Your job contains 1 sequence.
>005645
MAILLQAKDRLLSRLKSLTKIQRFNHTLEPQMCREMCSDSFNQEVDVSNWKTVDSRNLGI
TRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRS
EIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHR
DFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGL
SFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAA
YLDQQAGKITAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVW
VFASVLYHGKWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVN
DLTKASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVL
GKIILKTISGGLVAGEEEIDEEEMPEVLDKDSVENYLAKKNRKRGLQPSSAELKLKTAKK
CKWTEKFSSINHELSMNKEDVVPKEEVEEIHKAVKNCQLPDKELKVRTTEKHKWIENSCH
FDQELSINEELVQKEGSQQLGEETQKAAKTCQSPEEEIKVNPEKILEKKDRHSLSTEGTN
KKRDKQKRADDKKKNGLLLSSLFKEK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005645
(686 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2053913 - symbol:AT2G17580 species:3702 "Arabi... 969 5.3e-100 2
TAIR|locus:2010439 - symbol:AT1G28090 species:3702 "Arabi... 777 3.4e-77 1
TAIR|locus:2171641 - symbol:AT5G23690 species:3702 "Arabi... 725 1.1e-71 1
TAIR|locus:2099473 - symbol:AT3G48830 species:3702 "Arabi... 671 5.8e-66 1
UNIPROTKB|Q4K5Y6 - symbol:pcnB "Poly(A) polymerase" speci... 290 6.5e-23 1
TIGR_CMR|GSU_3250 - symbol:GSU_3250 "polyA polymerase" sp... 225 1.3e-20 2
TIGR_CMR|SO_0872 - symbol:SO_0872 "polyA polymerase" spec... 254 9.9e-19 1
TIGR_CMR|CBU_0286 - symbol:CBU_0286 "polyA polymerase" sp... 242 1.6e-17 1
UNIPROTKB|Q9KUC8 - symbol:VC_0594 "PolyA polymerase" spec... 232 2.5e-16 1
TIGR_CMR|VC_0594 - symbol:VC_0594 "polyA polymerase" spec... 232 2.5e-16 1
TIGR_CMR|CPS_4310 - symbol:CPS_4310 "polyA polymerase" sp... 230 4.7e-16 1
UNIPROTKB|P0ABF1 - symbol:pcnB species:83333 "Escherichia... 221 4.5e-15 1
TIGR_CMR|CPS_4215 - symbol:CPS_4215 "tRNA nucleotidyltran... 152 1.7e-07 1
UNIPROTKB|F1NMW8 - symbol:TRNT1 "Uncharacterized protein"... 127 3.5e-07 1
TIGR_CMR|NSE_0646 - symbol:NSE_0646 "polyA polymerase fam... 135 1.0e-05 1
ZFIN|ZDB-GENE-040625-176 - symbol:trnt1 "tRNA nucleotidyl... 133 1.8e-05 1
TIGR_CMR|BA_1559 - symbol:BA_1559 "polyA polymerase" spec... 132 2.2e-05 1
UNIPROTKB|Q1RML6 - symbol:TRNT1 "tRNA nucleotidyl transfe... 127 9.0e-05 1
FB|FBgn0037369 - symbol:CG2100 species:7227 "Drosophila m... 127 0.00011 1
UNIPROTKB|F1SFL7 - symbol:TRNT1 "Uncharacterized protein"... 126 0.00012 1
MGI|MGI:1917297 - symbol:Trnt1 "tRNA nucleotidyl transfer... 126 0.00012 1
RGD|1308857 - symbol:Trnt1 "tRNA nucleotidyl transferase,... 125 0.00015 1
UNIPROTKB|E2R8M0 - symbol:TRNT1 "Uncharacterized protein"... 122 0.00032 1
TIGR_CMR|APH_1216 - symbol:APH_1216 "polyA polymerase/tRN... 121 0.00037 1
UNIPROTKB|Q96Q11 - symbol:TRNT1 "CCA tRNA nucleotidyltran... 121 0.00041 1
TIGR_CMR|ECH_1116 - symbol:ECH_1116 "polyA polymerase/tRN... 120 0.00046 1
TIGR_CMR|DET_0409 - symbol:DET_0409 "polyA polymerase fam... 120 0.00050 1
>TAIR|locus:2053913 [details] [associations]
symbol:AT2G17580 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006396 "RNA processing"
evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR002646 Pfam:PF01743 GO:GO:0009507 EMBL:CP002685
GO:GO:0003723 GO:GO:0006396 GO:GO:0016779 IPI:IPI00525115
RefSeq:NP_179349.2 UniGene:At.40128 ProteinModelPortal:F4INK3
SMR:F4INK3 PRIDE:F4INK3 EnsemblPlants:AT2G17580.1 GeneID:816265
KEGG:ath:AT2G17580 OMA:KEDCARI Uniprot:F4INK3
Length = 757
Score = 969 (346.2 bits), Expect = 5.3e-100, Sum P(2) = 5.3e-100
Identities = 210/427 (49%), Positives = 272/427 (63%)
Query: 19 TKIQRFNHTLEP---QMC---REMCSDSFNQEVDVSNWKTVDSRNLGITRAMIPQPSWVV 72
+K+QR N TL + C R++ + N VD S WK V + + GI +MIP+ S V
Sbjct: 23 SKLQRSNCTLAEGFMEKCSSIRQVIDEDINS-VDTSKWKKVRASDAGIKNSMIPESSMNV 81
Query: 73 LKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRV 132
L++L+ QGF AYLVGGCVRDL+L RVPKD+DVITTA+LKQIRR FHR+++IG+RFPIC V
Sbjct: 82 LRLLRRQGFDAYLVGGCVRDLILNRVPKDYDVITTADLKQIRRLFHRAQVIGKRFPICHV 141
Query: 133 HIKGSVIEVSSFETVA-----------KHGEGKETVL-----LSQIPYGCDEIDLVRWRN 176
+ GS+IEVSSF+TVA K G +T L ++ G D D RWRN
Sbjct: 142 WMGGSIIEVSSFDTVAHSDSDLEKSKEKSGVSLDTKANKNNSLFKMYSGWDIKDCKRWRN 201
Query: 177 SIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXXXXXXXXX 236
S+ RDFTINSLF++PF IYDYANG+ DL LKLRTL+PA+LSF EDC
Sbjct: 202 SLQRDFTINSLFYNPFDFTIYDYANGMEDLTDLKLRTLVPAHLSFKEDCARILRGLRIAA 261
Query: 237 XXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICXXXXXXXXXXXXP 296
S KD+ TA+ SS+ LD+ R++ME+NYML+YGAA SI P
Sbjct: 262 RLGLSLSKDVKTAIPEFVSSVANLDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLP 321
Query: 297 FHAAYLDQQAGKITAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDA 356
F AAYLDQ A K + + +ML+RLF N+DKLVSCD+PAD LW+ +L+FH ALV +PQ+A
Sbjct: 322 FQAAYLDQ-ASKTSLSSSLMLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEA 380
Query: 357 FVVWVFASVLYHGKWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQ 416
VV FA++LYHG W + V+FAR+ + + PE+S S SDE LA V+E ++
Sbjct: 381 IVVRAFAALLYHGNWSKAVEFAREHETSVIGYAPEVSKSSRKRSDEDLAEAVSEFTCLLK 440
Query: 417 DCVNDLT 423
D LT
Sbjct: 441 DTQYVLT 447
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 196/517 (37%), Positives = 269/517 (52%)
Query: 165 GCDEIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
G D D RWRNS+ RDFTINSLF++PF IYDYANG+ DL LKLRTL+PA+LSF ED
Sbjct: 190 GWDIKDCKRWRNSLQRDFTINSLFYNPFDFTIYDYANGMEDLTDLKLRTLVPAHLSFKED 249
Query: 225 CXXXXXXXXXXXXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICX 284
C S KD+ TA+ SS+ LD+ R++ME+NYML+YGAA SI
Sbjct: 250 CARILRGLRIAARLGLSLSKDVKTAIPEFVSSVANLDQFRLIMEMNYMLAYGAAAPSILL 309
Query: 285 XXXXXXXXXXXPFHAAYLDQQAGKITAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLS 344
PF AAYLDQ A K + + +ML+RLF N+DKLVSCD+PAD LW+ +L+
Sbjct: 310 LMKFKLLHVLLPFQAAYLDQ-ASKTSLSSSLMLVRLFSNMDKLVSCDQPADPKLWIAVLA 368
Query: 345 FHQALVSDPQDAFVVWVFASVLYHGKWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQL 404
FH ALV +PQ+A VV FA++LYHG W + V+FAR+ + + PE+S S SDE L
Sbjct: 369 FHIALVRNPQEAIVVRAFAALLYHGNWSKAVEFAREHETSVIGYAPEVSKSSRKRSDEDL 428
Query: 405 AVKVTELALSVQDCVNDLTKAS--------------SGYVFVSKKIERNVQQIFDVLVNS 450
A V+E ++D LT SG VF+ KK R+V + F + ++
Sbjct: 429 AEAVSEFTCLLKDTQYVLTDKEALREALYLYPDFKFSGLVFIPKKKGRDVAEGF-MRLSD 487
