BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005643
(686 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAJ3|FTSHC_ARATH ATP-dependent zinc metalloprotease FTSH 12, chloroplastic
OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2
Length = 1008
Score = 1232 bits (3187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/686 (85%), Positives = 641/686 (93%)
Query: 1 MKEVEKSLRKDMVEKVTETQGTRALWIAKRWWRYRPKLPYTYFLEKLDSSEVAAVVFTED 60
MKEVEKSLR+D++ + +ET+GTRALWI+KRWWRYRPKLPYTYFL+KLDSSEVAAVVFTED
Sbjct: 323 MKEVEKSLREDVIGRTSETEGTRALWISKRWWRYRPKLPYTYFLQKLDSSEVAAVVFTED 382
Query: 61 LKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLPGIL 120
LKRLYVTMKEGFPLEY+VDIPLDPYLFETI ++G EVDLLQKRQIHYF+KV IALLPGIL
Sbjct: 383 LKRLYVTMKEGFPLEYIVDIPLDPYLFETICNAGVEVDLLQKRQIHYFMKVFIALLPGIL 442
Query: 121 ILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVW 180
IL IRE+ MLL ITS R LYKKYNQLFDMAYAENFILPVG VS+TKSMYKEVVLGGDVW
Sbjct: 443 ILWFIRESAMLLLITSKRFLYKKYNQLFDMAYAENFILPVGDVSETKSMYKEVVLGGDVW 502
Query: 181 DLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEF 240
DLLDELMIYMGNPMQYYE+ V FVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEF
Sbjct: 503 DLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEF 562
Query: 241 TDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDK 300
TDSEKSGAA+INEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDG+K
Sbjct: 563 TDSEKSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEK 622
Query: 301 ERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAG 360
E+TGIDRFSLRQAVIFICATNRPDELDLEFVR GRIDRRLYIGLPDAKQRVQIF VHSAG
Sbjct: 623 EKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAG 682
Query: 361 KQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGM 420
K LAED++F +LVFRTVGFSGADIRNLVNE+ IMSVRKG S I QQDIVDVLDKQLLEGM
Sbjct: 683 KNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGM 742
Query: 421 GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISV 480
GVLLTEEEQQKCEQSVS+EKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA+SV
Sbjct: 743 GVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAVSV 802
Query: 481 FYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVI 540
FYPRED +DQGYTTFGY+KMQMVVAHGGRCAER+VFGD+VTDGGKDDLEKITKIAREMVI
Sbjct: 803 FYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGDNVTDGGKDDLEKITKIAREMVI 862
Query: 541 SPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYI 600
SPQ+ARLGL L +++G++D PD+ DG+LIKYRWD P V+P +M++E+SELFTRELTRYI
Sbjct: 863 SPQSARLGLTQLVKKIGMVDLPDNPDGELIKYRWDHPHVMPAEMSVEVSELFTRELTRYI 922
Query: 601 EETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKLQGLSPVMFEDFVKPFQINLQ 660
EETEELAMN LR N+HIL++I +ELLE SRITGLEVEEK++ LSP+MFEDFVKPFQIN
Sbjct: 923 EETEELAMNALRANRHILDLITRELLEKSRITGLEVEEKMKDLSPLMFEDFVKPFQINPD 982
Query: 661 EEGPLPHNDRLRYKPLDIYPAPLHRC 686
+E LPH DR+ Y+P+D+ APLHR
Sbjct: 983 DEELLPHKDRVSYQPVDLRAAPLHRS 1008
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 332/629 (52%), Gaps = 72/629 (11%)
Query: 30 RWWRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFET 89
R + R L Y+ F+ +++++++ V + D + V G P Y+V++P DP L
Sbjct: 31 RPTQTRETLSYSDFVNRVEANQIERVNLSADRTQAQVPNPSGGP-PYLVNLPNDPDLINI 89
Query: 90 IASSGAEVDLLQKRQIHYFLKVLIAL-LPGILILSLIRETVMLLHITSSRLLYKKYNQLF 148
+ ++ + + ++ ++ L LP +L++ + L+++ Q
Sbjct: 90 LTQHNVDIAVQPQSDEGFWFRIASTLFLPILLLVGIF-------------FLFRRA-QSG 135
Query: 149 DMAYAENFILPVGYVSDTKSMYKEV-VLGGDVWDL------LDELMIYMGNPMQYYERGV 201
+ A NF G M + V GDV + L E++ ++ N ++ E G
Sbjct: 136 PGSQAMNF----GKSKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGA 191
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARR 260
+ +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF + GA+R+ ++F A+
Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKA 251
Query: 261 NAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
NAP VF+DEIDA+ AG D R + T L+ ++DG + TGI I
Sbjct: 252 NAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TLNQLLTEMDGFEGNTGI---------I 301
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
+ ATNRPD LD +RPGR DR++ + PD R +I +VH+ GK L++DV+ +++ R
Sbjct: 302 IVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARR 361
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GF+GAD+ NL+NE+ I++ R+ ++I ++ D +D+ VL E++ +
Sbjct: 362 TPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDR-------VLAGPEKKNRV--- 411
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
+S ++K L+A HEAGH ++ L P +D ++P G+ ++ F P ED ++ G +
Sbjct: 412 MSEKRKTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSR 471
Query: 496 GYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMVIS-PQNARLGLAGLT 553
YL+ QM VA GGR AE ++FG ++VT G +DL+++ ++AR+MV + RLG L
Sbjct: 472 SYLQNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALG 531
Query: 554 RRVG--LLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGL 611
R+ G L R +SD D + E + E+++ +++ + A L
Sbjct: 532 RQGGGVFLGRDIASD---------------RDFSDETAAAIDEEVSQLVDQAYQRAKQVL 576
Query: 612 RDNKHILEIIAKELLENSRITGLEVEEKL 640
+N+ IL+ +A+ L+E + E++ L
Sbjct: 577 VENRGILDQLAEILVEKETVDSEELQTLL 605
>sp|Q39444|FTSH_CAPAN ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment)
OS=Capsicum annuum GN=FTSH PE=2 SV=1
Length = 662
Score = 278 bits (712), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 314/614 (51%), Gaps = 74/614 (12%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIA 91
WRY + FL + +V V F++D L +T +G +V P DP L + +A
Sbjct: 104 WRY------SEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRANVIV--PNDPDLIDILA 155
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALL-PGILILSLIRETVMLLHITSSRLLYKKYNQLFDM 150
+G ++ + + + V+ LL P I L L+++
Sbjct: 156 MNGVDISVSEGEGGNGLFSVIGNLLFPFIAFAGLF-------------FLFRRSQGGPGG 202
Query: 151 AYAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERG 200
+ G +KS ++EV V G D L L E++ ++ NP +Y G
Sbjct: 203 PGGLGGPMDFGR---SKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALG 259
Query: 201 VQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIAR 259
+ +G LL GPPGTGKTL AR +A E+G+PF + +EF + GA+R+ +F A+
Sbjct: 260 AKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAK 319
Query: 260 RNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAV 314
AP VF+DEIDA+ AG D R + T L+ ++DG FS V
Sbjct: 320 SKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDG---------FSGNSGV 369
Query: 315 IFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVF 374
I + ATNRPD LD +RPG+ DR++ + PD RV+I VHS GK LA+DV+F+++
Sbjct: 370 IVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIAR 429
Query: 375 RTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQ 434
RT GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K
Sbjct: 430 RTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER-IIAG---------PEKKNA 479
Query: 435 SVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTT 494
VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G +
Sbjct: 480 VVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYS 539
Query: 495 FGYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLT 553
YL+ QM VA GGR AE ++FG D+VT G +D +++++AR+MV RL G +
Sbjct: 540 RSYLENQMAVALGGRVAEEVIFGEDNVTTGASNDFMQVSRVARQMV-----ERL---GFS 591
Query: 554 RRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRD 613
+++G + + + + D ++ +++ E+ +E+ E A +
Sbjct: 592 KKIGQVAIGGGGGNPFLGQQMSTQK----DYSMATADVVDSEVRELVEKAYERAKQIITT 647
Query: 614 NKHILEIIAKELLE 627
+ IL +A+ L+E
Sbjct: 648 HIDILHKLAQLLIE 661
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 197/635 (31%), Positives = 319/635 (50%), Gaps = 74/635 (11%)
Query: 25 LWIAKRWWRYRPKLP------YTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVV 78
L K + P+LP Y+ FL + +V V F++D L +T +G V
Sbjct: 108 LNAPKPQAQTNPELPEVSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDG--RRATV 165
Query: 79 DIPLDPYLFETIASSGAEVDLLQKRQIHYFLKVLIA-LLPGILILSLIRETVMLLHITSS 137
+P DP L + +A +G ++ + + L LI L P I L
Sbjct: 166 TVPNDPDLIDILAMNGVDISVSEGDSAGNGLFNLIGNLFPFIAFAGLF------------ 213
Query: 138 RLLYKKYNQLFDMAYAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELM 187
L+++ + G +KS ++EV V G D L L E++
Sbjct: 214 -YLFQRSQGGPGGPGGLGGPMDFGR---SKSKFQEVPETGVTFADVAGADQAKLELQEVV 269
Query: 188 IYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKS 246
++ NP +Y G + +G LL GPPGTGKTL AR +A E+G+PF + +EF +
Sbjct: 270 DFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGV 329
Query: 247 GAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKE 301
GA+R+ ++F A+ AP VF+DEIDA+ AG D R + T L+ ++DG
Sbjct: 330 GASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQ-TINQLLTEMDG--- 385
Query: 302 RTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGK 361
FS VI + ATNRPD LD +RPGR DR++ + PD R++I VHS GK
Sbjct: 386 ------FSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGK 439
Query: 362 QLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMG 421
L +DV+FE++ RT G++GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G
Sbjct: 440 ALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALER-IIAG-- 496
Query: 422 VLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVF 481
+K VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F
Sbjct: 497 -------PEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 549
Query: 482 YPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMVI 540
P E+ ++ G + YL+ QM VA G R AE ++FG D+VT G +D +++++AR+MV
Sbjct: 550 APSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMV- 608
Query: 541 SPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYI 600
RL G ++++G + + + + D ++ +++ E+ +
Sbjct: 609 ----ERL---GFSKKIGQVAIGGGGGNPFLGQQMSTQK----DYSMATADVVDAEVRELV 657
Query: 601 EETEELAMNGLRDNKHILEIIAKELLENSRITGLE 635
E E A + + IL +A+ L+E + G E
Sbjct: 658 ERAYERATEIITTHIDILHKLAQLLIEKETVDGEE 692
>sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Medicago
sativa GN=FTSH PE=2 SV=1
Length = 706
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 189/620 (30%), Positives = 314/620 (50%), Gaps = 71/620 (11%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIA 91
WRY + FL + +V V F++D L +T +G +V P DP L + +A
Sbjct: 127 WRY------SEFLNAVKKGKVERVRFSKDGSVLQLTAVDGRRANVIV--PNDPDLIDILA 178
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMA 151
+G ++ + + Q + + +LL + L L++++
Sbjct: 179 MNGVDISVSEGEQGNGLFSFVGSLL------------LPFLAFAGLFLIFRRGQGGPGGP 226
Query: 152 YAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERGV 201
+ G +KS ++EV V G D L L E++ ++ NP +Y G
Sbjct: 227 GGLGGPMDFGR---SKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGA 283
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARR 260
+ +G LL GPPGTGKTL AR +A E+G PF + +EF + GA+R+ ++F A+
Sbjct: 284 KIPKGCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKS 343
Query: 261 NAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
AP VF+DEIDA+ AG D R + T L+ ++DG FS VI
Sbjct: 344 KAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDG---------FSGNSGVI 393
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
+ ATNRPD LD +RPGR DR++ + PD RV+I VHS GK LA+DV+F+++ R
Sbjct: 394 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARR 453
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GF+G D++NL+NE+ I++ R+ +I + +I D L++ ++ G +K
Sbjct: 454 TPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALER-IIAG---------PEKKNAV 503
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G +
Sbjct: 504 VSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 563
Query: 496 GYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRR 555
YL+ QM VA GGR AE + D+VT G +D +++++AR+MV R G +++
Sbjct: 564 SYLENQMAVALGGRVAEEVFGQDNVTTGASNDFMQVSRVARQMV-----ERF---GFSKK 615
Query: 556 VGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNK 615
+G + + + + D ++ +++ +E+ +++ E A + +
Sbjct: 616 IGQVAIGGGGGNPFLGQQMSSQK----DYSMATADIVDKEVRELVDKAYERATQIINTHI 671
Query: 616 HILEIIAKELLENSRITGLE 635
IL +A+ L+E + G E
Sbjct: 672 DILHKLAQLLIEKETVDGEE 691
>sp|Q5Z974|FTSH1_ORYSJ ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH1 PE=2 SV=1
Length = 686
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 193/621 (31%), Positives = 319/621 (51%), Gaps = 69/621 (11%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIA 91
WRY + FL + +V V F++D L +T +G V +P DP L + +A
Sbjct: 103 WRY------SEFLSAVKKGKVERVRFSKDGGLLQLTAIDG--RRATVVVPNDPDLIDILA 154
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMA 151
++G ++ + + A PG + + L L+++ Q A
Sbjct: 155 TNGVDISVAEGD----------AAGPGGFLAFVGNLLFPFLAFAGLFFLFRRA-QGGPGA 203
Query: 152 YAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERGV 201
P+ + +KS ++EV V G D L L E++ ++ NP +Y G
Sbjct: 204 GPGGLGGPMDF-GRSKSKFQEVPETGVTFVDVAGADQAKLELQEVVDFLKNPDKYTALGA 262
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARR 260
+ +G LL GPPGTGKTL AR +A E+G+PF + +EF + GA+R+ ++F A+
