAVMGQTKEAEKMTNHI 723
>gi|77021665|gb|ABA60691.1| polaris [Danio rerio]
Length = 824
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L ++ ++P + LG + G+ AF +Y + P + ++ + L +
Sbjct: 571 QAIEWLMQLTSVTPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS Y G+Y KA E+Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYLKALETYKEIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDMG 703
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 42/238 (17%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +P ++ + + + ++E+A KE +R + E LGL + LG +
Sbjct: 479 SADRYNPAA--LINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLE 536
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A D ++ + + + QL D QA+ ++ Q P D + L
Sbjct: 537 EALDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDL 596
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y GD +A + Y + + FP N+
Sbjct: 597 YDNEGDKSQAFQYYYESYRYFPSNI----------------------------------- 621
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
SVI+ L A ++ EK +Q+ E A +++ + +K ++ CY R GN KA
Sbjct: 622 -SVIEWLGAYYIDTQFCEKAIQYFERATLIQPT----QVKWQLMVASCYRRSGNYLKA 674
>gi|397526289|ref|XP_003833065.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Pan paniscus]
Length = 833
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 576 NPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL 635
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 636 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 695
Query: 169 NVDATKTGAQLFLKCG 184
NV+ + +L G
Sbjct: 696 NVECLRFLVRLCTDLG 711
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 504 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNQLDEALDCFLKLHAILRNSAEV 563
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L ++GD +QA Y ++ R
Sbjct: 564 LYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYR 623
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 624 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 683
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P + + + LV + L + Y + L+ +E + +R
Sbjct: 684 DTYKDTHRKFPENVE--CLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 732
>gi|336371298|gb|EGN99637.1| hypothetical protein SERLA73DRAFT_159861 [Serpula lacrymans var.
lacrymans S7.3]
Length = 938
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
G + + ++GE + Y + +AI +++EV+R+ P ++ L +
Sbjct: 26 GIGKRKKKALRSLIGEGNQAYVDSDLPEAIRIMQEVIRIEPRAASAWSVLAQCYEDTDEP 85
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
+ A ++AAHL D+ W +L + G QA+Y R+ R +P ++ A
Sbjct: 86 QKALQLRIMAAHLR-HDAEEWDRLARHSKDLGYNQQALYCYRKLYRLDPSNVDALWDRAC 144
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNV 170
++G+ A S I K FP ++
Sbjct: 145 LAKDMGELRTARHSLVAILKRFPHDL 170
>gi|220915045|ref|YP_002490353.1| hypothetical protein [Methylobacterium nodulans ORS 2060]
gi|219952796|gb|ACL63186.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 392
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 1/175 (0%)
Query: 29 KLSPGVT-KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
++ PG+ LG S+ + ++QA++ + +R+ P YN G + + G + A
Sbjct: 54 RIEPGLALAYLGRGSVYESRREYDQAMADYNKAIRIDPKYAIAYNYRGNVYVSKGEYDRA 113
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y +A + P+ + + K + +A+ +AIR P+ +S + Y
Sbjct: 114 IADYSMAIRIDPEYTDAYDNRGYIYQNKHEYDRAIADYNEAIRINPELVSAYFNRGLIYY 173
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+G+Y+ A Y ++ P++ A + G+ R+I +E +++ PS
Sbjct: 174 NMGNYDLAIADYGNAIRIEPNHKSAYNNRGLAYFGKGEYDRAISDYDEAIRIDPS 228
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI+ E +R++P L Y GL + +GN+ A Y A + P + +
Sbjct: 144 YDRAIADYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRG 203
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
KG+ +A+ +AIR +P S I+ A+ IGD +KA Y+ +
Sbjct: 204 LAYFGKGEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNV 256
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 2/158 (1%)
Query: 47 YGN--FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
YGN +EQAI+ E +R+ P L Y G + + + A Y A + PK +
Sbjct: 37 YGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQAMADYNKAIRIDPKYAIA 96
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ V KG+ +A+ AIR +P+ + Y +Y++A Y + +
Sbjct: 97 YNYRGNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHEYDRAIADYNEAIR 156
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ P+ V A ++ G +I +++ P+
Sbjct: 157 INPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPN 194
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 34/202 (16%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V+ + Y GN++ AI+ +R+ PN YN GLA+ G + A Y
Sbjct: 162 VSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRGLAYFGKGEYDRAISDYDE 221
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMY---------------YIRQ----------- 127
A + P ++ + GD +A+ YI +
Sbjct: 222 AIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNVILLDLNHEIAYINRALIYQNKNNYD 281
Query: 128 --------AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
AIR +PK + Y + +Y++AA Y + ++ P A
Sbjct: 282 LAITDCNNAIRIKPKHANSYFIRGGIYYDKTEYDRAAVDYSEAIRIDPKYALAYFNRGLA 341
Query: 180 FLKCGQTARSIGILEEYLKVHP 201
+L + RS+ E +++ P
Sbjct: 342 YLNKNEPRRSLTDFAEAVRLKP 363
>gi|157821925|ref|NP_001100736.1| intraflagellar transport protein 88 homolog [Rattus norvegicus]
gi|149064079|gb|EDM14349.1| intraflagellar transport 88 homolog (Chlamydomonas) (predicted)
[Rattus norvegicus]
Length = 815
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 39/248 (15%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +P + + + + +A G++E+A KE +R + E +GL + L
Sbjct: 479 SSDRYNP--SALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLD 536
Query: 86 SAFDFYV---------------IA-------------------AHLSPKDSALWKQLLTF 111
A D ++ IA + P DS +L
Sbjct: 537 EALDSFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGEL 596
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+GD +QA Y ++ R P +I + L ++Y++ EKA + +E+ + P V
Sbjct: 597 YDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVK 656
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL--SVIDLLVAI-LMENNAYEKTLQH 228
A F + G +++ +E + P + + ++ L I L E Y L+
Sbjct: 657 WQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKR 716
Query: 229 IEHAQIVR 236
+E + +R
Sbjct: 717 LEKMKEMR 724
>gi|91204151|emb|CAJ71804.1| conserved hypothetical tpr repeat protein [Candidatus Kuenenia
stuttgartiensis]
Length = 817
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+ +++ + ++++P+ T+N+LG +G+ A + Y A L P D+ + L
Sbjct: 536 NYRESVDAFLKALKIAPDKSSTHNSLGNVLKEMGDFDGAEEAYKTALQLDPADANIHNSL 595
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+AM AIR +PK S +L Y GD EKAAE+ L D
Sbjct: 596 GMLYTNMKQFDKAMREFDTAIRLDPKMASAYNNLGIAYANKGDGEKAAEALNTAVALGFD 655
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
D A +++ G T +I L+ L+ +D + +L +A L + N +K +
Sbjct: 656 GADVHNNLACVYMTMGMTDNAIRELDIVLEYDQTDCNAHC-NLGIAYLSKKNV-DKAISE 713
Query: 229 IEHA 232
E A
Sbjct: 714 FEEA 717
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 142/326 (43%), Gaps = 18/326 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHS---ALGNHKSAFDFYVIAAHLSPKDSAL 104
G +E+A K+ + + PN Y LG + +G+ +A++ A +P +
Sbjct: 433 GMYEKAEYEYKKTLEIKPNDAGAYYNLGNLYERKELIGDAIAAYE---KAIQSNPYHADA 489
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + +K A+ +AIR P D +L Y+E +Y ++ +++ + K
Sbjct: 490 YNNIGNIYKKKKQYPAAVKMYEKAIRCNPFDFRYHSNLGLIYLETKNYRESVDAFLKALK 549
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
+ PD + + + G + + L++ P+DA++ + L + ++K
Sbjct: 550 IAPDKSSTHNSLGNVLKEMGDFDGAEEAYKTALQLDPADANIH--NSLGMLYTNMKQFDK 607
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEK-AEILFADLQWKNAIDHADLIT 283
++ + A +R K + GI Y G+ EK AE L + D AD+
Sbjct: 608 AMREFDTA--IRLDPKMASAYNNL--GIAYANKGDGEKAAEALNTAVAL--GFDGADVHN 661
Query: 284 EVADTLMSLGHSNSALKYYHFLETNAGTD-NGYLYLKLAECYLSLKERAHAIMFFYKALD 342
+A M++G +++A++ + TD N + L +A YLS K AI F +A+
Sbjct: 662 NLACVYMTMGMTDNAIRELDIVLEYDQTDCNAHCNLGIA--YLSKKNVDKAISEFEEAIK 719
Query: 343 RFEDNIDARLTLASLLLEEAKEEEAI 368
D+ D L + L+E+ + EA+
Sbjct: 720 INADDADFHHYLGNALMEKGRYGEAV 745
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 97/222 (43%), Gaps = 9/222 (4%)
Query: 42 SLQYAYGN---FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
SL Y N F++A+ +RL P + YN LG+A++ G+ + A + A L
Sbjct: 594 SLGMLYTNMKQFDKAMREFDTAIRLDPKMASAYNNLGIAYANKGDGEKAAEALNTAVALG 653
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
+ + L + G T A+ + + + D + +L Y+ + +KA
Sbjct: 654 FDGADVHNNLACVYMTMGMTDNAIRELDIVLEYDQTDCNAHCNLGIAYLSKKNVDKAISE 713
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-SVIDLLVAILM 217
+E+ K+ D+ D ++ G+ ++ ++++P ++ + + ++ A
Sbjct: 714 FEEAIKINADDADFHHYLGNALMEKGRYGEAVDAFARAIEINPENSSVHKALGVVYANYF 773
Query: 218 ENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGN 259
N K L H++ + +R + + P+ +++A I L G+
Sbjct: 774 NNT--RKALFHLK--ETLRLNPNQ-PMAGEIEAAIVTLSGGS 810
>gi|337288886|ref|YP_004628358.1| hypothetical protein TOPB45_1349 [Thermodesulfobacterium sp. OPB45]
gi|334902624|gb|AEH23430.1| Tetratricopeptide TPR_2 repeat-containing protein
[Thermodesulfobacterium geofontis OPF15]
Length = 528
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
A Q+ D + A Y+++AI+ +P+ + L+ L S Y+E GD +KA +++ + +P +
Sbjct: 44 LATQERDPSVAEKYLKKAIKYDPQSLYLKKTLISLYLENGDLKKAESLCKKLLENYPKDR 103
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE 230
+ A++++ + R+I ILE+YL+ P D ++ LLV + ++ ++ L ++E
Sbjct: 104 EINLFLAKIYILENRPLRAISILEKYLEYFPKDE--IILSLLVNLYLDQKDWDSALINLE 161
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL-GNHKSAFDFYVIAAHLSPKDSALWKQ 107
N+E+ +SL++ +++ P P N +G ++ L N A + A ++P D +
Sbjct: 389 NYEKVLSLIEPLLKKYPQDPFVLNFVGYSYVELEKNLDEAERLLLKALQINPLDPYILDS 448
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI-HLASFYVEIGDYEKAAESYEQ 161
L +KGD A+ Y+ +A++ P+D ++ I HL Y++ GD EKA E Y++
Sbjct: 449 LGWCYYKKGDLDLAIQYLEKAVKRLPEDEAVIIEHLGDAYLKRGDKEKACELYQR 503
>gi|332708793|ref|ZP_08428764.1| hypothetical protein LYNGBM3L_32380 [Moorea producens 3L]
gi|332352335|gb|EGJ31904.1| hypothetical protein LYNGBM3L_32380 [Moorea producens 3L]
Length = 421
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 65/127 (51%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +A+ ++ + P + Y G+ H LG+++ A A L+P+D+ +
Sbjct: 180 GKYREALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNPQDAQVRYH 239
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ GD A+ + + +++ P++ + IH + Y+++GDY +A E Y ++ L P
Sbjct: 240 RGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDYSRVITLKP 299
Query: 168 DNVDATK 174
++ + +
Sbjct: 300 NDAQSYR 306
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
G ++ A + + + PK++ + + GD +A+ + QA+ P+D +R H
Sbjct: 180 GKYREALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNPQDAQVRYH 239
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+E+GDY A + ++ + P+N D +++ G ++I + + P
Sbjct: 240 RGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDYSRVITLKP 299
Query: 202 SDA 204
+DA
Sbjct: 300 NDA 302
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ +AI L + + L+P + GL LG+++ A D +P++ +
Sbjct: 214 GDYRRAIQDLGQAMELNPQDAQVRYHRGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIH 273
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+Q GD QA+ + I +P D + A+ + D A E Y+Q L+
Sbjct: 274 RGNAYIQMGDYRQAIEDYSRVITLKPNDAQSYRYRATAREKFEDLRGAFEDYQQAANLYF 333
Query: 168 DNVDAT 173
D D T
Sbjct: 334 DQQDWT 339
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-- 105
G+ +AI + + ++PN E Y +A LG+ + A Y A ++ + ++
Sbjct: 16 GDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQALQINSESIEVYFG 75
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ L A+ GD A+ Q ++ P + S Y ++GD + A S++Q +L
Sbjct: 76 RGLARLAL--GDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQAAIASFKQAAQL 133
Query: 166 FPDNVD 171
+ D D
Sbjct: 134 YLDQQD 139
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 10/187 (5%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
S + G + A G+ AI ++++++PN P G A+ LG++++A
Sbjct: 67 SESIEVYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQAAIAS 126
Query: 91 YVIAA--HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+ AA +L +D ++ L ++ + Q + RA+ D H A V
Sbjct: 127 FKQAAQLYLDQQDKLNCRRCLE-SINQIQQQQIL----ALGRAQTNDF---CHQAINKVN 178
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
G Y +A E + + ++ P N A + K G R+I L + ++++P DA +
Sbjct: 179 TGKYREALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNPQDAQVRY 238
Query: 209 IDLLVAI 215
LV I
Sbjct: 239 HRGLVRI 245
>gi|154249690|ref|YP_001410515.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1]
gi|154153626|gb|ABS60858.1| Tetratricopeptide TPR_2 repeat protein [Fervidobacterium nodosum
Rt17-B1]
Length = 359
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
SL G+ E AI L + L P L ++Y+ +G A+ +GN++ A +++ +SP
Sbjct: 139 GSLLLEEGDIEGAIKYLNRSIELDPWLIQSYSMIGEAYYNIGNYEKAVEYWEKEIAISPS 198
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
++ + + + G +A+ + + I LA Y + G+ EKA E
Sbjct: 199 NTFTYFMISDAYTKIGKLEKAIEILEKYREESENSIIALYELAELYRKKGNEEKAKEYES 258
Query: 161 QIQKLFPD-NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN 219
I ++ P + + + A++ LK G + I ++E +K +P L+++ L ++
Sbjct: 259 LIMEIDPQKDPNGIEIWAKVHLKKGNYDKVISVIENAIKANPEAKHLNLV--LAVAYVKT 316
Query: 220 NAYEKTLQHIEH 231
N EK + +E
Sbjct: 317 NQIEKARRVVEE 328
>gi|383318796|ref|YP_005379637.1| Serine/threonine protein kinase [Methanocella conradii HZ254]
gi|379320166|gb|AFC99118.1| Serine/threonine protein kinase [Methanocella conradii HZ254]
Length = 617
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G + AI +E +RL+P L + +N LG A A G A Y+ A L P DSA+
Sbjct: 392 ARGQVDMAIDEYREALRLNPCLADAHNNLGTALRAKGLLDEAMREYLHALRLKP-DSAMA 450
Query: 106 KQLLTFAVQ-KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L + +G+ +A+ ++AIR +P + R++L G +KA + Y + +
Sbjct: 451 RHNLGLSYACRGELDRAIREYKEAIRLKPGLVEARVNLGLALAMKGRLDKAIDEYRKAAR 510
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+ PD+ A + R++G +EE
Sbjct: 511 MRPDD-------AIIHFNLANALRAVGRIEE 534
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE--------TYNTLGLAHSA 80
++ PG+ + Y G ++AI + ++ +R P L E +N LG+A+ A
Sbjct: 333 RVEPGIWEYNNRGLALYNVGLVDEAIWVYRKALRADPVLAEQHKARLATVHNNLGVAYDA 392
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
G A D Y A L+P + L T KG +AM A+R +P R
Sbjct: 393 RGQVDMAIDEYREALRLNPCLADAHNNLGTALRAKGLLDEAMREYLHALRLKPDSAMARH 452
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDA-TKTGAQLFLKCGQTARSIGILEEYLKV 199
+L Y G+ ++A Y++ +L P V+A G L +K G+ ++I + ++
Sbjct: 453 NLGLSYACRGELDRAIREYKEAIRLKPGLVEARVNLGLALAMK-GRLDKAIDEYRKAARM 511
Query: 200 HPSDA 204
P DA
Sbjct: 512 RPDDA 516
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Query: 42 SLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
L YA G ++AI KE +RL P L E LGLA + G A D Y AA + P
Sbjct: 455 GLSYACRGELDRAIREYKEAIRLKPGLVEARVNLGLALAMKGRLDKAIDEYRKAARMRPD 514
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D+ + L G +A+ ++ EP + R L + G + A Y
Sbjct: 515 DAIIHFNLANALRAVGRIEEAILEYSASLWIEPGNAEARHRLGLSLEDAGRLQDAISEYV 574
Query: 161 QIQKLFP 167
+L P
Sbjct: 575 GALRLEP 581
>gi|291570823|dbj|BAI93095.1| serine/threonine protein kinase containing TPR domain [Arthrospira
platensis NIES-39]
Length = 759
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+ + +L Y G ++A+ ++ + + PN ++ G+A L + A + + A
Sbjct: 420 LTSKGTLLYQMGEPQKALDTHEQAIAIDPNYARAWHGKGIALIGLQRYDEAVEAFDQAKT 479
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA-------IRAEPKDISLRIHLASFYVEI 149
L P ++W+ +G A+A +A +R +P+ + + S ++
Sbjct: 480 LRPSAPSVWQSKAIALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL 539
Query: 150 GDYEKAAESYEQIQKLFPDNVDA-TKTGAQLFLKCGQTARSIGILEEYLKVHP 201
G +E+A ESYE+ ++ PD+ A + G LF G+T ++ I + ++V P
Sbjct: 540 GRHEQALESYEKALEINPDHFQALLQKGNVLFSPLGRTEEAVTISDRAIEVQP 592
>gi|425458614|ref|ZP_18838102.1| Periplasmic protein [Microcystis aeruginosa PCC 9808]
gi|389826319|emb|CCI23269.1| Periplasmic protein [Microcystis aeruginosa PCC 9808]
Length = 363
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ ++ L N + ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVKNGNYGEAIAVYEQAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYDNAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ I L P+N A + + ++ +++ + L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWILALDPNNQQAHEIMGKALIEQNKSSEAFDFLQKSLQRFPNNSE 211
>gi|156848137|ref|XP_001646951.1| hypothetical protein Kpol_2000p60 [Vanderwaltozyma polyspora DSM
70294]
gi|156117633|gb|EDO19093.1| hypothetical protein Kpol_2000p60 [Vanderwaltozyma polyspora DSM
70294]
Length = 1033
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+ P V +++ EA+ + + A L E+++ P Y TLG + G +
Sbjct: 113 IDPEVAQLISEANEAFVRNDLVVAERLFNEIIKKDPRNFAAYETLGDIYQIQGRLNDCCN 172
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
+ IAAHL+ D W+ + + G QA+Y + I D A Y +I
Sbjct: 173 SWFIAAHLNSSDWEFWRVVAALSADLGHARQAIYCYSRVINIHHDDTEAVYRRAVLYKDI 232
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
G +A E ++++ P + + + A L+++ + +I +
Sbjct: 233 GQIGRALEGFQKLYVHNPYDPNILRELAVLYVEYNRINEAIDL 275
>gi|452821408|gb|EME28439.1| hypothetical protein Gasu_41290 [Galdieria sulphuraria]
Length = 677
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
K SP K L + +++ G E LLK V PN + + LG H A ++SA
Sbjct: 271 KESPNHAKSLQQLGWIEHEEGRSEDGFQLLKRAVEADPNDGQGWYLLGRLHMAKKEYRSA 330
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+D Y A + + ++ W + Q G AM +AIR P + L + Y
Sbjct: 331 YDNYQHAVYCNSRNPRFWCSIGVLYYQMGQHRDAMDAYTRAIRLNPNLSEVWYDLGTLYE 390
Query: 148 EIGDYEKAAESYEQIQKLFPDN 169
Y+ A ++Y++ +L P+N
Sbjct: 391 SFSQYKDALDAYKKALELSPNN 412
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L Y G A+ +RL+PNL E + LG + + +K A D Y A LSP +S
Sbjct: 354 LYYQMGQHRDAMDAYTRAIRLNPNLSEVWYDLGTLYESFSQYKDALDAYKKALELSPNNS 413
Query: 103 AL 104
+
Sbjct: 414 QI 415
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
A SLL+ RL+ + +G ++G+ A + Y A S +L +
Sbjct: 49 ARSLLQ---RLTMGNESVWIRIGTLRESIGDTTGAMEAYNNALRFSSNTPTPLCKLGSIL 105
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
++KG QA+ YI+QA+ L +Y++ G YE+A E+++ +L D A
Sbjct: 106 LRKGQLEQALIYIQQALALSGNSGEAWSLLGYYYLKTGAYEQAYEAFQSAIRLLGDQASA 165
>gi|15126637|gb|AAH12250.1| Intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 824
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 68/133 (51%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 570 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 629
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 630 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 689
Query: 172 ATKTGAQLFLKCG 184
+ +L + G
Sbjct: 690 CLRFLVRLCTEIG 702
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 88/229 (38%), Gaps = 37/229 (16%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV------------ 92
+A G++E+A KE +R + E +GL + L A D ++
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSFLKLHAILRNSAQV 554
Query: 93 ---IA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
IA + P DS +L +GD +QA Y ++ R
Sbjct: 555 LCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADL--SVIDLLVAI-LMENNAYEKTLQHIEHAQIVR 236
+E + P + + ++ L I L E Y L+ +E + +R
Sbjct: 675 DTYKEIHRKFPENVECLRFLVRLCTEIGLKEVQEYATKLKRLEKMKEMR 723
>gi|326914341|ref|XP_003203484.1| PREDICTED: intraflagellar transport protein 88 homolog [Meleagris
gallopavo]
Length = 818
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P P + LG + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDPHVLSKLGKLYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A P + ++ +AS Y G+Y+KA E Y+ I + FP+NV+
Sbjct: 631 CIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEKYKVIHQKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDMG 703
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 90/240 (37%), Gaps = 46/240 (19%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +P + + + +A ++E+A KE +R + E LGL + L
Sbjct: 479 SSDRYNPAA--LTNKGNTVFANEDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRTD 536
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A D ++ + + + Q+ D QA+ ++ Q I P D + L
Sbjct: 537 EALDCFLKLHAILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPTDPHVLSKLGKL 596
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y GD +A Y + + FP N++
Sbjct: 597 YDNEGDKSQAFHYYYESYRYFPSNIE---------------------------------- 622
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLK--VKAGICYLRLGNMEKA 263
VI+ L A ++ EK +++ E A ++ LP ++K + CY R GN +KA
Sbjct: 623 --VIEWLGAYCIDTQFCEKAIEYFERAALI------LPTQVKWQLMVASCYRRSGNYQKA 674
>gi|145542364|ref|XP_001456869.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424683|emb|CAK89472.1| unnamed protein product [Paramecium tetraurelia]
Length = 730
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+L GN +QA+ EV+ PN P LG + + A ++ + + P
Sbjct: 501 ATLYEMTGNSKQAMKWYLEVMNKVPNDPNILARLGSLFAREDDEPQALHYFQESYRILPT 560
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L + V++ +A Y +A + + +D+ ++ +AS Y +G ++KA +Y+
Sbjct: 561 NIETISWLGVYYVKQEMYEKASLYFERAAQVQSRDVKWKLMVASCYRRMGHFQKALGNYQ 620
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQ 185
+I +PDN++ + QL + GQ
Sbjct: 621 KIYSDYPDNIECLRFLVQLCREMGQ 645
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L+ +V +PE + + GN K A +Y+ + P D + +L +
Sbjct: 482 QALDKLQTIV----CIPEVLYQMATLYEMTGNSKQAMKWYLEVMNKVPNDPNILARLGSL 537
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
++ D QA++Y +++ R P +I L +YV+ YEKA+ +E+ ++ +V
Sbjct: 538 FAREDDEPQALHYFQESYRILPTNIETISWLGVYYVKQEMYEKASLYFERAAQVQSRDVK 597
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
A + + G +++G ++ +P ++ + LV + E
Sbjct: 598 WKLMVASCYRRMGHFQKALGNYQKIYSDYPD--NIECLRFLVQLCRE 642
>gi|282900764|ref|ZP_06308705.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
CS-505]
gi|281194348|gb|EFA69304.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
CS-505]
Length = 1024
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++PN YN GLA S LG+ + A Y A ++P ++ +
Sbjct: 410 GDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYN 469
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P I + E+GD + A Y Q ++ P
Sbjct: 470 RGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINP 529
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ DA + G +I + ++++P+DAD
Sbjct: 530 NYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDAD 567
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++PN ++Y G+A S LG+ + A Y A ++P + +
Sbjct: 818 GDKQGAIVDYNQAIQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYN 877
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P I + E+GD + A Y Q ++ P
Sbjct: 878 RGIARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINP 937
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ DA + G +I + ++++P+DAD
Sbjct: 938 NYADAYNNRGIARSELGDKQGAIVDYNQAIQINPNDAD 975
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++PN ++Y G+A S LG+ + A Y A ++P D+ +
Sbjct: 750 GDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYN 809
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P + + E+GD + A Y Q ++ P
Sbjct: 810 RGLARSELGDKQGAIVDYNQAIQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINP 869
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ D+ + G +I + ++++P+ AD
Sbjct: 870 NYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAD 907
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 133/341 (39%), Gaps = 30/341 (8%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+G + + G+ + AI + ++++PN Y G A S LG+ + A Y A +
Sbjct: 264 IGRGNARSDLGDKQGAIVDYNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQI 323
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P + + + GD A+ QAI+ P D + E+GD + A
Sbjct: 324 NPNYADAYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIV 383
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--------------- 202
Y Q ++ P+N DA + G +I + ++++P+
Sbjct: 384 DYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSEL 443
Query: 203 -DADLSVIDLLVAILME-NNAYEKTLQHIEHAQIVRFSGK----ELPLKLKVKAGICYLR 256
D +++D AI + NNAY + + +++ G +++ Y+
Sbjct: 444 GDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIG 503
Query: 257 LGNM--EKAEILFADLQWKNAI----DHADLITEVADTLMSLGHSNSAL-KYYHFLETNA 309
GN E + A + + AI ++AD + LG A+ Y ++ N
Sbjct: 504 RGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINP 563
Query: 310 GTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
+ Y LA L ++ AI+ + +A+ +N DA
Sbjct: 564 NDADAYYNRGLARS--ELGDKQGAIVDYNQAIQINPNNADA 602
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+G + + G+ + AI + ++++PN + Y G A S LG+ + A Y A +
Sbjct: 502 IGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQI 561
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P D+ + + GD A+ QAI+ P + + E+GD + A
Sbjct: 562 NPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIV 621
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y Q ++ P+ D+ + G +I + ++++P+ AD
Sbjct: 622 DYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYAD 669
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++PN YN GLA S LG+ + A Y A ++P ++ +
Sbjct: 682 GDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNN 741
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P + E+GD + A Y Q ++ P
Sbjct: 742 RGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINP 801
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ DA + G +I + ++++P++AD
Sbjct: 802 NDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNAD 839
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G+ + AI + ++++PN Y G A S LG+ + A Y A ++P +
Sbjct: 237 YESGDKQGAIVDYTQAIQINPNYALAYIGRGNARSDLGDKQGAIVDYNQAIQINPNYALA 296
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + GD A+ QAI+ P + E+GD + A Y Q +
Sbjct: 297 YYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRGIARSELGDKQGAIVDYNQAIQ 356
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ P++ DA + G +I + ++++P++AD
Sbjct: 357 INPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNAD 397
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+G + + G+ + AI + ++++PN + Y GLA S LG+ + A Y A +
Sbjct: 536 IGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQI 595
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P ++ + + GD A+ QAI+ P + E+GD + A
Sbjct: 596 NPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIV 655
Query: 158 SYEQIQKLFPDNVDA 172
Y Q ++ P+ D+
Sbjct: 656 DYTQAIQINPNYADS 670
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++PN ++Y G+A S LG+ + A Y A ++P + +
Sbjct: 852 GDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADAYIG 911
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P + E+GD + A Y Q ++ P
Sbjct: 912 RGNARSELGDKQGAIVDYNQAIQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINP 971
Query: 168 DNVDA 172
++ DA
Sbjct: 972 NDADA 976
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++PN ++Y G+A S LG+ + A Y A ++P + +
Sbjct: 648 GDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNN 707
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P + + E+GD + A Y Q ++ P
Sbjct: 708 RGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINP 767
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ D+ + G +I + ++++P+DAD
Sbjct: 768 NYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDAD 805
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++PN + Y G A S LG+ + A Y A ++P + +
Sbjct: 886 GDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNN 945
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ GD A+ QAI+ P D + E+GD + A ++ +L+
Sbjct: 946 RGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGARGDFQTAARLY 1004
>gi|367011198|ref|XP_003680100.1| hypothetical protein TDEL_0B07600 [Torulaspora delbrueckii]
gi|359747758|emb|CCE90889.1| hypothetical protein TDEL_0B07600 [Torulaspora delbrueckii]
Length = 752
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 27/240 (11%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSP--NLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
LG A G EQAIS R P +LP + LG+ + AL A +++ ++
Sbjct: 502 LGFAHTYAIEGEHEQAISAYSTAARFFPGIHLPNLF--LGMQYMALNTLSLAEEYFTLSY 559
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA----EP---KDISLRIHLASFYVE 148
+ P+D L ++ ++ D +A ++++A+ A +P +S++++LA Y
Sbjct: 560 DICPQDPLLLNEMGVMYFKRNDLQKAKKFLKRALEAVEELDPTSKTSVSIQMNLAHAYRR 619
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--- 205
+G+ E+A + ++ + K+ + D + L+LK Q ++I L + PS++
Sbjct: 620 LGENERAIKCFKSVLKVSNKSSDTYCSLGFLYLKTKQLQKAIDHFHTALALRPSNSAAQE 679
Query: 206 --LSVIDLLVAI-------LMENNAYEKT----LQHIEHAQIVRFSGKELPLKLKVKAGI 252
L ++L V++ LM N +++ Q+ + V F LP K+K+ I
Sbjct: 680 LLLHALELNVSMTLDADHPLMVNAQIQESSSNLFQNSKKRAPVAFDMVGLPKKMKIPGQI 739
>gi|406952433|gb|EKD82044.1| hypothetical protein ACD_39C01506G0001, partial [uncultured
bacterium]
Length = 994
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 143/337 (42%), Gaps = 26/337 (7%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y ++ A+ K + L + + Y LG HS++ + K A F+ A L ++ ++
Sbjct: 628 YQRDEYQDALVKFKRALELQDDYVDVYQKLGTIHSSMEHWKEAKQFFEKAIELEAENYSI 687
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+++L + GD A+ +A+ +P D+++ L + Y K ++ +
Sbjct: 688 YRELGEACEKLGDVEGAISSFEKALEFKPGDLNIIYRLGAQY-------KQNNNFNAMVV 740
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGI-------LEEYLKVHPSDADLSVIDLLVAILM 217
L+ V+A A + + G+ R +G E+ L ++ + + I L I
Sbjct: 741 LYSKAVEAAPKNALFYFELGEAYRGLGQQNEAASNFEQALTLNEN--LIECIYALGGIFW 798
Query: 218 ENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID 277
EN YEK ++ + A I R+ + + G Y RL + A F + ++ +
Sbjct: 799 ENQHYEKMVRLYKKA-INRYPTNS---RAHFELGKAYYRLLKIGDAIDEFKKVINLDS-N 853
Query: 278 HADLITEVADTLMSLGHSNSALKYYHFLETNAGT--DNGYLYLKLAECYLSLKERAHAIM 335
H ++ E+ + G + + LE +NG + L + Y L +++ A
Sbjct: 854 HQEVYFELGRLYIDNGMLSEGAE---TLEKAVAITPENGEAHFLLGKAYEGLNDKSKATQ 910
Query: 336 FFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLS 372
F KA + E+N + L + + LE EEA+ L+
Sbjct: 911 SFKKAQGQMEENYEVLLKVGADYLERESYEEALQQLT 947
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 40/294 (13%)
Query: 65 PNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYY 124
PN PE +GL H GN A + + A + + ++L + KG +A+
Sbjct: 444 PNNPEILTQIGLMHRKQGNLDMAIERFNRAIQIDGSNPLPHRELAMAYINKGRVDKAIGE 503
Query: 125 IRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCG 184
++A+ EP +I + I LA Y G + A +SY ++ L P N +A ++ G
Sbjct: 504 FKEALNYEPSNIVVNIELAKAYASQGIIDDAVDSYRKVIGLDPRNSNAHFELGIIYSTQG 563
Query: 185 QTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGK---- 240
+I + + + P + H+E + +R +G+
Sbjct: 564 LNDNAISEFKTVIGLSP---------------------DHKRAHLELGRHLRDTGRVDEA 602
Query: 241 --EL--PLKLKVKAGICYLRLGNM--EKAEILFADLQWKNAIDHADLITEVADTLMSLGH 294
EL +L + + Y LG++ ++ E A +++K A++ D + D LG
Sbjct: 603 IDELRKASQLDPENAVIYYELGDVYYQRDEYQDALVKFKRALELQD---DYVDVYQKLGT 659
Query: 295 SNSALKYY----HFLE--TNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALD 342
+S+++++ F E +N +Y +L E L + AI F KAL+
Sbjct: 660 IHSSMEHWKEAKQFFEKAIELEAENYSIYRELGEACEKLGDVEGAISSFEKALE 713
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
+ AIS K V+ LSP+ + LG G A D A+ L P+++ ++ +L
Sbjct: 566 DNAISEFKTVIGLSPDHKRAHLELGRHLRDTGRVDEAIDELRKASQLDPENAVIYYELGD 625
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
Q+ + A+ ++A+ + + + L + + + +++A + +E+ +L +N
Sbjct: 626 VYYQRDEYQDALVKFKRALELQDDYVDVYQKLGTIHSSMEHWKEAKQFFEKAIELEAENY 685
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAY 222
+ + K G +I E+ L+ P DL++I L A +NN +
Sbjct: 686 SIYRELGEACEKLGDVEGAISSFEKALEFKP--GDLNIIYRLGAQYKQNNNF 735
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 149/391 (38%), Gaps = 106/391 (27%)
Query: 57 LKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-------------DSA 103
L + L+P + + LGL H G ++ A D + A LSPK DS
Sbjct: 62 LTRTIELAPAHDQAHYYLGLLHHRNGRYQQAIDEFNSAIALSPKPSRIQFDLAMLYADSG 121
Query: 104 LWKQLLTF--------------AVQKGDTAQAMYYIRQ-------AIRAEPKDISLRIHL 142
W++ T +Q T + + +++ AI +P+ + +L
Sbjct: 122 NWQEAKTILEKVLEHEHDFIDAIIQYAITLEHLEMLKEAEEEYLRAIELQPEGLRAHENL 181
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A Y KA + + ++ ++ P++V A + A++++ +++ L + + P
Sbjct: 182 ARLYESTNQIYKAEDEFRKVVEIKPNHVAAQMSLAKIYIIRDLHDKALNALHTVVDIEPE 241
Query: 203 --DADLSVIDLLVAILMENNAYEKTLQ---------------HIEHAQIVRFSGK----- 240
+A L L I +NA EK+++ H+E A++ K
Sbjct: 242 IFEAHLE----LGRIYHHHNALEKSVESYKSAIRIRAEAPQAHVELAEVYLAMEKSARAI 297
Query: 241 -ELPLKLKVK----------------------AGICYLRLGNMEK---------AEILFA 268
E L L++ AG CY RL M+ AE +
Sbjct: 298 EEYKLALEIDPSLAEALANLGDLYNMSEQYELAGNCYRRLVEMDPQNHSARFRLAETCYH 357
Query: 269 DLQWKNAIDH----ADLITEVADTLMSLGHSNSAL-------KYY-HFLETNAGTDNGYL 316
Q + A+D A++ E D L+ LG ++L KYY ET+ N +
Sbjct: 358 CGQLEKALDEYLKVAEINEERTDALIRLGKIYASLEKWEDAAKYYVRVFETD--PQNSLI 415
Query: 317 YLKLAECYLSLKERAHAIMFFYKALDRFEDN 347
+L+L + Y L A+ F AL+R +N
Sbjct: 416 HLELGKVYDHLNRLTDALREFEAALEREPNN 446
>gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 658
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F Q+I K+ ++++P P+ YN LG ++ G + +I L+P D + L
Sbjct: 335 FSQSILYFKKCIQINPKDPDYYNGLGNSYRLNGQLDDSIQTILICVKLNPNDDSYHYNLG 394
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
QKG +A Y +++ PKD H E+ +KA ++ Q + P N
Sbjct: 395 LAYYQKGCFLEASQYFSKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKN 454
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ Q + + SI + L+++P+++
Sbjct: 455 ENTYYNLGQAYYDQNKIEESIQCFKICLEINPNNS 489
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A++ Y G ++AIS+ K+ + ++P TY LGL + G + A + ++ +
Sbjct: 190 ANIYYKIGKVDEAISIFKQCIEVNPKHENTYINLGLTYKRKGMSEEALILFKRCLEINSR 249
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + +G +A+ +++ P LAS Y E G E A E+Y+
Sbjct: 250 NEVAHYNIGLEYIHQGRVDEAILVFLKSLDLNPSYEECLNSLASAYEEKGMMEDAIETYQ 309
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ +L +N A ++ + Q ++SI ++ ++++P D D
Sbjct: 310 KCLQLNQNNEIALYNLGLIYKQQCQFSQSILYFKKCIQINPKDPD 354
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++ I+ K+ + ++P+ T N LG + GN + + Y + ++P++
Sbjct: 503 GQLDEGIACFKKSLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCLEINPRNDICHCN 562
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L QKG A+ ++++ PK+ +L + E G ++ A SY Q +L P
Sbjct: 563 LGIAYFQKGIIEGAIQSYKKSLEINPKNEYSLYYLGLAFYEKGKFDDAILSYRQCLELNP 622
Query: 168 -DNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
+N+ G + + + G ++I +++L+ +
Sbjct: 623 QENLQNQFIGHE-YREIGNLDQAIQSYKQFLQTN 655
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G F++AIS + ++L PN Y LG +G + A Y ++PK +
Sbjct: 129 GKFQEAISSYNKAIQLKPNYEMCYEALGNLQQDMGLIQEAIFSYNKILEVNPKYENGYNC 188
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + G +A+ +Q I PK + I+L Y G E+A +++ ++
Sbjct: 189 LANIYYKIGKVDEAISIFKQCIEVNPKHENTYINLGLTYKRKGMSEEALILFKRCLEINS 248
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
N A ++ G+ +I + + L ++PS
Sbjct: 249 RNEVAHYNIGLEYIHQGRVDEAILVFLKSLDLNPS 283
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 10/158 (6%)
Query: 43 LQYAYGN---FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
L YAY ++I+ K+ + L PN +Y LGLA G + A Y A L P
Sbjct: 87 LGYAYHQKKMINESIACYKKNIELHPNDHLSYYNLGLALHDSGKFQEAISSYNKAIQLKP 146
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
++ L G +A++ + + PK + LA+ Y +IG ++A +
Sbjct: 147 NYEMCYEALGNLQQDMGLIQEAIFSYNKILEVNPKYENGYNCLANIYYKIGKVDEAISIF 206
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+Q ++ P + + ++ G T + G+ EE L
Sbjct: 207 KQCIEVNPKHENT-------YINLGLTYKRKGMSEEAL 237
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG+A Y E++I K + ++PN YN+LGL G + + +
Sbjct: 461 LGQAY--YDQNKIEESIQCFKICLEINPNNSLYYNSLGLCFCQKGQLDEGIACFKKSLDI 518
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P D L KG+ ++ + + P++ +L Y + G E A +
Sbjct: 519 NPSDENTLNNLGNTYRLKGNIEDSIKCYKVCLEINPRNDICHCNLGIAYFQKGIIEGAIQ 578
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
SY++ ++ P N + F + G+ +I + L+++P +
Sbjct: 579 SYKKSLEINPKNEYSLYYLGLAFYEKGKFDDAILSYRQCLELNPQE 624
>gi|156740237|ref|YP_001430366.1| hypothetical protein Rcas_0215 [Roseiflexus castenholzii DSM 13941]
gi|156231565|gb|ABU56348.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii
DSM 13941]
Length = 2262
Score = 55.8 bits (133), Expect = 7e-05, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 8/237 (3%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P + LG+ ++ + G++ A + L+ V L + + LG A A G +SA Y
Sbjct: 661 PMLYARLGQ--VRRSIGDWSGARAALQRAVELDSSNAALQDELGQALEACGEMESALAAY 718
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A L P+ + ++L GD A +R A+ P + LA GD
Sbjct: 719 RAAVSLDPQCATYHRRLGALLRNCGDNDGAAAALRTALELRPDSAATYGELAELLWRTGD 778
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
++A ++Y + L P++ D T+ + + G++ + +L + L + P ADL
Sbjct: 779 TDQALDAYRRAHALAPESPDHTRALGLAYRRLGRSRDAERLLRQALTLAPERADLHYDYG 838
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFA 268
+ A +E ++ L E A ++ + AG LR G++ +A L A
Sbjct: 839 IAAEALEQ--WDTALAAYEQAAMLDPQCADYAR----AAGALLLRRGDLARARSLLA 889
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 7/255 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A + L++++ S + TY LG ++ G++ A + Y A L P D L+ +
Sbjct: 607 GRLEEAEAELRDLIAASGSDAATYAELGEVYADAGHNAKAVESYARAVALRPDDPMLYAR 666
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L GD + A +++A+ + + +L+ L G+ E A +Y L P
Sbjct: 667 LGQVRRSIGDWSGARAALQRAVELDSSNAALQDELGQALEACGEMESALAAYRAAVSLDP 726
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ L CG + L L++ P A + L +L ++ L
Sbjct: 727 QCATYHRRLGALLRNCGDNDGAAAALRTALELRPDSA--ATYGELAELLWRTGDTDQALD 784
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
A + E P + G+ Y RLG AE L A + ADL +
Sbjct: 785 AYRRAHAL---APESPDHTRA-LGLAYRRLGRSRDAERLLRQ-ALTLAPERADLHYDYGI 839
Query: 288 TLMSLGHSNSALKYY 302
+L ++AL Y
Sbjct: 840 AAEALEQWDTALAAY 854
Score = 43.5 bits (101), Expect = 0.37, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 68/163 (41%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+LQ G E+A ++ + P LG A LGN +A + A L P
Sbjct: 2039 GALQEEQGEIERAAWHYEQALTRDPQNATYCWRLGRAQFELGNPDAARELLERALALDPG 2098
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + D+ A+ + ++A+ P D +L+I LA ++ +++A ++ E
Sbjct: 2099 SADAHATIARLFASENDSRAALVHSQRAVELRPDDPALQIQLAEVLAQMRRFDEARQALE 2158
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ + P + + ++ L G ++G E + P +
Sbjct: 2159 RAVQRAPSDPELLARYGEMALTVGLYHEALGAFERAIAQRPDE 2201
Score = 42.7 bits (99), Expect = 0.65, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 8/145 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETY-NTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
G EQA + L+ V+ + LG + G A + Y AA P + A +
Sbjct: 538 GELEQAAAALETVLDAQQKRSAAAAHELGHVYLQQGRFARALEAYRHAAQQQPGEPAYRR 597
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ + G +A +R I A D + L Y + G KA ESY + L
Sbjct: 598 SVAVALRRLGRLEEAEAELRDLIAASGSDAATYAELGEVYADAGHNAKAVESYARAVALR 657
Query: 167 PDNVDATKTGAQLFLKCGQTARSIG 191
PD+ L+ + GQ RSIG
Sbjct: 658 PDD-------PMLYARLGQVRRSIG 675
Score = 42.7 bits (99), Expect = 0.74, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 15/270 (5%)
Query: 5 NYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQ------AISLLK 58
++ YR +L +++GR ++ + + + Y + AI
Sbjct: 1929 DHADYRYAQARLLRQQGRIDEARQVFEKALEHEPQQGAWHYELAELLRQQRDPAAIEHYA 1988
Query: 59 EVVRLSPNLPETYNTLGLAHSALGNH-KSAFDFYVIAAHLSPKD-SALWKQLLTFAVQKG 116
V+L+P+ P + LGL L + A V A L D +AL ++G
Sbjct: 1989 AAVQLAPDEPRHW--LGLVEGLLERQERDAAQETVERALLRFGDHAALHAVAGALQEEQG 2046
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
+ +A ++ QA+ +P++ + L E+G+ + A E E+ L P + DA T
Sbjct: 2047 EIERAAWHYEQALTRDPQNATYCWRLGRAQFELGNPDAARELLERALALDPGSADAHATI 2106
Query: 177 AQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVR 236
A+LF + ++ + +++ P D L + L +L + +++ Q +E A
Sbjct: 2107 ARLFASENDSRAALVHSQRAVELRPDDPALQI--QLAEVLAQMRRFDEARQALERAVQRA 2164
Query: 237 FSGKELPLK---LKVKAGICYLRLGNMEKA 263
S EL + + + G+ + LG E+A
Sbjct: 2165 PSDPELLARYGEMALTVGLYHEALGAFERA 2194
Score = 40.0 bits (92), Expect = 3.8, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 35/171 (20%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P GE A L + G+ +QA+ + L+P P+ LGLA+ LG + A
Sbjct: 757 ELRPDSAATYGELAELLWRTGDTDQALDAYRRAHALAPESPDHTRALGLAYRRLGRSRDA 816
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
L +Q LT A ++ D ++Y I AE
Sbjct: 817 --------------ERLLRQALTLAPERAD----LHY-DYGIAAEA-------------- 843
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
+ ++ A +YEQ L P D + L L+ G AR+ +L L+
Sbjct: 844 -LEQWDTALAAYEQAAMLDPQCADYARAAGALLLRRGDLARARSLLAVALR 893
>gi|355700850|gb|EHH28871.1| hypothetical protein EGK_09151 [Macaca mulatta]
Length = 830
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N QAI L +VV + P P+ + LG + G+ AF +Y + P + + + L
Sbjct: 567 NPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYRYFPCNIEVIEWL 626
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ + +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ + FP+
Sbjct: 627 GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPE 686
Query: 169 NV 170
NV
Sbjct: 687 NV 688
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEV 554
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P D + +L +GD +QA Y ++ R
Sbjct: 555 LYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ +EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQIVR 236
++ + P ++ + LV + L + Y + L+ +E + +R
Sbjct: 675 DTYKDTHRKFPE--NVXXLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIR 723
>gi|17229979|ref|NP_486527.1| hypothetical protein all2487 [Nostoc sp. PCC 7120]
gi|17131579|dbj|BAB74186.1| all2487 [Nostoc sp. PCC 7120]
Length = 224
Score = 55.8 bits (133), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 81/171 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ AI++ ++ R+ P ++ +G H+ GN ++A Y A ++P +S +
Sbjct: 53 GDYNGAIAVYQQAARMEPRNARIHSGIGYLHAKQGNFQAALAAYRRAIAINPNNSDFFYA 112
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GDT A R+AI+ ++S + L +GD+ A ++EQ KL
Sbjct: 113 VGYIKGNMGDTPGAKEAYRRAIQLNRNNVSAYVGLGITQSRLGDFRSANWAFEQAIKLDR 172
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
+N + A ++ + QT ++ +L++ ++ D + + A+L +
Sbjct: 173 NNAQTYEFMAAMYKQRRQTKQASNLLQKARDLYQRRNDADGVARVEAMLQQ 223
>gi|16359058|gb|AAH15995.1| Similar to general transcription factor IIIC, polypeptide 3
(102kD), partial [Homo sapiens]
Length = 504
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%)
Query: 242 LPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
+P+ + VK +C + L +E L +N D DL +VA+ + +G NSAL
Sbjct: 2 VPIDITVKLMVCLVHLNILEPLNPLLTTHLEQNPEDMGDLYLDVAEAFLDVGEYNSALPL 61
Query: 302 YHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEE 361
L + + ++L+ AEC +L A + K +D ++DAR++L++L +
Sbjct: 62 LSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQL 121
Query: 362 AKEEEAITLLSPPKDLDSLDMNSDKS 387
+ E+A+ L P D D+L +++ +
Sbjct: 122 GQPEKALEALEPMYDPDTLAQDANAA 147
>gi|108762237|ref|YP_633061.1| hypothetical protein MXAN_4904 [Myxococcus xanthus DK 1622]
gi|14517942|gb|AAK64445.1|AF377339_6 serine/threonine kinase associate protein KapB [Myxococcus xanthus
DZF1]
gi|108466117|gb|ABF91302.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 271
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A+ KE + L P P+ + LGL ++ G + A A L +D+ +L
Sbjct: 95 EMAVEEYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAA 154
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ +GD A+ +++ +R EP + ++ L + + G Y +A +YE+ + L P+++
Sbjct: 155 LMMDEGDYRSAITQLKEVVRLEPDNFEAQLDLGICFAQKGFYAEAERAYERARALNPEDL 214
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYL 197
+ LF G+ ++ L++ L
Sbjct: 215 LLNYNLSALFALWGRPKDAVQYLQKSL 241
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+L G++ AI+ LKEVVRL P+ E LG+ + G + A Y A L+P+
Sbjct: 153 AALMMDEGDYRSAITQLKEVVRLEPDNFEAQLDLGICFAQKGFYAEAERAYERARALNPE 212
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE-PK 134
D L L G A+ Y+++++ A+ PK
Sbjct: 213 DLLLNYNLSALFALWGRPKDAVQYLQKSLTADRPK 247
>gi|168054571|ref|XP_001779704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668902|gb|EDQ55500.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y +F+ I+ +E +R+ P E Y + A GN A +Y +A L P
Sbjct: 39 GAIYYQLHDFDMCIAKNEEAIRIEPQFAECYGNMANALKEKGNIDLAIQYYSVAIELKPN 98
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
W L + ++KG +A + A+ P+ + +L + G A Y
Sbjct: 99 FCDAWSNLASAYMRKGRLQEAAECCQHALTLNPRLVDAHSNLGNLLKAQGLTHHAYLCYV 158
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP--SDADLSVIDLLVAILME 218
+ +L P A A L ++ G+ +++ +E +++ P +DA L++ ++L AI
Sbjct: 159 EAIRLQPTFAIAWSNLAGLLMEAGELQKALAYYKEAIRLKPNFADAHLNLGNVLKAIGRH 218
Query: 219 NNA---YEKTLQ 227
A Y +++Q
Sbjct: 219 QEAISCYNRSIQ 230
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A + + L+P L + ++ LG A G A+ YV A L P + W
Sbjct: 114 GRLQEAAECCQHALTLNPRLVDAHSNLGNLLKAQGLTHHAYLCYVEAIRLQPTFAIAWSN 173
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ G+ +A+ Y ++AIR +P ++L + IG +++A Y + +L P
Sbjct: 174 LAGLLMEAGELQKALAYYKEAIRLKPNFADAHLNLGNVLKAIGRHQEAISCYNRSIQLRP 233
Query: 168 DNVDATKTGAQLFLKCG 184
D A A ++ + G
Sbjct: 234 DYAIAYGNLASVYYEQG 250
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L G ++A++ KE +RL PN + + LG A+G H+ A Y + L P
Sbjct: 175 AGLLMEAGELQKALAYYKEAIRLKPNFADAHLNLGNVLKAIGRHQEAISCYNRSIQLRPD 234
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + L + ++G A+ Y +QA+ + I +L + + G E++ YE
Sbjct: 235 YAIAYGNLASVYYEQGLLDYAILYYKQALLLDSSFIEAYNNLGNALKDAGRVEESISCYE 294
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
+L ++ A ++++ + + + L V
Sbjct: 295 NCLQLQNNHPQALTNLGNIYMEWNMISTAATFYKATLSV 333
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E++IS + ++L N P+ LG + +A FY ++ SA +
Sbjct: 284 GRVEESISCYENCLQLQNNHPQALTNLGNIYMEWNMISTAATFYKATLSVTTGLSAPYSN 343
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T Q+G+ A A+ + +R +P ++ + EIG +A + Y + + P
Sbjct: 344 LATIYKQQGNYADAIACYNEVMRVDPMAADGLVNRGNTLKEIGRVSEAIQDYIRAVAIRP 403
Query: 168 DNVDATKTGAQLFLKCGQTARSI 190
+A A + G +I
Sbjct: 404 TMAEAHANLASAYKDSGHVEAAI 426
>gi|449132610|ref|ZP_21768625.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula europaea 6C]
gi|448888289|gb|EMB18611.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula europaea 6C]
Length = 680
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E+A+SL L+P L E YN LG +G+ +++ A + P + +
Sbjct: 490 GDLEEALSLYNRATELNPGLAEAYNGLGATQGMMGDFEASEATLKRAIEIDPNYANAYGN 549
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T +G +A+ ++A++ P+ + R +L + +E A + ++ + P
Sbjct: 550 LATLRSAQGRNEEAIELFQKAVQLAPERMDHRTNLGRVLMSAQRWEDAIDVWQSVLDESP 609
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
D+V A + +T +IG E L++ P+
Sbjct: 610 DDVSALLNLGVIAANQQRTKDAIGYFESVLEIVPN 644
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 28 NKLSPGVTKML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+L+PG+ + G + Q G+FE + + LK + + PN Y L SA G ++
Sbjct: 503 TELNPGLAEAYNGLGATQGMMGDFEASEATLKRAIEIDPNYANAYGNLATLRSAQGRNEE 562
Query: 87 AFDFYVIAAHLSPK----DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
A + + A L+P+ + L + L++ Q+ + A ++ + + P D+S ++L
Sbjct: 563 AIELFQKAVQLAPERMDHRTNLGRVLMS--AQRWEDAIDVW--QSVLDESPDDVSALLNL 618
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
+ A +E + ++ P+++ AT + G T + E+Y +
Sbjct: 619 GVIAANQQRTKDAIGYFESVLEIVPNHLSATYNLGAMHDALGNTNEA----EQYFR 670
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 69/156 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ +A + L+ + + PN ++ L A LG+ + A Y A L+P + +
Sbjct: 456 GDYLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYNRATELNPGLAEAYNG 515
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L GD + +++AI +P + +LA+ G E+A E +++ +L P
Sbjct: 516 LGATQGMMGDFEASEATLKRAIEIDPNYANAYGNLATLRSAQGRNEEAIELFQKAVQLAP 575
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ +D ++ + + +I + + L P D
Sbjct: 576 ERMDHRTNLGRVLMSAQRWEDAIDVWQSVLDESPDD 611
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+L+ A G E+AI L ++ V+L+P + LG + + A D + SP
Sbjct: 551 ATLRSAQGRNEEAIELFQKAVQLAPERMDHRTNLGRVLMSAQRWEDAIDVWQSVLDESPD 610
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D + L A + T A+ Y + P +S +L + + +G+ +A + +
Sbjct: 611 DVSALLNLGVIAANQQRTKDAIGYFESVLEIVPNHLSATYNLGAMHDALGNTNEAEQYFR 670
Query: 161 QIQKLFP 167
+ ++L P
Sbjct: 671 RAERLQP 677
>gi|411117461|ref|ZP_11389948.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410713564|gb|EKQ71065.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 552
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 2/175 (1%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P V +LG A+ Q GN E A+ + + L PN + +N LG+ GN + A Y
Sbjct: 38 PQVLYLLGLANHQR--GNLEVAMQWYRRAIALQPNYTDAHNNLGVLLVQQGNLQQATIHY 95
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A +P + + L Q G A+ + R AI EP + +L E+G
Sbjct: 96 QAALQTNPNNPRVHTNLGVILQQLGRIQDAIAHYRAAIDLEPNLAAAHTNLGHALKELGQ 155
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ A Y+ Q+L P N +A + + G+ ++ I + + P+ +L
Sbjct: 156 LDAAINHYKIAQQLMPTNPEAYRDLGDGLQEQGRFEEALEIYNRAIAIAPNHIEL 210
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 3/170 (1%)
Query: 35 TKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
T++L A + G +A L ++ + PN P+ LGLA+ GN + A +Y A
Sbjct: 5 TELLNAAIRHHQAGQLLEAERLYQDALLQQPNQPQVLYLLGLANHQRGNLEVAMQWYRRA 64
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
L P + L VQ+G+ QA + + A++ P + + +L ++G +
Sbjct: 65 IALQPNYTDAHNNLGVLLVQQGNLQQATIHYQAALQTNPNNPRVHTNLGVILQQLGRIQD 124
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG---ILEEYLKVHP 201
A Y L P+ A + GQ +I I ++ + +P
Sbjct: 125 AIAHYRAAIDLEPNLAAAHTNLGHALKELGQLDAAINHYKIAQQLMPTNP 174
>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3418
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 9/276 (3%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S N S V +LG+A L+ G +QAI LK+ ++L+P P LG A+ +
Sbjct: 2851 SSNPNSYEVQYLLGKARLEI--GCPDQAIYSLKKCLQLNPKFPNINGILGEAYEQDQQYL 2908
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A Y ++P+++ + ++ + + QA I + I +P+D + A
Sbjct: 2909 EALIHYQKQTQINPENTEILFKMALIQISYDNFNQAKQLIDKLIELKPQDYLVYSAQAYL 2968
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y G+ ++A +S++Q + P N A + G + + +E K+ P+D
Sbjct: 2969 YKRQGNLQEAIKSFDQSLSIQPTNTFTLFNLALCHGELGNIKQEKKMYKEIQKISPNDRK 3028
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
+ ++ L I + YEK +Q +Q ++ + G+CY G+ + A
Sbjct: 3029 M--LNNLGIIYRQKGKYEKAIQLF--SQCIKLD--QYFCDYFTNLGLCYYAKGDYDGAIN 3082
Query: 266 LFADLQWKNAIDHADLITEVADTLMSLGHSNSALKY 301
F + I+ + + +A L + G A+KY
Sbjct: 3083 YFQKGYTLDRIN-VECLLNLASALKAKGEPQQAIKY 3117
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++AI + + + P T L L H LGN K Y +SP D +
Sbjct: 2973 GNLQEAIKSFDQSLSIQPTNTFTLFNLALCHGELGNIKQEKKMYKEIQKISPNDRKMLNN 3032
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L QKG +A+ Q I+ + +L Y GDY+ A +++ L
Sbjct: 3033 LGIIYRQKGKYEKAIQLFSQCIKLDQYFCDYFTNLGLCYYAKGDYDGAINYFQKGYTLDR 3092
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
NV+ A G+ ++I L++ +K++P+
Sbjct: 3093 INVECLLNLASALKAKGEPQQAIKYLQKIIKINPN 3127
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 72/192 (37%), Gaps = 34/192 (17%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
QY F+ AI L PN E +G H + + A F+ + +PKD+
Sbjct: 1647 QYQKNQFKSAIQYLSVCEAQKPNTYEIIKLIGQCHKQMNQTEKAIQFFELCIDQNPKDAE 1706
Query: 104 LWKQLLTFAVQKGDTAQAM----------------YYIRQAIRAEPKDISLRIHLAS--- 144
+ L ++GD Q + +Y I E KD + I A
Sbjct: 1707 VLILLAESLYKQGDVKQTLEMYQKAFKYNTKDSQYFYQYAKILFETKDFNQAIIFAQECI 1766
Query: 145 ---------------FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARS 189
Y+ IGD KA ++++ ++ + D + ++K GQT +
Sbjct: 1767 KINSSLDNAQNLLGLCYMNIGDMNKAIAAFKKQGQINRLHKDYLLNLGKAYIKKGQTVDA 1826
Query: 190 IGILEEYLKVHP 201
I L +++ ++P
Sbjct: 1827 ISTLSKFMNLYP 1838
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 136/325 (41%), Gaps = 30/325 (9%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
YA G+++ AI+ ++ L E L A A G + A + ++P +A
Sbjct: 3072 YAKGDYDGAINYFQKGYTLDRINVECLLNLASALKAKGEPQQAIKYLQKIIKINPNYTAA 3131
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L Q G+ + A + +I +P I+ I LA Y E DY+ + + +Q +
Sbjct: 3132 YYNLGIIQKQNGNISDAQTSFKLSIEKDPYHINSVIQLAIIYREQNDYDNSKKLLKQALE 3191
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
+ +N A A L+ + + A+ + L + L P +A + ++ + ++ N E
Sbjct: 3192 IDSNNELANFNIALLYRQKCKHAKELNALLKALSYSPKNAKY-LHNIGICQRLQENYQEA 3250
Query: 225 TLQHIEHAQIVRFSGKEL--------PLKLKVKAGICYLRL----GNMEKAE----ILFA 268
+ + QI + K LK+ ++ CY++ N E+A I +
Sbjct: 3251 LIYFKQSVQIDSENAKYYYNLADIYNCLKMPIEEINCYMKCIQLNPNFERAHYNLGIAYE 3310
Query: 269 DLQ-WKNAIDHADLITEVADT----LMSLGHSNS-------ALKYYHFLETNAGTDNGYL 316
+++ +K AI + E+A + SLG+ S + +YY F + DN
Sbjct: 3311 NIKNYKEAISCFEKCIEIAPSNDQYFFSLGNIYSLQRNFEKSNEYYQFC-ISLNQDNIEC 3369
Query: 317 YLKLAECYLSLKERAHAIMFFYKAL 341
+A Y+ LK+ + AI + L
Sbjct: 3370 LNNMAVNYIKLKQHSEAIKIYQNCL 3394
>gi|225621426|ref|YP_002722685.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225216247|gb|ACN84981.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae
WA1]
Length = 817
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 83/179 (46%), Gaps = 2/179 (1%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
KN S +G +Y F++A+ ++ + ++PNL YN + L ++G
Sbjct: 172 KNDTSSSAYNTIGLC--KYNLNEFDEALKCYEKAIEINPNLISAYNNIALIKHSVGLDYE 229
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A + A + P + + ++ + ++ G +A Y+ + I P DI + + +
Sbjct: 230 ALSYLNKALEIDPNNIETYLKIYSIKLELGLENEANEYLNKIIEMHPDDIYVYDRIGNIK 289
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ G E++ E ++ ++ P+ +DA A K ++ LE+ L+++P+ AD
Sbjct: 290 IDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEALEYLEKALQIYPNSAD 348
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 74/162 (45%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y ++E +I + + ++P Y LGL LGN+K A D+Y A ++P S
Sbjct: 460 YEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLA 519
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + + D ++ +A+ + + I++ Y Y+KA E Y ++ +
Sbjct: 520 YYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAVYDKAIEYYNKVLE 579
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ P+ V+A A + ++ I ++ ++++P + D+
Sbjct: 580 INPNKVNAYYNIAFSLSNMDKYEEALEIYDKVIRMYPGNFDV 621
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+E+AI + + L+ ++ Y +GLA+ + +++++ +Y A ++P+ ++ + L
Sbjct: 430 NYEEAIRNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINL 489
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISL---RIHLASFYVEIGDYEKAAESYEQIQKL 165
G+ +A+ Y ++A+ P D SL I LA +E DY+ + E + + +L
Sbjct: 490 GLIKHNLGNYKEAIDYYKKALEINP-DYSLAYYNIALAEMSLE--DYKNSLEDFNKALEL 546
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
D + ++ + ++I + L+++P+
Sbjct: 547 GYDEAEIYINIGLIYSRQAVYDKAIEYYNKVLEINPN 583
>gi|376003788|ref|ZP_09781591.1| TPR repeat-containing protein [Arthrospira sp. PCC 8005]
gi|375327819|emb|CCE17344.1| TPR repeat-containing protein [Arthrospira sp. PCC 8005]
Length = 553
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +EQA+S + ++ P+L + + G A S LG +K A Y A P
Sbjct: 245 YHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEP 304
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W G+ QA+ QA++ +P D + + +G+Y++A SY+Q K
Sbjct: 305 WFSRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALK 364
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
PD+ A G+ ++I ++ LK P D
Sbjct: 365 YKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDD 403
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++QAIS + ++ P+ + G+A S LG +K A Y A P W
Sbjct: 384 GEYKQAISSYDQALKYKPDDHVAWYNRGVALSYLGEYKQAISSYDQALKYKPDFHVAWYN 443
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G+ QA+ +A++ +P + + +G+Y++A SY+Q K P
Sbjct: 444 RGNALSYLGEYKQAISSYDEALKYKPDYHVAWYNRGNALSYLGEYKQAISSYDQALKYKP 503
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D +A G+ ++I ++ LK P
Sbjct: 504 DLHEAWYNRGVALSDLGEYKQAISSFDQALKYKP 537
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 67/168 (39%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
K + +Y G+ AIS ++ + P+ + + G+A S G +K A Y A
Sbjct: 168 KWFNDGLQRYDNGDVRGAISSFEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQAL 227
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
P W G QA+ QA++ +P + ++G+Y++A
Sbjct: 228 KYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQA 287
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
SY++ K PD + + G+ ++I ++ LK P D
Sbjct: 288 LSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAISSYDQALKYKPDD 335
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++QAIS + ++ P+ + G A S LG +K A Y A P W
Sbjct: 418 GEYKQAISSYDQALKYKPDFHVAWYNRGNALSYLGEYKQAISSYDEALKYKPDYHVAWYN 477
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G+ QA+ QA++ +P + ++G+Y++A S++Q K P
Sbjct: 478 RGNALSYLGEYKQAISSYDQALKYKPDLHEAWYNRGVALSDLGEYKQAISSFDQALKYKP 537
Query: 168 D 168
D
Sbjct: 538 D 538
>gi|426225291|ref|XP_004006800.1| PREDICTED: transmembrane and TPR repeat-containing protein 1
isoform 1 [Ovis aries]
Length = 877
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y+ P S L
Sbjct: 560 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYLAGIKKCPDSSDLHNNYGV 619
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +GD A E Y++ ++
Sbjct: 620 FLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGDNNVAEEWYKRALQVARKTE 679
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ E + + PS +L + + ++A++ + EK HI
Sbjct: 680 ILSPLGA-LYYNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSHI 738
>gi|336469851|gb|EGO58013.1| hypothetical protein NEUTE1DRAFT_82136 [Neurospora tetrasperma FGSC
2508]
gi|350290468|gb|EGZ71682.1| TPR-like protein [Neurospora tetrasperma FGSC 2509]
Length = 1036
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI+++KE++R P P+ +N L L H LGN ++A + A L PKD+ W +
Sbjct: 117 YQEAINMVKEIIRQRPATPQAWNLLSLIHEELGNREAATMCLISGAWLIPKDARHWMNVA 176
Query: 110 TFAVQKGDT------------AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+ + D +A+ QA++A+ +++ R A +++G A
Sbjct: 177 LYCLYGVDMMDETDPRRKLALERAVMCYSQALQADKQNVEARTGKADALMQLGQSHLALA 236
Query: 158 SYEQIQKLFPDNVDATKTGAQLFL 181
Y + K+ P N+ + A+ L
Sbjct: 237 QYLRALKVQPLNIRTVRNLAEAAL 260
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 236 RFS----GKELPLKLKVKAGICYLRLGNMEKAEILF------ADLQWKNAIDHADLITEV 285
RFS G+ LP+ L+ + + +++G+M +AE AD ++ D D + ++
Sbjct: 366 RFSPMQYGRALPVDLRARLYVFRMKMGDMYEAEKHLTSLDPSADTAVEDFYDFPDCLKDI 425
Query: 286 ADTLMSLGHSNSALKYYHFLE---TNAG--TDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
+ L+ AL+Y+ E AG + + + + L C+++L +++ A F A
Sbjct: 426 GNALLDNESPAKALQYFSLYEKIADQAGDISMDADILVSLGRCHMALGDKSAAEERFIAA 485
Query: 341 LDRFEDNIDARLTLASL---LLEEAKEEEAITLLSPPKDLDS 379
++ EDNI+AR+ LA++ + + EEA L+ +L++
Sbjct: 486 IEDDEDNIEARVCLANMYEHVSDREGREEAFLLVRDAMNLEA 527
>gi|239915965|ref|NP_033402.2| intraflagellar transport protein 88 homolog [Mus musculus]
gi|148704224|gb|EDL36171.1| intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 825
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 34/195 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV------------ 92
+A G++E+A KE +R + E +GL + L A D ++
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSFLKLHAILRNSAQV 555
Query: 93 ---IA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
IA + P DS +L +GD +QA Y ++ R
Sbjct: 556 LCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYR 615
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ EKA + +E+ + P V A F + G +++
Sbjct: 616 YFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 675
Query: 191 GILEEYLKVHPSDAD 205
+E + P + +
Sbjct: 676 DTYKEIHRKFPENVE 690
>gi|222423063|dbj|BAH19513.1| AT3G04240 [Arabidopsis thaliana]
Length = 750
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++ Y ++ I+ +E +R+ P E Y + A G+ A +Y+IA L P
Sbjct: 94 GAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPN 153
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ W L + ++KG ++A +QA+ P + +L + G +A Y
Sbjct: 154 FADAWSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYL 213
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ P A A LF++ G R++ +E +K+ P+ D
Sbjct: 214 EAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPD 258
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 68/152 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +A+ KE V+L P P+ Y LG + ALG A Y A + P + +
Sbjct: 237 GDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNSAMAFGN 296
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + ++G A+ + +QA+ +P+ + +L + +IG ++A Y Q L P
Sbjct: 297 IASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQP 356
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
++ A ++++ + + + L V
Sbjct: 357 NHPQAMANLGNIYMEWNMMGPASSLFKATLAV 388
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +A ++ + L+P L + ++ LG A G A+ Y+ A + P + W
Sbjct: 169 GRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSN 228
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ GD +A+ Y ++A++ +P ++L + Y +G +A Y+ ++ P
Sbjct: 229 LAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRP 288
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++ A A ++ + GQ +I ++ L P
Sbjct: 289 NSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDP 322
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 13/219 (5%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G+F+QA+ V + +P + +G + L + A + P+ +
Sbjct: 64 YKGGDFKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAEC 123
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + +KGDT +A+ Y AI P +LAS Y+ G +A + +Q
Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALS 183
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P VDA L G + E +++ P+ A L + ME+ +
Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFA--IAWSNLAGLFMESGDLNR 241
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
LQ+ + A +KLK YL LGN+ KA
Sbjct: 242 ALQYYKEA-----------VKLKPAFPDAYLNLGNVYKA 269
>gi|74149301|dbj|BAE22424.1| unnamed protein product [Mus musculus]
Length = 825
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 34/195 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV------------ 92
+A G++E+A KE +R + E +GL + L A D ++
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSFLKLHAILRNSAQV 555
Query: 93 ---IA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
IA + P DS +L +GD +QA Y ++ R
Sbjct: 556 LCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYR 615
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ EKA + +E+ + P V A F + G +++
Sbjct: 616 YFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 675
Query: 191 GILEEYLKVHPSDAD 205
+E + P + +
Sbjct: 676 DTYKEIHRKFPENVE 690
>gi|354476527|ref|XP_003500476.1| PREDICTED: intraflagellar transport protein 88 homolog [Cricetulus
griseus]
Length = 825
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 34/195 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV------------ 92
+A G++E+A KE +R + E +GL + L A D ++
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSFLKLHAILRNSAQV 555
Query: 93 ---IA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
IA + P DS +L +GD +QA Y ++ R
Sbjct: 556 LCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYR 615
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ EKA + +E+ + P V A F + G +++
Sbjct: 616 YFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 675
Query: 191 GILEEYLKVHPSDAD 205
+E + P + +
Sbjct: 676 DTYKEIHRKFPENVE 690
>gi|220907053|ref|YP_002482364.1| hypothetical protein Cyan7425_1633 [Cyanothece sp. PCC 7425]
gi|219863664|gb|ACL44003.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 358
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+T++L + G + QA+++ ++ + L ++ +G + G+ A Y
Sbjct: 36 LTELLQQGRQLVTKGEYGQALTIYQQAINLDSGNARLFSAIGFLQAQQGDFAEAALAYQK 95
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L ++ + L GD A RQAI+ P+ I L GD +
Sbjct: 96 AIALENNNADFYYALGFSLANLGDNPAAATAYRQAIQLNPRKIEAYQGLGVVLSRHGDVK 155
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
A ++Y QI L P N A + + L+ GQTA++I L++ + P + ++L +
Sbjct: 156 GALDTYRQIVALQPRNWSAQEAIGVILLRQGQTAQAIASLKKAELLAPRSGSVQ-LNLAL 214
Query: 214 AILMENNAYEKT 225
A + N E T
Sbjct: 215 AWFSQGNVVEGT 226
>gi|194333366|ref|YP_002015226.1| hypothetical protein Paes_0523 [Prosthecochloris aestuarii DSM 271]
gi|194311184|gb|ACF45579.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii
DSM 271]
Length = 582
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 23/319 (7%)
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y GL +A G+++SA + Y + P A + A +Y A+
Sbjct: 68 YLVEGLLCAAKGDYQSALEAYGLVLAREPHAGAASYASAQAWIGLDQLDSARHYSSIAVE 127
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
++P + R LA+ Y E YE AA ++ + +L P N+ + AQ +L G+ +++
Sbjct: 128 SDPSNKYYRGMLAAIYHEQKSYELAAREFQTLSELDPSNITVLYSLAQSYLSAGEGGKAL 187
Query: 191 GILEEYLKVHPSDA-DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELP--LKLK 247