Query: 451 IESYNSGKRSHIIDYDMLGKGNLVETRFVLGKIILKTISGGLVAG--------XXXXXXX 502
+ESY S K IDY +LGKGN E RFVLGKIIL TI+ G V
Sbjct: 488 VESYESQKEGFSIDYVLLGKGNPCEVRFVLGKIILDTITEGTVIEPLNSVKKKQSTRNHI 547
Query: 503 XXXXVLDKDSVENYLAKK-----NRKRGLQPSSAELKLKTAKKCKW-TEKFSSINHELSM 556
L+K E +++K N + + S+A LK K+ + +E+ + E+
Sbjct: 548 VPAACLEKKD-ELFVSKSSKEDNNNQTPVHDSNASSVLKILKRTREDSEQNNDQETEVCP 606
Query: 557 NXXXXXXXXXXXXIHKAVKNCQLPDKELKVRTTEKHKWIENSCHFDQELSINEELVQKEG 616
+ + +K + KE V K K + S DQE + + K
Sbjct: 607 RTPSGPAKNQDQSVVQMLKRRR--SKEAPVSEPPKQKTSKRSRSDDQEAVGSLSVPAKIQ 664
Query: 617 SQQLGEETQKAAKTCQSPEEEIKVNPEKILEKKDRHS 653
Q +T A C+ P+++ N K +K +H+
Sbjct: 665 HQSNKHDTN--APICELPKQKTSKNHSKE-SRKVKHN 698
Score = 43 (20.2 bits), Expect = 5.3e-100, Sum P(2) = 5.3e-100
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 577 CQLPDKELKVRTTEKH-KWIENSCHFDQELSINEELVQKEGSQQLGEETQKAAKTCQSPE 635
C+LP K +T++ H K H D L + E KE Q + K+
Sbjct: 677 CELP----KQKTSKNHSKESRKVKHND--LPVKEI---KEAKQGFVSD-----KSMSDLL 722
Query: 636 EEIKVNPEKILEKKDRHSLSTEGTN 660
+ ++ + +++ K++ +SLS+E TN
Sbjct: 723 QVLEKSSQQVSSKEENNSLSSEKTN 747
>TAIR|locus:2010439 [details] [associations]
symbol:AT1G28090 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006396 "RNA processing"
evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002646 Pfam:PF01743 EMBL:CP002684
GO:GO:0003723 GO:GO:0006396 GO:GO:0016779 IPI:IPI00536358
RefSeq:NP_174130.2 UniGene:At.40938 ProteinModelPortal:F4HUW0
SMR:F4HUW0 PRIDE:F4HUW0 EnsemblPlants:AT1G28090.1 GeneID:839702
KEGG:ath:AT1G28090 OMA:LPIQASY PhylomeDB:F4HUW0 Uniprot:F4HUW0
Length = 541
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 163/376 (43%), Positives = 224/376 (59%)
Query: 50 WKTVDSRNLGITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTAN 109
WK +D+ GI R+MIP + +VL LK +GFQ YLVGGCVRDL+L R+PKDFDVITTA
Sbjct: 82 WKKLDANEFGIQRSMIPDSTRMVLNKLKKKGFQVYLVGGCVRDLILDRIPKDFDVITTAE 141
Query: 110 LKQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEI 169
LK++R+ F +I+GRRFPIC V++ +IEVSSF T A+ G+ + P GCDE
Sbjct: 142 LKEVRKVFPGCQIVGRRFPICHVYVDDIIIEVSSFSTSARTGKAPNKSF--RRPAGCDER 199
Query: 170 DLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXX 229
D +RW+N + RDFT+N L FDP N +YDY G+ DLR K+RT+ A LSF ED
Sbjct: 200 DYIRWKNCLQRDFTVNGLMFDPSENVVYDYIGGVEDLRNSKVRTVSAANLSFVEDTARIL 259
Query: 230 XXXXXXXXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICXXXXXX 289
S KD+ ++ LSSS+ RLD SRI ME+NYML+YG+AE+S+
Sbjct: 260 RAIRIAARLGFSLTKDVAISVKELSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFG 319
Query: 290 XXXXXXPFHAAYLDQQAGKITAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQAL 349
P A+YL Q + ML+ LF NLD+LV+ DRP LW+G+L+FH+AL
Sbjct: 320 LMEILLPIQASYLVSQGFRRRDGRSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKAL 379
Query: 350 VSDPQDAFVVWVFASVLYHG-KWKEGVKFARDRAKEPVKFVPEISGFSE--IESDEQLAV 406
V P+D VV F +Y E + AR +K+ E+S + +S+ +++
Sbjct: 380 VDQPRDPTVVASFCLAIYSEVSLSEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQ 439
Query: 407 KVTELALSVQDCVNDL 422
+V +LA S++ L
Sbjct: 440 QVIKLAESIRSAARKL 455
>TAIR|locus:2171641 [details] [associations]
symbol:AT5G23690 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0006396 "RNA
processing" evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002646 Pfam:PF01743
EMBL:CP002688 GO:GO:0003723 GO:GO:0006396 GO:GO:0016779
IPI:IPI00531764 RefSeq:NP_197758.2 UniGene:At.30996
ProteinModelPortal:F4KE92 SMR:F4KE92 PRIDE:F4KE92 DNASU:832434
EnsemblPlants:AT5G23690.1 GeneID:832434 KEGG:ath:AT5G23690
OMA:CHNSLWI Uniprot:F4KE92
Length = 527
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 169/467 (36%), Positives = 253/467 (54%)
Query: 39 DSFNQEVDVSNWKTVDSRNLGITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRV 98
D + E WK ++S++LG++ +MI + + VL LKS+G YLVGGCVRDL+L+R
Sbjct: 53 DKVSDEPRDREWKQLNSKDLGLSSSMIAKSTRKVLNGLKSKGHDVYLVGGCVRDLILKRT 112
Query: 99 PKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKETVL 158
PKDFD++T+A L+++ R F R EI+GRRFPIC VHI +IEVSSF T A++ + T
Sbjct: 113 PKDFDILTSAELREVVRTFPRCEIVGRRFPICHVHIGDDLIEVSSFSTSAQNSS-RNTRT 171
Query: 159 LSQIPYGCD-EIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPA 217
+ G D + D +R N + RDFTIN L FDP+ +YDY G+ D+R K+RT+I A
Sbjct: 172 ECKESSGSDGDEDCIRLNNCLQRDFTINGLMFDPYAKVVYDYLGGMEDIRKAKVRTVIHA 231
Query: 218 YLSFTEDCXXXXXXXXXXXXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGA 277
SF +DC K+ + +LS ++RLDK RI+ME+NYML+YG+
Sbjct: 232 GTSFHQDCARILRAIRIAARLGFRMSKETAHFIKNLSLLVQRLDKGRILMEMNYMLAYGS 291
Query: 278 AESSICXXXXXXXXXXXXPFHAAYLDQQAGKITAENPMMLMRLFFNLDKLVSCDRPADYT 337
AE+S+ P AAYL + + + ML+ LF NLDKL++ DRP +
Sbjct: 292 AEASLRLLWKFGILEILLPIQAAYLARSGFRRRDKRTNMLLSLFANLDKLLAPDRPCHSS 351
Query: 338 LWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GKWKEGVKFARDRAKEPVKFVPEISGFS 396
LW+ +L+FH+AL P+ VV F+ +++ G E V+ + + K E+
Sbjct: 352 LWIAILAFHKALADKPRSPIVVAAFSLAVHNCGDILEAVEITKKITRPHDKSFFELVEPE 411
Query: 397 EIESDEQLAVKVTELALSVQDCVNDLT------KASSGY--------VFVSKKIERNVQQ 442
E + L +V +L S++D +N +T KA S Y VF+ ++ +
Sbjct: 412 ENLDFQTLLDEVMDLDASIEDALNQMTDAYFISKAMSAYPQAPYSDLVFIPLQLYLRAGR 471
Query: 443 IFDVLVNSIESYN-SGKRSHIIDYDMLGKGNLVETRFVLGKIILKTI 488
IFD + N K+ I+Y L G E R V +++ T+
Sbjct: 472 IFDCVKNEETRIGFEAKQGSKIEYGSLNSGYFPEIRHVFARVVFDTV 518
>TAIR|locus:2099473 [details] [associations]
symbol:AT3G48830 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006396 "RNA processing" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000504 InterPro:IPR002646
InterPro:IPR012677 Pfam:PF00076 Pfam:PF01743 PROSITE:PS50102
SMART:SM00360 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396
eggNOG:COG0617 EMBL:AL132963 GO:GO:0016779 IPI:IPI00528017
PIR:T49279 RefSeq:NP_190452.1 UniGene:At.35678
ProteinModelPortal:Q9M300 SMR:Q9M300 PaxDb:Q9M300 PRIDE:Q9M300
EnsemblPlants:AT3G48830.1 GeneID:824044 KEGG:ath:AT3G48830
TAIR:At3g48830 HOGENOM:HOG000240765 InParanoid:Q9M300 OMA:FTISKET
PhylomeDB:Q9M300 ProtClustDB:CLSN2913480 Genevestigator:Q9M300
Uniprot:Q9M300
Length = 881
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 153/420 (36%), Positives = 238/420 (56%)
Query: 42 NQEVDVSNWKTVDSRNLGITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKD 101