Sbjct: 263 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKA 322
Query: 261 NAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
AP VF+DEIDA+ AG D R + T L+ ++DG F+ VI
Sbjct: 323 KAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDG---------FAGNSGVI 372
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
+ ATNRPD LD +RPGR DR++ + PD RV+I +VHS GK LA+DV+FE++ R
Sbjct: 373 VLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARR 432
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K
Sbjct: 433 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER-IIAG---------PEKKNAV 482
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
VS EK+RL+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G +
Sbjct: 483 VSEEKRRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 542
Query: 496 GYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTR 554
YL+ QM VA GGR AE ++FG ++VT G +D +++++AR+MV R G ++
Sbjct: 543 SYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRVARQMV-----ERF---GFSK 594
Query: 555 RVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDN 614
++G + + + + D ++ +++ E+ +E+ A + +
Sbjct: 595 KIGQVAIGGPGGNPFLGQQMSSQK----DYSMATADVVDAEVRELVEKAYSRATQIITTH 650
Query: 615 KHILEIIAKELLENSRITGLE 635
IL +A+ L+E + G E
Sbjct: 651 IDILHKLAQLLMEKETVDGEE 671
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 275/525 (52%), Gaps = 60/525 (11%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIA 91
WRY + FL + +V V F++D L +T + V +P DP L + +A
Sbjct: 124 WRY------SEFLNAVKKGKVERVKFSKDGSVLQLTAVDN--RRATVIVPNDPDLIDILA 175
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMA 151
+G ++ + + + + LL +L L Y
Sbjct: 176 MNGVDISVSEGEGGNGLFDFIGNLLFPLLAFG--------------GLFYLFRGGQGGAG 221
Query: 152 YAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERGV 201
P+ + +KS ++EV V G D L L E++ ++ NP +Y G
Sbjct: 222 GPGGLGGPMDF-GRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGA 280
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARR 260
+ +G LL GPPGTGKTL AR +A E+G+PF + +EF + GA+R+ ++F A+
Sbjct: 281 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKS 340
Query: 261 NAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
AP VF+DEIDA+ AG D R + T L+ ++DG FS VI
Sbjct: 341 KAPCIVFIDEIDAVGRQRGAGMGGGNDEREQ-TINQLLTEMDG---------FSGNSGVI 390
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
+ ATNRPD LD +RPGR DR++ + PD RVQI VHS GK + +DV++E++ R
Sbjct: 391 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARR 450
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K
Sbjct: 451 TPGFTGADLQNLMNEAAILAARRELKEISKDEISDALER-IIAG---------PEKKNAV 500
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
VS EKKRL+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G +
Sbjct: 501 VSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 560
Query: 496 GYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAREMV 539
YL+ QM VA GGR AE ++FGD +VT G +D +++++AR+MV
Sbjct: 561 SYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMV 605
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 266/475 (56%), Gaps = 47/475 (9%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ N ++ G + RGVLL GPPGTGKTL AR +A E+G+PF SG+EF +
Sbjct: 181 LAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVE 240
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A++NAP VF+DEIDA+ AG D R + T L+ ++
Sbjct: 241 MFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TLNQLLTEM 299
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG + +GI I I ATNRPD LD +RPGR DR++ + PD + R++I V
Sbjct: 300 DGFEGNSGI---------IVIAATNRPDVLDAALLRPGRFDRQVTVDRPDFQGRLEILKV 350
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ GK L+ DV+ E+L RT GF+GAD+ NL+NE+ I++ R+ ++I +I D +D+ +
Sbjct: 351 HARGKTLSADVDLEKLARRTPGFTGADLANLLNEAAILAARRNLTEISMDEINDAVDR-V 409
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
L G +K ++ +S +K L+A HEAGH ++ L P +D ++P G+
Sbjct: 410 LAG---------PEKKDRLMSERRKELVAYHEAGHALVGSLLPNYDPIQKVTIIPRGQAG 460
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIA 535
++ F P +D D G TT +LK M VA GGR AE +V+G+ ++T G DL+++ +IA
Sbjct: 461 GLTWFMPSDD--DMGLTTRAHLKNMMTVALGGRVAEEVVYGESEITTGAASDLQQVARIA 518
Query: 536 REMVIS-PQNARLGLAGLTRRVG--LLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELF 592
R MV + RLG L R+ L R +++ D + E + L
Sbjct: 519 RNMVTRFGMSDRLGNVALGRQYANIFLGREIAAE---------------RDFSEETAALI 563
Query: 593 TRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKLQGLSPVM 647
E+ R + E + A +R+N+ +L+ IA+ L+E I G E++ + VM
Sbjct: 564 DEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAETIDGEELQAIIDNSEVVM 618
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 268/487 (55%), Gaps = 49/487 (10%)
Query: 166 TKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGT 215
+KS ++EV V G D L L E++ ++ NP +Y G + +G LL GPPGT
Sbjct: 247 SKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGT 306
Query: 216 GKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARRNAPAFVFVDEIDAI 274
GKTL AR +A E+G+PF + +EF + GA+R+ ++F A+ AP VF+DEIDA+
Sbjct: 307 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 366
Query: 275 -----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLE 329
AG D R + T L+ ++DG FS VI + ATNRPD LD
Sbjct: 367 GRQRGAGMGGGNDEREQ-TINQLLTEMDG---------FSGNSGVIVLAATNRPDVLDSA 416
Query: 330 FVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVN 389
+RPGR DR++ + PD RV+I VHS GK L +DV+F+++ RT GF+GAD++NL+N
Sbjct: 417 LLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMN 476
Query: 390 ESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEA 449
E+ I++ R+ +I + +I D L++ ++ G +K VS EKKRL+A HEA
Sbjct: 477 EAAILAARRELKEISKDEISDALER-IIAG---------PEKKNAVVSEEKKRLVAYHEA 526
Query: 450 GHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGR 509
GH ++ L P +D A ++P G+ ++ F P E+ ++ G + YL+ QM VA GGR
Sbjct: 527 GHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGR 586
Query: 510 CAERLVFGD-DVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGD 568
AE ++FGD +VT G +D +++++AR+M+ R G ++++G +
Sbjct: 587 VAEEVIFGDENVTTGASNDFMQVSRVARQMI-----ERF---GFSKKIGQVAVGGPGGNP 638
Query: 569 LIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLEN 628
+ + + D ++ +++ E+ +E+ + A + + IL +A+ L+E
Sbjct: 639 FMGQQMSSQK----DYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEK 694
Query: 629 SRITGLE 635
+ G E
Sbjct: 695 ETVDGEE 701
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 262 bits (670), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 259/467 (55%), Gaps = 51/467 (10%)
Query: 178 DVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASG 237
+V + L E++ ++ +P +Y E G + +GVLL GPPGTGKTL A+ +A E+G+PF SG
Sbjct: 164 EVKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSISG 223
Query: 238 AEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEA 291
++F + GA+R+ ++F A++N+P VF+DEIDA+ AG D R + T
Sbjct: 224 SDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGAGYGGGHDEREQ-TLNQ 282
Query: 292 LIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRV 351
L+ ++DG FS + +I I ATNRPD LD +RPGR DR++ I PD K R+
Sbjct: 283 LLVEMDG---------FSANEGIIIIAATNRPDVLDPALLRPGRFDRQIVIDRPDLKGRL 333
Query: 352 QIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDV 411
IF VH+ GK L DV+ E L RT GF+GADI NL+NE+ +++ R+ KI QD+ D
Sbjct: 334 AIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIANLMNEAALLAARRRKKKISMQDVEDA 393
Query: 412 LDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLP 471
+D+ L G +K + +S ++KR+ A HEAGH V+ H+ P D ++P
Sbjct: 394 IDRVLAGG---------PEKKSRVISEKEKRVTAYHEAGHAVVGHMLPHMDPLHKITIIP 444
Query: 472 GGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKI 531
G+ ++F P ED + + + +M +A GGR AE + FG ++T G +DD+E+
Sbjct: 445 RGRAMGYTLFLPVEDRYN---ISKSEILDRMTMALGGRAAEEITFG-EITSGAQDDIERT 500
Query: 532 TKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDG-----DLIKYRWDDPQVIPTDMTL 586
T+ AR MV G++ ++G L D D+ + R + +
Sbjct: 501 TQWARRMVTE--------WGMSEKLGPLTYGMKQDEVFLARDMTRLR---------NYSE 543
Query: 587 ELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITG 633
E++ L E+ +++ + A++ L +++ LE +++ LLE + G
Sbjct: 544 EVAGLIDEEVRKFVHMAYQRAIDILTEHRDALEKVSEVLLEKETLEG 590
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/613 (29%), Positives = 304/613 (49%), Gaps = 66/613 (10%)
Query: 36 PKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPL---DPYLFETIAS 92
PK+ Y ++ + +++VA V + ++ VT+K+ P + L +P L + S
Sbjct: 82 PKMNYGQLIDAIKANQVAKVEVDTNRRQAIVTLKDAPPGSKPQTVQLLDNNPELLNLLRS 141
Query: 93 SGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLL-----HITSSRLLYKKYNQL 147
+DL R L LL +L+++++ V+++ + + + + K
Sbjct: 142 RSETIDLDINRTPDN--SALYGLLTNLLVVAILIGLVVMVVRRSANASGQAMSFGKSKAR 199
Query: 148 FDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGV 207
F M + T + +V + + L E++ ++ P ++ G + RGV
Sbjct: 200 FQME------------AKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGV 247
Query: 208 LLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFV 266
LL GPPGTGKTL A+ +A E+G+PF SG+EF + GA+R+ ++F A+ NAP V
Sbjct: 248 LLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLV 307
Query: 267 FVDEIDAIAGR-----HARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATN 321
F+DEIDA+ GR + + R T L+ ++DG + +GI I I ATN
Sbjct: 308 FIDEIDAV-GRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGI---------IVIAATN 357
Query: 322 RPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSG 381
RPD LDL +RPGR DR++ + PD + R I +H+ K+L E+V + RT GF+G
Sbjct: 358 RPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTG 417
Query: 382 ADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKK 441
AD+ N++NE+ I + R+ I ++ D +D+ + G L V + K
Sbjct: 418 ADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEGTPL-----------VDSKSK 466
Query: 442 RLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQ 501
RL+A HE GH ++ L P D L+P G+ ++ F P E DQ T + +
Sbjct: 467 RLIAYHEVGHALIGTLCPGHDPVEKVTLIPRGQAQGLTWFTPDE---DQSLMTRNQMIAR 523
Query: 502 MVVAHGGRCAERLVFGDD-VTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLD 560
+ GGR AE ++FGDD VT G +D+EKIT +AR+MV +LG++ L GL+
Sbjct: 524 IAGLLGGRVAEEVIFGDDEVTTGAGNDIEKITYLARQMV-----TKLGMSSL----GLVA 574
Query: 561 RPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEI 620
+ D + W ++ + +++ RE+ + + A + +N++++++
Sbjct: 575 LEEEGDRNFSGGDWGK----RSEYSEDIAARIDREIQAIVTAAHQRATRIIEENRNLMDL 630
Query: 621 IAKELLENSRITG 633
+ L++ I G
Sbjct: 631 LVDALIDQETIEG 643
>sp|B8G4Q6|FTSH_CHLAD ATP-dependent zinc metalloprotease FtsH OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=ftsH PE=3 SV=1
Length = 656
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 265/500 (53%), Gaps = 49/500 (9%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ P ++ G + RGVL+ GPPGTGKTL +R +A E+G+PF SG+EF +
Sbjct: 181 LAEIVEFLKFPDKFAALGARIPRGVLMVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVE 240
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A+RNAP VF+DEIDA+ AG D R + T ++ ++
Sbjct: 241 MFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQ-TLNQILVEM 299
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F VI I ATNRPD LD VRPGR DR++ + PD + R++I V
Sbjct: 300 DG---------FDTNTNVIVIAATNRPDVLDPALVRPGRFDRQVVLDAPDVRGRIEILKV 350
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H GK LAEDVN E L +T GFSGAD+ N+VNE+ I++ R+ KI + D +++
Sbjct: 351 HVKGKPLAEDVNLEILARQTPGFSGADLMNVVNEAAILAARRSKRKISMAEFQDAVERVA 410
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
+ G ++ + ++ +K ++A HEAGH ++ P+ D ++P G+
Sbjct: 411 IGG---------PERRSRVMTDRQKLVVAYHEAGHAIVGAALPKADKVQKVTIIPRGQAG 461
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIA 535
++F P ED+++ T K ++ V+ GGR AE +VFG+ +VT G DL ++T+IA
Sbjct: 462 GYTLFLPDEDSLN--LRTVSQFKARLAVSLGGRVAEEIVFGNEEVTTGASGDLVQVTRIA 519
Query: 536 REMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRE 595
R MV G+++R+G + + + + + + ++ ++ E E
Sbjct: 520 RAMVTR--------YGMSQRLGPIVFGEKEELIFLGREISEQRNYGDEVARQIDE----E 567
Query: 596 LTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKLQGLSPVMFEDFVKPF 655
+ + E E A L N+ +L+ +A L+E + G ++EE ++ VKP
Sbjct: 568 VHAIVSEAYETAQQILLQNRAVLDDMANALIEYETLDGEQLEELIR---------RVKPL 618
Query: 656 QINLQEEGPLPHNDRLRYKP 675
++ + G N R +P
Sbjct: 619 TLDFSKSGSTTPNGRTEDRP 638
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/489 (33%), Positives = 266/489 (54%), Gaps = 52/489 (10%)
Query: 165 DTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTL 224
D + + +V + + L E++ ++ P ++ E G + +GVLL GPPGTGKTL A+ +
Sbjct: 155 DKRVTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAV 214
Query: 225 AKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRH 278
A E+G+PF SG++F + GAAR+ ++F A++NAP VF+DEIDA+ AG
Sbjct: 215 AGEAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAVGRQRGAGLG 274
Query: 279 ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDR 338