+ L+ PSD LS I L K Q+ E +R +++P KL+
Sbjct: 188 KVYLRILRFDPSDERTLSRILWLEL---------KLHQYREAIATLRSLIRQVPDNQKLR 238
Query: 248 VKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLET 307
+ G YL++ +KA +F L A DH + D L L++ L
Sbjct: 239 LTLGELYLQIDEPQKAIEIFEAL----ARDHPAFLPAWVDLLGVRAEQGDPLRFQECLNR 294
Query: 308 NAGTDNGYLY--LKLAECYLSLKE-----RAHAIMFFYKALDRFEDNIDARLTLASLLLE 360
D+ L ++LA ++ E A A++ + DN++ L A L
Sbjct: 295 YYSLDHVTLNQKIELARLFMIRSELDGIYTAPALVMLERIASEEPDNLNVLLMRAMLYSR 354
Query: 361 EAKEEEAITLLSPPKDLDS 379
+ + +EA L+ +LDS
Sbjct: 355 QERYQEAREGLTRVLELDS 373
>gi|298248115|ref|ZP_06971920.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297550774|gb|EFH84640.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 652
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 29 KLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P ++ G L N E+A++ ++ + + P Y G+A L + A
Sbjct: 377 RLDPTSAEVYGNKGLLLRRLNRMEEALAAYEQAIHIDPTHVSAYFGKGMALQKLKRDEEA 436
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ A L+P D+ + G +A+ Q I EP IS H
Sbjct: 437 LPVFEQAIQLNPTDANIHFLKGCSLEMLGRAEEALTAFEQVIHLEPTRISAYSHKGILLR 496
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+G +E+A E++EQ +L P N DA + ++ G+ ++ E+ ++++P DA +
Sbjct: 497 TLGRHEEALEAFEQSIRLDPTNADAYQAKGEVLDTLGRLEEALEAFEQSIRLNPKDASV 555
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD-SALWKQLL 109
E+A+ ++ +RL P E Y GL L + A Y A H+ P SA + + +
Sbjct: 366 EEALQAYEQAIRLDPTSAEVYGNKGLLLRRLNRMEEALAAYEQAIHIDPTHVSAYFGKGM 425
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
K D +A+ QAI+ P D ++ +G E+A ++EQ+ L P
Sbjct: 426 ALQKLKRDE-EALPVFEQAIQLNPTDANIHFLKGCSLEMLGRAEEALTAFEQVIHLEPTR 484
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-----SVIDLLVAILMENNAYEK 224
+ A L G+ ++ E+ +++ P++AD V+D L E+
Sbjct: 485 ISAYSHKGILLRTLGRHEEALEAFEQSIRLDPTNADAYQAKGEVLDTL-------GRLEE 537
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID--HADLI 282
L+ E Q +R + K+ + G+ L +ME+A A+ ++ +D +A
Sbjct: 538 ALEAFE--QSIRLNPKDASVYF--SKGLTLWGLKHMEEA---LANFEYAIQLDPKNATFY 590
Query: 283 TEVADTLMSLGHSNSAL 299
L +GH+ AL
Sbjct: 591 RTKGILLRIIGHNEEAL 607
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-- 105
G E+A+ ++ +RL P + Y G LG + A + + + L+PKD++++
Sbjct: 499 GRHEEALEAFEQSIRLDPTNADAYQAKGEVLDTLGRLEEALEAFEQSIRLNPKDASVYFS 558
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
K L + ++ + A A + AI+ +PK+ + IG E+A + E +L
Sbjct: 559 KGLTLWGLKHMEEALANF--EYAIQLDPKNATFYRTKGILLRIIGHNEEALTALEYAVQL 616
Query: 166 FPDNVDATKTGAQLFLKCGQTARS 189
P++ +A + K G+ + +
Sbjct: 617 RPNDAEAYQNKGYALEKLGRMSEA 640
>gi|333996917|ref|YP_004529529.1| hypothetical protein TREPR_3648 [Treponema primitia ZAS-2]
gi|333741255|gb|AEF86745.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
Length = 450
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+ + Y G+ + AI + + PN + Y G A+S ++ A + Y A ++
Sbjct: 261 INRGNSHYKKGDDDLAIKDFTMAISIDPNDADAYTYRGDAYSRKREYRKAIEDYTQAINI 320
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P D +K +KGD +A+ Q I P D Y + GDY++A E
Sbjct: 321 NPDDINAYKTRGRIYYKKGDYNRAIEDYTQVIGINPDDAVAYNSRGIIYYKNGDYDQAIE 380
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILM 217
Y Q + PD + A L L +R I +Y K H D + ++ D AI +
Sbjct: 381 DYTQAINIAPDYAE-----ANLNLAMAHNSRGI----KYTKCH--DYEQALDDFNQAISV 429
Query: 218 ENNAYE 223
+ N Y+
Sbjct: 430 DPNYYD 435
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 103/278 (37%), Gaps = 45/278 (16%)
Query: 29 KLSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG----- 82
+ P T+ Y Y G + AI+ +R P + Y GLA+
Sbjct: 144 NIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPINTDAYIHRGLAYEVKAFIKKS 203
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP--------- 133
H A + + IA ++ P + + GD +A+ QAIR
Sbjct: 204 KHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDYDRAITDFDQAIRINSNYAIAYINR 263
Query: 134 --------------KDISLRIHL----ASFYVEIGD-------YEKAAESYEQIQKLFPD 168
KD ++ I + A Y GD Y KA E Y Q + PD
Sbjct: 264 GNSHYKKGDDDLAIKDFTMAISIDPNDADAYTYRGDAYSRKREYRKAIEDYTQAININPD 323
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
+++A KT +++ K G R+I + + ++P DA + I +N Y++ ++
Sbjct: 324 DINAYKTRGRIYYKKGDYNRAIEDYTQVIGINPDDA--VAYNSRGIIYYKNGDYDQAIED 381
Query: 229 IEHAQIVRFSGKELPLKLKV---KAGICYLRLGNMEKA 263
A + E L L + GI Y + + E+A
Sbjct: 382 YTQAINIAPDYAEANLNLAMAHNSRGIKYTKCHDYEQA 419
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 22/215 (10%)
Query: 28 NKLSPGVTKML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
N + P + +L ++S Y GN++ A L + L+PN Y GLA+S G +
Sbjct: 75 NNIDPNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFLHGLANSGKGEYHH 134
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A Y ++ P + + KG A+ AIR++P + IH Y
Sbjct: 135 AIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPINTDAYIHRGLAY 194
Query: 147 -----VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++ + +A E + + P+NVDA + G R+I ++ ++++
Sbjct: 195 EVKAFIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDYDRAITDFDQAIRINS 254
Query: 202 S----------------DADLSVIDLLVAILMENN 220
+ D DL++ D +AI ++ N
Sbjct: 255 NYAIAYINRGNSHYKKGDDDLAIKDFTMAISIDPN 289
>gi|434392514|ref|YP_007127461.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428264355|gb|AFZ30301.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 291
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-- 105
G+ + AI+ + + ++PN TY G+A+ LGN+++A Y A +PK ++ +
Sbjct: 85 GDHQGAIADYNQAININPNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFNPKFASAYNS 144
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ +L FA+ GD AM QAI+ EP + + GD A Y Q+ +L
Sbjct: 145 RGILRFAL--GDELNAMADFNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILDYTQVLQL 202
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P + DA G+ +I + L+++P+ A+ L + NN ++
Sbjct: 203 NPKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIGNN--QQA 260
Query: 226 LQHIEHA 232
LQ + A
Sbjct: 261 LQDFQQA 267
>gi|291517852|emb|CBK73073.1| ChAPs (Chs5p-Arf1p-binding proteins)./Tetratricopeptide repeat
[Butyrivibrio fibrisolvens 16/4]
Length = 430
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI K+++ L P E ++G + + A +++ A + ++
Sbjct: 54 GLHDEAIENFKKILILEPQNGEALFSIGSIYVLKEDKVKAIEYFNKAEACGYRTPDMYFL 113
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ T + + D QA+ I +AI P D LR+ Y+ Y+ A S +++++L P
Sbjct: 114 MATIFLGEYDEIQAIRNINKAIDIAPLDGELRLFKVRIYLANNKYDLALVSLDEMERLLP 173
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D + AQ+++ G+ + I+E+ K P D++L+ + L V L+E + Y++
Sbjct: 174 DAFEVYSLKAQIYIGQGRNREAREIIEKGCKRFPLDSNLASLKLRV--LVELDLYKEAED 231
Query: 228 HIEHAQIVRFSGKEL 242
I++ ++ K L
Sbjct: 232 QIKYMKMQGLFDKSL 246
>gi|307730646|ref|YP_003907870.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307585181|gb|ADN58579.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1003]
Length = 627
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G EQA++ + + L PNLP +G A +ALG H A + + L P+ + W
Sbjct: 229 ATGRHEQAVASFEATLALQPNLPPAIFGIGNALAALGRHAQAIPYLERSVGLDPQFALAW 288
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
L T G A A+ QA+R +P + ++ A ++ +GD+ + YE
Sbjct: 289 LSLGTAHQALGAHATAVRAFDQALRLQPDLAAAHMNRALAWLALGDFARGLPEYE 343
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 50/257 (19%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G ++AI + + L+P+ P + LG A++A G H+ A D + + L P+D++
Sbjct: 93 ALGQIDEAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFRRSLRLQPEDASSH 152
Query: 106 KQL------------------LTFAVQKGDTA----------------QAMYYIRQAIRA 131
L T ++ G +A+ + A+ A
Sbjct: 153 NNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGMSLNALGRADEAIPCFKAALAA 212
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
EP+ ++ +LA+ + G +E+A S+E L P+ A G+ A++I
Sbjct: 213 EPRFVAAHFNLANTFDATGRHEQAVASFEATLALQPNLPPAIFGIGNALAALGRHAQAIP 272
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKA- 250
LE + + P A +A L A++ HA VR + L L+ + A
Sbjct: 273 YLERSVGLDPQFA--------LAWLSLGTAHQAL---GAHATAVRAFDQALRLQPDLAAA 321
Query: 251 ----GICYLRLGNMEKA 263
+ +L LG+ +
Sbjct: 322 HMNRALAWLALGDFARG 338
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 25/295 (8%)
Query: 64 SPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMY 123
+P + + LG+ G H A + A +L P+D+AL L G +A+
Sbjct: 43 NPTHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPQDAALQLNLGNALKALGQIDEAIE 102
Query: 124 YIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
R A+ P +L + Y G +E AA+++ + +L P++ +
Sbjct: 103 QFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFRRSLRLQPEDASSHNNLGNALHAL 162
Query: 184 GQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE-----HAQIVRFS 238
G+ +I L++ P A L + M NA + + I A RF
Sbjct: 163 GRHEEAIASFRRTLELRPGHA-----GALNNMGMSLNALGRADEAIPCFKAALAAEPRFV 217
Query: 239 GKELPLKLKVKAGICYLRLGNMEKAEILF-ADLQWKNAIDHADLITEVADTLMSLGHSNS 297
L A G E+A F A L + + A I + + L +LG
Sbjct: 218 AAHFNLANTFDA------TGRHEQAVASFEATLALQPNLPPA--IFGIGNALAALGRHAQ 269
Query: 298 ALKYYHFLETNAGTDNGY--LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDA 350
A+ Y LE + G D + +L L + +L A A+ F +AL R + ++ A
Sbjct: 270 AIPY---LERSVGLDPQFALAWLSLGTAHQALGAHATAVRAFDQAL-RLQPDLAA 320
>gi|238589793|ref|XP_002392124.1| hypothetical protein MPER_08345 [Moniliophthora perniciosa FA553]
gi|215457743|gb|EEB93054.1| hypothetical protein MPER_08345 [Moniliophthora perniciosa FA553]
Length = 221
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 14 RKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNT 73
R+ K GR G LS V ++GE + + + +AI +++EV+R+ P +
Sbjct: 56 RRRKKNTGRTVGPV--LSQQVKALIGEGNQAFVDNDLPEAIRVMQEVIRIEPRAAAAWTV 113
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQK---GDTAQAMYYIRQAIR 130
L + + A ++AAHL D+ W L + G QA+Y R+
Sbjct: 114 LAQCYDDMKQPDKALQLRIMAAHLR-HDAEEWDNLARQSKTHRKLGYHQQALYCYRKVYS 172
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+P ++ A EIGD + A +S+ I K P
Sbjct: 173 LDPSNVDALWDRAVLAKEIGDLKTAEQSFMAILKRIP 209
>gi|363729328|ref|XP_003640630.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Gallus gallus]
Length = 817
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P P LG + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDPHVLTKLGKLYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A P + ++ +AS Y G+Y+KA E Y+ I + FP+NV+
Sbjct: 631 CIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEKYKVIHQKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDMG 703
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 91/240 (37%), Gaps = 46/240 (19%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +P + + + +A G++E+A KE +R + E LGL + L
Sbjct: 479 SSDRYNPAA--LTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRID 536
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A D ++ + + + Q+ D QA+ ++ Q I P D + L
Sbjct: 537 EALDCFLKLHAILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPTDPHVLTKLGKL 596
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y GD +A Y + + FP N++
Sbjct: 597 YDNEGDKSQAFHYYYESYRYFPSNIE---------------------------------- 622
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLK--VKAGICYLRLGNMEKA 263
VI+ L A ++ EK +++ E A ++ LP ++K + CY R GN +KA
Sbjct: 623 --VIEWLGAYCIDTQFCEKAIEYFERAALI------LPTQVKWQLMVASCYRRSGNYQKA 674
>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus glucosetrophus
SIP3-4]
gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
SIP3-4]
Length = 927
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI K+ + + P+ E +N+LG+A+S L + A Y A L P + L
Sbjct: 294 EEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYNEAIASYQRAIALMPNYAEAICNLGI 353
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ A+ ++Q++ ++ +HLA Y +G +E+AA YE KL N
Sbjct: 354 TLCATLEVEAAIPLLKQSLAIYADNLIAHVHLAETYAVLGRFEEAAPHYEYALKLSEKNP 413
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
A +++K GQ + E L++ P D
Sbjct: 414 QLINALANIYVKTGQHDLAKEYFERALEIDPRFTD 448
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
++ P T L +L +++ QAI + + + P+ Y+ LG ++S+L +++ A
Sbjct: 441 EIDPRFTDALNNLGNLHHSHDRISQAIECYLKSIAIKPDSARAYSNLGNSYSSLKDYEKA 500
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
D Y A L P+ S + L T ++ A+Y +Q + EP + +L +
Sbjct: 501 IDAYKTAIRLDPQYSDAYYNLGTAQMEIKQFRDAIYSYKQVLEIEPDSVKAMNNLGVAHT 560
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+ ++++A E + ++ +++A + Q SI E+ L++ + + +
Sbjct: 561 ALNEFKQAEEIFSKVFSYETGHLEAYGNMGNVCCSNNQLEESIKWYEKALEIDAKNPE-T 619
Query: 208 VIDLLVAILMENNAYEKTLQHIE 230
+ +L + L + + +E+ +H E
Sbjct: 620 LWNLGLVYLRQGD-FEQGWKHYE 641
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 42 SLQYAYG---NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
+L A+G + QAI+ + + L P+ E Y LG++H+ALG + A Y A L+
Sbjct: 78 NLGIAFGAVRQYPQAIASYMQAIALKPDRAEAYYNLGVSHAALGQLEPATASYKEAIRLN 137
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P ++ L +G +A + ++ P D LA + +++A
Sbjct: 138 PAYIKAYRNLGVVLEAQGKHTEATAAYQSLLKFRPDDAEAHHQLAINFSTQKKFDEAIIH 197
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
Y + ++ P+ VDA A K + +I + + +++ P +A S+ + L I
Sbjct: 198 YSRAIEINPEFVDAYCNKAIALGKLNKLEDAILMYKAAIELVPDEA--SIYNNLGNIFSR 255
Query: 219 NNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+E+ L E+A +R + LK AG + L +E+A
Sbjct: 256 KRQFEEALSCFENA--IRL--QPTYLKAHCNAGNALIDLERVEEA 296
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G FE+A + ++LS P+ N L + G H A +++ A + P+ +
Sbjct: 393 GRFEEAAPHYEYALKLSEKNPQLINALANIYVKTGQHDLAKEYFERALEIDPRFTDALNN 452
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +QA+ ++I +P +L + Y + DYEKA ++Y+ +L P
Sbjct: 453 LGNLHHSHDRISQAIECYLKSIAIKPDSARAYSNLGNSYSSLKDYEKAIDAYKTAIRLDP 512
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
DA ++ Q +I ++ L++ P
Sbjct: 513 QYSDAYYNLGTAQMEIKQFRDAIYSYKQVLEIEP 546
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 6/216 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + A + + + P + N LG H + A + Y+ + + P + +
Sbjct: 427 GQHDLAKEYFERALEIDPRFTDALNNLGNLHHSHDRISQAIECYLKSIAIKPDSARAYSN 486
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L D +A+ + AIR +P+ +L + +EI + A SY+Q+ ++ P
Sbjct: 487 LGNSYSSLKDYEKAIDAYKTAIRLDPQYSDAYYNLGTAQMEIKQFRDAIYSYKQVLEIEP 546
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D+V A + ++ I + L + + NN E++++
Sbjct: 547 DSVKAMNNLGVAHTALNEFKQAEEIFSKVFSY--ETGHLEAYGNMGNVCCSNNQLEESIK 604
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
E A + E L G+ YLR G+ E+
Sbjct: 605 WYEKALEIDAKNPETLWNL----GLVYLRQGDFEQG 636
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
+P +LG +Q ++ + I ++++ + +P + + LG+A A+ + A
Sbjct: 38 NPDALHLLGVTYMQSR--DYARCIPVIQKALEYNPRHADAHYNLGIAFGAVRQYPQAIAS 95
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y+ A L P + + L G A ++AIR P I +L G
Sbjct: 96 YMQAIALKPDRAEAYYNLGVSHAALGQLEPATASYKEAIRLNPAYIKAYRNLGVVLEAQG 155
Query: 151 DYEKAAESYEQIQKLFPDNVDA 172
+ +A +Y+ + K PD+ +A
Sbjct: 156 KHTEATAAYQSLLKFRPDDAEA 177
>gi|321454458|gb|EFX65628.1| hypothetical protein DAPPUDRAFT_117104 [Daphnia pulex]
Length = 409
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 8 GYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNL 67
G + T + K++ R + +L + ++GEA+L+YA G E AI+L KEV+R +P+
Sbjct: 139 GNQPPTSPVKKRKCTR--ATKRLPAHLQGLIGEANLRYARGENEDAINLCKEVIRQAPSY 196
Query: 68 PETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
E + L + + +++ ++ +IA +LSP+D+
Sbjct: 197 AEPFQALSMFYENQEDYEKSYQLSLIAEYLSPQDA 231
>gi|428218616|ref|YP_007103081.1| glycosyl transferase family protein [Pseudanabaena sp. PCC 7367]
gi|427990398|gb|AFY70653.1| glycosyl transferase family 9 [Pseudanabaena sp. PCC 7367]
Length = 2670
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG A ++ G E AI+ + + ++PNL E Y+ LG AHS L +A +FY A
Sbjct: 281 LGAAQMRQ--GEPETAIANYHKALAINPNLAEAYHNLGEAHSQLYQFTTATEFYQRAIQT 338
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P + L T +++ QA+ RQAI +P ++ L+ +++G++ +
Sbjct: 339 KPNYVSAHNALATVYLKQAQPDQAIAAYRQAIALQPDYVNAHFGLSMALLQLGNFTEGLV 398
Query: 158 SYEQIQKL 165
YE Q+L
Sbjct: 399 EYEWRQRL 406
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 124/326 (38%), Gaps = 20/326 (6%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F AI+ + V++L P+ E + LGLA+ +G A Y A ++P + L
Sbjct: 87 FGLAIASYERVIQLQPDHKEAHYYLGLAYRQVGRLTEAIASYERAIAINPDRIEIQVALG 146
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G QA R AI P L ++AA SYE+ +L P+
Sbjct: 147 NAQLSAGQLDQAEQSYRAAIELNPNLAEAHNGLGGVMSNRDLLDQAASSYERAIELMPNY 206
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
DA + ++ ++ L+ +P+ A ++ L+A +N I
Sbjct: 207 ADAYANLGMTQFRQKNLLEALANCQQALQHNPNHASTYMVLGLIAAEQDNLGLA-----I 261
Query: 230 EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTL 289
H Q K + L C L M + E A + A+ + +A+
Sbjct: 262 AHYQ------KAIALNPNYANAYCNLGAAQMRQGEPETAIANYHKAL---AINPNLAEAY 312
Query: 290 MSLGHSNSALKYY----HFLETNAGTDNGYL--YLKLAECYLSLKERAHAIMFFYKALDR 343
+LG ++S L + F + T Y+ + LA YL + AI + +A+
Sbjct: 313 HNLGEAHSQLYQFTTATEFYQRAIQTKPNYVSAHNALATVYLKQAQPDQAIAAYRQAIAL 372
Query: 344 FEDNIDARLTLASLLLEEAKEEEAIT 369
D ++A L+ LL+ E +
Sbjct: 373 QPDYVNAHFGLSMALLQLGNFTEGLV 398
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 70/158 (44%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
Q+ N +A++ ++ ++ +PN TY LGL + N A Y A L+P +
Sbjct: 217 QFRQKNLLEALANCQQALQHNPNHASTYMVLGLIAAEQDNLGLAIAHYQKAIALNPNYAN 276
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ L +++G+ A+ +A+ P +L + ++ + A E Y++
Sbjct: 277 AYCNLGAAQMRQGEPETAIANYHKALAINPNLAEAYHNLGEAHSQLYQFTTATEFYQRAI 336
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ P+ V A A ++LK Q ++I + + + P
Sbjct: 337 QTKPNYVSAHNALATVYLKQAQPDQAIAAYRQAIALQP 374
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
+P + +L A + AI+L ++ + P E LG+A +G + A +
Sbjct: 965 TPELAALLKNAIANHQADQINAAIALYRQFLNQQPEHIEANYLLGVALGQIGEQEQAIEQ 1024
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y + +P + L Q+G AQA+ Y +AI +P + HL G
Sbjct: 1025 YQRVLNQNPNHAQALNHLGVIHKQQGQLAQAIDYYERAIAIQPDYVEALYHLGLALTAQG 1084
Query: 151 DYEKAAESYEQ 161
+ A E +++
Sbjct: 1085 KWTAAIEQHQR 1095
>gi|499647|gb|AAB59705.1| unknown [Mus musculus]
Length = 824
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 570 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 629
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 630 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 689
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 690 CLRFLVRLCTDIG 702
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 34/195 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV------------ 92
+A G++E+A KE +R + E +GL + L A D ++
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSFLKLHAILRNSAQV 554
Query: 93 ---IA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
IA + P DS +L +GD +QA Y ++ R
Sbjct: 555 LCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDAD 205
+E + P + +
Sbjct: 675 DTYKEIHRKFPENVE 689
>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 379
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A+ +V++L+P + +N GL + LG + + + Y A ++PK + W
Sbjct: 202 YEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKG 261
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G +A+ +A+ +P+D + E+G Y+ A E +++ ++ P+
Sbjct: 262 VVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEINPEF 321
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
DA K + + S+ ++ LK++P + V
Sbjct: 322 ADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNTMV 360
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 64/146 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++++ ++ ++++P L E +N G+ S LG ++ A + Y A + P+D W
Sbjct: 234 GRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNN 293
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G A+ ++A+ P+ ++ E++ + Y++ KL P
Sbjct: 294 KGLVLEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNP 353
Query: 168 DNVDATKTGAQLFLKCGQTARSIGIL 193
+ + K QT RS +L
Sbjct: 354 PKQNTMVHARKNTTKTRQTQRSTKML 379
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+A+ +++++ +P L E +N GL LG + A + Y A ++PK + W
Sbjct: 67 EKALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKAL 126
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ G +A+ +A++ PK + S + + Y+KA + +E+ +L P N
Sbjct: 127 VLKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNY 186
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
A T G T ++ I EE LK + L+ D
Sbjct: 187 RAWGTK-------GITLHNLKIYEEALKCYDKVLQLNPQD 219
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 64/149 (42%)
Query: 57 LKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG 116
++ + L+P + T G+ L ++ A Y L+P+D W + G
Sbjct: 175 FEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELG 234
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
+++ +A++ PK + E+G YE+A E YE+ ++ P++
Sbjct: 235 RYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNK 294
Query: 177 AQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ + G+ ++ ++ L+++P AD
Sbjct: 295 GLVLEELGKYKDALECFQKALEINPEFAD 323
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G +SL+ G +++A+ ++ ++ PN PE + + L + A + Y +
Sbjct: 23 GRSSLKQ--GKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKILKNN 80
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
PK + W + G +A+ +A++ PK + A E+G Y++A E
Sbjct: 81 PKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALEC 140
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
YE+ ++ P DA + + + +++ E+ ++++P +
Sbjct: 141 YEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKN 185
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/190 (17%), Positives = 76/190 (40%), Gaps = 34/190 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++A+ ++ ++++P +N L LG + A + Y A ++PK + W
Sbjct: 98 GRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALECYEKALQINPKLADAWYN 157
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDI-----------SLRIHLASF----------- 145
+ + +A+ +AI PK+ +L+I+ +
Sbjct: 158 KGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNP 217
Query: 146 ------------YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
+ E+G Y+++ E YE+ ++ P +A + + G+ ++
Sbjct: 218 QDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECY 277
Query: 194 EEYLKVHPSD 203
E+ L++ P D
Sbjct: 278 EKALEIDPED 287
>gi|431793992|ref|YP_007220897.1| Flp pilus assembly protein TadD [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784218|gb|AGA69501.1| Flp pilus assembly protein TadD [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 383
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+++ A L + +R +P ET LG +S G + A + L P +S W+
Sbjct: 130 GDWQGAADALSKAIRTNPKKAETIYRLGTIYSLHGENHEALCCFQGCCELKPHNSLYWEM 189
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+Q G +QA++ +A+R + L+ LA Y+++ +++K Y Q+ K P
Sbjct: 190 KGETHLQLGQMSQAIFSFEKALRYDYYP-DLKARLAYCYIQVNEHKKGIRLYRQVLKHDP 248
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE---- 223
+ D+ A ++ GQ+ ++ + E + +D +L+ N AY
Sbjct: 249 AHYDSLCNLAAVYQNLGQSLEALLLQERAHSLCQND----------PVLLNNMAYTLVQL 298
Query: 224 -KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA-EIL 266
+T + E+ Q + + L +CY + GN E EIL
Sbjct: 299 GRTRKATEYYQEALHLAQANAVIL-YNLAVCYAQKGNWEGGIEIL 342
>gi|341940821|sp|Q61371.2|IFT88_MOUSE RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
Full=Recessive polycystic kidney disease protein Tg737;
AltName: Full=Tetratricopeptide repeat protein 10;
Short=TPR repeat protein 10; AltName:
Full=TgN(Imorpk)737Rpw
Length = 824
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 570 QAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 629
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y++I + FP+NV+
Sbjct: 630 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVE 689
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 690 CLRFLVRLCTDIG 702
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 34/195 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV------------ 92
+A G++E+A KE +R + E +GL + L A D ++
Sbjct: 495 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSFLKLHAILRNSAQV 554
Query: 93 ---IA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
IA + P DS +L +GD +QA Y ++ R
Sbjct: 555 LCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYR 614
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ EKA + +E+ + P V A F + G +++
Sbjct: 615 YFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 674
Query: 191 GILEEYLKVHPSDAD 205
+E + P + +
Sbjct: 675 DTYKEIHRKFPENVE 689
>gi|428319715|ref|YP_007117597.1| glycosyl transferase family 2 [Oscillatoria nigro-viridis PCC 7112]
gi|428243395|gb|AFZ09181.1| glycosyl transferase family 2 [Oscillatoria nigro-viridis PCC 7112]
Length = 1533
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ ++ +++ PN Y TLG A A + A +Y A + P + ++
Sbjct: 25 GKIEEAIASCEQALKIHPNFAPAYKTLGNALQAQARMEEARHWYAKAIEIEPNFAEVYAN 84
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + Q+ +A+ + ++AI +P + +LA + +IG E+A + + Q L P
Sbjct: 85 LGSLGAQQQKWQEAIGFYQKAIAIKPNFAGVYRNLAKVFGQIGKPEEAQQCWYQAFSLEP 144
Query: 168 DNVDATK--TGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ V + F + + A +I + +K++P+ A
Sbjct: 145 EKVAPGEHLNMGDAFFRQEKFAEAIACYDRAIKLNPNVA 183
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 144/376 (38%), Gaps = 60/376 (15%)
Query: 8 GYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISL---------LK 58
Y +K +LN R + G T G Q A +QA+ ++
Sbjct: 204 AYYRKAIELNAANARNGSEGQQTLAGATATNGAVKQQPAATAVQQAVKPPVQQAVKPPVQ 263
Query: 59 EVVRLSPNL--PETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG 116
+ V + N+ PE Y L + A G + A A + P ++ L+K +L A+Q G
Sbjct: 264 QPVNSTINIEDPEAYKILAEGYFAQGKLEQAIAACKKALQIKP-EAPLYK-MLGNALQAG 321
Query: 117 ---DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
D A++ Y +AI P + S + +++A +YE+ L PD A
Sbjct: 322 GKIDEAKSCYV--KAIEINPNFAEAYANYGSICAQQEQWQQAVSAYEKAIALKPDFAGAF 379
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQ 233
+ A+L + G++ + + P + L L+E +K ++ A
Sbjct: 380 RNFAKLLTQLGKSEEAAEAWYRAFAIDPKSCTAEEHENLAKTLIEQGKVDKGIECYRRA- 438
Query: 234 IVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID-HADLITEVADTLMSL 292
++L AG Y LG EIL QW+ A+D + + I + +S
Sbjct: 439 ----------VELNPNAGAAYHELG-----EILKGQEQWEAAVDAYTNAIRNNPN--LSW 481
Query: 293 GHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARL 352
H+N LAE + L+ A+ + KA++ D +
Sbjct: 482 SHNN-----------------------LAESLVKLERWEEAVNAYRKAIELNPDFSWSHN 518
Query: 353 TLASLLLEEAKEEEAI 368
LA +LL+ + EEA+
Sbjct: 519 NLADVLLKLERWEEAV 534
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++ I + V L+PN Y+ LG ++A D Y A +P S
Sbjct: 426 GKVDKGIECYRRAVELNPNAGAAYHELGEILKGQEQWEAAVDAYTNAIRNNPNLSWSHNN 485
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L V+ +A+ R+AI P +LA +++ +E+A ESY + +L P
Sbjct: 486 LAESLVKLERWEEAVNAYRKAIELNPDFSWSHNNLADVLLKLERWEEAVESYRKATELNP 545
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D + A +K G+ +I + ++++P
Sbjct: 546 DFSWSHNYLADALIKLGRWDEAISAYQRSIELNP 579
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGE--ASLQYAYGNFEQAISLLKE 59
E++ G + K ++ G+ + +PG+ E ASLQ G F +A++ ++
Sbjct: 776 EVLKKKGVSRGAEKSDRAVHGNSGNAIEHTPGIAAEYHELGASLQEE-GKFAEAVAAYRK 834
Query: 60 VVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTA 119
+ ++PN T++ LG +G + Y AA L+P L Q+G
Sbjct: 835 AISINPNYFGTHHNLGDVLKWIGKVDESIKSYHKAAELNPNFVWSHHNLADVYQQEGRLD 894
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+A+ R+AI P +LA + +A E+Y+ KL P
Sbjct: 895 EAVAAYRKAIEVAPDFGWSYYNLAKTLAKQDKLSEALEAYQTASKLDP 942
>gi|389584715|dbj|GAB67447.1| hypothetical protein PCYB_114670 [Plasmodium cynomolgi strain B]
Length = 1898
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 29 KLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS-ALGNHKSA 87
K++ V ++ +A+ Y NFE+ I++L++V++L+P+L + ++ LGL H + K A
Sbjct: 523 KMNKEVESLMNKANSCYISQNFEECITILEKVIKLAPSLHDPFHLLGLIHEREYKSVKKA 582
Query: 88 FDFYVIAAHLSPKDSALWKQLL 109
++Y+IAAHLS D W ++
Sbjct: 583 INYYLIAAHLSRNDYLSWYNIV 604
>gi|300120009|emb|CBK19563.2| unnamed protein product [Blastocystis hominis]
Length = 243
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
K +KL V ++ EA Y ++++A LL EV + P P+ YN LGL + A N
Sbjct: 40 KPRVSKLPDQVQRIYDEAMRCYINLDYDKAKLLLSEVTKNVPEYPDIYNVLGLIYEAEQN 99
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKD 135
A D Y I A + KD A W+ + +V+ + +Y + + I +P +
Sbjct: 100 ITKACDCYFIEAEIVKKDPAKWEVVYEMSVKLNLHKRQIYCLSRIIHLDPSN 151
>gi|218961281|ref|YP_001741056.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167729938|emb|CAO80850.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans str. Evry]
Length = 361
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 17/217 (7%)
Query: 18 KKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLA 77
KKR R ++ L+ G K EA GN ++A+ + + +L P PE + L
Sbjct: 120 KKRKERAWTRIFLAAGKEK---EA------GNTQRAMEIYELAHKLEPERPEP--MIQLK 168
Query: 78 HSALGNHKSAFDFYVIAAHLSPKDSALWKQLL---TFAVQKGDTAQAMYYIRQAIRAEPK 134
+ L + K I L KD + L+ TF KG+ A+A+ Y +A P
Sbjct: 169 NIYLVDLKDDVKAEQILQQLLQKDPDKLEYLMEMGTFYYNKGNYAEAVKYFEKARPQIPT 228
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+I +++++ Y E+ DYEKA + + ++ P+NVD + + ++I L+
Sbjct: 229 NIDNLMNISACYYELKDYEKAMSATKTALEIEPNNVDLLDNARSIAAQLNDIDQAIFYLK 288
Query: 195 EYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
+ L + P++ D S LL L +++ +++ E
Sbjct: 289 KLLDIRPNEDDFS---LLATYLYNKQNWQELIKYAEQ 322
>gi|345865029|ref|ZP_08817222.1| TPR repeat-containing protein [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345123851|gb|EGW53738.1| TPR repeat-containing protein [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 933
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
S+ +A N+EQA + L + V PN + LG+ L H+SA + A +
Sbjct: 318 GSVHFARQNYEQANAYLSQYVNKVPNHLQARKLLGMTRLKLNQHESALEALEPALDNAGG 377
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D + K + A + GD Y+ QA++A+P + ++R LA Y+ G ++A E E
Sbjct: 378 DVEILKLIGNAASRSGDHLSGTRYLEQAVKADPGNSAIREELAKAYLRKGSIDQAIEELE 437
Query: 161 QI 162
+
Sbjct: 438 TL 439
>gi|406938782|gb|EKD71939.1| tetratricopeptide repeat family protein [uncultured bacterium]
Length = 528
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L P DS L L +GD A A + Q I + P + + +L + + ++
Sbjct: 62 AIKLQPNDSTLKLHLANIKKSQGDLAAASDVLSQLIESHPTFAAAQNNLGTVFYLQNKWQ 121
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
+A +Y+ + PD +DA A K + + + E L + P+
Sbjct: 122 EAINAYQAAIDIQPDYLDAYYNLALTLRKANRLKEASHVYEALLSLAPNHPGAHF--QYG 179
Query: 214 AILMENNAYEKTLQHIEHAQIVRFSGKELP--LKLKVKAGICYLRLGNMEKAEILFADLQ 271
+LM N + K ++H F K P + +V CYL++GN+ KA+ L
Sbjct: 180 CLLMTNKNFPKAIEHF------LFLDKMFPHHFETQVNLATCYLQMGNIFKAK-----LH 228
Query: 272 WKNAIDHADLITEVADTLMSLG----HSN---SALKYYHFLETNAGTDNGYLYLKLAECY 324
++ A+ L A L +LG H N A+ YYH +DN L Y
Sbjct: 229 YQKAL---ALSANDAQVLFNLGVIATHENRVHEAIDYYH-RAICLHSDNFAAQQNLGSAY 284
Query: 325 LSLKERAHAIMFFYKAL 341
L + +R +A++ + +AL
Sbjct: 285 LMINDRKNALIHYREAL 301
>gi|345877427|ref|ZP_08829175.1| periplasmic sensor signal transduction histidine Kinase
[endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344225549|gb|EGV51904.1| periplasmic sensor signal transduction histidine Kinase
[endosymbiont of Riftia pachyptila (vent Ph05)]
Length = 933
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
S+ +A N+EQA + L + V PN + LG+ L H+SA + A +
Sbjct: 318 GSVHFARQNYEQANAYLSQYVNKVPNHLQARKLLGMTRLKLNQHESALEALEPALDNAGG 377
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D + K + A + GD Y+ QA++A+P + ++R LA Y+ G ++A E E
Sbjct: 378 DVEILKLIGNAASRSGDHLSGTRYLEQAVKADPGNSAIREELAKAYLRKGSIDQAIEELE 437
Query: 161 QI 162
+
Sbjct: 438 TL 439
>gi|327399475|ref|YP_004340344.1| hypothetical protein Hipma_1328 [Hippea maritima DSM 10411]
gi|327182104|gb|AEA34285.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima
DSM 10411]
Length = 260
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 41 ASLQYAYGNFEQAISLLKEVV-RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
A + + +G FE I L E++ RL Y +G A+ LG + A +FY +A + P
Sbjct: 80 AMIYHKFGFFEDEIEALNEIIIRLDEPDASIYLNIGNAYYELGENDRAIEFYDMAIGMEP 139
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
+ + + + K + +A +QA++ +P + ++L Y E+G Y++A + +
Sbjct: 140 DFAEAYANMGNAYMAKDEYIKATEAYKQALQIDPNMSDVYLNLGIVYGELGSYDEAVKYF 199
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLL 212
EQ ++ P N A +++ + +++ E LK D LS++ L+
Sbjct: 200 EQSIRINPYNPSAHYNLGIIWVMLNEKEKALNEYER-LKNLNKDLALSLVQLI 251
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P + L + Y G ++AI + + P+ E Y +G A+ A + A + Y
Sbjct: 106 PDASIYLNIGNAYYELGENDRAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAY 165
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A + P S ++ L + G +A+ Y Q+IR P + S +L +V + +
Sbjct: 166 KQALQIDPNMSDVYLNLGIVYGELGSYDEAVKYFEQSIRINPYNPSAHYNLGIIWVMLNE 225
Query: 152 YEKAAESYEQIQKLFPD 168
EKA YE+++ L D
Sbjct: 226 KEKALNEYERLKNLNKD 242
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAAHLSPKDSALWKQ 107
NF+ A + + ++PN E YNTL + + G + + I L D++++
Sbjct: 54 NFDDAEDYCNKAIEINPNNLEAYNTLAMIYHKFGFFEDEIEALNEIIIRLDEPDASIYLN 113
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + G+ +A+ + AI EP ++ + Y+ +Y KA E+Y+Q ++ P
Sbjct: 114 IGNAYYELGENDRAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAYKQALQIDP 173
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ D ++ + G ++ E+ ++++P
Sbjct: 174 NMSDVYLNLGIVYGELGSYDEAVKYFEQSIRINP 207
>gi|367012425|ref|XP_003680713.1| hypothetical protein TDEL_0C06130 [Torulaspora delbrueckii]
gi|359748372|emb|CCE91502.1| hypothetical protein TDEL_0C06130 [Torulaspora delbrueckii]
Length = 1025
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 24 KGSKNK-LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
K S+ + L P V+++L EA+ + + + A L EV++ Y TLG + G
Sbjct: 109 KASRQRVLDPEVSQLLSEANEAFVRNDLQVAERLYNEVIKKDARNFAAYETLGEIYQLQG 168
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
+ + +AAHL+ D + WK + + G QA+Y + I ++
Sbjct: 169 RLNDCCNSWFLAAHLNSSDWSFWKIVAILSADLGHIRQAIYCYSRVINMNHEEWECVYRR 228
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ Y E+G +A E ++++ P + + + A L+++ + ++ I Y+K+
Sbjct: 229 SLLYKEVGQIGRALEGFQRLHAHNPLDGNILRDLAVLYVEYNRINDAVDI---YMKIFED 285
Query: 203 DAD 205
+ +
Sbjct: 286 NVE 288
>gi|390441071|ref|ZP_10229255.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis sp. T1-4]
gi|389835636|emb|CCI33381.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis sp. T1-4]
Length = 248
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 71/158 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ + + P+ PE + G+A + LG A + A + P D W
Sbjct: 33 GRLEEALASFDRALEIKPDDPEAWYNRGVALADLGRFAEALASFDKALEIKPDDHQAWYN 92
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G A+A+ +A+ +P D + S ++G +E+A SY++ ++ P
Sbjct: 93 RGVALADLGRFAEALASFDKALEIKPDDHQAWYNRGSALDDLGRFEEAIASYDRALEIKP 152
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
D+ A + G+ ++ + +K++P+DA+
Sbjct: 153 DDPYAWDNRGYVLTCMGRYKDALESCDRAIKINPNDAN 190
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 62/153 (40%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+ + P++ E + G+A LG + A + A + P D W
Sbjct: 2 EEAIASYDRALEFKPDVHEAWYNRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRGV 61
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
G A+A+ +A+ +P D + ++G + +A S+++ ++ PD+
Sbjct: 62 ALADLGRFAEALASFDKALEIKPDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDDH 121
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
A G+ +I + L++ P D
Sbjct: 122 QAWYNRGSALDDLGRFEEAIASYDRALEIKPDD 154
>gi|387793347|ref|YP_006258412.1| cytochrome c biogenesis factor [Solitalea canadensis DSM 3403]
gi|379656180|gb|AFD09236.1| cytochrome c biogenesis factor [Solitalea canadensis DSM 3403]
Length = 469
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
+AI++ ++ ETY +G + L A FY A L + S W +
Sbjct: 257 EAINVYRQTFEYEQPDAETYCCMGECYEKLEMMDEARSFYKKAVKLDARLSEGWFGIGVT 316
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +++++ ++A+ + + L + ++G+ E+A E+YE++ +L PD+++
Sbjct: 317 LDFEERWFESLHFYKKALELDASNPEYWFALGDSHSKLGNVEEAEEAYEKVMELAPDDIE 376
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEH 231
+ L + G+ +I I+ E +K + A+L +VA L N Y++ + ++E
Sbjct: 377 IWLDYSSLMFEEGKNEEAIAIISEGIKNNTGAAELYY--RMVAYLFANGQYKEAISYLEQ 434
Query: 232 AQI 234
A I
Sbjct: 435 ALI 437
>gi|166364168|ref|YP_001656441.1| hypothetical protein MAE_14270 [Microcystis aeruginosa NIES-843]
gi|425441843|ref|ZP_18822110.1| Periplasmic protein [Microcystis aeruginosa PCC 9717]
gi|425467052|ref|ZP_18846336.1| Periplasmic protein [Microcystis aeruginosa PCC 9809]
gi|166086541|dbj|BAG01249.1| periplasmic protein [Microcystis aeruginosa NIES-843]
gi|389717354|emb|CCH98553.1| Periplasmic protein [Microcystis aeruginosa PCC 9717]
gi|389830279|emb|CCI27894.1| Periplasmic protein [Microcystis aeruginosa PCC 9809]
Length = 363
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ + L N + ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVKNGNYGEAIAIYERAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYDNAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ + L P+N A + + ++ +++ ++ L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWVLALDPNNQQAHEIMGKALIEQNKSSEALDFLQKSLQRFPNNSE 211
>gi|118085018|ref|XP_417145.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Gallus gallus]
Length = 821
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P P LG + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDPHVLTKLGKLYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A P + ++ +AS Y G+Y+KA E Y+ I + FP+NV+
Sbjct: 631 CIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEKYKVIHQKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDMG 703
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 91/240 (37%), Gaps = 46/240 (19%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S ++ +P + + + +A G++E+A KE +R + E LGL + L
Sbjct: 479 SSDRYNPAA--LTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRID 536
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A D ++ + + + Q+ D QA+ ++ Q I P D + L
Sbjct: 537 EALDCFLKLHAILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPTDPHVLTKLGKL 596
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y GD +A Y + + FP N++
Sbjct: 597 YDNEGDKSQAFHYYYESYRYFPSNIE---------------------------------- 622
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLK--VKAGICYLRLGNMEKA 263
VI+ L A ++ EK +++ E A ++ LP ++K + CY R GN +KA
Sbjct: 623 --VIEWLGAYCIDTQFCEKAIEYFERAALI------LPTQVKWQLMVASCYRRSGNYQKA 674
>gi|427708402|ref|YP_007050779.1| hypothetical protein Nos7107_3038 [Nostoc sp. PCC 7107]
gi|427360907|gb|AFY43629.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 237
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ QAI+LL E++R P YN GL + G + AF Y A L+P ++ +
Sbjct: 56 GDYNQAIALLNELIRRYPQNAADYNNRGLIYFQSGEKQKAFCDYNTALDLNPNLASAYNN 115
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ G+ A A+ QAI P+ + I+ + ++G YE+A E+ E
Sbjct: 116 RANYYAACGELAAALADYDQAIDLNPRYVRAWINRGITFRDLGQYEEAIENLE 168
>gi|339448324|ref|ZP_08651880.1| TPR repeat-containing protein [Lactobacillus fructivorans KCTC
3543]
Length = 421
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
++P V G LQ ++ +AI +LK++ P Y LG A+ + ++A
Sbjct: 202 MTPDVKFETGFTYLQLK--DYAKAIEMLKQLREDDPQYASLYPYLGEAYIEMNEPENALK 259
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
Y + + ++ Q A + + A+ Y+++ + +P ++ L I L++ YV+
Sbjct: 260 VYQEGMSVDQYNVNMYIQAADVAAKLSEEDLALKYLKEGHKVDPDNMELIIKLSNLYVKQ 319
Query: 150 GDYEKAA---------------------------ESYEQIQKL-------FPDNVDATKT 175
G+Y+K E Y++ QK F DN D
Sbjct: 320 GEYQKNVDFLAQYVKNEETDPQIYWNLAVSYAHLEKYDEAQKYYQRALPYFDDNPDFLHE 379
Query: 176 GAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
LF + GQ +I +L+ Y+K+ P+D +++ +
Sbjct: 380 AILLFRENGQIKETIKLLKRYVKLVPTDDEMAYM 413
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRL------SPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
A L ++ G F++AI + +++ S NL E LG+A++ G+ + A +
Sbjct: 141 AELYFSTGQFDKAIPIYLGLIKQGELNISSVNLVER---LGVAYANAGHFEQAIGYLEQI 197
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
+ ++ T+ +Q D A+A+ ++Q +P+ SL +L Y+E+ + E
Sbjct: 198 KPIDMTPDVKFETGFTY-LQLKDYAKAIEMLKQLREDDPQYASLYPYLGEAYIEMNEPEN 256
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
A + Y++ + NV+ A + K + ++ L+E KV P + +L + L
Sbjct: 257 ALKVYQEGMSVDQYNVNMYIQAADVAAKLSEEDLALKYLKEGHKVDPDNMELII--KLSN 314
Query: 215 ILMENNAYEKTLQHIEHAQIVR 236
+ ++ Y+K + + AQ V+
Sbjct: 315 LYVKQGEYQKNVDFL--AQYVK 334
>gi|296487347|tpg|DAA29460.1| TPA: transmembrane and tetratricopeptide repeat containing 1-like
[Bos taurus]
Length = 939
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y+ P S L
Sbjct: 622 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYLAGIKKCPDSSDLHNNYGV 681
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +GD A E Y++ ++
Sbjct: 682 FLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKTE 741
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ E + + PS +L + + ++A++ + EK HI
Sbjct: 742 ILSPLGA-LYYNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSHI 800
>gi|149048929|gb|EDM01383.1| rCG29705 [Rattus norvegicus]
Length = 519
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 202 EEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNNYAV 261
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L + +G+ A E Y + ++
Sbjct: 262 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAE 321
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS DL + + ++A++ + EK HI
Sbjct: 322 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHI 380
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ ++ ++LSP+ LG H +LG + A ++Y A ++ + + +
Sbjct: 267 GFPEKAVAHYQQAIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVA-RTAEVLSP 325
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G +A+ R+A+ +P LR+ LA +G ++A + I P
Sbjct: 326 LGALYYNTGRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEP 385
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
++ + + ++ K +++ +E+ L++ P D
Sbjct: 386 RCLECYRLLSAIYSKQEHHEKALEAIEKALQLKPKD 421
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 33 GVTKMLGEASLQYAYGNF-------EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
GV + A + Y Y NF ++AI K ++L P N LG + K
Sbjct: 112 GVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYKTALKLYPRHASALNNLGTLTKDMAEAK 171
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+Y A L P+ + L + T +A+ ++++I+ P LAS
Sbjct: 172 M---YYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAYSSLASL 228
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E +++A + Y+ K PD+ D A + G +++ ++ +++ PS
Sbjct: 229 LAEQERFKEAEDVYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSH-H 287
Query: 206 LSVIDL--LVAILMENNA----YEKTLQHIEHAQIV 235
++V++L L L EN+ Y + LQ A+++
Sbjct: 288 VAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVL 323
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 13/160 (8%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
+ LGE S+ + + +A+ + + LSP YNT G HK A + Y A
Sbjct: 298 RSLGENSMAEEW--YRRALQVARTAEVLSPLGALYYNT--------GRHKEALEVYREAV 347
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P L L G T +A + EP+ + L++ Y + +EKA
Sbjct: 348 SLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRLLSAIYSKQEHHEKA 407
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
E+ E+ +L P + K ++LF G R +L++
Sbjct: 408 LEAIEKALQLKPKD---PKVISELFFTKGNQLREQNLLDK 444
>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1022
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + ++L PN YN G A G + A Y A L PK + +
Sbjct: 142 GEYDRAIADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTN 201
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA++ +PK I + + +G+Y++A Y + +L P
Sbjct: 202 RGDVFRSKGEYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEP 261
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
V A A F G+ R+I ++ L ++P+
Sbjct: 262 KYVIAVVNRADAFRIKGEYDRAIVDYDQALHLNPN 296
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G++E+AI+ ++L P P YN G A G + A Y A L P +
Sbjct: 105 YHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIADYNQALQLDPNYTFA 164
Query: 105 WKQLLTFAVQ-KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ FA Q KG+ +A+ QA+R +PK + + G+Y +A Y Q
Sbjct: 165 YNN-RGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIADYNQAL 223
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ P + A F G+ R+I E L++ P
Sbjct: 224 QFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEP 261
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + AI+ + +RL+P+ YNT GLA G + A Y A L PK SA+
Sbjct: 346 GENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPK-SAIAYN 404
Query: 108 LLTFAVQ-KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
FA+Q KG+ +A+ QA++ PK + + G+Y++A Y+ +
Sbjct: 405 NRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFD 464
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
P A +F G+ R+I ++ ++++P
Sbjct: 465 PKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLNP 499
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ ++ +RL P YN G A + G + A Y A L+PK SA+
Sbjct: 380 GEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPK-SAITYT 438
Query: 108 LLTFAVQ-KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
F Q KG+ +A+ A++ +PK + + G+Y++A +Y+Q +L
Sbjct: 439 NRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLN 498
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
P V A G+ R+I ++ L+++P
Sbjct: 499 PKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNP 533
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +RL P L Y G + G + A Y A L P+ +
Sbjct: 40 GEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQALRLDPRSVIAYNN 99
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KGD +A+ +A++ +PK + + + G+Y++A Y Q +L P
Sbjct: 100 RGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIADYNQALQLDP 159
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ A F G+ R+I + L++ P
Sbjct: 160 NYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDP 193
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI + + L+PN YN GLA G + A Y A L PK +
Sbjct: 278 GEYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVN 337
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ A+ QA+R P + + G+Y++A YEQ +L P
Sbjct: 338 RGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDP 397
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ A G+ R+I + L+++P A
Sbjct: 398 KSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSA 434
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AIS E +RL P A G + A Y A HL+P + +
Sbjct: 244 GEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALHLNPNYAIAYNN 303
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA+R +PK + ++ + G+ + A Y Q +L P
Sbjct: 304 RGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALRLNP 363
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A T F G+ R+I E+ +++ P A
Sbjct: 364 SYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSA 400
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 71 YNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW-KQLLTFAVQKGDTAQAMYYIRQAI 129
YNT G + G + A Y A L PK +A + + TF KG+ +A+ QA+
Sbjct: 29 YNTRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFR-SKGEYDRAIADYNQAL 87
Query: 130 RAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARS 189
R +P+ + + + GDYE+A Y + +L P + F G+ R+
Sbjct: 88 RLDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRA 147
Query: 190 IGILEEYLKVHPS 202
I + L++ P+
Sbjct: 148 IADYNQALQLDPN 160
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +RL P + G A G + A Y A L+P S +
Sbjct: 312 GEYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNT 371
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI-GDYEKAAESYEQIQKLF 166
KG+ +A+ QAIR +PK ++ + F ++ G+Y++A Y Q +L
Sbjct: 372 RGLAFQNKGEYDRAIADYEQAIRLDPKS-AIAYNNRGFALQSKGEYDRAITDYNQALQLN 430
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
P + +F G+ R+I + L+ P
Sbjct: 431 PKSAITYTNRGFVFQSKGEYDRAIADYDLALQFDP 465
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 30 LSPGVTKMLGEASLQYAY-GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
L PG+ +++ GN + +IS L E +RL+P E Y G+ + A G A
Sbjct: 667 LKPGLANAYYHRGTVFSFKGNLDHSISDLSEAIRLNPKYAEAYQDRGITYQARGEPDRAL 726
Query: 89 DFYVIAAHLSPK 100
+ AA L P+
Sbjct: 727 ADFAEAARLKPE 738
>gi|422303469|ref|ZP_16390820.1| Periplasmic protein [Microcystis aeruginosa PCC 9806]
gi|389791548|emb|CCI12639.1| Periplasmic protein [Microcystis aeruginosa PCC 9806]
Length = 363
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ + L N + ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVRNGNYGEAIAVYERAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYDNAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ + L P+N A + + ++ +++ ++ L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWVLALDPNNQQAHEIMGKALIEQNKSSEALDFLQKSLQRFPNNSE 211
>gi|427703579|ref|YP_007046801.1| hypothetical protein Cyagr_2353 [Cyanobium gracile PCC 6307]
gi|427346747|gb|AFY29460.1| hypothetical protein Cyagr_2353 [Cyanobium gracile PCC 6307]
Length = 304
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E A L + VRL P P + L A + A A L P ++ +W
Sbjct: 63 GQAEDAARLAELTVRLLPQDPRGWVLLAEAELRSNQMEKAKVALARAKELDPNNAGIWFA 122
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ A++ G A+ +R+ + + K+ L + + +G+ ++A S+E+ L
Sbjct: 123 EGSLALRDGKPQDAIGLLRRGLELDSKNAGAYFDLGNAQILLGNTQEALGSFERASGLRK 182
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
D +A + + G+TA +IG + LK+ P A+ S+ L A L E E+
Sbjct: 183 DFWEAINNQGLVLYESGRTADAIGRWQRVLKIKPDIAETSLA--LAAALFERGPAERA 238
>gi|15679902|ref|NP_275211.1| hypothetical protein MTH68, partial [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 228
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+A+ +V++L+P + +N GL + LG + + + Y A ++PK + W
Sbjct: 51 YEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKG 110
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G +A+ +A+ +P+D + E+G Y+ A E +++ ++ P+
Sbjct: 111 VVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEINPEF 170
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
DA K + + S+ ++ LK++P + V
Sbjct: 171 ADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNTMV 209
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Query: 29 KLSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L+P K L + G +++++ ++ ++++P L E +N G+ S LG ++ A
Sbjct: 63 QLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEA 122
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ Y A + P+D W + G A+ ++A+ P+
Sbjct: 123 LECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEINPEFADAWKWKGIILE 182
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
++ E++ + Y++ KL P + + K QT RS +L
Sbjct: 183 DLKKPEESLKCYKKALKLNPPKQNTMVHARKNTTKTRQTQRSTKML 228
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 74/169 (43%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
LGE S+ +++A+ ++ + L+P + T G+ L ++ A Y
Sbjct: 4 WLGEGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQ 63
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L+P+D W + G +++ +A++ PK + E+G YE+A
Sbjct: 64 LNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEAL 123
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E YE+ ++ P++ + + G+ ++ ++ L+++P AD
Sbjct: 124 ECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEINPEFAD 172
>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
str. Fusaro]
gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
str. Fusaro]
Length = 397
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI + + L PN E ++ G+ +LG+++ A Y L P++ W
Sbjct: 200 GKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALKAYQKTVELDPENDDAWNN 259
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG-------DYEKAAESYE 160
+ G + + +AI+A K I + A + G +E+AAE+Y
Sbjct: 260 M-------GIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAETYR 312
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ +L P+ ++A + + + + A S+ I E+ LK++P AD
Sbjct: 313 KATQLDPEYLEAYSSLGFVLAQLRRFAESLEIYEQALKLNPEAAD 357
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 4/156 (2%)
Query: 34 VTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
V L E L + + GNF +A+ + + + P+ + N A +G + A FY
Sbjct: 49 VAAKLNEYGLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYE 108
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
A ++ +D +W + Q G +A+ +A+ P + A + GDY
Sbjct: 109 KAIKINAEDPDIWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDY 168
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
+ A E+YE K+ +N D + + GQ +
Sbjct: 169 KAAIEAYE---KVLEENSDYKEAWVGKGIALGQMGK 201
>gi|85086903|ref|XP_957781.1| hypothetical protein NCU00310 [Neurospora crassa OR74A]
gi|28918876|gb|EAA28545.1| predicted protein [Neurospora crassa OR74A]
Length = 1142
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI+++KE++R P P+ +N L L H LGN ++A + A L PKD+ W +
Sbjct: 181 YQEAINMVKEIIRQRPATPQAWNLLSLIHEELGNREAATMCLISGAWLIPKDARHWMNVA 240
Query: 110 TFAVQKGDT------------AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+ + D +A+ QA++A+ +++ R A +++G A
Sbjct: 241 LYCLYGVDMMDDTDPRRKLALERAVMCYSQALQADKQNVEARTGKADALMQLGQSHLALA 300
Query: 158 SYEQIQKLFPDNVDATKTGAQLFL 181
Y + K+ P N+ + A+ L
Sbjct: 301 QYLRALKVQPLNIRTVRNLAEAAL 324
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 236 RFS----GKELPLKLKVKAGICYLRLGNMEKAEILF------ADLQWKNAIDHADLITEV 285
RFS G+ LP+ L+ + + +++G++ +AE AD ++ D D + ++
Sbjct: 430 RFSPVQYGRALPVDLRARLYVFRMKMGDIYEAEKHLTSLDPSADTAVEDFYDFPDCLKDI 489
Query: 286 ADTLMSLGHSNSALKYYHFLE--TNAGTD---NGYLYLKLAECYLSLKERAHAIMFFYKA 340
+ L+ AL+++ E N D + + + L C+++L +++ A F A
Sbjct: 490 GNALLDNESPAKALQFFSLYEKIANQAGDISMDADILVSLGRCHMALGDKSAAEERFIAA 549
Query: 341 LDRFEDNIDARLTLASL---LLEEAKEEEAITLLSPPKDLDS 379
++ EDNI+AR+ LA++ + + EEA L+ +L++
Sbjct: 550 IEDDEDNIEARVCLANMYEHVSDREGREEAFLLVRDAMNLEA 591
>gi|354566788|ref|ZP_08985959.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353544447|gb|EHC13901.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 278
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI E +R++PN E YN G A++ALG A Y A L+PK + +
Sbjct: 139 GDVNGAILDYNEAIRIAPNYAEAYNNRGNAYAALGKRNEAIADYDQAIRLNPKYAVAYNN 198
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+GD +A+ QAIR P + + + IGD + A +Q K+F
Sbjct: 199 RGNARSVQGDKQRAINDFDQAIRLNPNFAAAYNNRGNTRAAIGDKQGAISDLQQAAKIF 257
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ E ++L+P E YN GL H LG+ + A Y A L + +
Sbjct: 71 GDPQGAIAAYTEAIKLNPQYAEAYNGRGLVHFDLGDKQKAIADYSQAIRLFLNYAEAYNN 130
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD A+ +AIR P + + Y +G +A Y+Q +L P
Sbjct: 131 RGNARASTGDVNGAILDYNEAIRIAPNYAEAYNNRGNAYAALGKRNEAIADYDQAIRLNP 190
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A G R+I ++ ++++P+
Sbjct: 191 KYAVAYNNRGNARSVQGDKQRAINDFDQAIRLNPN 225
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 1/172 (0%)
Query: 29 KLSPGVTKML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
KL+P + G + + G+ ++AI+ + +RL N E YN G A ++ G+ A
Sbjct: 85 KLNPQYAEAYNGRGLVHFDLGDKQKAIADYSQAIRLFLNYAEAYNNRGNARASTGDVNGA 144
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y A ++P + + G +A+ QAIR PK + +
Sbjct: 145 ILDYNEAIRIAPNYAEAYNNRGNAYAALGKRNEAIADYDQAIRLNPKYAVAYNNRGNARS 204
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
GD ++A ++Q +L P+ A G +I L++ K+
Sbjct: 205 VQGDKQRAINDFDQAIRLNPNFAAAYNNRGNTRAAIGDKQGAISDLQQAAKI 256
>gi|440907001|gb|ELR57199.1| Transmembrane and TPR repeat-containing protein 1, partial [Bos
grunniens mutus]
Length = 632
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y+ P S L
Sbjct: 315 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYLAGIKKCPDSSDLHNNYGV 374
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +GD A E Y++ ++
Sbjct: 375 FLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKTE 434
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ E + + PS +L + + ++A++ + EK HI
Sbjct: 435 ILSPLGA-LYYNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSHI 493
>gi|426225293|ref|XP_004006801.1| PREDICTED: transmembrane and TPR repeat-containing protein 1
isoform 2 [Ovis aries]
Length = 939
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y+ P S L
Sbjct: 622 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYLAGIKKCPDSSDLHNNYGV 681
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +GD A E Y++ ++
Sbjct: 682 FLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGDNNVAEEWYKRALQVARKTE 741
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ E + + PS +L + + ++A++ + EK HI
Sbjct: 742 ILSPLGA-LYYNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSHI 800
>gi|328953733|ref|YP_004371067.1| hypothetical protein Desac_2057 [Desulfobacca acetoxidans DSM
11109]
gi|328454057|gb|AEB09886.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 808
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 11/315 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E AI L+E +L P E Y S N + A +P L
Sbjct: 148 GKLEAAIEKLQEAKQLDPKKYEVYLIQAQMESNRKNLERAVAILEEGIKANPDSEELLLA 207
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
A + +A Y +A++ EP+ SL+ LA Y+ G +KA ++ Q L P
Sbjct: 208 RGRVADAQKQFPEAEKYFLEAVKLEPQKASLQSELARHYILAGQLDKAEQALHQQLGLEP 267
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD--ADLSVIDLLVAILMENNAYEKT 225
DN + + G+ +L+++ HP + A ++ D ++ E KT
Sbjct: 268 DNEKHAVALTKFLVGRGKVKEGEQVLKDFAAKHPDNNAARFALADFYLSRRQEGRGL-KT 326
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEV 285
LQ I SG L+ K + + + G + +AE L +++ +N D++
Sbjct: 327 LQEIVDRDPTGPSG----LQAKGRMAMVHASRGRVAEAEKLASEVLKENP---KDMVATR 379
Query: 286 ADTLMSLGHSNSALKYYHF-LETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRF 344
L++L + +F L T N L LA+ +L E A KAL+
Sbjct: 380 TMGLLALSKKDGLAAVNNFRLITQDQPQNPEARLLLAQAHLVNNELEQAKEQAKKALELK 439
Query: 345 EDNIDARLTLASLLL 359
D ++AR L L L
Sbjct: 440 ADYLEARRFLYGLYL 454
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
N++ A A SP+D + Q+GD QA+ Y+ QA P + +L+ HL
Sbjct: 700 NYQKALTLVSEALEESPEDPNILDTKGWILCQQGDFPQAVTYLEQATEIAPNNPALKYHL 759
Query: 143 ASFYVEIGDYEKAAESYEQIQKL---FPDNVDA 172
A ++GD EKA + E++ ++ FP+ A
Sbjct: 760 AYCLAKLGDKEKAIGTLEKLLEIKVKFPERAAA 792
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD-SALWKQLLT 110
QA+ +L++ + SPN P LG A A A ++P+ SAL +LL
Sbjct: 563 QAVEVLRQSLARSPNNPVILQMLGEIFLAQKKSDEAAQALEKAFTINPRQLSAL--RLLV 620
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRI-HLASFYVEIGDYEKAAESYEQI--QKLFP 167
A Q+ + +A +PK I A FY + DY KA+E Y ++ + LFP
Sbjct: 621 IAYQQNPDVDKVKMELEAKTNDPKAPPFYILAQAMFYERLKDYNKASEVYNRMIERNLFP 680
Query: 168 DNVDATKTGAQLFLKCGQTA----RSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ A A L Q+ +++ ++ E L+ P D + ++D IL + +
Sbjct: 681 --ILAKNNLAYLLANHLQSPENYQKALTLVSEALEESPEDPN--ILDTKGWILCQQGDFP 736
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ + ++E A + + LK C +LG+ EKA
Sbjct: 737 QAVTYLEQATEIAPNNP----ALKYHLAYCLAKLGDKEKA 772
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 8/185 (4%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH---KSAFDFYVIAAHLSPKDSALW 105
+++ AI ++ +R N + +N L L L K+ F + A L PK+ +
Sbjct: 458 DYDGAIQTIQGYLRY--NEKDLFNLLALGEVYLAKEDLAKARATFQKVIA-LDPKNPIGY 514
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+L +++ T QA+ +++QA+ +P I L + Y+E +A E Q
Sbjct: 515 FELARMELKQKQTDQAVKHLKQALEQDPNFIKGLQLLTAIYLEQDKPVQAVEVLRQSLAR 574
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P+N + ++FL ++ + LE+ ++P LS + LLV +N +K
Sbjct: 575 SPNNPVILQMLGEIFLAQKKSDEAAQALEKAFTINPR--QLSALRLLVIAYQQNPDVDKV 632
Query: 226 LQHIE 230
+E
Sbjct: 633 KMELE 637
>gi|326438126|gb|EGD83696.1| hypothetical protein PTSG_04301 [Salpingoeca sp. ATCC 50818]
Length = 615
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 2/202 (0%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+ + G +A++ RL P+ Y AH ++G AF A L K
Sbjct: 385 AACRLELGRTSEALTDFTTAQRLDDKNPDVYFHKAQAHISMGAAVMAFSDLQRAIKLGTK 444
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L +Q D A+ +++A+ P+ ++ +L Y +GD +KA E ++
Sbjct: 445 VYGPYVHLALLHLQTQDAKSAIDLMQEAVTKFPEVSTVHSYLGEIYSAVGDNDKAVECFD 504
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ L P N + +F++ G + I ++ + ++V DA S L I ++
Sbjct: 505 KAISLDPHNANPYVHKGLVFVQQGNMEQGIELIHKAIEV--DDACESAYARLAQIHVQRE 562
Query: 221 AYEKTLQHIEHAQIVRFSGKEL 242
YE+ L+ + A +G+EL
Sbjct: 563 EYEEALKCYDKAIAATHAGQEL 584
>gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2]
gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2]
Length = 357
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
SL G E+ I L + V + P L + Y +LG A+ LG+++ A ++ +P
Sbjct: 138 GSLLVEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPS 197
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D + + + A+ + + + +P +I L+ Y E+G EKA E E
Sbjct: 198 DKITYFMITEAYHEMNRKDLAVKALERLLEIDPDNIPALYQLSQLYRELGSEEKAREMEE 257
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+I P + A++ LK G+ + LE+ ++ P
Sbjct: 258 KIMNCKPKYPTELEPWARVMLKHGRYKEVVEELEKIVESSP 298
>gi|326434846|gb|EGD80416.1| hypothetical protein PTSG_11061 [Salpingoeca sp. ATCC 50818]
Length = 850
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 28 NKLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
N L P +++ A+L + +QA ++ L P+ P LG L +
Sbjct: 553 NLLVPDTPEVVAAIAALNEQLDDTDQACEWYNTLISLVPSDPNALAHLGDMFDRLDDKSQ 612
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
AF ++ P + ++ + +A+ + ++A+ +P ++ R+ +AS +
Sbjct: 613 AFQYHFEGFRYFPAEINTISWFGSYYIDSQYIQKAIQFFQRAVEIQPGEVKWRLMIASCH 672
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATK 174
+ G+Y++A E+Y++I LFP+N++ K
Sbjct: 673 RKTGNYQRALETYKRIHTLFPENIECLK 700
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 62/154 (40%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
E+A L +E + + + E LGL H LGN + A +++ L P + +
Sbjct: 508 LEEAQELYQEALAIDSSCSEALFNLGLVHRDLGNLEDALEYFHRVNLLVPDTPEVVAAIA 567
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
Q DT QA + I P D + HL + + D +A + + + + FP
Sbjct: 568 ALNEQLDDTDQACEWYNTLISLVPSDPNALAHLGDMFDRLDDKSQAFQYHFEGFRYFPAE 627
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
++ ++ ++I + +++ P +
Sbjct: 628 INTISWFGSYYIDSQYIQKAIQFFQRAVEIQPGE 661
>gi|443325293|ref|ZP_21053995.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442795094|gb|ELS04479.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 371
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+QA+ + + + + ++ +G + LGN+ A Y A L + + L
Sbjct: 66 FQQALYVYEYAALVEQENSKIFSGIGYIQALLGNYSEAAQAYQKAIALESDNPEFYYALG 125
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
GD QA QAIR P+++ + L + +Y++A ++Y +I L P+N
Sbjct: 126 YSLGNSGDNLQAASAYEQAIRLAPENVDNHVGLGVVLLRNQEYDRAIDTYYRIITLAPNN 185
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
A LK + +I L+E + P +A+L I L A L +N+ E LQ +
Sbjct: 186 QKAISIFYTALLKQERYQEAIAFLQEEIVKDPQNANLK-IQLATAFLNQNDV-ESGLQTL 243
Query: 230 EHA 232
+ A
Sbjct: 244 QKA 246
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 42 SLQYAYGNFE---QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
+L Y+ GN QA S ++ +RL+P + + LG+ + A D Y L+
Sbjct: 123 ALGYSLGNSGDNLQAASAYEQAIRLAPENVDNHVGLGVVLLRNQEYDRAIDTYYRIITLA 182
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P + T +++ +A+ ++++ I +P++ +L+I LA+ ++ D E ++
Sbjct: 183 PNNQKAISIFYTALLKQERYQEAIAFLQEEIVKDPQNANLKIQLATAFLNQNDVESGLQT 242
Query: 159 YEQIQKLFPDN 169
++ +L P N
Sbjct: 243 LQKAARLHPHN 253
>gi|386001044|ref|YP_005919343.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357209100|gb|AET63720.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 351
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++A++ L P+ + GLA S+LG ++ A + Y A + P D LW
Sbjct: 54 GEYQEAVASYDRATALDAYNPDIWYNRGLALSSLGRYEEALECYQRGAKIEPFDPDLWLG 113
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ +A + KD + +G E+A S + + P
Sbjct: 114 TGSALSSLGRYEEALESYNRAAEFDSKDPDAWNGRGTVLARLGRLEEALASTDTALAMDP 173
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
++ DA + + L+ G+ ++ + +++ P D DL
Sbjct: 174 EDADAWNSKGAILLQLGRPEEALACYDRAIEIDPEDPDL 212
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 55/130 (42%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG S + G +E+A+ P+ +N G + LG + A A +
Sbjct: 112 LGTGSALSSLGRYEEALESYNRAAEFDSKDPDAWNGRGTVLARLGRLEEALASTDTALAM 171
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P+D+ W +Q G +A+ +AI +P+D L + S ++G Y++A +
Sbjct: 172 DPEDADAWNSKGAILLQLGRPEEALACYDRAIEIDPEDPDLWNNRGSALHQLGRYQEAQD 231
Query: 158 SYEQIQKLFP 167
SY L P
Sbjct: 232 SYSWAIALDP 241
>gi|421144250|ref|ZP_15604166.1| O-linked GlcNAc transferase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395489351|gb|EJG10190.1| O-linked GlcNAc transferase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 815
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 136/334 (40%), Gaps = 32/334 (9%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
YG++ +A LLK ++ S N Y+ LG + G + A + Y A L+ D+ ++
Sbjct: 175 YGHYTEAEELLKNMINKSKNDEWLYSELGYCLAEQGRQEEALESYFKAIELNRNDAWIFT 234