N+ WK ++S++LGIT +MI +P+ +VL LKS+G+ YLVGGCVRDL+L+R PKD
Sbjct: 53 NKTSKAPEWKKLNSKDLGITTSMISKPTRIVLNGLKSKGYDVYLVGGCVRDLILKRTPKD 112
Query: 102 FDVITTANLKQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQ 161
FD++T+A L+++ R F R EIIG++FPIC VHI +IEVSSF T A++ + T S
Sbjct: 113 FDILTSAELREVVRSFSRCEIIGKKFPICHVHIGNDMIEVSSFSTSAQNSL-RNTRTGSG 171
Query: 162 IPYGCDEIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSF 221
G + D +R+ N + RDFTIN L FDP+ IYDY GI D++ K+RT+ A SF
Sbjct: 172 KSNGSYDEDSIRFNNCLQRDFTINGLMFDPYAKVIYDYLGGIEDIKKAKVRTVFHAGTSF 231
Query: 222 TEDCXXXXXXXXXXXXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESS 281
ED + K+ + +LS ++RL + RI++E+NYML+YG+AE+S
Sbjct: 232 QEDSARILRGTRIAARLGFTISKETAHFLKNLSFLVQRLHRGRILLEMNYMLAYGSAEAS 291
Query: 282 ICXXXXXXXXXXXXPFHAAYLDQQAGKITAENPMMLMRLFFNLDKLVSCDRPADYTLWVG 341
+ P AAYL + K + +L+ LF NLDKL++ D+P +LW+
Sbjct: 292 LRLLWKFGILEILLPIQAAYLVRTGFKRRDKRSNLLLSLFGNLDKLLAPDKPCHSSLWLT 351
Query: 342 LLSFHQALVSDPQDAFVVWVFASVLYHG-KWKEGVKFARDRAKEPVKFVPEISGFSEIES 400
+L+ H+AL P+ VV F+ +++G E VK R K + E+ E++S
Sbjct: 352 ILALHKALADQPRYPSVVAAFSLAVHNGGDVLEAVKNTRKVTKPHNRSFFELLEPEEMDS 411
Query: 401 DEQLAVKVTELALSVQDCVNDLTKASSGYVFVSKKIERNVQQIF-DVLVNSIESYNSGKR 459
+ L +V + S+++ + +T F+SK + Q + D++ ++ Y +R
Sbjct: 412 -QTLLDEVMDFDSSIKEALGQMTDGR----FISKAMAAYPQAPYSDMVFIPLQLYLDARR 466
>UNIPROTKB|Q4K5Y6 [details] [associations]
symbol:pcnB "Poly(A) polymerase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006276 "plasmid
maintenance" evidence=ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS] InterPro:IPR002646 InterPro:IPR010206 Pfam:PF01743
GO:GO:0005524 GO:GO:0006378 GO:GO:0003723 EMBL:CP000076
GO:GO:0006276 eggNOG:COG0617 InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 KO:K00970 InterPro:IPR025866
Pfam:PF12626 TIGRFAMs:TIGR01942 RefSeq:YP_262347.2 GeneID:3479671
KEGG:pfl:PFL_5275 PATRIC:19880025 HOGENOM:HOG000256526
ProtClustDB:CLSK868862 BioCyc:PFLU220664:GIX8-5316-MONOMER
Uniprot:Q4K5Y6
Length = 463
Score = 290 (107.1 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 73/235 (31%), Positives = 119/235 (50%)
Query: 51 KTVDSRNLGITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANL 110
+ ++S + RA + + +++ L++ G+QAYLVGGCVRD+LL PKDFDV T+A
Sbjct: 24 EVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVGGCVRDMLLNITPKDFDVATSATP 83
Query: 111 KQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKE-TVLLSQIPYGC--- 166
+Q++ +F + IIGRRF + +H +IEV++F E E + S+ G
Sbjct: 84 EQVKAEFRNARIIGRRFKLVHIHFGREIIEVATFRANHPQNEDDEDSNQSSRNESGRILR 143
Query: 167 DEIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCX 226
D + ++ RDFTIN+L++DP +I DYANG+ D+R +R + + ED
Sbjct: 144 DNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVHDIRNNLIRLIGDPRQRYQEDPV 203
Query: 227 XXXXXXXXXXXXXXSFCKDIDTAMHSLSSSIERLDKSRIMME-LNYMLSYGAAES 280
K + L+ + + +R+ E L LS AA++
Sbjct: 204 RMLRAVRFAAKLNFGIEKHTAAPIRELAPMLREIPSARLFEEVLKLFLSGYAADT 258
>TIGR_CMR|GSU_3250 [details] [associations]
symbol:GSU_3250 "polyA polymerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 GO:GO:0006378 GO:GO:0003723
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 HOGENOM:HOG000256527 KO:K00970
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942
RefSeq:NP_954291.2 ProteinModelPortal:Q747L5 GeneID:2686371
KEGG:gsu:GSU3250 PATRIC:22029341 ProtClustDB:CLSK829184
BioCyc:GSUL243231:GH27-3226-MONOMER Uniprot:Q747L5
Length = 459
Score = 225 (84.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 52/119 (43%), Positives = 71/119 (59%)
Query: 57 NLGITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQ 116
N I+R+++ + VL L+ GF AYLVGGCVRDLLL R PKDFDV T A QI+R
Sbjct: 16 NHPISRSLVSPNALRVLYRLRDNGFIAYLVGGCVRDLLLGREPKDFDVATDATPNQIKRI 75
Query: 117 FHRSEIIGRRFPICRVHIKGSVIEVSSFETVA--KHGEGKETVLLSQIPYGCDEIDLVR 173
F ++GRRF + +H +IEV++F ++ + GEG E V G DE + +R
Sbjct: 76 FRNCRLVGRRFRLAHIHFTDEIIEVATFRALSPPEQGEG-EPVADETGQRGGDEAERLR 133
Score = 92 (37.4 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 31/130 (23%), Positives = 54/130 (41%)
Query: 176 NSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXXXXXXXX 235
+++ RDFT+N+L + I DYA G+ DL+ +RT+ + FTED
Sbjct: 157 DALRRDFTVNALAYCIADFSIIDYAGGMEDLQRGMIRTIGDPRVRFTEDPVRMLRAVRFA 216
Query: 236 XXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICXXXXXXXXXXXX 295
+ ++ AM L+ +I R R+ E+ + G E +
Sbjct: 217 AVLGFAVEEETWQAMLDLAPAITRATAPRLYEEMLKLFLSGEGERAYQLLRQTGLFAHLF 276
Query: 296 PFHAAYLDQQ 305
P A+L ++
Sbjct: 277 PGFEAWLGEE 286
>TIGR_CMR|SO_0872 [details] [associations]
symbol:SO_0872 "polyA polymerase" species:211586
"Shewanella oneidensis MR-1" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 GO:GO:0006378 GO:GO:0003723
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 KO:K00970 OMA:RFMAKLD
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942
HOGENOM:HOG000256526 RefSeq:NP_716503.2 ProteinModelPortal:Q8EIG7
GeneID:1168719 KEGG:son:SO_0872 PATRIC:23521405
ProtClustDB:CLSK905987 Uniprot:Q8EIG7
Length = 478
Score = 254 (94.5 bits), Expect = 9.9e-19, P = 9.9e-19
Identities = 67/173 (38%), Positives = 92/173 (53%)
Query: 60 ITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHR 119
I+R I + + VL L GFQAYLVGG VRDLLL PKDFDV+T A ++I++ F
Sbjct: 51 ISRKQISENALKVLYRLNKAGFQAYLVGGGVRDLLLGLEPKDFDVVTNATPEEIKKLFRN 110
Query: 120 SEIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKETV--------LLSQIPYGCDEIDL 171
++GRRF + + VIEV++F HGE E + LL YG EID
Sbjct: 111 CRVVGRRFRLAHIVFGRDVIEVATFR--GHHGESNEKISKANAEGRLLRDNVYG--EID- 165
Query: 172 VRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
++ RDFT+N+L++D I Y G+ DL+ LR + + ED
Sbjct: 166 ---EDAERRDFTVNALYYDISDYSIRSYGGGMEDLKAGTLRLIGDPETRYRED 215
>TIGR_CMR|CBU_0286 [details] [associations]
symbol:CBU_0286 "polyA polymerase" species:227377
"Coxiella burnetii RSA 493" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 GO:GO:0006378 GO:GO:0003723
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004810
InterPro:IPR026007 PANTHER:PTHR13734:SF5 GO:GO:0004652
HOGENOM:HOG000256527 KO:K00970 OMA:RFMAKLD InterPro:IPR025866
Pfam:PF12626 TIGRFAMs:TIGR01942 RefSeq:NP_819330.1