D R + T L+ ++DG FS+ + +I I ATNRPD LD +RPGR DR
Sbjct: 275 GGHDEREQ-TLNQLLVEMDG---------FSVNEGIIVIAATNRPDILDPALLRPGRFDR 324
Query: 339 RLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 398
+ +G+PD K R +I +HS K LA DV+ + L RT GF+GAD+ NL+NE+ +++ R+
Sbjct: 325 HITVGIPDIKGREEILKIHSRNKPLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARR 384
Query: 399 GHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLF 458
G +I ++ + + + V+ E++ + +S + K+L+A HEAGH V+A L
Sbjct: 385 GLKQITMAELEEAITR-------VIAGPEKRSRI---MSEKDKKLVAYHEAGHAVVAKLL 434
Query: 459 PRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD 518
P ++P G+ ++ P ED Y + + ++V GGR AE LV +
Sbjct: 435 PNTPPVHEVTIIPRGRAGGYTMLLPEEDKY---YMSKSEMMDEIVHLLGGRVAESLVL-N 490
Query: 519 DVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDG-----DLIKYR 573
D++ G ++D+E+ T IAR+MV G++ R+G + S+ DL + R
Sbjct: 491 DISTGAQNDIERATNIARKMVTE--------YGMSERLGPMTFGTKSEEVFLGRDLGRTR 542
Query: 574 WDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITG 633
+ + E++ RE+ R IEE + A + L++N L +AK L+E ++ G
Sbjct: 543 ---------NYSEEVAAEIDREIKRIIEEAYKRAESLLKENIDKLHRVAKALIEKEKLNG 593
Query: 634 LEVEEKLQG 642
E E+ G
Sbjct: 594 EEFEKVFNG 602
>sp|B8I4B9|FTSH_CLOCE ATP-dependent zinc metalloprotease FtsH OS=Clostridium
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584
/ H10) GN=ftsH PE=3 SV=1
Length = 619
Score = 251 bits (642), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 309/625 (49%), Gaps = 76/625 (12%)
Query: 36 PKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTM-KEGFPLEYVVDIPLDPYLFETIASSG 94
PK+ Y+ L ++ + V ++ D + + KE ++VV +P D ++S
Sbjct: 31 PKMSYSELLTEMKAGNVKSIGLQTDTATIELKKPKENNRTKFVVIVPPD-----VTSASE 85
Query: 95 AEVDLLQKRQIHYFLKV-------LIALLPGI-LILSLIRETVMLLHITSSRLLYKKYNQ 146
L + I F +++LP + L++ LI L++ + Q
Sbjct: 86 RFTAALDNKLIEDFHVTQPPQPPWWVSMLPTVGLVIILI-------------LIWFFFIQ 132
Query: 147 LFDMAYAENFILPVG------YVSDTKSMYKEVVLGGDV-WDLLDELMIYMGNPMQYYER 199
N ++ G V D K + E V G D + L E++ ++ P ++ E
Sbjct: 133 QSQGGGGGNRVMSFGKSRAKMTVDDKKKITFENVAGADEEKEELAEIVEFLKAPKKFVEL 192
Query: 200 GVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIA 258
G + +GVLL GPPGTGKTL A+ ++ E+G+PF SG++F + GA+R+ ++F A
Sbjct: 193 GARIPKGVLLVGPPGTGKTLLAKAVSGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQA 252
Query: 259 RRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQA 313
++NAP VF+DEIDA+ GRH R T L+ ++DG F + +
Sbjct: 253 KKNAPCIVFIDEIDAV-GRHRGAGLGGGHDEREQTLNQLLVEMDG---------FGINEG 302
Query: 314 VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELV 373
VI + ATNRPD LD +RPGR DRR+ +GLPD K R QI VHS GK LA+DV ++L
Sbjct: 303 VIILAATNRPDILDPALLRPGRFDRRVVVGLPDIKGREQILKVHSRGKPLADDVRLDDLA 362
Query: 374 FRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCE 433
T GF+GADI NL+NE+ +++ R KI ++I + K V++ E++ +
Sbjct: 363 RITPGFTGADIENLLNEAALLTARANKKKIGNEEIKEAAFK-------VMMGPEKKSRV- 414
Query: 434 QSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYT 493
+S K++ A HEAGH + L ++P G + P+E D+ Y
Sbjct: 415 --MSEHDKKVTAYHEAGHAIAIKLVSSSQKVDRVSIIPAGMAGGYTASRPQE---DKSYH 469
Query: 494 TFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLT 553
T L ++++A GGR AE + D+V+ G DL+K+ +IAR MV G++
Sbjct: 470 TRSQLIEEIIIALGGRAAEEITM-DEVSTGASSDLKKVNQIARNMVTK--------YGMS 520
Query: 554 RRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRD 613
++G + +D D + D Q + + EL+ + E+ I+ + ++ LR+
Sbjct: 521 EKLG--NMIFGNDNDEVFIGRDLAQA--RNYSDELAAIIDNEVKSIIDNAYQKTVSLLRE 576
Query: 614 NKHILEIIAKELLENSRITGLEVEE 638
N L +A+ LLE ++ G E EE
Sbjct: 577 NIVRLNKLAEVLLEKEKVEGAEFEE 601
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 279/530 (52%), Gaps = 52/530 (9%)
Query: 25 LWIAKRWWRYRP---KLPYTYFLEKL-DSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDI 80
W+A+ ++ KL YT F++ + D V + V D L V K+G Y VD
Sbjct: 20 FWLARFFYVENSPVSKLSYTSFVQMVEDERSVVSEVVIRDDGVLRVYTKDGRV--YEVDA 77
Query: 81 PL---DPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSS 137
P D L E + S G +V + +++ VL L+P IL + V+ L I S
Sbjct: 78 PWAVNDSQLIEKLVSKGIKVSGERSGSSSFWINVLGTLIPTILFI------VVWLFIMRS 131
Query: 138 RLLYKKYNQLFDMAYAENFIL-PVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQY 196
L + NQ F + + P G + + +K+V + + L E++ ++ +P ++
Sbjct: 132 --LSGRNNQAFTFTKSRATMYKPSG---NKRVTFKDVGGAEEAIEELKEVVEFLKDPSKF 186
Query: 197 YERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMF 255
G + +G+LL GPPGTGKTL AR +A E+ +PF SG++F + GAAR+ ++F
Sbjct: 187 NRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF 246
Query: 256 SIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSL 310
+ A+ +AP VF+DEIDA+ GRH R T L+ ++DG F
Sbjct: 247 AQAKAHAPCIVFIDEIDAV-GRHRGAGLGGGHDEREQTLNQLLVEMDG---------FDS 296
Query: 311 RQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFE 370
++ +I + ATNRPD LD +RPGR D+++ + PD R +I ++H+ K LAEDVN E
Sbjct: 297 KEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLE 356
Query: 371 ELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQ 430
+ RT GF GAD+ NLVNE+ +++ R+G KI +D + +D+ V+ +
Sbjct: 357 IIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDR-------VIAGPARKS 409
Query: 431 KCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFD-WHAFSQLLPGGKETAISVFYPREDTID 489
K +S ++KR++A HEAGH V++ + P + H S + G K ++ P E D
Sbjct: 410 KL---ISPKEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEE---D 463
Query: 490 QGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMV 539
+ + L ++ GGR AE +VFG DVT G +D+E+ T+IAR MV
Sbjct: 464 KYLVSRNELLDKLTALLGGRAAEEVVFG-DVTSGAANDIERATEIARNMV 512
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 302/623 (48%), Gaps = 75/623 (12%)
Query: 38 LPYTYFLEKLDSSEVAAVV-----FTEDLKRLYVTMKEGFPLE-YVVDIPL--DPYLFET 89
+PYT F ++L+++ VA V T + K+ P++ +V IP D L
Sbjct: 65 IPYTSFKQQLENNNVAEVTTQADKITGEFKQAVKVPGVDQPVKRFVTHIPAFGDDQLMSQ 124
Query: 90 IASSGAEVDLLQKRQIH-YFLKVLIALLPGILILSLIRETVMLLHITSSRLL------YK 142
+ G V++ + L +LI+ P IL L + + L K
Sbjct: 125 LDQKGVIVNVQPESSTRSLLLSILISFGPTILFFLLFLWLISKAQSSQQGLFGLGKSRAK 184
Query: 143 KYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQ 202
+YN T+ + +V + L E++ ++ NP +Y G
Sbjct: 185 RYN----------------ATESTRVTFDDVAGIEEAKQELAEIVDFLKNPQKYQRLGGT 228
Query: 203 FVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRN 261
+GVLL GPPGTGKTL AR +A E+G+PF SG+EF + GAAR+ E+F A++
Sbjct: 229 IPKGVLLIGPPGTGKTLLARAVAGEAGVPFFSMSGSEFVEMIVGVGAARVRELFQQAKKE 288
Query: 262 APAFVFVDEIDAIAGRHARK-----DPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIF 316
AP +FVDE+DAI R R T L+ ++DG F RQ VI
Sbjct: 289 APCIIFVDELDAIGRRRGSSINVGGHDEREQTLNQLLVEMDG---------FDSRQGVIV 339
Query: 317 ICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRT 376
+ ATNRPD LD +RPGR DRR+ + PD R++I VH+ L +++ E+ T
Sbjct: 340 LAATNRPDVLDPALLRPGRFDRRVVVQRPDKVGRLKILQVHTRNVPLDPNLDLSEIAAAT 399
Query: 377 VGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSV 436
G GAD+RNLVNE+ +++ R+G + + ++D D L+K L LL +
Sbjct: 400 PGLVGADLRNLVNEAALLAARRGKNYVDREDFFDALEKITLGAERKLL-----------I 448
Query: 437 SFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFG 496
S E +R +A HE+GH +L L P D ++P G+ ++ P +D + YT
Sbjct: 449 SEEDRRRVAYHESGHALLGLLLPEADPVHKVTIIPRGQALGVTYQTPEDDRYN--YTER- 505
Query: 497 YLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRV 556
YL+ ++ A GGR AE LVFG VT G ++DL+++T+IAR+MV G+++ V
Sbjct: 506 YLRSRITAALGGRAAEELVFG-TVTTGAENDLKQVTEIARQMVTR--------WGMSKEV 556
Query: 557 GLLD-RPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNK 615
GL+ PD + + +P + + + L+ + RE R I+E A++ L +
Sbjct: 557 GLVYLSPDGQE----DFLGPNP-ITSREYSESLATVIDRETRRIIDECYAEALSLLNRER 611
Query: 616 HILEIIAKELLENSRITGLEVEE 638
L+ +A+ LL + ++ E
Sbjct: 612 QRLDNLAEALLREESLDEQQIRE 634
>sp|A9BFL9|FTSH1_PETMO ATP-dependent zinc metalloprotease FtsH 1 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH1 PE=3 SV=1
Length = 653
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 319/611 (52%), Gaps = 54/611 (8%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLE-YVVDIPLDPYLFETI 90
W P + Y+ L ++ +V ++ ++ + + K+G E + + +D ++
Sbjct: 51 WENNPIISYSEMLSLINDGQVESMKINQN-GNVEILSKDGTTYESFSPALVIDKQYVNSL 109
Query: 91 ASSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDM 150
G +V+ ++ ++ +LI ++P I+++ L L+ ++S N F
Sbjct: 110 IQKGIKVEYVESVGTKWWFGLLINIIP-IVVMVLF---FFWLYRSASAGARSSMN--FGK 163
Query: 151 AYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLS 210
+ A+ + P+G K +K+V +V D +++++ ++ NP ++ E G + +G LL
Sbjct: 164 SGAKKY-EPIG----EKVTFKDVAGIDEVLDEIEDIVKFLKNPQEFQELGARMPKGTLLV 218
Query: 211 GPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARRNAPAFVFVD 269
GPPGTGKTL AR +A E+ +PF +ASG++F + GA+R+ ++F A+ NAPA +F+D
Sbjct: 219 GPPGTGKTLTARAIAGEADVPFYYASGSDFVELFVGVGASRVRDLFKTAKENAPAIIFID 278
Query: 270 EIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPD 324
E+DA+ AG D R + T AL+ +LDG F V+ + ATNRPD
Sbjct: 279 ELDAVGRQRGAGLGGGNDEREQ-TLNALLVELDG---------FDTSTGVVVMAATNRPD 328
Query: 325 ELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADI 384
LD +RPGR D+++ +G PD K R +I +H+ K++A DV+ + L RT GF GAD+
Sbjct: 329 VLDKALLRPGRFDKKIMVGPPDVKGREEILKIHTRKKKIAPDVDLKLLAKRTPGFVGADL 388
Query: 385 RNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLL 444
NLVNE+ +++ RK ++++ D + +D+ +L G K + +S ++K++L
Sbjct: 389 ENLVNEAALIASRKKKNQVEMSDFEEAIDR-VLTG---------PSKKYRIISDKEKKIL 438
Query: 445 AVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVV 504
+ HE GH VLA+L P D ++P G + S E D+ + ++VV
Sbjct: 439 SYHELGHAVLAYLLPNTDPVYKITIIPRGAGSLGSTLQIPEK--DKYLIKKSEILDRIVV 496
Query: 505 AHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDS 564
A GGR +E+LVF + T G KDDL K T A+ M+ RL G+++R+G P
Sbjct: 497 ALGGRASEKLVF-NFATTGAKDDLRKATDYAKSMIY-----RL---GMSKRMG----PVY 543
Query: 565 SDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKE 624
+G+ + + + E ++ E+ + I + A+ L+ N+ L+++A
Sbjct: 544 WEGEEEEIFLGSELTKQRNYSEETAKELDVEVKKIINSMYDKALELLKQNRERLDLLASY 603
Query: 625 LLENSRITGLE 635
+ +N I G E
Sbjct: 604 IFKNETIYGEE 614
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 248/469 (52%), Gaps = 64/469 (13%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ NPM+Y+ G + RG+LL GPPGTGKTL AR +A E+G+PF S +EF +
Sbjct: 215 LSEVVDFLRNPMKYHAIGARLPRGILLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE 274
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A+ +AP+ +FVDE+DA+ AG D R + T L+ ++
Sbjct: 275 MFVGVGASRVRDLFERAKASAPSIMFVDELDAVGRQRFAGLGGGNDEREQ-TLNQLLVEM 333
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F Q VI I ATNRPD LD +RPGR DR++ +GLPD + R I +
Sbjct: 334 DG---------FEPHQDVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDRRGREAILRI 384
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ G +A+D++ EEL T GFSGAD+ NLVNE+ +M+ RK +++ D + LDK
Sbjct: 385 HTRGIPVADDLDLEELAAATPGFSGADLANLVNEAALMAARKNKKIVERIDFDEALDKI- 443
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
VL TE E KR++A HEAGH V AH P D ++P G+
Sbjct: 444 -----VLGTERAMIMSEHD-----KRVVAYHEAGHAVAAHFSPGTDPLRKVSIVPRGQSL 493
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
+++ P ED + + YL ++ V GGR AE+LVF +++T G ++DL++ T +AR
Sbjct: 494 GVTIQAPEEDRFNY---SRAYLLARLTVMMGGRAAEKLVF-NEMTTGAQNDLKEATLLAR 549
Query: 537 EMVISPQNARLGLAGLTRRVG-----------LLDRPDSSDGDLIKYRWDDPQVIPTDMT 585
MV GL G++ VG L R D D+ + T
Sbjct: 550 RMV--------GLWGMSDEVGPVYLGMGEQHVFLGREIMQDRDV------------AEAT 589
Query: 586 LELSELFTRELTRYIEETEELAMNGLRDNKHIL--EIIAKELLENSRIT 632
LE ++ + L R E E + RD L +IA+E + +IT
Sbjct: 590 LERADEAVQRLLREAMERAEQLLRKYRDKLDALAEALIAEETIGQEKIT 638
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 275/538 (51%), Gaps = 58/538 (10%)
Query: 35 RP-KLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPY-LFETIAS 92
RP +L Y+ FL+ L+ V V + + + + E F V +P D L E +
Sbjct: 34 RPTELSYSAFLDALEDRRVQEAVVRDRVLQGKMVGGESF----TVTLPPDAAGLAERLEE 89
Query: 93 SGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAY 152
+G E R + + LLP TV+ L + + + Q
Sbjct: 90 AGVEQRYEVTRTPWW-----VTLLP----------TVLWLAVMVGLFAWAQKRQAGAFGL 134
Query: 153 AENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGP 212
A + + P+ ++ + +V +V L+E++ Y+ NP +Y G + +GVLL GP
Sbjct: 135 ARSTVKPLAP-GESPVTFADVAGMDEVKGELEEIVDYLKNPDKYRAIGARIPKGVLLYGP 193
Query: 213 PGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEI 271
PGTGKTL AR +A E+G+PF SG+ F + GA+R+ E+F+ AR+NAP VF+DEI
Sbjct: 194 PGTGKTLLARAVAGEAGVPFFALSGSSFVELFVGMGASRVRELFAQARKNAPCIVFIDEI 253
Query: 272 DAIAGRHARK-----DPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDEL 326
DA+ + R T L+ ++DG F + VI + ATNRPD L
Sbjct: 254 DAVGRQRGSAAVVGGHDEREQTLNQLLTEMDG---------FGAYEGVIVMAATNRPDVL 304
Query: 327 DLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRN 386
D +RPGR DR++ +G PDA R +I VH+ GKQL ++ + RT GF+GAD+ N