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
++ +A+ Y +A+ + DI + +A Y +G++EKA + +++++L
Sbjct: 235 RIGMCYKNMDKKEEAIEYYLKALELKEDDIFIMSDIAWLYDSLGEFEKALKYLKRLEELG 294
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-NAYEKT 225
++ K + +I + L+ D D + I + + Y++
Sbjct: 295 ENDAWTNTEYGYCLSKLKRFDEAIVKINRALEAEDDDKDTAYIYSQLGWCKRHLEKYDEA 354
Query: 226 LQHIEHAQIVRFSGKELPLKL---------KVKAGICYLRLGNMEKAEI-LFADLQW--- 272
++ A+ + + ++L + KA YL+ +K +I L +D+ W
Sbjct: 355 IKAFSQAKKWGRNDAWINIELGHCYKAKDERQKALDFYLKAEKFDKNDIYLLSDIAWHYD 414
Query: 273 ------------KNAI----DHADLITEVADTLMSLGHSNSALKYYHFLET--NAGTDNG 314
K A+ D A + E L LG A+K Y + G D
Sbjct: 415 AMDKNQEALKYIKRAVKLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALNLDEEGKDER 474
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNI 348
Y+ +L CY L E AI + KA + D+I
Sbjct: 475 YINSQLGWCYRQLGEYKKAIKYHKKAKELGRDDI 508
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 132/368 (35%), Gaps = 70/368 (19%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI + + N LG + A + A DFY+ A D L +
Sbjct: 351 YDEAIKAFSQAKKWGRNDAWINIELGHCYKAKDERQKALDFYLKAEKFDKNDIYLLSDIA 410
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+A+ YI++A++ D + + +G Y++A + YE L +
Sbjct: 411 WHYDAMDKNQEALKYIKRAVKLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALNLDEEG 470
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
D +QL G R +G ++ +K H +L D+ +
Sbjct: 471 KDERYINSQL----GWCYRQLGEYKKAIKYHKKAKELGRDDIWI---------------- 510
Query: 230 EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA--EILFADLQWKNAIDHADLITEVAD 287
V+ G+CY +L EKA L A +D D++
Sbjct: 511 -----------------NVEIGMCYAKLEEYEKAIENYLVA-----YEMDRDDIL----- 543
Query: 288 TLMSLGHSNSALKYY----HFL--ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
TL LG A++ Y FL G D+ +L ++ + I K+L
Sbjct: 544 TLTELGWVYDAMEKYDDAIEFLLKAEKLGRDDEWLNTEIGLNLGRSGKTQEGIERLQKSL 603
Query: 342 DRFEDN-------IDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNE 394
ED+ I++ + LEE EEA+ L+ K+L D WLN
Sbjct: 604 TMVEDDDTEQKIFINSEIGWLYGRLEEPDPEEALKYLNVAKELGRDDE--------WLNS 655
Query: 395 KIIMKLCH 402
++ +L +
Sbjct: 656 ELGFELGY 663
>gi|425457219|ref|ZP_18836925.1| Periplasmic protein [Microcystis aeruginosa PCC 9807]
gi|389801486|emb|CCI19345.1| Periplasmic protein [Microcystis aeruginosa PCC 9807]
Length = 363
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ + L N ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVKNGNYGEAIAVYERAAALDGNNARIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYENAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ + L P+N A + + ++ +++ ++ L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWVLALDPNNQQAHEIMGKALIEQNKSSEALDFLQKSLQRFPNNSE 211
>gi|150403612|ref|YP_001330906.1| hypothetical protein MmarC7_1699 [Methanococcus maripaludis C7]
gi|150034642|gb|ABR66755.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
Length = 409
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +A+ K V+L P P ++ +GL+++ L + + Y AA L+PKD W
Sbjct: 276 GKYNEAVLSYKNAVQLDPKNPIFWSGMGLSYNYLNEYNLSIQAYEKAAQLNPKDDVSWSN 335
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + + ++++ A+ P++ L + Y+ I +YEKA YE+ K+ P
Sbjct: 336 LGYMQYKNKNYSESISCFETALELNPENKYAWNGLGNSYILIKNYEKALMCYEKAIKIDP 395
>gi|15644443|ref|NP_229495.1| hypothetical protein TM1695 [Thermotoga maritima MSB8]
gi|418045753|ref|ZP_12683848.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermotoga
maritima MSB8]
gi|4982272|gb|AAD36762.1|AE001810_1 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351676638|gb|EHA59791.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermotoga
maritima MSB8]
Length = 357
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
SL G E+ I L + V + P L + Y +LG A+ LG+++ A ++ +P
Sbjct: 138 GSLLVEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPN 197
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D + + + A+ + + + +P +I L+ Y E+G+ EKA E E
Sbjct: 198 DKITYFMITEAYYEMNRKDLAVKTLERLLEIDPDNIPALYQLSQLYRELGNEEKAREMEE 257
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+I P + A++ LK G+ LE+ ++ P
Sbjct: 258 KIMNCKPKYPTELEPWARVMLKHGRYKEVAEELEKIVESSP 298
>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 1279
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+++AI+ + +R++PN + Y+ G+A S LG+ + A D Y + +L+PK ++ +
Sbjct: 356 NYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYNR 415
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
G AM QAI+ +P + + +G+Y+ A + Y IQ L
Sbjct: 416 GIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDY--IQAL--- 470
Query: 169 NVDATKTGAQLFLKCGQTARSI----GILEEY---LKVHPS 202
VD+ A+++ G T ++ G +++Y L ++P+
Sbjct: 471 RVDSNY--AEVYHNWGTTRINLEDNQGAIDDYTQALNINPN 509
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ A++ + + ++P+ PETY GL S LG+++ A D Y A +L+P + ++
Sbjct: 593 GDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPDYAYIYNN 652
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
D +A+ QA+ P + Y ++G+Y+ A + Y + ++ P
Sbjct: 653 RGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKP 712
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ D K G + +I L + S AD
Sbjct: 713 NCADTYVGRGTALYKLGDSQGAINDFHHALDIDASYAD 750
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 67/167 (40%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G ++ G+ + AI + + ++PN + Y G+A ++LG+ + A D Y A +++
Sbjct: 516 GRGIARFNLGDKQGAIDDYTQALNINPNYAQAYYNRGIARTSLGDKQGAVDDYTQALNIN 575
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P + + GD A+ QA+ P D I E+GD + A +
Sbjct: 576 PNYDQAYYAWGMVCSELGDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDD 635
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y Q L PD + R+I + L + P AD
Sbjct: 636 YTQALNLNPDYAYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYAD 682
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 67/161 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + A+ + + ++PN + Y G+ S LG+ A + Y A +++P D +
Sbjct: 559 GDKQGAVDDYTQALNINPNYDQAYYAWGMVCSELGDKPGAVNNYTQALNINPDDPETYIA 618
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QA+ P + + +I DY++A + Y Q + P
Sbjct: 619 RGLTRSELGDNQGAIDDYTQALNLNPDYAYIYNNRGVVRSDIADYQRAIDDYTQALNISP 678
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
D DA + G +I +++ P+ AD V
Sbjct: 679 DYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKPNCADTYV 719
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+Y GN ++AI + + ++PN + YN G+A++ LG+ + A D + A ++P +
Sbjct: 861 RYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQAIQINPYYAE 920
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ + GD A+ QA+ + + E+GD + A E + +
Sbjct: 921 AYNNRAIVCYELGDHQGAIEDFNQALNINSNYVEAYNKRGNIRYELGDRQGAIEDFNRAL 980
Query: 164 KL 165
L
Sbjct: 981 NL 982
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ AI+ + + ++ NLP+ Y G+A + LG+ + A D + A ++P
Sbjct: 219 GDNRGAINDFTQSISINSNLPQPYMERGIARTNLGDGQGAIDDFNQALDINPN------- 271
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV-----------EIGDYEKAA 156
L A +G + M Y+++AI +D + +HL S + ++GD + A
Sbjct: 272 LALAAYSRGVAHRDMGYLQKAI----EDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAI 327
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ + Q+ + P D ++ +I + ++++P+
Sbjct: 328 DDFNQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPN 373
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 60/155 (38%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + A+ + +++ PN + YN G + LGN++ A D Y+ A + + ++
Sbjct: 423 GSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYAEVYHN 482
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T + D A+ QA+ P +GD + A + Y Q + P
Sbjct: 483 WGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGRGIARFNLGDKQGAIDDYTQALNINP 542
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ A G ++ + L ++P+
Sbjct: 543 NYAQAYYNRGIARTSLGDKQGAVDDYTQALNINPN 577
>gi|256752460|ref|ZP_05493318.1| Tetratricopeptide TPR_2 repeat protein [Thermoanaerobacter
ethanolicus CCSD1]
gi|256748662|gb|EEU61708.1| Tetratricopeptide TPR_2 repeat protein [Thermoanaerobacter
ethanolicus CCSD1]
Length = 321
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 18/223 (8%)
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
TY LG+ LG AF FY ++ K + +++ A +GD A+ + I
Sbjct: 108 TYTPLGI----LGFIIFAFYFYALSKKPISKAVSFFEKG-KVAYNRGDYKSALDNFLKVI 162
Query: 130 RAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARS 189
EP ISL + Y+ +G+ EKA E +E+ +P++++A L +K GQ ++
Sbjct: 163 EIEPDAISLYKEIGIIYIHLGEDEKANECFEKYLFKYPEDLEAKTHYINLLIKVGQYQKA 222
Query: 190 IGIL----EEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLK 245
+ ++ EEY +L VI+ + +E N + L +E + + +K
Sbjct: 223 LELMNLLPEEY------KNNLFVINAMADCYIELNKPDMALAVLEKGPMRKRKTDTEEMK 276
Query: 246 L-KVKAGICYLRLGNMEKAEILFADL--QWKNAIDHADLITEV 285
+ + G Y +LG EKA F + + N +D A+++ E+
Sbjct: 277 VYRYLLGTVYRKLGQKEKALKQFQKIYVEDSNFLDVAEILNEM 319
>gi|392347771|ref|XP_342789.4| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
isoform 2 [Rattus norvegicus]
Length = 942
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 625 EEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNNYAV 684
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L + +G+ A E Y + ++
Sbjct: 685 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAE 744
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS DL + + ++A++ + EK HI
Sbjct: 745 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHI 803
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 33 GVTKMLGEASLQYAYGNF-------EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
GV + A + Y Y NF ++AI K ++L P N LG + K
Sbjct: 535 GVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYKTALKLYPRHASALNNLGTLTKDMAEAK 594
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+Y A L P+ + L + T +A+ ++++I+ P LAS
Sbjct: 595 M---YYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAYSSLASL 651
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E +++A + Y+ K PD+ D A + G +++ ++ +++ PS
Sbjct: 652 LAEQERFKEAEDVYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSH-H 710
Query: 206 LSVIDL--LVAILMENNA----YEKTLQHIEHAQIV 235
++V++L L L EN+ Y + LQ A+++
Sbjct: 711 VAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVL 746
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ ++ ++LSP+ LG H +LG + A ++Y A ++ + + +
Sbjct: 690 GFPEKAVAHYQQAIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVA-RTAEVLSP 748
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G +A+ R+A+ +P LR+ LA +G ++A + I P
Sbjct: 749 LGALYYNTGRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEP 808
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
++ + + ++ K +++ +E+ L++ P D
Sbjct: 809 RCLECYRLLSAIYSKQEHHEKALEAIEKALQLKPKD 844
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 13/160 (8%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
+ LGE S+ + + +A+ + + LSP YNT G HK A + Y A
Sbjct: 721 RSLGENSMAEEW--YRRALQVARTAEVLSPLGALYYNT--------GRHKEALEVYREAV 770
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P L L G T +A + EP+ + L++ Y + +EKA
Sbjct: 771 SLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRLLSAIYSKQEHHEKA 830
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
E+ E+ +L P + K ++LF G R +L++
Sbjct: 831 LEAIEKALQLKPKD---PKVISELFFTKGNQLREQNLLDK 867
>gi|443315706|ref|ZP_21045184.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 6406]
gi|442784704|gb|ELR94566.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 6406]
Length = 398
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
YGN AI++ ++ +RL P P ++ + ++ GNH A Y A L P
Sbjct: 83 YGN---AIAIYQQAMRLDPANPRLHSGIAYLYTQQGNHAEAISAYEQAIRLDPAHLPSRY 139
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L +Q +A+ R + +P++ + + L S Y++ DY A E+YE ++++
Sbjct: 140 ALAYSYIQLEQYNRALEVYRNILTVDPQNETAYLGLGSIYIQQEDYSAALEAYEGLRRVA 199
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV--IDLLVAILMENNAYEK 224
P+N + L+L + ++ L+++ + + L V + +A+ N+A++
Sbjct: 200 PNNPSGAEAVGNLYLIQENYTAARDAFQQALRLNANRSSLHVGLAEAQIALGQSNSAFQS 259
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
++ +A Y A L P + L + Q+G+ A+A+ QAIR +P + R L
Sbjct: 82 DYGNAIAIYQQAMRLDPANPRLHSGIAYLYTQQGNHAEAISAYEQAIRLDPAHLPSRYAL 141
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A Y+++ Y +A E Y I + P N A ++++ + ++ E +V P+
Sbjct: 142 AYSYIQLEQYNRALEVYRNILTVDPQNETAYLGLGSIYIQQEDYSAALEAYEGLRRVAPN 201
Query: 203 D 203
+
Sbjct: 202 N 202
>gi|434406141|ref|YP_007149026.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428260396|gb|AFZ26346.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 792
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 16/163 (9%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E I+ + +++ P+ P+ +N G+A LG ++ A Y A + P D W
Sbjct: 374 GRYEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNN 433
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEP--------KDISLRIHLASFYVEIGDYEKAAESY 159
+ G A+ A++ +P + I+LR ++G E A SY
Sbjct: 434 RGIALGKLGRNEDAIASYDAALKIQPDLHQAWYNRGIALR--------KLGRNEDAIASY 485
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ K+ PD+ DA K G+ +I + LK+ P
Sbjct: 486 DAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQPD 528
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E AI+ +++ P+ + +N G A LG ++ Y A + P D W
Sbjct: 340 GRYEDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNN 399
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G A+ A++ +P D + ++G E A SY+ K+ P
Sbjct: 400 RGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQP 459
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
D A K G+ +I + LK+ P D+D
Sbjct: 460 DLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSD 497
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 60/155 (38%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E AI+ +++ P+ P +N G+A LG ++ A Y A + P W
Sbjct: 408 GRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQPDLHQAWYN 467
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G A+ A++ +P D + + ++G E A SY+ K+ P
Sbjct: 468 RGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQP 527
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
D A G+ +I + LK P
Sbjct: 528 DLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPD 562
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 7/173 (4%)
Query: 40 EASLQYAYGN-------FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
+ASL + GN +E+AI+ +++ P+ + +N G+A LG ++ A Y
Sbjct: 223 KASLLFERGNLLAAAKEYEEAIASYDAALKIQPDKHQAWNNRGIALGNLGRNEDAIASYD 282
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
A + P W + G A+ A++ +P + + +G Y
Sbjct: 283 QALKIQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQPDYHQAWYNRGNDLGNLGRY 342
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E A Y+ K+ PD A G+ I ++ LK+ P D D
Sbjct: 343 EDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPDDPD 395
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E AI+ + +++ P+ + + G A LG ++ A Y A + P W
Sbjct: 272 GRNEDAIASYDQALKIQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQPDYHQAWYN 331
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G A+ A++ +P + + +G YE SY+Q K+ P
Sbjct: 332 RGNDLGNLGRYEDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQP 391
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
D+ DA K G+ +I + LK+ P D
Sbjct: 392 DDPDAWNNRGIALGKLGRYEDAIACYDAALKIQPDD 427
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E AI+ ++ P+ E +N G+A LG ++ A + A P D W
Sbjct: 680 GRYEDAIASYDAALKFQPDYHEAWNNRGIALGNLGRYEDAIASFEEAIKFQPDDHCAWYN 739
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKD 135
+ +G+ QA+ ++QAI P++
Sbjct: 740 KACYYALQGNIEQALENLQQAINLNPEE 767
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E AI+ ++ P+L + + G+A LG ++ A Y A P W
Sbjct: 646 GCYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASYDAALKFQPDYHEAWNN 705
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G A+ +AI+ +P D + A +Y G+ E+A E+ +Q L P
Sbjct: 706 RGIALGNLGRYEDAIASFEEAIKFQPDDHCAWYNKACYYALQGNIEQALENLQQAINLNP 765
Query: 168 D 168
+
Sbjct: 766 E 766
>gi|148270125|ref|YP_001244585.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1]
gi|147735669|gb|ABQ47009.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila
RKU-1]
Length = 357
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
SL G E+ I L + V + P L + Y +LG A+ LG+++ A ++ +P
Sbjct: 138 GSLLVEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPN 197
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D + + + A+ + + + +P +I L+ Y E+G+ EKA E E
Sbjct: 198 DKITYFMITEAYYEMNRKDLAVKALERLLEIDPDNIPALYQLSQLYRELGNEEKAREMEE 257
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+I P + A++ LK G+ LE+ ++ P
Sbjct: 258 KIMNCKPKYPTELEPWARVMLKHGRYKEVAEELEKIVESSP 298
>gi|430745512|ref|YP_007204641.1| Flp pilus assembly protein TadD [Singulisphaera acidiphila DSM
18658]
gi|430017232|gb|AGA28946.1| Flp pilus assembly protein TadD [Singulisphaera acidiphila DSM
18658]
Length = 826
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 7/187 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++ E +RL P PE +N LG+A G A Y A L P
Sbjct: 127 GKLDEAVACYNEALRLRPAYPEAHNNLGIALRHQGQTAEAVAAYQEALRLRPAYPEASNN 186
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G A+ +QAIR P D HLA+ ++ A +Y +L
Sbjct: 187 LGIALAAQGRHEAAVAAFQQAIRLRPNDAEAFAHLAAALGDLNRLTDAVAAYGHAIRLRA 246
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN------NA 221
D+ K K G+ SI E L++ P AD ++ DL +A+ +N +
Sbjct: 247 DDARTHKNLGITLAKLGKLDESIASYREALRLRPDYAD-ALNDLGIALARKNLFDEAAGS 305
Query: 222 YEKTLQH 228
Y + L H
Sbjct: 306 YRQALTH 312
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%)
Query: 73 TLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE 132
+LGLA + G + A D++ AA P ++ G +A+ R+A R
Sbjct: 16 SLGLAARSEGRNDLAADYFAQAAEAEPGNAEYHGHRAAVEFVLGRLDRALEAFREAARLR 75
Query: 133 PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
P + + L G ++AA Y + +L PD DA G+ ++
Sbjct: 76 PDSAAYQNDLGVVLARCGRQDEAATCYREAIRLRPDFPDAHNNLGNAIRLQGKLDEAVAC 135
Query: 193 LEEYLKVHPS 202
E L++ P+
Sbjct: 136 YNEALRLRPA 145
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++I+ +E +RL P+ + N LG+A + A Y A P + +
Sbjct: 263 GKLDESIASYREALRLRPDYADALNDLGIALARKNLFDEAAGSYRQALTHRPDYAEAFNN 322
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G A+A+ +A+ +P + E G + +A +SY + +L P
Sbjct: 323 LGNTLRNLGQFAEAVASYDRAVAIKPSYADAYNNRGIALAETGQFAEAVDSYTRCIRLRP 382
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
+VDA A +L+ G A+ E L+
Sbjct: 383 HHVDAHLNRALTWLREGNFAQGWAGYEWRLR 413
>gi|218199588|gb|EEC82015.1| hypothetical protein OsI_25970 [Oryza sativa Indica Group]
Length = 1174
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 139/326 (42%), Gaps = 54/326 (16%)
Query: 115 KGDTAQAMYYIRQAIR--AEPKDISLRIH-LASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
KGD A Y ++ ++P+D L L ++ DY+ + S+E++ ++ P+N +
Sbjct: 410 KGDIETAGRYYMASVNEISKPQDFVLPFFGLGQIQLKFADYKSSLASFEKVLEVHPENCE 469
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSD--ADLSVIDLLV----AILMEN------ 219
+ K ++ K G+ ++I ++ ++ P D A + + +LLV A ME
Sbjct: 470 SLKAIGHIYAKSGENDKAIETFKKVTRIDPKDHQAFMELGELLVQSDWATAMEYLKTVRL 529
Query: 220 ----NAYEKTLQHI-----EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF--- 267
Y +L I + +++ SG+++P++L G+ + G +E AE F
Sbjct: 530 FTSLEVYSVSLYQILPWISQARNLLKKSGEKIPIELLNGIGLLHFEKGELEMAEQSFKEA 589
Query: 268 -ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGT------DNGYLYLKL 320
D W + ID + V ++++ ++ LE GT D
Sbjct: 590 LGDGFWVSIIDGS-----VGSSVVNWSIQYRDQSFFQQLEEE-GTPLELPWDKVTTLFNY 643
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD-- 378
A + L + A +F+ + ++ D ID L LA++ E+ + +I L+ +D
Sbjct: 644 ARLFEELHDTVKASLFYRLIIFKYPDYIDTYLRLAAIAKEKNNLQLSIELIGDALKIDDK 703
Query: 379 ---------SLDMNSDKSNPWWLNEK 395
SL++ D++ WL K
Sbjct: 704 YPNALSMLGSLELQGDET---WLTAK 726
>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 1121
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+++A+ + ++P+ E + G+ + G++++A Y A L+P + W
Sbjct: 214 NYDEAMKCFDGALNITPDDSELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAW--- 270
Query: 109 LTFAVQKGDTAQAMYYIRQAIR-------AEPKDISLRIHLASFYVEIGDYEKAAESYEQ 161
KG + M + A+ +EP+++S ++G E+A + YE+
Sbjct: 271 ----YNKGVDLEGMEMYQDALTCYEFVLLSEPENLSALQKKGFCLEQLGRNEEALQCYEE 326
Query: 162 IQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
I PDN DA + + G +I Y + DA + V ++ A+L E NA
Sbjct: 327 ILIYNPDNADAWYSKGSVLNAMGDYDAAIAC---YDRALNPDAGIEVEEVGDALLEEFNA 383
Query: 222 YEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
Y+ +L ++++ F K +K+ G+ + +L N E A
Sbjct: 384 YDSSLPI--YSEVPEF--KSSAVKIWYDKGLAFDKLENYESA 421
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 17/220 (7%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E A+ + ++P E + G A LG + A + Y A L P+ S W +
Sbjct: 658 YEDALYAYDTALSINPLRTEAWYEKGSALDKLGRSEEALECYKKALDLDPQSSNAWYGMA 717
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ + G + +A+ Y Q + A D + + +G YE+A + + +L P+N
Sbjct: 718 STSNTLGRSEEAVAYYDQLLAANASDPEALQGKSEALINLGRYEEAIACFNPLLELEPEN 777
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEY---LKVHPSDADLSVIDLLVAILMENNAYEK-- 224
++A A L ++ R LE+Y L++ PS+ + ++ E YE+
Sbjct: 778 IEALDGRA---LALARSERREEALEDYNRILQLDPSNT--KALAEKASLFEELGRYEEAA 832
Query: 225 -TLQHI-----EHAQIVRFSGKELPLKLKVKAGI-CYLRL 257
T I E+ +I+ GK L K +A I CY ++
Sbjct: 833 STYGEILLITPENREIMYRQGKALEAKGDFEAAIACYDQI 872
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G+FE AI+ +++ L P + N G A++ + ++ A Y A +P ++A W
Sbjct: 858 AKGDFEAAIACYDQILTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAPNNAAAW 917
Query: 106 --KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
K FA+ A + + ++ +P I+ + Y +G+ ++ SY+
Sbjct: 918 YFKGCANFAISSNIAAVECF--DKVVQLKPDCITAWYNKGYLYNVMGEVNESINSYDGAL 975
Query: 164 KLFPD 168
+ P+
Sbjct: 976 AINPN 980
>gi|344201619|ref|YP_004786762.1| hypothetical protein [Muricauda ruestringensis DSM 13258]
gi|343953541|gb|AEM69340.1| Tetratricopeptide TPR_1 repeat-containing protein [Muricauda
ruestringensis DSM 13258]
Length = 466
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +AI + + + + LG H LGN+ A +Y H P W
Sbjct: 248 GRYNEAIENYESTISIEDPTSYAFLRLGKCHEKLGNYDLAKYYYYHTVHEDPLLDKGWLA 307
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ F ++ + +A+YYI +AI + ++ Y + ++++A +Y+Q L
Sbjct: 308 ITDFHFRQKNYEKAIYYINKAINIDGENPKYWKKAGKLYAALNNWDEADFAYKQAVDLGN 367
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
++ + A++ K G +I +L + L+ +P ++DL+
Sbjct: 368 YELETWRNWAEVLNKIGDYNSAIQVLIQGLEFYPDNSDLT 407
>gi|313202117|ref|YP_004040775.1| hypothetical protein MPQ_2395 [Methylovorus sp. MP688]
gi|312441433|gb|ADQ85539.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
Length = 317
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 13/201 (6%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
L A+L Y G +QAI++ K+ + + P++ + + L + + K A A +
Sbjct: 42 LNYANLHYVCGRLQQAIAMCKQALAIHPDIADAHYNLAVFYVEQKKIKEAVASLQAAIKV 101
Query: 98 SPKDSALWKQLLTFAVQK---GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
+P+ + + VQ+ G +A+ R I + P+ +LA+ + G Y
Sbjct: 102 NPEYAEAY---FLLGVQQKALGQLTEAIASFRYVIASNPQVWEAHFNLANTLAQAGQYAA 158
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
A ESYE++ + D+++A + L G+T +I L+ + HP D + I+L A
Sbjct: 159 AIESYERVLAMQGDHLEARFNLSNALLNAGKTDEAIQRLQAIIAGHP-DFHTAYINLGNA 217
Query: 215 ILMEN------NAYEKTLQHI 229
L + +Y LQHI
Sbjct: 218 YLAKRQYADAITSYRTALQHI 238
>gi|170740913|ref|YP_001769568.1| hypothetical protein M446_2695 [Methylobacterium sp. 4-46]
gi|168195187|gb|ACA17134.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
Length = 292
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 54 ISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
I+ L +V++ +P+ P YNT G A++ GN+ A + A L P ++ +
Sbjct: 56 IASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYR 115
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
Q G A+ +A+ A+P + I A+ +G+YE A Q +L P++ +A
Sbjct: 116 QSGRNDAALQDFTRALTADPNYSAAYIGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAY 175
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ GQ +IG + + +P
Sbjct: 176 HARGLVRQAQGQHRAAIGDFDAAIDRNP 203
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+G A+LQ A GN+E A S L + +RL+P E Y+ GL A G H++A + A
Sbjct: 142 IGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGDFDAAIDR 201
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P SA + + +A+ A+ KD + Y + G ++A E
Sbjct: 202 NPFVSAPYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSGRRQEAME 261
Query: 158 SYEQIQKLFPDNV 170
SY++ + +N
Sbjct: 262 SYQRATAIDQNNA 274
>gi|444912555|ref|ZP_21232716.1| hypothetical protein D187_04652 [Cystobacter fuscus DSM 2262]
gi|444716773|gb|ELW57614.1| hypothetical protein D187_04652 [Cystobacter fuscus DSM 2262]
Length = 588
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 7/214 (3%)
Query: 57 LKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKG 116
L+ +RL P PE Y L H H A A P + + +++L ++G
Sbjct: 110 LRRAIRLKPREPEAYLQLAQLHLEARAHDKAVKAVEALAAALPGEVSGYRRLGMALAERG 169
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
D +A +++A+ +P D+ I LA + G A E + + PDN +
Sbjct: 170 DAVRAERMLKRALERDPGDLEALITLARLNEKAGRLAAAEEYLARALERDPDNAAMLEGA 229
Query: 177 AQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVR 236
+L L+ G + R+ + L D +L+V L+ + +N L+ ++ A+
Sbjct: 230 GRLALRLGSSVRARAYFDRLL-ADAGDPELTVQVALLFLSARDN--PSALEVLDAAR--- 283
Query: 237 FSGKELPLKLKVKAGICYLRLGNMEKAEILFADL 270
G+ ++ AG+ + RL + E+A +A++
Sbjct: 284 -GGRGASPRVSFYAGLVHERLRHFEQAAAAYAEV 316
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 12/175 (6%)
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
++G +A+ +R+AI P+D + R LA+ +++GD A S + +L PD+ A
Sbjct: 403 RQGRPGEALAALREAISQAPEDAAPRYVLATVLLDMGDVPGALYSMRGVLRLEPDHAAAM 462
Query: 174 KTGAQLFLKCGQT-ARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
L + G+ A + ++ L + P S +D L I + Y ++ + A
Sbjct: 463 NFIGYLLAQHGRDFAEAERLVRRALALRPDTG--SFLDSLGWIHYQRGDYPSAVRTLARA 520
Query: 233 QIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVAD 287
+ E P+ L+ G Y R+ E A WK A+D + + E AD
Sbjct: 521 AELE---PEEPVILE-HLGDAYQRVARPEAAAE-----AWKRALDVLERMPEAAD 566
>gi|109474510|ref|XP_001075561.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Rattus norvegicus]
Length = 942
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLKE ++ P+ + Y++L + K A D Y P S L
Sbjct: 625 EEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNNYAV 684
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L + +G+ A E Y + ++
Sbjct: 685 FLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAE 744
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ + E + + PS DL + + ++A++ + EK HI
Sbjct: 745 VLSPLGA-LYYNTGRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHI 803
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 33 GVTKMLGEASLQYAYGNF-------EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
GV + A + Y Y NF ++AI K ++L P N LG + K
Sbjct: 535 GVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYKTALKLYPRHASALNNLGTLTKDMAEAK 594
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+Y A L P+ + L + T +A+ ++++I+ P LAS
Sbjct: 595 M---YYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAYSSLASL 651
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E +++A + Y+ K PD+ D A + G +++ ++ +++ PS
Sbjct: 652 LAEQERFKEAEDVYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSH-H 710
Query: 206 LSVIDL--LVAILMENNA----YEKTLQHIEHAQIV 235
++V++L L L EN+ Y + LQ A+++
Sbjct: 711 VAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVL 746
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ ++ ++LSP+ LG H +LG + A ++Y A ++ + + +
Sbjct: 690 GFPEKAVAHYQQAIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVA-RTAEVLSP 748
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G +A+ R+A+ +P LR+ LA +G ++A + I P
Sbjct: 749 LGALYYNTGRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEP 808
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
++ + + ++ K +++ +E+ L++ P D
Sbjct: 809 RCLECYRLLSAIYSKQEHHEKALEAIEKALQLKPKD 844
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 13/160 (8%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
+ LGE S+ + + +A+ + + LSP YNT G HK A + Y A
Sbjct: 721 RSLGENSMAEEW--YRRALQVARTAEVLSPLGALYYNT--------GRHKEALEVYREAV 770
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P L L G T +A + EP+ + L++ Y + +EKA
Sbjct: 771 SLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRLLSAIYSKQEHHEKA 830
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
E+ E+ +L P + K ++LF G R +L++
Sbjct: 831 LEAIEKALQLKPKD---PKVISELFFTKGNQLREQNLLDK 867
>gi|88602758|ref|YP_502936.1| hypothetical protein Mhun_1483 [Methanospirillum hungatei JF-1]
gi|88188220|gb|ABD41217.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 221
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 75/158 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A+ L+++++ +P+ P +N G+A +G+H+ + Y P + W
Sbjct: 19 GRPEKALKPLEKLIKDAPDNPALWNLKGVALGMIGDHEGSLACYEKVLTTDPGPAVYWNN 78
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G A+A ++A+ +P+ + R +LA+ +G +E+A + YE++ P
Sbjct: 79 KGLALQNLGRYAEAEEMYKKALERDPESLEARYNLANTLQSLGRFEEALDYYEKVLYDRP 138
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
D++ + +I + +E L+++P +D
Sbjct: 139 DHILTMLNMGNALAALHRFEEAIAMYQEILEINPEYSD 176
>gi|75910751|ref|YP_325047.1| hypothetical protein Ava_4554 [Anabaena variabilis ATCC 29413]
gi|75704476|gb|ABA24152.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 547
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL- 108
+E AI + +R++P+ Y A S LG+++ A + Y A ++P+ + +K
Sbjct: 337 YEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRG 396
Query: 109 ---LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
A Q G T QAI+ P D + + + +IGDY A E Y Q ++
Sbjct: 397 ISRYLLATQPGFT--------QAIKINPNDANAYKNRGNARADIGDYAGAIEDYNQAIQI 448
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
P DA G +I + ++++PS AD
Sbjct: 449 NPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSYAD 488
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G + +I + ++ S N E Y GL + LG++++A Y A +L+ D+
Sbjct: 264 FAQGEYTASIKNYSQALQASSNNGELYYKRGLTYYQLGDYEAAIADYSQAINLNFHDAKS 323
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + Q A+ QAIR P S+ + A +GD + A E Y Q K
Sbjct: 324 YHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQAIK 383
Query: 165 LFPDNVDATKT-GAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ P D K G +L Q + +K++P+DA+
Sbjct: 384 INPQYADTYKNRGISRYLLATQPG-----FTQAIKINPNDAN 420
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++P +TY G++ L + A ++P D+ +K
Sbjct: 369 GDNQGAIEDYTQAIKINPQYADTYKNRGISRYLLATQPG----FTQAIKINPNDANAYKN 424
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD A A+ QAI+ PK + + ++GD E A Y Q ++ P
Sbjct: 425 RGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINP 484
Query: 168 DNVDA 172
DA
Sbjct: 485 SYADA 489
>gi|408419304|ref|YP_006760718.1| tetratricopeptide (TRP1+2) repeat protein [Desulfobacula toluolica
Tol2]
gi|405106517|emb|CCK80014.1| tetratricopeptide (TRP1+2) repeat protein [Desulfobacula toluolica
Tol2]
Length = 588
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E A+ + ++++ P+ G+++ A+G+ K A +Y+ + P S K +L
Sbjct: 311 YEDAVIVFSQMLKADPDNSTLNFFTGMSYEAVGDFKKAISYYL---KIKPDHSQYKKTIL 367
Query: 110 TFAV---QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
A+ + G+ A Y+ + PKDI + I+LASFY + +Y++A +++ +
Sbjct: 368 NIAMLYKRLGEELSARNYLEDKYKLFPKDIDIIIYLASFYEKDNNYDQAIALFKKGLEDS 427
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
P+N L K G S+ +++ +++ P DA
Sbjct: 428 PENTSLLFRLGALQDKAGFAEESMVTMKKIIEIDPKDA 465
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G+F++AIS ++ +T + + + LG SA ++ L PKD +
Sbjct: 341 AVGDFKKAISYYLKIKPDHSQYKKTILNIAMLYKRLGEELSARNYLEDKYKLFPKDIDII 400
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L +F + + QA+ ++ + P++ SL L + + G E++ + ++I ++
Sbjct: 401 IYLASFYEKDNNYDQAIALFKKGLEDSPENTSLLFRLGALQDKAGFAEESMVTMKKIIEI 460
Query: 166 FPDNVDATKTGAQLFLKCG-QTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
P + A + G + ++ +L+ ++ P D + D L + + Y+K
Sbjct: 461 DPKDASALNYLGYSYADRGIKLDEALLLLKRAYELRPDDG--YITDSLGWVYYKLGQYQK 518
Query: 225 TLQHIEH-AQIVRF 237
++H+E AQ+ F
Sbjct: 519 AVEHLEKAAQLTSF 532
>gi|425446307|ref|ZP_18826315.1| Periplasmic protein [Microcystis aeruginosa PCC 9443]
gi|389733536|emb|CCI02720.1| Periplasmic protein [Microcystis aeruginosa PCC 9443]
Length = 363
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ + L N ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVKNGNYGEAIAVYERAAALDGNNARIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYDNAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ + L P+N A + + ++ +++ ++ L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWVLALDPNNQQAHEIMGKALIEQNKSSEALDFLQKSLQRFPNNSE 211
>gi|158333858|ref|YP_001515030.1| M50 family peptidase [Acaryochloris marina MBIC11017]
gi|158304099|gb|ABW25716.1| peptidase, M50 family [Acaryochloris marina MBIC11017]
Length = 556
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E I+ ++ + L P + GLAH LG +K+A D + AA++ P W
Sbjct: 366 YEDEITDYEQALALDPENANIWCDHGLAHYHLGQYKAAIDSFDRAAYIDPSSWTAW---- 421
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLR-------IHLASFYVEIGDYEKAAESYEQI 162
KG +AIR ++LR I S +++ D+E A SY+Q
Sbjct: 422 ---YLKGLALMPQQQFERAIRCYDHALNLRADATQTWIAKGSALLQLQDFEGAIASYDQA 478
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAY 222
L P+N A A + GQ +++ +L + L + P +DL+ D+ + L A+
Sbjct: 479 LSLEPENATAVYNKACTYSLQGQREKALEMLSQALNLDPKVSDLAASDVDLDPLRSEPAF 538
Query: 223 EKTL 226
++ +
Sbjct: 539 QQLM 542
>gi|46201738|ref|ZP_00054480.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 495
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G E+AI + ++P L + + LG A A G A D + A L P+ + +
Sbjct: 150 AAGRLEEAIDAFAKAAEMAPGLAKAHGNLGGALFAAGRWVDAVDAWARALALEPRHADVR 209
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ + G +A+ RQA +P + +L ++G E+A +SY Q+ L
Sbjct: 210 SDMGVALAKLGRLDEAVDCFRQASEIDPGNPGHGYNLGRALHDLGRLEEALQSYAQVIAL 269
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
P ++ A +F K G +++ + L++ P++ S+
Sbjct: 270 DPCHLSAHLNSGVIFKKAGDYDQALAAYDRVLELDPANGAASL 312
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 15/185 (8%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+++PG+ K G +A G + A+ + L P + + +G+A + LG A
Sbjct: 166 EMAPGLAKAHGNLGGALFAAGRWVDAVDAWARALALEPRHADVRSDMGVALAKLGRLDEA 225
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
D + A+ + P + L G +A+ Q I +P +S ++ +
Sbjct: 226 VDCFRQASEIDPGNPGHGYNLGRALHDLGRLEEALQSYAQVIALDPCHLSAHLNSGVIFK 285
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH------- 200
+ GDY++A +Y+++ +L P N A+ L G+T +G LEE L+ +
Sbjct: 286 KAGDYDQALAAYDRVLELDPANGAAS-------LNRGKTLFELGRLEEALEAYTTARNLM 338
Query: 201 PSDAD 205
P DAD
Sbjct: 339 PDDAD 343
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G F+ AI+ +E + L+P E LGLA A G + A D + AA ++P +
Sbjct: 116 AQGRFDHAIAHFREGLALAPGDAEARCNLGLACRAAGRLEEAIDAFAKAAEMAPGLAKAH 175
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L G A+ +A+ EP+ +R + ++G ++A + + Q ++
Sbjct: 176 GNLGGALFAAGRWVDAVDAWARALALEPRHADVRSDMGVALAKLGRLDEAVDCFRQASEI 235
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
P N G L G+ +G LEE L+
Sbjct: 236 DPGN---PGHGYNL----GRALHDLGRLEEALQ 261
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD-SALWK 106
G ++A+ ++ + P P LG A LG + A Y L P SA
Sbjct: 220 GRLDEAVDCFRQASEIDPGNPGHGYNLGRALHDLGRLEEALQSYAQVIALDPCHLSAHLN 279
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ F + GD QA+ + + +P + + ++ E+G E+A E+Y + L
Sbjct: 280 SGVIFK-KAGDYDQALAAYDRVLELDPANGAASLNRGKTLFELGRLEEALEAYTTARNLM 338
Query: 167 PDNVDA 172
PD+ DA
Sbjct: 339 PDDADA 344
>gi|182413169|ref|YP_001818235.1| hypothetical protein Oter_1350 [Opitutus terrae PB90-1]
gi|177840383|gb|ACB74635.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
Length = 766
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+ ++L ++ V P+ P ++ GLA +A G A + A L P QL
Sbjct: 456 YRSELALWQDTVAKRPDNPRAHHNFGLALAAAGRSDEAMAEFRRAIALQPNHVFAHTQLA 515
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ +G+ A + R A+ A+P + R++L +G ++AA YE + + P
Sbjct: 516 LALLDRGEPEAASAHFRAALAADPSYAAARVNLGRALARLGRTDEAATEYEAVLRAEPGA 575
Query: 170 VDATKTGAQLFLKCGQTAR 188
VDA A L L G+T R
Sbjct: 576 VDAGTNLAALLLARGETER 594
>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 832
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
ASL YA + AI+ L + +++ P+ + + G+A LG+++ A + A + P
Sbjct: 229 ASLLYAAKEYAVAITALDQALKVKPDDHQAWQNKGVALGNLGHYEEALAAFDQALKVKPD 288
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
W V +A+ QA++ +P D + + ++G YE+A +++
Sbjct: 289 QHQAWYNKGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFD 348
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
Q K+ D A K G+ +I ++ LKV P D
Sbjct: 349 QALKVKSDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDD 391
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A++ + +++ P+ E + G LG ++ A + A + P +WK
Sbjct: 542 GRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKN 601
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
V G +A+ QA++ +P D + V +G Y++A +++Q K+ P
Sbjct: 602 KGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIAFDQTLKVKP 661
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
D + + + G+ +I ++ LKV P
Sbjct: 662 DQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPD 696
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 88/216 (40%), Gaps = 6/216 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++A++ + +++ P+ + + G+ LG ++ A + A + P D W
Sbjct: 576 GCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSN 635
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
V G +A+ Q ++ +P + + V +G Y++A +++Q K+ P
Sbjct: 636 KGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKP 695
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D + K G+ ++ ++ LKV P V + L+ Y++ +
Sbjct: 696 DQYEVWNNKGIALGKLGRYQEALAAFDQTLKVKPD--QYEVWNNKGIALVNLGRYQEAIT 753
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ V+ K+ CY GN+E+A
Sbjct: 754 AFDQTLKVKPDDD----KIFYNKACCYALQGNVEQA 785
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A++ + +++ + + +N G A LG ++ A + A + P D W
Sbjct: 338 GRYEEALAAFDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNN 397
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ Q ++ +P + + ++G YE+A +++Q K+ P
Sbjct: 398 KGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKP 457
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
D A K G ++ ++ LKV P
Sbjct: 458 DQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPD 492
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/163 (19%), Positives = 71/163 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++A+ + +++ P+ E +N G+ LG ++ A + + P +W
Sbjct: 644 GRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNN 703
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ Q ++ +P + + V +G Y++A +++Q K+ P
Sbjct: 704 KGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAITAFDQTLKVKP 763
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
D+ A + G ++I L++ + + P DL+ D
Sbjct: 764 DDDKIFYNKACCYALQGNVEQAINNLQQAINLDPKYRDLAKTD 806
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 68/152 (44%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+A++ + +++ + + +N G+A LG + A Y A + P WK
Sbjct: 511 EEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGN 570
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
V G +A+ QA++ +P + + V +G Y++A +++Q K+ P++
Sbjct: 571 TLVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDH 630
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ + + G+ ++ ++ LKV P
Sbjct: 631 EPWSNKGIVLVNLGRYQEALIAFDQTLKVKPD 662
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+A++ + +++ P+ + +N G+A LG + A + A + W
Sbjct: 477 EEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGI 536
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+ G +A+ +A++ +P + + V +G Y++A +++Q K+ PD
Sbjct: 537 ALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQH 596
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
K + + G ++ ++ LKV P+D
Sbjct: 597 QVWKNKGIVLVNLGCYQEALVAFDQALKVKPND 629
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 112/289 (38%), Gaps = 41/289 (14%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A++ + +++ P+ + +N G A LG ++ A + A + P W
Sbjct: 406 GRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNN 465
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEP--------KDISL------RIHLASF-------- 145
+ G +A+ QA++ +P K I+L LA+F
Sbjct: 466 KGIALGKLGCDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKS 525
Query: 146 ------------YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
++G E+A +Y + K+ PD +A K + G ++
Sbjct: 526 DQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAF 585
Query: 194 EEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGIC 253
++ LKV P V +L+ Y++ L + A V+ + E P K GI
Sbjct: 586 DQALKVKPDQH--QVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHE-PWSNK---GIV 639
Query: 254 YLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY 302
+ LG ++A I F D K D ++ L++LG A+ +
Sbjct: 640 LVNLGRYQEALIAF-DQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAF 687
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 62/152 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI+ + +++ P+ + +N G A LG ++ A + + P W
Sbjct: 372 GRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNN 431
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ QA++ +P + ++G E+A +++Q K+ P
Sbjct: 432 KGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKP 491
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
D A K G ++ ++ LKV
Sbjct: 492 DQHQAWNNKGIALGKLGCDEEALAAFDQALKV 523
>gi|404485929|ref|ZP_11021125.1| hypothetical protein HMPREF9448_01550 [Barnesiella intestinihominis
YIT 11860]
gi|404337840|gb|EJZ64290.1| hypothetical protein HMPREF9448_01550 [Barnesiella intestinihominis
YIT 11860]
Length = 472
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +E+AI E ++ Y +G + L ++ +A F+ A + P +S +
Sbjct: 239 YDSGQYEKAIEQFLEYESITKEKSVAYELIGECYVKLDDNNNALKFFHKALDIEPSNSNI 298
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
QL T + GD +A+ Y+R + + +D L ++ GDYE+A + +
Sbjct: 299 CYQLATCYYELGDIQKAVVYLRDTLSLDSRDDEAHSFLGEILLQEGDYEEAYYHLSKSLE 358
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYE 223
L D+++ K + L ++ + E L+ D + + L A + ++ E
Sbjct: 359 LNEDDMETMKLKGEACLHLEYYEEAVSVFETVLREDSYDLHCRLKLALAYAKMGDDANAE 418
Query: 224 KTLQHIEH-AQIVRFSG 239
+ +Q I+ +Q FSG
Sbjct: 419 RQIQIIDQMSQSSDFSG 435
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP-SDA 204
Y + +++ E E+ K+ PD+ + + A + + + RS+ I + + P S
Sbjct: 136 YTDYDCFDELVEFVEKAGKVLPDSRELFREMAAICEERSEYERSVIIYNKLIDKDPYSLQ 195
Query: 205 DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAE 264
D + + A+L Y+K ++ + A V+ +E + K G CY G EKA
Sbjct: 196 DWFSLAKVEALL---KHYDKAVEACDFALAVK-ENEESIISFK---GYCYYDSGQYEKAI 248
Query: 265 ILFADLQWKNAIDHADLITE-VADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAEC 323
F L++++ + E + + + L +N+ALK++H + N + +LA C
Sbjct: 249 EQF--LEYESITKEKSVAYELIGECYVKLDDNNNALKFFH-KALDIEPSNSNICYQLATC 305
Query: 324 YLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMN 383
Y L + A+++ L + +A L +LL+E EEA LS +L+ DM
Sbjct: 306 YYELGDIQKAVVYLRDTLSLDSRDDEAHSFLGEILLQEGDYEEAYYHLSKSLELNEDDME 365
Query: 384 S 384
+
Sbjct: 366 T 366
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 122/299 (40%), Gaps = 41/299 (13%)
Query: 115 KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATK 174
KG ++A++ I + P ++ L++ A + + + ++A E+ + +L ++DAT
Sbjct: 40 KGQLSKALHAIEFGLNLHPDNVDLKLKEARYMLYL---DRADEAKRIMSELADYSLDATL 96
Query: 175 TGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQI 234
A+L G +L L D V I + + +++ ++ +E A
Sbjct: 97 IRAELLFIDGYMKDGHALLLAMLDNDDIREDFCFD--AVDIYTDYDCFDELVEFVEKAGK 154
Query: 235 VRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADL---------QW------KNAIDHA 279
V +EL + A IC R E++ I++ L W + + H
Sbjct: 155 VLPDSREL---FREMAAICEER-SEYERSVIIYNKLIDKDPYSLQDWFSLAKVEALLKHY 210
Query: 280 DLITEVADTLMSLGHSNSALK------YY----------HFLETNAGT-DNGYLYLKLAE 322
D E D +++ + ++ YY FLE + T + Y + E
Sbjct: 211 DKAVEACDFALAVKENEESIISFKGYCYYDSGQYEKAIEQFLEYESITKEKSVAYELIGE 270
Query: 323 CYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
CY+ L + +A+ FF+KALD N + LA+ E ++A+ L LDS D
Sbjct: 271 CYVKLDDNNNALKFFHKALDIEPSNSNICYQLATCYYELGDIQKAVVYLRDTLSLDSRD 329
>gi|390335042|ref|XP_782701.2| PREDICTED: intraflagellar transport protein 88 homolog
[Strongylocentrotus purpuratus]
Length = 816
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 66/134 (49%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
AS+ + QA +++ + P P + +G + G+ A+ ++ + P
Sbjct: 546 ASINEMLEDIPQASEWFMQLIGIVPTDPGILSRMGELYDNEGDKSQAYQYHFESFRYYPS 605
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + L + + +A++Y +A +P + ++ +AS + G+Y++A E+Y+
Sbjct: 606 NIEIIEWLGAYFIDSQFVEKAIHYFERAAVIQPNQVKWQLMIASCHRRSGNYQQALETYK 665
Query: 161 QIQKLFPDNVDATK 174
+I K FPDNV+ K
Sbjct: 666 KIHKKFPDNVECLK 679
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 69/166 (41%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
++ + + Y G+ E+A +E +R + E LGL + LG+ + A D ++
Sbjct: 474 LVNKGNCVYVQGDLEKAKECYQEALRTEASCTEALYNLGLVNKKLGHLEPALDCFLKLHA 533
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
+ ++ + Q+ + D QA + Q I P D + + Y GD +A
Sbjct: 534 ILRNNAEVIFQIASINEMLEDIPQASEWFMQLIGIVPTDPGILSRMGELYDNEGDKSQAY 593
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ + + + +P N++ + F+ ++I E + P+
Sbjct: 594 QYHFESFRYYPSNIEIIEWLGAYFIDSQFVEKAIHYFERAAVIQPN 639
>gi|170693696|ref|ZP_02884854.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
gi|170141478|gb|EDT09648.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
Length = 615
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G QA++ + + L PNLP +G A +ALG H A + + L P+ + W
Sbjct: 217 ATGRHAQAVASFEAALALQPNLPPAIYGMGNALAALGRHTEAIPYLERSVGLDPQFALAW 276
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
L T G A A+ QA+R +P S ++ A ++ +GD+ + YE
Sbjct: 277 LSLGTAHQALGAHATALRAFDQALRLQPDLASAHMNRALAWLALGDFARGLPEYE 331
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 13/218 (5%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G ++AI + + L+P+ P + LG A++A G H+ A D + + HL P D++
Sbjct: 81 ALGQIDEAIDQFRNALTLAPSFPMAHYNLGNAYAATGRHEDAADAFRRSLHLQPDDASSH 140
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L G +A+ R+ + P ++ +G ++A ++
Sbjct: 141 NNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGMSLNALGRADEAIPCFKAALAA 200
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P V A A F G+ A+++ E L + P +L AI NA
Sbjct: 201 EPRFVAAHFNLANTFDATGRHAQAVASFEAALALQP--------NLPPAIYGMGNALAAL 252
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+H E + E + L + + +L LG +A
Sbjct: 253 GRHTEAIPYL-----ERSVGLDPQFALAWLSLGTAHQA 285
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 104/281 (37%), Gaps = 24/281 (8%)
Query: 69 ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA 128
+ + LG+ G H A + A +L P+D+AL L G +A+ R A
Sbjct: 36 DALHLLGVLRHQQGQHAEAAELVRRAVNLRPQDAALQLNLGNALKALGQIDEAIDQFRNA 95
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
+ P +L + Y G +E AA+++ + L PD+ + G+
Sbjct: 96 LTLAPSFPMAHYNLGNAYAATGRHEDAADAFRRSLHLQPDDASSHNNLGNALHALGRHEE 155
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE-----HAQIVRFSGKELP 243
+I L++ P A L + M NA + + I A RF
Sbjct: 156 AIASFRRTLELRPGHA-----GALNNMGMSLNALGRADEAIPCFKAALAAEPRFVAAHFN 210
Query: 244 LKLKVKA-GICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY 302
L A G + + E A L +L I + + L +LG A+ Y
Sbjct: 211 LANTFDATGRHAQAVASFEAALALQPNLP--------PAIYGMGNALAALGRHTEAIPY- 261
Query: 303 HFLETNAGTDNGY--LYLKLAECYLSLKERAHAIMFFYKAL 341
LE + G D + +L L + +L A A+ F +AL
Sbjct: 262 --LERSVGLDPQFALAWLSLGTAHQALGAHATALRAFDQAL 300
>gi|134045733|ref|YP_001097219.1| hypothetical protein MmarC5_0693 [Methanococcus maripaludis C5]
gi|132663358|gb|ABO35004.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis
C5]
Length = 395
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 150/377 (39%), Gaps = 23/377 (6%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
K+ G+ Y G +++AI L + + PN P + G A+ L K A D Y A
Sbjct: 14 KLFGKGMEYYNRGKYQKAIELFNKTINSEPNNPHAWYFKGHAYQMLDKPKLAQDSYEKAL 73
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+SP D + K +++ ++ +EP D + L + Y+++G +++A
Sbjct: 74 SISPNDLEMVKNYAMLLNSLELFNESVEVLKDV--SEP-DFEITEILGNAYLKMGKFDEA 130
Query: 156 AESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
+++I + P + + + + ++ I E+ LK+ P D + V +
Sbjct: 131 LVEFDKILEKKPKYKEVLAKKGTVLVGLKKFDEALDIYEKVLKISPYDTE--VWKNIGNA 188
Query: 216 LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNA 275
YEK +Q + + + + ++ + G + +LG +A L+ + K+
Sbjct: 189 FYTVKKYEKAIQFYD----MYLTEHKGDFEVTLSKGDAFRKLGKTNEALDLYTKVLEKHM 244
Query: 276 IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIM 335
H L YY L + N + +KLA Y+ LK ++
Sbjct: 245 NSHEPWCR--VGLLYYDNKDYETATYYLELASERNPLNPSILIKLARTYIRLKNYNKSLE 302
Query: 336 FFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEK 395
F KALD+ + A +L + EAI ++++N + S+ W
Sbjct: 303 FIEKALDKDNEYAKAWCYKGQVLDILERHYEAIDCYKK-----AINLNKNVSDFW----- 352
Query: 396 IIMKLCHIYRAKGMPED 412
++L +Y G ED
Sbjct: 353 --IQLSKVYGTVGKKED 367
>gi|196228972|ref|ZP_03127838.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196227253|gb|EDY21757.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 555
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 55/137 (40%)
Query: 68 PETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQ 127
PE L L H G A + P ++ W QL +Q G A+A+ IRQ
Sbjct: 6 PELAFQLALGHRQAGRLPDAEALLRQIVAVQPNHTSAWHQLGLVVLQLGRPAEAVDLIRQ 65
Query: 128 AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
A+ +P + +L L Y GD E+A S+ +L P + L GQ+
Sbjct: 66 AVALQPGNAALHSDLGVAYRMRGDLEEAITSFRNALRLHPGAGHTHRNLGDALLAAGQSE 125
Query: 188 RSIGILEEYLKVHPSDA 204
+I + P+DA
Sbjct: 126 EAIASYRSAIAAQPTDA 142
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 10/222 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G A +LL+++V + PN ++ LGL LG A D A L P ++AL
Sbjct: 20 GRLPDAEALLRQIVAVQPNHTSAWHQLGLVVLQLGRPAEAVDLIRQAVALQPGNAALHSD 79
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +GD +A+ R A+R P +L + G E+A SY P
Sbjct: 80 LGVAYRMRGDLEEAITSFRNALRLHPGAGHTHRNLGDALLAAGQSEEAIASYRSAIAAQP 139
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILMENNAYEKT 225
+ A ++L GQ + + + + P A ++ D+L + + E+
Sbjct: 140 TDAGAHNNLGNVYLHLGQLEDAAACYQRAVDLEPRLIQAQSNLGDMLTKL----DRPEEG 195
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
L + + + E L + G+ Y R+G+ +AE +
Sbjct: 196 LVCAQRVLALDPNFAEGHLNM----GVAYWRMGHFAEAETCY 233
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG LQ G +A+ L+++ V L P ++ LG+A+ G+ + A + A L
Sbjct: 46 LGLVVLQL--GRPAEAVDLIRQAVALQPGNAALHSDLGVAYRMRGDLEEAITSFRNALRL 103
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P + L + G + +A+ R AI A+P D +L + Y+ +G E AA
Sbjct: 104 HPGAGHTHRNLGDALLAAGQSEEAIASYRSAIAAQPTDAGAHNNLGNVYLHLGQLEDAAA 163
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y++ L P + A + K + + + L + P+ A+
Sbjct: 164 CYQRAVDLEPRLIQAQSNLGDMLTKLDRPEEGLVCAQRVLALDPNFAE 211
>gi|428217456|ref|YP_007101921.1| hypothetical protein Pse7367_1196 [Pseudanabaena sp. PCC 7367]
gi|427989238|gb|AFY69493.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 275
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V +++ +A ++ G++E AI + + L PNL Y G A + NH A+ Y
Sbjct: 7 VKRLVEQAQARFEQGDYEGAIDDCDQAIALDPNLASAYICRGRARKKINNHLGAYKDYTK 66
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L ++ ++ + + Q GD A + + +P DI LA +GD
Sbjct: 67 AIELDQNNAVIYSLRASLSDQLGDQDGAFRDYTKVVELDPTDIDAYDGLAWIRFSMGDTN 126
Query: 154 KAAESYEQ 161
A Y Q
Sbjct: 127 DALSIYAQ 134
>gi|388841092|gb|AFK79142.1| hypothetical protein PCC8801_1300 [uncultured bacterium F39-01]
Length = 645
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ A+ K+ VR+ P E +N +G + + N + A Y A L P +S + L
Sbjct: 199 FDDALKAFKDAVRIKPGWGEAHNAIGDTYLGMSNFQDAARAYQQAVRLEPTNSTAYSNL- 257
Query: 110 TFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+A+ + G + ++ +R A+R + D +L + + G Y++A E++ +L P+
Sbjct: 258 GYALDRLGRSNDSIEALRNAVRLKGDDAVAYNNLGASLYKAGRYQEAIEAFGNAVRLNPN 317
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+V+A + Q R++ ++ ++V D
Sbjct: 318 DVEALNNLGAAYYVTAQYDRALQNFQQAVRVKADSPD 354
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 142/378 (37%), Gaps = 56/378 (14%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+ + Y G F QAI+ + ++++P YN LG A+ L + A + + L
Sbjct: 121 QGNTYYDLGQFAQAITAYENALKVTPQDAVIYNNLGAAYFGLNKNNEAAQAFSKSIALKA 180
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
D+ + L A+ + A+R +P + Y+ + +++ AA +Y
Sbjct: 181 DDADAYFNLGIAYSSMDKFDDALKAFKDAVRIKPGWGEAHNAIGDTYLGMSNFQDAARAY 240
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA--------------- 204
+Q +L P N A + G++ SI L +++ DA
Sbjct: 241 QQAVRLEPTNSTAYSNLGYALDRLGRSNDSIEALRNAVRLKGDDAVAYNNLGASLYKAGR 300
Query: 205 -----------------DLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLK 247
D+ ++ L A Y++ LQ+ + A V+ + L
Sbjct: 301 YQEAIEAFGNAVRLNPNDVEALNNLGAAYYVTAQYDRALQNFQQAVRVKADSPDAQYNL- 359
Query: 248 VKAGICYLRLGNMEKAEILFAD-LQWKNAIDHADLITEVADTLMSLGHSNSAL----KYY 302
G Y G +A + +Q K D+ + T + L++LG + A+ +
Sbjct: 360 ---GNAYYMTGKYREATAAYRQAIQLK--ADYVEARTNLGSLLIALGENQEAITELNESI 414
Query: 303 HFLETNAGTDN--GYLYLKLAECYLSLKERAHAIMFFYKALDRFE-------DNIDARLT 353
N N GY +KL E A A +F +A+D ++ D I A
Sbjct: 415 RLRRDNPVAHNNLGYANVKLGESLAP----AAATEYFRRAVDSYQEALRLRPDYIKALNN 470
Query: 354 LASLLLEEAKEEEAITLL 371
L ++ + + +EA+ +L
Sbjct: 471 LGAVYNKLGQYQEAVDVL 488
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G F +A++ L++ VRL P+ E YN+LG A A + Y A L P +
Sbjct: 510 YNRGQFNEAVTSLQQAVRLKPDYAEAYNSLGSALYKAQQFDPAIEAYKKALSLKPGTAET 569
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L T + +A ++A+R +P +LA YV + D + A + Y +++
Sbjct: 570 NNNLGTVYFRTKRYPEAAGSFKEAVRLKPDYGEAHFNLALTYVALNDRKGALDQYNKLKA 629
Query: 165 L 165
+
Sbjct: 630 V 630
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 67/152 (44%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F +A+ +E +RL P+ + N LG ++ LG ++ A D A + + L
Sbjct: 447 FRRAVDSYQEALRLRPDYIKALNNLGAVYNKLGQYQEAVDVLRRAVQGNADFAEAQYNLG 506
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T +G +A+ ++QA+R +P L S + ++ A E+Y++ L P
Sbjct: 507 TALYNRGQFNEAVTSLQQAVRLKPDYAEAYNSLGSALYKAQQFDPAIEAYKKALSLKPGT 566
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ ++ + + + G +E +++ P
Sbjct: 567 AETNNNLGTVYFRTKRYPEAAGSFKEAVRLKP 598
>gi|337266837|ref|YP_004610892.1| sulfotransferase [Mesorhizobium opportunistum WSM2075]
gi|336027147|gb|AEH86798.1| sulfotransferase [Mesorhizobium opportunistum WSM2075]
Length = 593
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
G+ + + +A + G ++A ++ ++V+ P + LGL G D
Sbjct: 44 GLDQYVQQALQLHQAGRRQEAEAIYRQVLARQPKHAAAAHFLGLLLHQTGRSDEGLDLIE 103
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
+ L P + T G A A+ + R A+ P ++ R +L S ++G +
Sbjct: 104 QSVQLQPTNPDFLNNFGTVMRDLGRPAAAIDFFRGAVDLRPDQLAARDNLGSSLKQVGQF 163
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
E+A E Y P +V A A+ + G+ ++ + E L + P DADL
Sbjct: 164 EEAEEIYRGTVARNPFHVRARIGLAETLQEAGRLDEALAVFSEALTIRPKDADL 217
>gi|254580948|ref|XP_002496459.1| ZYRO0D00572p [Zygosaccharomyces rouxii]
gi|238939351|emb|CAR27526.1| ZYRO0D00572p [Zygosaccharomyces rouxii]
Length = 785
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSP--NLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
LG A G +QAIS R P +LP + LG+ + AL A +++ +A
Sbjct: 535 LGFAHTYAIEGEQDQAISAYSTAARFFPGIHLPNLF--LGMQYMALNTFSLAEEYFTLAY 592
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA-------EPKDISLRIHLASFYVE 148
P+D L ++ ++ D +A Y+++A+ A +S++++LA Y
Sbjct: 593 DTCPQDPLLLNEMGVMYFKRNDLHKAKRYLKRALEAVKELNPTSRTSVSIQMNLAHAYRR 652
Query: 149 IGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+G+ E+A + ++ + ++ + D + L+LK + R+I L L + PS+
Sbjct: 653 LGENERAIKCFKTVLEVSSKDSDTYCSLGFLYLKTKELQRAIDHLHTALSLKPSN 707
>gi|451819922|ref|YP_007456123.1| TPR repeat-containing protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785901|gb|AGF56869.1| TPR repeat-containing protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 759
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI + + L+P+ + YN G A LG ++ A + Y A LSP +
Sbjct: 568 GQNEEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKELSPDYVNAYYN 627
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T + G +A+ +AI P ++ + + +G E+A E Y++ +L P
Sbjct: 628 KGTALMNLGQDEEAIGCYDKAIELSPDYVNAYNNKGTALKNLGQNEEAIECYDKAIELSP 687
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D V+A + GQ +I ++ ++++P
Sbjct: 688 DYVNAYNNKGNVLQNLGQNEEAIECYDKAIELNP 721
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 59 EVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDT 118
E++ N + Y GL G ++ A + Y A L P + ++ G
Sbjct: 511 EIINTDINNAKAYFVKGLTLRKSGQNEEAIECYNKAIELKPDYAEVYNNKGNILQDLGQN 570
Query: 119 AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQ 178
+A+ +AI P + + S +G E+A E Y++ ++L PD V+A
Sbjct: 571 EEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKELSPDYVNAYYNKGT 630
Query: 179 LFLKCGQTARSIGILEEYLKVHP 201
+ GQ +IG ++ +++ P
Sbjct: 631 ALMNLGQDEEAIGCYDKAIELSP 653
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 49/121 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI + LSP+ Y G A LG + A Y A LSP +
Sbjct: 602 GQNEEAIECYDKAKELSPDYVNAYYNKGTALMNLGQDEEAIGCYDKAIELSPDYVNAYNN 661
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T G +A+ +AI P ++ + + +G E+A E Y++ +L P
Sbjct: 662 KGTALKNLGQNEEAIECYDKAIELSPDYVNAYNNKGNVLQNLGQNEEAIECYDKAIELNP 721
Query: 168 D 168
D
Sbjct: 722 D 722
>gi|383777936|ref|YP_005462502.1| hypothetical protein AMIS_27660 [Actinoplanes missouriensis 431]
gi|381371168|dbj|BAL87986.1| hypothetical protein AMIS_27660 [Actinoplanes missouriensis 431]
Length = 255
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G E AI+ EV RL P ET+ +GL+ ALG + +A A LSP+ SA
Sbjct: 25 AAGRNEDAIAAFLEVTRLQPGHAETFYRIGLSLRALGQNPTAVTALDHAVRLSPRHSAAH 84
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ L G A+A+ RQAI A+P ++ A ++G + A +++ +
Sbjct: 85 RLLGEIHADAGRPAEALAAYRQAIIADPSARGAYVNAAQLLFQLGRDDSALALFDEAIAI 144
Query: 166 FPDNVDATKTG-AQLFLKCGQTARSIGILEEYLKV 199
+V +T + +L G + IG E L+
Sbjct: 145 PATDVYGDRTELLRAYLNKGLSLVQIGRFAEGLEA 179
>gi|193216010|ref|YP_001997209.1| hypothetical protein Ctha_2311 [Chloroherpeton thalassium ATCC
35110]
gi|193089487|gb|ACF14762.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
Length = 595
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ I L+ V+L P+L + LG+A+ G A + + A +P+ + + L
Sbjct: 427 FQNIIEPLEHAVKLRPDLASAHFGLGMAYLETGLFGKAIEAFNQAVRFNPEFAQAFAGLG 486
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ ++ G +A + +AI+ +P+ + + L S +++ G+Y A +S+ I L P N
Sbjct: 487 SVYMKLGYKGEAKKALEEAIKLKPEFVDAHLQLGSLFIDEGEYALAIKSFNNITVLNPQN 546
Query: 170 VDATKTGAQLFLKCGQTARSIGILE 194
A QL+++ A ++ L+
Sbjct: 547 AQAHYLLGQLYIQTNDRAAAMKQLD 571
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 127/305 (41%), Gaps = 23/305 (7%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N +Q++ + SP+ + + LG A+ A GN + A Y A L+P++ + L
Sbjct: 81 NTQQSLLAFQAATSASPSCSKAFVGLGDAYVAQGNDQKAIAAYEQAIRLNPENVNAYDGL 140
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF-- 166
++ +A Y +AI+ +P S +I L+ ++ +++A +S Q L
Sbjct: 141 SLVYMKTWQYEKAALYAEKAIQYQPDLTSAQIRLSMAQFQLRQFQEAFQSMNIAQNLLKE 200
Query: 167 -----PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
PD+ DA K +L G + L +Y+ + D+ L+ +L IL +
Sbjct: 201 TLRHHPDSTDARKALGMAYLISGDWNSA---LSQYIVLKDQDSVLAA-ELYQEILSQKAE 256
Query: 222 YEKTLQHIE---HAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA-EILFADLQWK-NAI 276
E L+ E H + V+ +G+ + + G YLR EKA E A L+ K N +
Sbjct: 257 QELQLEFFESMLHKRDVKKAGR---FEANFQLGSAYLRKQEYEKAIEFYKAALEIKPNTV 313
Query: 277 DHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMF 336
D + + L + S LK L + +Y L Y S AI
Sbjct: 314 DALNALGVCYLNLERYNEAISVLK----LAIDYDPSKPQIYSNLGTAYFSSDRFQDAIAA 369
Query: 337 FYKAL 341
F KA+
Sbjct: 370 FEKAV 374
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 27/276 (9%)
Query: 117 DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTG 176
+T Q++ + A A P + L YV G+ +KA +YEQ +L P+NV+A
Sbjct: 81 NTQQSLLAFQAATSASPSCSKAFVGLGDAYVAQGNDQKAIAAYEQAIRLNPENVNAYDGL 140
Query: 177 AQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL-MENNAYEKTLQHIEHAQ-I 234
+ +++K Q ++ E+ ++ P DL+ + +++ + +++ Q + AQ +
Sbjct: 141 SLVYMKTWQYEKAALYAEKAIQYQP---DLTSAQIRLSMAQFQLRQFQEAFQSMNIAQNL 197
Query: 235 VRFSGKELPLKLKVKA--GICYLRLGNMEKAEILFADLQWKNAIDHADLITEVA------ 286
++ + + P + G+ YL G+ A + L+ ++++ A+L E+
Sbjct: 198 LKETLRHHPDSTDARKALGMAYLISGDWNSALSQYIVLKDQDSVLAAELYQEILSQKAEQ 257
Query: 287 ----DTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALD 342
+ S+ H K F E N +L YL +E AI F+ AL+
Sbjct: 258 ELQLEFFESMLHKRDVKKAGRF-EAN---------FQLGSAYLRKQEYEKAIEFYKAALE 307
Query: 343 RFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD 378
+ +DA L L + EAI++L D D
Sbjct: 308 IKPNTVDALNALGVCYLNLERYNEAISVLKLAIDYD 343
>gi|159026574|emb|CAO86506.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 447
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A+S +E +RL P+ ++ G + LG ++ A Y A L P A W
Sbjct: 20 GRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHN 79
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ ++AIR +P + +G YE+A +YE+ +L P
Sbjct: 80 KGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNGKGNQLANLGRYEEALSAYEEAIRLKP 139
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
D A G+ ++ EE +++ P
Sbjct: 140 DYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKPD 174
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 2/159 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A+S +E +RL P+ ++ G LG ++ A A L P W
Sbjct: 122 GRYEEALSAYEEAIRLKPDYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKPDYELAWAV 181
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPK-DISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
G +A+ +AIR +P +++ + + +G YE+A + E+ +L
Sbjct: 182 KGNQLANLGRYEEALSACEEAIRLKPDYEVAWAVK-GNQLANLGRYEEALSACEEAIRLK 240
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
PD A G+ ++ EE +++ P D
Sbjct: 241 PDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPDYED 279
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A+S +E +RL P+ + G + LG ++ A A L P W
Sbjct: 190 GRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWAV 249
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEP--KDISLR--IHLASFYVEIGDYEKAAESYEQIQ 163
G +A+ +AIR +P +D L L + Y YE+A +Y+++
Sbjct: 250 KGNQLANLGRYEEALSACEEAIRLKPDYEDAWLGKGYQLGNLYR----YEEAIAAYDEVI 305
Query: 164 KLFPDNVDATKTGAQLFLK 182
KL DN++A A + K
Sbjct: 306 KLKVDNIEAMYRKAMILKK 324
>gi|440684726|ref|YP_007159521.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428681845|gb|AFZ60611.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 364
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
E A+ E ++L+PN E Y LGLA G ++A Y A +SP +A L
Sbjct: 114 LELAVQEYGEAIKLNPNFGEAYYNLGLALQKQGQKEAAISAYRQALVVSPTMAAAHYNLG 173
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
++ +A+ +QAI + + + +LA + G E A +Y Q L P+N
Sbjct: 174 IVLYEQEQREEAIAAYQQAINLDGSNANAYFNLAIALQQEGQVENAIAAYRQTLTLNPEN 233
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A LF+ Q +I I ++ ++ +P +A
Sbjct: 234 TLAYNNLGSLFVIQNQPLEAIAIYQKAIRQNPKNA 268
>gi|389693671|ref|ZP_10181765.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
gi|388587057|gb|EIM27350.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
Length = 287
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 54 ISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
IS L +V++ +PN P YNT G A++ +GN+ SA + A L P + +
Sbjct: 50 ISSLSDVIQRNPNDPSAYNTRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYTNRALALR 109
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
Q QA+ ++I+A+P I A+ Y Y++A +L P++ +A
Sbjct: 110 QTSRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQEALADLNMATRLLPESAEAL 169
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ L+ + G ++I + + +P
Sbjct: 170 HSRGLLYQRQGMHQQAILDFDATIDRNP 197
>gi|390440879|ref|ZP_10229075.1| Periplasmic protein [Microcystis sp. T1-4]
gi|389835806|emb|CCI33201.1| Periplasmic protein [Microcystis sp. T1-4]
Length = 363
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ + L N + ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVRNGNYGEAIAVYERAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYDNAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ + L P+N A + + ++ ++ ++ L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWVLALDPNNQQAHEIMGKALIEQNKSTEALDFLQKSLQRFPNNSE 211
>gi|409992874|ref|ZP_11276040.1| hypothetical protein APPUASWS_17295 [Arthrospira platensis str.