ProteinModelPortal:Q83EM9 PRIDE:Q83EM9 GeneID:1208168
KEGG:cbu:CBU_0286 PATRIC:17929263 ProtClustDB:CLSK913956
BioCyc:CBUR227377:GJ7S-292-MONOMER Uniprot:Q83EM9
Length = 439
Score = 242 (90.2 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 72/241 (29%), Positives = 114/241 (47%)
Query: 51 KTVDSRNLGITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANL 110
+ + +N I+R+ I + VL L G++AYLVGG VRD+LL PKDFD+ T A
Sbjct: 24 RVIKRKNHSISRSDISPNALRVLYRLSKSGYEAYLVGGGVRDMLLSYHPKDFDIATNARP 83
Query: 111 KQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSFETVAKH-------GEGKET--VLLSQ 161
+IR+ F S +IGRRF + V+ +IEVS+F A+ E ++T +LS+
Sbjct: 84 HEIRKLFKNSRLIGRRFRLVHVYFPNEIIEVSTFRANAEELLKEEPLSEMQKTGATMLSE 143
Query: 162 I-PYGCDEIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLS 220
YG E D WR RDFT+N+L+++ + D+ G+ DL +R +
Sbjct: 144 DNTYGTIEEDA--WR----RDFTVNALYYNITDFSVIDFTGGMRDLHQRLIRMIGDPTQR 197
Query: 221 FTEDCXXXXXXXXXXXXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAES 280
+ ED D + + L + + + +R+ E+ + G A
Sbjct: 198 YHEDPVRLLRAIRLAAKLDFKIHPDTEEPLKKLHNLLRHVPSARLFTEVLKIFFEGHAVR 257
Query: 281 S 281
S
Sbjct: 258 S 258
>UNIPROTKB|Q9KUC8 [details] [associations]
symbol:VC_0594 "PolyA polymerase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006378 GO:GO:0003723 GO:GO:0006396 InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 KO:K00970 OMA:RFMAKLD
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942 PIR:C82304
RefSeq:NP_230244.1 ProteinModelPortal:Q9KUC8 GeneID:2615382
KEGG:vch:VC0594 PATRIC:20080300 ProtClustDB:CLSK874026
Uniprot:Q9KUC8
Length = 457
Score = 232 (86.7 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 66/221 (29%), Positives = 105/221 (47%)
Query: 60 ITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHR 119
I+R I + + VL L GF+A+LVGG VRDLLL PKDFDV T A +Q+R+ F
Sbjct: 29 ISRQQISENALKVLYRLHGAGFEAFLVGGGVRDLLLGGKPKDFDVATNATPEQLRQLFRN 88
Query: 120 SEIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKETV-LLSQIPYGC---DEIDLVRWR 175
+IGRRF + + ++EV++F H E ++ + +Q G D +
Sbjct: 89 CRLIGRRFRLAHIMFGRDIVEVATFR--GHHQESSQSQNIAAQSEAGMLLRDNVYGTIDE 146
Query: 176 NSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXXXXXXXX 235
++ RDFTIN+++++ I+DYA G+ DL +R + + ED
Sbjct: 147 DAERRDFTINAMYYNIADYSIHDYAGGMEDLEDRLVRLIGDPETRYREDPVRMLRAVRFA 206
Query: 236 XXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYG 276
+D + L+ + + +R+ E ML G
Sbjct: 207 VKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEESLKMLQAG 247
>TIGR_CMR|VC_0594 [details] [associations]
symbol:VC_0594 "polyA polymerase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006378 GO:GO:0003723 GO:GO:0006396 InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 KO:K00970 OMA:RFMAKLD
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942 PIR:C82304
RefSeq:NP_230244.1 ProteinModelPortal:Q9KUC8 GeneID:2615382
KEGG:vch:VC0594 PATRIC:20080300 ProtClustDB:CLSK874026
Uniprot:Q9KUC8
Length = 457
Score = 232 (86.7 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 66/221 (29%), Positives = 105/221 (47%)
Query: 60 ITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHR 119
I+R I + + VL L GF+A+LVGG VRDLLL PKDFDV T A +Q+R+ F
Sbjct: 29 ISRQQISENALKVLYRLHGAGFEAFLVGGGVRDLLLGGKPKDFDVATNATPEQLRQLFRN 88
Query: 120 SEIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKETV-LLSQIPYGC---DEIDLVRWR 175
+IGRRF + + ++EV++F H E ++ + +Q G D +
Sbjct: 89 CRLIGRRFRLAHIMFGRDIVEVATFR--GHHQESSQSQNIAAQSEAGMLLRDNVYGTIDE 146
Query: 176 NSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXXXXXXXX 235
++ RDFTIN+++++ I+DYA G+ DL +R + + ED
Sbjct: 147 DAERRDFTINAMYYNIADYSIHDYAGGMEDLEDRLVRLIGDPETRYREDPVRMLRAVRFA 206
Query: 236 XXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYG 276
+D + L+ + + +R+ E ML G
Sbjct: 207 VKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEESLKMLQAG 247
>TIGR_CMR|CPS_4310 [details] [associations]
symbol:CPS_4310 "polyA polymerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006401 "RNA
catabolic process" evidence=ISS] InterPro:IPR002646
InterPro:IPR010206 Pfam:PF01743 GO:GO:0005524 GO:GO:0006378
GO:GO:0003723 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0617 InterPro:IPR026007 PANTHER:PTHR13734:SF5
GO:GO:0004652 HOGENOM:HOG000256527 KO:K00970 OMA:RFMAKLD
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942
RefSeq:YP_270960.1 ProteinModelPortal:Q47W62 STRING:Q47W62
GeneID:3519879 KEGG:cps:CPS_4310 PATRIC:21471471
BioCyc:CPSY167879:GI48-4320-MONOMER Uniprot:Q47W62
Length = 474
Score = 230 (86.0 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 69/231 (29%), Positives = 106/231 (45%)
Query: 60 ITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHR 119
++R ++ + VL L GF AYLVGG VRD+LL PKDFD+ T A +I+ F
Sbjct: 42 VSRKLLSPNALKVLYRLNKGGFDAYLVGGGVRDILLGFKPKDFDIATNATPDEIKELFRN 101
Query: 120 SEIIGRRFPICRVHIKGSVIEVSSF----ETVAKHGEG-KET-------VLLSQIPYGCD 167
+IGRRF + + +IEV++F + ++ + K+T +LL YG
Sbjct: 102 CRLIGRRFRLAHIVFGREIIEVATFRGHHDNASEQEKSCKKTSKQSEDGMLLRDNIYGSI 161
Query: 168 EIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXX 227
E D R RDFTIN+L++ K+YD+ANG+ D+ +R + + ED
Sbjct: 162 EEDAER------RDFTINALYYSAKDFKVYDFANGVQDVNDKVIRLIGDPETRYREDPVR 215
Query: 228 XXXXXXXXXXXXXSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAA 278
D + LS+ + + +R+ E M G A
Sbjct: 216 MLRAIRFATKLDMQISDDTKAPIKELSTLMANIPAARLFEEFLKMFIAGKA 266
>UNIPROTKB|P0ABF1 [details] [associations]
symbol:pcnB species:83333 "Escherichia coli K-12"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0009451 "RNA modification"
evidence=IGI;IMP;IDA] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0006276 "plasmid maintenance" evidence=IEA;IMP] [GO:0006378
"mRNA polyadenylation" evidence=IEA;IMP] [GO:0003723 "RNA binding"
evidence=IEA;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR002646 InterPro:IPR010206 Pfam:PF01743
GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0006276 eggNOG:COG0617
InterPro:IPR026007 PANTHER:PTHR13734:SF5 GO:GO:0009451
GO:GO:0004652 EMBL:M20574 EMBL:S48039 PIR:G64737 RefSeq:NP_414685.4
RefSeq:YP_488446.1 ProteinModelPortal:P0ABF1 SMR:P0ABF1
DIP:DIP-47859N EnsemblBacteria:EBESCT00000000999