Sbjct: 305 DKALLRPGRFDRQIPVGPPDAAGREEILRVHAKGKQLDPSLDLAAVARRTPGFTGADLAN 364
Query: 387 LVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAV 446
L+NE+ I++VR+G S I +I + +D+ + G + + + E+KR +AV
Sbjct: 365 LLNEAAILAVRRGRSHITMSEIDEAIDRVVAGG---------PARKGRMIRPEEKRRVAV 415
Query: 447 HEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAH 506
HEAGH ++A L P D ++P G+ ++ P E DQ T L+ ++ +
Sbjct: 416 HEAGHALVATLTPGADPVQKVTIIPRGRAGGFTLTTPEE---DQMLYTRSELEARLKMLL 472
Query: 507 GGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDS 564
GG AE ++ G+ T G +DDL + T++AREM+ +R G+ + VGL+ PD+
Sbjct: 473 GGLAAEEVLLGERST-GAQDDLRRATQVAREMI-----SRYGMG---QSVGLMAVPDT 521
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 273/533 (51%), Gaps = 60/533 (11%)
Query: 37 KLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKE---GFPLEYVVDIPLD-PYLFETIAS 92
++ Y FLE +D+ + +V E+ + V + + L VD+P + P L +
Sbjct: 42 RMTYGRFLEYVDAGRITSVDLYENGRTAIVQVSDPEVDRTLRSRVDLPTNAPELIARLRD 101
Query: 93 SGAEVDLLQKRQ---IHYFLKVLIALLPGILILSLI---RETVMLLHITSSRLLYKKYNQ 146
S +D R + F+ LI P +LI SL R + + + + K
Sbjct: 102 SNIRLDSHPVRNNGMVWGFVGNLI--FPVLLIASLFFLFRRSSNMPGGPGQAMNFGKSKA 159
Query: 147 LFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRG 206
F M + T M+ +V + + L E++ ++ P ++ G + +G
Sbjct: 160 RFQMD------------AKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKG 207
Query: 207 VLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAF 265
VLL GPPGTGKTL A+ +A E+G+PF SG+EF + GA+R+ ++F A+ NAP
Sbjct: 208 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCL 267
Query: 266 VFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICAT 320
+F+DEIDA+ AG D R + T L+ ++DG + TGI I I AT
Sbjct: 268 IFIDEIDAVGRQRGAGIGGGNDEREQ-TLNQLLTEMDGFEGNTGI---------IIIAAT 317
Query: 321 NRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFS 380
NRPD LD +RPGR DR++ + PD R +I +VH+ K+LA +V+ + + RT GFS
Sbjct: 318 NRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFS 377
Query: 381 GADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEK 440
GAD+ NL+NE+ I++ R+ S I +I D +D+ ++ GM + V +
Sbjct: 378 GADLANLLNEAAILTARRRKSAITLLEIDDAVDR-VVAGM----------EGTPLVDSKS 426
Query: 441 KRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKM 500
KRL+A HE GH ++ L D L+P G+ ++ F P E +QG TT L
Sbjct: 427 KRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNE---EQGLTTKAQLMA 483
Query: 501 QMVVAHGGRCAERLVFGDD-VTDGGKDDLEKITKIAREMVISPQNARLGLAGL 552
++ A GGR AE VFGDD VT G DL+++T++AR+MV R G++ L
Sbjct: 484 RIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMV-----TRFGMSNL 531
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 254/467 (54%), Gaps = 42/467 (8%)
Query: 167 KSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAK 226
K + +V + L E+ ++ NP ++ + G + +G LL GPPGTGKTL AR +A
Sbjct: 185 KVTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAG 244
Query: 227 ESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHAR 280
E+G+PF SG++F + GA+R+ ++F A++N+P +FVDEIDA+ AG
Sbjct: 245 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGG 304
Query: 281 KDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRL 340
D R + T L+ ++DG F + +I + ATNRPD LD +RPGR DR++
Sbjct: 305 HDEREQ-TLNQLLVEMDG---------FDSKSGIIMLAATNRPDILDPALLRPGRFDRQI 354
Query: 341 YIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGH 400
+ PD R++I VH+ GK L EDV+ E + T GF+GAD+ NLVNE+ +++ R
Sbjct: 355 VVDRPDLPGRIKILKVHTRGKPLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNK 414
Query: 401 SKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPR 460
+I+ ++ + +D+ V+ E + + +S ++K + A HEAGH ++ L P
Sbjct: 415 EQIEMAEMEEAIDR-------VIAGPERKTRL---ISEKEKEITAYHEAGHAIVGALLPE 464
Query: 461 FDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDV 520
D ++P G+ +++ P ED + L Q+ GGR AER+VF +++
Sbjct: 465 ADPVHKVTIIPRGQALGVTMSLPEEDRF---MMSRAQLMAQLSYMLGGRAAERVVF-EEI 520
Query: 521 TDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVI 580
T G +D+E+ TK+AR+MV G++ ++GL+ DG + R D
Sbjct: 521 TTGASNDIERATKVARQMVTR--------YGMSEKLGLIAL-GQHDGQVFMGR--DLHAQ 569
Query: 581 PTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLE 627
P D + E++ +E+ R ++E + A + L N+ +LE +A +L+E
Sbjct: 570 P-DYSDEIAFQIDKEIRRLVDEAYDTAEDLLVRNRRLLEKLASDLIE 615
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 246/451 (54%), Gaps = 42/451 (9%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
++EL+ ++ NP +Y E G + +G+L+ GPPGTGKT + +A E+G+PF SG++F +
Sbjct: 177 VEELVDFLKNPKKYIELGARIPKGILMIGPPGTGKTYLTKAVAGEAGVPFFSISGSDFVE 236
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A+++AP +F+DEIDA+ AG D R + T L+ ++
Sbjct: 237 MFVGVGASRVRDLFEQAKKSAPCIIFIDEIDAVGRKRGAGLGGGHDEREQ-TLNQLLVEM 295
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F + + +I + ATNRPD LD +RPGR DR++ +G PD K R QI V
Sbjct: 296 DG---------FGINEGIIIVAATNRPDILDPALLRPGRFDRQVMVGAPDIKGREQILQV 346
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ GK L EDVN + L RT GF+ ADI NL+NE+ +++ RK KI+ + + + + K +
Sbjct: 347 HAKGKPLDEDVNLKVLARRTPGFTPADIENLMNEAALLTARKNEKKIKMETVEEAITK-V 405
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
+ G+ +K + +S ++++L A HEAGH V+A L D ++P G+
Sbjct: 406 IAGL---------EKKSRVISEKERKLTAYHEAGHAVVAKLLTHTDPVHQVTIIPRGRAG 456
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
++ P ED Y T ++ +V GGR AE+LV D++ G +DL++++ IAR
Sbjct: 457 GFTMTLPTEDKY---YVTKTEMQEHIVHLLGGRVAEKLVL-HDISTGASNDLQRVSSIAR 512
Query: 537 EMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTREL 596
MV G++ ++G + D + + ++ E+ + E+
Sbjct: 513 AMVTQ--------YGMSDKLGSMTFGDGDSEVFLGRDFTSKHNYSEEVAAEIDQ----EI 560
Query: 597 TRYIEETEELAMNGLRDNKHILEIIAKELLE 627
+++EE L L +N L +IA+ LL+
Sbjct: 561 RKFVEEAYMLTEKLLTENMDKLHVIAQALLK 591
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 257/476 (53%), Gaps = 45/476 (9%)
Query: 185 ELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS- 243
E++ ++ P ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 228 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 287
Query: 244 EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDG 298
GA+R+ ++F A+ NAP VFVDEIDA+ GR + R T L+ ++DG
Sbjct: 288 VGVGASRVRDLFKKAKENAPCIVFVDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEMDG 346
Query: 299 DKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHS 358
+ TGI I I ATNR D LD +RPGR DR++ + +PD + R +I VH
Sbjct: 347 FEGNTGI---------IVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHG 397
Query: 359 AGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLE 418
+ K+ DV+ E + RT GFSGAD+ NL+NE+ I++ R+G + I ++I D +D+ ++
Sbjct: 398 SNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDR-IVA 456
Query: 419 GM-GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA 477
GM G ++T+ + K L+A HE GH + L P D L+P G+
Sbjct: 457 GMEGTVMTDGKS-----------KSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQARG 505
Query: 478 ISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAR 536
++ F P +D + L ++V GGR AE ++FG+ +VT G DL++IT +A+
Sbjct: 506 LTWFIPMDDPT---LISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAK 562
Query: 537 EMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTREL 596
+MV++ + +G L+D S GD+I + M+ +L+E +
Sbjct: 563 QMVVTFGMSDIG------PWSLMDSGAQS-GDVIMR-----MMARNSMSEKLAEDIDTAV 610
Query: 597 TRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKLQGLSPVMFEDFV 652
R +E E+A++ +R N+ ++ I + LLE ++G E L + + E+ V
Sbjct: 611 KRLSDEAYEIALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVENRV 666
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 217/381 (56%), Gaps = 39/381 (10%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L +++ ++ NP +Y+ G + RGVLL GPPGTGKTL AR +A E+G+PF S +EF +
Sbjct: 263 LAQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE 322
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A+ AP+ +F+DE+DA+ AG D R + T L+ ++
Sbjct: 323 MFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLGVGNDEREQ-TLNQLLVEM 381
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F V+ I ATNRPD LD +RPGR DR++ +GLPD + R I +
Sbjct: 382 DG---------FEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPDKRGRAAILRI 432
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ G +A DV+ E L T GFSGAD+ NLVNE+ +++ R+G + + D + LDK L
Sbjct: 433 HTRGIPIAPDVDLEGLAAATPGFSGADLANLVNEAALVAARRGKQVVDRSDFEEALDKML 492
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
L LL +S E++RL+A HEAGH V+A+ P D ++P G+
Sbjct: 493 LGTTRSLL-----------MSQEERRLVAYHEAGHAVVAYFTPGADPLRKISIVPRGRAL 541
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
++V P ED + T L ++ V GGR AE+LVF +VT G ++DL++ T++AR
Sbjct: 542 GVTVQAPEEDRFN---YTRNQLLGRLAVLLGGRAAEQLVF-HEVTTGAQNDLKEATQLAR 597
Query: 537 EMVISPQNARLGLAGLTRRVG 557
MV GL G++ +G
Sbjct: 598 RMV--------GLWGMSEELG 610
>sp|D5HA94|FTSH2_SALRM ATP-dependent zinc metalloprotease FtsH 2 OS=Salinibacter ruber
(strain M8) GN=ftsH2 PE=3 SV=1
Length = 683
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 315/636 (49%), Gaps = 75/636 (11%)
Query: 24 ALWIAKRWWRYRP---KLPYTYF-----LEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLE 75
ALW W ++ Y+ F E ++ EV LK ++G +E
Sbjct: 40 ALWAYSYWGMGASGGERISYSEFRTQLQQENVERVEVKGNAINGSLKSQATRSEQGNTIE 99
Query: 76 YVVDIPLDPYLFETIASSGAE--VDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLH 133
Y + P S G E +DLL+ + ++ K + G++I+ L+ V+LL
Sbjct: 100 YQNFVTYLP-------SFGDEQLMDLLESQGVNVVTKPESSFPWGLVIMGLL--PVLLLF 150
Query: 134 ITSSRLLYKKYNQ---LFDMAYAENFILPVGYVSDTKSMYKEVVLGGD-VWDLLDELMIY 189
L + +Q LF + ++ + Y D + + V G D + L E++ +
Sbjct: 151 GVGYIFLRRMQSQGQGLFSVRQSKAEL----YDKDEEDTTFDDVAGADSAKEELREIIKF 206
Query: 190 MGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGA 248
+ NP ++ G + +GVLL GPPGTGKTL AR +A E+ PF SG++F + GA
Sbjct: 207 LKNPKRFEGLGGKVPKGVLLVGPPGTGKTLLARAVAGEANAPFFSVSGSDFMEMFVGVGA 266
Query: 249 ARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERT 303
+R+ +MFS A+ +PA +F+DE+D+I AG D R + T L+++LDG
Sbjct: 267 SRVRDMFSEAKETSPAIIFIDELDSIGRKRGAGLGGGNDEREQ-TLNQLLSELDG----- 320
Query: 304 GIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQL 363
F + VI + ATNRPD LD RPGR DR++ + LP + R +I +H+ K L
Sbjct: 321 ----FEENEGVIVMAATNRPDILDSALTRPGRFDRQITVDLPTKQSRHEILKIHAREKPL 376
Query: 364 AEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL--LEGMG 421
++DV+ EE+ T GFSGAD+ NL+NE+ +++ R GH IQ DI DK + L+ G
Sbjct: 377 SDDVDLEEIARSTPGFSGADLENLLNEAALLAGRHGHDAIQYSDIEQARDKVMMGLKRDG 436
Query: 422 VLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVF 481
++L +EE K+LLA HEAGH ++ + P D ++P GK ++
Sbjct: 437 MVLDDEE------------KKLLAYHEAGHAIVGAVLPNADPVHKVTIVPRGKAMGVTQQ 484
Query: 482 YPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVIS 541
P + DQ Y+ ++ V GGR AE L+F D T G ++DL+++ K+AR+MV+
Sbjct: 485 LPEK---DQYLYRHDYILDRLAVIMGGRAAEELIF-DTATSGAENDLKQVRKMARKMVLD 540
Query: 542 PQNARLGLAGLTRRVGL-LDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYI 600
G+ + + L D+ + GD I + D E+ E E+ R
Sbjct: 541 -----WGMGDQFKHISLGEDQGNVFLGDEIAK----GREYSDDTAREVDE----EIRRIS 587
Query: 601 EETEELAMNGLRDNKHILEIIAKELLENSRITGLEV 636
E+ + A++ L ++ + +A L+E ++G +V
Sbjct: 588 EDAFQRAVDTLNEHHEAFDQLADMLIEQEEVSGKDV 623
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 182/617 (29%), Positives = 304/617 (49%), Gaps = 58/617 (9%)
Query: 37 KLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAE 96
++ Y+ FL+K+D++E+ V + K T Y P DP L + + ++
Sbjct: 36 EVSYSEFLQKIDNNELKTVTI-QGQKLTGQTADRRMISTYA---PRDPGLVQRLNTNKVN 91
Query: 97 VDLLQKRQIHY-FLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAEN 155
+ + + + FL +L +LLP ++I+ + + S L F + A+
Sbjct: 92 IRAVPESSGNSIFLNLLFSLLPVLIIVGAWIFFMRQMQGGSRGALG------FGKSKAKL 145
Query: 156 FILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGT 215
G V+ +K+V + L E++ ++ P ++ G + RGVLL GPPGT
Sbjct: 146 LTEAQGRVT-----FKDVAGVEEAKQDLQEIVDFLREPQKFQRLGGRIPRGVLLVGPPGT 200
Query: 216 GKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI 274
GKTL AR++A E+ +PF SG++F + GA+R+ +MF A++NAP +F+DEIDA+
Sbjct: 201 GKTLLARSIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAV 260
Query: 275 AGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLE 329
GRH + R T L+ ++DG F +++I I ATNRPD LD
Sbjct: 261 -GRHRGAGLGGGNDEREQTLNQLLVEMDG---------FEPNESIILIAATNRPDVLDPA 310
Query: 330 FVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVN 389
+RPGR DR++ + PD R +I +VH LA +VN L T GFSGAD+ NLVN
Sbjct: 311 LLRPGRFDRQVVVPNPDVAGREKILEVHVRNVPLAPNVNLRVLARGTPGFSGADLMNLVN 370
Query: 390 ESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEA 449
E+ +M+ + + Q+ D DK + MG ++ +++ E+K L A HEA
Sbjct: 371 EAALMAASRNKKVVTMQEFEDAKDKVM---MGA-------ERRSTAMTQEEKELTAYHEA 420
Query: 450 GHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGR 509
GH ++A P D + ++P G+ + + P D Y ++ ++ + GGR
Sbjct: 421 GHAIVALNVPVSDPVHKATIVPRGRALGMVMQLPEGDRYSMSYL---WMVSRLAIMMGGR 477