Paraca]
gi|291565858|dbj|BAI88130.1| TPR domain protein [Arthrospira platensis NIES-39]
gi|409936249|gb|EKN77747.1| hypothetical protein APPUASWS_17295 [Arthrospira platensis str.
Paraca]
Length = 370
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++A+++ + V+L + + Y+ L + G+ ++A FY A L P+++ +
Sbjct: 59 GNMDEALNVYLQAVQLESSDAKIYSALAYVQALRGDFEAAAKFYRDAITLDPQNADFYYG 118
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + D A R+A + + +I+ + LA+ DY A E+Y+ L P
Sbjct: 119 LGYTLARLQDYPAAAQAYRRATQLQRDNINAHLGLAASLFRQQDYRGAIEAYQTALALEP 178
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N +A + +L+ G ++S+ L++ +++ P+ ++ + L +A L + +
Sbjct: 179 NNWEANASLGMAWLRQGNASQSLQFLQQAMELAPNQPNI-YLKLGIAYLEQGDRTAALDA 237
Query: 228 HIEHAQIVRFSGK 240
E A++ F+G+
Sbjct: 238 FQEAARLSPFNGE 250
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 41 ASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
ASL A+ GN Q++ L++ + L+PN P Y LG+A+ G+ +A D + AA L
Sbjct: 185 ASLGMAWLRQGNASQSLQFLQQAMELAPNQPNIYLKLGIAYLEQGDRTAALDAFQEAARL 244
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
SP + + Q+ + + AM +QA+ EP ++ + + + + DY A
Sbjct: 245 SPFNGEIQFQIGEIFRLQENFEGAMQAYQQALAMEPDLVAANMAIGEIQLRLRDYIGAIV 304
Query: 158 SYEQIQKLFPD 168
S+ + F D
Sbjct: 305 SFRRAADRFAD 315
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+ LG A+ + ++ AI + + L PN E +LG+A GN + F
Sbjct: 147 INAHLGLAASLFRQQDYRGAIEAYQTALALEPNNWEANASLGMAWLRQGNASQSLQFLQQ 206
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L+P ++ +L +++GD A+ ++A R P + ++ + + ++E
Sbjct: 207 AMELAPNQPNIYLKLGIAYLEQGDRTAALDAFQEAARLSPFNGEIQFQIGEIFRLQENFE 266
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
A ++Y+Q + PD V A ++ L+
Sbjct: 267 GAMQAYQQALAMEPDLVAANMAIGEIQLRL 296
>gi|307154454|ref|YP_003889838.1| hypothetical protein Cyan7822_4657 [Cyanothece sp. PCC 7822]
gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 434
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+++ AI +V+ ++P + E +N GLA S L +++ A + Y A L+PK++ +
Sbjct: 59 DYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPKEARYYNNR 118
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ GD+ A+ +AI PK + E+ DY +A + Q +L P
Sbjct: 119 GLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLDPK 178
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
N A G + E +++ PS A
Sbjct: 179 NATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIA 214
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GNF++ + + +RL P++ YN G+ LG++ + + L P + +
Sbjct: 194 GNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIEDLNRSTSLDPSEIKPYGN 253
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T + G +A+ Q IR +PK+ Y EIG +++A + Y Q L P
Sbjct: 254 RATVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNLNP 313
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 34/162 (20%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP-------- 99
G +++AI +V+R P Y G+ ++ +G+ + A D Y+ A +L+P
Sbjct: 262 GRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNLNPRLLITNFD 321
Query: 100 --------KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK-------DISLRIHLAS 144
K++ Q A+Q+ + Y+ R IR + K D +L I +
Sbjct: 322 VLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYRGAIEDYTLAIRFDN 381
Query: 145 FYV-----------EIGDYEKAAESYEQIQKLFPDNVDATKT 175
Y ++GD + A +Q LF DA K
Sbjct: 382 NYALAYNNRGVARYQVGDKQGAKADLQQAVILFQQQKDAAKV 423
>gi|344284581|ref|XP_003414044.1| PREDICTED: intraflagellar transport protein 88 homolog [Loxodonta
africana]
Length = 825
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + LG + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSRALSKLGELYDGEGDKSQAFQYYYESYRYFPSNIGVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 42/230 (18%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAAHLSPKDSA 103
+A G++E+A KE +R + E +GL + L A D F + A L
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 555
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L++ + + + D QA+ ++ Q I P D L Y GD +A + Y +
Sbjct: 556 LYQIANVYELME-DPNQAIEWLMQLISVVPTDSRALSKLGELYDGEGDKSQAFQYYYESY 614
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ FP N+ VI+ L A ++ E
Sbjct: 615 RYFPSNI------------------------------------GVIEWLGAYYIDTQFCE 638
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
K +Q+ E A +++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 639 KAIQYFERASLIQPT----QVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|427707826|ref|YP_007050203.1| hypothetical protein Nos7107_2446 [Nostoc sp. PCC 7107]
gi|427360331|gb|AFY43053.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 708
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS-ALWKQLLTF 111
A++ + ++L+PN YN G +H ALG+ + A Y +A + P +S A + + T
Sbjct: 336 ALADYNQALKLNPNYSSAYNNRGNSHYALGDKQRALADYNLAIKVDPGNSEAYYNRGNTR 395
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
A+ GD A+ QAI+ P + + + ++GDY+ A Y Q K+ P++
Sbjct: 396 AIL-GDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSS 454
Query: 172 A--TKTGAQLFLKCGQTARSIGILEEY---LKVHPSDAD 205
A + ++ +L Q G L +Y LK +P++A+
Sbjct: 455 AYNGRGNSRYYLGDKQ-----GALNDYTLALKANPNNAE 488
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 72/162 (44%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+ +Y G+++ AI+ + V+++PN YN G + LG+ + A + Y +A +P
Sbjct: 426 GNTRYDLGDYQGAIADYTQAVKINPNHSSAYNGRGNSRYYLGDKQGALNDYTLALKANPN 485
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
++ + D+ A+ +AI+ P + + + +G+ +KA Y
Sbjct: 486 NAEAYYNRGNARSDLKDSPAAIADYNEAIKLNPNYSAAYNGRGNAFYYLGEKQKALADYS 545
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
Q K +N +A ++ G +I + +K++P+
Sbjct: 546 QAIKSDANNSEAYYNRGNVYFDLGNKKGAISDYTQAIKINPN 587
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ + ++++PN YN G LG+++ A Y A ++P S+ +
Sbjct: 399 GDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSAYNG 458
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD A+ A++A P + + + ++ D A Y + KL P
Sbjct: 459 RGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAIKLNP 518
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+ A F G+ ++ L +Y + SDA+ S
Sbjct: 519 NYSAAYNGRGNAFYYLGEKQKA---LADYSQAIKSDANNS 555
>gi|407783796|ref|ZP_11130990.1| hypothetical protein P24_16175 [Oceanibaculum indicum P24]
gi|407199842|gb|EKE69856.1| hypothetical protein P24_16175 [Oceanibaculum indicum P24]
Length = 1103
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+ G A++ A G E A++L + ++++ P+ E N LG +G H + D A +
Sbjct: 647 LFGTANIAAATGQPESAVALYQTLLQIDPDSVEVINNLGSVLRKMGRHAESIDIVREAIN 706
Query: 97 LSPKDSALWKQLLTFAVQK---GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
P+++ LW + Q+ GD A+ + +A+R +P + A +G+ E
Sbjct: 707 RYPQEARLWHNIAATLSQRHEPGDIDNAILFYEEALRLDPSLPEPFSNYAMLQCILGNGE 766
Query: 154 KAAESYEQIQKLFPDN 169
K + + + +L PDN
Sbjct: 767 KGLDLHRKALELAPDN 782
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 42 SLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD 101
S ++ G+ + AI +E +RL P+LPE ++ + LGN + D + A L+P +
Sbjct: 723 SQRHEPGDIDNAILFYEEALRLDPSLPEPFSNYAMLQCILGNGEKGLDLHRKALELAPDN 782
Query: 102 SALWKQ-----LLTFAVQKG----------DTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
L L T +Q+G AQA+ Y R + +D+S + L S
Sbjct: 783 RQLQLNYAVDLLATGHIQEGWQRYEARLERGMAQAIDYRHGLPRWQGEDLSGKAILVSGE 842
Query: 147 VEIGD 151
+GD
Sbjct: 843 QGLGD 847
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
+ GD A+ ++ + A P D + A+ G E A Y+ + ++ PD+V+
Sbjct: 622 KSGDYVAALDIYQEILAANPIDKNALFGTANIAAATGQPESAVALYQTLLQIDPDSVEVI 681
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+ K G+ A SI I+ E + +P +A L
Sbjct: 682 NNLGSVLRKMGRHAESIDIVREAINRYPQEARL 714
>gi|443311355|ref|ZP_21040984.1| Tfp pilus assembly protein PilF [Synechocystis sp. PCC 7509]
gi|442778552|gb|ELR88816.1| Tfp pilus assembly protein PilF [Synechocystis sp. PCC 7509]
Length = 368
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 138/332 (41%), Gaps = 24/332 (7%)
Query: 23 RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG 82
+ SK +S + K+L + GN+ AI+L ++ +L N P ++ +G G
Sbjct: 34 KNSSKQAISQQLNKLLEQGRKLVDAGNWSGAIALYQKAAKLEKNNPRIFSGIGYLQGLKG 93
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
+ +A Y A L PK+ L + G+ A + I + + +
Sbjct: 94 DFAAAVVAYRQAVVLEPKNPDFHYALAYSLGKLGENTGAAEAYSRTIELDQNNPKAYLGF 153
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ G+Y A +YE+ L PDN A ++ L+ G++ +I L++ ++ P+
Sbjct: 154 GVIMLRQGNYNSAIAAYEKALALEPDNASAHGFLGEILLRQGRSMEAISALQKSAQIDPN 213
Query: 203 DADLSVIDLLVAILMENNAYEK--TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM 260
++ + ++ L A + N K TLQ + K P KV+ I GNM
Sbjct: 214 NSTV-LLSLADAWGKQGNETAKLLTLQQV---------AKLEPSNAKVQVAI-----GNM 258
Query: 261 --EKAEILFADLQWKNAID-HADLIT---EVADTLMSLGHSNSALKYYHFLETNAGTDNG 314
+ ++ A L ++ A+ +L+T + + L++ G A++ Y L NG
Sbjct: 259 LLTQNDLENAILAYEKALTVEPNLVTAQEAIGNILLARGELKPAIRAYKRLIV-LSPQNG 317
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
Y L ++ AI F +A + ++
Sbjct: 318 NAYYSLGVALQQQQQIPDAIAAFSRARELYQQ 349
>gi|428221447|ref|YP_007105617.1| hypothetical protein Syn7502_01402 [Synechococcus sp. PCC 7502]
gi|427994787|gb|AFY73482.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
Length = 316
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN EQAI+ + ++ +PNL + LGLA + +G K A + + L P + +
Sbjct: 67 GNLEQAIATFQLAIQKNPNLVAAHYNLGLALAQIGKPKEAIKAFYQSIQLKPDLAIAYSN 126
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG-------DYEKAAESYE 160
+ +++ GD A+ Y ++A P +LA Y +G D + A +
Sbjct: 127 IAAASLEVGDPTTAVLYGKKATELAP-------NLAIAYYNLGLGLKQQKDIKGAIAQLQ 179
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ + L P + L + G ++IG + L ++P A+ + +L AIL+++
Sbjct: 180 KSESLDPQSSQTAYNLGLLIQETGNFDQAIGYYRKALVINPKYAE-AYYNLAAAILLQSP 238
Query: 221 AYEKTLQHIEHA 232
EK Q I A
Sbjct: 239 PPEKITQRITEA 250
>gi|427708152|ref|YP_007050529.1| hypothetical protein Nos7107_2781 [Nostoc sp. PCC 7107]
gi|427360657|gb|AFY43379.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 539
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 22/170 (12%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G++ AI + +RL+PN+ Y A S LG+++ A + Y A ++P
Sbjct: 324 YQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQALKINP----- 378
Query: 105 WKQLLTFAVQKGDTAQAMYYI------RQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
+A+ + + Y++ +AI+ P+D + + +IGDYE A +
Sbjct: 379 -----NYAITYKNRGMSRYFLGYQQSFTKAIKINPQDAIAYKNRGNARADIGDYEGAIDD 433
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEY---LKVHPSDAD 205
Y Q+ + P + A G A G E+Y +K++P+ AD
Sbjct: 434 YTQVIAINPHDAHAYYNRGNARYDMGDNA---GAFEDYTQAIKINPNYAD 480
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++PN TY G++ LG +S + A ++P+D+ +K
Sbjct: 361 GDNQGAIEDYTQALKINPNYAITYKNRGMSRYFLGYQQS----FTKAIKINPQDAIAYKN 416
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD A+ Q I P D + + ++GD A E Y Q K+ P
Sbjct: 417 RGNARADIGDYEGAIDDYTQVIAINPHDAHAYYNRGNARYDMGDNAGAFEDYTQAIKINP 476
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
+ DA + + G +I ++ ++++ + L +
Sbjct: 477 NYADAYYNRGNVQSEIGDQQEAIADFQKAVELYRKEGKLDAL 518
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 8/159 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + AI+ + ++L N E Y GL++ LG++ A Y A ++ D+ + +
Sbjct: 259 GEYTDAIAHYSQALKLYQNDAEIYYQRGLSYYQLGDYAEAIADYSQAIQINLNDAKFYIK 318
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
Q GD A+ QAIR P + A +GD + A E Y Q K+ P
Sbjct: 319 RGLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQALKINP 378
Query: 168 DNVDATKTG--AQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ K ++ FL Q+ + +K++P DA
Sbjct: 379 NYAITYKNRGMSRYFLGYQQS------FTKAIKINPQDA 411
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 68 PETYNTLGLAHSAL--GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
P+ + + L H+ L G + A Y A L D+ ++ Q Q GD A+A+
Sbjct: 243 PQENDYIKLGHNCLVKGEYTDAIAHYSQALKLYQNDAEIYYQRGLSYYQLGDYAEAIADY 302
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
QAI+ D I ++GDY A + Y Q +L P+ A K A G
Sbjct: 303 SQAIQINLNDAKFYIKRGLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGD 362
Query: 186 TARSIGILEEYLKVHPSDA 204
+I + LK++P+ A
Sbjct: 363 NQGAIEDYTQALKINPNYA 381
>gi|218248390|ref|YP_002373761.1| hypothetical protein PCC8801_3643 [Cyanothece sp. PCC 8801]
gi|257060287|ref|YP_003138175.1| hypothetical protein Cyan8802_2471 [Cyanothece sp. PCC 8802]
gi|218168868|gb|ACK67605.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
gi|256590453|gb|ACV01340.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
Length = 406
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 5/181 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAY-----GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL 81
K +L P ++ E Y G+ + AI+ + +++ +L E Y GLA S L
Sbjct: 139 KPELHPKTVQLTAEEWFNLGYNKGESGDNQGAIADFNQAIKIKSDLAEAYYNRGLAKSNL 198
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
G+++ A Y A + P +A + GD A+ QAI +P D +
Sbjct: 199 GDYQGAISDYNQAIEIKPDYAAAYNNRGLTKYNLGDNQGAITDYTQAIEIKPDDADAYYN 258
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+GD + A Y Q K+ PD A G +I + +K+ P
Sbjct: 259 RGLAKYNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKYNLGDKQGAIADYNQAIKIKP 318
Query: 202 S 202
Sbjct: 319 D 319
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+++ AIS + + + P+ YN GL LG+++ A Y A + P D+ +
Sbjct: 199 GDYQGAISDYNQAIEIKPDYAAAYNNRGLTKYNLGDNQGAITDYTQAIEIKPDDADAYYN 258
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD A+ QAI+ +P + + + +GD + A Y Q K+ P
Sbjct: 259 RGLAKYNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKYNLGDKQGAIADYNQAIKIKP 318
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV 208
D A G +I + +K+ P AD +
Sbjct: 319 DYTLAYICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAYI 359
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+Y G+ + AI+ + + + P+ + Y GLA LG+ + A Y A + P +
Sbjct: 229 KYNLGDNQGAITDYTQAIEIKPDDADAYYNRGLAKYNLGDKQGAIADYNQAIKIKPDYAT 288
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ GD A+ QAI+ +P I +GD + A Y Q
Sbjct: 289 AYNNRGNAKYNLGDKQGAIADYNQAIKIKPDYTLAYICCGLAKSNLGDNQGAITDYNQAI 348
Query: 164 KLFPDNVDA 172
K+ PD DA
Sbjct: 349 KIKPDYADA 357
>gi|407771446|ref|ZP_11118803.1| hypothetical protein TH3_18143 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407285551|gb|EKF11050.1| hypothetical protein TH3_18143 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 507
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 24/187 (12%)
Query: 16 LNKKRGRRKGS---KNKLSPGV-------TKMLGEASLQYAYGNFEQAISLLKEVVRLSP 65
L++ RG GS ++ +P + +++ A + G ++AI+L V+R +P
Sbjct: 29 LDQMRGDEPGSASLSSRPAPDIAVNRSDKSELFARALEAHQAGRIDEAIALYGAVLRQNP 88
Query: 66 NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
+ P+ +N LG+A H ++ Y AA L P ++ LW + G+ + M
Sbjct: 89 DQPDVWNNLGVALRRSKRHDASLVAYRRAAELRPGNAGLWSNM-------GNCLREMMRF 141
Query: 126 RQAIRAEPK----DISLRIH---LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQ 178
+A A K D S++ H + + +E+A ++ + PD VDA A
Sbjct: 142 EEATAAHDKALELDASIKSHPFNAGLVFRDTNRFEQAIRHFDAALAIDPDYVDANWDKAL 201
Query: 179 LFLKCGQ 185
L GQ
Sbjct: 202 ALLAMGQ 208
>gi|348583351|ref|XP_003477436.1| PREDICTED: intraflagellar transport protein 88 homolog [Cavia
porcellus]
Length = 825
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSKALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+N D
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENAD 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 42/230 (18%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAAHLSPKDSA 103
+A G++E+A KE +R + E +GL + L A + F + A L
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALECFLKLHAILRNSAQV 555
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L++ + + + D QA+ ++ Q I P D L Y GD +A + Y +
Sbjct: 556 LYQIANVYELME-DPNQAIEWLMQLISVVPTDSKALSKLGELYDSEGDKSQAFQYYYESY 614
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ FP N++ VI+ L A ++ E
Sbjct: 615 RYFPSNIE------------------------------------VIEWLGAYYIDTQFCE 638
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
K +Q+ E A +++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 639 KAIQYFERASLIQPT----QVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|428302097|ref|YP_007140403.1| hypothetical protein Cal6303_5553 [Calothrix sp. PCC 6303]
gi|428238641|gb|AFZ04431.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 211
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++AI + ++++PN E YN G A LG+ + A Y A ++P D+ +
Sbjct: 36 GDKQRAIIDFNQAIKINPNYAEAYNNRGFARYELGDKQGAITDYTQAIKINPNDAEAYSN 95
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P D + ++GD + A Y Q K+ P
Sbjct: 96 RGIARSELGDKQGALADFNQAIKINPNDAEAYNNRGVVRSKLGDKQGAITDYTQAIKINP 155
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ A + + G +I ++ ++ D N YE+ ++
Sbjct: 156 NLAQAYNNRGVVRSELGDQQGAIQDFQKAGELLKQQGD-------------NAKYERVMK 202
Query: 228 HIEHAQIVR 236
IE Q +R
Sbjct: 203 LIEQIQNLR 211
Score = 48.5 bits (114), Expect = 0.010, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 60/131 (45%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+Y G+ + AI+ + ++++PN E Y+ G+A S LG+ + A + A ++P D+
Sbjct: 66 RYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKINPNDAE 125
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ + GD A+ QAI+ P + E+GD + A + +++
Sbjct: 126 AYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDFQKAG 185
Query: 164 KLFPDNVDATK 174
+L D K
Sbjct: 186 ELLKQQGDNAK 196
Score = 46.2 bits (108), Expect = 0.064, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 69/157 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ + ++++PNL Y G S LG+ + A + A ++P + +
Sbjct: 2 GDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNN 61
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ QAI+ P D + E+GD + A + Q K+ P
Sbjct: 62 RGFARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKINP 121
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
++ +A + K G +I + +K++P+ A
Sbjct: 122 NDAEAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLA 158
>gi|403214669|emb|CCK69169.1| hypothetical protein KNAG_0C00550 [Kazachstania naganishii CBS
8797]
Length = 1064
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+ P + ++L EA+ + + A L EV++ P Y TLG + G +
Sbjct: 129 VDPEIAQLLSEANEAFVRSDLPVAERLFNEVIKKDPRNFAAYETLGDIYQLQGRLNDCCN 188
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
+ +AAH++ D WK + + QA+Y + I +D A+ Y +I
Sbjct: 189 SWFLAAHINSSDIEFWKVVAILSADLEHYRQAIYCFSRVINLNKQDWETVYRRATLYKKI 248
Query: 150 GDYEKAAESYEQI 162
G KA E +++I
Sbjct: 249 GQTGKALEGFQKI 261
>gi|75906644|ref|YP_320940.1| hypothetical protein Ava_0419 [Anabaena variabilis ATCC 29413]
gi|75700369|gb|ABA20045.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 224
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 81/171 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ AI++ ++ + P ++ +G H+ GN ++A Y A ++P +S +
Sbjct: 53 GDYNGAIAVYQQAATMEPRNARIHSGIGYLHAQQGNFQAALASYRRAIAINPNNSDFFYA 112
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GDT A R+AI+ ++S + L +GD++ A ++EQ KL
Sbjct: 113 VGYIKGNMGDTPGAKEAYRRAIQLNRNNVSAYVGLGITQSRMGDFQSANWAFEQAIKLDK 172
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
+N + A ++ + QT ++ +L++ ++ D + + A+L +
Sbjct: 173 NNAQTYEFMAAMYKQRRQTKQASNLLQKARDLYQRRNDADGVARVEAMLQQ 223
>gi|396081885|gb|AFN83499.1| hypothetical protein EROM_080810 [Encephalitozoon romaleae SJ-2008]
Length = 803
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 6 YGGYRKKTRKLNKKRGRRKGSKNKLSPGVTK---MLGEASLQYAYGNFEQAISLLKEVVR 62
Y G+ + +R RRK S +K S + K ++ A+ Y + + +LKE +
Sbjct: 3 YAGWLNGEEEWLIRRTRRKSS-SKGSQRIIKAKNLIAIANNLYVRNELGKCVEILKEAIC 61
Query: 63 LSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAM 122
L P P Y TLGL G A+ + +AAHL + LW++L ++ Q G + +
Sbjct: 62 LMPRNPHPYFTLGLIFEEKGEIPKAYYCFFVAAHLQKNNYGLWRKLYDYSRQLGYNRERI 121
Query: 123 YYI 125
Y+I
Sbjct: 122 YFI 124
>gi|395848202|ref|XP_003796745.1| PREDICTED: intraflagellar transport protein 88 homolog [Otolemur
garnettii]
Length = 806
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 552 QAIEWLMQLISVVPTDSRVLSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 611
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 612 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 671
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 672 CLRFLVRLCTDIG 684
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A ++E+A KE +R + E +GL + L A D ++ + + +
Sbjct: 477 FANADYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 536
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D QA+ ++ Q I P D + L Y GD +A + Y + +
Sbjct: 537 LYQIANVYELMEDPNQAIEWLMQLISVVPTDSRVLSKLGELYDSEGDKSQAFQYYYESYR 596
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 597 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 620
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A +++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 621 AIQYFERASLIQPT----QVKWQLMVASCFRRSGNYQKALDTYKDIHRK 665
>gi|350559481|ref|ZP_08928321.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781749|gb|EGZ36032.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 326
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 42 SLQYAYGN---FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
+L + YG +E+A+ L V L+P + ++ LG A G + A L+
Sbjct: 43 NLGFIYGQQQRWEEALRHLGRAVELAPGMAMAHSNLGQVLVARGAAEQGLTHLDRATRLA 102
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P + +W L + GD A A+ ++A+R P D L L + G ++A +
Sbjct: 103 PGEVQVWDNLARNRLHLGDAAGAVEAWQEAVRLVPGDPRLLSRLGTAMAACGLLDQAIDR 162
Query: 159 YEQIQKLFPDNVDA-TKTGAQLFLK 182
+ + ++ P +VDA + G LFL+
Sbjct: 163 FRSLLEVEPRHVDAWVQLGITLFLR 187
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 1/169 (0%)
Query: 28 NKLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+L+PG ++ A + G+ A+ +E VRL P P + LG A +A G
Sbjct: 99 TRLAPGEVQVWDNLARNRLHLGDAAGAVEAWQEAVRLVPGDPRLLSRLGTAMAACGLLDQ 158
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A D + + P+ W QL + D A + QA+ P D+S HL
Sbjct: 159 AIDRFRSLLEVEPRHVDAWVQLGITLFLRKDLGSARDALLQALALAPSDLSALRHLGLVQ 218
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+ G+ A ++++ + +L D A L L GQ ++ L E
Sbjct: 219 LACGEQRDALQTFDALYRLDARQFDNRLDLAVLLLSQGQAPDALAHLRE 267
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 6/203 (2%)
Query: 22 RRKGSKNKLSPGVTKM---LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
R G +L+PG+ LG+ + A G EQ ++ L RL+P + ++ L
Sbjct: 59 RHLGRAVELAPGMAMAHSNLGQ--VLVARGAAEQGLTHLDRATRLAPGEVQVWDNLARNR 116
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
LG+ A + + A L P D L +L T G QA+ R + EP+ +
Sbjct: 117 LHLGDAAGAVEAWQEAVRLVPGDPRLLSRLGTAMAACGLLDQAIDRFRSLLEVEPRHVDA 176
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
+ L D A ++ Q L P ++ A + + L CG+ ++ + +
Sbjct: 177 WVQLGITLFLRKDLGSARDALLQALALAPSDLSALRHLGLVQLACGEQRDALQTFDALYR 236
Query: 199 VHPSDADLSVIDLLVAILMENNA 221
+ D + +DL V +L + A
Sbjct: 237 LDARQFD-NRLDLAVLLLSQGQA 258
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 70/184 (38%), Gaps = 8/184 (4%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
G ++ + GV L G E A S + + L + +N LG +
Sbjct: 3 GPRDHIEEGVRHHLA--------GELEAAASAYRAALELEADNATAHNNLGFIYGQQQRW 54
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
+ A A L+P + L V +G Q + ++ +A R P ++ + +LA
Sbjct: 55 EEALRHLGRAVELAPGMAMAHSNLGQVLVARGAAEQGLTHLDRATRLAPGEVQVWDNLAR 114
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ +GD A E++++ +L P + CG ++I L+V P
Sbjct: 115 NRLHLGDAAGAVEAWQEAVRLVPGDPRLLSRLGTAMAACGLLDQAIDRFRSLLEVEPRHV 174
Query: 205 DLSV 208
D V
Sbjct: 175 DAWV 178
>gi|282164261|ref|YP_003356646.1| hypothetical protein MCP_1591 [Methanocella paludicola SANAE]
gi|282156575|dbj|BAI61663.1| hypothetical protein [Methanocella paludicola SANAE]
Length = 805
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +AI+LLKEV + + E +N LG A++A + +A + A + P + A+ K
Sbjct: 247 GKYTEAIALLKEVAVKNSHRIEVHNELGAAYAATHDLNNAIAEFNEALKIEPANMAV-KG 305
Query: 108 LLTFAV-QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
LL A+ QKG A+ +++AI P D L +L Y + G A Y + +L
Sbjct: 306 LLGLALTQKGALDDAIAVLKEAIPLSPDDPQLHFYLGLAYQKKGYTPNAVNEYRKTIELN 365
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTL 226
PD+ DA + K + ++ ++E ++++ + D+ +A++ + YE +L
Sbjct: 366 PDHADAHGNLGVVLRKRKKVNEALKEIKEAIRLNHYNG-FKHYDMGMALMDKGLPYEASL 424
Query: 227 Q 227
+
Sbjct: 425 E 425
>gi|386346743|ref|YP_006044992.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339411710|gb|AEJ61275.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 654
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK--DSALWK 106
++ +AI L ++ ++ +P + Y L A+ +LG ++ A A L P+ DS L
Sbjct: 37 DYHRAIELYQQAIQKNPAFVQAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTDSHLLY 96
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
A+ + + A+ +Y R + EP+++ + +A + G A YE+ ++F
Sbjct: 97 ARCLLALGRLEEAERIY--RDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRMF 154
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
P++ A L+ G+ ++ LEE L+++PSD ++ ++
Sbjct: 155 PEHKKILTILAFLYEYRGERDKAASYLEEALRLYPSDPEVHLL 197
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 159/412 (38%), Gaps = 52/412 (12%)
Query: 83 NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
++ A + Y A +P +K L G A+ +A +P+ +
Sbjct: 37 DYHRAIELYQQAIQKNPAFVQAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTDSHLLY 96
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
A + +G E+A Y I P NV+A A+L L GQ A ++ E L++ P
Sbjct: 97 ARCLLALGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRMFPE 156
Query: 203 DADLSVIDLLVAILME-NNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNME 261
+ I +A L E +K ++E A + S E+ L A +LR +
Sbjct: 157 HKKILTI---LAFLYEYRGERDKAASYLEEALRLYPSDPEVHL----LAASSHLRKEEWD 209
Query: 262 KAE-----ILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH-FLETNAGTDNGY 315
+AE L D +NA++ + L+ +VA G AL + FL + G+
Sbjct: 210 EAEREARRALTLD---ENAVEASYLLAQVA---TGKGRFQEALDHLDGFLGARPDSREGW 263
Query: 316 LYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPK 375
YLK L ++ F + L+R+ D+ AR + +LLE S P+
Sbjct: 264 -YLK-GVVLDRLDRPEESLRAFREVLERYPDDEVARYAMERILLERFPA-------SAPE 314
Query: 376 DLDSLDMNSDKSNPWW--------------------LNEKIIMKLCHIYRAKGMPEDFVD 415
+ D + ++ + + + ++ + R G P +VD
Sbjct: 315 RRTAADYHFTQAGEYAEKFYFQRAYHFLRRGLRLFPYDAEANLEFAELQRRMGFPHKYVD 374
Query: 416 AIFPLVCESLCVEALRQKVKVKRRLTKGILQQRTKIYN---NLPTDSILCGI 464
+ +V + + + +++V RR+ + + R + P+ IL G+
Sbjct: 375 RLEFMVSSGIADQHVEDRLEVARRMLEEDVPSRWGVNPFDLTPPSIGILVGL 426
>gi|327269026|ref|XP_003219296.1| PREDICTED: intraflagellar transport protein 88 homolog [Anolis
carolinensis]
Length = 820
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P LG + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSHALAKLGELYDNEGDKSQAFQYYFESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A++Y +A +P + ++ +AS Y G+Y+KA ++Y+ I + FPDN +
Sbjct: 631 YIDTQFCEKAIHYFERAALIQPTQVKWQLMVASCYRRSGNYQKALDTYKMIHRKFPDNAE 690
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 81/219 (36%), Gaps = 40/219 (18%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+ G++E+A KE +R + E +GL L A D ++ + + +
Sbjct: 496 FVNGDYEKAAEFYKEALRNDSSCTEALYNIGLTLKKLNRLDEALDSFLKLHAILRNSAQV 555
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ + D QA+ ++ Q I P D L Y GD +A + Y + +
Sbjct: 556 LFQIASIYELMEDPNQAIEWLMQLISVVPTDSHALAKLGELYDNEGDKSQAFQYYFESYR 615
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 616 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 639
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ + E A +++ + +K ++ CY R GN +KA
Sbjct: 640 AIHYFERAALIQPT----QVKWQLMVASCYRRSGNYQKA 674
>gi|440684825|ref|YP_007159620.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428681944|gb|AFZ60710.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 279
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN E AI+ + +RL+PN ETYN G A ++LG+ ++A Y A L+P + +
Sbjct: 107 GNKEGAIADYNQALRLNPNDGETYNNRGNARASLGDQQAAIADYNEAIRLAPNYAEAFNN 166
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+GD A+ +AIR + + + Y GD +KA Y Q +L P
Sbjct: 167 RGNARSAQGDKNGAVADYTEAIRIDQNYSVAYNNRGNTYFAQGDQQKAIADYNQAIRLNP 226
Query: 168 D 168
+
Sbjct: 227 N 227
>gi|323447882|gb|EGB03789.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
Length = 971
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 62/152 (40%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A+ L+ ++L PN P+ YN LG A +L + + A Y A L P + L T
Sbjct: 288 EGAVRALRHAIQLEPNFPDAYNNLGNALRSLAHMREAIACYRTALRLKPDHPHAYSNLGT 347
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+G +A++ A R P +L S E G ++A Y Q L PD
Sbjct: 348 AMRDRGLIREAIHCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALDPDFA 407
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+A + + Q +I LK+ P
Sbjct: 408 EAYTNLGNTYRELCQFEDAIKCYTTALKIAPG 439
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 2/174 (1%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P LG A A+ +AI+ + +RL P+ P Y+ LG A G + A
Sbjct: 305 PDAYNNLGNALRSLAH--MREAIACYRTALRLKPDHPHAYSNLGTAMRDRGLIREAIHCN 362
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
V AA L P + L + ++G QA+ + QAI +P +L + Y E+
Sbjct: 363 VTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALDPDFAEAYTNLGNTYRELCQ 422
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+E A + Y K+ P +A A + G +I E L + P D
Sbjct: 423 FEDAIKCYTTALKIAPGLAEAHAALAAVHGDGGNYEDAIICFERALALKPHFPD 476
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%)
Query: 59 EVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDT 118
+ +R+ P + E Y+ L A LG++ FY+ A P+ + L T + G
Sbjct: 92 DAIRIEPQMAEAYSNLANALKELGDYPGTLRFYLKAIKYKPRFGDAYNNLATAHMHLGQV 151
Query: 119 AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQ 178
+ A+ + + +P + +L + G E A Y + +L P A A
Sbjct: 152 SDAIETYQMGLVIDPGLVDAHCNLGNLLKAQGKLEAARRCYLEAIRLNPAFAIAWSNLAG 211
Query: 179 LFLKCGQTARSIGILEEYLKVHPSDADL 206
LF GQ + +I E +++ P AD+
Sbjct: 212 LFKDEGQLSTAIAYYREAIRLCPPFADV 239
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 10/204 (4%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVV 61
EL +Y G + K K + R + N L A+ G AI + +
Sbjct: 113 ELGDYPGTLRFYLKAIKYKPRFGDAYNNL----------ATAHMHLGQVSDAIETYQMGL 162
Query: 62 RLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQA 121
+ P L + + LG A G ++A Y+ A L+P + W L +G + A
Sbjct: 163 VIDPGLVDAHCNLGNLLKAQGKLEAARRCYLEAIRLNPAFAIAWSNLAGLFKDEGQLSTA 222
Query: 122 MYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
+ Y R+AIR P + +L S E G+ +A + Y+ +L PD A L
Sbjct: 223 IAYYREAIRLCPPFADVYSNLGSAMQEQGNLIEAKQCYQTAIRLRPDFAIAHGNLGSCLL 282
Query: 182 KCGQTARSIGILEEYLKVHPSDAD 205
++ L +++ P+ D
Sbjct: 283 TSHDAEGAVRALRHAIQLEPNFPD 306
>gi|124021994|ref|YP_001016301.1| hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT
9303]
gi|123962280|gb|ABM77036.1| Hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT
9303]
Length = 837
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 140/335 (41%), Gaps = 28/335 (8%)
Query: 45 YAYGNFEQAISL-LKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+A G+ +QA L LK + N Y LG+ + G+ K + Y A ++P
Sbjct: 33 HAQGDIQQAKLLYLKSIANGLEN-ESLYTNLGVIYKNEGDFKESGRCYRSALRINPFSCD 91
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ L + A+ + + A+ +AI+ P ++ +E+GD E+A S +
Sbjct: 92 AYTNLSSLAIAENEFTSALDLANKAIKLNPNCDVANLNAGKALLELGDLEQALASTLKSL 151
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+L PDN A ++ G+ +++ +YL++ P + D LM
Sbjct: 152 ELQPDNHTAHMNLGSIYQDLGELDQALASTIKYLELKPDNPD---------ALMNLGGIY 202
Query: 224 KTLQHIEHAQIVRFSGKELPLK-----LKVKAGICYLRLGNMEKA---EILFADLQWKNA 275
K L ++ A + + K L +K + G+ Y LGN+++A + +LQ N
Sbjct: 203 KDLGQLDQA--LASTLKNLEIKPDNPTAHMNLGVIYKDLGNLDQALTSTLKSLELQPDNH 260
Query: 276 IDHADLITEVADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAI 334
H +L + D LG+ + AL LE DN L Y L A+
Sbjct: 261 TAHMNLGSIYQD----LGNLDQALTSTLKSLELK--RDNPDALTNLGGIYKDLGNLDQAL 314
Query: 335 MFFYKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
K+L+ +N DA L + E+ + ++A+T
Sbjct: 315 TSTLKSLELKPNNPDALTNLGGIYKEQGQLDQALT 349
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN +QA++ + + L + P+ LG + LGN A + + L P +
Sbjct: 274 GNLDQALTSTLKSLELKRDNPDALTNLGGIYKDLGNLDQALTSTLKSLELKPNNPDALTN 333
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++G QA+ ++A PK++ H+A+ + D K
Sbjct: 334 LGGIYKEQGQLDQALTAYKKASTLAPKELR---HVAASTLFFSDLHKDN----------- 379
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEE----------YLKVHPSDADLSVIDLLVAILM 217
D +++ +T + +K Q ARS +E+ ++ H D D +++ L L
Sbjct: 380 DEINSERTAYRQGIK--QLARSSTEMEQPKSSYSTDMFWIAYHNRDDDREILESLGRALA 437
Query: 218 ENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGIC--YLR 256
+LQ + + +G+ L + K++ GIC YLR
Sbjct: 438 -------SLQKGTLTKAISGAGRNLASRGKIRLGICSDYLR 471
>gi|75908225|ref|YP_322521.1| hypothetical protein Ava_2004 [Anabaena variabilis ATCC 29413]
gi|75701950|gb|ABA21626.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 236
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTL 74
KL+ + +G ++ G + S Q GN+ +AI+LL +++ P+ YN
Sbjct: 24 KLDPQENGARGDESGFGDGYLRSCALRSAQQ--GNYSEAIALLNQLINRHPDNAVDYNNR 81
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
GL + G+ + A Y A HL+P ++ + + G A A+ +AI P+
Sbjct: 82 GLIYFQCGHTQKAIQDYNTALHLNPDLASAYNNRANYYAACGQLAAALADYDRAIDLNPR 141
Query: 135 DISLRIHLASFYVEIGDYEKAAESYE 160
+ I+ ++G+Y++A E+++
Sbjct: 142 HVRAWINRGITLRDLGEYDQAIENFD 167
>gi|425469576|ref|ZP_18848499.1| Periplasmic protein [Microcystis aeruginosa PCC 9701]
gi|389880545|emb|CCI38704.1| Periplasmic protein [Microcystis aeruginosa PCC 9701]
Length = 363
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++L +A GN+ +AI++ + L N + ++ +G + G++ +A Y
Sbjct: 40 VNELLRQARQLVRNGNYGEAIAVYERAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQK 99
Query: 94 AAHLSPKDSALWKQLLTFAVQKGD---TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L P + + L GD A A YY AI+ EPK++ + L +
Sbjct: 100 ALSLDPSNPDFFHALGYSLANIGDYDNAATAYYY---AIQIEPKNVQHYLGLGVVLLRQK 156
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+Y KA E Y+ + L P+N A + + ++ ++ ++ L++ L+ P++++
Sbjct: 157 NYAKAGEVYQWVLALDPNNQQAHEIMGKALIEQNKSTEALDFLQKSLQRFPNNSE 211
>gi|430761410|ref|YP_007217267.1| TPR repeat protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430011034|gb|AGA33786.1| TPR repeat protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 318
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 42 SLQYAYGN---FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
+L + YG +E+A+ L V L+P + ++ LG A G + A L+
Sbjct: 43 NLGFIYGQQQRWEEALRHLNRAVELAPGMAMAHSNLGQVLVARGAGEQGLKHLDRATELA 102
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P + +W L + GD A A+ ++A+R P D L L + G ++A +
Sbjct: 103 PGEVQVWDNLARNRLHLGDAAGAVEAWQEAVRLVPGDPRLLTRLGTAMAACGLLDQAIDR 162
Query: 159 YEQIQKLFPDNVDA-TKTGAQLFLK 182
+ ++ P +VDA + G LFL+
Sbjct: 163 FRSALEVEPRHVDAWVQLGITLFLR 187
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Query: 28 NKLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+L+PG ++ A + G+ A+ +E VRL P P LG A +A G
Sbjct: 99 TELAPGEVQVWDNLARNRLHLGDAAGAVEAWQEAVRLVPGDPRLLTRLGTAMAACGLLDQ 158
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
A D + A + P+ W QL + D A + QA+ P D+S HL
Sbjct: 159 AIDRFRSALEVEPRHVDAWVQLGITLFLRKDLGSAREALLQALALAPSDLSALRHLGLVQ 218
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+ G+ A ++++ + +L +D A L L GQ ++ L E
Sbjct: 219 LACGEQRDALQTFDALYRLDARQLDNRLDLAVLLLSQGQAPDALAHLRE 267
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 11/245 (4%)
Query: 29 KLSPGVTKM---LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
+L+PG+ LG+ + A G EQ + L L+P + ++ L LG+
Sbjct: 66 ELAPGMAMAHSNLGQ--VLVARGAGEQGLKHLDRATELAPGEVQVWDNLARNRLHLGDAA 123
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A + + A L P D L +L T G QA+ R A+ EP+ + + L
Sbjct: 124 GAVEAWQEAVRLVPGDPRLLTRLGTAMAACGLLDQAIDRFRSALEVEPRHVDAWVQLGIT 183
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
D A E+ Q L P ++ A + + L CG+ ++ + ++ D
Sbjct: 184 LFLRKDLGSAREALLQALALAPSDLSALRHLGLVQLACGEQRDALQTFDALYRLDARQLD 243
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
+ +DL V +L + A + L H+ +G E +++ + GN E+A+
Sbjct: 244 -NRLDLAVLLLSQGQAPD-ALAHLRELSEA-LAGNE---RVRFYLALALRETGNAEEAKE 297
Query: 266 LFADL 270
L A L
Sbjct: 298 LLAAL 302
>gi|386398767|ref|ZP_10083545.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
gi|385739393|gb|EIG59589.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
Length = 461
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E++++ E +RL P +PE Y+ GL+ +A+G + A Y A L+P+ + +
Sbjct: 223 GQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFANR 282
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ + KG+ A+ A++ EP + A Y ++G+ +KA YE +L P
Sbjct: 283 GDSYHL-KGELGAALSDYEAALKLEPNFAQTYNNRAVLYKKMGERKKALADYETALRLDP 341
Query: 168 DNVDAT 173
N +A
Sbjct: 342 GNDNAA 347
>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
Length = 1297
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 43/301 (14%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+ IS+ ++++++ PN + A+ +G +SA +F + A + P + LWK
Sbjct: 395 GQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRATEIEPSNIELWK- 453
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR------IHLASFYVEIGDYEKAAESYEQ 161
+ D A+ + ++ I A + IS+ + LA Y + Y+ A ++ E+
Sbjct: 454 ------LRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAKKTLER 507
Query: 162 IQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
KL D+ + ++ K G + E+ ++P+ N
Sbjct: 508 GLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPN----------------NKK 551
Query: 222 YEKTLQHI-----EHAQIVRFSGKELPL-----KLKVKAGICYLRLGNMEKAEILFADLQ 271
Y K L + ++ + V + K L L +L + GIC ++ E+A F D
Sbjct: 552 YWKNLAWVMEKLGKYNEAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSF-DSA 610
Query: 272 WKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERA 331
K + + E D+L+ LG+ + ALK + L ++ Y+Y + YL K+R
Sbjct: 611 LKLNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKR---AYLRFKKRE 667
Query: 332 H 332
+
Sbjct: 668 Y 668
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 75/161 (46%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y ++ A L+ ++L+ + E +N LG+ + LG+ ++A + A+ ++P +
Sbjct: 493 YIVSRYDDAKKTLERGLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKY 552
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
WK L + G +A+ Y +A++ +P D+ L +I YE+A +S++ K
Sbjct: 553 WKNLAWVMEKLGKYNEAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALK 612
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L + A +K G ++ I +K+ +++
Sbjct: 613 LNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERGNSE 653
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 39/196 (19%)
Query: 46 AYGNFE---QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
AY N + +AI+ LK+ +++ PN +++ LG+ + G ++ A + A + P D
Sbjct: 220 AYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDK 279
Query: 103 ALWK-QLLTFAVQKGDTAQAMYYIRQAIRAEPK--------------------------- 134
W + + + D+ +A+ I +A+ + K
Sbjct: 280 KSWYLEASVLHILERDS-EALKSINRALELDKKYESALLLRRDVAKKLKVYDELAAACVG 338
Query: 135 -------DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
D L LA Y G+ EKA I K P ++ K ++ K GQ
Sbjct: 339 LLDVGYEDTELMYDLALSYYHTGELEKAYNITLDILKSLPRHLPTLKLQKEIMKKKGQWE 398
Query: 188 RSIGILEEYLKVHPSD 203
R I I E+ LK+ P+D
Sbjct: 399 RVISICEDILKIEPND 414
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
++ + K+IS LA Y +G + A +Y ++FPDN LK +
Sbjct: 709 KEILTINKKNISAWRDLAVAYDSMGKVDSAIATYRDALEIFPDNDVLLYELKATLLKHNR 768
Query: 186 TARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLK 245
A +I + ++ L + P D D ++ DL A L++ YE +++ A + + + L L
Sbjct: 769 FADAIDVCKKILSIAPEDYD-NLRDLSSA-LIKLKKYEDAKEYLLRALELNKNAELLEL- 825
Query: 246 LKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFL 305
G Y L N A + D NA H + ++A +G A+K
Sbjct: 826 ----LGDTYYYLKNYTSAIEHYKDALNLNASPH--IYHKLAKAYYKVGDLQEAIK--SIE 877
Query: 306 ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEE 365
+ YL + YL + + A + KA + ED+ DAR+ LAS++ E K +
Sbjct: 878 RAIEWKKDAKFYLLGSRIYLKMGDLNSAYNYANKAFE-LEDSDDARINLASIMFELGKYD 936
Query: 366 EAITLLSPPKDLDSLD 381
+ I LL P ++LD
Sbjct: 937 DVIALLKPLGKNNNLD 952
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 52 QAISLLKEVVRLSPNLPETYNTL----GLAHSALGNHKSAFDFYVIAAHLSPKD-SALWK 106
++I+L+ E + L N E+++ L G+A +G K A + Y +A L P + SA
Sbjct: 41 RSINLINENLELIKNENESFSALLVNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTN 100
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ A+QK + +A Y I +A++ + + + A Y GD ++A + Y+++ K++
Sbjct: 101 YAMLLALQK-EYKKAAYIIEKALQIDRRSKEVWETKAEIYQLKGDIDEALDVYKKLIKMY 159
Query: 167 PDNV 170
PD +
Sbjct: 160 PDEI 163
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 32 PGVTKMLGEASLQ-YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
P ++L + +Q Y ++ + + ++K+VV ++ E + LG A++ + + A +
Sbjct: 174 PKDLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINA 233
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKD 135
A + P D W L ++G+ +A+ ++AI+ +P D
Sbjct: 234 LKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIKIDPND 278
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
G N L ++LG+A L+ A +E A+ + +VV + ++ +LG + L +
Sbjct: 946 GKNNNLDA--LRLLGKA-LE-AEERYEDAVKIYNKVVDIDKKDKSSWISLGRCYLTLNKY 1001
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQ-KGDTAQAMYYIRQAIRAEPKD 135
A + A+ + PKD A++ L+FA + G +A+ Y+ +A+ +P+D
Sbjct: 1002 NEAIKAFERASLIDPKDKAVY-TFLSFAYEGAGYLNKALNYVEKALELDPED 1052
>gi|425452050|ref|ZP_18831868.1| Periplasmic protein [Microcystis aeruginosa PCC 7941]
gi|389766333|emb|CCI08017.1| Periplasmic protein [Microcystis aeruginosa PCC 7941]
Length = 363
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ +AI++ ++ L N + ++ +G + G++ +A Y A L P + +
Sbjct: 54 GNYGEAIAIYEQAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQKALSLDPSNPDFFHA 113
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L GD A AI+ EPK++ + L + +Y KA E Y+ I L P
Sbjct: 114 LGYSLANIGDYDNAATSYYYAIQIEPKNVQHYLGLGVVLLRQKNYAKAGEVYQWILALDP 173
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+N A + + ++ +++ + L++ L+ P++++
Sbjct: 174 NNQQAHEIMGKALIEQNKSSEAFDFLQKSLQRFPNNSE 211
>gi|302818335|ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
gi|300141402|gb|EFJ08114.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
Length = 973
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 59/282 (20%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL-AHSALG------------- 82
+LG+A Q+ G F++++ L K V+++ P P + + L A ALG
Sbjct: 163 LLGQACAQFNRGRFQESLGLYKRVLQMHPGCPASLDPENLDALVALGIMDINANDAESVQ 222
Query: 83 --------------------NHKSAFDFY---------VIAAHLSPKDSALWKQLLTFAV 113
NH + FY ++ L+ D+AL K F +
Sbjct: 223 EGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVVEQLMETALASTDNALIKSQSYFNL 282
Query: 114 -----QKGDTAQAMYYIRQAIRA--EPKDISLRIH-LASFYVEIGDYEKAAESYEQIQKL 165
KGD +A Y R +++ PKD L + L +++ D + A ++E++ +
Sbjct: 283 ARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNFEKVLDV 342
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--LSVIDLLVAILMENNAYE 223
P+N + K + L+ G+ +++ + KV P D D + + +LLV+ +
Sbjct: 343 HPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSPRDVDAWIEIGELLVS-----TDFS 397
Query: 224 KTLQHIEHAQIVRF-SGKELPLKLKVKAGICYLRLGNMEKAE 264
L + A ++ SG+++PL L G+ + G + AE
Sbjct: 398 AALDAFKTAHNLQTKSGEKVPLGLLNNIGVLHFERGEYKLAE 439
>gi|134045937|ref|YP_001097423.1| hypothetical protein MmarC5_0901 [Methanococcus maripaludis C5]
gi|132663562|gb|ABO35208.1| TPR repeat-containing protein [Methanococcus maripaludis C5]
Length = 409
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+A+ K+ +L P P ++ +GL++S L ++ + + Y A L+P D LW
Sbjct: 276 GEYEKAVLNYKKATQLDPENPVFWSGMGLSYSYLKDYNRSIEAYEKAVELTPNDDVLWSN 335
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + +++ Y +A+ ++ L + Y+ I +YEKA Y + ++ P
Sbjct: 336 IGYLQYNNKNYNESISYFEKALELNSENKYAWNGLGNSYLLIKNYEKAVLCYNRAIEIDP 395
Query: 168 DNVDATKTGAQLFLK 182
+A K G L K
Sbjct: 396 TYTEA-KIGKSLISK 409
>gi|172059229|ref|YP_001806881.1| hypothetical protein BamMC406_0164 [Burkholderia ambifaria MC40-6]
gi|171991746|gb|ACB62665.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
Length = 833
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 40 EASLQYAYGN----------FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+ASL A+ N + A+ ++ VR++P+L + +N G AH LG+ +A
Sbjct: 270 DASLALAHANLSGVRRRQARYADALVHAQDAVRIAPDLADAHNQAGNAHHGLGDLVAAQA 329
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
Y A L+P DS L +++ A+A+ Y R+A+ +S+ ++L
Sbjct: 330 CYRTALELNPADSGACHNLSVVLLKRERHAEALAYCRRALAGGRPTVSMYVNLGDILRAQ 389
Query: 150 GDYEKAAESYEQIQKLFPDNV--DATKTGAQLFLKCGQTA 187
G+ + A +Y L D+ DA + +L +A
Sbjct: 390 GNVDAAVPAYRDALALVRDDASDDAAEVLGRLLFAAAASA 429
>gi|347733309|ref|ZP_08866370.1| tetratricopeptide repeat family protein [Desulfovibrio sp. A2]
gi|347517906|gb|EGY25090.1| tetratricopeptide repeat family protein [Desulfovibrio sp. A2]
Length = 186
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Query: 22 RRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSAL 81
R+ N + P LG A++ GN + A+ L ++ + N ++ +GL
Sbjct: 31 RKAAGSNGVHP--DPYLGLATIAVQRGNLDSALVLYRKAAAIEAN-DKSLAGMGLVEMET 87
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
G H AF+ +V A ++P + LL G + + ++R + P+ ++R
Sbjct: 88 GAHAEAFNHFVAALGMNPGNLVAMNGLLRLGYHLGRIDEVVAHLRAFLELSPEKDNVRFS 147
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
LA + +G ++A E I PD+ DA + A L
Sbjct: 148 LAGCLISLGRKDEARAELETILDRAPDHADAREMYALL 185
>gi|332711804|ref|ZP_08431735.1| glycosyltransferase involved in cell wall biogenesis [Moorea
producens 3L]
gi|332349782|gb|EGJ29391.1| glycosyltransferase involved in cell wall biogenesis [Moorea
producens 3L]
Length = 1427
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 15/248 (6%)
Query: 14 RKLNKKRGRRKGS-KNKLSP-GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETY 71
R++ + +G +G K+ L P V + AS+ E+A++L ++ + L P+ E +
Sbjct: 35 RQVIQIQGDYQGEEKSLLKPYNVIAIANFASIFEEKNKLEEAVALYQQALTLKPDFAEVH 94
Query: 72 NTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRA 131
N LG A G A +Y A + P + L +G +A++ ++AIR
Sbjct: 95 NNLGNIFWAKGELDKAVQYYQEAIKVKPDYAVAHNNLGNLLHNQGKLGEAVHCYQEAIRV 154
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+P +L + G + A ESY++ KL D A LF G+ +
Sbjct: 155 KPDYAQAYCNLGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTLFQTQGKLDAARE 214
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAG 251
+E +++ P AD + L IL + E+ +Q + A ++LK
Sbjct: 215 SYQEAIRLKPDYADAH--NNLGTILQKQGKLEEAVQSYQEA-----------IRLKPDFA 261
Query: 252 ICYLRLGN 259
Y LGN
Sbjct: 262 EVYNNLGN 269
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 25/145 (17%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP-------- 99
G ++ + V+ + PNL YN LG A GN A Y A + P
Sbjct: 856 GQLSDSVECYQRVLTIQPNLVPVYNNLGYALQQQGNWDDAIASYQQALEIEPTCTEADVN 915
Query: 100 -------------KDSALWKQL---LTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHL 142
+ A + QL L QK GD A+ Y RQA+ + +S +L
Sbjct: 916 LGNALHAQEKLALEKQAHYAQLNHELGVTRQKAGDLTNAVAYYRQAVAMQSDLVSAHYNL 975
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFP 167
+ G++E A SY+++ +L P
Sbjct: 976 GVVLQDQGEFENAIASYQKVLELNP 1000
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 51/121 (42%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L +++ PN PE LG+ G + +A + P W L
Sbjct: 792 QAVQLYYKILEQQPNHPEALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSVKAWFSLGNL 851
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+G + ++ ++ + +P + + +L + G+++ A SY+Q ++ P +
Sbjct: 852 CQGQGQLSDSVECYQRVLTIQPNLVPVYNNLGYALQQQGNWDDAIASYQQALEIEPTCTE 911
Query: 172 A 172
A
Sbjct: 912 A 912
>gi|301060387|ref|ZP_07201250.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300445583|gb|EFK09485.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 785
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P + LG A ++ GNFEQA+S E +R P+ LG A + GN + A Y
Sbjct: 555 PSIHYNLGNAYMRN--GNFEQAVSQYSEALRYQPDFVNARVNLGNALARSGNPRKAILQY 612
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A P L G T +A+ + ++ +R +P+D + R L G
Sbjct: 613 EKALASQPDHPGAHYNLAGAFAASGKTQKAVVHYKEVLRLQPEDATARFQLGLILSNSGR 672
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+ + E + ++ P+ V+A A G+T+ ++ E +K++P+ + +L
Sbjct: 673 HSEGEEQFSIALQIKPNFVEARIALADELAVQGKTSEAVAHYNEAMKMNPAVKPMVYYNL 732
Query: 212 LVAILMENNAYEKT 225
+++ E T
Sbjct: 733 ACLYALQHKVEEST 746
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+ L A ++E+A++L +E NL T+ G A+ ++ A D + P
Sbjct: 500 QGYLNEAVKHYEKALTLNRENANARYNLANTFFRAGRTDDAIAQYRKALD-------IRP 552
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
D ++ L ++ G+ QA+ +A+R +P ++ R++L + G+ KA Y
Sbjct: 553 NDPSIHYNLGNAYMRNGNFEQAVSQYSEALRYQPDFVNARVNLGNALARSGNPRKAILQY 612
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
E+ PD+ A A F G+T +++ +E L++ P DA
Sbjct: 613 EKALASQPDHPGAHYNLAGAFAASGKTQKAVVHYKEVLRLQPEDA 657
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 15/259 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + + +L + +++ PN +N L A A G A + A + P +
Sbjct: 399 GYWSDSETLFRHGLQVVPNNYVAHNGLARALEAQGETDEAIRHFETALRICPGFTDGRYN 458
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A + ++P + ++LA+ + G +A + YE+ L
Sbjct: 459 FARILAANGKKREATEQYLSVLESDPGFVQAHVNLANILADQGYLNEAVKHYEKALTLNR 518
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N +A A F + G+T +I + L + P+D S+ L M N +E+ +
Sbjct: 519 ENANARYNLANTFFRAGRTDDAIAQYRKALDIRPNDP--SIHYNLGNAYMRNGNFEQAVS 576
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAI----DHADLIT 283
++++ +R+ + +V G R GN K A LQ++ A+ DH
Sbjct: 577 --QYSEALRYQPDF--VNARVNLGNALARSGNPRK-----AILQYEKALASQPDHPGAHY 627
Query: 284 EVADTLMSLGHSNSALKYY 302
+A + G + A+ +Y
Sbjct: 628 NLAGAFAASGKTQKAVVHY 646
>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 375
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI + + L+P + YN G + L ++ A Y A L P D+ +
Sbjct: 61 GRYEEAIECYDKSISLNPEYADAYNNKGNSFFDLEKYEEALVEYDKAIELKPNDACSYYN 120
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ +AI+ +P + + IG+YE++ +YE+ +L P
Sbjct: 121 KGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKP 180
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ D GQ +I + ++++P+DA
Sbjct: 181 DDADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPNDA 217
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +E+AI + ++L P+ E+Y G++ +G ++ + Y A L P D+ +
Sbjct: 126 YKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADI 185
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ T G +A+ +AI P D + + + ++ YE+A + Y Q +
Sbjct: 186 YNNKGTSLFNLGQYEEAIKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIE 245
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
L P++ + F K G+ +I + +K+ P
Sbjct: 246 LNPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKP 282
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI + + L+PN N G + S L ++ A Y A L+P D+ +
Sbjct: 197 GQYEEAIKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNPNDACSYYN 256
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ +AI+ +P + + IG+YE++ +YE+ +L P
Sbjct: 257 KGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKP 316
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
D+ D ++ G + ++G EE +K + +L D VAI
Sbjct: 317 DDAD-------IYNNKGTSLFNLGEYEEAIKAYNKSIELKP-DFAVAI 356
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +E+AI + ++L P+ E+Y G++ +G ++ + Y A L P D+ +
Sbjct: 262 YKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADI 321
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
+ T G+ +A+ ++I +P D ++ I+ + +E
Sbjct: 322 YNNKGTSLFNLGEYEEAIKAYNKSIELKP-DFAVAINNRTIVIE 364
>gi|145503651|ref|XP_001437800.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404956|emb|CAK70403.1| unnamed protein product [Paramecium tetraurelia]
Length = 743
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A+L GN +QA+ EV+ PN P LG + + A ++ + + P
Sbjct: 514 ATLYEMTGNSKQAMKWYLEVMNKVPNDPNILARLGSLFAREDDEPQALHYFQESYRILPT 573
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L + V++ +A Y +A + + +D+ ++ +AS Y +G ++KA +Y+
Sbjct: 574 NIETISWLGVYYVKQEMYEKASLYFERAAQVQSRDVKWKLMVASCYRRMGHFQKALGNYQ 633
Query: 161 QIQKLFPDNVDATKTGAQLFLKCG 184
+I +PDN++ + QL + G
Sbjct: 634 KIYSDYPDNIECLRFLVQLCREMG 657
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L+ +V +PE + + GN K A +Y+ + P D + +L +
Sbjct: 495 QALDKLQTIV----CIPEVLYQMATLYEMTGNSKQAMKWYLEVMNKVPNDPNILARLGSL 550
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
++ D QA++Y +++ R P +I L +YV+ YEKA+ +E+ ++ +V
Sbjct: 551 FAREDDEPQALHYFQESYRILPTNIETISWLGVYYVKQEMYEKASLYFERAAQVQSRDVK 610
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
A + + G +++G ++ +P ++ + LV + E
Sbjct: 611 WKLMVASCYRRMGHFQKALGNYQKIYSDYPD--NIECLRFLVQLCRE 655
>gi|427728339|ref|YP_007074576.1| cytochrome c biogenesis factor [Nostoc sp. PCC 7524]
gi|427364258|gb|AFY46979.1| cytochrome c biogenesis factor [Nostoc sp. PCC 7524]
Length = 492
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
M G A+L N+ +AI ++V++L PN E + LG + N + A Y
Sbjct: 344 MRGRANLYLK--NYAEAIQDYRQVIKLEPNNDEAHYLLGYTLTRTNNLEEAIAAYRQTIK 401
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L+P+ + + L + ++G +A+ ++Q+I+ +PK+ +L E G YE+A
Sbjct: 402 LNPRHAHAYNNLGSIFGRQGRYNEAIQVLQQSIQLDPKNTPAYFNLGRALYETGRYEQAV 461
Query: 157 ESYEQIQKLFPD 168
E + Q KL P+
Sbjct: 462 EYFRQALKLEPN 473
>gi|170078681|ref|YP_001735319.1| hypothetical protein SYNPCC7002_A2078 [Synechococcus sp. PCC 7002]
gi|169886350|gb|ACB00064.1| TPR domain containing protein [Synechococcus sp. PCC 7002]
Length = 318
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S +P L E GN + AI+ ++ + L P L + + LGLA G+
Sbjct: 53 SITPTTPAAKAKLSEGLALIQQGNLDGAIAQFQQAIALDPLLWQAHYNLGLALGQRGDLP 112
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
SA ++ L P + + L + + QA Y+R+A+ +P +L
Sbjct: 113 SAAQAFLETIALQPNFAVAYGNLGGVLIDSQNWPQAETYLRRALSLDPNLAIAHYNLGLI 172
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
Y G+ + A +++++ ++L P+ DAT A+L+L + + +++E LK
Sbjct: 173 YRHQGNRDAAIQAWQKARELAPNFPDATIQLAELYLAGDRPEAAQPLIQELLK 225
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK--DSALWK 106
N+ QA + L+ + L PNL + LGL + GN +A + A L+P D+ +
Sbjct: 144 NWPQAETYLRRALSLDPNLAIAHYNLGLIYRHQGNRDAAIQAWQKARELAPNFPDATIQL 203
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L A + + AQ + I++ ++++ ++ + GD+ +A ++ +
Sbjct: 204 AELYLAGDRPEAAQPL--IQELLKSQLNLAAVHYLQGRLLTQRGDFSEALAAFRASSERD 261
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILE 194
P +A AQL +K Q A ++ +L+
Sbjct: 262 PTYANAYFAAAQLLIKNNQRAAAMPLLD 289
>gi|365118837|ref|ZP_09337300.1| hypothetical protein HMPREF1033_00646 [Tannerella sp.