EnsemblBacteria:EBESCT00000001000 EnsemblBacteria:EBESCT00000001001
EnsemblBacteria:EBESCT00000017202 GeneID:12934035 GeneID:947318
KEGG:ecj:Y75_p0140 KEGG:eco:b0143 PATRIC:32115393 EchoBASE:EB0684
EcoGene:EG10690 HOGENOM:HOG000256527 KO:K00970 OMA:RFMAKLD
ProtClustDB:PRK11623 BioCyc:EcoCyc:EG10690-MONOMER
BioCyc:ECOL316407:JW5808-MONOMER BioCyc:MetaCyc:EG10690-MONOMER
Genevestigator:P0ABF1 InterPro:IPR025866 Pfam:PF12626
TIGRFAMs:TIGR01942 Uniprot:P0ABF1
Length = 465
Score = 221 (82.9 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 69/203 (33%), Positives = 103/203 (50%)
Query: 33 CREMCS-DSFNQEVDVSNWK-TVDSRNL-GITRAMIPQPSWVVLKILKSQGFQAYLVGGC 89
CR++ S + E V+ + TV R I+R I + + V+ L G++A+LVGG
Sbjct: 9 CRKVLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGG 68
Query: 90 VRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSFE---- 145
VRDLLL + PKDFDV T A +Q+R+ F ++GRRF + V +IEV++F
Sbjct: 69 VRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHE 128
Query: 146 -TVAKHG---EGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYAN 201
V+ G+ +LL +G E D R RDFTINSL++ + DY
Sbjct: 129 GNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQR------RDFTINSLYYSVADFTVRDYVG 182
Query: 202 GISDLRCLKLRTLIPAYLSFTED 224
G+ DL+ +R + + ED
Sbjct: 183 GMKDLKDGVIRLIGNPETRYRED 205
>TIGR_CMR|CPS_4215 [details] [associations]
symbol:CPS_4215 "tRNA nucleotidyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004810 "tRNA
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] HAMAP:MF_01261 HAMAP:MF_01262
InterPro:IPR002646 InterPro:IPR003607 InterPro:IPR006674
InterPro:IPR012006 Pfam:PF01743 Pfam:PF01966 PIRSF:PIRSF000813
SMART:SM00471 GO:GO:0005524 GO:GO:0046872 GO:GO:0003723
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0042245 GO:GO:0008081
eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 HOGENOM:HOG000007368 OMA:LVSDQHQ
RefSeq:YP_270865.1 ProteinModelPortal:Q47WF7 STRING:Q47WF7
GeneID:3523071 KEGG:cps:CPS_4215 PATRIC:21471291
BioCyc:CPSY167879:GI48-4225-MONOMER Uniprot:Q47WF7
Length = 445
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 60/209 (28%), Positives = 94/209 (44%)
Query: 76 LKSQGFQAYLVGGCVRDLLLRRVPKDFD-VITTANLKQ-IRRQFHRSEIIGRRFPICRVH 133
+K+ +YLVGG VRD LL R KD D ++ A+++Q I+ +H+ +G+ FP+ +H
Sbjct: 8 IKNSELNSYLVGGAVRDKLLNRPIKDEDYLVVGASIEQMIKLGYHQ---VGKDFPVF-LH 63
Query: 134 IKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDPFL 193
K E + T K G+G P E DL+R RD T+N++ D
Sbjct: 64 PKTKA-EYALARTERKQGQGYTGFSCYFAPDVTIEQDLLR------RDLTVNAMAMD-HN 115
Query: 194 NKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXXXXXXXXXXXXXSFCKDIDTAMHSL 253
KI D NG +DL LR + A++ + + T M +
Sbjct: 116 GKIIDPYNGQNDLNDRILRHVSDAFIEDPLRVLRVARFAARYHKYGFTIADETLTLMQEI 175
Query: 254 SSS--IERLDKSRIMMELNYMLSYGAAES 280
S+S ++ L R+ E+ L+ G A S
Sbjct: 176 SASGELKCLTPERVWQEMQLSLADGGANS 204
>UNIPROTKB|F1NMW8 [details] [associations]
symbol:TRNT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009022 "tRNA nucleotidyltransferase activity"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA] [GO:0004810
"tRNA adenylyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0042780 "tRNA 3'-end processing" evidence=IEA]
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022
PANTHER:PTHR13734:SF11 EMBL:AADN02014470 IPI:IPI00601500
Ensembl:ENSGALT00000028052 OMA:HEKETIE Uniprot:F1NMW8
Length = 157
Score = 127 (49.8 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 72 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 131
V ++ + + ++ + GG VRDLL P+D D TTA +Q++ F + G R
Sbjct: 2 VSELFEKKNYELRIAGGAVRDLLSGMTPQDVDFATTATPEQMKDMFTSA---GVRL---- 54
Query: 132 VHIKGSVIEVSSFETVAKHGEGKE--TVLLSQIPYGCD-EIDLVR-W-RNSIHRDFTINS 186
++ KG E T H + E T+ + + G E++ W +++ RD T+NS
Sbjct: 55 INNKG---EKHGTITARLHEQNFEITTLRIDIVTDGRHAEVEFTTDWEKDAERRDLTVNS 111
Query: 187 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
+F +YD+ NG DL+ K+R + A ED
Sbjct: 112 MFLG-LDGMLYDFFNGYEDLKNKKIRFVGKASARIQED 148
>TIGR_CMR|NSE_0646 [details] [associations]
symbol:NSE_0646 "polyA polymerase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006396
"RNA processing" evidence=ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=ISS] InterPro:IPR002646 InterPro:IPR026973
Pfam:PF01743 GO:GO:0005739 GO:GO:0005524 GO:GO:0003723
EMBL:CP000237 GenomeReviews:CP000237_GR eggNOG:COG0617
GO:GO:0042780 KO:K00970 GO:GO:0009022 HOGENOM:HOG000253345
PANTHER:PTHR13734:SF11 RefSeq:YP_506524.1 ProteinModelPortal:Q2GDC2
STRING:Q2GDC2 GeneID:3931972 KEGG:nse:NSE_0646 PATRIC:22681319
OMA:YLWRESS ProtClustDB:CLSK749643
BioCyc:NSEN222891:GHFU-660-MONOMER Uniprot:Q2GDC2
Length = 392
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 53/214 (24%), Positives = 93/214 (43%)
Query: 72 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEII----GRRF 127
+++I+++ G +A VGGCVRD LL R D D+ TT ++ R + ++ G +
Sbjct: 14 LVQIIRNNGGEARFVGGCVRDQLLGRKISDIDLATTLKPEEAIRALKTNGLVTIPTGLKH 73
Query: 128 PICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHR-DFTINS 186
V + IE+++ H +G+ + + D W+ R DFT N+
Sbjct: 74 GTFTVLVNSRPIEITTLRQDL-HCDGRHAT----VSF-TDS-----WKEDAQRRDFTFNA 122
Query: 187 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXXXXXXXXXXXXXSFCKD- 245
++ D I+DY +G+ DL+ +L+ + + ED S CK
Sbjct: 123 MYID-IEGNIHDYFSGLEDLQNRRLKFVGEPHQRIEED----YLRILRAFRFQASICKTP 177
Query: 246 -IDTAMHSLSS---SIERLDKSRIMMELNYMLSY 275
+ +H+ + I L RI E+ +LSY
Sbjct: 178 LSEEILHACTKYRKKISSLSGERIQGEMFKLLSY 211
>ZFIN|ZDB-GENE-040625-176 [details] [associations]
symbol:trnt1 "tRNA nucleotidyl transferase,
CCA-adding, 1" species:7955 "Danio rerio" [GO:0042780 "tRNA 3'-end
processing" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009022
"tRNA nucleotidyltransferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743
ZFIN:ZDB-GENE-040625-176 GO:GO:0005739 GO:GO:0003723 KO:K00974
GO:GO:0042780 GO:GO:0009022 CTD:51095 HOVERGEN:HBG061403
PANTHER:PTHR13734:SF11 EMBL:BC071337 IPI:IPI00771442
RefSeq:NP_001002159.1 UniGene:Dr.84190 ProteinModelPortal:Q6IQR7
SMR:Q6IQR7 GeneID:415249 KEGG:dre:415249 InParanoid:Q6IQR7
NextBio:20818912 Uniprot:Q6IQR7
Length = 405
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/157 (30%), Positives = 73/157 (46%)