Query: 510 CAERLVFG-DDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGD 568
AE L FG +++T G D+E+ TK+AR M+ R G + + +G + D+ D
Sbjct: 478 VAEELKFGKENITSGAASDIEQATKLARAMIT-----RWGFSDM---LGHVAYGDNQDEI 529
Query: 569 LIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLEN 628
+ + Q +++ E + + E+ R I++ + A L+ +A+ LLE
Sbjct: 530 FLGHSVARTQ----NISEETARMIDAEVRRLIDDAYKTATKILKTQNKQWLALAQGLLEY 585
Query: 629 SRITGLEVEEKLQGLSP 645
+TG E+ E + G P
Sbjct: 586 ETLTGTEINEVIAGKPP 602
>sp|D1C2C6|FTSH2_SPHTD ATP-dependent zinc metalloprotease FtsH 2 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH2 PE=3
SV=1
Length = 652
Score = 238 bits (608), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 246/463 (53%), Gaps = 52/463 (11%)
Query: 178 DVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASG 237
+V D++D Y+ +P ++ G + RGVLL+GPPGTGKTL R LA E+ F SG
Sbjct: 171 EVADIVD----YLRDPERFRRLGARIPRGVLLTGPPGTGKTLLTRALAGEARASFFSVSG 226
Query: 238 AEFTD-SEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRR--ATFEALIA 294
+EF + GA+R+ E+F A+ NAPA +F+DEIDAI R R + T ++
Sbjct: 227 SEFVELYVGVGASRVRELFRKAKENAPAIIFIDEIDAIGRRRGRMEQSSEYDQTLNQILV 286
Query: 295 QLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIF 354
++DG +ERT V+ + ATNR D LD +RPGR DR++ + LPD K R I
Sbjct: 287 EMDGFEERT---------TVVVVAATNRVDILDPALLRPGRFDRKVVVDLPDRKARRAIL 337
Query: 355 DVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 414
+VH+ GK LAE+VN +EL RT G +GAD+ N++NE+ I++ R I QD+++ LD+
Sbjct: 338 EVHARGKPLAENVNLDELAARTTGMTGADLANVINEAAILAARDRRETITNQDLLEALDR 397
Query: 415 QLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGK 474
L + + S ++R++A HEAGH V+AHL P D ++ G+
Sbjct: 398 TL----------AGPARNARRFSERERRVVAYHEAGHAVVAHLLPHADPVRKVSIVSRGR 447
Query: 475 ETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKI 534
++ P E D+G T L ++ GG AE L+FG D+T G +DLE+ T I
Sbjct: 448 AGGYTMIVPDE---DRGLWTRAQLSDRLAALLGGLAAEELIFG-DITTGSSNDLEQTTAI 503
Query: 535 AREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTR 594
A MV G+ +R GLL SD + PQ + T E +
Sbjct: 504 ATSMVQR--------YGMGKRFGLLSTGAGSD-----LQQLSPQ---SAYTAE------Q 541
Query: 595 ELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVE 637
E +++ ++A++ LR + LE +A+ LLE I G E+E
Sbjct: 542 EALELVQQAHQVALDVLRAHADDLERVAQRLLEVETIDGEELE 584
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi
(strain NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 238 bits (608), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 258/482 (53%), Gaps = 42/482 (8%)
Query: 167 KSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAK 226
K +K+V + L+E++ ++ P +Y + G + +G+LL GPPGTGKTL A+ +A
Sbjct: 164 KVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIPKGILLVGPPGTGKTLLAKAVAG 223
Query: 227 ESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHAR 280
E+G+PF SG++F + GA+R+ ++F A++N+P +F+DEIDA+ AG
Sbjct: 224 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIIFIDEIDAVGRQRGAGLGGG 283
Query: 281 KDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRL 340
D R + T L+ ++DG F + + +I + ATNRPD LD +RPGR DR++
Sbjct: 284 HDEREQ-TLNQLLVEMDG---------FGVNEGIILVAATNRPDILDKALLRPGRFDRQI 333
Query: 341 YIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGH 400
+G PDAK R ++ VH K+L++DV+ + L RT GF GAD+ NL+NE+ +++VR
Sbjct: 334 LVGAPDAKGREEVLKVHVRNKRLSDDVDLKVLAKRTPGFVGADLENLMNEAALLAVRANK 393
Query: 401 SKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPR 460
+I +++ + + + V+ E++ + + E +++ A HEAGH ++ P
Sbjct: 394 KQIGMEELEEAITR-------VIAGPEKKSRV---IHEEDRKITAYHEAGHAIVMKFSPH 443
Query: 461 FDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDV 520
D ++P G ++ P DT Y + LK +MV GGR AE+++ G D+
Sbjct: 444 SDPVHEISIIPRGMAGGYTMHLPERDT---SYMSKSKLKDEMVGLLGGRVAEQIIIG-DI 499
Query: 521 TDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVI 580
+ G +D+++++ IAR+MV+ G++ ++G + D I +
Sbjct: 500 STGASNDIQRVSNIARKMVME--------YGMSEKLGTITFGSDHDEVFIGREIGKSKNY 551
Query: 581 PTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKL 640
++ E+ E+ ++E + A L ++ L +AK LL+ ++TG E +
Sbjct: 552 SEEVAFEID----NEVKALVDEAYKKAEKILTEHIDKLHAVAKVLLDKEKVTGEEFNAIV 607
Query: 641 QG 642
+G
Sbjct: 608 EG 609
>sp|B7T1V0|FTSH_VAULI ATP-dependent zinc metalloprotease FtsH OS=Vaucheria litorea
GN=ftsH PE=3 SV=1
Length = 644
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 249/461 (54%), Gaps = 46/461 (9%)
Query: 189 YMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKS-G 247
++ P ++ G + +GV+L GPPGTGKTL A+ +A E+G+PF+ SG+EF + G
Sbjct: 193 FLRKPQRFLSVGAKIPKGVILIGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIG 252
Query: 248 AARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKER 302
A+R+ ++F A++NAP VF+DEIDA+ AG D R + T ++ ++DG KE
Sbjct: 253 ASRVRDLFKTAQQNAPCIVFIDEIDAVGRQRGAGIGGGNDEREQ-TLNQILTEMDGFKEN 311
Query: 303 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQ 362
TGI I I ATNR D LD +RPGR DR++ I LPD K R++I VH+ K+
Sbjct: 312 TGI---------IVIAATNRVDVLDGALLRPGRFDRQVSINLPDIKGRLEILKVHAKNKK 362
Query: 363 LAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGM-G 421
L +++ + RT GFSGAD+ NL+NES I++ R+ I ++ +D+ LL G+ G
Sbjct: 363 LDSNISLGLIAQRTPGFSGADLANLLNESAILTARRNKFAITMSEVNTAIDR-LLAGLEG 421
Query: 422 VLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVF 481
LT+ + KRL+A HE GH V+ L D L+P G+ ++ F
Sbjct: 422 TSLTDTKN-----------KRLIAYHEIGHAVIGTLLKYHDEVQKVTLIPRGQARGLTWF 470
Query: 482 YPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMVI 540
P + +Q + G L +++ GGR AE +VFG ++T G +DL++IT + R+MV
Sbjct: 471 IPND---EQALISRGQLVARIIGTLGGRAAEEVVFGSSEITTGASNDLQQITNLTRQMV- 526
Query: 541 SPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYI 600
RLG++ VG P S D ++ + + + ++ ++ I
Sbjct: 527 ----TRLGMS----TVG----PISLDANVEQVFIGRGIKNNNEFSASVANKIDDQVKIII 574
Query: 601 EETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKLQ 641
+ + A+N ++ N+ +++ + L++ I+G + E++
Sbjct: 575 KHCYDQAVNIIKQNRFLIDQLVNTLIQEETISGNDFREQIN 615
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 246/459 (53%), Gaps = 46/459 (10%)
Query: 185 ELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS- 243
E++ ++ P ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 241 EVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 300
Query: 244 EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDG 298
GA+R+ ++F A+ NAP VFVDEIDA+ GR + R T L+ ++DG
Sbjct: 301 VGVGASRVRDLFKKAKENAPCIVFVDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEMDG 359
Query: 299 DKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHS 358
+ TG VI + ATNR D LD +RPGR DR++ + +PD K R I VH+
Sbjct: 360 FEGNTG---------VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHA 410
Query: 359 AGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLE 418
K+ DV+ E + RT GFSGAD+ NL+NE+ I++ R+ + I ++I D +D+ ++
Sbjct: 411 GNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDR-IVA 469
Query: 419 GM-GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA 477
GM G ++T+ + K L+A HE GH V L P D L+P G+
Sbjct: 470 GMEGTVMTDGKS-----------KSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARG 518
Query: 478 ISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAR 536
++ F P +D + L ++V GGR AE ++FGD +VT G DL++IT +AR
Sbjct: 519 LTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLAR 575
Query: 537 EMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTREL 596
+MV + G++ +G DSS + R + M+ +L+E +
Sbjct: 576 QMVTT-----FGMS----DIGPWSLMDSSAQSDVIMRM----MARNSMSEKLAEDIDSAV 622
Query: 597 TRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLE 635
+ + E+A++ +++N+ ++ + + LLE I G E
Sbjct: 623 KKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDE 661
>sp|C7M0M0|FTSH_ACIFD ATP-dependent zinc metalloprotease FtsH OS=Acidimicrobium
ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882
/ ICP) GN=ftsH PE=3 SV=1
Length = 660
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 188/627 (29%), Positives = 298/627 (47%), Gaps = 99/627 (15%)
Query: 38 LPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAEV 97
L Y+ F+ + + +V V ++ ++ G Y V PL PY + +E+
Sbjct: 52 LGYSTFIHDVQAKQVRTAVLNNTTGQITGSLTNG--TAYSVTGPL-PY-------TSSEL 101
Query: 98 DLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAENFI 157
L K + + + PG I S I E V+ I +Y + N I
Sbjct: 102 STLSKAHVQ-----VSYITPGPGIASTIIEYVIFFGIFIGIWVYLTRRTQGSV----NGI 152
Query: 158 LPVG------YVSD-TKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLS 210
+ VG Y ++ K+ + +V V + E++ ++ +P ++ + G + +G+LL
Sbjct: 153 MSVGRSRAKTYTTERPKTTFDDVAGYQGVKGEVKEVVDFLRDPSRFSQLGARIPKGILLV 212
Query: 211 GPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVD 269
GPPGTGKTL AR +A E+G+PF+ SG++F + GAAR+ ++F ARR +P+ +F+D
Sbjct: 213 GPPGTGKTLLARAVAGEAGVPFMSVSGSDFMEMFVGVGAARVRDLFQTARRQSPSIIFID 272
Query: 270 EIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDE 325
EID+I + R T +++++DG F + ++ + ATNRPD
Sbjct: 273 EIDSIGRKRGTGLGGGHDEREQTLNQMLSEMDG---------FDPAEGIVVMAATNRPDI 323
Query: 326 LDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIR 385
LD +RPGR DR++ + LPD +R+ I VH+ GK+LA DV+ E + T G SGAD+
Sbjct: 324 LDPALLRPGRFDRQIVVPLPDLPERLAILQVHTRGKRLAPDVDLEVMAKGTPGMSGADLA 383
Query: 386 NLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLA 445
NLVNE+ + +VR+G + I D D+ + MG Q++ +S E+K +A
Sbjct: 384 NLVNEAALNAVRRGATDIAMADFDSARDRII---MG-------QRREATILSDEEKERVA 433
Query: 446 VHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISV--------FYPREDTIDQGYTTFGY 497
HE GH VLA++ D +LP G ++ YPRE Y
Sbjct: 434 FHEGGHAVLAYVLDYSDPVHKVTILPTGMALGVTQQLPERDRHLYPRE-----------Y 482
Query: 498 LKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVG 557
++ +VV GGR AE LV+G D++ G +DL+ T++AR MV R G
Sbjct: 483 IEDTLVVRMGGRVAELLVYG-DLSTGAANDLQGNTELARRMV--------------REWG 527
Query: 558 LLDRPDSSDGDLIKYRWDDPQVI--------PTDMTLELSELFTRELTRYIEETEELAMN 609
+ +R L W V+ + + + L E+ R + E EE A
Sbjct: 528 MSER-------LGPMAWGSQNVVFLGEDLLHSAEYSDRTARLVDEEVERILREQEERATE 580
Query: 610 GLRDNKHILEIIAKELLENSRITGLEV 636
LR + L +A LLE I+G EV
Sbjct: 581 LLRQHLPGLIAVAHALLERETISGEEV 607
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 250/484 (51%), Gaps = 43/484 (8%)
Query: 165 DTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTL 224
DT +K++ + +E++ ++ P +Y G + +G+LL GPPGTGKTL A+ +
Sbjct: 180 DTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAI 239
Query: 225 AKESGLPFVFASGAEFTDSEKS-GAARINEMFSIARRNAPAFVFVDEIDAI-----AGRH 278
A E+ +PF +G+EF + GAAR+ ++F A NAP VF+DEIDA+ AG
Sbjct: 240 ANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVG 299
Query: 279 ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDR 338
D R + T L+ ++DG KE G VI + ATNR D LD +RPGR DR
Sbjct: 300 GGNDEREQ-TLNQLLTEMDGFKENKG---------VIVVGATNRADILDAALLRPGRFDR 349
Query: 339 RLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 398
++ + LPD RV I VH+ K L EDV+ +L RT GFSGAD+ NL+NE+ I++ R
Sbjct: 350 QVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRY 409
Query: 399 GHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLF 458
S I + ++ + D+ ++ G+ E+ + KRL+A HE GH + +
Sbjct: 410 KKSSITKNEVNEAADR-IIGGIAGAPMEDTKN----------KRLIAYHEVGHAITGSVL 458
Query: 459 PRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD 518
D L P G ++ F P E DQ + L +++ GGR AE+++FG+
Sbjct: 459 KSHDEVEKITLTPRGGAKGLTWFTPEE---DQSLLSRSALLARIITTLGGRAAEQVIFGE 515
Query: 519 -DVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDP 577
+VT G DL+++T +AR+MV R G++ +G L D S G +
Sbjct: 516 PEVTTGASSDLQQVTNLARQMV-----TRFGMS----NIGPLALEDESTGQVF---LGGN 563
Query: 578 QVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVE 637
++ +++ E+ + I E A+ + DN+ ++++I ++LL+ + G E
Sbjct: 564 MASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFR 623
Query: 638 EKLQ 641
E L
Sbjct: 624 ELLS 627
>sp|C0ZPK5|FTSH_RHOE4 ATP-dependent zinc metalloprotease FtsH OS=Rhodococcus erythropolis
(strain PR4 / NBRC 100887) GN=ftsH PE=3 SV=1
Length = 854
Score = 235 bits (600), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 282/582 (48%), Gaps = 67/582 (11%)
Query: 86 LFETIASSGAEVDLLQKRQIHYFLKVLIALLP-----GILILSLIRETVMLLHITSSRLL 140
+F+ + +GA+ Q + +L+ +LP GI + R
Sbjct: 91 IFDKVEGAGADKFNTTVTQESWLTSILLFVLPMIILFGIFFFVMNRMQGGGGRGGVMGFG 150
Query: 141 YKKYNQLF-DMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYER 199
K QL DM K+ + +V + + L E+ ++ NP +Y
Sbjct: 151 KSKAKQLTKDMP---------------KTTFADVAGADEAVEELYEIKDFLQNPARYQAL 195
Query: 200 GVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIA 258
G + RGVLL GPPGTGKTL AR +A E+G+PF SG++F + GA+R+ +MF A
Sbjct: 196 GAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQA 255
Query: 259 RRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQA 313
++N+P +FVDEIDA+ AG D R T L+ ++DG +RTGI
Sbjct: 256 KQNSPCIIFVDEIDAVGRQRGAGLGGGHD-EREQTLNQLLVEMDGFGDRTGI-------- 306