6_1_58FAA_CT1]
gi|363649191|gb|EHL88314.1| hypothetical protein HMPREF1033_00646 [Tannerella sp.
6_1_58FAA_CT1]
Length = 467
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y N+ QAI + KE++ + + Y + + L ++ A + A +P ++ L
Sbjct: 239 YDNENYAQAIEVFKELLDVIEDKSMIYELIAECFTKLEKNEDAIRYLDKALSYTPDNANL 298
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ Q + GD + A+ +R++I EPKD L YVEI ++ + + EQ K
Sbjct: 299 YYQQASNYYDLGDISNAIQRLRKSIELEPKDADALAFLGEIYVEIKEFTEGKKFLEQSAK 358
Query: 165 LFPDNVDA 172
L P+N D
Sbjct: 359 LNPENQDV 366
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+AS Y G+ AI L++ + L P + LG + + F +A L+P
Sbjct: 302 QASNYYDLGDISNAIQRLRKSIELEPKDADALAFLGEIYVEIKEFTEGKKFLEQSAKLNP 361
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
++ + L A Q D A+ Y QA+ + ++ L L + GD EKA
Sbjct: 362 ENQDVLVLLGDLASQNSDYNTAISYYEQALSTDIYNVKLTFKLILAHFNSGDQEKAVNMI 421
Query: 160 EQIQK--LFPDNVD 171
Q+ + L DNV+
Sbjct: 422 GQLDETTLQIDNVE 435
>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
Length = 815
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI V++L+ N Y G+ LG H+ A Y +A L+P D+ +
Sbjct: 88 GEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLNPNDADAFNN 147
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G +A+ AI+ P D + + + + G+ EKA E + K
Sbjct: 148 LGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDS 207
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ +DA LF + G+ +++ +K++P+ A
Sbjct: 208 NYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYA 244
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A+ ++L+PN Y G+ G + A Y A L+P + +
Sbjct: 606 GEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMN 665
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++G+ +A+ +AI+ PK + + + + E G+ E A + Y + L P
Sbjct: 666 RGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFLNP 725
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
++ DA LF + G+ +++ + +K++P+ A + ++ EN EK LQ
Sbjct: 726 NDADAYINRGALFGEIGEKEKALQDFNQAIKLNPNYA--TAYYNRGVLIRENGEKEKALQ 783
Query: 228 HIEHA 232
A
Sbjct: 784 DYNMA 788
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-DSALWK 106
G E+A+ + + L+P Y G+ G + A Y +A L+P D A +
Sbjct: 20 GENEKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKDYNMAIKLNPNYDIAYYN 79
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ + F Q G+ +A+ I+ + + I+ + ++G++EKA + Y KL
Sbjct: 80 RGVLFGEQ-GEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLN 138
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
P++ DA L GQ +++ +K++P+DA
Sbjct: 139 PNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDA 176
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP-------- 99
G E+A+ ++L+PN Y G+ + G + AF Y +A L+P
Sbjct: 530 GEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLNPNYATAYQN 589
Query: 100 --KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
K S+ K +L Q+G+ +A+ AI+ P + + + E G+ EKA +
Sbjct: 590 RGKQSSSRKGVLY--KQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQ 647
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
Y + +L P+ A ++ + G+ +++ + +K +P
Sbjct: 648 DYNEAIQLNPNYATAYMNRGVIYGEQGEIEKALQDYNKAIKQNP 691
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A+ K V+RL+PN Y G+ + G ++A + +A L+P + ++
Sbjct: 360 GEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQN 419
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++G A+ AI+ P S + + + + G+ +KA + Y KL P
Sbjct: 420 RGVLFGEQGQIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNP 479
Query: 168 DNVDATKTGAQLFLKCGQTARSI 190
+ A T +F + G+ +++
Sbjct: 480 NYDIAYYTRGLIFKQQGEKVQAL 502
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK-DSALWK 106
G E A++ ++L+P Y G G A Y +A L+P D A +
Sbjct: 428 GQIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYT 487
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ L F Q+G+ QA+ +AI+ + + Y E G+ EKA + + KL
Sbjct: 488 RGLIFK-QQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLN 546
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
P+ A + L+ + G+ ++ +K++P+ A
Sbjct: 547 PNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLNPNYA 584
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 24/302 (7%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
G+ G ++ A Y A L+PK + + +KG+ +A+ AI+ P
Sbjct: 13 GVLFKQQGENEKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKDYNMAIKLNPN 72
Query: 135 -DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
DI+ + + E G+ +KA + Y + KL +N +A LF + G+ +++
Sbjct: 73 YDIAY-YNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDY 131
Query: 194 EEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGIC 253
+K++P+DAD + L +L + +K LQ+ A ++ + + G+
Sbjct: 132 NMAIKLNPNDAD--AFNNLGNLLDDQGQKDKALQNFNTA--IKLNPNDATAYY--NRGVV 185
Query: 254 YLRLGNMEKAEILFA-----DLQWKNA-IDHADLITEVADTLMSLGHSNSALKYYHFLET 307
+ + G EKA F D + +A I+ L + + +L N A+K L
Sbjct: 186 FKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIK----LNP 241
Query: 308 NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDN-IDARLTLASLLLEEAKEEE 366
N T Y + E+ A+ F A+ +F+ N IDA + L ++ ++E+
Sbjct: 242 NYAT----AYYNRGVVFKQKGEKQKALEDFNMAI-KFDSNYIDAYINRGVLFKQQGEKEK 296
Query: 367 AI 368
A+
Sbjct: 297 AL 298
>gi|440683182|ref|YP_007157977.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428680301|gb|AFZ59067.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 534
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI + + ++ N + YN GLAH LGN+++A + Y A ++P + ++
Sbjct: 288 GDYKKAIIDYSQAINININYSQAYNKRGLAHYQLGNYQTAIEDYNQAIRINPDVAVNYRN 347
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKD-ISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
GD A+ QAI+ P D I+ + + Y+ + D +K K+
Sbjct: 348 RAEARSHIGDHQGAIEDYNQAIKINPLDAITQKNREITRYL-LDDQQKLVPEI----KIA 402
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
PD+ A K L+CG +I + ++++P+ AD
Sbjct: 403 PDDAVAYKNRGNTRLECGNYEGAIEDYNQAIQINPNYAD 441
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y GN++ AI + +R++P++ Y A S +G+H+ A + Y A ++P D+
Sbjct: 319 YQLGNYQTAIEDYNQAIRINPDVAVNYRNRAEARSHIGDHQGAIEDYNQAIKINPLDAIT 378
Query: 105 WK--QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
K ++ + + D Q + I+ P D + + +E G+YE A E Y Q
Sbjct: 379 QKNREITRYLL---DDQQKLV---PEIKIAPDDAVAYKNRGNTRLECGNYEGAIEDYNQA 432
Query: 163 QKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++ P+ DA G +I + +KV + D
Sbjct: 433 IQINPNYADAYYNRGNAHSDLGNYEAAIDDFSKVIKVKSNYTD 475
>gi|19173411|ref|NP_597214.1| TRANSCRIPTION FACTOR TAU-LIKE PROTEIN (TFIIIC-LIKE PROTEIN)
[Encephalitozoon cuniculi GB-M1]
gi|19171000|emb|CAD26390.1| TRANSCRIPTION FACTOR TAU-LIKE PROTEIN (TFIIIC-LIKE PROTEIN)
[Encephalitozoon cuniculi GB-M1]
Length = 795
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+L A+ Y + E+ +LKE + L P P+ Y TLGL G+ A+ +++AAH
Sbjct: 45 LLAIANNLYVRNDLERCTEVLKEAICLVPRNPQPYFTLGLIFEERGDITKAYYCFLVAAH 104
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYI 125
L + LW +L ++ Q G + +Y+I
Sbjct: 105 LQKNNYGLWSKLYDYSRQLGYNRERIYFI 133
>gi|410947119|ref|XP_003980301.1| PREDICTED: intraflagellar transport protein 88 homolog [Felis
catus]
Length = 825
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPSQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 90/230 (39%), Gaps = 42/230 (18%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAAHLSPKDSA 103
+A G++E+A KE +R + E +GL + L A D F + A L
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEALDCFLKLHAILRNSAQV 555
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L++ + + + D QA+ ++ Q I P D L Y GD +A + Y +
Sbjct: 556 LYQIANVYELME-DPNQAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESY 614
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ FP N++ VI+ L A ++ E
Sbjct: 615 RYFPSNIE------------------------------------VIEWLGAYYIDTQFCE 638
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
K +Q+ E A +++ S +K ++ C+ R GN +KA + D+ K
Sbjct: 639 KAIQYFERASLIQPS----QVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|354554114|ref|ZP_08973419.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
gi|353553793|gb|EHC23184.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
Length = 380
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI+ ++ L + ++ + HS GN+++A +Y A L ++ +
Sbjct: 73 GDYQRAIATYEQAASLDKDNARIFSGIAYLHSQQGNYQAAVKYYQQALSLDSSNANFYYA 132
Query: 108 LLTFAVQKGDT---AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L GD A A YY AI+ P+ + I L + +YE AAE+Y+++
Sbjct: 133 LGDSLANIGDNNNAASAYYY---AIQLNPQFVKSYIGLGVVLLRQENYEGAAEAYKRVIA 189
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P+N +A L+ Q +++ L ++ D DL + LL ++ E
Sbjct: 190 LDPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVERFSGDVDLRL--LLATAYLQQGQLEL 247
Query: 225 TLQHIEHAQIVRFSGKELPLKL 246
+ ++ A+ + S ++ LK+
Sbjct: 248 GKEQLQRAERIDPSNTKIQLKI 269
>gi|320161088|ref|YP_004174312.1| hypothetical protein ANT_16860 [Anaerolinea thermophila UNI-1]
gi|319994941|dbj|BAJ63712.1| hypothetical protein ANT_16860 [Anaerolinea thermophila UNI-1]
Length = 1424
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 128/314 (40%), Gaps = 22/314 (7%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E I ++++ + E Y LG A GN + A LSP+D W
Sbjct: 187 GEDETVIQNCQKLLEQHSDCSEAYGWLGKAFLRTGNEEEGIASLTRATLLSPEDERWWLA 246
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + + K D A+ ++ A A P+ S+ HL + ++ +A + L+P
Sbjct: 247 ISEYWLSKKDVQSALNTLKSAAMAVPESGSIYFHLGNLLLQQNQVSEALIYLRKASALYP 306
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS-----DADLSVIDLLVAILMENNAY 222
DN ++ L+ Q +G LEE +V + +A + I ++ N Y
Sbjct: 307 DN-------PEIALRLCQALHGLGFLEEARRVLVNLKGKWNAYPEMAYEYSKIAVKQNDY 359
Query: 223 EKTLQHIEHAQIVRFSGKELP-----LKLKVKAGICYLRLGNMEKAEILFADLQWKNAID 277
E+ L+ +E A S E L LK + L+ ++E+AE L + +N D
Sbjct: 360 EEALEALEFAVRGEHSQTEWVYEYARLVLKYPSPSNALKNLHLEQAEGLLRQILSQNPGD 419
Query: 278 HADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGY----LYLKLAECYLSLKERAHA 333
L+ +A+ L+ + A + + L + G +G + L + + +R A
Sbjct: 420 EQGLLL-LAEVLVQVRKPEEAFRVFSQLAEDEGFMSGLSGWRVLHGLGVTSMEMGDRDAA 478
Query: 334 IMFFYKALDRFEDN 347
++F A+ DN
Sbjct: 479 LVFLKDAISHQPDN 492
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 28 NKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGL---AHSALGNH 84
KL P + L +ASL Y + A+S+ + RL + PE N L L + LG+
Sbjct: 1223 GKLPPILELDLEKASLIYRLRGAQAALSVTQ---RLVTDFPEDANALALHAQVLADLGDV 1279
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
KSA F + P L L G QA++ + QAI +P+++ L I L
Sbjct: 1280 KSAERFAFRSLRQEPNQPDLALFLAKMQRNNGQLDQAVHLLTQAIALDPQNVELYIELGQ 1339
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDN 169
Y E +Y+ A +++ ++ P +
Sbjct: 1340 VYSERREYDLALQTFHHAIRIAPHD 1364
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 147/352 (41%), Gaps = 26/352 (7%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
K+ + +L Y + ++ + ++++++ P P G SA+ ++A
Sbjct: 993 KVRFQQALCYLEKDSQKGLEIVRQLLTEHPQHPLYQALFAFLAKDAGEKDSAYQAILLAL 1052
Query: 96 HLSPKDSALWKQLLT-FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
P++ W+ + AV+ GD Q + + +A+ P+ I L Y+ + YEK
Sbjct: 1053 AQFPEEPE-WQAIAAELAVELGDVEQGILHWEKAVSLRPERTDYLIELGWTYMMVEAYEK 1111
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID---L 211
AAE + K+ N AQ++ + +I + S+ D++ + L
Sbjct: 1112 AAEILSRAVKMESSNSSVWFNLAQVYKHLSRVEDAISC-----ALRASEVDITHVQGFIL 1166
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGN-MEKAEILFADL 270
+ +EN YE+ ++ E A + R + L KA + +R+ N + K E + L
Sbjct: 1167 ASELALENEDYEQAKKYAEMA-LERDA-------LNPKAIMAMIRVYNHLNKEEQSLSML 1218
Query: 271 QWKNA----IDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLS 326
+ + I DL E A + L + +AL L T+ D L L A+
Sbjct: 1219 ETLHGKLPPILELDL--EKASLIYRLRGAQAALSVTQRLVTDFPEDANALALH-AQVLAD 1275
Query: 327 LKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD 378
L + A F +++L + + D L LA + + ++A+ LL+ LD
Sbjct: 1276 LGDVKSAERFAFRSLRQEPNQPDLALFLAKMQRNNGQLDQAVHLLTQAIALD 1327
>gi|282897165|ref|ZP_06305167.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281197817|gb|EFA72711.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 231
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ AI++ ++ +L+P + Y+ +G ++ GN + Y A ++P +S +
Sbjct: 58 GDYSGAIAVYQDAAKLAPKNAKIYSGIGYLYAQQGNFSQSLSAYRQAISINPNNSDFYYA 117
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GDTA A R+AI+ + + + L +GDYE A +++Q K+
Sbjct: 118 VGYIKGNLGDTAGAKEAYRRAIQINRNNFNAYLGLGVVQTRLGDYEAAQWAFKQANKIDG 177
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+N + +F + Q + L++ L+++ + D
Sbjct: 178 NNPRVYELIGAMFKQRRQMQEAGNALKQALRLYRTGRD 215
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
LG++ A Y AA L+PK++ ++ + Q+G+ +Q++ RQAI P +
Sbjct: 57 LGDYSGAIAVYQDAAKLAPKNAKIYSGIGYLYAQQGNFSQSLSAYRQAISINPNNSDFYY 116
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
+ +GD A E+Y + ++ +N +A
Sbjct: 117 AVGYIKGNLGDTAGAKEAYRRAIQINRNNFNA 148
>gi|425435008|ref|ZP_18815468.1| Periplasmic protein [Microcystis aeruginosa PCC 9432]
gi|389675300|emb|CCH95582.1| Periplasmic protein [Microcystis aeruginosa PCC 9432]
Length = 363
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ +AI++ ++ L N + ++ +G + G++ +A Y A L P + +
Sbjct: 54 GNYGEAIAIYEQAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQKALSLDPSNPDFFHA 113
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L GD A AI+ EPK++ + L + +Y KA E Y+ I L P
Sbjct: 114 LGYSLANIGDYDNAATSYYYAIQIEPKNVQHYLGLGVVLLRQKNYAKAGEVYQWILALDP 173
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+N A + + ++ +++ + L++ L+ P++++
Sbjct: 174 NNQQAHEIMGKALIEQNKSSEAFDFLQKSLQRFPNNSE 211
>gi|355695674|gb|AES00089.1| intraflagellar transport 88-like protein [Mustela putorius furo]
Length = 785
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 87/229 (37%), Gaps = 37/229 (16%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD--------------- 89
+A G++E+A KE +R + E +GL + L A D
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 555
Query: 90 FYVIA-------------------AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR 130
Y IA + P DS +L +GD +QA Y ++ R
Sbjct: 556 LYQIANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYR 615
Query: 131 AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
P +I + L ++Y++ EKA + +E+ + P V A F + G +++
Sbjct: 616 YFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKAL 675
Query: 191 GILEEYLKVHPSDADL--SVIDLLVAI-LMENNAYEKTLQHIEHAQIVR 236
++ + P + + ++ L I L E Y L+ +E + +R
Sbjct: 676 DTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKMKEIR 724
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 10/233 (4%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA-AHLSPKD 101
L Y F QA S V P G A G+++ A +FY A + S
Sbjct: 460 LYYLENEFSQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCT 519
Query: 102 SALWKQLLTF-AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
AL+ LT+ + + D A + AI + +I A+ Y + D +A E
Sbjct: 520 EALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQI--ANVYELMEDPNQAIEWLM 577
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
Q+ + P + A +L+ G +++ E + PS ++ VI+ L A ++
Sbjct: 578 QLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPS--NIEVIEWLGAYYIDTQ 635
Query: 221 AYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
EK +Q+ E A ++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 636 FCEKAIQYFERASLI----QPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|167037763|ref|YP_001665341.1| hypothetical protein Teth39_1351 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116177|ref|YP_004186336.1| tetratricopeptide repeat-containing protein [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166856597|gb|ABY95005.1| Tetratricopeptide TPR_2 repeat protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929268|gb|ADV79953.1| Tetratricopeptide TPR_1 repeat-containing protein
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 321
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 18/223 (8%)
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
TY LG+ LG AF FY ++ K + +++ A +GD A+ + I
Sbjct: 108 TYTPLGI----LGFIIFAFYFYALSKKPISKAVSFFEKG-KVAYNRGDYKSALDNFLKVI 162
Query: 130 RAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARS 189
EP ISL + Y+ +G+ EKA E +E+ +P++++A L +K GQ ++
Sbjct: 163 EIEPDAISLYKEIGIIYIHLGEDEKANECFEKYLFKYPEDLEAKTHYINLLIKVGQYQKA 222
Query: 190 IGIL----EEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLK 245
+ ++ EEY +L VI+ + +E N + L +E + + +K
Sbjct: 223 LELMNLLPEEY------KNNLFVINAMADCYIELNKPDMALAVLEKGPMRKRKTDTEEMK 276
Query: 246 L-KVKAGICYLRLGNMEKAEILFADL--QWKNAIDHADLITEV 285
+ + G Y +LG EKA F + + N +D A+ + EV
Sbjct: 277 VYRYLLGTVYRKLGQKEKALKQFQKIYVEDSNFLDVAEKLKEV 319
>gi|428772587|ref|YP_007164375.1| hypothetical protein Cyast_0753 [Cyanobacterium stanieri PCC 7202]
gi|428686866|gb|AFZ46726.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
stanieri PCC 7202]
Length = 246
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 25/209 (11%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
GV+ LGE+ GN++ AI + ++ +SP +PE Y GL+ LG ++ A Y
Sbjct: 61 GVS--LGES------GNYQSAIEVFSRIITISPFVPEPYYNRGLSFERLGQYQRAIADYN 112
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
L P+ + + D +A+ +AI +P + A+ Y +G+Y
Sbjct: 113 QTLQLDPEYIPAYINRGNLYSLQDDHQRAINDFTRAINLDPNHYRAYYNRANSYFYLGEY 172
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLL 212
++A Y Q L P DA G T +G LE A +
Sbjct: 173 QRAIVDYNQTLTLNPHYYDAI-------YNRGLTHYQMGDLES--------AQKDLFQAA 217
Query: 213 VAILMEN--NAYEKTLQHIEHAQIVRFSG 239
A L +N N+Y + L+ I+ ++V SG
Sbjct: 218 RAYLNQNDQNSYLEALERIQELELVNDSG 246
>gi|335044186|ref|ZP_08537211.1| TPR domain protein [Methylophaga aminisulfidivorans MP]
gi|333787432|gb|EGL53316.1| TPR domain protein [Methylophaga aminisulfidivorans MP]
Length = 796
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++ + + L P E+++ L S L + + + A ++ KD K
Sbjct: 108 GKLDEAMTRADKALSLKP---ESFDGRILKASILAKEQKFDEASKLLAEVA-KDYPDHKD 163
Query: 108 LLTFAV----QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+L+ V KG A+ ++A+ P+D+SLR+ S Y E+ DY+ A YE+I
Sbjct: 164 ILSLEVLILKDKGQLPAALAKAQEAVEKYPEDLSLRLIELSLYNEMKDYKGMANVYEEIL 223
Query: 164 KLFPDNVDATKTGAQLFL-KCGQTARSIGILEEYLKVHPSDAD 205
+ PD + + A+L + + + ++ IL+ +LK+HP DA+
Sbjct: 224 ERKPDEREVVLSYAKLLVSQLDRYDDALNILQSFLKIHPDDAE 266
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 5/186 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+++A K +++ P E Y L L N K F L P +
Sbjct: 40 GNYDKARLEYKNAIQIDPRQAEPYYRLALLDEQSKNWKQMFANLTTVEQLDPNHVDAQIK 99
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + G +AM +A+ +P+ RI AS + +++A++ ++ K +P
Sbjct: 100 LGRLYLLGGKLDEAMTRADKALSLKPESFDGRILKASILAKEQKFDEASKLLAEVAKDYP 159
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-----NAY 222
D+ D + GQ ++ +E ++ +P D L +I+L + M++ N Y
Sbjct: 160 DHKDILSLEVLILKDKGQLPAALAKAQEAVEKYPEDLSLRLIELSLYNEMKDYKGMANVY 219
Query: 223 EKTLQH 228
E+ L+
Sbjct: 220 EEILER 225
>gi|324508953|gb|ADY43775.1| Intraflagellar transport protein 88 [Ascaris suum]
Length = 598
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L + L+P P + L + A G+ AF + + P + + + L +
Sbjct: 342 QAIELYSQANSLAPTDPAILSKLANIYDAEGDKSQAFQCHYDSYRYFPSNIGVIEWLGAY 401
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A EP +I ++ +AS G+Y+KA + Y QI + FP+N++
Sbjct: 402 YIDAQFPEKAVNYFEKASIMEPNEIKWQLMMASCQRRSGNYQKALDLYRQIHRRFPENIE 461
Query: 172 ATK 174
K
Sbjct: 462 CLK 464
>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
Length = 1297
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 43/301 (14%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+ IS+ ++++++ PN + A+ +G +SA +F + A + P + LWK
Sbjct: 395 GQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRATEIEPSNIELWK- 453
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLR------IHLASFYVEIGDYEKAAESYEQ 161
+ D A+ + ++ I A + IS+ + LA Y + Y+ A ++ E+
Sbjct: 454 ------LRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAKKTLER 507
Query: 162 IQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNA 221
KL D+ + ++ K G + E+ ++P+ N
Sbjct: 508 GLKLKEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPN----------------NKK 551
Query: 222 YEKTLQHI-----EHAQIVRFSGKELPL-----KLKVKAGICYLRLGNMEKAEILFADLQ 271
Y K L + ++ + V + K L L +L + GIC ++ E+A F D
Sbjct: 552 YWKNLAWVMEKLGKYNEAVEYYEKALELDPNDMRLWYEKGICLKKIKRYEEAIKSF-DSA 610
Query: 272 WKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERA 331
K + + E D+L+ LG+ + ALK + L ++ Y+Y + YL K+R
Sbjct: 611 LKLNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKR---AYLRFKKRE 667
Query: 332 H 332
+
Sbjct: 668 Y 668
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 73/161 (45%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y ++ A L+ ++L + E +N LG+ + LG+ ++A + A+ ++P +
Sbjct: 493 YIVSRYDDAKKTLERGLKLKEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKY 552
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
WK L + G +A+ Y +A+ +P D+ L +I YE+A +S++ K
Sbjct: 553 WKNLAWVMEKLGKYNEAVEYYEKALELDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALK 612
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L + A +K G ++ I +K+ +++
Sbjct: 613 LNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERGNSE 653
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 39/196 (19%)
Query: 46 AYGNFE---QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
AY N + +AI+ LK+ +++ PN +++ LG+ + G ++ A + A + P D
Sbjct: 220 AYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDK 279
Query: 103 ALWK-QLLTFAVQKGDTAQAMYYIRQAIRAEPK--------------------------- 134
W + + + D+ +A+ I +A+ + K
Sbjct: 280 KSWYLEASVLHILERDS-EALKSINRALELDKKYESALLLKRDVAKKLKVYDELAAACVG 338
Query: 135 -------DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
D L LA Y G+ EKA I K P ++ K ++ K GQ
Sbjct: 339 LLDVGYEDTELMYDLALSYYHTGELEKAYNITLDILKSLPRHLPTLKLQKEIMKKKGQWE 398
Query: 188 RSIGILEEYLKVHPSD 203
R I I E+ LK+ P+D
Sbjct: 399 RVISICEDILKIEPND 414
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 126 RQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
++ + K+IS LA Y +G + A +Y ++FPDN LK +
Sbjct: 709 KEILTINKKNISAWRDLAVAYDSMGKVDSAIATYRDALEIFPDNDVLLYELKATLLKHNR 768
Query: 186 TARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLK 245
A +I + ++ L + P D D ++ DL A L++ YE +++ A + + + L L
Sbjct: 769 FADAIDVCKKILSIAPEDYD-NLRDLSSA-LIKLKKYEDAKEYLLRALELNKNAELLEL- 825
Query: 246 LKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFL 305
G Y L N A + D NA H + ++A +G A+K
Sbjct: 826 ----LGDTYYYLKNYTSAIEHYKDALNLNASPH--IYHKLAKGYYKVGDLQEAIKAIE-- 877
Query: 306 ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEE 365
+ YL + YL + + A + KA + ED+ DAR+ LAS++ E K +
Sbjct: 878 RAIEWKKDAKFYLLGSRIYLKMGDLNSAYNYANKAFE-LEDSDDARINLASIMFELGKYD 936
Query: 366 EAITLLSPPKDLDSLD 381
+ I LL P ++LD
Sbjct: 937 DVIALLKPLGKNNNLD 952
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 52 QAISLLKEVVRLSPNLPETYNTL----GLAHSALGNHKSAFDFYVIAAHLSPKD-SALWK 106
++I+L+ E + L N E+++ L G+A +G K A + Y +A L P + SA
Sbjct: 41 RSINLINENLELIKNENESFSALLVNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTN 100
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
+ A+QK + +A Y I +A++ + + + A Y GD ++A + Y+++ K++
Sbjct: 101 YAMLLALQK-EYKKAAYIIEKALQIDRRSKEVWGTKAEIYQLKGDIDEALDVYKKLIKMY 159
Query: 167 PDNV 170
PD +
Sbjct: 160 PDEI 163
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 25 GSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNH 84
G N L ++LG+A L+ A +E A+ + +VV + ++ +LG + L +
Sbjct: 946 GKNNNLDA--LRLLGKA-LE-AEERYEDAVKIYNKVVDIDKKDKSSWISLGRCYLTLNKY 1001
Query: 85 KSAFDFYVIAAHLSPKDSALWKQLLTFAVQ-KGDTAQAMYYIRQAIRAEPKD 135
A + A+ + PKD A++ L+FA + GD +A+ Y+ +A+ +P+D
Sbjct: 1002 NEAIKAFERASLIDPKDKAVY-TFLSFAYEGAGDLNKALNYVEKALELDPED 1052
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 32 PGVTKMLGEASLQ-YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
P ++L + +Q Y ++ + + ++K+VV ++ E + LG A++ + + A +
Sbjct: 174 PKDLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINA 233
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKD 135
A + P D W L ++G+ +A+ ++AI+ +P D
Sbjct: 234 LKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIKIDPND 278
>gi|390958632|ref|YP_006422389.1| putative enzyme of heme biosynthesis [Terriglobus roseus DSM 18391]
gi|390413550|gb|AFL89054.1| putative enzyme of heme biosynthesis [Terriglobus roseus DSM 18391]
Length = 729
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 53 AISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFA 112
AI+ L+ ++L P LG A +A GN A + + A LSP D A +L T
Sbjct: 425 AIADLEMALKLKPANGFALVQLGRAQAAQGNAAKAREAFEHALQLSP-DPAAIAELTTLD 483
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
V+ A A+ +RQ ++ P L LA + D A S ++ +L PDN A
Sbjct: 484 VRAHQPAAAVQRVRQQLQRAPASAELYDQLAQAQLAAADTSSALASAKRATELDPDNRSA 543
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+T + L GQ A ++ + + HP+D
Sbjct: 544 AQTFTSVILGTGQLAPAVDLWNRWAAAHPTD 574
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 16/242 (6%)
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
+AM ++QAI KD+S R LAS GD + A + ++ L P +V A A L
Sbjct: 152 EAMRELQQAILLNSKDVSARFSLASILERRGDIKGAEQQMQEAILLVPQSVPARADLAAL 211
Query: 180 FLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSG 239
++ G A++ L++ DLS D A L+E Y++T + Q
Sbjct: 212 YIHAGDRAKAEATLQKATD------DLSN-DPAAAPLLERF-YKETGNTAQAQQTYAALV 263
Query: 240 KELPLKLKVKAGICYLRL----GNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHS 295
+ P L +K + Y+R+ G++++A + DL ++ D +I A LM G +
Sbjct: 264 QRHPGSLSLK--LTYIRVLIDAGSLDRARPMIEDLVQQHETDPG-VILLNAYLLMHDGKN 320
Query: 296 NSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLA 355
+AL+ N D+ L + LA L ++ A + K L N++A+ LA
Sbjct: 321 EAALQLLQTASKNE-PDSVDLGILLARAQDRLGDQQKAADTYRKVLRSDRSNLEAQSGLA 379
Query: 356 SL 357
L
Sbjct: 380 DL 381
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 116 GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKT 175
G A+ ++ A + EP + L I LA +GD +KAA++Y ++ + N++A
Sbjct: 318 GKNEAALQLLQTASKNEPDSVDLGILLARAQDRLGDQQKAADTYRKVLRSDRSNLEAQSG 377
Query: 176 GAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIV 235
A L + G A + L HP+ AD + VA L N A
Sbjct: 378 LADLAYRRGDAADMKESARQMLLAHPNLAD-GYLWRGVANLQSN------------ASAA 424
Query: 236 RFSGKELPLKLKVKAGICYLRLGNMEKAE 264
+ E+ LKLK G ++LG + A+
Sbjct: 425 AIADLEMALKLKPANGFALVQLGRAQAAQ 453
>gi|359460872|ref|ZP_09249435.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris sp. CCMEE 5410]
Length = 810
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
++++A G ++ AIS E + L P ETYN G A LG ++ A Y A L P
Sbjct: 416 GAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEKAIADYRKAIRLQPN 475
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + L + +G A+ + +AI+AE +S ++ S+ +GD + A + +E
Sbjct: 476 QAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSALGDSDGAEQDWE 535
Query: 161 QIQKL 165
+ +L
Sbjct: 536 RALEL 540
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+ Q A NFEQA+ L + + L ETY +G A+ + FD + PK
Sbjct: 355 GNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPDAI----TQFDTLL---EQQPK 407
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+A +++ G+ A+ +A+ +PKD H VE+G YEKA Y
Sbjct: 408 TAAAFRERGAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEKAIADYR 467
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
+ +L P+ AQ +L G G LE +K
Sbjct: 468 KAIRLQPNQ-------AQGYLNLGSVFFVQGKLEAAVK 498
>gi|428212875|ref|YP_007086019.1| hypothetical protein Oscil6304_2480 [Oscillatoria acuminata PCC
6304]
gi|428001256|gb|AFY82099.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 692
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG + +Q G E+AI+ L + + L PN E Y TLG+ + + K AFD + A L
Sbjct: 86 LGNSLIQM--GAIEKAIACLGKQIILQPNSAEAYCTLGILLHEVEDRKRAFDCFTTAIQL 143
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P + + L + ++A+ +++AI +P L +L + E G + ++
Sbjct: 144 KPNLAEAYGNLANLLAELNQVSEAVNCLKKAIILKPGLAELYGNLGNLLCEQGKFNESIF 203
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ ++ PD +A Q+F + Q ++ ++ ++ P A
Sbjct: 204 YLRKAIEIKPDYANAYHKLGQVFQQSNQLEEAVACFQKASELQPDFA 250
>gi|449500473|ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
CTR9 homolog [Cucumis sativus]
Length = 1050
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 124/305 (40%), Gaps = 69/305 (22%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLP------------------------- 68
V +LG+A +++ G++ +++ L K +++ P+ P
Sbjct: 162 VPALLGQACVEFNRGHYSESLELYKRALQVYPDCPAALDPENVEALVGLAIIDLNTNEAG 221
Query: 69 -------------ETYNTLGLAHSALGNHKSAFDFYVIAAHL---------------SPK 100
E Y +A + L NH F+ H P
Sbjct: 222 RIRNGMEKMQRAFEIYPFCAMALNYLANH-----FFFTGQHFLVEQLTETALAITNHGPT 276
Query: 101 DSALWKQLLTFAVQKGDTAQA-MYYIRQAIRA-EPKDISLRIH-LASFYVEIGDYEKAAE 157
S + L KGD +A +YY+ A A +P++ + L +++GD A
Sbjct: 277 KSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRSALS 336
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILM 217
++E++ +++PDN + K ++++ GQ ++ L + K+ P DA + +DL ++
Sbjct: 337 NFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQ-AFLDLGELLIS 395
Query: 218 ENNAYEKTLQHIEHAQI-VRFSGKELPLKLKVKAGICYLRLGNMEKAEILF----ADLQW 272
+ + L + A I ++ G+E+P+++ G+ + E AE +F D W
Sbjct: 396 TDES--AALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 453
Query: 273 KNAID 277
+ ID
Sbjct: 454 LDFID 458
>gi|344232854|gb|EGV64727.1| hypothetical protein CANTEDRAFT_134040 [Candida tenuis ATCC 10573]
Length = 652
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 22/219 (10%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAY-----GNFEQAISLLKEVVRLSP--NLPETYNT 73
RR SK L + G+A + +A+ G EQAIS RL P +LP +
Sbjct: 379 ARRFFSKATL---LNPNFGQAWIGFAHTFAAEGEHEQAISAYAFAARLFPGTHLPNLF-- 433
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
LG+ H + N A ++ + + D L +L K D +A + ++A+ A
Sbjct: 434 LGMQHLLMDNLNLAEEYLSTSYQICNTDPLLLNELGVIHFHKNDLVRAEAFFKEALTASK 493
Query: 134 K-------DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN-VDATKTGAQLFLKCGQ 185
I L +L Y + + +A E Y Q+ ++ N + + ++LK G
Sbjct: 494 NLNSDSQTWICLHANLGHVYRKANELHRALECYNQVLRISDKNDTNLLASIGLVYLKLGN 553
Query: 186 TARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
+SI L + L + PSD DLL L N Y K
Sbjct: 554 HLKSISFLHDALAISPSDP--VATDLLKRALSSNQHYSK 590
>gi|294495566|ref|YP_003542059.1| hypothetical protein Mmah_0891 [Methanohalophilus mahii DSM 5219]
gi|292666565|gb|ADE36414.1| TPR repeat-containing protein [Methanohalophilus mahii DSM 5219]
Length = 1022
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN E AI + +R++P+ +++ LG + A+G +++A D Y A P DS L +
Sbjct: 187 GNHEDAIEHFQAALRINPSKTDSWAQLGECYEAIGEYQTAQDNYDKALQRKPNDSELLLK 246
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
A + D + A+ Y + + +P ++ + A + A Y Q K P
Sbjct: 247 YGLVAEKMDDHSLAIEYYDRVLEIQPYNVDSWKYKARSLEALDQNNYALTCYNQALKYDP 306
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+N QL K G+ SI ++ LK++P A
Sbjct: 307 ENKALWNLKGQLLDKMGRYEESIECYDQALKLNPDHA 343
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL--LTFAVQKGDTAQAMYYIRQAIRAE 132
GL H GNH+ A + + A ++P + W QL A+ + TAQ Y +A++ +
Sbjct: 180 GLYHKNEGNHEDAIEHFQAALRINPSKTDSWAQLGECYEAIGEYQTAQDNY--DKALQRK 237
Query: 133 PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
P D L + ++ D+ A E Y+++ ++ P NVD+ K A+ Q ++
Sbjct: 238 PNDSELLLKYGLVAEKMDDHSLAIEYYDRVLEIQPYNVDSWKYKARSLEALDQNNYALTC 297
Query: 193 LEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
+ LK P + ++ +L +L + YE++++ + A
Sbjct: 298 YNQALKYDPENK--ALWNLKGQLLDKMGRYEESIECYDQA 335
>gi|149598974|ref|XP_001516420.1| PREDICTED: intraflagellar transport protein 88 homolog
[Ornithorhynchus anatinus]
Length = 823
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P LG + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A P + ++ +AS Y G+Y+KA ++Y++I K FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 42/220 (19%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAAHLSPKDSA 103
+A G++E+A KE +R + E +GL + L A D F + A L
Sbjct: 496 FASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 555
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L++ + + + D QA+ ++ Q I P D L Y GD +A + Y +
Sbjct: 556 LYQIANLYEIME-DPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESY 614
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ P N++ VI+ L A ++ E
Sbjct: 615 RYLPSNIE------------------------------------VIEWLGAYYIDTQFCE 638
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
K +Q+ E A ++R + +K ++ CY R GN +KA
Sbjct: 639 KAIQYFERAALIRPT----QVKWQLMVASCYRRSGNYQKA 674
>gi|359322789|ref|XP_534539.4| PREDICTED: intraflagellar transport protein 88 homolog [Canis lupus
familiaris]
Length = 825
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G++E+A KE +R + E +GL + L A D ++ + + +
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEALDCFLKLHTILRNSAQV 555
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D QA+ ++ Q I P D L Y GD +A + Y + +
Sbjct: 556 LYQIANVYELMEDPHQAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYR 615
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 616 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 639
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A +++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 640 AIQYFERASLIQPT----QVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|354565547|ref|ZP_08984721.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353548420|gb|EHC17865.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 279
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 28/164 (17%)
Query: 44 QYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSA 103
+Y GN + AI + L PN Y GLA + LG+ K A + Y A L+P D+
Sbjct: 127 RYDLGNSQSAIQDYNRAINLDPNYALAYYNRGLARNDLGDKKGALEDYSTAIRLNPNDAL 186
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDI-------SLRIHLASFYVEIGDYEKAA 156
+ ++GD A+ QA+R P + R + A ++ I D+EKAA
Sbjct: 187 AYVGRGNVRDEQGDHKGAIEDYNQAVRLNPNEAFAYYNRGVTRYNQADYFGAIEDFEKAA 246
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
+ LFL+ G T + +LE K+
Sbjct: 247 D---------------------LFLRQGNTTQYQQVLELLTKIE 269
>gi|319786999|ref|YP_004146474.1| type IV pilus biogenesis/stability protein PilW [Pseudoxanthomonas
suwonensis 11-1]
gi|317465511|gb|ADV27243.1| type IV pilus biogenesis/stability protein PilW [Pseudoxanthomonas
suwonensis 11-1]
Length = 270
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+G A+ + A G+ +A L + + L ++ + + +G SA GNH++A +Y AA L
Sbjct: 59 VGLAAQRLAAGDLAEAERLARRALSLDASVADGHTLMGAIESARGNHQAAGGYYRKAAEL 118
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA---SFYVEIGDYEK 154
+P D + + G A+++ ++ +A+ A P S LA + + G E+
Sbjct: 119 APNDGDVLNNYGAWLCANGFAAESLVWLDRAM-AAPTAGSRASALANAGACALRSGQSER 177
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
A + + +L P + A + A L G+ ++ E L P+DA SV+ L V
Sbjct: 178 AEQDLRKALELEPSHPGALEQMATLAYGQGRLMQARAFAERRLAAAPADA--SVLQLAVR 235
Query: 215 I 215
I
Sbjct: 236 I 236
>gi|222056118|ref|YP_002538480.1| hypothetical protein Geob_3036 [Geobacter daltonii FRC-32]
gi|221565407|gb|ACM21379.1| Tetratricopeptide TPR_2 repeat protein [Geobacter daltonii FRC-32]
Length = 573
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 135/342 (39%), Gaps = 65/342 (19%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
+AI K+ V L P+ + + L + G K A + Y ++P + + + L+
Sbjct: 200 EAIKYYKKAVELKPDFDQAFIDLAITQEMQGLTKDAINAYKELLKINPVNYTVVQHLVQL 259
Query: 112 AVQKGDTAQAMYYIRQA----------------------------------IRAEPKDIS 137
+Q D A+ ++ +R +P+
Sbjct: 260 YIQNKDMESALILLQDMARNNVGGQESHRKLGLILLEMERYEDAITEFCDILRQDPEAYQ 319
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYL 197
+R +LAS Y E+ D+E A E +++I DA A L+ + GQ A+ I +L+E +
Sbjct: 320 VRYYLASTYEEMEDFETAIEEFKKIPTSSTYYYDAVGHLAYLYKEMGQEAKGIQLLKESI 379
Query: 198 KVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPL--KLKVKAGICYL 255
P+ +L L YE + ++ Q++ P +L + G+ Y
Sbjct: 380 AEQPTKIEL--------YLNLAGLYESMDRFVDGLQVLSEIDDRFPSDPRLNFRMGVLYD 431
Query: 256 RLGN-------MEKA-EILFADLQWKNAI--DHADLITEVADTLMSLGHSNSALKYYHFL 305
++GN M+K ++ D+Q N + +A+L + + L L ++S
Sbjct: 432 KIGNKDASIARMKKVLQLTPNDVQALNYLGYTYAELGVNLDEALQYLKKASS-------- 483
Query: 306 ETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDN 347
D+G++ L Y +K A+ +A++ +D+
Sbjct: 484 ---LRPDDGFIIDSLGWVYFKMKHYDQAVRQLERAVELVDDD 522
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-NHKSAFDFYVIAAHLSPKDSALWK 106
GN + +I+ +K+V++L+PN + N LG ++ LG N A + A+ L P D +
Sbjct: 434 GNKDASIARMKKVLQLTPNDVQALNYLGYTYAELGVNLDEALQYLKKASSLRPDDGFIID 493
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L + QA+ + +A+ D ++ HLA Y +Y KA + + KL
Sbjct: 494 SLGWVYFKMKHYDQAVRQLERAVELVDDDATVISHLADVYYAKKEYRKALAGFRRALKLE 553
Query: 167 PDNVDATKTGAQLFLKCGQ 185
PDN + ++ + G+
Sbjct: 554 PDNRSIAEKIKKIMAETGE 572
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 6/232 (2%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
EA + ++ A+ ++ ++L P E G AL K A +Y A L
Sbjct: 85 AEAQIYLQMNRYQDALQACEKAIKLDPEFAEAQILAGNILVALQRDKDAIPYYKKAIELE 144
Query: 99 PKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
P ++ L ++ + A+ ++ I+ P +L Y ++ +A +
Sbjct: 145 PAKEDIYLHLAIAYLKTFEYEGAVNTLKALIKVSPDSALGYYYLGKTYDQMKLSNEAIKY 204
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
Y++ +L PD A A G T +I +E LK++P + +V+ LV + ++
Sbjct: 205 YKKAVELKPDFDQAFIDLAITQEMQGLTKDAINAYKELLKINP--VNYTVVQHLVQLYIQ 262
Query: 219 NNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADL 270
N E L ++ G+E KL G+ L + E A F D+
Sbjct: 263 NKDMESALILLQDMARNNVGGQESHRKL----GLILLEMERYEDAITEFCDI 310
>gi|150398795|ref|YP_001322562.1| hypothetical protein Mevan_0035 [Methanococcus vannielii SB]
gi|150011498|gb|ABR53950.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus vannielii SB]
Length = 402
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 138/336 (41%), Gaps = 13/336 (3%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
K+L + Y G +E+AI +V+ + Y G + LG K A +F+ A
Sbjct: 14 KILEMGNKLYKLGKYEKAIEKANKVLNIGSENSNAYYLKGSSCWRLGKTKLAKEFFEKAL 73
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
P++ ++ + G+ + + ++ K+ L I L Y +G++EKA
Sbjct: 74 TYEPENIKFIQKYSSLLNYLGNFRETINFLTNLSNLTDKEEILEI-LGDAYENLGNFEKA 132
Query: 156 AESYEQIQKLFPDN--VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
+ YE+I ++FP N + K A + LK Q A I I EE LK D+ + +
Sbjct: 133 VDCYEKILEIFPKNNEILVKKGSALVCLKKFQEA--IEIYEEVLKT--GFYDVRIWKNMG 188
Query: 214 AILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
L YEK IE I K + + G +LG M +A L+ +
Sbjct: 189 HALYTAGKYEKA---IEFFDIFLLENKN-DFQALLSKGDALRKLGRMNEALDLYTKVLEL 244
Query: 274 NAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHA 333
+ ++ D V + +L YY + N + LK+ + YL LK A
Sbjct: 245 DT-NNFDPWCRVGTLYYDINDFEKSL-YYFEIAHEKNPFNPLVLLKMGKNYLKLKRYEKA 302
Query: 334 IMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAIT 369
I F KA+++ E+ A L E + +AIT
Sbjct: 303 IEFLEKAIEKSENYESAWYYKGLALFLEGRYYDAIT 338
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 118/300 (39%), Gaps = 50/300 (16%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+SL GNF + I+ L + L+ E LG A+ LGN + A D Y + PK
Sbjct: 87 SSLLNYLGNFRETINFLTNLSNLTDK-EEILEILGDAYENLGNFEKAVDCYEKILEIFPK 145
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
++ + V+KG + ++AI + + + + +G A YE
Sbjct: 146 NNEI-------LVKKGSALVCLKKFQEAIEIYEEVLKTGFYDVRIWKNMGHALYTAGKYE 198
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL-----LVAI 215
+ + F + K Q L G R +G + E L ++ +L + + +
Sbjct: 199 KAIEFFDIFLLENKNDFQALLSKGDALRKLGRMNEALDLYTKVLELDTNNFDPWCRVGTL 258
Query: 216 LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA------------ 263
+ N +EK+L + E I PL L +K G YL+L EKA
Sbjct: 259 YYDINDFEKSLYYFE---IAHEKNPFNPLVL-LKMGKNYLKLKRYEKAIEFLEKAIEKSE 314
Query: 264 ----------EILFADLQWKNAI---DHADLITE--------VADTLMSLGHSNSALKYY 302
LF + ++ +AI + A LI + +AD LG ++SA+ YY
Sbjct: 315 NYESAWYYKGLALFLEGRYYDAITCYEKAILINDKHPKYHLRIADAYNKLGKTDSAISYY 374
>gi|172038545|ref|YP_001805046.1| putative prenyltransferase [Cyanothece sp. ATCC 51142]
gi|171699999|gb|ACB52980.1| putative prenyltransferase [Cyanothece sp. ATCC 51142]
Length = 383
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI+ ++ L + ++ + HS GN+++A +Y A L ++ +
Sbjct: 76 GDYQRAIATYEQAASLDKDNARIFSGIAYLHSQQGNYQAAVKYYQQALSLDSSNANFYYA 135
Query: 108 LLTFAVQKGDT---AQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L GD A A YY AI+ P+ + I L + +YE AAE+Y+++
Sbjct: 136 LGDSLANIGDNNNAASAYYY---AIQLNPQFVKSYIGLGVVLLRQENYEGAAEAYKRVIA 192
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
L P+N +A L+ Q +++ L ++ D DL + LL ++ E
Sbjct: 193 LDPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVERFSGDVDLRL--LLATAYLQQGQLEL 250
Query: 225 TLQHIEHAQIVRFSGKELPLKL 246
+ ++ A+ + S ++ LK+
Sbjct: 251 GKEQLQRAERIDPSNTKIQLKI 272
>gi|145484458|ref|XP_001428239.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395323|emb|CAK60841.1| unnamed protein product [Paramecium tetraurelia]
Length = 571
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+E+AI + + L+ Y GL AL + A + Y +A ++PK +K
Sbjct: 234 NYEEAIINFNQAIELNSGFANNYVNRGLLFKALNEKQKALEDYDLAISINPKFIKAYKNR 293
Query: 109 LTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T Q+ +A+ + + + PKDI I A+ +G E+A + Y + + P
Sbjct: 294 GTILFQEINQNDKALSDLNKILELNPKDIYTHIQRANLLQLLGCTEQALQDYTKAIDINP 353
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
D + A L+ + GQT ++ ++ L+++P +++
Sbjct: 354 DETENYCKRADLYKQLGQTDLAMKDYDKVLEINPKNSN 391
>gi|17229169|ref|NP_485717.1| hypothetical protein alr1677 [Nostoc sp. PCC 7120]
gi|17135497|dbj|BAB78043.1| alr1677 [Nostoc sp. PCC 7120]
Length = 280
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ ++AI+ E +RLSPN E +N+ G A ++LG++ A Y A LSP + +
Sbjct: 107 GDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNN 166
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+GD A+ QAIR PK + + GD + A Y Q +L
Sbjct: 167 RGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQAIRL 224
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+ Q+A G+ + AI+ + + L P+ Y GLA+ LG+ + A Y A LSP
Sbjct: 65 QGQRQHAQGDSQAAIASYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSP 124
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
D+ + GD A A+ +AIR P + + GD + A E +
Sbjct: 125 NDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKQGALEDF 184
Query: 160 EQIQKLFP 167
Q +L P
Sbjct: 185 NQAIRLNP 192
>gi|406955741|gb|EKD84095.1| hypothetical protein ACD_39C00249G0001, partial [uncultured
bacterium]
Length = 478
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 20/245 (8%)
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
+R +P I ++L + IG YE++ ++ + + PDN + K+G+ ++ +
Sbjct: 58 LRKKPAVIDNYLNLITALNSIGRYEQSYSTFRAARAIAPDNPEVLKSGSHVYELMNRREE 117
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKV 248
+I L L+ P DAD + L +L ++ E L +E E+ +++
Sbjct: 118 AIECLGAALERKPDDAD--AVFRLSGLLYDSGRKEDALLRLESLLKKNPRSNEVLIRM-- 173
Query: 249 KAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYY-----H 303
+L LGN +A+ A + +L ++ + LG + A ++Y +
Sbjct: 174 --AQIHLSLGNAAEAQKYLA--------AYKELAGATSEMYLLLGQTMLARQFYDGAVKN 223
Query: 304 FLET-NAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEA 362
F E A D+ + L YL + E+ A++ F +AL++ DN + + L L
Sbjct: 224 FREAIRAFPDDPQMRFGLGRAYLGMNEKGQALLEFEQALNKSADNPEILIELGKLQNSMG 283
Query: 363 KEEEA 367
E++A
Sbjct: 284 MEDQA 288
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 64/351 (18%), Positives = 130/351 (37%), Gaps = 52/351 (14%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +EQ+ S + ++P+ PE + + + + A + A P D+ +
Sbjct: 79 GRYEQSYSTFRAARAIAPDNPEVLKSGSHVYELMNRREEAIECLGAALERKPDDADAVFR 138
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G A+ + ++ P+ + I +A ++ +G+ AAE+ QK
Sbjct: 139 LSGLLYDSGRKEDALLRLESLLKKNPRSNEVLIRMAQIHLSLGN---AAEA----QKYLA 191
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ ++++L GQT ++ Y+ ++
Sbjct: 192 AYKELAGATSEMYLLLGQT-----------------------------MLARQFYDGAVK 222
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKN-AIDHADLITEVA 286
+ A + P +++ G+ LG EK + L Q N + D+ +++ E+
Sbjct: 223 NFREAI------RAFPDDPQMRFGLGRAYLGMNEKGQALLEFEQALNKSADNPEILIELG 276
Query: 287 DTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFED 346
S+G + A + + +E N + NG +L +A + AI + A +
Sbjct: 277 KLQNSMGMEDQADQTFGRVEKNKNS-NGECFLSIARHFGERNNLPRAIKYLEMAHELSPY 335
Query: 347 NIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKII 397
+ D + TL L + + EA+ + D N W +E II
Sbjct: 336 HPDIQKTLGQTLARQKRHAEALAIFQQAVDT--------YPNCEWGHEGII 378
>gi|118354513|ref|XP_001010518.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89292285|gb|EAR90273.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1619
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
++AI ++ + ++P YN LG A+ G H A Y ++PK+ + L
Sbjct: 899 DEAIQSYQKYLEINPKDDVCYNNLGNAYKGKGLHDEAIQSYQKCLEINPKNDGCHENLGI 958
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+KG +A+ Y Q + P S +L + Y G Y++A +SY+Q ++ P N
Sbjct: 959 AYNEKGLQDEAIQYYLQCLEINPNKDSCYQNLGNAYKAKGLYDEAIKSYQQCLEINPQNY 1018
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ + + G +I ++ L+++P+
Sbjct: 1019 GCYENLGIAYNEKGLQDEAIQSYQKCLEINPN 1050
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 134/332 (40%), Gaps = 30/332 (9%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI ++ + ++P YN LG+A++ G A Y ++P + ++
Sbjct: 556 GLLDEAIQSYQKCLEINPQNYVCYNNLGIAYNQKGLQDEAIQSYQKFIKINPNKDSCYQN 615
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + KG +A+ +Q + P++ +L Y E G ++A +SY++ ++ P
Sbjct: 616 LGNAYLAKGLQDEAIQSYQQCLEINPQNYGCYENLGIAYNEKGLQDEAIQSYQKYLEINP 675
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ + + G +I ++ LK++P + D +L +A YEK L
Sbjct: 676 NKDSCYQNLGNAYKAKGLLNEAIQSYQQCLKINPKN-DGCHENLGIA------QYEKGL- 727
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAE----------ILFADLQWKNAID 277
++ A + LK+ K CY LGN KA+ L ++ KN
Sbjct: 728 -LDEA----IQSYQKCLKISPKNDSCYNNLGNAYKAKGYLDEAIQSYQLCLEINPKNDCC 782
Query: 278 HADL-ITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMF 336
H +L IT L H ++ Y LE N D+ Y L Y + AI
Sbjct: 783 HENLGITYNEKDL----HDDAIQSYQKCLEINPNIDS--FYYNLGNAYKAKGLLDEAIKS 836
Query: 337 FYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
+ K L+ N L E+ +EAI
Sbjct: 837 YQKCLETNPKNNFCYNNLGIAYNEKGLHDEAI 868
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 76/157 (48%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G ++AI ++ ++++P YN LG+A++ G A Y ++P++ +
Sbjct: 520 AEGLLDEAIQSYQKCLKINPKNNFCYNNLGIAYNEKGLLDEAIQSYQKCLEINPQNYVCY 579
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L QKG +A+ ++ I+ P S +L + Y+ G ++A +SY+Q ++
Sbjct: 580 NNLGIAYNQKGLQDEAIQSYQKFIKINPNKDSCYQNLGNAYLAKGLQDEAIQSYQQCLEI 639
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
P N + + + G +I ++YL+++P+
Sbjct: 640 NPQNYGCYENLGIAYNEKGLQDEAIQSYQKYLEINPN 676
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 149/368 (40%), Gaps = 41/368 (11%)
Query: 29 KLSP---GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
K++P G + LG A QY G ++AI ++ +++SP YN LG A+ A G
Sbjct: 706 KINPKNDGCHENLGIA--QYEKGLLDEAIQSYQKCLKISPKNDSCYNNLGNAYKAKGYLD 763
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A Y + ++PK+ + L +K A+ ++ + P S +L +
Sbjct: 764 EAIQSYQLCLEINPKNDCCHENLGITYNEKDLHDDAIQSYQKCLEINPNIDSFYYNLGNA 823
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y G ++A +SY++ + P N + + G +I ++ L+++P++ D
Sbjct: 824 YKAKGLLDEAIKSYQKCLETNPKNNFCYNNLGIAYNEKGLHDEAIQSYQKCLEINPNN-D 882
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
+ +L +A +K LQ ++ L++ K +CY LGN K +
Sbjct: 883 VCYNNLGIAY------NQKGLQDEAIQSYQKY------LEINPKDDVCYNNLGNAYKGKG 930
Query: 266 LFA----------DLQWKNAIDHADLITEVADTLMSLGHSNSALKYY-HFLETNAGTDNG 314
L ++ KN H +L + G + A++YY LE N D+
Sbjct: 931 LHDEAIQSYQKCLEINPKNDGCHENLGIAYNEK----GLQDEAIQYYLQCLEINPNKDS- 985
Query: 315 YLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITL---- 370
Y L Y + AI + + L+ N L E+ ++EAI
Sbjct: 986 -CYQNLGNAYKAKGLYDEAIKSYQQCLEINPQNYGCYENLGIAYNEKGLQDEAIQSYQKC 1044
Query: 371 --LSPPKD 376
++P KD
Sbjct: 1045 LEINPNKD 1052
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 71/153 (46%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
++AI + + ++PN Y LG A+ A G + A Y ++P++ ++ L
Sbjct: 967 DEAIQYYLQCLEINPNKDSCYQNLGNAYKAKGLYDEAIKSYQQCLEINPQNYGCYENLGI 1026
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+KG +A+ ++ + P S +L + Y E G ++A +SY++ ++ P N
Sbjct: 1027 AYNEKGLQDEAIQSYQKCLEINPNKDSCYNNLGNAYYEKGFQDEAIQSYQKCLEINPKNE 1086
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ + G +I ++YL+++P +
Sbjct: 1087 GCYNNLGIAYNEKGLQDEAIQSYQKYLEINPKN 1119
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G ++AI ++ + ++P YN LG+A++ G A Y ++PK+ A
Sbjct: 1063 YEKGFQDEAIQSYQKCLEINPKNEGCYNNLGIAYNEKGLQDEAIQSYQKYLEINPKNDAC 1122
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L KG +A+ ++ + PK+ +L + Y + G ++A +SY++ +
Sbjct: 1123 YNNLGNAYQAKGLQDEAIKQYQKCLEINPKNEGCYENLGNAYNQKGLQDEAIQSYQKCLE 1182
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
+ P N D+ + G ++ G+L+E +K +
Sbjct: 1183 MNP-NKDSC------YYNLGNAYKAKGLLDEAIKSY 1211
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G ++AI ++ + ++P YN LG+ ++ G A Y ++P +
Sbjct: 1335 YEKGLQDEAIQSYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSC 1394
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L KG +A+ ++ + PK+ +L Y E G ++A +SY++ +
Sbjct: 1395 YNNLGNTYKAKGLLDEAINSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLE 1454
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
+ P N K + + G +I ++ L+++P + D+ +L +A EK
Sbjct: 1455 INPKNDVCYKNLGIAYYEIGLLDEAIQSYQKCLEINPKN-DVCYNNLGIAY------NEK 1507
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGN 259
LQ ++ L++ K +CY LGN
Sbjct: 1508 GLQDEAIQSYQKY------LEMNPKNDVCYNNLGN 1536
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 146/377 (38%), Gaps = 40/377 (10%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI ++ + ++PN YN LG+A++ G A Y ++PKD +
Sbjct: 862 GLHDEAIQSYQKCLEINPNNDVCYNNLGIAYNQKGLQDEAIQSYQKYLEINPKDDVCYNN 921
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L KG +A+ ++ + PK+ +L Y E G ++A + Y Q ++ P
Sbjct: 922 LGNAYKGKGLHDEAIQSYQKCLEINPKNDGCHENLGIAYNEKGLQDEAIQYYLQCLEINP 981
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+ + + G +I ++ L+++P + + L E ++ +Q
Sbjct: 982 NKDSCYQNLGNAYKAKGLYDEAIKSYQQCLEINPQ--NYGCYENLGIAYNEKGLQDEAIQ 1039
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGN--MEKAEILFAD--LQWKNAIDHADLIT 283
+ L++ CY LGN EK F D +Q +
Sbjct: 1040 SYQKC-----------LEINPNKDSCYNNLGNAYYEKG---FQDEAIQSYQKCLEINPKN 1085
Query: 284 EVADTLMSLGHSNSALK------YYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFF 337
E + + ++ L+ Y +LE N D Y L Y + + AI +
Sbjct: 1086 EGCYNNLGIAYNEKGLQDEAIQSYQKYLEINPKND--ACYNNLGNAYQAKGLQDEAIKQY 1143
Query: 338 YKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNSDKSNPWWLNEKII 397
K L+ N L + ++ ++EAI L+MN +K + ++
Sbjct: 1144 QKCLEINPKNEGCYENLGNAYNQKGLQDEAIQSYQK-----CLEMNPNKDSCYY------ 1192
Query: 398 MKLCHIYRAKGMPEDFV 414
L + Y+AKG+ ++ +
Sbjct: 1193 -NLGNAYKAKGLLDEAI 1208
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI ++ + ++P Y LG+A+ +G A Y ++PK+ +
Sbjct: 1440 GLLDEAIKSYQKCLEINPKNDVCYKNLGIAYYEIGLLDEAIQSYQKCLEINPKNDVCYNN 1499
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +KG +A+ ++ + PK+ +L + Y E G +++A +SY++ ++ P
Sbjct: 1500 LGIAYNEKGLQDEAIQSYQKYLEMNPKNDVCYNNLGNAYYEKGLHDEAIQSYQKCLEINP 1559
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
N + + G +I ++ L+++P D D +L A M K
Sbjct: 1560 KNDGCLENLGVAYKAKGLLDAAIKSYQKCLEINP-DKDSCYYNLGKAYWM------KLSN 1612
Query: 228 HIEHAQI 234
HI +AQ
Sbjct: 1613 HISNAQF 1619
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 130/336 (38%), Gaps = 34/336 (10%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G +++AI ++ + ++P Y LG+A++ G A Y ++P + +
Sbjct: 996 AKGLYDEAIKSYQQCLEINPQNYGCYENLGIAYNEKGLQDEAIQSYQKCLEINPNKDSCY 1055
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L +KG +A+ ++ + PK+ +L Y E G ++A +SY++ ++
Sbjct: 1056 NNLGNAYYEKGFQDEAIQSYQKCLEINPKNEGCYNNLGIAYNEKGLQDEAIQSYQKYLEI 1115
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN--NAYE 223
P N + G +I ++ L+++P + EN NAY
Sbjct: 1116 NPKNDACYNNLGNAYQAKGLQDEAIKQYQKCLEINPKNEG----------CYENLGNAYN 1165
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFA----------DLQWK 273
+ E Q + L++ CY LGN KA+ L ++ K
Sbjct: 1166 QKGLQDEAIQSYQKC-----LEMNPNKDSCYYNLGNAYKAKGLLDEAIKSYQKCLEINSK 1220
Query: 274 NAIDHADLITEVADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLKLAECYLSLKERAH 332
N + +L LG + A++ Y +LE N +N Y L Y +
Sbjct: 1221 NGGCYGNL----GIAYNELGLQDEAIQSYQKYLEIN--PENDVCYNNLGNAYKTKGLLDE 1274
Query: 333 AIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
AI + K L+ N L E+ ++EAI
Sbjct: 1275 AIKSYQKCLEINLKNDGCYENLGIAYNEKGLQDEAI 1310
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 71/153 (46%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
++AI ++ + ++PN Y LG A+ A G A Y ++PK++ + L
Sbjct: 491 DEAIQSYQKCLEINPNKDSCYYNLGNAYKAEGLLDEAIQSYQKCLKINPKNNFCYNNLGI 550
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+KG +A+ ++ + P++ +L Y + G ++A +SY++ K+ P+
Sbjct: 551 AYNEKGLLDEAIQSYQKCLEINPQNYVCYNNLGIAYNQKGLQDEAIQSYQKFIKINPNKD 610
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ +L G +I ++ L+++P +
Sbjct: 611 SCYQNLGNAYLAKGLQDEAIQSYQQCLEINPQN 643
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G ++AI ++ + ++P YN LG+A++ G A Y ++PK+
Sbjct: 1471 YEIGLLDEAIQSYQKCLEINPKNDVCYNNLGIAYNEKGLQDEAIQSYQKYLEMNPKNDVC 1530
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L +KG +A+ ++ + PK+ +L Y G + A +SY++ +
Sbjct: 1531 YNNLGNAYYEKGLHDEAIQSYQKCLEINPKNDGCLENLGVAYKAKGLLDAAIKSYQKCLE 1590
Query: 165 LFPD 168
+ PD
Sbjct: 1591 INPD 1594
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI ++ + ++ Y LG+A++ G A Y ++PK+ +
Sbjct: 1270 GLLDEAIKSYQKCLEINLKNDGCYENLGIAYNEKGLQDEAIQSYQKCLEINPKNDICYNN 1329
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +KG +A+ ++ + PK+ +L Y E G ++A +SYE+ ++ P
Sbjct: 1330 LGIAYYEKGLQDEAIQSYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINP 1389
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEE 195
T + G T ++ G+L+E
Sbjct: 1390 -------TKDSCYNNLGNTYKAKGLLDE 1410
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 5/178 (2%)
Query: 29 KLSPG---VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
K++P + LG A L A G ++AI ++ + ++P Y LG+A++ G
Sbjct: 604 KINPNKDSCYQNLGNAYL--AKGLQDEAIQSYQQCLEINPQNYGCYENLGIAYNEKGLQD 661
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A Y ++P + ++ L KG +A+ +Q ++ PK+ +L
Sbjct: 662 EAIQSYQKYLEINPNKDSCYQNLGNAYKAKGLLNEAIQSYQQCLKINPKNDGCHENLGIA 721
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
E G ++A +SY++ K+ P N + G +I + L+++P +
Sbjct: 722 QYEKGLLDEAIQSYQKCLKISPKNDSCYNNLGNAYKAKGYLDEAIQSYQLCLEINPKN 779
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G +AI ++ ++++P + LG+A G A Y +SPK+ + +
Sbjct: 690 AKGLLNEAIQSYQQCLKINPKNDGCHENLGIAQYEKGLLDEAIQSYQKCLKISPKNDSCY 749
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L KG +A+ + + PK+ +L Y E ++ A +SY++ ++
Sbjct: 750 NNLGNAYKAKGYLDEAIQSYQLCLEINPKNDCCHENLGITYNEKDLHDDAIQSYQKCLEI 809
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
P N+D+ + G ++ G+L+E +K +
Sbjct: 810 NP-NIDS------FYYNLGNAYKAKGLLDEAIKSY 837
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 69/152 (45%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
++AI ++ + ++P YN LG A+ G A Y ++ K+ ++ L
Sbjct: 1239 DEAIQSYQKYLEINPENDVCYNNLGNAYKTKGLLDEAIKSYQKCLEINLKNDGCYENLGI 1298
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+KG +A+ ++ + PK+ +L Y E G ++A +SY++ ++ P N
Sbjct: 1299 AYNEKGLQDEAIQSYQKCLEINPKNDICYNNLGIAYYEKGLQDEAIQSYQKCLEINPKNE 1358
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
++ + G +I E+ L+++P+
Sbjct: 1359 GCYNNLGIVYNEKGLQDEAIQSYEKCLEINPT 1390
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G ++AI+ ++ + ++P + LG+A++ G A Y ++PK+ +
Sbjct: 1404 AKGLLDEAINSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLEINPKNDVCY 1463
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
K L + G +A+ ++ + PK+ +L Y E G ++A +SY++ ++
Sbjct: 1464 KNLGIAYYEIGLLDEAIQSYQKCLEINPKNDVCYNNLGIAYNEKGLQDEAIQSYQKYLEM 1523
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
P N + + G +I ++ L+++P + D + +L VA
Sbjct: 1524 NPKNDVCYNNLGNAYYEKGLHDEAIQSYQKCLEINPKN-DGCLENLGVA 1571
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F +AI ++ + ++P + LG+ ++ G A Y ++ K+ + L
Sbjct: 354 FSEAIQSYQKCLEINPKNDACHENLGITYNEKGLQDEAIQSYQKCLEINSKNGGCYGNLG 413
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
QKG +A+ ++ + PK+ +L + Y G +KA +SY + K+ P N
Sbjct: 414 IAYNQKGLQDEAIQSYQKCLEINPKNDDCYNNLGNSYKIKGLLDKAIKSYRKCLKINPKN 473
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 90/222 (40%), Gaps = 13/222 (5%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G ++AI ++ + ++ Y LG+A++ LG A Y ++P++ +
Sbjct: 1200 AKGLLDEAIKSYQKCLEINSKNGGCYGNLGIAYNELGLQDEAIQSYQKYLEINPENDVCY 1259
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L KG +A+ ++ + K+ +L Y E G ++A +SY++ ++
Sbjct: 1260 NNLGNAYKTKGLLDEAIKSYQKCLEINLKNDGCYENLGIAYNEKGLQDEAIQSYQKCLEI 1319
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P N + + G +I ++ L+++P + + L + E ++
Sbjct: 1320 NPKNDICYNNLGIAYYEKGLQDEAIQSYQKCLEINPKNE--GCYNNLGIVYNEKGLQDEA 1377
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