Query: 74 KILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVH 133
+I + F+ + GG VRDLL + P+D D TTA ++++ F + G R ++
Sbjct: 21 EIFQKNQFELRIAGGAVRDLLSGKRPEDVDFATTATPEEMKTMFQTA---GVRM----IN 73
Query: 134 IKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD----EIDLVR-W-RNSIHRDFTINSL 187
KG E T H E E L ++ D E++ W +++ RD TINS+
Sbjct: 74 NKG---EKHGTITARLHEENFEVTTL-RVDVQTDGRHAEVEFTTDWQKDAERRDLTINSM 129
Query: 188 FFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
F +YDY G DL+ K+R + A L ED
Sbjct: 130 FLG-LDGTLYDYFQGYEDLKNRKVRFVGSASLRIQED 165
>TIGR_CMR|BA_1559 [details] [associations]
symbol:BA_1559 "polyA polymerase" species:198094 "Bacillus
anthracis str. Ames" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] HAMAP:MF_01263 InterPro:IPR002646
InterPro:IPR023068 Pfam:PF01743 GO:GO:0005524 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
GO:GO:0042245 eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928
GO:GO:0052927 GO:GO:0004810 GO:GO:0001680 RefSeq:NP_844009.1
RefSeq:YP_018182.1 RefSeq:YP_027715.1 ProteinModelPortal:Q81ST6
DNASU:1086405 EnsemblBacteria:EBBACT00000009983
EnsemblBacteria:EBBACT00000015215 EnsemblBacteria:EBBACT00000020653
GeneID:1086405 GeneID:2815636 GeneID:2850380 KEGG:ban:BA_1559
KEGG:bar:GBAA_1559 KEGG:bat:BAS1446 HOGENOM:HOG000253346
OMA:YALLLYN ProtClustDB:PRK13299
BioCyc:BANT260799:GJAJ-1520-MONOMER
BioCyc:BANT261594:GJ7F-1583-MONOMER GO:GO:0016437
InterPro:IPR026007 PANTHER:PTHR13734:SF5 Uniprot:Q81ST6
Length = 397
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 51/203 (25%), Positives = 89/203 (43%)
Query: 72 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 131
+++ LK QG +AY VGG VRDL++ R D D+ T+A +++ F R +G
Sbjct: 10 IIETLKQQGHEAYFVGGSVRDLIIDRPIGDIDIATSALPEEVMAIFPRHVPVGLEHGTVI 69
Query: 132 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDP 191
V G EV++F T +++ + + + Q +E DL R RDFT+N++
Sbjct: 70 VVENGEPYEVTTFRTESEYEDFRRPSSV-QFVRSLEE-DLKR------RDFTMNAIAMTE 121
Query: 192 FLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXXXXXXXXXXXXXSFCKDIDTAMH 251
++ D G ++ ++ T+ A F ED S A+
Sbjct: 122 E-GEMVDLFAGQEAIQKREIVTVGNAADRFQEDALRMMRGIRFVSTLGFSLETKTKQAIE 180
Query: 252 SLSSSIERLDKSRIMMELNYMLS 274
+ +E + RI +E +L+
Sbjct: 181 TYGHLLEHIAIERITVEFEKLLT 203
>UNIPROTKB|Q1RML6 [details] [associations]
symbol:TRNT1 "tRNA nucleotidyl transferase, CCA-adding, 1"
species:9913 "Bos taurus" [GO:0042780 "tRNA 3'-end processing"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004810 "tRNA adenylyltransferase
activity" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0009022 "tRNA nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 eggNOG:COG0617 KO:K00974 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022 CTD:51095
HOGENOM:HOG000253345 HOVERGEN:HBG061403 OMA:CELLKYQ
OrthoDB:EOG4PK27R PANTHER:PTHR13734:SF11 EMBL:DAAA02053908
EMBL:BC114831 IPI:IPI00696752 RefSeq:NP_001039341.1
UniGene:Bt.102078 SMR:Q1RML6 STRING:Q1RML6
Ensembl:ENSBTAT00000026029 GeneID:407144 KEGG:bta:407144
InParanoid:Q1RML6 NextBio:20818408 Uniprot:Q1RML6
Length = 434
Score = 127 (49.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 48/146 (32%), Positives = 68/146 (46%)
Query: 85 LVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSF 144
+ GG VRDLL P+D D TTA Q++ F + +G R ++ KG E
Sbjct: 61 IAGGAVRDLLSGVKPQDVDFATTATPAQMKELF---QSVGIRM----INNKG---EKHGT 110
Query: 145 ETVAKHGEGKETVLLSQIPYGCD----EIDLVR-W-RNSIHRDFTINSLFFDPFLNKIYD 198
T H E E L +I D E++ W +++ RD TINS+F F ++D
Sbjct: 111 ITARLHEENFEITTL-RIDVATDGRHAEVEFTTDWQKDAERRDLTINSMFLG-FDGTLFD 168
Query: 199 YANGISDLRCLKLRTLIPAYLSFTED 224
Y NG DL+ K+R + A ED
Sbjct: 169 YFNGYEDLKNKKVRFVGQAKQRIQED 194
>FB|FBgn0037369 [details] [associations]
symbol:CG2100 species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009022 "tRNA
nucleotidyltransferase activity" evidence=IEA] [GO:0042780 "tRNA
3'-end processing" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743
EMBL:AE014297 GO:GO:0005739 GO:GO:0022008 GO:GO:0003723 KO:K00974
GeneTree:ENSGT00390000009678 GO:GO:0004652 GO:GO:0042780
GO:GO:0009022 OMA:CELLKYQ PANTHER:PTHR13734:SF11 HSSP:Q96Q11
FlyBase:FBgn0037369 ChiTaRS:CG2100 EMBL:AY058485
RefSeq:NP_001163512.1 RefSeq:NP_649578.1 UniGene:Dm.28328
SMR:Q9VNH2 IntAct:Q9VNH2 STRING:Q9VNH2 EnsemblMetazoa:FBtr0078724
EnsemblMetazoa:FBtr0301574 GeneID:40707 KEGG:dme:Dmel_CG2100
UCSC:CG2100-RA InParanoid:Q9VNH2 GenomeRNAi:40707 NextBio:820165
Uniprot:Q9VNH2
Length = 477
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 72 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 131
++ + K ++ + GG VRD+L+ PKD D+ TTA Q+++ F + E+ R
Sbjct: 79 LVALFKKYDYELRIAGGAVRDILMGIPPKDIDLATTATPDQMKQMFEKEEV---RMINAN 135
Query: 132 VHIKGSVI----EVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWR-NSIHRDFTINS 186
G++ + +FE + + +++ Y D W+ ++ RD TINS
Sbjct: 136 GEKHGTITPRINDKENFEVTTLRIDIRTDGRHAEVMYTTD------WQLDANRRDLTINS 189
Query: 187 LFFDPFLNKIYDYANGISDLR 207
+F F +YDY G DL+
Sbjct: 190 MFLG-FDGTVYDYFYGYDDLQ 209
>UNIPROTKB|F1SFL7 [details] [associations]
symbol:TRNT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042780 "tRNA 3'-end processing" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004810 "tRNA adenylyltransferase activity"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA] [GO:0009022
"tRNA nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022
OMA:CELLKYQ PANTHER:PTHR13734:SF11 EMBL:CU914461 EMBL:CU468616
Ensembl:ENSSSCT00000012619 Uniprot:F1SFL7
Length = 434
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 47/157 (29%), Positives = 72/157 (45%)
Query: 74 KILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVH 133
++ + + + GG VRDLL P+D D TTA Q++ F + +G R ++
Sbjct: 50 ELFVKENHELRIAGGAVRDLLSGVKPQDVDFATTATPVQMKELF---QSVGIRM----IN 102
Query: 134 IKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD----EIDLVR-W-RNSIHRDFTINSL 187
KG E T H E E L ++ D E++ W +++ RD TINS+
Sbjct: 103 NKG---EKHGTITARLHEENFEITTL-RVDVATDGRHAEVEFTTDWQKDAERRDLTINSM 158
Query: 188 FFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
F F ++DY NG DL+ K+R + A ED
Sbjct: 159 FLG-FDGTLFDYFNGYEDLKNKKVRFVGQAKQRIQED 194