Query: 314 VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELV 373
I I ATNRPD LD +RPGR DR++ +G PD R I VHS GK + + + E L
Sbjct: 307 -ILIAATNRPDILDPALLRPGRFDRQIPVGAPDLAGRRAILRVHSQGKPIDPNADLEGLA 365
Query: 374 FRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCE 433
RTVG SGAD+ N++NE+ +++ R+ + I + + + +D+ ++ G ++
Sbjct: 366 KRTVGMSGADLANVINEAALLTARENGTVITEASLEESVDR-VVGG---------PRRKS 415
Query: 434 QSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYT 493
+ +S +K++ A HE GH + A P + +L G+ ++ P + D+G
Sbjct: 416 RIISEHEKKITAYHEGGHTLAAWAMPDIEPVYKVTILARGRTGGHAMTVPED---DKGLM 472
Query: 494 TFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLT 553
T + ++V+A GGR AE LVF + T G D++ TKIAR MV G++
Sbjct: 473 TRSEMIARLVMAMGGRAAEELVFHEPTT-GASSDIDMATKIARAMVTE--------YGMS 523
Query: 554 RRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRD 613
++G + R GD R + +D + E++ E+ IE A L +
Sbjct: 524 AKLGAV-RYGQEGGDPFLGR---SMGVQSDYSHEIAREIDEEVRNLIEAAHTEAWAILNE 579
Query: 614 NKHILEIIAKELLENSRITGLEVEEKLQGLSP----VMFEDF 651
+ L++IA ELLE +T ++E+ L G+ F DF
Sbjct: 580 YRDALDLIATELLERETLTRKDLEKILAGVEKRPRITAFNDF 621
>sp|D0MGU8|FTSH_RHOM4 ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=ftsH PE=3 SV=1
Length = 697
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 184/635 (28%), Positives = 312/635 (49%), Gaps = 78/635 (12%)
Query: 58 TEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLP 117
T +L R + T K P ++ + L Y A V + + ++F +L + P
Sbjct: 112 TPELIRRFTTTK---PADHDLTSFLLAYNERARAEGRPTVQFTARIEENWFGGLLTWIFP 168
Query: 118 GILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGG 177
ILI++L V LL S +Q+ ++ +N + + D + +K+V
Sbjct: 169 LILIVAL---WVFLLRRMSPS------SQVLNIG--KNRAILYDAMGDHRVTFKDVAGLD 217
Query: 178 DVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASG 237
+ + + E++ ++ NP ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG
Sbjct: 218 EAKEEVAEIVEFLKNPKKFTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISG 277
Query: 238 AEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHAR-----KDPRRRATFEA 291
++F + GAAR+ ++F A+ AP +F+DEIDAI R + R T
Sbjct: 278 SDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGRGIMMGANDERENTLNQ 337
Query: 292 LIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRV 351
L+ ++DG F+ + VI + ATNRPD LD +RPGR DR++ I PD ++R+
Sbjct: 338 LLVEMDG---------FNTDKGVIIMAATNRPDVLDPALLRPGRFDRQILIDKPDRRERL 388
Query: 352 QIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDV 411
+IF VH+ L +DV+ E L +T GF+GA+I N+ NE+ +++ RKG ++ +D
Sbjct: 389 EIFKVHTRDLILGDDVDLEVLAGQTPGFAGAEIANVCNEAALLAARKGKEAVEMEDFEQA 448
Query: 412 LDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLP 471
+D+ ++ G+ +K + +S E++ ++A HEAGH ++ D ++P
Sbjct: 449 IDR-VIAGL---------EKKNKIISPEEREIVAYHEAGHAIVGWFLRYTDPVVKVSIVP 498
Query: 472 GG-KETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEK 530
G + + P E + YT L +M +A GGR AE LVFG ++ G ++DLE+
Sbjct: 499 RGLAALGYAQYLPEERYL---YTKEALLD-RMTMAIGGRVAEELVFG-RISTGAQNDLER 553
Query: 531 ITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSE 590
IT++A MV+ G++ RVG + S ++ + + E +
Sbjct: 554 ITRMAYAMVVD--------YGMSERVGYVSFNLSG-------QYGEQAFFDKPYSEETAR 598
Query: 591 LFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKLQGLSPVMFED 650
L E+ R I E E A L + + LE +A+ LLE + ++ ++ L P + D
Sbjct: 599 LIDEEVRRIINEVRERARRILEEKRDKLEALARRLLEKEVLGPRDL---VEILGPRPYGD 655
Query: 651 FVKPFQINLQE---------------EGPLPHNDR 670
+ P +++E E P P +R
Sbjct: 656 YPSPNGKDVEELKDLQKGEPTSSSAVEAPAPQTER 690
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 178/631 (28%), Positives = 304/631 (48%), Gaps = 80/631 (12%)
Query: 33 RYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPY-LFETIA 91
+ ++ Y+ L+ +D+ ++ + ++ V K V+ P++ L +
Sbjct: 29 KSSSEISYSQLLKDVDAGKIKSA----EIAGQTVLAKTADNKTLTVNAPMNSEELVNRMV 84
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALLPGILILS----LIRET------VMLLHITSSRLLY 141
+ A+V K FL +L+ LLP +L++ L+R+ M + +RLL
Sbjct: 85 AKNADVKF--KSGSISFLAILVQLLPILLVVGVWLFLMRQMQGGAKGAMGFGKSKARLLT 142
Query: 142 KKYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGV 201
+ N++ +++V + + L E++ ++ +P ++ G
Sbjct: 143 ENKNRI---------------------TFEDVAGVDEAKEELQEVVDFLKDPAKFQRLGG 181
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARR 260
+ +G LL GPPGTGKTL AR +A E+G+PF SG++F + GA+R+ +MF A++
Sbjct: 182 KIPKGALLVGPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKK 241
Query: 261 NAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
NAP +F+DEIDA+ GRH + R T L+ ++DG F + +I
Sbjct: 242 NAPCIIFIDEIDAV-GRHRGAGLGGGNDEREQTLNQLLVEMDG---------FEANEGII 291
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
I ATNRPD LD +RPGR DR++ + PD R +I VH LA DV+ + L
Sbjct: 292 LIAATNRPDVLDPALLRPGRFDRQVVVPNPDVAGREKIIRVHMKNVPLAADVDVKTLARG 351
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GFSGAD+ NLVNE+ +M+ RK + QD DK + MG ++ +
Sbjct: 352 TPGFSGADLANLVNEAALMAARKNRRMVTMQDFEQAKDKVM---MGA-------ERRSMA 401
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
++ E+K+L A HE GH ++A P D + ++P G+ + + P D Y
Sbjct: 402 MNEEEKKLTAYHEGGHAIVALNVPLADPVHKATIVPRGRALGMVMQLPEGDRYSMKYQ-- 459
Query: 496 GYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTR 554
+ ++ + GGR AE ++FG +++T G D++ T +AR MV R G + +
Sbjct: 460 -QMTSRLAIMMGGRVAEEIIFGKENITSGASSDIKAATDLARNMV-----TRWGYSDI-- 511
Query: 555 RVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDN 614
+G + D+ D + + Q +++ E + L E+ R ++ + A L D
Sbjct: 512 -LGTVAYGDNQDEVFLGHSVARTQ----NVSEETARLIDSEVKRLVQYGLDEARRILTDK 566
Query: 615 KHILEIIAKELLENSRITGLEVEEKLQGLSP 645
L + K LLE ++G E+ + L+G+ P
Sbjct: 567 IDDLHTLGKALLEYETLSGEEIADILKGIPP 597
>sp|B2UMY1|FTSH_AKKM8 ATP-dependent zinc metalloprotease FtsH OS=Akkermansia muciniphila
(strain ATCC BAA-835) GN=ftsH PE=3 SV=1
Length = 812
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 281/546 (51%), Gaps = 52/546 (9%)
Query: 102 KRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAENFILPVG 161
KR+ + +L+ LLP +LIL V+L + ++ + F + A I P
Sbjct: 235 KRESGSWGGILLNLLPIVLIL------VILFFMFRAQSGGARGAMSFGKSRA-RLISP-- 285
Query: 162 YVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFA 221
K +K+V + + + EL+ ++ NP ++ + G RGVL+ G PGTGKTL A
Sbjct: 286 --DKNKVTFKDVAGISEAKEEVWELVEFLRNPEKFRDLGATIPRGVLMVGAPGTGKTLLA 343
Query: 222 RTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-- 278
R +A ES F SG++F + GA+R+ +MF A+R AP+ +F+DEIDA+ GR
Sbjct: 344 RAIAGESNASFYSISGSDFVEMFVGVGASRVRDMFEQAKRTAPSLIFIDEIDAV-GRQRG 402
Query: 279 ---ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGR 335
+ R T AL+ ++DG F VI I ATNR D LD +RPGR
Sbjct: 403 YGMGGGNDEREQTLNALLVEMDG---------FENNSNVIVIAATNRADILDPALLRPGR 453
Query: 336 IDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMS 395
DR++ + LPD + R QI VH+ ++A V+FE + T GFSGA + NLVNE+ +++
Sbjct: 454 FDRQVVVNLPDVRGREQILQVHARKVKMAPGVSFERIARGTSGFSGAQLANLVNEAALLA 513
Query: 396 VRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLA 455
RKG +I + ++ + DK +++ +++ +R+ AVHEAGH +
Sbjct: 514 ARKGLKEITEAELEEARDK----------VSWGRERRSLAINERGRRITAVHEAGHAICL 563
Query: 456 HLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLV 515
P + ++P G ++++ P +D + Q + + Q+VVA GGRCAE++V
Sbjct: 564 LKTPHSEPLHRVTIVPRGGALGMTMWLPSDDKMHQLRSE---MLDQLVVAMGGRCAEQIV 620
Query: 516 FGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWD 575
FG DVT G D++ T +AR MV G++ ++GL++ + G++ Y
Sbjct: 621 FG-DVTSGATGDIKSATNLARRMVCE--------FGMSEKLGLIEYGEHQ-GEV--YIAR 668
Query: 576 DPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLE 635
D + + +EL E+ ++ E AM L +N+ L+I+ + L+E + G +
Sbjct: 669 DLGTRSRNYSESTAELIDSEVRFLVDSAYERAMAILTENRDKLDILTEALMEFETLEGSQ 728
Query: 636 VEEKLQ 641
V + L+
Sbjct: 729 VMDILE 734
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 247/459 (53%), Gaps = 46/459 (10%)
Query: 185 ELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS- 243
E++ ++ P ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 234 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 293
Query: 244 EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDG 298
GA+R+ ++F A+ NAP VFVDEIDA+ GR + R T L+ ++DG
Sbjct: 294 VGVGASRVRDLFKKAKENAPCIVFVDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEMDG 352
Query: 299 DKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHS 358
+ TG VI + ATNR D LD +RPGR DR++ + +PD K R I VHS
Sbjct: 353 FEGNTG---------VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHS 403
Query: 359 AGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLE 418
K+ V+ E + RT GFSGAD+ NL+NE+ I++ R+G + I ++I D +D+ ++
Sbjct: 404 GNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDR-IVA 462
Query: 419 GM-GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA 477
GM G ++T+ + K L+A HE GH + L P D L+P G+
Sbjct: 463 GMEGTVMTDGKS-----------KSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARG 511
Query: 478 ISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAR 536
++ F P +D + L ++V GGR AE ++FG+ +VT G DL++IT +A+
Sbjct: 512 LTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAK 568
Query: 537 EMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTREL 596
+MV + G++ +G DSS+ + R + M+ +L+ +
Sbjct: 569 QMVTT-----FGMS----EIGPWSLMDSSEQSDVIMRM----MARNSMSEKLANDIDTAV 615
Query: 597 TRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLE 635
++ E+A++ +R+N+ ++ I + LLE ++G E
Sbjct: 616 KTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDE 654
>sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1
Length = 688
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 247/460 (53%), Gaps = 43/460 (9%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
+E++ ++ P ++ G + +GVLL+GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 236 FEEIVEFLKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIE 295
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAIA-----GRHARKDPRRRATFEALIAQL 296
GA+R ++F+ A+ N+P VF+DEIDA+ G D R + T ++ ++
Sbjct: 296 MFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQ-TLNQILTEM 354
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F+ VI I ATNRP+ LD +RPGR DR++ +GLPD + R +I V
Sbjct: 355 DG---------FAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKV 405
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
HS K+L +DV+ + RT GFSGAD+ NL+NE+ I++ R+G KI +I D +D+ +
Sbjct: 406 HSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGKDKITLTEIDDSIDR-I 464
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
+ GM + + + + K ++A HE GH + A L D L+P G+
Sbjct: 465 VAGM----------EGTKMIDGKSKAIVAYHEVGHAICATLTEGHDPVQKVTLVPRGQAR 514
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIA 535
++ F P ED + L ++V GGR AE ++FG+ ++T G DL+++T+IA
Sbjct: 515 GLTWFLPGEDPT---LVSKQQLFARIVGGLGGRAAEDVIFGEPEITTGAAGDLQQVTEIA 571
Query: 536 REMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRE 595
R+MV + +G LT P D++ + M+ +L+E
Sbjct: 572 RQMVTMFGMSEIGPWALT-------DPAVKQNDVVLR-----MLARNSMSEKLAEDIDSC 619
Query: 596 LTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLE 635
+ + I + E+A +R+N+ ++ + LLE +TG E
Sbjct: 620 VKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEKETLTGDE 659
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 248/465 (53%), Gaps = 43/465 (9%)
Query: 170 YKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESG 229
+K+V + L E++ ++ +P ++ E G + +GVLL GPPGTGKTL A+ A E+G
Sbjct: 160 FKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAG 219
Query: 230 LPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDP 283
+PF SG++F + GA+R+ ++F A++NAP +F+DEIDA+ AG D
Sbjct: 220 VPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDE 279
Query: 284 RRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIG 343
R + T L+ ++DG FS + +I I ATNR D LD +RPGR DR++ +
Sbjct: 280 REQ-TLNQLLVEMDG---------FSANEGIIIIAATNRADILDPALLRPGRFDRQITVD 329
Query: 344 LPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKI 403
PD R + VH+ K L E VN + + RT GFSGAD+ NL+NE+ +++ R+ KI
Sbjct: 330 RPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKI 389
Query: 404 QQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDW 463
+DI + D+ ++ G K + +S +++ ++A HE GH V+ + D
Sbjct: 390 DARDIDEATDR-VIAGPA---------KKSRVISKKERNIVAYHEGGHTVIGLVLDEADM 439
Query: 464 HAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDG 523
++P G+ +V PRED + T L ++V GGR AE ++FG +V+ G
Sbjct: 440 VHKVTIVPRGQAGGYAVMLPREDRY---FQTKPELLDKIVGLLGGRVAEEIIFG-EVSTG 495
Query: 524 GKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYR-WDDPQVIPT 582
+D ++ T IAR MV G++ ++G L S G + R +++ Q
Sbjct: 496 AHNDFQRATNIARRMVTE--------FGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSD 547
Query: 583 DMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLE 627
+ E+ + E+ R I+E E A L +N+ LE+IA+ LL+
Sbjct: 548 QIAYEIDQ----EIQRIIKECYERAKQILTENRDKLELIAQTLLK 588