+Q E L++ CY LGN KA+ L
Sbjct: 1378 IQSYEKC-----------LEINPTKDSCYNNLGNTYKAKGLL 1408
>gi|82702040|ref|YP_411606.1| hypothetical protein Nmul_A0911 [Nitrosospira multiformis ATCC
25196]
gi|82410105|gb|ABB74214.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
Length = 875
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + I L+K +R PN E +N LG G A Y A L P+ + +
Sbjct: 91 GRIDIGIELIKRALRFKPNYVEAHNNLGNTLRQQGKLNDAIASYRTAVKLEPRFAEAYGN 150
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++G AM R+A+ +P+ + ++ + E GD E A S+ + L P
Sbjct: 151 LGNALREQGRLDDAMINYRKALGIQPQLAEMHCNIGIVHREQGDLENAVSSFRKALLLKP 210
Query: 168 DNVDATKTGAQLFLKCGQTARSI 190
D+ +A + ++ G+ ++
Sbjct: 211 DSAEAFNNLGNVLVEQGKFEEAV 233
>gi|124024089|ref|YP_001018396.1| hypothetical protein P9303_23981 [Prochlorococcus marinus str. MIT
9303]
gi|123964375|gb|ABM79131.1| Hypothetical protein P9303_23981 [Prochlorococcus marinus str. MIT
9303]
Length = 587
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E A+ + +E ++ + +PET+ A +G + A Y A L+P +
Sbjct: 82 GQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGN 141
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L G+ +A +R+A+ + P+DI+ ++L E G++E+A SY + ++ P
Sbjct: 142 LGALLTDDGELDEAEKVLRRALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKP 201
Query: 168 DNVDA 172
D DA
Sbjct: 202 DFEDA 206
>gi|77165454|ref|YP_343979.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
gi|76883768|gb|ABA58449.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
Length = 934
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F++A++ K + P+ P N +G A+ G A + + A ++P D + L
Sbjct: 458 FDKALAAAKRLREKQPDSPLPINLIGAAYLGKGEESKAQEAFRQALEIAPGDPSATHNLA 517
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
A++KG+ +A ++A+R P + + L++ + G EKA EQ +
Sbjct: 518 MLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSKA 577
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
++ A+ +L+ G+ ARS+ I E ++P+ L ++
Sbjct: 578 LEPRVLLARYYLEQGRPARSLAITREIQDLYPAHPALLLV 617
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 161/407 (39%), Gaps = 60/407 (14%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
+R K SP ++G A L G +A ++ + ++P P + L +
Sbjct: 465 AKRLREKQPDSPLPINLIGAAYL--GKGEESKAQEAFRQALEIAPGDPSATHNLAMLAIK 522
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
GN + A Y A P +L Q+G +A ++ QA+ K + R+
Sbjct: 523 KGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSKALEPRV 582
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNV-----------------DATKTGAQLFLKC 183
LA +Y+E G ++ +IQ L+P + D KT +L
Sbjct: 583 LLARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRDGVKTFQKLVEVQ 642
Query: 184 GQTARSIGIL-----------------EEYLKVHPSDADLSVIDLLVAILMENN--AYEK 224
Q+A++ +L E+ LK++P+ LS I + ++ EN A K
Sbjct: 643 PQSAQAHYLLAKAYATVNNTDKLRKELEQALKLNPNHT-LSKIAMTRLLMQENQPEAANK 701
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
Q ++ A E P ++ + G +R + A I F + ++ +I
Sbjct: 702 LFQELKQAY------PEHP-EVLAQEGWLAMRQNRPQDAIIAFREALKRSPTSQ--IIVN 752
Query: 285 VADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
+A + G+ N +L +L+ + ++ + LA YL+LK+ A F + R
Sbjct: 753 LAHAQLQAGNQNESLATLEDWLKKH--PEDMVVQYNLANLYLALKQEQKAASAFTTVVKR 810
Query: 344 FEDNIDARLTLASLL--------LEEAKEEEAITLLSPPKDLDSLDM 382
DN+ A LA LL LE A+ + +PP +D+L M
Sbjct: 811 APDNVVALNNLAWLLRKNDPAKALEYAERALELAPNAPPV-MDTLGM 856
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A L +E+ + P PE G + A + A SP S + L
Sbjct: 697 EAANKLFQELKQAYPEHPEVLAQEGWLAMRQNRPQDAIIAFREALKRSP-TSQIIVNLAH 755
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+Q G+ +++ + ++ P+D+ ++ +LA+ Y+ + +KAA ++ + K PDNV
Sbjct: 756 AQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTVVKRAPDNV 815
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE 230
A A L L+ A+++ E L++ P+ V+D L +L+E +++L+ +
Sbjct: 816 VALNNLAWL-LRKNDPAKALEYAERALELAPNAP--PVMDTLGMLLLEKGEAKRSLRLLR 872
Query: 231 HA 232
A
Sbjct: 873 KA 874
>gi|17228118|ref|NP_484666.1| hypothetical protein alr0622 [Nostoc sp. PCC 7120]
gi|17129968|dbj|BAB72580.1| alr0622 [Nostoc sp. PCC 7120]
Length = 547
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL- 108
+E AI + +R++P+ Y A S LG+++ A + Y A ++P+ + +K
Sbjct: 337 YEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRG 396
Query: 109 ---LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
A Q G T QAI+ P D + + + +IGDY A E Y Q ++
Sbjct: 397 ISRYLLATQPGFT--------QAIKINPNDANAYKNRGNARADIGDYLGAIEDYNQAIQI 448
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
P DA G +I + ++++PS AD
Sbjct: 449 NPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSYAD 488
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G + +I + ++ S + E Y GL++ LG++++A Y A +++ D+
Sbjct: 264 FAQGEYTASIKNYSQALQASSDNCELYYKRGLSYYQLGDYEAAIADYSQAININLHDAKS 323
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ + Q A+ QAIR P S+ + A +GD + A E Y Q K
Sbjct: 324 YHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQAIK 383
Query: 165 LFPDNVDATKT-GAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ P D K G +L Q + +K++P+DA+
Sbjct: 384 INPQYADTYKNRGISRYLLATQPG-----FTQAIKINPNDAN 420
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + ++++P +TY G++ L + A ++P D+ +K
Sbjct: 369 GDNQGAIEDYTQAIKINPQYADTYKNRGISRYLLATQPG----FTQAIKINPNDANAYKN 424
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GD A+ QAI+ PK + + ++GD E A Y Q ++ P
Sbjct: 425 RGNARADIGDYLGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINP 484
Query: 168 DNVDA 172
DA
Sbjct: 485 SYADA 489
>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
PWS/A]
Length = 817
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 73/158 (46%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++E +I + + ++P Y LGL LGN+K A D+Y A ++P S + +
Sbjct: 464 DYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNI 523
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ D ++ +A+ + + I++ Y Y+KA E Y ++ ++ P+
Sbjct: 524 ALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAIYDKAIEYYNKVLEINPN 583
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
V+A A + ++ I ++ ++++P + D+
Sbjct: 584 KVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYPGNFDV 621
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/125 (19%), Positives = 63/125 (50%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+++AI K+ + ++P+ Y + LA +L ++K++ + + A L ++ ++
Sbjct: 497 GNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYIN 556
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ ++ +A+ Y + + P ++ ++A + YE+ E Y+++ +++P
Sbjct: 557 IGLIYSRQAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYP 616
Query: 168 DNVDA 172
N D
Sbjct: 617 GNFDV 621
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++E+AI + + L+ ++ Y +GLA+ + +++++ +Y A ++P+ ++ + L
Sbjct: 430 DYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINL 489
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISL---RIHLASFYVEIGDYEKAAESYEQIQKL 165
G+ +A+ Y ++A+ P D SL I LA +E DY+ + E + + +L
Sbjct: 490 GLIKHNLGNYKEAIDYYKKALEINP-DYSLAYYNIALAEMSLE--DYKNSLEDFNKALEL 546
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMEN-NAYEK 224
D + ++ + ++I + L+++P+ + +A + N + YE+
Sbjct: 547 GYDEAEIYINIGLIYSRQAIYDKAIEYYNKVLEINPNKVNAYYN---IAFCLSNMDKYEE 603
Query: 225 TLQ 227
TL+
Sbjct: 604 TLE 606
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 60/119 (50%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++A+S L + + + N E YN++GL + +++ A + A L+ ++ + +
Sbjct: 397 YDEALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIG 456
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ D ++ Y +A+ P+ S I+L +G+Y++A + Y++ ++ PD
Sbjct: 457 LAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPD 515
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
++ + ++L +A + +E++I + +V+ + + + Y+ GL+ LG ++ A
Sbjct: 1 MNDNIKELLDKAKEAFENREYEKSIEYIDKVIFYNGDSYDLYHNKGLSKLNLGLYEEAIK 60
Query: 90 FYVIAAHLSPK------DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
+ A L D L K L+F +A+ + ++ DI R+++
Sbjct: 61 DFERAIELGDDGETVYYDRGLAKLYLSF------YGEAIEDFNRVLQINNNDIDSRVNVG 114
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
Y+ + +Y++A Y+++ FPDN+++
Sbjct: 115 LCYLYMKNYKEAINIYDEVIADFPDNINS 143
>gi|338715235|ref|XP_001489102.3| PREDICTED: intraflagellar transport protein 88 homolog [Equus
caballus]
Length = 825
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 90/230 (39%), Gaps = 42/230 (18%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAAHLSPKDSA 103
+A G++E+A KE +R + E +GL + L A D F + A L
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 555
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L++ + + + D QA+ ++ Q I P D L Y GD +A + Y +
Sbjct: 556 LYQIAHVYELME-DPNQAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESY 614
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ FP N++ VI+ L A ++ E
Sbjct: 615 RYFPSNIE------------------------------------VIEWLGAYYIDTQFCE 638
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
K +Q+ E A +++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 639 KAIQYFERASLIQPT----QVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|254434614|ref|ZP_05048122.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
oceani AFC27]
gi|207090947|gb|EDZ68218.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
oceani AFC27]
Length = 926
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F++A++ K + P+ P N +G A+ G A + + A ++P D + L
Sbjct: 450 FDKALAAAKRLREKQPDSPLPINLIGAAYLGKGEESKAQEAFRQALEIAPGDPSATHNLA 509
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
A++KG+ +A ++A+R P + + L++ + G EKA EQ +
Sbjct: 510 MLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSKA 569
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
++ A+ +L+ G+ ARS+ I E ++P+ L ++
Sbjct: 570 LEPRVLLARYYLEQGRPARSLAITREIQDLYPAHPALLLV 609
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 161/407 (39%), Gaps = 60/407 (14%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
+R K SP ++G A L G +A ++ + ++P P + L +
Sbjct: 457 AKRLREKQPDSPLPINLIGAAYL--GKGEESKAQEAFRQALEIAPGDPSATHNLAMLAIK 514
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
GN + A Y A P +L Q+G +A ++ QA+ K + R+
Sbjct: 515 KGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSKALEPRV 574
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNV-----------------DATKTGAQLFLKC 183
LA +Y+E G ++ +IQ L+P + D KT +L
Sbjct: 575 LLARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRDGVKTFQKLVEVQ 634
Query: 184 GQTARSIGIL-----------------EEYLKVHPSDADLSVIDLLVAILMENN--AYEK 224
Q+A++ +L E+ LK++P+ LS I + ++ EN A K
Sbjct: 635 PQSAQAHYLLAKAYATVNNTDKLRKELEQALKLNPNHT-LSKIAMTRLLMQENQPEAANK 693
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
Q ++ A E P ++ + G +R + A I F + ++ +I
Sbjct: 694 LFQELKQAY------PEHP-EVLAQEGWLAMRQNRPQDAIIAFREALKRSPTSQ--IIVN 744
Query: 285 VADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDR 343
+A + G+ N +L +L+ + ++ + LA YL+LK+ A F + R
Sbjct: 745 LAHAQLQAGNQNESLATLEDWLKKH--PEDMVVQYNLANLYLALKQEQKAASAFTTVVKR 802
Query: 344 FEDNIDARLTLASLL--------LEEAKEEEAITLLSPPKDLDSLDM 382
DN+ A LA LL LE A+ + +PP +D+L M
Sbjct: 803 APDNVVALNNLAWLLRKNDPAKALEYAERALELAPNAPPV-MDTLGM 848
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A L +E+ + P PE G + A + A SP S + L
Sbjct: 689 EAANKLFQELKQAYPEHPEVLAQEGWLAMRQNRPQDAIIAFREALKRSP-TSQIIVNLAH 747
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
+Q G+ +++ + ++ P+D+ ++ +LA+ Y+ + +KAA ++ + K PDNV
Sbjct: 748 AQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTVVKRAPDNV 807
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIE 230
A A L L+ A+++ E L++ P+ V+D L +L+E +++L+ +
Sbjct: 808 VALNNLAWL-LRKNDPAKALEYAERALELAPNAP--PVMDTLGMLLLEKGEAKRSLRLLR 864
Query: 231 HA 232
A
Sbjct: 865 KA 866
>gi|428218538|ref|YP_007103003.1| hypothetical protein Pse7367_2313 [Pseudanabaena sp. PCC 7367]
gi|427990320|gb|AFY70575.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 400
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F++A + ++++ +SP + LG G+ K+A D YV A ++P ++ +W +
Sbjct: 197 FDEAAQIYQKLIAISPRNLRAHLNLGYIFQRKGDLKAASDIYVKADEIAPLNADVWFAIG 256
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ + + D AM + + P+ + +A V G+ ++A +Y ++ P +
Sbjct: 257 SLLLVQNDFDTAMQKFERVLDINPRHPEANVAIARVLVGKGEVDEAISAYRKVAAARPSD 316
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
V A L+LK + +I + L+++P D
Sbjct: 317 VAVQYAIADLYLKKESLSGAIVAYRQILRINPDD 350
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 131/336 (38%), Gaps = 42/336 (12%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N + A++ ++ +L P+ ++G + + A + A + +D + L
Sbjct: 94 NIDGALAAYRQAAQLEPDNARIQTSIGYLLTQKNDFAGAIAAFQKATQIDNRDVRAFNAL 153
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
Q D +A+ RQAI EPK+ + V+ +++AA+ Y+++ + P
Sbjct: 154 GYAYAQSRDYNRALTAYRQAINLEPKNAEAHQSIGFILVQQEKFDEAAQIYQKLIAISPR 213
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
N+ A +F + G + I + ++ P +AD V + ++L+ N ++ +Q
Sbjct: 214 NLRAHLNLGYIFQRKGDLKAASDIYVKADEIAPLNAD--VWFAIGSLLLVQNDFDTAMQK 271
Query: 229 IEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADT 288
E L + + H + +A
Sbjct: 272 FERV-----------LDINPR----------------------------HPEANVAIARV 292
Query: 289 LMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNI 348
L+ G + A+ Y + +D Y +A+ YL + + AI+ + + L D+
Sbjct: 293 LVGKGEVDEAISAYRKVAAARPSDVAVQY-AIADLYLKKESLSGAIVAYRQILRINPDDP 351
Query: 349 DARLTLASLLLEEAKEEEAITLLSPPKDLDSLDMNS 384
+A L L L ++ + EA L+ + L +L NS
Sbjct: 352 NANLALGKALAQQKRRAEATKFLNRAQKLYTLAGNS 387
>gi|352085428|ref|ZP_08953048.1| PEP-CTERM system TPR-repeat lipoprotein [Rhodanobacter sp. 2APBS1]
gi|351681849|gb|EHA64963.1| PEP-CTERM system TPR-repeat lipoprotein [Rhodanobacter sp. 2APBS1]
Length = 935
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%)
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
G+H++A Y P+++A L A +GD A+A +QAI PK + I
Sbjct: 526 GHHEAAASRYATVLKKDPRNAAAMTALGQLAALQGDRAEAAKRFKQAIDTAPKSPTAYIA 585
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
L Y E G Y++A + +Q+ PDN A L G ++ +L++ + P
Sbjct: 586 LVVLYGEDGKYDEAVSTAKQLVAASPDNPAALNALGAAELNAGHHGEALKVLQQAVNFAP 645
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 42/193 (21%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++A+S K++V SP+ P N LG A G+H A A + +P+
Sbjct: 594 GKYDEAVSTAKQLVAASPDNPAALNALGAAELNAGHHGEALKVLQQAVNFAPQVPLYRTN 653
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDIS---LRIHL---------------------- 142
L + DT A + I+A+P ++ LR L
Sbjct: 654 LARAQILGKDTKAAASNLDAVIKADPGQVTAVVLRALLKSQDHDLAGATALAQMLQKQPA 713
Query: 143 ---ASFYVEIGD-------YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI-- 190
A F +E GD Y +AA++Y+Q KL D K+ FL ++ +
Sbjct: 714 TKAAGFTLE-GDLYMANKSYREAAQAYQQGLKLQYDRPLVVKS----FLALNESGANAPE 768
Query: 191 GILEEYLKVHPSD 203
G+L ++L HP D
Sbjct: 769 GVLRDWLAKHPDD 781
>gi|126327367|ref|XP_001366386.1| PREDICTED: intraflagellar transport protein 88 homolog [Monodelphis
domestica]
Length = 825
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
Q+I L +++ + P + LG + G+ AF +Y + P + + + L +
Sbjct: 571 QSIEWLMQLISVVPTDSRALSKLGELYDNEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS Y G+Y+KA ++Y++I + FP+NV+
Sbjct: 631 YIDTQFCEKAIKYFERAALIQPTQVKWQLMVASCYRRSGNYQKALDTYKEIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 42/220 (19%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD-FYVIAAHLSPKDSA 103
+A G++E+A KE +R + E +GL + L A D F + A L
Sbjct: 496 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 555
Query: 104 LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
L++ + + + D Q++ ++ Q I P D L Y GD +A + Y +
Sbjct: 556 LYQIANVYEIME-DPNQSIEWLMQLISVVPTDSRALSKLGELYDNEGDKSQAFQYYYESY 614
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
+ FP N++ VI+ L A ++ E
Sbjct: 615 RYFPSNIE------------------------------------VIEWLGAYYIDTQFCE 638
Query: 224 KTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
K +++ E A +++ + +K ++ CY R GN +KA
Sbjct: 639 KAIKYFERAALIQPT----QVKWQLMVASCYRRSGNYQKA 674
>gi|345791944|ref|XP_543747.3| PREDICTED: transmembrane and TPR repeat-containing protein 1 [Canis
lupus familiaris]
Length = 876
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 559 EEAITLLKDSIQYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGV 618
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI P ++L Y +GD A E Y++ ++
Sbjct: 619 FLVDTGSPEKAVAHYQQAIALSPSHHVAMVNLGRLYRSLGDNSAAEEWYKRALQVARKAE 678
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I E + PS +L + + ++A++ + EK HI
Sbjct: 679 ILSPLGA-LYYNTGRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 737
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 33 GVTKMLGEASLQYAYGNF-------EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
GV + A + Y Y NF +AIS + +RL P N LG + +
Sbjct: 469 GVQTLPHNAKVHYNYANFLKDQGRNREAISHYRTALRLYPRHASALNNLG---TLTRDAA 525
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A +Y A L+P+ + L + +A+ ++ +I+ P+ LAS
Sbjct: 526 EAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIQYGPEFADAYSSLASL 585
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E +++A E Y+ K PD+ D + G +++ ++ + + PS
Sbjct: 586 LAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGSPEKAVAHYQQAIALSPSH-H 644
Query: 206 LSVIDL--LVAILMENNA----YEKTLQHIEHAQIV 235
+++++L L L +N+A Y++ LQ A+I+
Sbjct: 645 VAMVNLGRLYRSLGDNSAAEEWYKRALQVARKAEIL 680
>gi|119509153|ref|ZP_01628304.1| TPR repeat protein [Nodularia spumigena CCY9414]
gi|119466319|gb|EAW47205.1| TPR repeat protein [Nodularia spumigena CCY9414]
Length = 226
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 85/188 (45%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
+P + ++ E A ++ AI++ ++ ++ P ++ +G ++ GN A
Sbjct: 36 NPQLKRLFEEGQRLVAANDYNGAIAIYQQAAQIEPRNARIHSGIGYLYAQQGNFPPALAS 95
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y A + +S + V GDT A R+AI+ ++ + L +G
Sbjct: 96 YRRAIAIDANNSDFHYAVGYIKVNMGDTKGAKESYRRAIQLNRNHLNAYLGLGITQARMG 155
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
D+ A +YEQ KL P+N + A ++ + QTA++ +L++ ++ D + ++
Sbjct: 156 DFTAANWAYEQAIKLAPNNAQTYEFMALMYKQRRQTAKANNLLKKARNLYQRRNDSAGVN 215
Query: 211 LLVAILME 218
+ +L E
Sbjct: 216 RIDGMLRE 223
>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 988
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI+ + +RL P Y G A + G + A Y A L PK + +
Sbjct: 244 GEHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYT- 302
Query: 108 LLTFAVQ-KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
FA Q K D +A+ QA+R +PK ++ + F+ GDY++A Y++ +L
Sbjct: 303 ARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLD 362
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
P N A +F + +I ++ L + P DA
Sbjct: 363 PKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDA 400
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + ++ +P YN GLA G H A Y A L PK +A +
Sbjct: 550 GEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAFNN 609
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+KG+ +A+ + QA+R +P + H + GD ++A + +L P
Sbjct: 610 RGAALNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNP 669
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
DA + F G++ R++ L E +++ P
Sbjct: 670 KYADAYQERGVTFQARGESDRALADLAEAVRLKP 703
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++++AI+ E +RL P YN GL + + A + A + PKD+ +++
Sbjct: 346 GDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDAVIYRN 405
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA++ +PK ++ + + G+Y++A Y+Q +L P
Sbjct: 406 RGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDP 465
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
+F G+ R+I ++ L++ P
Sbjct: 466 KQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDP 499
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ +V+RL+P YN G A+ + G + A Y A L+PK + ++
Sbjct: 74 GEYDRAIADYDQVLRLNPKNVIAYNNRGFAYQSKGEYDRAIADYDQALQLNPKYAIAYRN 133
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
KG+ +A+ QA+R PK I + + G+Y++A ++Q +L P
Sbjct: 134 RGDVFRSKGEHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDP 193
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
V A F + R+I ++ L++
Sbjct: 194 KYVVAYNNRGLAFQSKREYDRAIADFDQALRL 225
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI+ + +RL YN GL + G H A + A L PK + ++
Sbjct: 212 YDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPKYTFAYRNRG 271
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
KG+ +A+ QA+ +PK A + DY++A Y+Q +L P +
Sbjct: 272 DAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKS 331
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
V A + F G R+I +E L++ P
Sbjct: 332 VAAYRNRGDFFRSKGDYDRAIADYDEALRLDP 363
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 11/257 (4%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G +++A++ + ++L P Y G G H A Y A L PK
Sbjct: 445 YRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFA 504
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ KG+ +A+ Q +R +PK + + G+Y++A Y+Q +
Sbjct: 505 YNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQ 564
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
P V A F + G+ R+I EE L++ P A + + A L + Y++
Sbjct: 565 HNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSA--AAFNNRGAALNKKGEYDR 622
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAID--HADLI 282
+ ++ A ++ G P G+ + G++++A ADL ++ +AD
Sbjct: 623 AIADLDQALRLK-PGFTNP---HYHRGMAFRHKGDLDRA---LADLNEAVRLNPKYADAY 675
Query: 283 TEVADTLMSLGHSNSAL 299
E T + G S+ AL
Sbjct: 676 QERGVTFQARGESDRAL 692
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI+ + +RL+P Y+ G A+ + G + A Y L+PK+ +
Sbjct: 40 GEYDRAIADYDQALRLNPKYVTAYSNRGFAYQSKGEYDRAIADYDQVLRLNPKNVIAYNN 99
Query: 108 LLTFAVQ-KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
FA Q KG+ +A+ QA++ PK + + G++++A Y Q +
Sbjct: 100 -RGFAYQSKGEYDRAIADYDQALQLNPKYAIAYRNRGDVFRSKGEHDRAIADYSQALRFN 158
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
P + A +F G+ R+I ++ L++ P
Sbjct: 159 PKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDP 193
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
++++A++ + +RL P Y G + G++ A Y A L PK+ +
Sbjct: 313 DYDRALADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNR 372
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
K + A+ QA+ +PKD + + + G+Y++A +Y+Q +L P
Sbjct: 373 GLVFQSKNEYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPK 432
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
F + G+ R++ ++ L++ P A
Sbjct: 433 YAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQA 468
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 115 KGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATK 174
KG+ +A+ QA+R PK ++ + Y G+Y++A Y+Q+ +L P NV A
Sbjct: 39 KGEYDRAIADYDQALRLNPKYVTAYSNRGFAYQSKGEYDRAIADYDQVLRLNPKNVIAYN 98
Query: 175 TGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH----IE 230
+ G+ R+I ++ L+++P A +A + + +H +
Sbjct: 99 NRGFAYQSKGEYDRAIADYDQALQLNPKYA--------IAYRNRGDVFRSKGEHDRAIAD 150
Query: 231 HAQIVRFSGK 240
++Q +RF+ K
Sbjct: 151 YSQALRFNPK 160
>gi|302343448|ref|YP_003807977.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301640061|gb|ADK85383.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 385
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G +QA+ E ++LSP P T +G A AL + A Y AA+L+ +
Sbjct: 148 AAGKPDQALESFDEALKLSPKSPRTLLAIGEALEALQKDEEALSRYKEAANLAERFVKAH 207
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+L T + GD +A ++R+A + P++ +++L +E G E+ + Q
Sbjct: 208 DRLATLYQKMGDAEEATKHLRRAAKISPRNARRQLNLGKALIEQGMLEEGMAALTNAQ-- 265
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEE 195
+A K LF + G+ S G+ E+
Sbjct: 266 -----NAAKKDPDLFSEVGEVLLSAGLNEQ 290
>gi|206890955|ref|YP_002249256.1| TPR domain protein, [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 542
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-NHKSAFDFYVIAAHLSPKDSALWK 106
G FE+ L+K+ + L P+ E N LG +++ G N K A A L P +
Sbjct: 400 GKFEETEKLMKKTLSLKPDHAEALNYLGYSYADRGINLKEALSLIQKAVQLKPNNGYYLD 459
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L + GD A+ Y+ +AI+ D + HL Y E+G+Y++A +++++ K
Sbjct: 460 SLGWVYFKLGDKKNALQYLLEAIKYVKDDPVILEHLGDIYKELGNYKEALQTWQEAMK 517
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 150/338 (44%), Gaps = 51/338 (15%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+F+ A K +++L+P+ Y LG GN K A ++ A L+P++ ++L
Sbjct: 163 DFKSARESFKTILKLNPDYEPAYTNLGAVEELAGNLKDAELYFKKALELNPENLFARERL 222
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH--LASFYVEIGDYEKAAESYEQIQKLF 166
+ + + +A+ + E K S +IH LA Y++I Y+KA E E +
Sbjct: 223 INLYLSQKSYKEAIKELETL--KEQKSESEQIHEKLALLYLQIKQYDKATEELEYLLSKH 280
Query: 167 PDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD------------------LSV 208
P +++ + ++++ G+ + + +L++ + ++P + L++
Sbjct: 281 PKDLNLMYYLSLIYIETGKLSEAEHLLKQIISINPKQVNAFLNLATVYLKQKKLIEALNI 340
Query: 209 IDLLVAI--------------LMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICY 254
D ++ M+ Y++ Q+IE+A + RF E P + AG+ +
Sbjct: 341 YDEILQFAGDVPEIYIYATETAMDLKDYQRARQYIENA-LSRFP--ENP-DVNFIAGVVF 396
Query: 255 LRLGNMEKAEILF-ADLQWKNAIDHADLITEV----ADTLMSLGHSNSALKYYHFLETNA 309
+LG E+ E L L K DHA+ + + AD ++L + S ++ L+ N
Sbjct: 397 DKLGKFEETEKLMKKTLSLKP--DHAEALNYLGYSYADRGINLKEALSLIQKAVQLKPN- 453
Query: 310 GTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDN 347
NGY L Y L ++ +A+ + +A+ +D+
Sbjct: 454 ---NGYYLDSLGWVYFKLGDKKNALQYLLEAIKYVKDD 488
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 31 SPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
SP +ML + +L G +++AI K++++ + LG+ + + KSA +
Sbjct: 110 SPNKIEMLSKIGNLYLISGMYDKAIETFKKILKEDSENIMALHFLGIIYIEKKDFKSARE 169
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
+ L+P + L G+ A Y ++A+ P+++ R L + Y+
Sbjct: 170 SFKTILKLNPDYEPAYTNLGAVEELAGNLKDAELYFKKALELNPENLFARERLINLYLSQ 229
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
Y++A + E +++ ++ + A L+L+ Q ++ LE L HP D +L
Sbjct: 230 KSYKEAIKELETLKEQKSESEQIHEKLALLYLQIKQYDKATEELEYLLSKHPKDLNL 286
>gi|406951998|gb|EKD81758.1| hypothetical protein ACD_39C01655G0003, partial [uncultured
bacterium]
Length = 934
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 55 SLLKEVVRLSPNLPETYNTLGLAHSALG-NHKSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
++ K+++ +SP+ P N LG ++ G N K A + A ++P++ L A
Sbjct: 265 AVYKKILAISPHNPHALNNLGFLYAEYGVNTKQAQELCQRAVDITPENPGFRDSLGWAAF 324
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
+ D +A +++++ + HL + Y G EKAAE YEQ + PD V+A
Sbjct: 325 KNRDYVKAEEELKKSLSIKKNVYDPHYHLGTVYYATGQLEKAAEYYEQAIAIKPDAVEAL 384
Query: 174 KTGAQLFLKCGQT-ARSIGILEEYLKVHPSDADLSVIDLL 212
A L+ + G+ ++ + + +++ P +A S ID L
Sbjct: 385 NNLAYLYTEQGRKLPEAMAMAKTAVRLEPGNA--SYIDTL 422
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
+A+++ K VRL P +TLG H +G +A + AA ++P + +
Sbjct: 400 EAMAMAKTAVRLEPGNASYIDTLGWTHYRMGELDTALTMLLKAAQIAPGQGEILLHIGRV 459
Query: 112 AVQKGDTAQAMYYIRQAIRAEP------KDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ D QA+ Y+++A +A+P + + I L S++ + DY +
Sbjct: 460 YLDLNDFDQALTYLKEAHKADPALNDPDNSLYVAIRLKSYHRALADY----------HGM 509
Query: 166 FPDNVDATKT 175
F +N D K
Sbjct: 510 FGENADRNKV 519
>gi|21226703|ref|NP_632625.1| hypothetical protein MM_0601 [Methanosarcina mazei Go1]
gi|20904990|gb|AAM30297.1| conserved protein [Methanosarcina mazei Go1]
Length = 1024
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 118/300 (39%), Gaps = 24/300 (8%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+A+ + V+ P GLA + LG H A A ++P + W
Sbjct: 98 EKALEAFRGVIERDPENAGALYYSGLALNQLGRHTEAVSALSEALKINPDNPGAWYYRGV 157
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
G +A+ + + EP A Y+ +G +A + E+ +L P +
Sbjct: 158 SLYILGKCMEALEAFEKTLALEPSHAGAWEGKAKAYLSLGRRREALRACEKAIELEPSSA 217
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--------LSVIDLLVAILMENNAY 222
A +T ++ G+ ++G E+ L + P +A+ L + L+E +
Sbjct: 218 GAWETQGKILKGIGRREEALGAFEKSLILEPMNAENRLEKGRLLGSLGRCGEALLE---F 274
Query: 223 EKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLI 282
E LQ I+ + + K+ G L +GN +KA F+ K ++++
Sbjct: 275 ESVLQ-IDSSLT----------EAKINKGKALLAIGNYQKALDSFSK-TLKEGTENSESW 322
Query: 283 TEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALD 342
+ L++LG A+K Y GT+N + E Y L + A+ FF +AL
Sbjct: 323 GGMGSCLLALGKYYEAMKAYE-RALALGTENSCTLSGIGEIYYELGDLTRALEFFEQALS 381
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
++N+L G ++LG + G +A+ + V+++ +L E G A A+GN++
Sbjct: 251 AENRLEKG--RLLG------SLGRCGEALLEFESVLQIDSSLTEAKINKGKALLAIGNYQ 302
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A D + ++S W + + + G +AM +A+ ++ +
Sbjct: 303 KALDSFSKTLKEGTENSESWGGMGSCLLALGKYYEAMKAYERALALGTENSCTLSGIGEI 362
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQ 185
Y E+GD +A E +EQ L +N A K G+
Sbjct: 363 YYELGDLTRALEFFEQALSLDIENAFAWNGKGNALCKLGK 402
>gi|332298588|ref|YP_004440510.1| hypothetical protein Trebr_1961 [Treponema brennaborense DSM 12168]
gi|332181691|gb|AEE17379.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
brennaborense DSM 12168]
Length = 987
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
++++I L++ + L P+ E Y LG + +G ++ A + + + +P D + L
Sbjct: 93 YQESIEALEQAISLQPDQTEIYYNLGFTYKLMGMYQDALECFKVVIEENPNDILAYNHLG 152
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ + D+A A+ R+ ++ +P L ++LA + +G E+A YE K P
Sbjct: 153 SLYSLRHDSANAIASYRRGLKLDPNHPVLHLNLAKEFEILGKDEEAKLEYESALKAKPGW 212
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL--SVIDL 211
DA A + + + +L + L + P D + S+ DL
Sbjct: 213 ADALNGYASFLMARNKKHEAFDLLAQGLALQPDDPAMLVSMADL 256
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 87 AFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFY 146
AFD L P D A+ + Q G+ A+A R A+ P D + + LA+ Y
Sbjct: 232 AFDLLAQGLALQPDDPAMLVSMADLQTQSGNYAEAFKQYRSALSRNPADENALLGLATVY 291
Query: 147 VEIGDYEKAAESYEQIQK 164
+ G + ++ + +++++K
Sbjct: 292 EKEGKFPESVQIFDKLEK 309
>gi|220922062|ref|YP_002497363.1| hypothetical protein Mnod_2075 [Methylobacterium nodulans ORS 2060]
gi|219946668|gb|ACL57060.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%)
Query: 54 ISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV 113
I+ L +V++ +PN YNT G A++ G++ A + A L P ++ +
Sbjct: 56 IASLSDVIQRNPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYR 115
Query: 114 QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDAT 173
Q G A+ +AI A+P + I A+ +G+YE A Q +L P++ +A
Sbjct: 116 QSGRNDSALQDFTRAINADPNYSAAYIGRANLQRALGNYEAAYSDLSQAIRLTPESAEAY 175
Query: 174 KTGAQLFLKCGQTARSIGILEEYLKVHP 201
+ GQ +IG + + +P
Sbjct: 176 HARGLVRQAQGQHRAAIGDFDAAIDRNP 203
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
+G A+LQ A GN+E A S L + +RL+P E Y+ GL A G H++A + A
Sbjct: 142 IGRANLQRALGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGDFDAAIDR 201
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P +A + + +A+ A+ KD + Y + G ++A E
Sbjct: 202 NPFVNAPYAARGQSLIATNQFDKAIEDYNAALNVNNKDADSWAYRGLAYEKSGRRQEAME 261
Query: 158 SYEQIQKLFPDNV 170
SY++ + P+N
Sbjct: 262 SYQRASAIDPNNA 274
>gi|156839998|ref|XP_001643684.1| hypothetical protein Kpol_1057p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156114305|gb|EDO15826.1| hypothetical protein Kpol_1057p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 724
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 48 GNFEQAISLLKEVVRLSP--NLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
G +QAIS R P +LP + LG+ + AL A +++ +A + P D L
Sbjct: 482 GEHDQAISAYSTASRFFPGMHLPNLF--LGMQYMALNTLTLAEEYFTLAYDIYPNDPLLL 539
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRA-------EPKDISLRIHLASFYVEIGDYEKAAES 158
++ +K D ++ Y+++A+ A IS++++LA Y +G+ E A +
Sbjct: 540 NEMGVLHFKKNDLQKSKRYLKKALEAAKDMDSTSKTSISIQMNLAHTYRRLGEIEMAIKC 599
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
++ I ++ + D + L+LK Q ++I L L + PS++
Sbjct: 600 FKAILEVCGKDPDIFCSLGFLYLKTKQLQKAIDHLHLSLSLKPSNS 645
>gi|338725845|ref|XP_001503021.2| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
repeat-containing protein 1 [Equus caballus]
Length = 912
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI LLK+ ++ P + Y++L + K A D Y P S L
Sbjct: 595 EEAIILLKDSIKYGPEFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYGV 654
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +GD A E Y++ ++
Sbjct: 655 FLVDTGSPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKAE 714
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I E + PS +L + + ++A++ + EK HI
Sbjct: 715 ILSPLGA-LYYNTGRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQTKEAEKMTIHI 773
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 33 GVTKMLGEASLQYAYGNF-------EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
GV + A + Y Y NF +A+ + VRL P N LG + +
Sbjct: 505 GVQTLPHNAKVHYNYANFLKDQGRNREAVYHYRTAVRLYPRHASALNNLG---TLTRDTA 561
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A +Y A L+P+ + L + +A+ ++ +I+ P+ LAS
Sbjct: 562 EAKMYYQRALQLNPQHNRALFNLGNLLKSQDKKEEAIILLKDSIKYGPEFADAYSSLASL 621
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
E +++A + Y+ K PD+ D + G +++ ++ +K+ PS
Sbjct: 622 LAEQERFKEAEDIYQAGIKNCPDSSDLHNNYGVFLVDTGSPEKAVAHYQQAIKLSPSH-H 680
Query: 206 LSVIDL--LVAILMENNA----YEKTLQHIEHAQIV 235
+++++L L L +N+ Y++ LQ A+I+
Sbjct: 681 VAMVNLGRLYRSLGDNSVAEEWYKRALQVARKAEIL 716
>gi|282165368|ref|YP_003357753.1| protein kinase [Methanocella paludicola SANAE]
gi|282157682|dbj|BAI62770.1| protein kinase [Methanocella paludicola SANAE]
Length = 624
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G + AI +E +RL P L + +N LG A A G A Y A P+ +
Sbjct: 400 ARGQVDAAIGEYREALRLDPGLADAHNNLGTALMAKGQSDGAIQEYREALATRPEYAMAH 459
Query: 106 KQL-LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L L++A +G+ AM R+A+R +P + RI+L G +++A E Y +
Sbjct: 460 HNLGLSYAC-RGELGDAMGEYREALRLKPAFVEARINLGLALAISGCFDRAIEEYRKAAV 518
Query: 165 LFPDNV 170
L PD+
Sbjct: 519 LSPDDA 524
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 42 SLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
L YA G A+ +E +RL P E LGLA + G A + Y AA LSP
Sbjct: 463 GLSYACRGELGDAMGEYREALRLKPAFVEARINLGLALAISGCFDRAIEEYRKAAVLSPD 522
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D+ L L + G A+ R A +P + L E+GD + A Y
Sbjct: 523 DAVLHFNLASALRATGRIGDAVDEYRIATGIDPMNARAHYQLGLSLDEMGDLQGAISEYM 582
Query: 161 QIQKLFPDNVDAT 173
+L P A
Sbjct: 583 SALRLNPGEPGAA 595
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 45 YAYGNFEQAISLLKEVVRLSP--------NLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
Y G ++AI + ++ ++L P L +N +G+A+ A G +A Y A
Sbjct: 357 YNVGLLDEAIWVYRKALKLEPMLAGQHGAGLAMVHNNMGVAYDARGQVDAAIGEYREALR 416
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
L P + L T + KG + A+ R+A+ P+ +L Y G+ A
Sbjct: 417 LDPGLADAHNNLGTALMAKGQSDGAIQEYREALATRPEYAMAHHNLGLSYACRGELGDAM 476
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK---VHPSDADL 206
Y + +L P V+A G R+I EEY K + P DA L
Sbjct: 477 GEYREALRLKPAFVEARINLGLALAISGCFDRAI---EEYRKAAVLSPDDAVL 526
>gi|443694227|gb|ELT95420.1| hypothetical protein CAPTEDRAFT_226263 [Capitella teleta]
Length = 837
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QAI ++V + P LG + A G+ AF ++ + +P ++ + L +
Sbjct: 565 QAIEWFLQLVGVVPTDAVVLQRLGEMYDADGDKSQAFQYHYDSFRYNPSTISVIEWLGAY 624
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+ A E+Y+ I K FPDNV+
Sbjct: 625 YIDSQFCEKAIQYFERASIIQPNQVKWKLMIASCHRRSGNYQNALETYKSIHKKFPDNVE 684
>gi|254584704|ref|XP_002497920.1| ZYRO0F16544p [Zygosaccharomyces rouxii]
gi|186703694|emb|CAQ43387.1| Transcription factor tau 131 kDa subunit [Zygosaccharomyces rouxii]
gi|238940813|emb|CAR28987.1| ZYRO0F16544p [Zygosaccharomyces rouxii]
Length = 1028
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 11 KKTRKLNKKRGRRKGSKNK-LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE 69
K+ RK K + + + +N + P V ++L EA+ + + + A + EV++
Sbjct: 95 KRKRKDGKPKPQPRARRNHVMEPEVAQLLSEANEAFVRSDLQVAERVYNEVIKKDAKNFV 154
Query: 70 TYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAI 129
Y TLG + G + + +AAHL+ D WK + + G QA+Y + I
Sbjct: 155 AYETLGDIYQLQGRLNDCCNSWFLAAHLNSSDWEFWKIVAVLSADLGHIRQAIYCYSRVI 214
Query: 130 RAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARS 189
++ + Y EIG +A E ++++ P + + + A L+++ + +
Sbjct: 215 NINHEEWECIYRRSLLYKEIGQIGRALEGFQRLYSHNPLDGNILRELAVLYVEYNRINDA 274
Query: 190 IGI 192
I I
Sbjct: 275 IDI 277
>gi|168705001|ref|ZP_02737278.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
Length = 518
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G A++ NF+ A + + +L+P+ + AHS+L H+ A Y A +S
Sbjct: 116 GRAAVYSRQKNFDAAFADYETAAKLAPDTFRVFFNRANAHSSLNKHEDAVTDYTAALRIS 175
Query: 99 PKDSA--LWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
P+ + L++ + A+ + TA+A+ + A+R +P A Y ++EKA
Sbjct: 176 PRSARAYLYRAMSLEALDR--TAEALTDLSTALRLQPTSAEAFWQRARVYAACDEHEKAV 233
Query: 157 ESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ + KL P + DA + G+ A+++ + + P+D
Sbjct: 234 ADFTWLLKLDPKHADALNLRGVSHAELGEHAKAVADFTRAIAIDPND 280
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 49/122 (40%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
+ +A+ + L P E Y G A++A G H A + A L P + +
Sbjct: 23 AEYPKALEAFSAAIDLEPADAELYFHRGNAYAAAGRHAEAVADFTQAVELRPDYAEAYHN 82
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T V GD A+ +A+ +P+D A+ Y +++ A YE KL P
Sbjct: 83 RATAHVDAGDLDAALADYTRAVELDPEDPDAINGRAAVYSRQKNFDAAFADYETAAKLAP 142
Query: 168 DN 169
D
Sbjct: 143 DT 144
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 29 KLSPGVTKMLGEASLQYAYGN-FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P + + + YA + E+A++ +++L P + N G++H+ LG H A
Sbjct: 207 RLQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALNLRGVSHAELGEHAKA 266
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ A + P D A W + DT A+ ++I P D + + +
Sbjct: 267 VADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQRGYAFH 326
Query: 148 EIGDYEKAAESYEQIQKLFPDN 169
E+ + ++A + + L PD+
Sbjct: 327 ELREADRAVADFTRAIDLRPDS 348
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 119/313 (38%), Gaps = 40/313 (12%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKD-SAL 104
A G +A++ + V L P+ E Y+ AH G+ +A Y A L P+D A+
Sbjct: 55 AAGRHAEAVADFTQAVELRPDYAEAYHNRATAHVDAGDLDAALADYTRAVELDPEDPDAI 114
Query: 105 WKQLLTFAVQKG-DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQ 163
+ ++ QK D A A Y A + P + + A+ + + +E A Y
Sbjct: 115 NGRAAVYSRQKNFDAAFADY--ETAAKLAPDTFRVFFNRANAHSSLNKHEDAVTDYTAAL 172
Query: 164 KLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYE 223
++ P + A A +TA ++ L L++ P+ A+ A Y
Sbjct: 173 RISPRSARAYLYRAMSLEALDRTAEALTDLSTALRLQPTSAE--------AFWQRARVYA 224
Query: 224 KTLQH----IEHAQIVRFSGKEL-PLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDH 278
+H + +++ K L L+ G+ + LG KA AD AID
Sbjct: 225 ACDEHEKAVADFTWLLKLDPKHADALNLR---GVSHAELGEHAKA---VADFTRAIAIDP 278
Query: 279 ADLI---------TEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKE 329
D+ T DT ++ +++ D+ Y++ + L+E
Sbjct: 279 NDVAPWFNRGLSHTRTRDTQAAIDDFTKSIEL--------APDDPAAYVQRGYAFHELRE 330
Query: 330 RAHAIMFFYKALD 342
A+ F +A+D
Sbjct: 331 ADRAVADFTRAID 343
>gi|83311456|ref|YP_421720.1| SPY protein [Magnetospirillum magneticum AMB-1]
gi|82946297|dbj|BAE51161.1| SPY protein [Magnetospirillum magneticum AMB-1]
Length = 798
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G ++AI + L+P L + + LG A A G A + A L P + +
Sbjct: 150 AAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHAEVR 209
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ + G +A R+A+ +P + + +L ++G E AAE Y ++ +
Sbjct: 210 ADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAV 269
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
PD+ A +F K GQ +++ + L++ P++
Sbjct: 270 APDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANG 308
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 1/178 (0%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L+P + K G +A G + A+ + L PN E +G+A + LG + A
Sbjct: 166 ELAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEA 225
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ + A L P + A L G A + I P S ++ +
Sbjct: 226 AECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFK 285
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++G ++A SY+++ +L P N A + + G+ ++ L++ P DAD
Sbjct: 286 KLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPDDAD 343
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G F++AIS +E + L+ E LGLA A G A D + AA L+P +
Sbjct: 116 AQGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAH 175
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L G A A+ +A+ EP +R + ++G E+AAE + + +L
Sbjct: 176 GNLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMEL 235
Query: 166 FPDN 169
P N
Sbjct: 236 DPGN 239
>gi|392374839|ref|YP_003206672.1| hypothetical protein DAMO_1783 [Candidatus Methylomirabilis
oxyfera]
gi|258592532|emb|CBE68841.1| protein of unknown function [Candidatus Methylomirabilis oxyfera]
Length = 2960
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 4/189 (2%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
SK L V + + +A A G+ A L + V+L+P+ PE G LG+ +
Sbjct: 676 SKEALPANVIEQIRQAEQHLAQGDPPAAAQALSQAVQLAPHDPELIVAHGNVLLQLGDVE 735
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+A +V A L+P A L + G +A IR+ + A DI L
Sbjct: 736 AARREFVKATVLAPDYPAAHLNLAAVYLHMGRGEEAEASIRRVLAANSADIDALKLLGRL 795
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA- 204
++ Y +A ESY + + P +V+ + + G+ ++ + L + PS+A
Sbjct: 796 CLDSARYTEAVESYLTVLRHAPHDVETLLIVGNCYAEIGRFDQARAFYRKVLSLEPSNAV 855
Query: 205 ---DLSVID 210
+L+++D
Sbjct: 856 ATDNLAIVD 864
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
S V + + +A A G+ A L + V+L+P+ PE G LG+ ++A
Sbjct: 1656 SANVIEQIRQAEQHLAQGDPPAAAQALSQAVQLAPHDPELIVAHGNVLLQLGDVEAARRE 1715
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
+V A L+P A L + G +A IR+ + A DI L ++
Sbjct: 1716 FVKATVLAPDYPAAHLNLAAVYLHMGRGEEAEASIRRVLAANSADIDALKLLGRLCLDSA 1775
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA----DL 206
Y +A ESY + + P +V+ + + G+ ++ + L + PS+A +L
Sbjct: 1776 RYTEAVESYLTVLRHAPHDVETLLIVGNCYAEIGRFDQARAFYRKVLSLEPSNAVATDNL 1835
Query: 207 SVID 210
+++D
Sbjct: 1836 AIVD 1839
>gi|406966045|gb|EKD91610.1| hypothetical protein ACD_29C00469G0001 [uncultured bacterium]
Length = 499
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GNFE A + + ++ +PN PE Y+ G+ + + +H++A + A L+P S+ +
Sbjct: 15 GNFELAKTQYTKYLKENPNDPEVYHAFGVLLAQMHDHQNAMEKINRAIQLNPNQSSFYNS 74
Query: 108 L--LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L + A++K D A+ Y ++AIR K +L + Y + A +SY++ +L
Sbjct: 75 LGNVFLALKKNDAAKNAY--KKAIRINSKYAVAYNNLGNVYYHQNQFVSAEKSYQKALEL 132
Query: 166 FPDNVDATKTGAQLFLKCGQT 186
P DA L K G T
Sbjct: 133 NPHYTDAQNNLNILLKKMGIT 153
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+EQAISL + ++ +PE + + LG H A ++Y P A + +
Sbjct: 160 YEQAISLFERILSTDDKIPEMNYLVASTYLELGEHSKALNYYFRQLAQKPLFEAYYN-IG 218
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ + A+ Y ++++ P D+S +++L S Y++ ++A Y+ ++ P++
Sbjct: 219 VILMGQDKLNDAIEYFKKSLEYNPNDLSTQLNLGSIYLKQNKLDQAILIYQNANRIKPND 278
>gi|91203857|emb|CAJ71510.1| similar to O-linked GlcNAc transferase [Candidatus Kuenenia
stuttgartiensis]
Length = 430
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 162/376 (43%), Gaps = 51/376 (13%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
+AI K + L+P+L E++N LG+++ + + SA + + +A L+P S L
Sbjct: 55 EAIIQFKRAIALNPDLAESHNNLGVSYCNIQEYDSAIEEFKLAIKLNPDYSKAHDNLGFA 114
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDI-------------SLRIHLASFYVEI--------- 149
+KG +A+ ++A++ P+D+ SL + F +E
Sbjct: 115 YTKKGLFEEAIAEHQRALKINPQDMEAKKNLEIAKREASLEVTKKKFQIETKGISPGYII 174
Query: 150 -------GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
G ++ A S++ I +P+++ + + G +I + + L PS
Sbjct: 175 GYNQYASGLFDDALSSFKNILVGYPNDLMSCYYLGCTYTMKGMVNDAINLYKNLLAKDPS 234
Query: 203 D--ADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNM 260
+ A L++ D I MEN Y++ + +E+ I+R + + K+ G Y G
Sbjct: 235 NIIARLNLAD----IYMENGLYDEAI--LEYENIIRITPNNIHALCKL--GEAYAEKGQP 286
Query: 261 EKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLK 319
EKA +++ N + E+ M G + A+ + F+ + G+ + L
Sbjct: 287 EKAILIYNKAIASNPA-FSKAYKELGSVYMQTGLYDDAISAWSKFIALSPGSSKIHFNLG 345
Query: 320 LAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLA-----SLLLEEAKEEEAIT--LLS 372
LA Y + + AI F KAL +NI LA S L+++A E I L+S
Sbjct: 346 LA--YANKDMFSEAIAAFKKALSIDPENIQTLYHLADAYDKSGLIDDAFHEYNIAAKLIS 403
Query: 373 PPKDLDSLDMNSDKSN 388
K+ + + ++DK N
Sbjct: 404 KAKNKKN-NASADKQN 418
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 38/173 (21%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
+SPG ++G QYA G F+ A+S K ++ PN + LG ++ G A +
Sbjct: 168 ISPGY--IIGYN--QYASGLFDDALSSFKNILVGYPNDLMSCYYLGCTYTMKGMVNDAIN 223
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
L+K LL +P +I R++LA Y+E
Sbjct: 224 --------------LYKNLLA--------------------KDPSNIIARLNLADIYMEN 249
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
G Y++A YE I ++ P+N+ A + + + GQ ++I I + + +P+
Sbjct: 250 GLYDEAILEYENIIRITPNNIHALCKLGEAYAEKGQPEKAILIYNKAIASNPA 302
>gi|427711565|ref|YP_007060189.1| hypothetical protein Syn6312_0417 [Synechococcus sp. PCC 6312]
gi|427375694|gb|AFY59646.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 6312]
Length = 335
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 42/222 (18%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHS---------------------------A 80
GNF+QA+ L ++ +L P ++ +G ++ A
Sbjct: 29 GNFDQALQLYQQAAQLDARNPRIFSAIGFIYAQQKQYGPAAQAYQQAIALDGTNPDFYYA 88
Query: 81 LG--------NHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAE 132
LG NH +A Y A L+P+ ++ L + GDT A+ RQ I E
Sbjct: 89 LGFNLGMTSENHGAAAA-YRQAIRLNPRYVQAYQGLAVILARLGDTQTAIQTYRQIIVME 147
Query: 133 PKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGI 192
P++ L Y+ GD +A + Q + P+N + Q L+ G + +
Sbjct: 148 PRNWEAFQSLGILYLNQGDANQALTALRQASQFVPNNPNVQLNLGQALLQSGDKTQGLAA 207
Query: 193 LEEYLKVHPSDADLSVIDLLVA--ILMENNAYEKTLQHIEHA 232
LE+ + D + I L V L++NN Y+ ++ + A
Sbjct: 208 LEQAASLGQGDGN---IQLTVGKVFLLQNN-YQGAIRAFQRA 245
>gi|350589688|ref|XP_003130917.3| PREDICTED: intraflagellar transport protein 88 homolog, partial
[Sus scrofa]
Length = 417
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 64/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L +++ + P + LG + + G+ AF +Y + P + + L +
Sbjct: 171 QAVEWLMQLLSVVPTDSRVLSKLGGLYDSEGDKSQAFQYYYESYRYFPSSIDVIEWLGAY 230
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
V +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I ++FP+N +
Sbjct: 231 YVDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRMFPENAE 290
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 291 CLRFLVRLCTDIG 303
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 86/226 (38%), Gaps = 40/226 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G++E+A KE +R + E +GL + L A D ++ + + +
Sbjct: 96 FANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAHV 155
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D QA+ ++ Q + P D + L Y GD +A + Y + +
Sbjct: 156 LYQIANIYELMEDPGQAVEWLMQLLSVVPTDSRVLSKLGGLYDSEGDKSQAFQYYYESYR 215
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP ++D VI+ L A ++ EK
Sbjct: 216 YFPSSID------------------------------------VIEWLGAYYVDTQFCEK 239
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADL 270
+Q+ E A ++ + +K ++ C+ R GN +KA + D+
Sbjct: 240 AIQYFERASLI----QPTQVKWQLMVASCFRRSGNYQKALDTYKDI 281
>gi|398824104|ref|ZP_10582449.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. YR681]
gi|398225243|gb|EJN11520.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. YR681]
Length = 461
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++++ E +RL P +PE Y+ GL+ +A+G + A Y A L+PK + +
Sbjct: 223 GQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADYDQALRLAPKPNFFTNR 282
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ + KG+ A+ A++ +P + A Y ++G+ KA YE KL P
Sbjct: 283 GDSYQL-KGELGAALGDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLDP 341
Query: 168 DNVDAT 173
N +A
Sbjct: 342 GNDNAA 347
>gi|154151906|ref|YP_001405524.1| protein kinase [Methanoregula boonei 6A8]
gi|154000458|gb|ABS56881.1| protein kinase [Methanoregula boonei 6A8]
Length = 623
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G F++A+S + LSPN +N G + G K A Y LSP D+ W
Sbjct: 377 GRFDEAVSAYARALELSPNDARVWNNKGTLLARCGRLKEAVSAYSRGLELSPGDARAWNN 436
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ G +A+ +A+ P D+ + + E+G +++A ++ + + P
Sbjct: 437 KGVLLAELGRLEEAVTAYTRALELAPADVKIWNNKGDALAELGRFDEAVSAFRHVCTVDP 496
Query: 168 DNVDA 172
++ DA
Sbjct: 497 EDTDA 501
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 59/156 (37%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F++ ++ + + L P ++ G + LG A Y A LSP D+ +W
Sbjct: 345 FDEVVTAFECSILLEPENIQSLVNKGDFLAELGRFDEAVSAYARALELSPNDARVWNNKG 404
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
T + G +A+ + + P D + E+G E+A +Y + +L P +
Sbjct: 405 TLLARCGRLKEAVSAYSRGLELSPGDARAWNNKGVLLAELGRLEEAVTAYTRALELAPAD 464
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
V + G+ ++ V P D D
Sbjct: 465 VKIWNNKGDALAELGRFDEAVSAFRHVCTVDPEDTD 500
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 2/173 (1%)
Query: 29 KLSPGVTKMLG-EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+LSP ++ + +L G ++A+S + LSP +N G+ + LG + A
Sbjct: 391 ELSPNDARVWNNKGTLLARCGRLKEAVSAYSRGLELSPGDARAWNNKGVLLAELGRLEEA 450
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
Y A L+P D +W + G +A+ R +P+D
Sbjct: 451 VTAYTRALELAPADVKIWNNKGDALAELGRFDEAVSAFRHVCTVDPEDTDAWYSTGGSPA 510
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
+G +E A + L +N + + + + AR G EE + +
Sbjct: 511 PLGRFETALAFETPLPNLPRENTSRPREAEKWYCEGESLARR-GKFEEAVSAY 562
>gi|406982185|gb|EKE03539.1| hypothetical protein ACD_20C00191G0016 [uncultured bacterium]
Length = 302
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 7/197 (3%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNF-------EQAISLLKEVVRLSPNL 67
K+ +R R + ++ + + Y Y NF +AI ++ ++ PNL
Sbjct: 49 KIEFQRNRLQTARKYYLKALEADADSYEILYNYANFLVDIQEYAEAIKYYQKALKKEPNL 108
Query: 68 PETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQ 127
Y + +A+S + + A D Y+ A ++P D+A + L + A+ Y ++
Sbjct: 109 ALAYYNIAVAYSRMEKYDEAIDAYMSALKMNPDDAACYFDLGILYYEMQQMNNAITYFQR 168
Query: 128 AIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTA 187
AI +P ++A ++ A Y + +L PD+ L+L CG
Sbjct: 169 AIELDPYTSKSYEYMAQCFINTNQANLALGFYLKALELSPDDPILYYKLGDLYLSCGHAQ 228
Query: 188 RSIGILEEYLKVHPSDA 204
++ E L + DA
Sbjct: 229 EALKFFNEALNFNSLDA 245
>gi|452211292|ref|YP_007491406.1| hypothetical protein MmTuc01_2855 [Methanosarcina mazei Tuc01]
gi|452101194|gb|AGF98134.1| hypothetical protein MmTuc01_2855 [Methanosarcina mazei Tuc01]
Length = 422
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 3/215 (1%)
Query: 35 TKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIA 94
T + ++ L Y G FE ++ +++V+ + P+ + G+ S + K A D Y A
Sbjct: 197 TALFQKSLLLYKAGRFENSLKFIEQVLEIVPDDFRVWYNKGVILSDMVLLKEALDAYDRA 256
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
L P +W G +A+ + + +PK S + E+
Sbjct: 257 IELEPSFEIVWDNKGVVLAGLGRLEEALETYEKVLLRDPKYAEAWAGKGSVLSALDRKEE 316
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
A E+Y K+ P +A K L K G+ +++ + L+ P D L LV
Sbjct: 317 ALEAYSSALKIRPVYPEALKAAGNLLFKLGRYEKALSTYDMALQASPEDPGLWAGRGLV- 375
Query: 215 ILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVK 249
L E N E+ LQ+ A +R G L++KV+
Sbjct: 376 -LSELNKQEEALQNCNRALELR-PGFNPALEIKVE 408
>gi|340381680|ref|XP_003389349.1| PREDICTED: intraflagellar transport protein 88 homolog [Amphimedon
queenslandica]
Length = 803
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+++AI K+++ L P+ P LG + + + A+ +Y + P + + L
Sbjct: 571 YDKAIDCFKQLISLVPSDPGVLRKLGELYDSENDRSQAYHYYYESFRYCPTNIEVITWLG 630
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ + +A Y +A +P ++ ++ +AS Y ++G+Y+ A Y+ I K FP+N
Sbjct: 631 AYYMDSQYFDKAATYFEKASLIQPDQVNWQLMIASCYRKMGNYQLAYRCYKSILKSFPNN 690
Query: 170 VDATK 174
+D +
Sbjct: 691 IDCLR 695
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
NF A+S ++ + +LP+ + + + + A D + L P D + ++L
Sbjct: 536 NFPSALSCFTKLHTIFKSLPQVLYQIADIYEKMEEYDKAIDCFKQLISLVPSDPGVLRKL 595
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ D +QA +Y ++ R P +I + L ++Y++ ++KAA +E+ + PD
Sbjct: 596 GELYDSENDRSQAYHYYYESFRYCPTNIEVITWLGAYYMDSQYFDKAATYFEKASLIQPD 655
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
V+ A + K G + + LK P++ D
Sbjct: 656 QVNWQLMIASCYRKMGNYQLAYRCYKSILKSFPNNID 692
>gi|32477513|ref|NP_870507.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1]
gi|32448067|emb|CAD77584.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1]
Length = 680
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E+A+SL L+P L E YN LG +G+ +++ A + P + +
Sbjct: 490 GDLEEALSLYTRATELNPGLAEAYNGLGATQGMMGDFEASEATLKQAIEIDPNYANSYGN 549
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L T +G +A+ ++A++ P+ + R +L + +E A++ ++ + P
Sbjct: 550 LATLRSAQGRNEEAIELFQKAVQLAPERMDHRTNLGRVLMSAQRWEDASKVWQSVLDESP 609
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
++V A + +T +IG E L++ P+
Sbjct: 610 EDVSALLNLGVIAANQQRTEDAIGYFERVLEIVPN 644
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 28 NKLSPGVTKML-GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKS 86
+L+PG+ + G + Q G+FE + + LK+ + + PN +Y L SA G ++
Sbjct: 503 TELNPGLAEAYNGLGATQGMMGDFEASEATLKQAIEIDPNYANSYGNLATLRSAQGRNEE 562
Query: 87 AFDFYVIAAHLSPK----DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL 142
A + + A L+P+ + L + L++ Q+ + A ++ + + P+D+S ++L
Sbjct: 563 AIELFQKAVQLAPERMDHRTNLGRVLMS--AQRWEDASKVW--QSVLDESPEDVSALLNL 618
Query: 143 ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
E A +E++ ++ P+++ AT + G T+ + E+Y +
Sbjct: 619 GVIAANQQRTEDAIGYFERVLEIVPNHLSATYNLGAMHDALGNTSEA----EQYFR 670
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 68/156 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G++ +A + L+ + + PN ++ L A LG+ + A Y A L+P + +
Sbjct: 456 GDYLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNG 515
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L GD + ++QAI +P + +LA+ G E+A E +++ +L P
Sbjct: 516 LGATQGMMGDFEASEATLKQAIEIDPNYANSYGNLATLRSAQGRNEEAIELFQKAVQLAP 575
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ +D ++ + + + + + L P D
Sbjct: 576 ERMDHRTNLGRVLMSAQRWEDASKVWQSVLDESPED 611
>gi|16332208|ref|NP_442936.1| hypothetical protein slr0751 [Synechocystis sp. PCC 6803]
gi|383323949|ref|YP_005384803.1| hypothetical protein SYNGTI_3041 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383327118|ref|YP_005387972.1| hypothetical protein SYNPCCP_3040 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383493002|ref|YP_005410679.1| hypothetical protein SYNPCCN_3040 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384438270|ref|YP_005652995.1| hypothetical protein SYNGTS_3042 [Synechocystis sp. PCC 6803]
gi|451816359|ref|YP_007452811.1| hypothetical protein MYO_130780 [Synechocystis sp. PCC 6803]
gi|2496796|sp|Q04737.1|Y751_SYNY3 RecName: Full=TPR repeat-containing protein slr0751
gi|217095|dbj|BAA01277.1| ORF248 [Synechocystis sp. PCC 6803]
gi|1653838|dbj|BAA18748.1| slr0751 [Synechocystis sp. PCC 6803]
gi|339275303|dbj|BAK51790.1| hypothetical protein SYNGTS_3042 [Synechocystis sp. PCC 6803]
gi|359273269|dbj|BAL30788.1| hypothetical protein SYNGTI_3041 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359276439|dbj|BAL33957.1| hypothetical protein SYNPCCN_3040 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279609|dbj|BAL37126.1| hypothetical protein SYNPCCP_3040 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960145|dbj|BAM53385.1| hypothetical protein BEST7613_4454 [Bacillus subtilis BEST7613]
gi|451782328|gb|AGF53297.1| hypothetical protein MYO_130780 [Synechocystis sp. PCC 6803]
Length = 248
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+ +A+ L V+ LSP+ PET+ GLA LGN A Y + L +
Sbjct: 75 GNYAEAVELFSVVLNLSPDSPETHYNRGLAWERLGNVDQAIADYGRSIALDRYYIPPYIN 134
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
Q+ D A+ QAI +P + A+ Y ++G Y +A Y ++ L P
Sbjct: 135 RGNLYSQQQDHHTAIQDFTQAITYDPNRYKAYYNRANSYFQLGQYAQAIADYNRVLVLRP 194
Query: 168 DNVDATKTGAQLFLKCGQ 185
D ++A + GQ
Sbjct: 195 DYINAIYNRGLAHFQAGQ 212
>gi|14324257|dbj|BAB59185.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 240
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+E+A+ +RL +LP+ Y G + LG + A Y AA L D +
Sbjct: 102 GNYEKALEEFNSAIRLEDDLPDYYYNRGNVYWKLGEIEKAIQDYSKAADLDYTDQIYVYK 161
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ + +AI+ P + + A +++ YE+A E+++KL P
Sbjct: 162 KYEALTSLGRYDEALETVDKAIKVVPANYNYLAMKAELLIKMKRYEEARPVIEEVEKLNP 221
Query: 168 DNVDATKTGAQLFLK 182
N DA + AQ+ +K
Sbjct: 222 GNPDAARLMAQINMK 236
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y+ ++QAI + + L PN + +N LG + +GN++ A + + A L
Sbjct: 65 YSMKAYDQAIEDFERSISLDPNSSDYHNALGSVYEDMGNYEKALEEFNSAIRLED----- 119
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPK----DISLRIHLASFY---VEIGDYEKAAE 157
L + +G+ + I +AI+ K D + +I++ Y +G Y++A E
Sbjct: 120 --DLPDYYYNRGNVYWKLGEIEKAIQDYSKAADLDYTDQIYVYKKYEALTSLGRYDEALE 177
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ K+ P N + A+L +K + + ++EE K++P + D