>MGI|MGI:1917297 [details] [associations]
symbol:Trnt1 "tRNA nucleotidyl transferase, CCA-adding, 1"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001680 "tRNA 3'-terminal CCA addition" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004810 "tRNA
adenylyltransferase activity" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;ISA;IDA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0009022 "tRNA
nucleotidyltransferase activity" evidence=ISO] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0042780 "tRNA
3'-end processing" evidence=ISO] [GO:0052927 "CTP:tRNA
cytidylyltransferase activity" evidence=IEA] [GO:0052928
"CTP:3'-cytidine-tRNA cytidylyltransferase activity" evidence=IEA]
[GO:0052929 "ATP:3'-cytidine-cytidine-tRNA adenylyltransferase
activity" evidence=IEA] InterPro:IPR002646 InterPro:IPR026973
Pfam:PF01743 MGI:MGI:1917297 GO:GO:0005739 GO:GO:0005524
GO:GO:0005813 GO:GO:0000049 eggNOG:COG0617 KO:K00974 GO:GO:0052929
GO:GO:0052928 GO:GO:0052927 GO:GO:0004810 GO:GO:0001680
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022 CTD:51095
HOGENOM:HOG000253345 HOVERGEN:HBG061403 OMA:CELLKYQ
OrthoDB:EOG4PK27R PANTHER:PTHR13734:SF11 EMBL:AB063106
EMBL:AK011764 EMBL:AK135791 EMBL:AK152739 EMBL:AK166804
EMBL:BC031764 IPI:IPI00187402 IPI:IPI00651932 RefSeq:NP_001229287.1
RefSeq:NP_001229289.1 RefSeq:NP_081572.1 UniGene:Mm.196332
ProteinModelPortal:Q8K1J6 SMR:Q8K1J6 STRING:Q8K1J6
PhosphoSite:Q8K1J6 PaxDb:Q8K1J6 PRIDE:Q8K1J6
Ensembl:ENSMUST00000057578 Ensembl:ENSMUST00000113247
Ensembl:ENSMUST00000113248 Ensembl:ENSMUST00000113249 GeneID:70047
KEGG:mmu:70047 UCSC:uc009dcy.1 InParanoid:Q8K1J6 NextBio:330891
Bgee:Q8K1J6 CleanEx:MM_TRNT1 Genevestigator:Q8K1J6
GermOnline:ENSMUSG00000013736 Uniprot:Q8K1J6
Length = 434
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 48/157 (30%), Positives = 72/157 (45%)
Query: 74 KILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVH 133
++ + + + GG VRDLL P+D D TTA Q++ F + G R ++
Sbjct: 50 ELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQMKEMFQSA---GIRM----IN 102
Query: 134 IKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD----EIDLVR-W-RNSIHRDFTINSL 187
KG E T H E E L +I D E++ W +++ RD TINS+
Sbjct: 103 NKG---EKHGTITARLHEENFEVTTL-RIDVTTDGRHAEVEFTTDWQKDAERRDLTINSM 158
Query: 188 FFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
F F ++DY NG +DL+ K+R + A ED
Sbjct: 159 FLG-FDGTLFDYFNGYADLKNKKVRFVGHAKQRIQED 194
>RGD|1308857 [details] [associations]
symbol:Trnt1 "tRNA nucleotidyl transferase, CCA-adding, 1"
species:10116 "Rattus norvegicus" [GO:0000049 "tRNA binding"
evidence=IEA;ISO] [GO:0004810 "tRNA adenylyltransferase activity"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0009022 "tRNA
nucleotidyltransferase activity" evidence=IEA] [GO:0042780 "tRNA
3'-end processing" evidence=IEA;ISO] InterPro:IPR002646
InterPro:IPR026973 Pfam:PF01743 RGD:1308857 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 eggNOG:COG0617 KO:K00974 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022 CTD:51095
HOGENOM:HOG000253345 HOVERGEN:HBG061403 OMA:CELLKYQ
OrthoDB:EOG4PK27R PANTHER:PTHR13734:SF11 EMBL:BC095841
EMBL:BC105612 IPI:IPI00188677 RefSeq:NP_001019432.1
UniGene:Rn.159746 SMR:Q4VBH2 STRING:Q4VBH2
Ensembl:ENSRNOT00000008526 GeneID:312616 KEGG:rno:312616
UCSC:RGD:1308857 InParanoid:Q4VBH2 NextBio:665037
Genevestigator:Q4VBH2 Uniprot:Q4VBH2
Length = 434
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 47/157 (29%), Positives = 72/157 (45%)
Query: 74 KILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVH 133
++ + + + GG VRDLL P+D D TTA +++ F + G R ++
Sbjct: 50 ELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTEMKEMFQAA---GIRM----IN 102
Query: 134 IKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD----EIDLVR-W-RNSIHRDFTINSL 187
KG E T H E E L +I D E++ W +++ RD TINS+
Sbjct: 103 NKG---EKHGTITARLHEENFEVTTL-RIDVSTDGRHAEVEFTTDWQKDAERRDLTINSM 158
Query: 188 FFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
F F ++DY NG +DL+ K+R + A ED
Sbjct: 159 FLG-FDGTLFDYFNGYADLKNKKVRFVGHAKQRIQED 194
>UNIPROTKB|E2R8M0 [details] [associations]
symbol:TRNT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042780 "tRNA 3'-end processing"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004810 "tRNA adenylyltransferase
activity" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0009022 "tRNA nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 KO:K00974 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022 CTD:51095
OMA:CELLKYQ PANTHER:PTHR13734:SF11 EMBL:AAEX03012103
RefSeq:XP_533758.3 Ensembl:ENSCAFT00000009663 GeneID:476552
KEGG:cfa:476552 Uniprot:E2R8M0
Length = 436
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 47/156 (30%), Positives = 72/156 (46%)
Query: 74 KILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVH 133
++ + + + GG VRDLL P+D D TTA Q++ F + G R ++
Sbjct: 50 ELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPAQMKDMFQSA---GIRM----IN 102
Query: 134 IKGSVIEVSSFETVAKHGEGKE--TVLLSQIPYGCD-EIDLVR-W-RNSIHRDFTINSLF 188
KG E T H E E T+ + + G E++ W +++ RD TINS+F
Sbjct: 103 NKG---EKHGTITARLHEENFEITTLRIDVVTDGRHAEVEFTTDWQKDAERRDLTINSMF 159
Query: 189 FDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
F ++DY NG DL+ K+R + A ED
Sbjct: 160 LG-FDGTLFDYFNGYEDLKNKKVRFVGNAKQRIQED 194
>TIGR_CMR|APH_1216 [details] [associations]
symbol:APH_1216 "polyA polymerase/tRNA
nucleotidyltransferase family protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=ISS] InterPro:IPR001878
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 SMART:SM00343
GO:GO:0005739 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
EMBL:CP000235 GenomeReviews:CP000235_GR eggNOG:COG0617
GO:GO:0042780 KO:K00970 GO:GO:0009022 HOGENOM:HOG000253345
PANTHER:PTHR13734:SF11 ProtClustDB:CLSK749643 OMA:RAFRFHA
RefSeq:YP_505747.1 ProteinModelPortal:Q2GIQ4 STRING:Q2GIQ4
GeneID:3931093 KEGG:aph:APH_1216 PATRIC:20951216
BioCyc:APHA212042:GHPM-1221-MONOMER Uniprot:Q2GIQ4
Length = 409
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 49/159 (30%), Positives = 72/159 (45%)
Query: 72 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 131
++++L+S LVGGCVRD +++R D D+ T K + + I + P