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 167 KSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAK 226
K +++V +V + L E++ ++ NP ++ G + +GVLL GPPGTGKTL AR +A
Sbjct: 159 KVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMGAKVPKGVLLVGPPGTGKTLLARAVAG 218
Query: 227 ESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHAR 280
E+G+PF SG++F + GA+R+ ++F ++NAP +F+DE+DA+ AG
Sbjct: 219 EAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDELDAVGRQRGAGLGGG 278
Query: 281 KDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRL 340
D R + T L+ ++DG F + +I + ATNRPD LD +RPGR DR++
Sbjct: 279 HDEREQ-TLNQLLVEMDG---------FEPNEGIIVMAATNRPDVLDPALLRPGRFDRQV 328
Query: 341 YIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGH 400
+ PD K R+ I +H K +A+DV+ E L RT GF+GAD+ NL NE+ I++VR+
Sbjct: 329 VVDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADMENLANEAAILAVRRRK 388
Query: 401 SKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPR 460
+KI +D D +DK ++ G K + +S +++L+A HE GH ++ L
Sbjct: 389 NKITMEDFDDAIDK-VIAG---------PAKKSKVMSERERKLVAYHETGHALVGDLLEH 438
Query: 461 FDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDV 520
D ++P G+ + P+E D+ + + L Q+ V GGR +E +F +D+
Sbjct: 439 ADRTHKISIVPRGRAGGMRWALPKE---DKNFMSKQELLDQITVLLGGRASES-IFLEDI 494
Query: 521 TDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVI 580
+ G ++DLE+ TK+AR MV G++ ++G L D + R Q
Sbjct: 495 STGAQNDLERATKLARAMVTE--------YGMSEKLGPLTLGHKHDEQIFLGRDISRQ-- 544
Query: 581 PTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKL 640
+ + E++ +E++ IE + A L++N +E I +ELL+ + ++++ +
Sbjct: 545 -RNYSEEIAAEIDKEVSSIIEYCYQRAEKILQENTAKVERIVRELLDRETLDAEQLQKLI 603
Query: 641 QG 642
+G
Sbjct: 604 KG 605
>sp|Q9TJ83|FTSH_CYAME ATP-dependent zinc metalloprotease FtsH OS=Cyanidioschyzon merolae
GN=ftsH PE=3 SV=1
Length = 603
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 257/488 (52%), Gaps = 60/488 (12%)
Query: 163 VSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFAR 222
V+ T M+ +V + + L E++ ++ NP ++ G +GVLL GPPGTGKTL A+
Sbjct: 146 VAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIPKGVLLVGPPGTGKTLLAK 205
Query: 223 TLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AG 276
+A E+ +PF SG+EF + GA+R+ ++F A++NAP VF+DEIDA+ AG
Sbjct: 206 AIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAG 265
Query: 277 RHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRI 336
D R + T L+ ++DG + TG VI I ATNR D LD +RPGR
Sbjct: 266 IGGGNDEREQ-TLNQLLTEMDGFEGNTG---------VIVIAATNRVDVLDAALLRPGRF 315
Query: 337 DRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSV 396
DR++ + +PD K R+ I VH+ K+L V+ E + RT GF+GAD+ NL+NE+ I++V
Sbjct: 316 DRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAV 375
Query: 397 RKGHSKIQQQDIVDVLDKQL--LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 454
R+G +I ++I D +D+ + +EG ++ + KRL+A HE GH +
Sbjct: 376 RRGLKQITWKEIDDAIDRVIAGMEGTPIM-------------DGKIKRLIAYHETGHALT 422
Query: 455 AHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERL 514
A L P L+P + ++ F +D ++ + L ++VA GGR AE
Sbjct: 423 ATLLPNHPPVQKVTLIPRRQAKGLTWFM--QDN-ERDLLSKSQLMSMIMVALGGRAAEEA 479
Query: 515 VFGD-DVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYR 573
VFG+ +VT G +DL+++T +AR+MV R G+ SS G L
Sbjct: 480 VFGNAEVTTGASNDLQQVTNLARQMV-----TRFGM--------------SSLGPLCLET 520
Query: 574 WDDPQVIPTDMTL--ELSELFTRELTR----YIEETEELAMNGLRDNKHILEIIAKELLE 627
++ + DM L E+SE ++ IE E + ++ N+ +++ I +EL+E
Sbjct: 521 GNEEIFLGRDMRLMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELME 580
Query: 628 NSRITGLE 635
+ G E
Sbjct: 581 KETLDGKE 588
>sp|B9MPK5|FTSH_CALBD ATP-dependent zinc metalloprotease FtsH OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=ftsH PE=3 SV=1
Length = 616
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 251/459 (54%), Gaps = 42/459 (9%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ NP +Y E G + +G+LL GPPGTGKTL A+ +A E+G+PF SG++F +
Sbjct: 180 LKEVIDFLKNPRKYIELGARIPKGILLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVE 239
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQL 296
GAAR+ ++F A+RNAP VF+DEIDA+ GRH R T L+ ++
Sbjct: 240 MFVGVGAARVRDLFDQAKRNAPCVVFIDEIDAV-GRHRGAGLGGGHDEREQTLNQLLVEM 298
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F + +I + ATNRPD LD +RPGR DR++ + +PDAK R +I V
Sbjct: 299 DG---------FGTNEGIIVMAATNRPDILDPALLRPGRFDRQIVVNVPDAKAREEILKV 349
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ K L EDV+ ++ T GF+GAD+ NL+NE+ +++ RKG +I +++ + + K
Sbjct: 350 HARNKPLGEDVDLSQIAKITAGFTGADLENLLNEAALLAARKGKRQINMEEVQEAVAK-- 407
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
VL+ E++ + + ++K+L A HEAGH ++ + P + ++P G
Sbjct: 408 -----VLMGPEKRSRV---YTEKEKKLTAYHEAGHAIVRTMIPDSEPVHEVSIIPRGYAG 459
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
+++ P+ED Y + + ++V GGR AE+LV +DV+ G D+++ TKIAR
Sbjct: 460 GYTMYLPKEDKF---YASKSDMMREIVTLLGGRVAEKLVL-EDVSTGAASDIKRATKIAR 515
Query: 537 EMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTREL 596
+MV G++ ++G P + + + + + + E++ RE+
Sbjct: 516 DMVTK--------YGMSDKLG----PMTFGTEQEEVFLGRDLALARNYSEEVAAEIDREI 563
Query: 597 TRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLE 635
IEE + A L+ N L +A LLE ++TG E
Sbjct: 564 KSIIEEAYKKAEEILKQNIDKLHKVANALLEKEKLTGEE 602
>sp|Q3JEE4|FTSH_NITOC ATP-dependent zinc metalloprotease FtsH OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=ftsH PE=3 SV=1
Length = 639
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/462 (32%), Positives = 250/462 (54%), Gaps = 43/462 (9%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ Y+ P Q+ G + +G+LL G PGTGKTL AR +A E+G+PF SG++F +
Sbjct: 193 LREIVDYLKEPGQFKAVGAKIPKGILLVGRPGTGKTLLARAVAGEAGVPFYSISGSDFIE 252
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAIA-----GRHARKDPRRRATFEALIAQL 296
GAAR+ +MF A+ AP+ +F+DEID++ G D R + T ++ ++
Sbjct: 253 MFVGVGAARVRDMFKAAKEEAPSILFIDEIDSVGRARGTGLGGGHDEREQ-TLNQILGEM 311
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F+ + V+ + ATNRPD LD +RPGR DR++ + LPD K R ++ +V
Sbjct: 312 DG---------FAAHENVVVLAATNRPDVLDPALLRPGRFDRKVVLDLPDKKARQRVLEV 362
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ LA DV+ E + RTVGFSGAD+ NLVNE+ +++ R+ ++ D+ ++ ++
Sbjct: 363 HTKNVPLAADVDLERVARRTVGFSGADLANLVNEAALLTGRERKKEV-DMDMFNLARDKI 421
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
+ G K E + E+K+L+A HE+GH + A L P D ++P G
Sbjct: 422 VLGA----------KRETILGEEEKKLVAYHESGHALTAWLLPEADPLHQVSIIPRGMAL 471
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
++ P E ++ + YL ++ V GGR +E++ FG DVT G + DL++ T++AR
Sbjct: 472 GVTEQAPEE---ERHSLSRAYLLDRLGVMLGGRISEKITFG-DVTSGAESDLKQATQLAR 527
Query: 537 EMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTREL 596
MV G++ ++G S + + P+ D + + +++ E+
Sbjct: 528 RMVCQ--------WGMSDKIGAAAFSRSEEHVFLGRELSQPR----DFSEQTAQIIDDEI 575
Query: 597 TRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEE 638
R + E E N L++N+ L+ +AK L+E + +EVE+
Sbjct: 576 RRILSEVERKTENLLQENRAKLDALAKALIEAETLNLVEVEK 617
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 232 bits (591), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 240/459 (52%), Gaps = 46/459 (10%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ P ++ G + +GVLL GPPGTGKTL A+ +A E+ +PF SG+EF +
Sbjct: 211 LQEVVTFLKQPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAAVPFFSISGSEFVE 270
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQL 296
GA+R+ ++F A+ NAP +F+DEIDA+ GR + R T L+ ++
Sbjct: 271 MFVGVGASRVRDLFKKAKDNAPCLIFIDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEM 329
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG + TGI I I ATNRPD LD +RPGR DR++ + PD K R++I V
Sbjct: 330 DGFEGNTGI---------IIIAATNRPDVLDSALLRPGRFDRQVIVDAPDLKGRLEILQV 380
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
HS K++ V+ E + RT GF+GAD+ NL+NE+ I++ R+ I +I D +D+ +
Sbjct: 381 HSRNKKVDPSVSLEAIARRTPGFTGADLANLLNEAAILTARRRKEAITILEIDDAVDR-V 439
Query: 417 LEGM-GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKE 475
+ GM G L V + KRL+A HE GH ++ L D L+P G+
Sbjct: 440 VAGMEGTPL-----------VDSKSKRLIAYHEVGHGLVGTLLKDHDPVQKVTLIPRGQA 488
Query: 476 TAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKI 534
++ F P E +QG + LK ++ GR AE +VFG +VT G DDL+K+T +
Sbjct: 489 QGLTWFTPNE---EQGLISRSQLKARITSTLAGRAAEEIVFGKPEVTTGAGDDLQKVTSM 545
Query: 535 AREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTR 594
AR+MV + G++ L G L + S + W + +D + E++
Sbjct: 546 ARQMV-----TKFGMSEL----GPLSLENQSGEVFLGRDWMN----KSDYSEEIAAKIDS 592
Query: 595 ELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITG 633
++ I + + L+ N+ ++E + L E I G
Sbjct: 593 QVREIINTCYQTSKELLQTNRVVMERLVDLLTEQETIEG 631
>sp|Q6MLS7|FTSH1_BDEBA ATP-dependent zinc metalloprotease FtsH 1 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH1 PE=3 SV=1
Length = 645
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 195/675 (28%), Positives = 312/675 (46%), Gaps = 107/675 (15%)
Query: 19 TQGTRALWI-------------AKRWWRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLY 65
TQ T ALW + + ++ F E + + EVA V F +D +
Sbjct: 4 TQKTLALWFFLIIMAVFLFQAYESKQQKAIADFNFSKFTEAVKAGEVATVTFRQDTSEVV 63
Query: 66 VTMKEGFPLEY-------VVDIPLDPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLPG 118
MK F +Y V + + Y F + G + + +F +L+ LP
Sbjct: 64 GEMKPEFEKKYNGTHFSIVGNTQDEGYKF--LQQHGITPNYERADNGGFFQSLLVNWLPL 121
Query: 119 ILILSL----IRE------TVMLLHITSSRLLYKKYNQLFDMAYAENFILPVGYVSDTKS 168
ILI+++ +R+ M + +RLL + N++
Sbjct: 122 ILIVAMFLFIMRQIQAGGGKAMSFGKSRARLLTEHKNRV--------------------- 160
Query: 169 MYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKES 228
+KEV + + L E++ ++ +P +Y + G + +GVLL G PGTGKTL AR +A E+
Sbjct: 161 TFKEVAGVDEAKEDLQEIVSFLKDPKKYTKLGGRIPKGVLLVGSPGTGKTLLARAVAGEA 220
Query: 229 GLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKD 282
G+PF SG++F + GA+R+ ++F ++NAP +F+DEIDA+ GRH
Sbjct: 221 GVPFFTISGSDFVEMFVGVGASRVRDLFEQGKKNAPCLIFIDEIDAV-GRHRGAGMGGGH 279
Query: 283 PRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYI 342
R T L+ ++DG F + VI I ATNRPD LD +RPGR DRR+ +
Sbjct: 280 DEREQTLNQLLVEMDG---------FESSEGVIMIAATNRPDVLDPALLRPGRFDRRVIV 330
Query: 343 GLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 402
PD K R QI VH L DV+ ++ T GFSGAD+ NLVNE+ +++ R
Sbjct: 331 NKPDLKGREQILAVHMRKTPLGPDVDASKIARGTPGFSGADLENLVNEAALVAARSDKKY 390
Query: 403 IQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFD 462
++ +D DK V + E + +S E K++ A HEAGH ++ D
Sbjct: 391 LEMEDFEKAKDK-------VTMGAERRSMV---ISDEDKKVTAYHEAGHTLVGKKLVGLD 440
Query: 463 WHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVA--HGGRCAERLVFGDDV 520
++P G ++ P ++++ + K + ++A GGR AE L+F D+
Sbjct: 441 PIHKVTIIPRGMALGVTQTLPEKESV-----SLSKSKAENMIAFLFGGRAAEELIF-KDI 494
Query: 521 TDGGKDDLEKITKIAREMVISPQNARLG-LAGLTRRVGLLDRP---DSSDGDLIKYRWDD 576
T G +D+E+ T+IAR MV ++LG LA TR D P G+ K + D
Sbjct: 495 TTGAGNDIERATEIARRMVCEWGMSKLGPLAYETR-----DNPVFMGMGYGNKSK-EYSD 548
Query: 577 PQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEV 636
+ D E+ + I+ ++++ LRD++ LE + + LLE I G EV
Sbjct: 549 AKAQEIDT----------EVEKIIKHGYDISIQILRDHQDALERLTQALLEYETIDGHEV 598
Query: 637 EEKLQGLSPVMFEDF 651
+ + G + E +
Sbjct: 599 DMLVNGAAVAEIEKY 613
>sp|D3F124|FTSH1_CONWI ATP-dependent zinc metalloprotease FtsH 1 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH1 PE=3 SV=1
Length = 653
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 214/384 (55%), Gaps = 30/384 (7%)
Query: 163 VSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFAR 222
V K +++V + + L E+ ++ NP ++ G + +GVLL GPPGTGKTL AR
Sbjct: 150 VDSPKITFRDVAGADEAVEELHEIKEFLENPKKFQALGARIPKGVLLYGPPGTGKTLLAR 209
Query: 223 TLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH--- 278
+A E+G+PF SG++F + GA+R+ ++F A++NAP +F+DEIDA+ GRH
Sbjct: 210 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNAPCIIFMDEIDAV-GRHRGA 268
Query: 279 --ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRI 336
R T L+ ++DG F + +I I ATNRPD LD +RPGR
Sbjct: 269 GMGGGHDEREQTLNQLLVEMDG---------FEAKDNIIMIAATNRPDILDPALLRPGRF 319
Query: 337 DRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSV 396
DR++ + PD K R +I +VH+ GK LA +++ + L +T GF+GAD+ NLVNE+ +++
Sbjct: 320 DRQVTVDRPDRKGRSKILEVHTRGKPLAREIDIDALAGQTPGFTGADLANLVNEAALLAA 379
Query: 397 RKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAH 456
R G +I Q ++ + G++ +K + +S E++R+ A HE GH ++ H
Sbjct: 380 RTGKREITQVELEE----------GIMRVIAGPEKKTRVMSSEERRITAYHEMGHALVGH 429
Query: 457 LFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVF 516
D ++ G+ ++ P+ED TT L M + GGR AE ++F
Sbjct: 430 FLEHADPVHKISVIGRGQALGYTISMPQEDKF---LTTRAALGDTMAMTLGGRAAEEIIF 486
Query: 517 GDDVTDGGKDDLEKITKIAREMVI 540
G ++T G +DLEK+T A++MV+
Sbjct: 487 G-EITTGASNDLEKVTGTAKQMVM 509
>sp|C8WEG0|FTSH_ZYMMN ATP-dependent zinc metalloprotease FtsH OS=Zymomonas mobilis subsp.