Sbjct: 178 TVDKAIKVVPANYNYLAMKAELLIKMKRYEEARPVIEEVEKLNPGNPD 225
>gi|397781371|ref|YP_006545844.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939873|emb|CCJ37128.1| TPR repeat-containing protein MJ1345 [Methanoculleus bourgensis
MS2]
Length = 184
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 21 GR-RKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHS 79
GR RK S + L+ VT + G++ A+S+L + + L+P + +N G
Sbjct: 2 GRSRKKSDDWLNEAVTLL--------ENGDYSGALSILNKSLELNPMSADAWNNKGFVLD 53
Query: 80 ALGNHKSAFDFYVIAAHLSPKDSALW--KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDIS 137
LG + A Y L P D+ W + L A+ + + A Y Q + P D
Sbjct: 54 ELGRSEEALQCYDQVLKLRPDDAGAWNSRGLALCALDRFEEALQCY--DQVLELRPDDAD 111
Query: 138 LRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
++ + E+ +E+A + Y+++ KL PD++ A + K G++
Sbjct: 112 AWNNMGAVLDELDRFEEALQCYDRVLKLDPDDMAAWHNKSVTLDKLGRS 160
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+A+ +V++L P+ +N+ GLA AL + A Y L P D+ W
Sbjct: 56 GRSEEALQCYDQVLKLRPDDAGAWNSRGLALCALDRFEEALQCYDQVLELRPDDADAWNN 115
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ + +A+ + ++ +P D++ + + ++G E+AA Y + +L
Sbjct: 116 MGAVLDELDRFEEALQCYDRVLKLDPDDMAAWHNKSVTLDKLGRSEEAARCYSRALEL 173
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
S K S W ++ GD + A+ + +++ P + E+G E+A +
Sbjct: 4 SRKKSDDWLNEAVTLLENGDYSGALSILNKSLELNPMSADAWNNKGFVLDELGRSEEALQ 63
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILM 217
Y+Q+ KL PD+ A + + ++ ++ L++ P DAD + + A+L
Sbjct: 64 CYDQVLKLRPDDAGAWNSRGLALCALDRFEEALQCYDQVLELRPDDAD--AWNNMGAVLD 121
Query: 218 ENNAYEKTLQ 227
E + +E+ LQ
Sbjct: 122 ELDRFEEALQ 131
>gi|297569136|ref|YP_003690480.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925051|gb|ADH85861.1| Tetratricopeptide TPR_2 repeat protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 592
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 47/268 (17%)
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
++L +Q+ + QA+Y++R+ I +P D++ R LA Y + D ++AA Y++I L
Sbjct: 98 RRLAMLLLQQQEREQAIYWVRRIIAIDPTDLAARSLLAKLYTALDDPDRAAAVYQEILTL 157
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
P N +A A ++ + + ILE+ + P AY
Sbjct: 158 DPGNANAMLMLAVIYGSSDRRQEAREILEQLVADQP-------------------AY--- 195
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEV 285
F G +L G+ LG E+A +L W A L E+
Sbjct: 196 -----------FLGHYYLARLYHDLGLIEQALGAYERA----LELNWS-----APLAQEL 235
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLK--ERAHAIMFFYKALDR 343
A + G +L + D L LA+ YL L+ E A A + + R
Sbjct: 236 AAIYEAAGLYEDSLALLRRMVAKNPADERARSL-LADLYLRLERVEEALAELTALRPYSR 294
Query: 344 FEDNIDARLTLASLLLEEAKEEEAITLL 371
D +D LT+A +LL+E + EEA+ LL
Sbjct: 295 DVDRVD--LTMARILLDEQRYEEAVVLL 320
>gi|119485107|ref|ZP_01619492.1| hypothetical protein L8106_06654 [Lyngbya sp. PCC 8106]
gi|119457335|gb|EAW38460.1| hypothetical protein L8106_06654 [Lyngbya sp. PCC 8106]
Length = 385
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A+ + + L P+ P+ Y+ + + GN+++A FY A L P++
Sbjct: 75 GKIDEAVLVYVQAAGLDPSDPKIYSGIAYLEALRGNYQAAAKFYRDALVLDPQNPDFQYG 134
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L V+ D A R+AI +P ++ + LA GDY A ++YE + P
Sbjct: 135 LAYSLVKSEDYRGAADAYRKAISLKPDLLNAYLGLAVSLFRQGDYGSAVKTYEMVIASDP 194
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAIL 216
+N A + L+ T +++ L + + P++A + I L VA+L
Sbjct: 195 NNWQAYASMGMALLRQDNTPKAVETLRQAATLAPNEASIQ-IKLGVALL 242
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 38 LGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
LG A + G++ A+ + V+ PN + Y ++G+A N A + AA L
Sbjct: 167 LGLAVSLFRQGDYGSAVKTYEMVIASDPNNWQAYASMGMALLRQDNTPKAVETLRQAATL 226
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
+P ++++ +L ++ GD A A+ QA P+D ++ + D + A E
Sbjct: 227 APNEASIQIKLGVALLRSGDQAGAIAAFEQAAALSPRDGEIQFQIGEVLKSQDDLDAAME 286
Query: 158 SYEQIQKLFPDNVDA 172
+Y++ PD V+A
Sbjct: 287 AYQRALAFNPDLVEA 301
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N +A+ L++ L+PN LG+A G+ A + AA LSP+D + Q+
Sbjct: 212 NTPKAVETLRQAATLAPNEASIQIKLGVALLRSGDQAGAIAAFEQAAALSPRDGEIQFQI 271
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
+ D AM ++A+ P + + + ++ +Y A S+ ++ P
Sbjct: 272 GEVLKSQDDLDAAMEAYQRALAFNPDLVEADVAIGEIQLQKKEYIGAIVSFRRVINRVPQ 331
Query: 169 NVDA-TKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
N +A G + + G+ +++I LE+ LK++ D
Sbjct: 332 NANAHYHLGMAIKGRGGRDSQAIAALEKALKLYEQQGD 369
>gi|108757682|ref|YP_630165.1| hypothetical protein MXAN_1921 [Myxococcus xanthus DK 1622]
gi|108461562|gb|ABF86747.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 490
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G E A +L+ + P T+N LGL + AL + A + + AA L P
Sbjct: 218 AQVYYREGKHELARMVLENARAIDPKDAATHNGLGLVYLALDSRPQALESFKTAAQLRPD 277
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + D A A+ + A+RA P S R++L + + G++ +A YE
Sbjct: 278 FAEARNNFGAMLNEAQDYAAAVTELEAAVRAAPDFASARLNLGNAHRGQGNFARARAEYE 337
Query: 161 QIQKLFPDNVDA 172
Q+ L P DA
Sbjct: 338 QVLLLMPRAADA 349
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G A + L+ +V L P L + LG+ +G A Y A ++P+ + W
Sbjct: 89 GELTAAEAALRTLVELDPKLDYAWTNLGIVQERMGKTADAERSYRKALDVAPEQQSAWDC 148
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + G TA+ +R+ + ++P ++LR LA ++ ++ A+ +Q K
Sbjct: 149 LARLYGRTGRTAKLEAELRERLSSQPDSVALRTALAITLLQAKNHAAASAEAKQALKGDE 208
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+V A + AQ++ + G+ + +LE + P DA
Sbjct: 209 RHVRAMQVLAQVYYREGKHELARMVLENARAIDPKDA 245
>gi|410478515|ref|YP_006766152.1| hypothetical protein LFML04_0960 [Leptospirillum ferriphilum ML-04]
gi|406773767|gb|AFS53192.1| putative TPR domain-containing protein [Leptospirillum ferriphilum
ML-04]
Length = 204
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + +AIS ++++ +P+ P LG G + A + A L P+D++ +
Sbjct: 20 GQYIEAISAYRQILVQAPDSPHILRRLGECLLKKGVPREAVSCFHEAVKLDPQDASQFHL 79
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA-------ESYE 160
L + GD +A+ + +AI EP+++S ++ L ++G +KAA ++E
Sbjct: 80 LAQAHRETGDIDRALVALERAIAIEPENVSYQVDLGWCLADLGAMKKAAVLQERAIRAFE 139
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P++ + A L+ + ++ +E+ L++ P D D
Sbjct: 140 TALALHPNDPGVLEGLASLYKDTNRIDLALDTIEKALELDPYDLD 184
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP + + LGE L+ G +A+S E V+L P ++ L AH G+ A
Sbjct: 39 SPHILRRLGECLLKK--GVPREAVSCFHEAVKLDPQDASQFHLLAQAHRETGDIDRALVA 96
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR-------AEPKDISLRIHLA 143
A + P++ + L G +A +AIR P D + LA
Sbjct: 97 LERAIAIEPENVSYQVDLGWCLADLGAMKKAAVLQERAIRAFETALALHPNDPGVLEGLA 156
Query: 144 SFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
S Y + + A ++ E+ +L P ++D + ++ + T RS+
Sbjct: 157 SLYKDTNRIDLALDTIEKALELDPYDLDRLELKDRILRRKSSTGRSL 203
>gi|298492452|ref|YP_003722629.1| hypothetical protein Aazo_4041 ['Nostoc azollae' 0708]
gi|298234370|gb|ADI65506.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 280
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN E AI+ + +RL+PN ETYN G A ++LG+ ++A Y A L+ + +
Sbjct: 107 GNKEGAIADYNQALRLNPNDAETYNNRGNARASLGDQQNAITDYNEAIRLANNYAQAYNN 166
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+G A+ QAIR + + + Y GD +KA Y Q +L P
Sbjct: 167 RGNARATQGHKNGALADYTQAIRIDQNYAVAYNNRGNTYASQGDQQKAIADYNQAIRLNP 226
Query: 168 DNVDATKTGAQLFLKCG 184
+ A F G
Sbjct: 227 NFAPAFNNRGNAFAATG 243
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ E +RL+ N + YN G A + G+ A Y A + + +
Sbjct: 141 GDQQNAITDYNEAIRLANNYAQAYNNRGNARATQGHKNGALADYTQAIRIDQNYAVAYNN 200
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
+GD +A+ QAIR P + + + GD A
Sbjct: 201 RGNTYASQGDQQKAIADYNQAIRLNPNFAPAFNNRGNAFAATGDKRSA 248
>gi|27379691|ref|NP_771220.1| hypothetical protein blr4580 [Bradyrhizobium japonicum USDA 110]
gi|27352843|dbj|BAC49845.1| blr4580 [Bradyrhizobium japonicum USDA 110]
Length = 389
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E+A++ L + L PN + G+A+ LG+ A Y A L P D+ +
Sbjct: 88 GDAERALADLNRAIDLDPNDAIAWYNRGIAYDDLGDRDHAIADYTRAIRLKPNDALYYNN 147
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ K D A+A+ QAI+ + + + Y E G+ ++A + KL P
Sbjct: 148 RGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTAYREHGEADRALADLDMAIKLDP 207
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ A A++F G+ AR++ + L++ P++
Sbjct: 208 NYGPAYGNRARIFRDKGERARALADFGKSLQLTPNN 243
>gi|167720693|ref|ZP_02403929.1| TPR domain protein [Burkholderia pseudomallei DM98]
Length = 366
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
+ A+ K + L+P +N LG A +ALG H A + + A L P + L
Sbjct: 120 DDAVDAFKRALALTPGDASIHNNLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGM 179
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GDT A+ + R AI AEP ++ +L + IG + +A ++E L P
Sbjct: 180 ALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQP 236
>gi|398825822|ref|ZP_10584098.1| TPR repeat-containing protein, partial [Bradyrhizobium sp. YR681]
gi|398222588|gb|EJN08959.1| TPR repeat-containing protein, partial [Bradyrhizobium sp. YR681]
Length = 734
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSP--GVTKMLGEASLQYAYGNFEQAISLLKE 59
+L N G Y + + N + KL+P V + LQ A FE+A +
Sbjct: 258 QLFNLGRYAEALERFN--------AAEKLNPNSAVLYQMRGVCLQEA-NRFEEAEADYTR 308
Query: 60 VVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTA 119
+ L P LPET+N LGL +S LG + A + A L P +A+ ++
Sbjct: 309 SIALDPRLPETHNNLGLLYSRLGRMEQALAQFDRALELRPDFTAVLNNKALALLKLQLLD 368
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+A R+++ +P+ +LA+ + GD+E+ E+ KL
Sbjct: 369 EAFATFRRSLAVDPQHAPTTYNLATLQLLTGDFERGWPGREERWKL 414
>gi|167739676|ref|ZP_02412450.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 14]
Length = 376
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
+ A+ K + L+P +N LG A +ALG H A + + A L P + L
Sbjct: 120 DDAVDAFKRALALTPGDASIHNNLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGM 179
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
GDT A+ + R AI AEP ++ +L + IG + +A ++E L P
Sbjct: 180 ALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQP 236
>gi|322432943|ref|YP_004210192.1| hypothetical protein AciX9_4094 [Granulicella tundricola MP5ACTX9]
gi|321165170|gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
tundricola MP5ACTX9]
Length = 663
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 32/293 (10%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + +K+ + SP++ ++ L H+ GN A Y A L+P D+ +
Sbjct: 48 GDLSVSERFIKKAIHQSPSVATYHHHLAKTHTHQGNTLEAIKGYERAISLNPADADSIEL 107
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + G +A+ RQ + P + +L D + + Y + + FP
Sbjct: 108 LAKLLLASGTKDEALKLYRQLLSLCPDRPDVYFNLGHLLEFDDDKDASLNIYREAARRFP 167
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD-LSVIDLLVAILMENN-AYEKT 225
DN DA A+ GQT ++I E L + P DA+ + + L +L E + A E
Sbjct: 168 DNPDAHFNLARKLKAEGQTQQAINSFENVLLLKPDDAETFNYLGTLFHLLGETDKAKESY 227
Query: 226 LQHIEH------------AQIVRFSG---------KELPLKLKVKAGICYL-----RLGN 259
L I+H A ++ F K + L + A C L + GN
Sbjct: 228 LLAIKHKPDYPLALCNLGALLMDFGQWQVAEMMLRKAIELDPDLLAAYCNLGSVLAQQGN 287
Query: 260 MEKA-EILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHF-LETNAG 310
A E L LQ A HA+ + + +T+ +LG A+K +H L+ N G
Sbjct: 288 TVAAIEALRQVLQRDPA--HAEALCTLGNTMNNLGDEAGAMKCFHLALKANPG 338
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
GLAH G A Y L+P + A Q+GD + + +I++AI P
Sbjct: 7 GLAHHRAGRLSDASHCYTALLRLNPAHADALNLSGVLARQRGDLSVSERFIKKAIHQSPS 66
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+ HLA + G+ +A + YE+ L P + D+ + A+L L G ++ +
Sbjct: 67 VATYHHHLAKTHTHQGNTLEAIKGYERAISLNPADADSIELLAKLLLASGTKDEALKLYR 126
Query: 195 EYLKVHPSDADL 206
+ L + P D+
Sbjct: 127 QLLSLCPDRPDV 138
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G +QAI+ + V+ L P+ ET+N LG LG A + Y++A P
Sbjct: 182 AEGQTQQAINSFENVLLLKPDDAETFNYLGTLFHLLGETDKAKESYLLAIKHKPDYPLAL 241
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L + G A +R+AI +P ++ +L S + G+ A E+ Q+ +
Sbjct: 242 CNLGALLMDFGQWQVAEMMLRKAIELDPDLLAAYCNLGSVLAQQGNTVAAIEALRQVLQR 301
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
P + +A T G A ++ LK +P A
Sbjct: 302 DPAHAEALCTLGNTMNNLGDEAGAMKCFHLALKANPGHA 340
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A L A G ++A+ L ++++ L P+ P+ Y LG + ++ + Y AA P
Sbjct: 109 AKLLLASGTKDEALKLYRQLLSLCPDRPDVYFNLGHLLEFDDDKDASLNIYREAARRFPD 168
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ L +G T QA+ + +P D +L + + +G+ +KA ESY
Sbjct: 169 NPDAHFNLARKLKAEGQTQQAINSFENVLLLKPDDAETFNYLGTLFHLLGETDKAKESYL 228
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
K PD A L + GQ + +L + +++ P
Sbjct: 229 LAIKHKPDYPLALCNLGALLMDFGQWQVAEMMLRKAIELDP 269
>gi|13540875|ref|NP_110563.1| TPR repeat-containing protein [Thermoplasma volcanium GSS1]
Length = 242
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN+E+A+ +RL +LP+ Y G + LG + A Y AA L D +
Sbjct: 104 GNYEKALEEFNSAIRLEDDLPDYYYNRGNVYWKLGEIEKAIQDYSKAADLDYTDQIYVYK 163
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ + +AI+ P + + A +++ YE+A E+++KL P
Sbjct: 164 KYEALTSLGRYDEALETVDKAIKVVPANYNYLAMKAELLIKMKRYEEARPVIEEVEKLNP 223
Query: 168 DNVDATKTGAQLFLK 182
N DA + AQ+ +K
Sbjct: 224 GNPDAARLMAQINMK 238
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y+ ++QAI + + L PN + +N LG + +GN++ A + + A L
Sbjct: 67 YSMKAYDQAIEDFERSISLDPNSSDYHNALGSVYEDMGNYEKALEEFNSAIRLED----- 121
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPK----DISLRIHLASFY---VEIGDYEKAAE 157
L + +G+ + I +AI+ K D + +I++ Y +G Y++A E
Sbjct: 122 --DLPDYYYNRGNVYWKLGEIEKAIQDYSKAADLDYTDQIYVYKKYEALTSLGRYDEALE 179
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
+ ++ K+ P N + A+L +K + + ++EE K++P + D
Sbjct: 180 TVDKAIKVVPANYNYLAMKAELLIKMKRYEEARPVIEEVEKLNPGNPD 227
>gi|411119538|ref|ZP_11391918.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium JSC-12]
gi|410711401|gb|EKQ68908.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium JSC-12]
Length = 2384
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
++AI ++ + P+ P+ YN LGLA+ A GN SA + Y A P L
Sbjct: 992 LDEAIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPHFPQALNHLG 1051
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+ G+ A+A Y +QAI +P + + + + GD + A + Y+Q ++ P+
Sbjct: 1052 NALKELGNFAEAARYYQQAIALKPDYAKAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNF 1111
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEY 196
+A A L G R EEY
Sbjct: 1112 AEAHWNKALTLLLGGDLRRG---FEEY 1135
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 4/201 (1%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P V LG A + G E+AI+ ++ + L+ E +N LG+A+ G A Y
Sbjct: 105 PEVLSNLGNALKEL--GKLEEAIAAYQQALNLNQAYAEAHNNLGIAYKDQGKLDEALACY 162
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A L P + + Q+ A++Y RQAI +P I L S + G+
Sbjct: 163 REAIRLKPNYAEAHHNMGIVLRQQNKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGN 222
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
E+A Y+Q+ L P+ + G+ +I ++ L + P+ V +
Sbjct: 223 GEEAIACYQQVVTLKPNYAEGFNNLGLALQHQGKLEEAIATFQQALALQPNFP--GVCNN 280
Query: 212 LVAILMENNAYEKTLQHIEHA 232
L +L+E N ++ + + A
Sbjct: 281 LGNLLLEVNRVDEAIASYQQA 301
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN E+AI+ ++VV L PN E +N LGLA G + A + A L P +
Sbjct: 221 GNGEEAIACYQQVVTLKPNYAEGFNNLGLALQHQGKLEEAIATFQQALALQPNFPGVCNN 280
Query: 108 L--LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L L V + D A A Y +QAI P +L + G ++A Y++ +L
Sbjct: 281 LGNLLLEVNRVDEAIASY--QQAIAQHPNYPEALNNLGNALQRQGKLDEAITHYQKALEL 338
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
P+ V+A + + ++ LE+ + + PS A++
Sbjct: 339 RPNFVEALSNLGAVLKDQHKLEAAVSYLEQAVSLGPSYAEI 379
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 19/226 (8%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
E A+S L++ V L P+ E +N LG A+ A Y A L P+ + + L
Sbjct: 359 LEAAVSYLEQAVSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEMAEVHSNLG 418
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
G+ +A + R+AI +P + +L + G ++A +Y + +L PD
Sbjct: 419 NMLQYIGEFEEAFEHFRKAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYSKALELKPDF 478
Query: 170 VDATKTGAQLFLKCGQTARSIGILE------EYLKVHPSDA------DLSVIDLLVAILM 217
V+A A L G + E +++ +PS + D S++D +L
Sbjct: 479 VEAHWNTALNHLLLGNLKQGFEGYEWRFQWSRFIEQNPSRSYSQPRWDGSLLDGKTILLY 538
Query: 218 ENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
TLQ I + +V+ G + ++ C+ L N+ KA
Sbjct: 539 AEQGIGDTLQFIRYVPLVKAKGGRIIVE-------CHPPLINLFKA 577
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+ AI ++ + L P+ + Y +LG GN + A Y L P + + L
Sbjct: 189 LDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNNLG 248
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDN 169
+G +A+ +QA+ +P + +L + +E+ ++A SY+Q P+
Sbjct: 249 LALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPNY 308
Query: 170 VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI 229
+A + G+ +I ++ L++ P+ + + L A+L + + E + ++
Sbjct: 309 PEALNNLGNALQRQGKLDEAITHYQKALELRPNFVE--ALSNLGAVLKDQHKLEAAVSYL 366
Query: 230 EHA 232
E A
Sbjct: 367 EQA 369
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
++AI+ + ++ + N +TYN L +A G A +Y A L P +
Sbjct: 924 LDEAIAYYQNTLKANDNHLDTYNNLAVALHEQGKLDEAMPYYQKALALKPDNPDAHNNYA 983
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQ 161
++ +A+Y+ +QAI A P +L Y G++ AAE+Y Q
Sbjct: 984 NLLRERSRLDEAIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQ 1035
>gi|255594632|ref|XP_002536129.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223520752|gb|EEF26254.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 448
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 6/188 (3%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+ QA + ++L+P E + + + LG +A Y A L+P+ L
Sbjct: 1 QYSQAAQAYEAALQLNPQAAELWFNYAIVQTQLGAMAAAEQAYRKAIALNPQFFEAHGNL 60
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
T ++G +AM +Q +R +P+D +L + + G + A +SYE+ LFP+
Sbjct: 61 GTVLQKQGKLDEAMASYQQGLRIQPQDARGHFNLGTVLRDKGQLQSAVQSYERAIVLFPN 120
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILMENNAYEKTL 226
DA + + G R++ ++ L+ +P A+ ++ + L +E+ +
Sbjct: 121 YTDAYNNLGETWRDQGDMTRAVQYYQQALQRNPQHPGANYNMGEFLYLA----KRFEEAI 176
Query: 227 QHIEHAQI 234
H E +Q+
Sbjct: 177 PHFEASQL 184
>gi|405978666|gb|EKC43036.1| Tetratricopeptide repeat protein 13 [Crassostrea gigas]
Length = 1032
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G AI + K+V++L P+ E +LG A +GN K A+ + + H++P +
Sbjct: 840 YYQGKVRNAIEVFKDVLKLKPDHVEASTSLGQAFREIGNLKPAWKRFNQSVHMNPNHAQT 899
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
W+ + +G+ A + + + P +I+ + + Y+ +G Y + +S K
Sbjct: 900 WQLWGSMLYTQGEHRGARLHFDKCLDINPSNINCQYMKSLTYITMGKYYQGLKSS---MK 956
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+ +N A K + F+K L EY + S D ++DL
Sbjct: 957 VMINNTPAIKASPE-FIKA-------HYLREYARFLHSKLDTPLVDL 995
>gi|427730743|ref|YP_007076980.1| Flp pilus assembly protein TadD [Nostoc sp. PCC 7524]
gi|427366662|gb|AFY49383.1| Flp pilus assembly protein TadD [Nostoc sp. PCC 7524]
Length = 521
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+L YA FE AIS + ++ P+ E + G+A LG ++ A Y + +P
Sbjct: 231 GNLLYAAKEFEAAISSYDQALKFKPDKHEAWYNRGIALRNLGRNEEAISSYDQSVKFNPD 290
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D W G +A+ QA++ +P + +G E+A SY+
Sbjct: 291 DHQAWNNRGNTLFNLGRNEEAISSYDQAVKIKPDKHETWNNRGIALRNLGRNEEAISSYD 350
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
Q K PD A G+ +I ++ LK P
Sbjct: 351 QALKFQPDLHQAWNNRGIALFNLGRNEEAISSYDQALKFQP 391
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 10/181 (5%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AIS + ++ P+L + +N G+A LG ++ A Y A P W
Sbjct: 340 GRNEEAISSYDQALKFQPDLHQAWNNRGIALFNLGRNEEAISSYDQALKFQPDFHEAWYN 399
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ QA++ +P + + E+A SY+Q K P
Sbjct: 400 RGNALRNLGRNEEAISSYDQALKFQPDFHEAWNNRGVALFNLERNEEAISSYDQALKFQP 459
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP--------SDADLSVI--DLLVAILM 217
D A A + ++I L+ + ++P +D+D I D L LM
Sbjct: 460 DLHQAWYNKACCYALQNNVEKAIENLQIAINLNPEQCRTWAKTDSDFDSIRNDELFQELM 519
Query: 218 E 218
E
Sbjct: 520 E 520
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G E+AI+ ++ ++L+PN + YN LG A S G + A Y A L+P +
Sbjct: 108 YYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNFTQA 167
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L +G +A+ ++AI+ P +L + G ++A +Y++ +
Sbjct: 168 YYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQ 227
Query: 165 LFPDNVDA-TKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P++ +A GA L+ K G+ +I ++ ++++P+ A+
Sbjct: 228 LDPNDANAYNNLGAALY-KQGKLEEAIAAYQKAIQLNPNLAE 268
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G ++AI+ ++ ++L+PN + YN LG A G + A Y A L+P +
Sbjct: 74 YYQGKLDEAIAAYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQA 133
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L +G +A+ ++AI+ P +L + G E+A +Y++ +
Sbjct: 134 YNNLGNALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQ 193
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
L P+ DA G+ +I ++ +++ P+DA+
Sbjct: 194 LNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDAN 234
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 145/363 (39%), Gaps = 24/363 (6%)
Query: 30 LSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFD 89
LS + ++ + G + +A ++ + V+ L PNL + YN LG A G A
Sbjct: 25 LSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIA 84
Query: 90 FYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEI 149
Y A L+P D+ + L +G +A+ ++AI+ P +L + +
Sbjct: 85 AYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQ 144
Query: 150 GDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVI 209
G E+A +Y++ +L P+ A G+ +I ++ ++++P+ AD +
Sbjct: 145 GKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYAD-AYY 203
Query: 210 DLLVAILMENN------AYEKTLQ-HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEK 262
+L VA+ + AY+K +Q A G L + K++ I +K
Sbjct: 204 NLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAA-----YQK 258
Query: 263 AEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLKLA 321
A L +L A+ + L G + A+ Y ++ N + Y L
Sbjct: 259 AIQLNPNL--------AEAYNNLGVALSDQGKRDEAIAAYQKAIQLN--PNFALAYNGLG 308
Query: 322 ECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLD 381
+R AI + KA+ + A L + L ++ K +EAI LD D
Sbjct: 309 NALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPND 368
Query: 382 MNS 384
N+
Sbjct: 369 ANA 371
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI+ ++ ++L+PN YN LG A S G A Y A L+P + +
Sbjct: 281 GKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNG 340
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G +A+ ++AI+ +P D + +L G ++A +Y++ +L P
Sbjct: 341 LGNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNP 400
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ A G+ +I ++ ++++P+
Sbjct: 401 NFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPN 435
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y+ G E+AI+ ++ ++L+PN YN LG A S G A Y A L+P +
Sbjct: 414 YSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALA 473
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
+ L +G +A+ ++AI+ P +L + + G +A +Y++
Sbjct: 474 YNNLGNALSDQGKLNEAIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKALS 533
Query: 165 LFPDNVDATKTGAQLFL--KCGQTARSIGILEEYLK 198
L P++ T T A G + G LEE L+
Sbjct: 534 L-PEDTSVTPTTAHTLAHNNLGLVYQPEGKLEEALR 568
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI+ ++ ++L PN YN LGLA G A Y A L+P + +
Sbjct: 349 GKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNN 408
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G +A+ ++AI+ P +L + + G ++A +Y++ +L P
Sbjct: 409 LGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNP 468
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ A G+ +I ++ ++++P+
Sbjct: 469 NFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPN 503
>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
Length = 356
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AI K+ + +SP+ + Y++LGLA L + A + Y A L P++ +
Sbjct: 108 GKYDEAIEGYKKSIEISPDNIDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVN 167
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + +QK A+ + ++A+ D I +A+ E+ Y K+ E Y++ + P
Sbjct: 168 VASVYMQKTQFEDAIEFYKKAVNFNNNDYKSLICIANALSELKKYNKSFEYYQKALAVKP 227
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV---HPSDADLSVIDLLVAILMENNAYEK 224
D A + G ++I EEY KV P+++ +I L IL+E Y++
Sbjct: 228 DYAKAHLCYGISLSESGNIKKAI---EEYRKVIELDPTNSRGYMI--LANILVEEGLYDE 282
Query: 225 TLQHIEHA 232
+ + + A
Sbjct: 283 AVDNYKKA 290
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 62/332 (18%)
Query: 61 VRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT-----FAVQK 115
++ +P+ E Y LG + G + + Y L DS + L+ F + K
Sbjct: 19 IQETPDNVEAYFVLGTTLALSGKLEESLKTY---RELLSIDSVNVQALVNIGSTLFLMGK 75
Query: 116 GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKT 175
D A Y ++AI P+ +S ++LA+ Y EIG Y++A E Y++ ++ PDN+DA +
Sbjct: 76 VDEAIDNY--KKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKSIEISPDNIDAYSS 133
Query: 176 GAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIV 235
F + ++ LK+ P + + V + ++ M+ +E ++ + A V
Sbjct: 134 LGLAFQDLRKYDEAMENYRSALKLDPENYEHYVN--VASVYMQKTQFEDAIEFYKKA--V 189
Query: 236 RFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHS 295
F+ + K+ IC +A+ L L
Sbjct: 190 NFNNNDY------KSLIC-------------------------------IANALSELKKY 212
Query: 296 NSALKYYH-FLETNAGTDNGYLYLKLAECY-LSLKERAH---AIMFFYKALDRFEDNIDA 350
N + +YY L Y K CY +SL E + AI + K ++ N
Sbjct: 213 NKSFEYYQKALAVKPD------YAKAHLCYGISLSESGNIKKAIEEYRKVIELDPTNSRG 266
Query: 351 RLTLASLLLEEAKEEEAITLLSPPKDLDSLDM 382
+ LA++L+EE +EA+ +LD+ ++
Sbjct: 267 YMILANILVEEGLYDEAVDNYKKAIELDNTNV 298
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
S V ++ S + G ++AI K+ + L+P Y L ++ +G + A +
Sbjct: 57 SVNVQALVNIGSTLFLMGKVDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEG 116
Query: 91 YVIAAHLSPKDSALWKQL-LTFA-VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVE 148
Y + +SP + + L L F ++K D A Y R A++ +P++ +++AS Y++
Sbjct: 117 YKKSIEISPDNIDAYSSLGLAFQDLRKYDEAMENY--RSALKLDPENYEHYVNVASVYMQ 174
Query: 149 IGDYEKAAESYEQ 161
+E A E Y++
Sbjct: 175 KTQFEDAIEFYKK 187
>gi|354557656|ref|ZP_08976914.1| Tetratricopeptide TPR_2 repeat-containing protein
[Desulfitobacterium metallireducens DSM 15288]
gi|353550450|gb|EHC19887.1| Tetratricopeptide TPR_2 repeat-containing protein
[Desulfitobacterium metallireducens DSM 15288]
Length = 385
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 30/255 (11%)
Query: 24 KGSKNKLSPGVTKMLGEASLQYAY-----------GNFEQAISLLKEVVRLSPNLPETYN 72
+G N+ + G+ K L A+ G++E AI +L + +R +P +
Sbjct: 97 QGLLNEAADGIKKALDREPYNAAFLELQADIVLEQGDWEAAIEVLNKAIRTNPQNTDMLF 156
Query: 73 TLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIR-A 131
LG ++ G+H A Y + P+ + W+ +Q AQA +A+R
Sbjct: 157 RLGTIYTFHGDHLEALRCYQGCCEIKPRRAEYWEMKAESHLQLKQMAQAAVSFDRALRYG 216
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
DI R LA YV++ + +K ++ + K PD+ D A ++ GQ+ ++
Sbjct: 217 VNPDIVAR--LAYCYVQLNELKKGIHYFKMVLKYEPDHYDTLCNLAAVYQNMGQSLDALH 274
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYE-----KTLQHIEHAQIVRFSGKELPLKL 246
E+ + SD IL+ N AY ++ + E+ +E PL L
Sbjct: 275 FQEKAYSLCKSD----------PILLNNMAYTLVQLGRSRKATEYYHEALKLTQENPLIL 324
Query: 247 KVKAGICYLRLGNME 261
+C+ + GN E
Sbjct: 325 -YNLAVCHAQKGNWE 338
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 19/231 (8%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
GL + A K A D P ++A + +++GD A+ + +AIR P+
Sbjct: 98 GLLNEAADGIKKALD-------REPYNAAFLELQADIVLEQGDWEAAIEVLNKAIRTNPQ 150
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILE 194
+ + L + Y GD+ +A Y+ ++ P + + A+ L+ Q A++ +
Sbjct: 151 NTDMLFRLGTIYTFHGDHLEALRCYQGCCEIKPRRAEYWEMKAESHLQLKQMAQAAVSFD 210
Query: 195 EYLK--VHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGI 252
L+ V+P ++ L ++ N +K + + + ++++ + A
Sbjct: 211 RALRYGVNP-----DIVARLAYCYVQLNELKKGIHYFK--MVLKYEPDHYDTLCNLAA-- 261
Query: 253 CYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH 303
Y +G A + F + + L+ +A TL+ LG S A +YYH
Sbjct: 262 VYQNMGQSLDA-LHFQEKAYSLCKSDPILLNNMAYTLVQLGRSRKATEYYH 311
>gi|148264105|ref|YP_001230811.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146397605|gb|ABQ26238.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 573
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALG-NHKSAFDFYVIAAHLSPKDSALWK 106
GN +++I+ +K+V+ L+PN + N LG ++ LG N A + A L P D +
Sbjct: 434 GNKDESIARMKKVIALAPNDAQALNYLGYTYAELGVNLDEALQYLNKAVLLRPDDGFILD 493
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L + QA++++ +A++ +D ++ HLA Y +Y KA Y ++ +L
Sbjct: 494 SLGWAYYKMKRYDQAVFHLERAVQLVDEDATIIGHLADAYFANREYRKALTRYRRVLQLE 553
Query: 167 PDNVDATKTGAQLFLKCGQ 185
P+ D + ++ + G+
Sbjct: 554 PERKDIAEKIKKIMAETGE 572
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 113 VQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
V +GD A+ ++ A+ A+PK LR +A Y+++ ++ A ES + KL P V+A
Sbjct: 57 VLEGDFDGALSLLQAAVEADPKSAFLRKSIAQVYLQMNRFQDALESCQTAIKLDPGFVEA 116
Query: 173 TKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
+ + + +I ++ L++ PS D I L +AI AY K ++ E
Sbjct: 117 QILAGNILVGLQRDKEAIPYYKKALEIDPSKED---IYLHLAI-----AYVKGFEYEEAV 168
Query: 233 QIVRFSGKELPLKLKVKAGICYLRLG 258
++ + LK+ + I Y LG
Sbjct: 169 NTLK-----VLLKVNPDSAIGYYYLG 189
>gi|260827024|ref|XP_002608465.1| hypothetical protein BRAFLDRAFT_283157 [Branchiostoma floridae]
gi|229293816|gb|EEN64475.1| hypothetical protein BRAFLDRAFT_283157 [Branchiostoma floridae]
Length = 574
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+ G A G +E AI + +P+ + Y + G ALG K A Y A
Sbjct: 118 LAGRAGCNIMLGKYEDAIMDAVQATDFAPDCIDAYCSHGECLLALGRPKEATAVYTKAQM 177
Query: 97 LSPKDSALWK---------QLLTFA---VQKGDTAQAMYYIRQAIRAEPKDISLRIHLAS 144
L PK+ A+ L +FA + KGD + ++Y+ +AI+ P+ R++
Sbjct: 178 LEPKNQAISSDLRVAKDLIHLQSFAERDMDKGDYRRVLFYMDKAIKQVPQCAKYRVYKGE 237
Query: 145 FYVEIGDYEKAAESYEQIQKLFPDNVDA 172
V + +Y +A E ++ + P NVDA
Sbjct: 238 SMVMMRNYSEAHEVLSEVLEYQPQNVDA 265
>gi|114645545|ref|XP_520818.2| PREDICTED: transmembrane and TPR repeat-containing protein 1
isoform 2 [Pan troglodytes]
gi|410222758|gb|JAA08598.1| transmembrane and tetratricopeptide repeat containing 1 [Pan
troglodytes]
gi|410267274|gb|JAA21603.1| transmembrane and tetratricopeptide repeat containing 1 [Pan
troglodytes]
gi|410301990|gb|JAA29595.1| transmembrane and tetratricopeptide repeat containing 1 [Pan
troglodytes]
Length = 882
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 565 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGV 624
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ A E Y++ ++
Sbjct: 625 FLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE 684
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I +E + PS +L + + ++A++ + EK HI
Sbjct: 685 ILSPLGA-LYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 743
>gi|340959724|gb|EGS20905.1| hypothetical protein CTHT_0027440 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1012
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
G RK +K L P + + A+ + G++E I+ L E++R++ + + L H
Sbjct: 111 GPRKPAK--LPPEIQFRMSLANEAFQQGDYEGTIAQLSEIIRINSEVFNAWMLLSTVHEQ 168
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAV-----------QKGDTAQAMYYI-RQA 128
LGN + A + AAHL+P+D W +A+ +K + Q Y QA
Sbjct: 169 LGNREQAIWCRISAAHLTPRDVQQWISTAEYALESIDELEDGTPEKDEVLQRAYACYTQA 228
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFL 181
+ + +I R A + +G+ KA Y++ P N+ + A + L
Sbjct: 229 LETDRSNIVARTGRADVIMMMGNASKALIEYQKALNYKPWNIRTVRNIADVAL 281
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 239 GKELPLKLKVKAGICYLRLGNMEKAEI---LFADLQWKNAIDHADLITEVADTLMSLGHS 295
G LP L+ K + +LG +A++ L + ++ + D + ++A L+ G +
Sbjct: 392 GMGLPTDLRAKLYVYRCKLGLEYEADLHLQLLDPTRQEDFMAFPDCLKDIATALLDAGRA 451
Query: 296 NSALKYYHFLETNAGTDNG--------YLYLKLAECYLSLKERAHAIMFFYKALDRFEDN 347
+ A++Y ++ + T NG +L + C+++ ++A A F A++ ED+
Sbjct: 452 SEAVRYLDLYKSISTTINGPENSLDADFLVCQ-GRCHMAFGDKAAAEECFIAAIEEDEDH 510
Query: 348 IDARLTLASL 357
I+AR+ LA++
Sbjct: 511 IEARVQLANM 520
>gi|334119849|ref|ZP_08493933.1| glycosyl transferase family 2 [Microcoleus vaginatus FGP-2]
gi|333457490|gb|EGK86113.1| glycosyl transferase family 2 [Microcoleus vaginatus FGP-2]
Length = 1533
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G E+AI+ ++ +++ PN Y TLG A A G + A +Y A + P + ++
Sbjct: 25 GKVEEAIASCEQALKIHPNFAPAYKTLGNALQAQGRMEEARHWYAKAIEIEPNFAEVYAN 84
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + Q+ +A+ + ++AI +P + +LA + +I E+A + + Q L P
Sbjct: 85 LGSLGAQQQKWQEAIGFYQKAITIKPNFAGVYRNLAKVFGQISKPEEAQQCWYQAFSLEP 144
Query: 168 DNVDATK--TGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
+ V + F + + +I + +K++P+ A
Sbjct: 145 EKVAPGEHLNMGDAFFRQEKFPEAIACYDRAIKLNPNVA 183
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 130/348 (37%), Gaps = 79/348 (22%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P K+L E +A G EQAIS K+ +++ P P Y LG A A G A Y
Sbjct: 275 PEAYKILAEG--YFAQGKLEQAISACKKALQIKPEAP-LYKMLGNALQAGGKIDEAKSCY 331
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
V A ++P FA A A Y S +
Sbjct: 332 VKAIEINP----------NFA-----EAYANY-------------------GSICAQQEQ 357
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDL 211
+++A +YE+ L PD A + +L + G++ + L + P A +
Sbjct: 358 WQQAISAYEKAIALKPDFAGAFRNFGKLLSQLGKSEEAAEAWYRALAIDPKSATAEEHEN 417
Query: 212 LVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQ 271
L L+E +K ++ A ++L AG Y LG EIL Q
Sbjct: 418 LAKTLIEQGKVDKGIECYRRA-----------VELNPNAGAAYHELG-----EILRNQEQ 461
Query: 272 WKNAID-HADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKER 330
W+ A+D +++ I + +S H+N LAE + L+
Sbjct: 462 WEAAVDAYSNAIRN--NPELSWSHNN-----------------------LAESLVKLERW 496
Query: 331 AHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD 378
A+ + KA++ D + LA +LL+ + EEA+ +L+
Sbjct: 497 EEAVNAYRKAIELNPDFSWSHNNLADVLLKLERWEEAVNAYRKATELN 544
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 146/352 (41%), Gaps = 26/352 (7%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
KMLG A LQ A G ++A S + + ++PN E Y G + + A Y A
Sbjct: 312 KMLGNA-LQ-AGGKIDEAKSCYVKAIEINPNFAEAYANYGSICAQQEQWQQAISAYEKAI 369
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH--LASFYVEIGDYE 153
L P + ++ Q G + +A +A+ +PK + H LA +E G +
Sbjct: 370 ALKPDFAGAFRNFGKLLSQLGKSEEAAEAWYRALAIDPKSATAEEHENLAKTLIEQGKVD 429
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP--SDADLSVIDL 211
K E Y + +L P+ A ++ Q ++ ++ +P S + ++ +
Sbjct: 430 KGIECYRRAVELNPNAGAAYHELGEILRNQEQWEAAVDAYSNAIRNNPELSWSHNNLAES 489
Query: 212 LVAILMEN---NAYEKTLQHIEHAQIVRFSGKELPLKL-KVKAGICYLRLGNMEKAEILF 267
LV + NAY K ++ + ++ LKL + + + R KA L
Sbjct: 490 LVKLERWEEAVNAYRKAIELNPDFSWSHNNLADVLLKLERWEEAVNAYR-----KATELN 544
Query: 268 ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYH-FLETNAGTDNGYLYLKLAECYLS 326
D W + +AD L+ LG A+ Y +E N D+ + + LAE ++
Sbjct: 545 PDFSWSH--------NYLADALIKLGRWEEAISAYQRSIELN--PDHFWAHNNLAEALVN 594
Query: 327 LKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD 378
L+ A++ + +A + + ++ L LLE + EEAI + +L+
Sbjct: 595 LERWDEAVVAYRRANEVNPNFFWSQSKLGDALLEMERWEEAIDVYRRAAELN 646
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 9/186 (4%)
Query: 2 ELINYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGE--ASLQYAYGNFEQAISLLKE 59
E++ G + K ++ G + SPG+ E ASLQ G +A++ ++
Sbjct: 776 EVLKKKGVSRGAEKSDRGVRGHSGKAIEHSPGIAAEYHELGASLQEE-GKLTEAVAAYRK 834
Query: 60 VVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ--LLTFAVQKGD 117
+ ++PN T++ LG LG + Y AA L+P S +W L ++G
Sbjct: 835 AISINPNYFGTHHNLGDVLKWLGKVDESIKSYQKAAELNP--SFVWAHHNLADVFQEEGR 892
Query: 118 TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD--NVDATKT 175
+A+ R+AI P +LA + +A E Y+ KL P +D
Sbjct: 893 LDEAVAAYRKAIEVAPDFGWSHYNLAKTLAKQDKLSEALEEYQTASKLDPKLFGLDYQNV 952
Query: 176 GAQLFL 181
LFL
Sbjct: 953 RDSLFL 958
>gi|291278873|ref|YP_003495708.1| hypothetical protein DEFDS_0458 [Deferribacter desulfuricans SSM1]
gi|290753575|dbj|BAI79952.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 530
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYN------TLGLAHSALGNHKSAF--DFYVIAAHLSP 99
G++ +AI +L E++ L+P+ Y LGL L + + A+ D Y +A +
Sbjct: 142 GDYAKAIGVLDELIGLNPSSAYYYQRGTLYLKLGLEKKGLKDLEQAYKNDKYPLALY--- 198
Query: 100 KDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
+L + ++KGD +A+ Y+ + P+ SL+ L Y+++ +Y+KA E +
Sbjct: 199 -------KLADYYLKKGDKEKAVKYLSSVVNKHPEQASLKFQLGRLYMDLKEYDKAVEIF 251
Query: 160 EQIQKLFPDN----VDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
E+++K DN A K A ++ R++ ++ +++ D
Sbjct: 252 EELEK--SDNELLKTTAMKQLASIYFDKKVYDRALSYFKKIIEIKNDDV 298
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
+A++ Y G +E+AIS+LKE V+ + E Y L + + L + K+A + + ++P
Sbjct: 371 KAAIFYDKGEYEKAISVLKEGVKAGNDDEEIYFDLAINYEKLKDVKNAEKYLLKVIEINP 430
Query: 100 KDSALWKQLLTFAVQKG---DTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAA 156
++++ L +KG D A + I++A+ EP + + + + + G Y K+
Sbjct: 431 RNASALNFLGYMYAEKGIKLDDAYKL--IKKALEIEPDNPAYIDSIGWVFYQKGLYSKSF 488
Query: 157 E 157
E
Sbjct: 489 E 489
>gi|404496367|ref|YP_006720473.1| lipoprotein [Geobacter metallireducens GS-15]
gi|78193973|gb|ABB31740.1| TPR domain lipoprotein [Geobacter metallireducens GS-15]
Length = 729
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 145/345 (42%), Gaps = 19/345 (5%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
Y G++ +A K +++ P E Y+ LGL GN K AF + A L+P+
Sbjct: 39 YDKGDYAKAALEFKNAIQIDPKYAEAYHMLGLVEMKKGNIKGAFGNFTKAVELNPQHQEA 98
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
QL + G +AM + ++ P ++ + + + KA E E +
Sbjct: 99 RLQLGRIYLGAGAPDEAMKEAVEVLKINPASEDAQLLKGAVLIARKEKGKARELLEGLVA 158
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
DA A + G + IL + L ++PS +DL + L + + ++
Sbjct: 159 KGVKKPDAYSLLASIHALDGNAKDAEAILRKGLAINPSSSDLHLT--LAGLCVGTGRTDE 216
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITE 284
+ ++ ++V +LK+ A +C+ G + +A DL A + + +
Sbjct: 217 AISLLQ--RVVSLEPGRTDHRLKL-AALCW-DTGKVAEARKALTDL-VAIAPEKEENRLQ 271
Query: 285 VADTLMSLGHSNSALKYYHFLETNAGTDNGY-LYLKLAECYLSLKERAHAIMFFYK--AL 341
A L G ++ A K E AG Y L LA+ YL+ + A+ + L
Sbjct: 272 AAGFLAGKGEADEAEKLLK--EGIAGKGKNYKLRFALADLYLNTGKGDQAVTLLTETAGL 329
Query: 342 DRF--EDNIDARLTLASLLLEEAKEEEAITLLS-----PPKDLDS 379
D+ ++++ A+ LA + L+ + +EA+ L++ PK+ D+
Sbjct: 330 DKASRQESLQAKNALAQIALDRNRVDEAVKLVTEVLKESPKNTDA 374
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G QA++ + VV +P + L AH AFD A + P++
Sbjct: 386 GEGAQAVAEYRTVVTDNPQSVPGFIRLAEAHLLNREKNLAFDNLQNALKIDPENRDALVA 445
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + V + D A +R+ + P D+ + L ++ GD ++A Y ++++ P
Sbjct: 446 LARYHVMQKDMKNAEAALRKVLAKSPNDLEAKAELGDLFLAAGDLKRAEAEYGELKRKAP 505
Query: 168 D-NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
V K G ++L G++ +++ LE+ ++++PS
Sbjct: 506 GLPVGYVKMG-DIYLHRGKSDKALAELEQAVRLNPS 540
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 3/161 (1%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G+ ++A + E+ R +P LP Y +G + G A A L+P L
Sbjct: 486 AAGDLKRAEAEYGELKRKAPGLPVGYVKMGDIYLHRGKSDKALAELEQAVRLNPSSELLA 545
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
L + G +A + + Q ++ P D + L V Y KA ++YE+ L
Sbjct: 546 GSLARLYTRLGKFDKAEFLLDQRLKQNPNDAASYTLLGQMNVARNQYGKARQAYEKALSL 605
Query: 166 FPDNVDATKTGAQLFLKCGQTA---RSIGILEEYLKVHPSD 203
N A A L + G A R++ ++E+ + P D
Sbjct: 606 NGSNWSAANDLAFLLAETGSGADLDRALTLIEKVKQSRPDD 646
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 20/177 (11%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPE--------TYNTLGLAHSALGNHKSAFDFYV 92
A L G ++AISLL+ VV L P + ++T +A + K+ D
Sbjct: 205 AGLCVGTGRTDEAISLLQRVVSLEPGRTDHRLKLAALCWDTGKVAEA----RKALTDLVA 260
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
IA P+ Q F KG+ +A +++ I + K+ LR LA Y+ G
Sbjct: 261 IA----PEKEENRLQAAGFLAGKGEADEAEKLLKEGIAGKGKNYKLRFALADLYLNTGKG 316
Query: 153 EKAAESYEQIQKL----FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
++A + L +++ A AQ+ L + ++ ++ E LK P + D
Sbjct: 317 DQAVTLLTETAGLDKASRQESLQAKNALAQIALDRNRVDEAVKLVTEVLKESPKNTD 373
>gi|332839885|ref|XP_003313873.1| PREDICTED: transmembrane and TPR repeat-containing protein 1
isoform 1 [Pan troglodytes]
Length = 774
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 457 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGV 516
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ A E Y++ ++
Sbjct: 517 FLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE 576
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I +E + PS +L + + ++A++ + EK HI
Sbjct: 577 ILSPLGA-LYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 635
>gi|389775779|ref|ZP_10193644.1| putative sulfotransferase [Rhodanobacter spathiphylli B39]
gi|388437020|gb|EIL93846.1| putative sulfotransferase [Rhodanobacter spathiphylli B39]
Length = 530
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 36 KMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAA 95
++L +A G+ +QA SL V+++ P PE GLA AL A + AA
Sbjct: 12 ELLAQAGAALNRGDSQQAGSLAMRVLQVDPRHPEANYVAGLAAMALRRLPQALEHLHKAA 71
Query: 96 HLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKA 155
L P+ + Q V+ T +A+ A+ +P D L L + Y++ +E+A
Sbjct: 72 SLQPRHAGYAVQFARALVRAHRTGEALQVANVALSLDPADPMLLDLLGTVYMQCHAHERA 131
Query: 156 AESYEQIQKLFPDN 169
Y + L PDN
Sbjct: 132 GALYRRAAGLLPDN 145
>gi|346322056|gb|EGX91655.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
putative [Cordyceps militaris CM01]
Length = 950
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+T L + + G + +A+ L+ EV+R++ + + L G A +
Sbjct: 69 ITARLSRVNQAFLAGEYNRALELVSEVIRINAETFQAWTALAAIFREQGELDRALAAMMY 128
Query: 94 AAHLSPKDSALWKQLLTFAV------QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
AAHL PKD W ++A+ ++ + A A+RA+P ++ R+ AS
Sbjct: 129 AAHLRPKDIGGWMSCASYALDNVGGSEEANLKTARLCFSAALRADPHNVEARLGKASVCH 188
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQ 178
E G Y +A Y I + P ++D + A+
Sbjct: 189 EQGHYAQAILEYNYILRQRPVDLDIVRKLAE 219
>gi|88603844|ref|YP_504022.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88189306|gb|ABD42303.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 643
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 20/309 (6%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
S + ++G ++ G+ A++ LK P + + LG +SAL + A
Sbjct: 105 SENSSALIGRGAVYARNGDLMSALADLKNATAFHPRNAQAHAGLGDIYSALNETEQALRE 164
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y IA +LSPK+ + G +A A++ KD L
Sbjct: 165 YGIAINLSPKNYEFHVKKAELLYDSGRYNEAAKEYDNALKLNLKDARSWKRLGEMLRLSN 224
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
E+AA +Y+Q+ L PDN D A+L K G+ S I + +K P + +D
Sbjct: 225 RLEEAAVAYKQLNTLIPDNPDNLFIEAELLEKTGKYKESREIYAQLVKDDPKN-----VD 279
Query: 211 LLVAILMENNA---YEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF 267
LLVA+ N ++++ A +V S ++ L G Y N++K + F
Sbjct: 280 LLVALARVQNVLGEFDESAAISRSALMVNQSNADVWANL----GFSY---ANLKKFDASF 332
Query: 268 ADLQWKNAIDHAD--LITEVADTLMSLGHSNSALKYYHFLE-TNAGTDNGYLYLKLAECY 324
I D IT V LM G AL Y F T D+ +++ A
Sbjct: 333 DAFNQSLKIQPNDPITITNVGFLLMQSGRYQDAL--YRFENATMIDPDDPATWMQKARAE 390
Query: 325 LSLKERAHA 333
L+L +R A
Sbjct: 391 LALGKRDDA 399
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V ++ A +Q G F+++ ++ + + ++ + + + LG +++ L ++FD +
Sbjct: 278 VDLLVALARVQNVLGEFDESAAISRSALMVNQSNADVWANLGFSYANLKKFDASFDAFNQ 337
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
+ + P D + +Q G A+Y A +P D + + A + +G +
Sbjct: 338 SLKIQPNDPITITNVGFLLMQSGRYQDALYRFENATMIDPDDPATWMQKARAELALGKRD 397
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
A S + KL P + DA + Q + E L+++P D LV
Sbjct: 398 DAQRSATRATKLAPYSYDAWYLLGDVAAVNKQYDVAKEAFETALQINPMKED--AFKYLV 455
Query: 214 AILMENNAYEKTLQHIEHA 232
++ + N T+ + + A
Sbjct: 456 EVMRQLNQAYDTIHYYDRA 474
>gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 436
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 15/224 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + AI K+ +++ P+ + LG ++ L A D Y A L P + K
Sbjct: 206 GGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMELDPGSTKYRKY 265
Query: 108 LLTFAV--------QKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESY 159
+ + ++G +A+ Y + IR I+ Y ++G Y A +
Sbjct: 266 IADVYLVMGKEALYKEGKPQEAIEYFDKTIRMIANHITAWFSKGVAYKKLGAYRNATACF 325
Query: 160 EQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILM 217
++ ++ P N A AQ+ K G +I E ++ PS DA V +LL+
Sbjct: 326 LKVVEMDPQNGHAYYEMAQILEKTGNNEEAIRCYLETIRCDPSHTDAMYKVGNLLMEGGD 385
Query: 218 ENNA---YEKTLQHIEHAQIVRFS-GKELPLKLKVK-AGICYLR 256
NA +++ L I + + F+ GK L + + K A C+ R
Sbjct: 386 YKNAIAYFDRVLDKIPESSVAWFAKGKALQRRGQQKDADRCFER 429
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 132/336 (39%), Gaps = 40/336 (11%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
+A+ + + +++ P + G+A LG A + A + W +
Sbjct: 108 EAVEICNKTLKIHPEYGPALHEKGMALWTLGKRDEAMSLFEQAKKIHASYPYPWDLKGRY 167
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+K +A+ +A+ +P+D L + ++IG Y A + +++ K+ PD
Sbjct: 168 LFEKRQYHEAIEAYEEALEKKPQDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRPDYTA 227
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSD-------ADLSVIDLLVAILMENNA--- 221
A + Q +I EE +++ P AD+ ++ A+ E
Sbjct: 228 AWLLLGNSYKVLNQFDEAIDAYEEAMELDPGSTKYRKYIADVYLVMGKEALYKEGKPQEA 287
Query: 222 ---YEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF---ADLQWKNA 275
++KT++ I + FS G+ Y +LG A F ++ +N
Sbjct: 288 IEYFDKTIRMIANHITAWFS-----------KGVAYKKLGAYRNATACFLKVVEMDPQNG 336
Query: 276 IDHADLITEVADTLMSLGHSNSALKYYHFLET----NAGTDNGYLYLKLAECYLSLKERA 331
HA E+A L G++ A++ Y LET + TD Y K+ + +
Sbjct: 337 --HA--YYEMAQILEKTGNNEEAIRCY--LETIRCDPSHTDAMY---KVGNLLMEGGDYK 387
Query: 332 HAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEA 367
+AI +F + LD+ ++ A L ++++A
Sbjct: 388 NAIAYFDRVLDKIPESSVAWFAKGKALQRRGQQKDA 423
>gi|398819227|ref|ZP_10577787.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
gi|398230100|gb|EJN16162.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
Length = 392
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ E+A++ + L P P+ + G+A+ LG+ A Y A L+ +D +
Sbjct: 91 GDAERALADFNRAIDLDPGHPDLWYNRGIAYDDLGDTDHAITDYTRAIRLNARDPLYYNN 150
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ K D A+AM QAI+ PK + + Y + + ++A ++ KL P
Sbjct: 151 RGNSLIHKNDYARAMADYDQAIKLNPKFALAYFNRGTAYRDHHEDDRALADFDLSIKLDP 210
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSD 203
+ A A+++ G AR++ L++ P++
Sbjct: 211 NYGPAYGNRARVYRDRGDRARALADFGRSLQLSPNN 246
>gi|113477065|ref|YP_723126.1| hypothetical protein Tery_3569 [Trichodesmium erythraeum IMS101]
gi|110168113|gb|ABG52653.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 314
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++ AI + +++ P+ +N G A LG A + + +A ++ P W
Sbjct: 26 GKYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYN 85
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ +AI+ +P +L + +G Y++A E+Y+Q K+ P
Sbjct: 86 RGNLLNDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQQATKIKP 145
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+ ++ G+ RS+ E+ +K+ P+
Sbjct: 146 NLYQGWYNEGRVLFDLGRYQRSLKSFEQVIKLKPN 180
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 65/152 (42%), Gaps = 34/152 (22%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++AIS ++ +++ P+ + + LG++ + LG+++ AF+ Y A + P
Sbjct: 94 GRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQQATKIKPN------- 146
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ Q E + + ++G Y+++ +S+EQ+ KL P
Sbjct: 147 -----------------LYQGWYNEGRVL----------FDLGRYQRSLKSFEQVIKLKP 179
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
++ A + G I E+ ++V
Sbjct: 180 NHYRAWNFKGKTLFYLGDAEGEIMSYEKAIEV 211
>gi|383454518|ref|YP_005368507.1| hypothetical protein COCOR_02522 [Corallococcus coralloides DSM
2259]
gi|380728694|gb|AFE04696.1| hypothetical protein COCOR_02522 [Corallococcus coralloides DSM
2259]
Length = 271
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E A+ KE + L P P+ + LGL ++ G + A A L P+D+ +L
Sbjct: 95 EMAVEEYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQSAIELDPQDAFPRHELAA 154
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ +GD ++ +++ +R EP + ++ L Y + G Y +A +YE+ + L
Sbjct: 155 LMMDEGDYRSSITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYERARAL 209
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 7/211 (3%)
Query: 67 LPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIR 126
L + +NT G+ + G A + A L P + L T +K +A+
Sbjct: 10 LSDEHNTRGIELADRGWLDEAIKEFKKAIDLDPTSAHAHDNLATVYAEKKQFREALGEYL 69
Query: 127 QAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQT 186
A++ EP+ + +LA F + E A E Y++ +L P+ DA + G+
Sbjct: 70 TALKLEPESATAHYNLACF-LSTHASEMAVEEYKEAIELDPEYPDAHLNLGLTYADQGRV 128
Query: 187 ARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKL 246
++ L+ +++ P DA L A++M+ Y ++ ++ ++VR +L
Sbjct: 129 EEAMRELQSAIELDPQDA--FPRHELAALMMDEGDYRSSITQLK--EVVRLEPDNFEAQL 184
Query: 247 KVKAGICYLRLGNMEKAEILFADLQWKNAID 277
+ GICY + G +AE + + NA D
Sbjct: 185 DL--GICYAQKGFYAEAERAYERARALNAED 213
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 35/159 (22%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++AI K+ + L P ++ L ++ + A Y+ A L P+ +
Sbjct: 25 GWLDEAIKEFKKAIDLDPTSAHAHDNLATVYAEKKQFREALGEYLTALKLEPESATAHYN 84
Query: 108 L----------------------------------LTFAVQKGDTAQAMYYIRQAIRAEP 133
L LT+A Q G +AM ++ AI +P
Sbjct: 85 LACFLSTHASEMAVEEYKEAIELDPEYPDAHLNLGLTYADQ-GRVEEAMRELQSAIELDP 143
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDA 172
+D R LA+ ++ GDY + +++ +L PDN +A
Sbjct: 144 QDAFPRHELAALMMDEGDYRSSITQLKEVVRLEPDNFEA 182
>gi|71064035|gb|AAZ22462.1| Tfc4p [Saccharomyces cerevisiae]
Length = 1025
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 21 GRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSA 80
GR++ + L P V ++L +A+ + + + A L EV++ Y TLG +
Sbjct: 116 GRQRKER-VLDPEVAQLLSQANEAFVRNDLQVAERLFNEVIKKDARNFAAYETLGDIYQL 174
Query: 81 LGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRI 140
G + + +AAHL+ D WK + + QA+Y + I P +
Sbjct: 175 QGRLNDCCNSWFLAAHLNASDWEFWKIVAILSADLDHVRQAIYCFSRVISLNPMEWESIY 234
Query: 141 HLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVH 200
+ Y + G +A + ++++ P + + + A L++ +T SI E Y+KV
Sbjct: 235 RRSMLYKKTGQLARALDGFQRLYMYNPYDANILRELAILYVDYDRTEDSI---ELYMKVF 291
Query: 201 PSDAD 205
++ +
Sbjct: 292 NANVE 296
>gi|357026063|ref|ZP_09088171.1| sulfotransferase [Mesorhizobium amorphae CCNWGS0123]
gi|355542027|gb|EHH11195.1| sulfotransferase [Mesorhizobium amorphae CCNWGS0123]
Length = 549
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A +L ++V+ PN + LGL G + D + L PK++
Sbjct: 16 GRRQEAETLYRQVLAQKPNHAAALHFLGLLLHQTGRSEEGLDLIEQSVTLQPKNADFLNN 75
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T G A+ + R A+ P ++ R +L S ++G +E A E Y P
Sbjct: 76 FGTVMRDLGRVDAAVDFFRGAVDIRPDQLAARDNLGSALKQLGQFEGAEEIYRGTIGRNP 135
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
+V A A+ + G+ ++ + E L P DA+L
Sbjct: 136 FHVRARIGLAETLQEAGRLDGALAVFREALTFRPKDAEL 174
>gi|239906454|ref|YP_002953195.1| hypothetical protein DMR_18180 [Desulfovibrio magneticus RS-1]
gi|239796320|dbj|BAH75309.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 204
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G++ AI + V+L + G AH AL ++ A D Y +A KD+ L
Sbjct: 76 AMGDYNAAIDDYSKAVQLDASYVSAIYNRGNAHFALRHYDQAIDDYSLALETDAKDAKLL 135
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ +KG+ AM AI A P D L ++ Y +G+ +KA E + Q++KL
Sbjct: 136 NNRGSAWFKKGNLQSAMANFALAIEASPDDPDLYLNRGKVYEALGEPDKAREDFLQVKKL 195
Query: 166 FP 167
P
Sbjct: 196 DP 197
>gi|167903761|ref|ZP_02490966.1| TPR domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167912023|ref|ZP_02499114.1| TPR domain protein [Burkholderia pseudomallei 112]
gi|217421212|ref|ZP_03452717.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|386860885|ref|YP_006273834.1| hypothetical protein BP1026B_I0779 [Burkholderia pseudomallei
1026b]
gi|418533355|ref|ZP_13099222.1| TPR domain-containing protein [Burkholderia pseudomallei 1026a]
gi|217396624|gb|EEC36641.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|385361390|gb|EIF67275.1| TPR domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385658013|gb|AFI65436.1| TPR domain-containing protein [Burkholderia pseudomallei 1026b]
Length = 614
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|148263817|ref|YP_001230523.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146397317|gb|ABQ25950.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 207
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 75 GLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPK 134
GL + G+++ A + + ++P D+A W L T + G+ +A ++QA+R P
Sbjct: 69 GLELNRSGSYREAAEAFRKVIAITPADAAAWFNLGTASAFLGNHEEAAASLKQAVRLNPD 128
Query: 135 DISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCG--QTARSIGI 192
+ +L Y +G +++A E+Y Q+ +L PD+ +A + G +AR
Sbjct: 129 FLPAYGNLGGIYYRLGRFQEAIEAYGQVLRLKPDDANARFNRGMAYYAMGDKDSAR---- 184
Query: 193 LEEYLKVHPSDADLSVIDLLVAI 215
+EY + P D +L+ LL AI
Sbjct: 185 -KEYDMLKPLDGELAA-KLLEAI 205
>gi|392390699|ref|YP_006427302.1| hypothetical protein Ornrh_1333 [Ornithobacterium rhinotracheale
DSM 15997]
gi|390521777|gb|AFL97508.1| tetratricopeptide repeat protein [Ornithobacterium rhinotracheale
DSM 15997]
Length = 459
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
+ +E+AI + KE L T+ +G A+ +L ++A + + A H P+ W
Sbjct: 248 FDKYEEAIEVYKEAAELEYTTATTFMKIGQAYLSLDQKENALEAFHTAIHEDPQLDKAWY 307
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ + G +A+ YI +AI + +++ A ++V++GD E A Y+ I KL
Sbjct: 308 EAALVYEELGQYQEALQYINRAIELDETNVTYHKRKAYYFVQMGDLEAAEVCYQTILKL 366
>gi|186471657|ref|YP_001862975.1| hypothetical protein Bphy_6918 [Burkholderia phymatum STM815]
gi|184197966|gb|ACC75929.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum
STM815]
Length = 847
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A + + +RL P+ E +N LGL G A + + A L+P L
Sbjct: 543 GKMQEAAAEYRTAIRLDPSDAEPHNNLGLLLKDEGRGDEAMEHFRTAIALAPTLGELHNS 602
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +G + A+ RQAIR +P++ +L + + + G ++AA Y + Q+L P
Sbjct: 603 LGGLWEDRGRSDLAIEEYRQAIRLQPRNAGAHNNLGNIWRKEGRLDEAAAEYLEAQRLAP 662
Query: 168 D 168
D
Sbjct: 663 D 663
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A + E RL+P+L E + LG ALG + A Y A L P +A
Sbjct: 645 GRLDEAAAEYLEAQRLAPDLGEPHTGLGDVWDALGRLEDAISEYHAAIRLDPHLNAPHNN 704
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L V++G +A+ ++AIR EP+ + L + +G + A Y +L P
Sbjct: 705 LGNILVKQGKANEAVAEYQEAIRLEPRLATQHNGLGNALHALGKDDDAIAEYNTAIRLDP 764
Query: 168 DNVDA 172
+VDA
Sbjct: 765 MSVDA 769
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK--DSALW 105
G +A++ +E +RL P L +N LG A ALG A Y A L P D+
Sbjct: 713 GKANEAVAEYQEAIRLEPRLATQHNGLGNALHALGKDDDAIAEYNTAIRLDPMSVDAHTG 772
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
++ A K + A+A Y + AIR P+ +L+ Y E G + A Y L
Sbjct: 773 LGIVYGAQGKREEAEAEYQV--AIRVAPRSDLAHYNLSLIYQEQGKFAAATAEYCTAVHL 830
Query: 166 FPD 168
PD
Sbjct: 831 NPD 833
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 55/141 (39%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
YA G ++A + + P + +N+L L G + A Y A L P D+
Sbjct: 506 YAQGKTDEAEAEFFAALAGDPGSAKVHNSLALVDERRGKMQEAAAEYRTAIRLDPSDAEP 565
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
L +G +AM + R AI P L L + + G + A E Y Q +
Sbjct: 566 HNNLGLLLKDEGRGDEAMEHFRTAIALAPTLGELHNSLGGLWEDRGRSDLAIEEYRQAIR 625
Query: 165 LFPDNVDATKTGAQLFLKCGQ 185
L P N A ++ K G+
Sbjct: 626 LQPRNAGAHNNLGNIWRKEGR 646
>gi|440748969|ref|ZP_20928219.1| hypothetical protein C943_0783 [Mariniradius saccharolyticus AK6]
gi|436482671|gb|ELP38769.1| hypothetical protein C943_0783 [Mariniradius saccharolyticus AK6]
Length = 476
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
LG A+ L N AF ++ +A + P+ W L ++K +A++Y R+A+
Sbjct: 277 LGAAYEKLENIDQAFKYFKKSAKIDPEYDDAWFGLGMCMLKKEKYFEAIHYFRKALNITK 336
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
++ + + LA ++G+ + ++E+YE+ L P ++ A ++ + ++ ++
Sbjct: 337 ENPNYWVGLADAEYQLGNLQASSEAYEEAINLEPGIMETYVNLAIIYFDQNRFEEAVDVM 396
Query: 194 EEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPL 244
+E ++ P +A+L +V L++ Y + ++E+A + F GK + L
Sbjct: 397 KEGIEELPGEAELYY--RMVVFLLKTAKYTEAFSYLENALTLDF-GKHVIL 444
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY--VIAAHLSPKDSALW 105
GN ++AI LL++ + L+ + E Y +LG + A N++ A F+ + ++ +D+
Sbjct: 115 GNNKEAIELLEDFLPLAEDKAEVYYSLGNLYKASENNEKAIHFFKECVKIRINHEDALF- 173
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
QL ++G + + + ++ I +P +L Y +G +E+A ++Y+
Sbjct: 174 -QLAMITEEEGSFNEILEFYQEFIDQDPYSAGAWYNLGVVYNRLGRFEEAIKAYD 227
>gi|410449277|ref|ZP_11303336.1| tetratricopeptide repeat protein [Leptospira sp. Fiocruz LV3954]
gi|418745196|ref|ZP_13301537.1| tetratricopeptide repeat protein [Leptospira santarosai str.
CBC379]
gi|418753445|ref|ZP_13309691.1| tetratricopeptide repeat protein [Leptospira santarosai str.
MOR084]
gi|409966199|gb|EKO34050.1| tetratricopeptide repeat protein [Leptospira santarosai str.
MOR084]
gi|410016936|gb|EKO79009.1| tetratricopeptide repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410793988|gb|EKR91902.1| tetratricopeptide repeat protein [Leptospira santarosai str.