Sbjct: 14 IIRVLESFNGSVRLVGGCVRDSIIQRETTDIDLATDLLPKTVLTSLKAAGI--KAIPTGM 71
Query: 132 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD--EIDLV---RWR-NSIHRDFTIN 185
H G+V V VA G E L ++ CD +V W ++ RDFT N
Sbjct: 72 QH--GTVTAV-----VA--GVPYEITTL-RLDTKCDGRHASVVFTDNWEADASRRDFTFN 121
Query: 186 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
+L+ D KIYDY GI DL+ + + A ED
Sbjct: 122 ALYCDKN-GKIYDYFTGIRDLQSRTVAFIGDAEQRINED 159
>UNIPROTKB|Q96Q11 [details] [associations]
symbol:TRNT1 "CCA tRNA nucleotidyltransferase 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0009022 "tRNA
nucleotidyltransferase activity" evidence=IEA] [GO:0001680 "tRNA
3'-terminal CCA addition" evidence=IEA] [GO:0052927 "CTP:tRNA
cytidylyltransferase activity" evidence=IEA] [GO:0052928
"CTP:3'-cytidine-tRNA cytidylyltransferase activity" evidence=IEA]
[GO:0052929 "ATP:3'-cytidine-cytidine-tRNA adenylyltransferase
activity" evidence=IEA] [GO:0004810 "tRNA adenylyltransferase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=TAS]
[GO:0000049 "tRNA binding" evidence=IDA] [GO:0042780 "tRNA 3'-end
processing" evidence=IDA] [GO:0006626 "protein targeting to
mitochondrion" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR002646 InterPro:IPR026973
Pfam:PF01743 EMBL:AB063105 GO:GO:0005739 GO:GO:0005524
GO:GO:0005813 GO:GO:0006626 EMBL:CH471055 GO:GO:0000049
eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 EMBL:AC024060 GO:GO:0042780
GO:GO:0009022 EMBL:AF151805 EMBL:AK290411 EMBL:AL834397
EMBL:BC005184 EMBL:BC012537 IPI:IPI00289807 IPI:IPI00301719
IPI:IPI00305221 RefSeq:NP_886552.2 UniGene:Hs.732725 PDB:1OU5
PDBsum:1OU5 ProteinModelPortal:Q96Q11 SMR:Q96Q11 IntAct:Q96Q11
STRING:Q96Q11 PhosphoSite:Q96Q11 DMDM:296452848 PaxDb:Q96Q11
PRIDE:Q96Q11 DNASU:51095 Ensembl:ENST00000251607
Ensembl:ENST00000280591 Ensembl:ENST00000339437
Ensembl:ENST00000402675 Ensembl:ENST00000420393
Ensembl:ENST00000434583 GeneID:51095 KEGG:hsa:51095 UCSC:uc003bpp.4
UCSC:uc010hbv.3 CTD:51095 GeneCards:GC03P003168 HGNC:HGNC:17341
HPA:HPA036938 MIM:612907 neXtProt:NX_Q96Q11 PharmGKB:PA38446
HOGENOM:HOG000253345 HOVERGEN:HBG061403 InParanoid:Q96Q11
OMA:CELLKYQ OrthoDB:EOG4PK27R PhylomeDB:Q96Q11 BRENDA:2.7.7.21
EvolutionaryTrace:Q96Q11 GenomeRNAi:51095 NextBio:53789
ArrayExpress:Q96Q11 Bgee:Q96Q11 CleanEx:HS_TRNT1
Genevestigator:Q96Q11 GermOnline:ENSG00000072756
PANTHER:PTHR13734:SF11 Uniprot:Q96Q11
Length = 434
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 47/157 (29%), Positives = 70/157 (44%)
Query: 74 KILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVH 133
++ + + + GG VRDLL P+D D TTA Q++ F + G R R
Sbjct: 50 ELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQMKEMFQSA---GIRMINNRGE 106
Query: 134 IKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD----EIDLVR-W-RNSIHRDFTINSL 187
G++ T H E E L +I D E++ W +++ RD TINS+
Sbjct: 107 KHGTI-------TARLHEENFEITTL-RIDVTTDGRHAEVEFTTDWQKDAERRDLTINSM 158
Query: 188 FFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTED 224
F F ++DY NG DL+ K+R + A ED
Sbjct: 159 FLG-FDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQED 194
>TIGR_CMR|ECH_1116 [details] [associations]
symbol:ECH_1116 "polyA polymerase/tRNA
nucleotidyltransferase family protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0006396 "RNA processing"
evidence=ISS] [GO:0016779 "nucleotidyltransferase activity"
evidence=ISS] InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743
GO:GO:0005739 GO:GO:0005524 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003723 eggNOG:COG0617 GO:GO:0042780 KO:K00970 GO:GO:0009022
HOGENOM:HOG000253345 PANTHER:PTHR13734:SF11 ProtClustDB:CLSK749643
RefSeq:YP_507900.1 ProteinModelPortal:Q2GF83 STRING:Q2GF83
GeneID:3927017 KEGG:ech:ECH_1116 PATRIC:20577564 OMA:RAFRFHA
BioCyc:ECHA205920:GJNR-1119-MONOMER Uniprot:Q2GF83
Length = 401
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 64/213 (30%), Positives = 85/213 (39%)
Query: 71 VVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPIC 130
++ I K QG LVGGCVRD LL+R D D TT Q + I + P
Sbjct: 14 IINAIKKFQG-DIRLVGGCVRDSLLKRQTIDIDFATTLLPNQTINALTAAHI--KAIPTG 70
Query: 131 RVHIKGSVIEVSSFETVAKHGEGKE-TVLLSQIPYGCD----EIDLVR-WR-NSIHRDFT 183
H G++ T + E T L S I CD E+ W+ ++ RDFT
Sbjct: 71 IKH--GTI-------TALVNNTAYEITTLRSDI--SCDGRHAEVKFTNNWQQDASRRDFT 119
Query: 184 INSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCXXXXXXXXXXXXXXXSFC 243
N+L+ D +YDY +GI DL L + + ED S
Sbjct: 120 FNALYCDE-KGIVYDYFSGIQDLEKKHLNFIGDPEIRIQED-YLRILRAFRFYASICSQN 177
Query: 244 KDIDTAMHSL---SSSIERLDKSRIMMELNYML 273
K D +HS SS I L + RI E +L
Sbjct: 178 KLSDEIVHSCTKYSSYINNLSRERIRDEFFKLL 210
>TIGR_CMR|DET_0409 [details] [associations]
symbol:DET_0409 "polyA polymerase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=ISS] InterPro:IPR002646 Pfam:PF01743
GO:GO:0005524 GO:GO:0003723 GO:GO:0006396 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0617 KO:K00974 GO:GO:0016779
RefSeq:YP_181154.1 ProteinModelPortal:Q3Z9E5 STRING:Q3Z9E5
GeneID:3230288 KEGG:det:DET0409 PATRIC:21607887
HOGENOM:HOG000275430 OMA:WAHFLAS ProtClustDB:CLSK837513
BioCyc:DETH243164:GJNF-409-MONOMER Uniprot:Q3Z9E5
Length = 418
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 46/158 (29%), Positives = 72/158 (45%)
Query: 74 KILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSE----IIGRRFPI 129
++ SQ YLVGG VRD LL + PKD D++ TAN + + + + RF
Sbjct: 27 ELAASQEASLYLVGGLVRDCLLDKTPKDADLVITANAIRFGQDLLQGTSYKTTLHHRFGN 86
Query: 130 CRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFF 189
I G +++++ + GK L ++ G + DL R RDF IN++
Sbjct: 87 LSADINGFKLDITTARSEVYPAPGK----LPEVGAGDIKADLFR------RDFKINAMAI 136
Query: 190 DPFLNK---IYDYANGISDLRCLKLRTLIPAYLSFTED 224
+ D +G++DL+ KL L P SF +D
Sbjct: 137 SLSQQNSGCLVDPYDGLTDLKQGKLSVLHPK--SFQDD 172
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 686 622 0.00090 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 621 (66 KB)
Total size of DFA: 346 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.39u 0.11s 51.50t Elapsed: 00:00:03
Total cpu time: 51.40u 0.11s 51.51t Elapsed: 00:00:03
Start: Thu May 9 16:39:12 2013 End: Thu May 9 16:39:15 2013