mobilis (strain NCIB 11163) GN=ftsH PE=3 SV=1
Length = 662
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 181/639 (28%), Positives = 308/639 (48%), Gaps = 87/639 (13%)
Query: 38 LPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAEV 97
+ Y+ FL ++D++ V V D + T F P DP L + + S
Sbjct: 59 VAYSEFLNRVDNNGVKDVTIGHDELSGHFTDNSAFK----TVAPSDPLLVQRLQSKNVTF 114
Query: 98 DLLQKRQIHYFLKVLIA--LLPGILILSL----IRE-------TVMLLHITSSRLLYKKY 144
L + + ++ ++L++ LLP IL + L +R+ M + +RLL +K
Sbjct: 115 RALPEDTVSFW-QILLSQFLLPFILFVGLGFLFVRQMQKNGGGGAMGFGKSRARLLTEKQ 173
Query: 145 NQLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFV 204
++ +K++ + + L+E++ ++ +P ++ G +
Sbjct: 174 GRV---------------------TFKDIAGIEEAREELEEIVDFLKDPTRFSRLGGKIP 212
Query: 205 RGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAP 263
+G LL GPPGTGKTL AR +A E+G+PF SG++F + GA+R+ +MF A++NAP
Sbjct: 213 KGALLVGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAP 272
Query: 264 AFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFIC 318
+F+DEIDA+ GRH + R T L+ ++DG F + +I +
Sbjct: 273 CIIFIDEIDAV-GRHRGAGLGNGNDEREQTLNQLLVEMDG---------FEANEGIIILA 322
Query: 319 ATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVG 378
ATNRPD LD +RPGR DR++ + PD + R++I VH LA DV+ + T G
Sbjct: 323 ATNRPDVLDPALLRPGRFDRQVIVPRPDIEGRLKILQVHMKKTPLAPDVDVRTIARGTPG 382
Query: 379 FSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSV 436
FSGAD+ N+VNE+ +++ RKG + + + DK ++ E V++TEEE
Sbjct: 383 FSGADLANIVNEAALLAARKGKRLVAMSEFEEAKDKVMMGAERRSVIMTEEE-------- 434
Query: 437 SFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFG 496
KR A HEAGH +++ P D ++P G+ ++ P D +
Sbjct: 435 ----KRSTAYHEAGHALVSLHIPGCDPLHKVTVIPRGRALGVTWNLPERDQLS---INIK 487
Query: 497 YLKMQMVVAHGGRCAERLVFGDD-VTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRR 555
+K ++ + GGR AE+LV+G+D + G +D+++ T +AR MV G++ +
Sbjct: 488 QMKARLALCFGGRIAEQLVYGEDSLNTGASNDIQQATDMARAMVTE--------YGMSPK 539
Query: 556 VGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNK 615
+G L ++ D + + Q I D +++ +E+ +EE E A L ++
Sbjct: 540 LGWLRYRENQDEVFLGHSVSRSQNISEDT----AKIIDQEVRVLVEEGESRARQVLTEHI 595
Query: 616 HILEIIAKELLENSRITGLEVEEKLQGLSPVMFEDFVKP 654
L +A L+E ++G E + + G E VKP
Sbjct: 596 DELHRLANALIEYETLSGEEAKRAIAGEKITTIE--VKP 632
>sp|Q9CD58|FTSH_MYCLE ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium leprae
(strain TN) GN=ftsH PE=3 SV=1
Length = 787
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 256/500 (51%), Gaps = 56/500 (11%)
Query: 167 KSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAK 226
K+ + +V + + L E+ ++ NP +Y G + +GVLL GPPGTGKTL AR +A
Sbjct: 159 KTTFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVAG 218
Query: 227 ESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIA-----GRHAR 280
E+G+PF SG++F + GA+R+ ++F A++N+P +FVDEIDA+ G
Sbjct: 219 EAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGG 278
Query: 281 KDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRL 340
D R T L+ ++DG F R VI I ATNRPD LD +RPGR DR++
Sbjct: 279 HD-EREQTLNQLLVEMDG---------FGDRAGVILIAATNRPDILDPALLRPGRFDRQI 328
Query: 341 YIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGH 400
+ PD R + VHS GK +A+D + + L RTVG +GAD+ N+VNE+ +++ R+
Sbjct: 329 PVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENG 388
Query: 401 SKIQQQDIVDVLDKQLLEG---MGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHL 457
I + + +D+ ++ G G +++E+E K++ A HE GH + A
Sbjct: 389 LVITGPALEEAVDR-VIGGPRRKGRIISEQE------------KKITAYHEGGHTLAAWA 435
Query: 458 FPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFG 517
P + +L G+ +V P E D+G T + Q+V A GGR AE LVF
Sbjct: 436 MPDIEPIYKVTILARGRTGGHAVAVPEE---DKGLRTRSEMIAQLVFAMGGRAAEELVFR 492
Query: 518 DDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDP 577
+ T G D+EK TKIAR MV G++ ++G + R S GD R
Sbjct: 493 EPTT-GAVSDIEKATKIARSMVTE--------FGMSSKLGAV-RYGSEHGDPFLGRTMGT 542
Query: 578 QVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVE 637
Q D + E++ E+ + IE A L + + +L+ +A ELLE + E+E
Sbjct: 543 QA---DYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELE 599
Query: 638 ------EKLQGLSPVMFEDF 651
EK L+ MF+DF
Sbjct: 600 GIFASVEKRPRLT--MFDDF 617
>sp|Q98PE4|FTSH_MYCPU ATP-dependent zinc metalloprotease FtsH OS=Mycoplasma pulmonis
(strain UAB CTIP) GN=ftsH PE=3 SV=1
Length = 725
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 244/471 (51%), Gaps = 44/471 (9%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
+ EL+ Y+ NP +Y G +F +G+LL GPPGTGKTL A+ A E+ +PF F S + F +
Sbjct: 224 VQELVDYLKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATAGEANVPFFFISASSFVE 283
Query: 243 SEKS-GAARINEMFSIARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLD 297
GA R+ EMF AR+ APA +F+DE+DA+ + R T ++ ++D
Sbjct: 284 LYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMD 343
Query: 298 GDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVH 357
G E GI + + ATNR D LD +RPGR DR + +GLPD K+R +I +H
Sbjct: 344 GINENAGI---------LIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLH 394
Query: 358 SAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL 417
S GK+L++++ F+++ RT G+SGA + N++NE+ ++SVR+ I I + +D+ ++
Sbjct: 395 SKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDR-VM 453
Query: 418 EGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA 477
G K + +S E+ + +A HEAGH V+ + ++P G
Sbjct: 454 AG---------PAKKSRVISQEELKAVAYHEAGHAVVGLKVKGGNKVQKITIIPRGNAGG 504
Query: 478 ISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAR 536
++ P E+ + L + GGR AE +++G ++++ G DD+ + TKIAR
Sbjct: 505 YNLMTPEEEKYNASKKE---LLATIASYMGGRAAEMIIYGKENISTGASDDISRATKIAR 561
Query: 537 EMVISPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTREL 596
+MV G++ L G + + ++ + + + M E+ E+
Sbjct: 562 KMV-----TEWGMSAL----GPIKYEEDTENPFLGRDYSK-GTFGSKMAHEID----LEI 607
Query: 597 TRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVE--EKLQGLSP 645
+ I +EE+A+ + N +LE+I LLEN I E+E EK L P
Sbjct: 608 RKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEEIEYIEKNMKLPP 658
>sp|B1GZK7|FTSH_UNCTG ATP-dependent zinc metalloprotease FtsH OS=Uncultured termite group
1 bacterium phylotype Rs-D17 GN=ftsH PE=3 SV=1
Length = 631
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 262/501 (52%), Gaps = 54/501 (10%)
Query: 158 LPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGK 217
L VG + K +K+V + + L EL+ ++ +P ++ + G + +GVLL G PGTGK
Sbjct: 145 LAVG--ASKKITFKDVAGCDEAKEELQELIEFLKDPARFQKLGGKIPKGVLLFGSPGTGK 202
Query: 218 TLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAG 276
TL A+ +A E+ +PF +SG+EF + GA+R+ ++F R++AP +F+DEIDA+ G
Sbjct: 203 TLLAKAVAGEANVPFFSSSGSEFVEMFVGVGASRVRDLFDHGRKSAPCLLFIDEIDAV-G 261
Query: 277 RH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFV 331
RH R T L+ ++DG F ++ VI I ATNRPD LD +
Sbjct: 262 RHRFAGIGGGHDEREQTLNQLLVEMDG---------FDSKEGVILIAATNRPDVLDPALL 312
Query: 332 RPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNES 391
RPGR DR++ I PD K R +I VHS +L DVN + RT GF GAD+ NLVNE+
Sbjct: 313 RPGRFDRQVIILSPDLKDREEILGVHSKKIRLDNDVNLNVIARRTPGFVGADLANLVNEA 372
Query: 392 GIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGH 451
+++ R + + +++ + +D+ +L G Q+ + +S ++K ++A HEAGH
Sbjct: 373 ALLAARNSQNAVNMKNMEEAIDR-ILAG---------PQRKSRLMSDKEKNIIAYHEAGH 422
Query: 452 IVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCA 511
++A P D ++P G ++ P ED T+ L ++ + GGR A
Sbjct: 423 TLVAKFLPSADPVHKVSIIPRGPALGYTLQLPEEDKY---LTSKSELLDKLSILFGGRVA 479
Query: 512 ERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVG--LLDRPDSSDGDL 569
E LVF ++T G ++D+ K T IA MV G++ ++G L RP+
Sbjct: 480 EELVF-SEITTGAQNDISKATGIAMRMVTE--------FGMSDKIGPMALQRPNEE---- 526
Query: 570 IKYRWDDPQVIPTDM--TLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLE 627
+ D I D + + SEL E+ I ++ A ++DN IL I LLE
Sbjct: 527 -VFLGRD---ISRDARHSGKTSELIDEEVKNIIYSSKSRASKIIKDNVSILNKIVSYLLE 582
Query: 628 NSRITGLEVEEKLQG--LSPV 646
++G ++++ ++G L+P+
Sbjct: 583 RENLSGEDIDKIIKGEELAPL 603
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,517,040
Number of Sequences: 539616
Number of extensions: 11506838
Number of successful extensions: 39757
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1950
Number of HSP's successfully gapped in prelim test: 422
Number of HSP's that attempted gapping in prelim test: 35039
Number of HSP's gapped (non-prelim): 3106
length of query: 686
length of database: 191,569,459
effective HSP length: 124
effective length of query: 562
effective length of database: 124,657,075
effective search space: 70057276150
effective search space used: 70057276150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)