CBC379]
Length = 1197
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYN-TLGLAHSALGNHKSAFDFYVIAAH-----LSPKD 101
G FEQ+ LK++ P N LG A L ++ A ++ A LS K
Sbjct: 172 GKFEQSYETLKKIPAKEFAFPAQLNMQLGDAAVQLKKYEEAEVYFEEARKNDPELLSAKK 231
Query: 102 SALWKQLLTFAVQKGDTA-------QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
SA ++ + A++ G+ A +A+ Y + AI+ +PK+ + I L + + GDYE
Sbjct: 232 SASITRVAS-ALENGNQAMRKKNYKEAVSYFQTAIQNDPKNPAPYIFLGNARILTGDYEA 290
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A +++E L PD +A A + K G +S+ +LE+ + + P++A
Sbjct: 291 ALKAFESSLSLKPDYQEAISGIAAVHYKTGNYRKSVSVLEKAISLFPNNA 340
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 137/365 (37%), Gaps = 81/365 (22%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G A++ Y GN+ +++S+L++ + L PN N +GL ALG A ++ A L
Sbjct: 311 GIAAVHYKTGNYRKSVSVLEKAISLFPNNAIYQNQMGLNMKALGEPAKALVYFTRARELD 370
Query: 99 P-----------------------------KDSALWKQLLTFA------------VQKGD 117
P K + KQ+++F +++GD
Sbjct: 371 PTFAEPVTNLVFLLIAENRYKTARKEAESLKSESEKKQIISFIDVSEQIYEGDKRLRQGD 430
Query: 118 TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGA 177
T A + +A +A ++ S+ Y GD + + E++++ + N+ A
Sbjct: 431 TKGAKVFYEKAKKASSEEPSVYNAFGRLYFISGDQKSSEENFKKALSVNKQNIPAL---- 486
Query: 178 QLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRF 237
Q ++ + ++ ++ +Y K +L+ D AI++ YE ++ + + R
Sbjct: 487 QGLIRLYSSQKNQNLMNQYTK---ELENLTGNDPSAAIVL-GRTYEDKKEYEKAENVYRN 542
Query: 238 SGKELPLKLKVKAGICYL----------------RLGNMEKAEILFAD----------LQ 271
K+ P V + L L + KAE L D +Q
Sbjct: 543 LQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNWISKAEKLTKDIPEIAETRKTIQ 602
Query: 272 WKNAIDHADLITEVADTLMSLGHSNSALKYYH--FLETNAGTDNGYLYLKLAECYLSLKE 329
I + A+ L A+ Y F +T T LY+K+AEC+L+L
Sbjct: 603 ENQKFATVIPIIQKANKLFDTRQYEKAIPLYQDAFQKTGKLT----LYIKIAECHLALGN 658
Query: 330 RAHAI 334
I
Sbjct: 659 EEKGI 663
>gi|395839356|ref|XP_003792558.1| PREDICTED: transmembrane and TPR repeat-containing protein 1,
partial [Otolemur garnettii]
Length = 836
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AISLLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 519 EEAISLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGV 578
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ A E Y++ ++
Sbjct: 579 FLVDSGFPEKAVTHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVARTAE 638
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I E + PS +L + + ++A++ + EK HI
Sbjct: 639 ILSPLGA-LYYNTGRHEEALQIYREAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 697
>gi|296481738|tpg|DAA23853.1| TPA: intraflagellar transport 88 homolog [Bos taurus]
Length = 825
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G++E+A KE +R + E +GL + L A D ++ + + +
Sbjct: 496 FANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 555
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D +QAM ++ Q I P D L Y GD +A + Y + +
Sbjct: 556 LYQIANVYELMEDPSQAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYR 615
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 616 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 639
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A ++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 640 AIQYFERASLI----QPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|242017488|ref|XP_002429220.1| tetratricopeptide repeat protein 10, tpr10, putative [Pediculus
humanus corporis]
gi|212514109|gb|EEB16482.1| tetratricopeptide repeat protein 10, tpr10, putative [Pediculus
humanus corporis]
Length = 845
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 64/124 (51%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ +QA +++ + P+ P LG G+ + AF ++ + P + +
Sbjct: 574 GDVDQATEWYLQLLGVVPSDPGILQELGQLFEREGDKQQAFQYHFDSYRYYPSNFDVLDW 633
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L ++ + G +A+ + ++A+ P + ++ LAS Y +IG+++KA E Y+ + K P
Sbjct: 634 LGSYYLSLGVPEKALPFFKRAVMIAPNEPKWQLLLASCYKKIGNHQKAVEVYKNLHKENP 693
Query: 168 DNVD 171
DN++
Sbjct: 694 DNIE 697
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
VTK LG+ + + G+F + ++L+ P Y L + + +G+ A ++Y+
Sbjct: 535 VTKQLGQYDI--SLGHFMKLDTILRHEA------PVLYQ-LAILNEFIGDVDQATEWYLQ 585
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
+ P D + ++L ++GD QA Y + R P + + L S+Y+ +G E
Sbjct: 586 LLGVVPSDPGILQELGQLFEREGDKQQAFQYHFDSYRYYPSNFDVLDWLGSYYLSLGVPE 645
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLV 213
KA +++ + P+ A + K G +++ + + K +P ++ + LLV
Sbjct: 646 KALPFFKRAVMIAPNEPKWQLLLASCYKKIGNHQKAVEVYKNLHKENPD--NIECLQLLV 703
Query: 214 AI-----LMENNAYEKTLQHIEHAQIVR 236
+ L E Y L+ E A+ VR
Sbjct: 704 RLTSEFGLKEAGEYALELKRAEKAKEVR 731
>gi|406870824|gb|EKD21860.1| hypothetical protein ACD_87C00299G0002, partial [uncultured
bacterium]
Length = 637
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
I ++P+D W L +A + + Y+++AI P D ++R LA+ Y+ G
Sbjct: 139 IRVQITPQD---W---LRYARSSRNQKVQIEYLKKAIAMNPGDSNVRRMLAALYLNAGMT 192
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLL 212
+A Y++I L PD+ + A+ +LK G+ I I +K +P D D ++ ++
Sbjct: 193 GEAIHQYQEILVLKPDDAEVMSELAKCYLKAGRYDDVIRISTRTIKTNPKD-DNAMTNMA 251
Query: 213 VAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA-EILFADLQ 271
+A N + K + A VR + KL G Y +LG + KA E L+
Sbjct: 252 LAWSRLGN-WNKAIAAYLDALKVRPDNPAVNFKL----GEAYEKLGQLGKAVEQYRLVLE 306
Query: 272 WKNAIDHADLITEVADTLMSLGHSNSALKYY 302
DH + +AD L+ +G+ + A++++
Sbjct: 307 KVPKADH--VAVALADILLKMGNFDEAIRWH 335
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GNF++AI KEVV+ P Y LGLA+ G K + Y A L P D ++
Sbjct: 326 GNFDEAIRWHKEVVKRQPKNAAAYANLGLAYGGKGLIKEEIENYKKAIELKPNDPVIYFN 385
Query: 108 LLTFAVQKGDTAQ-AMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
L T A +KG Q A+ ++ + +P D LA + Y +AA YE+I K
Sbjct: 386 LGT-AYEKGKRDQEAIRAYQKVVELKPDDPDAIERLADLRFKSKHYGEAAPLYEKIVKTS 444
Query: 167 P 167
P
Sbjct: 445 P 445
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 41 ASLQYAYGN---FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
A+L AYG ++ I K+ + L PN P Y LG A+ + A Y L
Sbjct: 350 ANLGLAYGGKGLIKEEIENYKKAIELKPNDPVIYFNLGTAYEKGKRDQEAIRAYQKVVEL 409
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
P D ++L + +A + ++ P+ ++ L Y E+ + ++ E
Sbjct: 410 KPDDPDAIERLADLRFKSKHYGEAAPLYEKIVKTSPRKAAIHGRLGFAYAELKKHAQSVE 469
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILM 217
+Y++ L + K AQ + + G+T +I + E+ P+ V+++L M
Sbjct: 470 NYQKAINLGAKDPQLHKNLAQAYSQMGKTKEAIPMYEKLASKKPT---AEVLNVLADAYM 526
Query: 218 ENNAYEKTL 226
+ Y+K +
Sbjct: 527 KEKLYDKAI 535
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 154/400 (38%), Gaps = 46/400 (11%)
Query: 43 LQYAYGNFEQAISL--LKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
L+YA + Q + + LK+ + ++P L + G A Y L P
Sbjct: 149 LRYARSSRNQKVQIEYLKKAIAMNPGDSNVRRMLAALYLNAGMTGEAIHQYQEILVLKPD 208
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
D+ + +L ++ G + + I+ PKD + ++A + +G++ KA +Y
Sbjct: 209 DAEVMSELAKCYLKAGRYDDVIRISTRTIKTNPKDDNAMTNMALAWSRLGNWNKAIAAYL 268
Query: 161 QIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
K+ PDN + + K GQ +++ L+ P ++V L IL++
Sbjct: 269 DALKVRPDNPAVNFKLGEAYEKLGQLGKAVEQYRLVLEKVPKADHVAVA--LADILLKMG 326
Query: 221 AYEKTLQHIEHAQIVR---------------FSGKEL----------PLKLKVKAGICYL 255
+++ ++ H ++V+ + GK L ++LK + Y
Sbjct: 327 NFDEAIRW--HKEVVKRQPKNAAAYANLGLAYGGKGLIKEEIENYKKAIELKPNDPVIYF 384
Query: 256 RLGNM-EKAEILFADLQWKNAI-----DHADLITEVADTLMSLGHSNSALKYYHFLETNA 309
LG EK + ++ + D D I +AD H A Y +
Sbjct: 385 NLGTAYEKGKRDQEAIRAYQKVVELKPDDPDAIERLADLRFKSKHYGEAAPLYEKI-VKT 443
Query: 310 GTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI- 368
++ +L Y LK+ A ++ + KA++ + LA + K +EAI
Sbjct: 444 SPRKAAIHGRLGFAYAELKKHAQSVENYQKAINLGAKDPQLHKNLAQAYSQMGKTKEAIP 503
Query: 369 ---TLLSPPKDLDSLDMNSDKSNPWWLNEKIIMKLCHIYR 405
L S + L++ +D ++ EK+ K IY+
Sbjct: 504 MYEKLASKKPTAEVLNVLADA----YMKEKLYDKAIMIYK 539
>gi|193784770|dbj|BAG53923.1| unnamed protein product [Homo sapiens]
Length = 531
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 214 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGV 273
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ A E Y++ ++
Sbjct: 274 FLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE 333
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I +E + PS +L + + ++A++ + EK HI
Sbjct: 334 ILSPLGA-LYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 392
>gi|422003049|ref|ZP_16350282.1| TPR repeat-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417258270|gb|EKT87662.1| TPR repeat-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
gi|456875527|gb|EMF90728.1| tetratricopeptide repeat protein [Leptospira santarosai str. ST188]
Length = 1197
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYN-TLGLAHSALGNHKSAFDFYVIAAH-----LSPKD 101
G FEQ+ LK++ P N LG A L ++ A ++ A LS K
Sbjct: 172 GKFEQSYETLKKIPAKEFAFPAQLNMQLGDAAVQLKKYEEAEVYFEEARKNDPELLSAKK 231
Query: 102 SALWKQLLTFAVQKGDTA-------QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
SA ++ + A++ G+ A +A+ Y + AI+ +PK+ + I L + + GDYE
Sbjct: 232 SASITRVAS-ALENGNQAMRKKNYKEAVSYFQTAIQNDPKNPAPYIFLGNARILTGDYEA 290
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
A +++E L PD +A A + K G +S+ +LE+ + + P++A
Sbjct: 291 ALKAFESSLSLKPDYQEAISGIAAVHYKTGNYRKSVSVLEKAISLFPNNA 340
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 41/183 (22%)
Query: 39 GEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLS 98
G A++ Y GN+ +++S+L++ + L PN N +GL ALG A ++ A L
Sbjct: 311 GIAAVHYKTGNYRKSVSVLEKAISLFPNNAIYQNQMGLNMKALGEPAKALVYFTRARELD 370
Query: 99 P-----------------------------KDSALWKQLLTFA------------VQKGD 117
P K + KQ+++F +++GD
Sbjct: 371 PTFAEPVTNLVFLLIAENRYKTARKEAESLKSESEKKQIISFIDVSEQIYEGDKRLRQGD 430
Query: 118 TAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGA 177
T A + +A +A + S+ Y GD + + E++++ + N+ A +
Sbjct: 431 TKGAKVFYEKAKKASSDEPSVYNAFGRLYFISGDQKSSEENFKKALSVNKQNIPALQGLI 490
Query: 178 QLF 180
+L+
Sbjct: 491 RLY 493
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 18/248 (7%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
V++ + E + G+ + A ++ + S + P YN G + G+ KS+ + +
Sbjct: 415 VSEQIYEGDKRLRQGDTKGAKVFYEKAKKASSDEPSVYNAFGRLYFISGDQKSSEENFKK 474
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A ++ ++ + L+ + + Y ++ D S I L Y + +YE
Sbjct: 475 ALSVNKQNIPALQGLIRLYSSQKNQNLMNQYTKELENLTGNDPSAAIVLGRTYEDKKEYE 534
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKCG----QTARSIGILEEYLKVHPSDADLSVI 209
KA Y+ +QK FP+N A L+ K + L K D+ I
Sbjct: 535 KAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNWISKAEKLTKDIPEI 594
Query: 210 DLLVAILMENNAYEKTLQHIEHAQIV---RFSGKELP-----------LKLKVKAGICYL 255
+ EN + + I+ A + R K +P L L +K C+L
Sbjct: 595 AETRKTIQENQKFATVIPIIQKANKLFDTRQYEKAIPLYQDAFQKTGKLTLYIKIAECHL 654
Query: 256 RLGNMEKA 263
LGN EK
Sbjct: 655 ALGNEEKG 662
>gi|295677297|ref|YP_003605821.1| hypothetical protein BC1002_2251 [Burkholderia sp. CCGE1002]
gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
Length = 628
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 46 AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALW 105
A G QA++ + +RL PNLP +G A +ALG + A + A L P+ + W
Sbjct: 230 ATGRHAQAVASFEAALRLQPNLPPAIYGMGNALAALGRAEQALPYLERAVGLDPQFALAW 289
Query: 106 KQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
L T G A A+ + QA+R P S ++ A ++ + D+E+ YE
Sbjct: 290 LALGTAHQALGAHAAAVRALDQALRLRPDLASAHMNRALAWLAMRDFERGLPEYE 344
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 27 KNKLSPGVTKMLGEASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ T + +L AY G E A + +RL P ++N LG A ALG
Sbjct: 106 RNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFERSLRLQPEDASSHNNLGNALHALGR 165
Query: 84 HKSAFDFYVIAAHLSPKDS-ALWKQLLTF-AVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
H A + A L P + AL ++ A+ + D +A+ A+ EP+ ++ +
Sbjct: 166 HAEAIASFRRALELRPGHAGALNNMGMSLNALDRPD--EAVPCFEAALAVEPRFVAAHFN 223
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
LA+ + G + +A S+E +L P+ A G+ +++ LE + + P
Sbjct: 224 LANTFDATGRHAQAVASFEAALRLQPNLPPAIYGMGNALAALGRAEQALPYLERAVGLDP 283
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 24/286 (8%)
Query: 64 SPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMY 123
+P+ + + LG+ G H A A L P+D+AL L G A+
Sbjct: 44 NPSHVDALHLLGVLRHQQGQHAEAAALVRRAVDLRPEDAALQLNLGNALKALGQIDAAIE 103
Query: 124 YIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
R A+ P +L + Y +G +E AA+++E+ +L P++ +
Sbjct: 104 QFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFERSLRLQPEDASSHNNLGNALHAL 163
Query: 184 GQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHI---EHAQIV--RFS 238
G+ A +I L++ P A L + M NA ++ + + E A V RF
Sbjct: 164 GRHAEAIASFRRALELRPGHA-----GALNNMGMSLNALDRPDEAVPCFEAALAVEPRFV 218
Query: 239 GKELPLKLKVKA-GICYLRLGNMEKAEILFADLQWKNAIDHADLITEVADTLMSLGHSNS 297
L A G + + E A L +L I + + L +LG +
Sbjct: 219 AAHFNLANTFDATGRHAQAVASFEAALRLQPNLP--------PAIYGMGNALAALGRAEQ 270
Query: 298 ALKYYHFLETNAGTDNGY--LYLKLAECYLSLKERAHAIMFFYKAL 341
AL Y LE G D + +L L + +L A A+ +AL
Sbjct: 271 ALPY---LERAVGLDPQFALAWLALGTAHQALGAHAAAVRALDQAL 313
>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 1179
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 29 KLSPGVTKMLGEASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+++P K+ G L G +E AI+ + + ++PN + + GLA + LG ++ A
Sbjct: 170 EINPDDYKIWGNRGLALNNLGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGKYEDA 229
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDT-AQAMYYIRQAIRAEPKDISLRIHLASFY 146
Y A ++P + W L +FA+ K + + + + QA++ + A
Sbjct: 230 IASYDKAIEINPGEYGSWI-LRSFALDKLEKYEEVVTSLDQALKINSHEYYAWNRRAIGL 288
Query: 147 VEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
++G +E+A SY++ K+ PD+ A + + K G+ +I L++ LK++P
Sbjct: 289 DKLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSLDQALKINP 343
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 8/215 (3%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
+E+ ++ L + ++++ + +N + LG H+ A Y A ++P D W+
Sbjct: 260 YEEVVTSLDQALKINSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAWRNK- 318
Query: 110 TFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
F + K G +A+ + QA++ P I ++G Y +A SY Q ++ PD
Sbjct: 319 GFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAIQINPD 378
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQH 228
+ A K G+ + ++ + L+++ SD + S +L L YE+ +
Sbjct: 379 DYTAWINRGSALDKLGKYSEALASYNQALEIN-SD-EYSAWNLRGKTLNNLGKYEEAITS 436
Query: 229 IEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
+ +++ + + V G+ LG EKA
Sbjct: 437 FD--KVIEINSDD--YTAWVNRGLALNELGKYEKA 467
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 64/154 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +E+AI+ +V+ ++ + + GLA + LG ++ A Y A ++P + W
Sbjct: 428 GKYEEAITSFDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNN 487
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
G +A+ +A+ P ++ + + +G Y + S +Q ++ P
Sbjct: 488 QGNALFNLGKYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINP 547
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
D A GQ ++ + ++++P
Sbjct: 548 DYYMAWSNRGFGLYNLGQYEEALASCNKAIEINP 581
>gi|301336134|ref|NP_001180380.1| transmembrane and TPR repeat-containing protein 1 isoform 1 [Homo
sapiens]
gi|347595775|sp|Q8IUR5.3|TMTC1_HUMAN RecName: Full=Transmembrane and TPR repeat-containing protein 1
Length = 882
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 565 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGV 624
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ A E Y++ ++
Sbjct: 625 FLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE 684
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I +E + PS +L + + ++A++ + EK HI
Sbjct: 685 ILSPLGA-LYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 743
>gi|443476266|ref|ZP_21066181.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443018804|gb|ELS32997.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 367
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 14/248 (5%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
N+ AI+ L++ +L + +N LG + + ++ +A Y A +L ++ + +
Sbjct: 90 NYSAAITALEKATKLDATNAKAFNALGFVYVRIKDYPNALTAYRRAINLDRQNIDAYNSV 149
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPD 168
++ + +A+ RQAI A P + ++L GD + A + Y Q K+ P
Sbjct: 150 GFLLTEQKNYPEAIKIYRQAIAAVPNEAKSYLNLGYVLQLKGDRKGAFDIYNQADKIAPF 209
Query: 169 NVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS--DADLSVIDLLVAILMENNAYEKTL 226
N D LF QT +I + L+++P A+L++ + Y + +
Sbjct: 210 NADVLVAIGGLFADQNQTEEAIAKYKRALEINPRHFSANLAI----SRVFQSQGNYVEAI 265
Query: 227 QHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEVA 286
+ A + ++L+ Y++ G++ A + + + D+ TE A
Sbjct: 266 TALRTAAAAKNISSSNAIELQKGIAALYIQQGSLSGAIVAYRQI--------LDIDTEDA 317
Query: 287 DTLMSLGH 294
T ++LG
Sbjct: 318 PTYLALGQ 325
>gi|440911858|gb|ELR61486.1| Intraflagellar transport protein 88-like protein, partial [Bos
grunniens mutus]
Length = 827
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 573 QAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 632
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 633 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 692
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 693 CLRFLVRLCTDIG 705
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G++E+A KE +R + E +GL + L A D ++ + + +
Sbjct: 498 FANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 557
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D +QAM ++ Q I P D L Y GD +A + Y + +
Sbjct: 558 LYQIANVYELMEDPSQAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYR 617
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 618 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 641
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A ++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 642 AIQYFERASLI----QPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRK 686
>gi|22299903|ref|NP_683150.1| hypothetical protein tlr2360 [Thermosynechococcus elongatus BP-1]
gi|22296088|dbj|BAC09912.1| tlr2360 [Thermosynechococcus elongatus BP-1]
Length = 350
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP V++++ E GN+ QA+++ ++++ P ++ +G ++ G A
Sbjct: 26 SP-VSRLMQEGQRLVEGGNYAQALAIYQQLLESESRNPRVHSAIGYIYAQQGQFGEAARA 84
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
Y A L +++ + L G+ A RQAIR ++ LA +G
Sbjct: 85 YQRAIELDQQNADFYYALGYSLGMMGENQGAAAAYRQAIRLNHRNAQAYEGLAVILARLG 144
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVID 210
D + A E+Y +L P N A K L L+ G ++ L++ + P A + I+
Sbjct: 145 DPQGAIEAYRSALRLAPGNWAAQKGLGVLLLQQGNIPEALSRLQQAAALAPGSASIQ-IN 203
Query: 211 LLVAIL 216
L +A+L
Sbjct: 204 LGMALL 209
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G + A + ++ +RL+ + Y L + + LG+ + A + Y A L+P + A K
Sbjct: 110 GENQGAAAAYRQAIRLNHRNAQAYEGLAVILARLGDPQGAIEAYRSALRLAPGNWAAQKG 169
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L +Q+G+ +A+ ++QA P S++I+L + GD ++ ++ L
Sbjct: 170 LGVLLLQQGNIPEALSRLQQAAALAPGSASIQINLGMALLAAGDPSNGWQAIDRAAHLGQ 229
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENN 220
+ D + A+L Q R+I + + P ++ L +LM+ N
Sbjct: 230 RDADLLQQVAELAAAANQPERAIQAYRRLITLQPE--RVATYFSLGELLMQQN 280
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Query: 29 KLSPG---VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
+L+PG K LG LQ GN +A+S L++ L+P LG+A A G+
Sbjct: 158 RLAPGNWAAQKGLGVLLLQQ--GNIPEALSRLQQAAALAPGSASIQINLGMALLAAGDPS 215
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
+ + AAHL +D+ L +Q+ A +A+ R+ I +P+ ++ L
Sbjct: 216 NGWQAIDRAAHLGQRDADLLQQVAELAAAANQPERAIQAYRRLITLQPERVATYFSLGEL 275
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDA 172
++ +AA Y Q ++ P + +
Sbjct: 276 LMQQNHPLEAAAIYRQATQINPQDPEG 302
>gi|116621110|ref|YP_823266.1| hypothetical protein Acid_1991 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224272|gb|ABJ82981.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 399
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
Q+I L+ L PN E LG A +A +A + A L+PK S W QL
Sbjct: 101 QSIPHLQSAAALEPNNFEYRFYLGQALNATSQFSAALPQFTAATALNPKSSEAWNQLGLS 160
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ GDTA A+ R+A+ P ++ R +L V G ++ +E+I P N
Sbjct: 161 RQRTGDTAGAINAYRRAVTLSPANLDARNNLGFVLVNSGRADEGLAQFEKILAADPANNM 220
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI 215
A +L+ R+ E ++ P A ++ DL +A+
Sbjct: 221 ARVNAGFAYLQKADLDRAAVEFREVIRRDPESA-IAHYDLGIAL 263
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 11/254 (4%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P + + +A+ + G+ A++L + L+P + +G + L + A +
Sbjct: 13 PQLRDLESQAAAARSRGDAPGALALWERAAALAPQSAHVQDEIGFLLAVLNRQEEALRHF 72
Query: 92 VIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGD 151
A L PK + L D AQ++ +++ A EP + R +L
Sbjct: 73 EQAIALDPKFAPAQYHLGVARWLANDPAQSIPHLQSAAALEPNNFEYRFYLGQALNATSQ 132
Query: 152 YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK-VHPSDADLSVID 210
+ A + L P + +A QL L +T + G + Y + V S A+L +
Sbjct: 133 FSAALPQFTAATALNPKSSEAWN---QLGLSRQRTGDTAGAINAYRRAVTLSPANLDARN 189
Query: 211 LLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADL 270
L +L+ + ++ L E + +V AG YL+ ++++A + F ++
Sbjct: 190 NLGFVLVNSGRADEGLAQFEKI----LAADPANNMARVNAGFAYLQKADLDRAAVEFREV 245
Query: 271 QWKN---AIDHADL 281
++ AI H DL
Sbjct: 246 IRRDPESAIAHYDL 259
>gi|440789755|gb|ELR11054.1| tetratricopeptide repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1211
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 123 YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLK 182
YY QA P+ L Y+ G+ KA S+E + K +PDN + K A L+
Sbjct: 369 YY--QATDMWPEYTLAHYGLGQMYLAKGETAKAIASFEVVNKKYPDNYETLKILASLYAH 426
Query: 183 CGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA-QIVRFSGKE 241
G+ ++I + HP D + V L ++ Y + L+ E A +++ G+
Sbjct: 427 TGKRDKAIHHFRRITETHPKDTEAWV--ELGDLVERQKNYTEALKAYEKATTLLQAQGEP 484
Query: 242 LPLKLKVKAGICYLRLGNMEKAE 264
+P++L G+ +LGN+E AE
Sbjct: 485 VPIELWNNVGVLRHQLGNVEGAE 507
>gi|428315210|ref|YP_007113092.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428238890|gb|AFZ04676.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 1363
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G EQA + + +PNLPE Y LG+ +S + A A L+P +A ++Q
Sbjct: 59 GEIEQAKQWYEAAIDRNPNLPEVYANLGILYSQGKQWEKAIAHCEKAISLAPHFAAAYRQ 118
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH--LASFYVEIGDYEKAAESYEQIQKL 165
L Q +A + QA EP + H L + +VE+G ++A E Y + KL
Sbjct: 119 LARVWTQLEKREEAADFWYQAFNIEPNWATAEEHVTLGNSFVELGKCDRAMECYSRAIKL 178
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
P A ++ ++ + +I + + ++P+
Sbjct: 179 NPQLATAYHNLGEMLVREKRWDEAIANYRQAIAINPN 215
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
S K+ + +A + A G +A++ + +++ PNL TLG G +
Sbjct: 3 SIEKMEKAAVDLSRQAEVYLAEGKLNEAVAACESALKIEPNLGAACQTLGKVMQVRGEIE 62
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A +Y A +P ++ L Q +A+ + +AI P + LA
Sbjct: 63 QAKQWYEAAIDRNPNLPEVYANLGILYSQGKQWEKAIAHCEKAISLAPHFAAAYRQLARV 122
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATK--TGAQLFLKCGQTARSIGILEEYLKVHP 201
+ ++ E+AA+ + Q + P+ A + T F++ G+ R++ +K++P
Sbjct: 123 WTQLEKREEAADFWYQAFNIEPNWATAEEHVTLGNSFVELGKCDRAMECYSRAIKLNP 180
>gi|426236519|ref|XP_004012215.1| PREDICTED: intraflagellar transport protein 88 homolog [Ovis aries]
Length = 825
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G++E+A KE +R + E +GL + L A D ++ + + +
Sbjct: 496 FANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 555
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D +QAM ++ Q I P D L Y GD +A + Y + +
Sbjct: 556 LYQIANVYELMEDPSQAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYR 615
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 616 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 639
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A ++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 640 AIQYFERASLI----QPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|376260962|ref|YP_005147682.1| Tfp pilus assembly protein PilF [Clostridium sp. BNL1100]
gi|373944956|gb|AEY65877.1| Tfp pilus assembly protein PilF [Clostridium sp. BNL1100]
Length = 587
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 142/347 (40%), Gaps = 24/347 (6%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPE---TYNTLGLAHSALGNHKSA 87
+PG ++ + G F +A+S ++V+ L+ + Y LG+ + + + A
Sbjct: 185 TPG-NLFFNYGNVYFKKGMFREAVSCYRKVLELNEQFEKKYLIYVNLGITYFNMEKTELA 243
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ + A ++P+ + + G A A+ Y ++ + + L + L V
Sbjct: 244 LENFFKALEINPECPTAKEGIGRIYTTTGRQADAVMYYEDLLKNDDSNYELSLSLGKLLV 303
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
E+G+ ++A +E K P DA +LF+ GQ + +I + + Y+ ++ D D
Sbjct: 304 ELGNIDEAKVRFETCIKNNPQQADAYILLGKLFMTVGQYSEAIKVFKTYITIN--DVDYI 361
Query: 208 VIDLLVAILMEN----NAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKA 263
L +N NA + +Q I H Q E KL G+ Y + +EKA
Sbjct: 362 GHYNLAECYFQNKEYKNAIAEYMQTISHNQ----KSHESLYKL----GLIYDEIDEIEKA 413
Query: 264 -EILFADLQWKNAIDHADLITEVADTLM-SLGHSNSALKYYHFLETNAGTDNGYLYLKLA 321
+ A +Q K+ D D + S H S Y ++ N DN LY +
Sbjct: 414 IDCYRAAIQLKS--DFIDAYNNLGIVFAKSQRHVESLAAYTAGIKLNP--DNFRLYFNMG 469
Query: 322 ECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAI 368
LK + F +A++ ++ D L + L E + +EAI
Sbjct: 470 VVLFELKRYEDSADAFVRAVELNPEDKDVYYYLGASLTELKQYDEAI 516
>gi|160707933|ref|NP_001104256.1| intraflagellar transport protein 88 homolog [Bos taurus]
Length = 825
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%)
Query: 52 QAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTF 111
QA+ L +++ + P + LG + + G+ AF +Y + P + + + L +
Sbjct: 571 QAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAY 630
Query: 112 AVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
+ +A+ Y +A +P + ++ +AS + G+Y+KA ++Y+ I + FP+NV+
Sbjct: 631 YIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVE 690
Query: 172 ATKTGAQLFLKCG 184
+ +L G
Sbjct: 691 CLRFLVRLCTDIG 703
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 45 YAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSAL 104
+A G++E+A KE +R + E +GL + L A D ++ + + +
Sbjct: 496 FANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQV 555
Query: 105 WKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQK 164
Q+ D +QAM ++ Q I P D L Y GD +A + Y + +
Sbjct: 556 LYQIANVYELMEDPSQAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYR 615
Query: 165 LFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEK 224
FP N++ VI+ L A ++ EK
Sbjct: 616 YFPSNIE------------------------------------VIEWLGAYYIDTQFCEK 639
Query: 225 TLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWK 273
+Q+ E A ++ + +K ++ C+ R GN +KA + D+ K
Sbjct: 640 AIQYFERASLI----QPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRK 684
>gi|118400791|ref|XP_001032717.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287061|gb|EAR85054.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 721
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%)
Query: 50 FEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLL 109
F+ +IS + +RL P+ PETY GL+ L K A + ++ L K +++ +
Sbjct: 434 FQLSISDFNQAIRLEPSYPETYYFRGLSLIELKKVKQALSDFTLSLQLGIKSPSIFSGMA 493
Query: 110 TFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
Q + +A++YI QA+ ++ + ++ YV+I +Y+KA +
Sbjct: 494 QAYRQLENYDKALFYINQALEKSSLNVDFLLQRSNIYVDIKEYQKAID 541
>gi|76811375|ref|YP_334393.1| hypothetical protein BURPS1710b_3015 [Burkholderia pseudomallei
1710b]
gi|76580828|gb|ABA50303.1| TPR domain protein [Burkholderia pseudomallei 1710b]
Length = 626
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 105 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 164
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 165 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 224
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 225 NALDAIGQHAQAQHAFEAALALQP 248
>gi|303236399|ref|ZP_07322988.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
gi|302483371|gb|EFL46377.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
Length = 549
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 152/353 (43%), Gaps = 21/353 (5%)
Query: 40 EASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSP 99
EA Q GN A LL L+PN PE Y L + + N K A + AA L+P
Sbjct: 16 EAIRQQEMGNLSAAFDLLNHARELNPNAPEVYFELAGYYVDIQNTKEARYCFEKAAELAP 75
Query: 100 KDSALWKQLLTFAVQKGDTAQAM-YYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAES 158
+++ +++ F + + D +A+ Y R + ++ L+I L Y +Y+K +
Sbjct: 76 ENATYLEKMGQFYISQTDYLKAIEAYERLYSSNKTREDVLQI-LFQLYGSQNNYKKTLDV 134
Query: 159 YEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILME 218
++++ L N + T Q++ + G ++ L ++ HP D + + +L L +
Sbjct: 135 LQRMELLLGSNEQLSLTKMQIYEQMGNKKKAQEELINLVRKHPLDLNYRI--MLGNWLFQ 192
Query: 219 NNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGIC-YLRLGNMEK-----AEILFADLQW 272
NN ++ + E+ ++ KE P + Y R EK E L + +
Sbjct: 193 NNKKKEAFK--EYQTVL----KEEPDNAYAHLSLLDYYRDAKNEKMVETLTEKLLSSKKT 246
Query: 273 KNAIDHADLITEVADTLMS-LGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERA 331
+ A L +AD S S L+ + + + TD + +K A YLSLK+
Sbjct: 247 EKETKMALLRQVIADNEQSETKDSTEVLQLFDHVLSYPQTDADIMMMKAA--YLSLKQAP 304
Query: 332 HAIM--FFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLDSLDM 382
+ + KA+ DN AR+ L L E+ + + I + P ++ + +M
Sbjct: 305 KDSINKVYEKAIAIEPDNSRARIALIQNLWEKEEYNKVIEIAKPAQEYNPTEM 357
>gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 260
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 2/176 (1%)
Query: 32 PGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFY 91
P V ++ A ++ G+++ AI+ L + ++LSPN E+Y+ A+ L N++ A Y
Sbjct: 37 PTVQNLINSARIKAEKGDYQGAIADLTQALQLSPNNAESYHRRANAYYQLENYQGAIADY 96
Query: 92 VIAAHLSPKD-SALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
A L+P D A + + +T + GD A+ QAI+ P + + +G
Sbjct: 97 NQAIQLNPDDVKAYYNRGITHS-HLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLG 155
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
D + A Y Q KL PD A G +I + ++ +P +A++
Sbjct: 156 DDQGAIADYNQAIKLNPDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANV 211
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+++ AI+ + ++L+P+ Y GLA LG+ + A Y A L+P + +
Sbjct: 121 GDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAIKLNPDYAIAYNN 180
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLF 166
GD A+ QAI+ P + ++ + Y+ +GD KA E + Q LF
Sbjct: 181 RGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKALEDFRQAATLF 239
>gi|218248948|ref|YP_002374319.1| hypothetical protein PCC8801_4239 [Cyanothece sp. PCC 8801]
gi|218169426|gb|ACK68163.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
Length = 363
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 36/199 (18%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GNF QA+ ++ V L PN + Y LG + + +G++++A Y A L+P+
Sbjct: 90 GNFRQAVKAYQQAVTLDPNNADFYYALGFSLANIGDNENAASAYYYAIQLAPR------- 142
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
V K + +RQ DY+ AAE+Y+++ L P
Sbjct: 143 -----VTKNYIGLGVVLLRQ----------------------NDYQGAAEAYKRVIALDP 175
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
+N +A ++ + ++I L +K P+D +L + LL +E + E
Sbjct: 176 NNSEAFAIMGSSLIQQKELDKAIQYLNNAVKRFPNDLELRL--LLATAFLEQDNNELAFN 233
Query: 228 HIEHAQIVRFSGKELPLKL 246
++ A+ + ++ LK+
Sbjct: 234 QLKSAERISPGNPKVQLKI 252
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 8/191 (4%)
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEP 133
LG + L ++ SA Y AA L ++ ++ + QKG+ QA+ +QA+ +P
Sbjct: 48 LGREYVDLKDYNSAIVTYEKAAILDGNNAKIFSGIGYLYAQKGNFRQAVKAYQQAVTLDP 107
Query: 134 KDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGIL 193
+ L IGD E AA +Y +L P TK L + + G
Sbjct: 108 NNADFYYALGFSLANIGDNENAASAYYYAIQLAP---RVTKNYIGLGVVLLRQNDYQGAA 164
Query: 194 EEYLKVHPSDADLS-VIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGI 252
E Y +V D + S ++ + L++ +K +Q++ +A + RF L+L++
Sbjct: 165 EAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNA-VKRFPND---LELRLLLAT 220
Query: 253 CYLRLGNMEKA 263
+L N E A
Sbjct: 221 AFLEQDNNELA 231
>gi|167895374|ref|ZP_02482776.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 7894]
Length = 614
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|167829957|ref|ZP_02461428.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 9]
gi|226197877|ref|ZP_03793451.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
Pakistan 9]
gi|225930065|gb|EEH26078.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
Pakistan 9]
Length = 614
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|390441840|ref|ZP_10229871.1| Putative sulfotransferase [Microcystis sp. T1-4]
gi|389834894|emb|CCI33997.1| Putative sulfotransferase [Microcystis sp. T1-4]
Length = 740
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 130/326 (39%), Gaps = 20/326 (6%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G EQA+ LL+ V+L+P+ P LG A+ + A A L P
Sbjct: 57 GEKEQAVRLLQRAVKLNPSEPIYQCNLGAAYRQSHRYNEAISACQKALKLRPNYPNALTT 116
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + +A+ QAI P+ L + A E+G A E+YEQ L P
Sbjct: 117 LASTYFASEQYQEALTTYEQAIAIAPEQALLHAYRADALRELGRVRAAIEAYEQALHLSP 176
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
D A L GQ R+ LE + S+A S + + + +TL
Sbjct: 177 DLPHAMGNFGLTLLAVGQPERA---LEYCRRATESEAKNSQAWMNLGTVF------RTLG 227
Query: 228 HIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKN---AIDHADLITE 284
+E A + GK L A +C L ++ L L W + AI+ L +
Sbjct: 228 QLEAA--MDAYGKAYDLNPD-SAMLCTLIGQIWQEVSELPQALTWYDKALAIEPERLDSR 284
Query: 285 V--ADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKAL 341
A+ ++ LG S +A+ +Y +E + +D G Y L++ + A+ Y+A+
Sbjct: 285 CAFAEAILDLGDSATAITRYQEIIEQH--SDYGEAYSGLSQALWEDGDAEEAVAMAYRAV 342
Query: 342 DRFEDNIDARLTLASLLLEEAKEEEA 367
+ +N R LAS+L E A
Sbjct: 343 ELKPENASLRAHLASILASAGDVESA 368
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Query: 30 LSPGVTKMLGEASLQY-AYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAF 88
LSP + +G L A G E+A+ + + + LG LG ++A
Sbjct: 174 LSPDLPHAMGNFGLTLLAVGQPERALEYCRRATESEAKNSQAWMNLGTVFRTLGQLEAAM 233
Query: 89 DFYVIAAHLSPKDSALWKQLLTFAVQK-GDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
D Y A L+P DSA+ L+ Q+ + QA+ + +A+ EP+ + R A +
Sbjct: 234 DAYGKAYDLNP-DSAMLCTLIGQIWQEVSELPQALTWYDKALAIEPERLDSRCAFAEAIL 292
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL 206
++GD A Y++I + D +A +Q + G ++ + +++ P +A L
Sbjct: 293 DLGDSATAITRYQEIIEQHSDYGEAYSGLSQALWEDGDAEEAVAMAYRAVELKPENASL 351
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 111/264 (42%), Gaps = 18/264 (6%)
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
A+ +G+ QA+ +++A++ P + + +L + Y + Y +A + ++ KL P+
Sbjct: 52 IALNQGEKEQAVRLLQRAVKLNPSEPIYQCNLGAAYRQSHRYNEAISACQKALKLRPNYP 111
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADL-----SVIDLLVAILMENNAYEKT 225
+A T A + Q ++ E+ + + P A L + L + AYE+
Sbjct: 112 NALTTLASTYFASEQYQEALTTYEQAIAIAPEQALLHAYRADALRELGRVRAAIEAYEQA 171
Query: 226 LQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILFADLQWKNAIDHADLITEV 285
L H+ +LP + G+ L +G E+A + + ++ ++ +
Sbjct: 172 L-HL---------SPDLPHAMG-NFGLTLLAVGQPERA-LEYCRRATESEAKNSQAWMNL 219
Query: 286 ADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKALDRFE 345
+LG +A+ Y + D+ L + + + + E A+ ++ KAL
Sbjct: 220 GTVFRTLGQLEAAMDAYG-KAYDLNPDSAMLCTLIGQIWQEVSELPQALTWYDKALAIEP 278
Query: 346 DNIDARLTLASLLLEEAKEEEAIT 369
+ +D+R A +L+ AIT
Sbjct: 279 ERLDSRCAFAEAILDLGDSATAIT 302
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 136/347 (39%), Gaps = 14/347 (4%)
Query: 26 SKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHK 85
SK+ + G+T G L+ G ++A ++ +++ +PN N GL G +
Sbjct: 3 SKSTKTTGITIETGFDRLRT--GRLQEAAAIADQLLSSNPNHHGALNLSGLIALNQGEKE 60
Query: 86 SAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASF 145
A A L+P + L Q +A+ ++A++ P + LAS
Sbjct: 61 QAVRLLQRAVKLNPSEPIYQCNLGAAYRQSHRYNEAISACQKALKLRPNYPNALTTLAST 120
Query: 146 YVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD 205
Y Y++A +YEQ + P+ A + G+ +I E+ L + P D
Sbjct: 121 YFASEQYQEALTTYEQAIAIAPEQALLHAYRADALRELGRVRAAIEAYEQALHLSP-DLP 179
Query: 206 LSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEI 265
++ + + +L E+ L++ A + + L G + LG +E A
Sbjct: 180 HAMGNFGLTLLAVGQP-ERALEYCRRATESEAKNSQAWMNL----GTVFRTLGQLEAAMD 234
Query: 266 LFADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGTDNGYLYLK--LAEC 323
+ N D A L T + + AL +Y + + L + AE
Sbjct: 235 AYGKAYDLNP-DSAMLCTLIGQIWQEVSELPQALTWY---DKALAIEPERLDSRCAFAEA 290
Query: 324 YLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITL 370
L L + A AI + + +++ D +A L+ L E+ EEA+ +
Sbjct: 291 ILDLGDSATAITRYQEIIEQHSDYGEAYSGLSQALWEDGDAEEAVAM 337
>gi|254195664|ref|ZP_04902091.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|418380278|ref|ZP_12966262.1| TPR domain-containing protein [Burkholderia pseudomallei 354a]
gi|418557446|ref|ZP_13122041.1| TPR domain-containing protein [Burkholderia pseudomallei 354e]
gi|169652410|gb|EDS85103.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|385365088|gb|EIF70785.1| TPR domain-containing protein [Burkholderia pseudomallei 354e]
gi|385377517|gb|EIF82088.1| TPR domain-containing protein [Burkholderia pseudomallei 354a]
Length = 614
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|237813335|ref|YP_002897786.1| hypothetical protein GBP346_A3104 [Burkholderia pseudomallei
MSHR346]
gi|237504254|gb|ACQ96572.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
MSHR346]
Length = 614
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|167919999|ref|ZP_02507090.1| tetratricopeptide repeat protein [Burkholderia pseudomallei BCC215]
Length = 614
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|33865807|ref|NP_897366.1| TPR domain containing protein [Synechococcus sp. WH 8102]
gi|33632977|emb|CAE07788.1| possible-TPR Domain containing protein [Synechococcus sp. WH 8102]
Length = 781
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 31 SPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDF 90
SP + LG ++ G E+AI+ K +++ + ++ LG + LG + A D
Sbjct: 56 SPIIFSNLG--AICQTNGRTEEAIAFYKNAIKIDQRHHDAFSNLGALYKDLGQYNQALDA 113
Query: 91 YVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIG 150
V + L P + L + G QA+ ++I P I+L S Y+E+G
Sbjct: 114 TVKSLKLKPDNPIALLNLGSIYKDLGKLDQALTATVKSIEQNPNSADSFINLGSIYIELG 173
Query: 151 DYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDAD--LSV 208
+ ++A S + +L P N A ++ G +++ + L++ P + D +++
Sbjct: 174 NLDQALASTLKSLELNPGNPIALMNLGSIYRDLGNLDQALASTLKSLEMKPKNPDALMNL 233
Query: 209 IDLLVAILMENNAYEKTLQHIEH 231
+ + N A TL+ +EH
Sbjct: 234 GGIYKELGRFNEALSSTLKSLEH 256
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 80/185 (43%)
Query: 19 KRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAH 78
KR + S+ K+ + EA + GN ++A KE++ P ++ LG
Sbjct: 8 KRNKANKSRAKIIKQGEALAREAIKHHVNGNLKKAEMAYKEIINSGLQSPIIFSNLGAIC 67
Query: 79 SALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISL 138
G + A FY A + + + L G QA+ ++++ +P +
Sbjct: 68 QTNGRTEEAIAFYKNAIKIDQRHHDAFSNLGALYKDLGQYNQALDATVKSLKLKPDNPIA 127
Query: 139 RIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLK 198
++L S Y ++G ++A + + + P++ D+ ++++ G +++ + L+
Sbjct: 128 LLNLGSIYKDLGKLDQALTATVKSIEQNPNSADSFINLGSIYIELGNLDQALASTLKSLE 187
Query: 199 VHPSD 203
++P +
Sbjct: 188 LNPGN 192
>gi|418540145|ref|ZP_13105707.1| TPR domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418546395|ref|ZP_13111614.1| TPR domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385362541|gb|EIF68351.1| TPR domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385364697|gb|EIF70405.1| TPR domain-containing protein [Burkholderia pseudomallei 1258b]
Length = 614
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|298244298|ref|ZP_06968104.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
44963]
gi|297551779|gb|EFH85644.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
44963]
Length = 517
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI + L+P+ L A+ +G+++ A Y A +L P + ++
Sbjct: 269 GDLQLAIVNYGRSIELNPSYFWAIYKLADAYQEIGDYQQALISYNQAINLKPLKAEIYNN 328
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ GD A+ RQ+I P +LA Y EIGD+E+A SY Q KL P
Sbjct: 329 RGVAYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQALISYNQAIKLEP 388
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
D ++ K G ++I + +K++PS
Sbjct: 389 LKADIYNNRGNVYHKLGIVYQAIVDYSQSIKLNPS 423
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 25/259 (9%)
Query: 15 KLNKKRGRRKGSKNKLSPGVTKMLGEASLQYA-YGNFEQAISLLKEVVRLSPNLPETYNT 73
K + K +GS + + + + YA G+ ++A+S K+ + L P+ Y
Sbjct: 201 KTSSKPAETEGSDSFVEDSFSINYVNIGIDYAEAGDIQKALSNFKKAIELDPSDSIAYYN 260
Query: 74 LGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL-LTFAVQK-GDTAQAMYYIRQAIRA 131
GLA+ LG+ + A Y + L+P S W L A Q+ GD QA+ QAI
Sbjct: 261 CGLAYEKLGDLQLAIVNYGRSIELNP--SYFWAIYKLADAYQEIGDYQQALISYNQAINL 318
Query: 132 EPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIG 191
+P + + Y ++GD++ A +Y Q +L P A A + + G +++
Sbjct: 319 KPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQALI 378
Query: 192 ILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKVKAG 251
+ +K+ P AD+ N Y K I + IV +S +KL
Sbjct: 379 SYNQAIKLEPLKADIYN--------NRGNVYHKL--GIVYQAIVDYSQS---IKLNPSHP 425
Query: 252 ICYL-------RLGNMEKA 263
I Y +LGN+E+A
Sbjct: 426 ITYFNRGGSHAKLGNIEQA 444
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 40/192 (20%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+++QA+ + + L P E YN G+A+ LG+ + A Y + L+P + ++
Sbjct: 303 GDYQQALISYNQAINLKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNP---SYFRA 359
Query: 108 LLTFAV---QKGDTAQAMYYIRQAIRAEP-----------------------KDISLRIH 141
+ AV + GD QA+ QAI+ EP D S I
Sbjct: 360 IYNLAVAYQEIGDFEQALISYNQAIKLEPLKADIYNNRGNVYHKLGIVYQAIVDYSQSIK 419
Query: 142 L-----------ASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI 190
L + ++G+ E+A E Y + +L P +A + AQ++ G+ ++I
Sbjct: 420 LNPSHPITYFNRGGSHAKLGNIEQAIEDYSRAIELDPSFANAYFSRAQIYDAIGELQQAI 479
Query: 191 GILEEYLKVHPS 202
G ++ K+ PS
Sbjct: 480 GDYDKAFKLKPS 491
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 24/236 (10%)
Query: 49 NFEQAISLLKEVVRLSPNLPET--------------YNTLGLAHSALGNHKSAFDFYVIA 94
N+ QAI L + + S ET Y +G+ ++ G+ + A + A
Sbjct: 188 NYNQAIKLDPSLEKTSSKPAETEGSDSFVEDSFSINYVNIGIDYAEAGDIQKALSNFKKA 247
Query: 95 AHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEK 154
L P DS + + GD A+ ++I P LA Y EIGDY++
Sbjct: 248 IELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIELNPSYFWAIYKLADAYQEIGDYQQ 307
Query: 155 AAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVA 214
A SY Q L P + + K G +I + ++++PS I L
Sbjct: 308 ALISYNQAINLKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNPS--YFRAIYNLAV 365
Query: 215 ILMENNAYEKTLQHIEHAQIVRFSGKELPLKLKV--KAGICYLRLGNMEKAEILFA 268
E +E+ L I + Q ++ PLK + G Y +LG + +A + ++
Sbjct: 366 AYQEIGDFEQAL--ISYNQAIKLE----PLKADIYNNRGNVYHKLGIVYQAIVDYS 415
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 49 NFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQL 108
+F QA S + ++L P+ + Y G A++ +G + A Y A L P D+ +
Sbjct: 79 DFLQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNYNKAIELDPSDAIYYCNR 138
Query: 109 LTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHL-ASFYVEIGDYEKAAESYEQIQKLFP 167
+ + QA+ +AI +P +++ HL Y ++GD ++ +Y Q KL P
Sbjct: 139 GIAYFELNELKQALTNCNKAIELDPS-LAMAYHLRGKIYTKLGDSQQGLLNYNQAIKLDP 197
>gi|260060544|gb|ACX30004.1| transmembrane and tetratricopeptide repeat containing 1A [Homo
sapiens]
Length = 882
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 565 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGV 624
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ A E Y++ ++
Sbjct: 625 FLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE 684
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I +E + PS +L + + ++A++ + EK HI
Sbjct: 685 ILSPLGA-LYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 743
>gi|328714601|ref|XP_001947755.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Acyrthosiphon pisum]
Length = 1076
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
A + Y G FE+AIS K+V+ ++P+L + LG+ H + +++A + + A L P+
Sbjct: 262 AYVYYKSGKFEKAISKYKQVLEINPDLMNAHFYLGMTHLKISEYQNAANAFWNAIVLEPE 321
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV-EIGDYEKAAESY 159
+ + K+L + + ++ ++ +P++ +L + LA + +I +Y++AA +
Sbjct: 322 NVTVLKKLAVTYCYVENMVLCVEIYKKCLKLQPENFNLNLELAMICLHKIKNYQEAAIYF 381
Query: 160 EQIQKLFPDNVDATK 174
++ L P+ +D K
Sbjct: 382 KKCIHLNPERIDLYK 396
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 130/321 (40%), Gaps = 25/321 (7%)
Query: 60 VVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTA 119
V+ + P L + N G L K A + + IA + + + L + G
Sbjct: 213 VLSIEPKLYKVRNKYGKLLLKLNKIKDAKEQFKIAHNCAIECPETLNNLAYVYYKSGKFE 272
Query: 120 QAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQL 179
+A+ +Q + P ++ +L +++I +Y+ AA ++ L P+NV K A
Sbjct: 273 KAISKYKQVLEINPDLMNAHFYLGMTHLKISEYQNAANAFWNAIVLEPENVTVLKKLAVT 332
Query: 180 FLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAI-----LMENNAYEKTLQHIEHAQI 234
+ + I ++ LK+ P + +L++ ++ + E Y K H+ +I
Sbjct: 333 YCYVENMVLCVEIYKKCLKLQPENFNLNLELAMICLHKIKNYQEAAIYFKKCIHLNPERI 392
Query: 235 VRFSGKELPLK----------LKVKAGICYLRLGNMEKAEILFAD---LQWKNAIDHADL 281
+ + L+ + G YL + E A F L NAI H
Sbjct: 393 DLYKNLFVALRKVNDYQNASDTCMSMGDLYLESDDQENARNAFCCAILLNPGNAIAHW-- 450
Query: 282 ITEVADTLMSLGHSNSAL-KYYHFLETNAGTDNGYLYLKLAECYLSLKERAHAIMFFYKA 340
++ T+ +LGH + AL +Y H +E + Y + + L E+ AI ++
Sbjct: 451 --KMGLTMYNLGHWDLALTRYKHAIEIMPNLADAYCDMAVIFDEQDLFEK--AIEYYKMT 506
Query: 341 LDRFEDNIDARLTLASLLLEE 361
+ N++A L LA +L ++
Sbjct: 507 ISLKPSNLNAHLNLADILFKQ 527
>gi|167816884|ref|ZP_02448564.1| TPR domain protein [Burkholderia pseudomallei 91]
Length = 614
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 86/224 (38%), Gaps = 9/224 (4%)
Query: 16 LNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGN-------FEQAISLLKEVVRLSPNLP 68
L ++GR + + + + V +A+LQ GN + AI + + L+P P
Sbjct: 44 LRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGNALKALGRLDDAIERFRNALTLAPAFP 103
Query: 69 ETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA 128
+ LG A++A H A D + A L+P D+++ L G A+ R+A
Sbjct: 104 LAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGRHDDALEAFRRA 163
Query: 129 IRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTAR 188
+ P +L +GD + A + P V A GQ A+
Sbjct: 164 LELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQ 223
Query: 189 SIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHA 232
+ E L + P A L++ L L + L H EHA
Sbjct: 224 AQHAFEAALALQPRFA-LALFG-LANTLAARGRHRDALPHYEHA 265
>gi|126452464|ref|YP_001067211.1| hypothetical protein BURPS1106A_2967 [Burkholderia pseudomallei
1106a]
gi|167846787|ref|ZP_02472295.1| tetratricopeptide repeat protein [Burkholderia pseudomallei B7210]
gi|242314115|ref|ZP_04813131.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|403519633|ref|YP_006653767.1| hypothetical protein BPC006_I3003 [Burkholderia pseudomallei
BPC006]
gi|126226106|gb|ABN89646.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
gi|242137354|gb|EES23756.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|403075276|gb|AFR16856.1| TPR repeat-containing protein [Burkholderia pseudomallei BPC006]
Length = 614
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|254295602|ref|ZP_04963060.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|157805565|gb|EDO82735.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
Length = 614
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 27 KNKLSPGVTKMLGEASLQYAYGNFEQ---AISLLKEVVRLSPNLPETYNTLGLAHSALGN 83
+N L+ L +L AY E+ A+ K + L+P +N LG A +ALG
Sbjct: 93 RNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNNLGNALNALGR 152
Query: 84 HKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLA 143
H A + + A L P + L GDT A+ + R AI AEP ++ +L
Sbjct: 153 HDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEPHFVAAHFNLG 212
Query: 144 SFYVEIGDYEKAAESYEQIQKLFP 167
+ IG + +A ++E L P
Sbjct: 213 NALDAIGQHAQAQHAFEAALALQP 236
>gi|411118571|ref|ZP_11390952.1| methyltransferase, FkbM family [Oscillatoriales cyanobacterium
JSC-12]
gi|410712295|gb|EKQ69801.1| methyltransferase, FkbM family [Oscillatoriales cyanobacterium
JSC-12]
Length = 928
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 9/269 (3%)
Query: 5 NYGGYRKKTRKLNKKRGRRKGSKNKLSPGVTKMLGEASLQYAYGNFEQAISLLKEVVRLS 64
N G K R+ ++ + S + A Y ++AI+ ++ V L
Sbjct: 76 NLGSVWLKLRRFDEAIAHHRKSVELMPQNAKAHYNLAIALYENNQVDEAITYYQQAVALM 135
Query: 65 PNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYY 124
P ++ LG+A G A Y A L P ++ L Q+G +A+
Sbjct: 136 PEYANAHHNLGMALYRQGKADEAITHYQKAIALEPNHASARNSLGVALYQQGKIDEAIEQ 195
Query: 125 IRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCG 184
RQAI P +S +L + E+AA ++ L PD +A + G
Sbjct: 196 YRQAIATLPNYVSAHDNLGIALKQQQKLEEAATHFQTAISLRPDYANAYINLGNTMRELG 255
Query: 185 QTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQHIEHAQIVRFSGKELPL 244
++I E +++ P++AD + +L++ +E+ + E A R + L
Sbjct: 256 NYDQAIAYCRESIRLQPTNADAH--NTYGCVLVDLGRFEEAIACYEAAIQHRPDFADAHL 313
Query: 245 KLKVKAGICYLRLGNMEKAEILFADLQWK 273
L GI L++G + FA+ W+
Sbjct: 314 NL----GIILLQVGEFRRG---FAEYHWR 335
>gi|389798105|ref|ZP_10201132.1| hypothetical protein UUC_10267 [Rhodanobacter sp. 116-2]
gi|388445760|gb|EIM01818.1| hypothetical protein UUC_10267 [Rhodanobacter sp. 116-2]
Length = 935
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 82 GNHKSAFDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIH 141
G+H++A Y P++ A L A +GD A+A +QAI PK + I
Sbjct: 526 GHHEAAASRYATVLRKDPRNVAAMTALGQLAALQGDRAEAAKRFKQAIDTAPKSPTAYIA 585
Query: 142 LASFYVEIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHP 201
L Y E G Y++A + +Q+ PDN A L G ++ +L++ + P
Sbjct: 586 LVVLYGEDGKYDEAVSTAKQLVAASPDNPAALNALGAAELNAGHHGEALKVLQQAVNFAP 645
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 42/193 (21%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G +++A+S K++V SP+ P N LG A G+H A A + +P+
Sbjct: 594 GKYDEAVSTAKQLVAASPDNPAALNALGAAELNAGHHGEALKVLQQAVNFAPQVPLYRTN 653
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDIS---LRIHL---------------------- 142
L + DT A + I+A+P ++ LR L
Sbjct: 654 LARAQILGKDTKAAAGNLDAVIKADPGQVTAVVLRALLKSQDHDLAGATALAQMLQKQPA 713
Query: 143 ---ASFYVEIGD-------YEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSI-- 190
A F +E GD Y +AA++Y+Q KL D K+ FL ++ +
Sbjct: 714 TKAAGFTLE-GDLYMANKSYREAAQAYQQGLKLQYDRPLVVKS----FLALNESGANAPE 768
Query: 191 GILEEYLKVHPSD 203
G+L ++L HP D
Sbjct: 769 GVLRDWLAKHPDD 781
>gi|383774716|ref|YP_005453785.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
gi|381362843|dbj|BAL79673.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
Length = 461
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G ++A++ E +RL P +PE Y+ GL+ +A+G + A Y A L+P+ + +
Sbjct: 223 GQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNR 282
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
++ + KG+ A+ A++ +P + A Y ++G+ KA YE +L P
Sbjct: 283 GDSYHL-KGELGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALRLDP 341
Query: 168 DNVDAT 173
N +A
Sbjct: 342 GNDNAA 347
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 64/170 (37%), Gaps = 43/170 (25%)
Query: 33 GVTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYV 92
GVT LG G+ E+A+ L E +RL PN P +Y G A+ LG
Sbjct: 182 GVTYYLG--------GDNEKAVRDLSEALRLDPNRPRSYTNRGAAYKKLG---------- 223
Query: 93 IAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDY 152
QL G +AIR +PK + +G+Y
Sbjct: 224 --------------QLDKAVADDG----------EAIRLDPKVPEYYDNRGLSLAAMGEY 259
Query: 153 EKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPS 202
+KA Y+Q +L P T G LK G+ ++ E LK+ P+
Sbjct: 260 DKAIADYDQALRLAPRPNFFTNRGDSYHLK-GELGAALSDYESALKLDPN 308
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%)
Query: 43 LQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDS 102
L+ A G+ +A + L + + L P E+Y G+ ++ A Y A L P D+
Sbjct: 116 LREAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTNQRRLDRALADYDQAIKLKPDDA 175
Query: 103 ALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQI 162
W GD +A+ + +A+R +P + + Y ++G +KA +
Sbjct: 176 QAWSDRGVTYYLGGDNEKAVRDLSEALRLDPNRPRSYTNRGAAYKKLGQLDKAVADDGEA 235
Query: 163 QKLFP 167
+L P
Sbjct: 236 IRLDP 240
>gi|345860292|ref|ZP_08812612.1| tetratricopeptide repeat family protein [Desulfosporosinus sp. OT]
gi|344326608|gb|EGW38066.1| tetratricopeptide repeat family protein [Desulfosporosinus sp. OT]
Length = 389
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 47 YGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWK 106
+G++ +AI L +R +P ET LG+ ++ + A + L P++S W+
Sbjct: 135 FGDWREAIKALDNSLRAAPQNAETNYRLGIIYAYHEENLEALRCFQGCCQLRPRESLYWE 194
Query: 107 QLLTFAVQKGDTAQAMYYIRQAIR-AEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKL 165
+ A A +A+R D++ R LA YV+ + +K + Y+ + K
Sbjct: 195 MKAEMHLLLEQVADACISFDRALRYGGTPDLAAR--LAYCYVQNNEIKKGIQYYKFVLKY 252
Query: 166 FPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKT 225
PD+ D+ A ++ G++ ++ +LE ++P D IL+ N A+ T
Sbjct: 253 EPDHYDSINNLAAVYQNEGRSQDALNLLERAKNIYPKD----------PILLNNIAF--T 300
Query: 226 LQHIEHAQIVRFSGKEL-------PLKLKVKAGICYLRLGNMEKA 263
L H+ + +E PL L +C+ R GN ++
Sbjct: 301 LVHLGRTRKAEEYYREALELVPNHPLIL-YNLSVCFTRKGNWQEG 344
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 41 ASLQYAY---GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHL 97
A L Y Y ++ I K V++ P+ ++ N L + G + A + A ++
Sbjct: 227 ARLAYCYVQNNEIKKGIQYYKFVLKYEPDHYDSINNLAAVYQNEGRSQDALNLLERAKNI 286
Query: 98 SPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAE 157
PKD L + V G T +A Y R+A+ P + +L+ + G++++
Sbjct: 287 YPKDPILLNNIAFTLVHLGRTRKAEEYYREALELVPNHPLILYNLSVCFTRKGNWQEGIN 346
Query: 158 SYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKV 199
S Q+ +L P++ ++ + Q +I + LK+
Sbjct: 347 SLNQLIELDPNHSAGWALLGNIYDQMDQFDTAIDCFNKALKL 388
>gi|222637020|gb|EEE67152.1| hypothetical protein OsJ_24219 [Oryza sativa Japonica Group]
Length = 1053
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 139/326 (42%), Gaps = 54/326 (16%)
Query: 115 KGDTAQAMYYIRQAIR--AEPKDISLRIH-LASFYVEIGDYEKAAESYEQIQKLFPDNVD 171
KGD A Y ++ ++P+D L L ++ DY+ + S+E++ ++ P+N +
Sbjct: 289 KGDIETAGRYYMASVNEISKPQDFVLPFFGLGQIQLKFADYKSSLASFEKVLEVHPENCE 348
Query: 172 ATKTGAQLFLKCGQTARSIGILEEYLKVHPSD--ADLSVIDLLV----AILMEN------ 219
+ K ++ K G+ ++I ++ ++ P D A + + +LLV A ME
Sbjct: 349 SLKAIGHIYAKSGENDKAIETFKKVTRIDPKDHQAFMELGELLVQSDWATAMEYLKTVRL 408
Query: 220 ----NAYEKTLQHI-----EHAQIVRFSGKELPLKLKVKAGICYLRLGNMEKAEILF--- 267
Y +L I + +++ +G+++P++L G+ + G +E AE F
Sbjct: 409 FTSLEVYSVSLYQILPWISQARNLLKKAGEKIPIELLNGIGLLHFEKGELEMAEQSFKEA 468
Query: 268 -ADLQWKNAIDHADLITEVADTLMSLGHSNSALKYYHFLETNAGT------DNGYLYLKL 320
D W + ID + V ++++ ++ LE GT D
Sbjct: 469 LGDGFWVSIIDGS-----VGSSVVNWSIQYRDQSFFQQLEEE-GTPLELPWDKVTTLFNY 522
Query: 321 AECYLSLKERAHAIMFFYKALDRFEDNIDARLTLASLLLEEAKEEEAITLLSPPKDLD-- 378
A + L + A +F+ + ++ D ID L LA++ E+ + +I L+ +D
Sbjct: 523 ARLFEELHDTVKASLFYRLIIFKYPDYIDTYLRLAAIAKEKNNLQLSIELIGDALKIDDK 582
Query: 379 ---------SLDMNSDKSNPWWLNEK 395
SL++ D++ WL K
Sbjct: 583 YPNALSMLGSLELQGDET---WLTAK 605
>gi|428320933|ref|YP_007118815.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244613|gb|AFZ10399.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 471
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 29 KLSPGVTKMLGE-ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSA 87
+L P + G +++ G+ + AI+ L +V+ L P+L + Y GL S LG+ K A
Sbjct: 207 ELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGA 266
Query: 88 FDFYVIAAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYV 147
+ A L P D+ + + GD A+ +AI +P D + +
Sbjct: 267 IADFNKAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRY 326
Query: 148 EIGDYEKAAESYEQIQKLFPDNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLS 207
+GD + A Y + +L PD+ A + + G I + +++ P AD
Sbjct: 327 ILGDKKGAIADYNKAIELKPDDAQAYFNRGNVRSELGDKKGEIADYNKVIELQPDYADAY 386
Query: 208 VIDLLV 213
+ LV
Sbjct: 387 INRGLV 392
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ + + L P+L Y GL S LG+ K A Y A L P + +
Sbjct: 159 GDKKGAIADYNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGN 218
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
T + GD A+ + + I +P + F E+GD + A + + +L P
Sbjct: 219 RGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFNKAIELQP 278
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ A + G +I + +++ P DA
Sbjct: 279 DDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDA 315
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%)
Query: 41 ASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPK 100
+++Y G+ + AI+ + + L P+L E Y GL S LG+ K A A L P
Sbjct: 50 GNVRYNLGDKKGAIADFNKAIELQPDLAEAYGNRGLFRSELGDKKGAIADLNKAIELQPD 109
Query: 101 DSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYE 160
+ + + GD A+ +AI +P + E+GD + A Y
Sbjct: 110 LALAYVNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYN 169
Query: 161 QIQKLFPD 168
+ +L PD
Sbjct: 170 KAIELKPD 177
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 61/157 (38%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
G+ + AI+ + + L P+ + Y G S LG+ K A L P + +
Sbjct: 193 GDKKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYN 252
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
F + GD A+ +AI +P D + +GD + A + + +L P
Sbjct: 253 RGLFRSELGDKKGAIADFNKAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQP 312
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDA 204
D+ A + G +I + +++ P DA
Sbjct: 313 DDAFAYYNRGNVRYILGDKKGAIADYNKAIELKPDDA 349
>gi|409992341|ref|ZP_11275537.1| hypothetical protein APPUASWS_14728, partial [Arthrospira platensis
str. Paraca]
gi|409936782|gb|EKN78250.1| hypothetical protein APPUASWS_14728, partial [Arthrospira platensis
str. Paraca]
Length = 496
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 37 MLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAH 96
+ + +L Y G ++A+ ++ + + PN ++ G+A L + A + + A
Sbjct: 157 LTSKGTLLYQMGEPQKALDTHEQAIAIDPNYARAWHGKGIALIGLQRYDEAVEAFDQAKT 216
Query: 97 LSPKDSALWKQLLTFAVQKGDTAQAMYYIRQA-------IRAEPKDISLRIHLASFYVEI 149
L P ++W+ +G A+A +A +R +P+ + + S ++
Sbjct: 217 LRPSAPSVWQSKAIALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL 276
Query: 150 GDYEKAAESYEQIQKLFPDNVDA-TKTGAQLFLKCGQTARSIGILEEYLKVHP 201
G +E+A ESYE+ ++ P + A + G LF G+T ++ I + ++V P
Sbjct: 277 GRHEQALESYEKALEINPQHFQALLQKGNVLFSPLGRTEEAVTISDRAIEVQP 329
>gi|423064173|ref|ZP_17052963.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|406714344|gb|EKD09511.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 370
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN Q++ L++ + L+PN P Y LG+A+ G+ +A D + AA LSP + + Q
Sbjct: 195 GNASQSLQFLQQAMELAPNQPNIYLKLGIAYLEQGDRTAALDAFQEAARLSPFNGEIQFQ 254
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
+ + + AM +QA+ EP ++ + + + + DY A S+ + F
Sbjct: 255 IGEIFRLQENFEGAMQAYQQALAMEPDLVAANMAIGEIQLRLRDYIGAIVSFRRAADRFA 314
Query: 168 D 168
D
Sbjct: 315 D 315
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 48 GNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQ 107
GN ++A+++ + V+L + + Y+ L + G+ ++A FY A L P+++ +
Sbjct: 59 GNMDEALNVYLQAVQLDNSDAKIYSALAYVQALRGDFEAAAKFYRDAITLDPQNADFYYG 118
Query: 108 LLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFP 167
L + D A R+A + + +I+ + LA+ DY A ++Y+ L P
Sbjct: 119 LGYTLARLQDYPAAAQAYRRATQLQRDNINAHLGLAASLFRQQDYRGAIQAYQAALALEP 178
Query: 168 DNVDATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSVIDLLVAILMENNAYEKTLQ 227
++ +A + +L+ G ++S+ L++ +++ P+ ++ + L +A L + +
Sbjct: 179 NSWEANASMGMAWLRQGNASQSLQFLQQAMELAPNQPNI-YLKLGIAYLEQGDRTAALDA 237
Query: 228 HIEHAQIVRFSGK 240
E A++ F+G+
Sbjct: 238 FQEAARLSPFNGE 250
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%)
Query: 34 VTKMLGEASLQYAYGNFEQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVI 93
+ LG A+ + ++ AI + + L PN E ++G+A GN + F
Sbjct: 147 INAHLGLAASLFRQQDYRGAIQAYQAALALEPNSWEANASMGMAWLRQGNASQSLQFLQQ 206
Query: 94 AAHLSPKDSALWKQLLTFAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYE 153
A L+P ++ +L +++GD A+ ++A R P + ++ + + ++E
Sbjct: 207 AMELAPNQPNIYLKLGIAYLEQGDRTAALDAFQEAARLSPFNGEIQFQIGEIFRLQENFE 266
Query: 154 KAAESYEQIQKLFPDNVDATKTGAQLFLKC 183
A ++Y+Q + PD V A ++ L+
Sbjct: 267 GAMQAYQQALAMEPDLVAANMAIGEIQLRL 296
>gi|27469599|gb|AAH42083.1| Transmembrane and tetratricopeptide repeat containing 1 [Homo
sapiens]
Length = 774
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 51 EQAISLLKEVVRLSPNLPETYNTLGLAHSALGNHKSAFDFYVIAAHLSPKDSALWKQLLT 110
E+AI+LLK+ ++ P + Y++L + K A + Y P S L
Sbjct: 457 EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGV 516
Query: 111 FAVQKGDTAQAMYYIRQAIRAEPKDISLRIHLASFYVEIGDYEKAAESYEQIQKLFPDNV 170
F V G +A+ + +QAI+ P ++L Y +G+ A E Y++ ++
Sbjct: 517 FLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE 576
Query: 171 DATKTGAQLFLKCGQTARSIGILEEYLKVHPSDADLSV-IDLLVAILMENNAYEKTLQHI 229
+ GA L+ G+ ++ I +E + PS +L + + ++A++ + EK HI
Sbjct: 577 ILSPLGA-LYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 635
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,366,584,584
Number of Sequences: 23463169
Number of extensions: 422393226
Number of successful extensions: 1432067
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6106
Number of HSP's successfully gapped in prelim test: 6784
Number of HSP's that attempted gapping in prelim test: 1359687
Number of HSP's gapped (non-prelim): 62194
length of query: 687
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 537
effective length of database: 8,839,720,017
effective search space: 4746929649129
effective search space used: 4746929649129
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)