Citrus Sinensis ID: 005650

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680------

MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKVNLFKHFIRSNRLARHVQQWRCCRECGGAYV

cccccEEEEEccEEEEccEEEEccccccEEEccccccccccEEEEccccccccccEEEEccccccccEEEEEEEccccccccccccccccccccEEEEEEccccccccccccccEEEEEEEEEcccEEEEEEccccccEEEEEEccccccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHcccccccEEEEEccccccccccccccHHHHHHccccHHccccccccccHHHcccccccccccHHHHHHHHHcccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEcccHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccEEEEcccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHcccccccccccccccccccccccccccccccEEEEEccccccEEEEEEcccccEEEEEccccccccccccEEEEEEccccccHHHcccccccccEEEEEEcccEEEEccccccEEEEEEcccEEEEEEEEEEEEccccccccHHHHHHcccEEEEEccccccc

ccccccEEEcccEEEEccEEEEccccccEEEEcccccccccEEEEEEccccccccEEEEcccccccEEEEEEEEEEEHHccccccccccccHcEEEEEEEccccccccccccccEEEEEEEEEcccEEEEEEcccccEEEEEEEccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccHHHHccccHHHHccccccHHHHHccccHHHHHHHHHHHHHcccccEEEEEEccccEccccccccccccccccHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEHHHccccccccccccHHHcccEEEccccccccccccccccHcHHcccccccccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEHcccccHHHccccccEEEEccccccccccccccHHHHHHHHHHHHHHccEcccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccccEEEcccccccccHHccccccccccEEEEEEEcccccEEEEEEEccccccccccccccccccccccEEEEEcHHHcccccccccccccccEEEEEEcccEEEEccccccEEEEEccccEEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHcccccc

mtvapnisisdgnlvvhgktiltgvpdniiltpgngvgLVAGAFIGAtashskslhvfpmgvleDLRFMCCFRFKLWWMTqrmgtcgkdvpleTQFMLVeskdnsesdqddgptiyTVFLPLLEGQfrsalqgnennEIEICLesgdnavetNQGLYLVYthagpnpfEVISQAVKAVEKYMQTFTHrekkklpsfldwfgwctwdafytDVTAEGVDEGlkslsaggtppkfliiddgwqqienkpkeesnciVQEGAQFASRLTGIKENSKFQKkcqnseqvsgLKHVVDeskqnhnvKYVYVWHALAGywggvkpaadgmehydtalaypvtspgvmgnqpdiVMDSLAVhglglvhpkkvFNFYNELHAYLASCGVDGVKVDVQNIIETlgaghggrvsLTRSYHQALEASIarnfpdngciscmchntdgiysskqtavirasddyyprdpashtihiSSVAYNTLFlgefmqpdwdmfhslhpaaeyhgaaravggcaiyvsdkpgnhnfDLLRKLvlpdgsvlraqlpgrptrdclfadpardgtslLKVWNVNkcsgvvgvfncqgagwckitkktrihdespgtltasVRVTDVENMAQIAGAGWNGDAIVYAHrsgevvrlpkgasvpVTLKVLEYELfhfcplkvnlfkhfirsnrlaRHVQQWRCcrecggayv

mtvapnisisdgnlvVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESkdnsesdqddgPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETlgaghggrvSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRaqlpgrptrdcLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKItkktrihdespgtltasvrVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKVNLFKHFIRSNRLARHVQQWRCCRECGGAYV

********ISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLV**************TIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQI*********CIVQ****************************************NHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKVNLFKHFIRSNRLARHVQQWRCCRECGGA**

****PNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAF************VFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKA**************KLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK*******************HVVDESKQNHNVKYVYVWHALAGYWGGVKPAADG**HYDT*LAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKVNLFKHFIR********QQWRCCRECGGA**

MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVE**********DGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE***************GLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKVNLFKHFIRSNRLARHVQQWRCCRECGGAYV

**VAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKVNLFKHFIRSNRLARHVQQWRCCRECGGAYV

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		686	2.2.26 [Sep-21-2011]
Q94A08		773	Probable galactinol--sucr	yes	no	0.953	0.846	0.825	0.0
Q84VX0		754	Probable galactinol--sucr	no	no	0.953	0.867	0.634	0.0
Q8RX87		749	Probable galactinol--sucr	no	no	0.940	0.861	0.581	0.0
Q9FND9		783	Probable galactinol--sucr	no	no	0.937	0.821	0.391	1e-138
Q5VQG4		783	Galactinol--sucrose galac	no	no	0.928	0.813	0.398	1e-137
Q8VWN6		798	Galactinol--sucrose galac	N/A	no	0.938	0.807	0.369	1e-129
Q93XK2		853	Stachyose synthase OS=Pis	N/A	no	0.874	0.703	0.324	1e-102
Q9SYJ4		876	Probable galactinol--sucr	no	no	0.510	0.399	0.377	8e-71
Q97U94		648	Alpha-galactosidase OS=Su	yes	no	0.567	0.600	0.279	4e-36

>sp\|Q94A08\|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2	Back alignment and function desciption

 Score = 1163 bits (3009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/655 (82%), Positives = 592/655 (90%), Gaps = 1/655 (0%)

Query: 1   MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPM 60
           MT+  NIS+ + NLVV GKTILT +PDNIILTP  G G V+G+FIGAT   SKSLHVFP+
Sbjct: 1   MTITSNISVQNDNLVVQGKTILTKIPDNIILTPVTGNGFVSGSFIGATFEQSKSLHVFPI 60

Query: 61  GVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFL 120
           GVLE LRFMCCFRFKLWWMTQRMG+CGKD+PLETQFML+ESKD  E + DD PT+YTVFL
Sbjct: 61  GVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGNGDDAPTVYTVFL 120

Query: 121 PLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEK 180
           PLLEGQFR+ LQGNE NEIEIC ESGD AVET+QG +LVY HAG NPFEVI Q+VKAVE+
Sbjct: 121 PLLEGQFRAVLQGNEKNEIEICFESGDKAVETSQGTHLVYVHAGTNPFEVIRQSVKAVER 180

Query: 181 YMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGW 240
           +MQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS GGTPPKFLIIDDGW
Sbjct: 181 HMQTFHHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGW 240

Query: 241 QQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNV 300
           QQIENK K+E NC+VQEGAQFA+RL GIKEN+KFQK  Q   QVSGLK VVD +KQ HNV
Sbjct: 241 QQIENKEKDE-NCVVQEGAQFATRLVGIKENAKFQKSDQKDTQVSGLKSVVDNAKQRHNV 299

Query: 301 KYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVH 360
           K VY WHALAGYWGGVKPAA GMEHYD+ALAYPV SPGV+GNQPDIVMDSLAVHGLGLV+
Sbjct: 300 KQVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVN 359

Query: 361 PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNF 420
           PKKVFNFYNELH+YLASCG+DGVKVDVQNIIETLGAG GGRVSLTRSY QALEASIARNF
Sbjct: 360 PKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNF 419

Query: 421 PDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPD 480
            DNGCISCMCHNTDG+YS+KQTA++RASDD+YPRDPASHTIHI+SVAYN+LFLGEFMQPD
Sbjct: 420 TDNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPD 479

Query: 481 WDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTR 540
           WDMFHSLHP AEYH AARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRA+LPGRPTR
Sbjct: 480 WDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAKLPGRPTR 539

Query: 541 DCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRV 600
           DCLFADPARDG SLLK+WN+NK +G+VGVFNCQGAGWCK TKK +IHD SPGTLT S+R 
Sbjct: 540 DCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRA 599

Query: 601 TDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLK 655
            D + ++Q+AG  W+GD+IVYA+RSGEVVRLPKGAS+P+TLKVLEYELFH  PLK
Sbjct: 600 DDADLISQVAGEDWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLK 654

Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 2

>sp\|Q84VX0\|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1	Back alignment and function description

>sp\|Q8RX87\|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2	Back alignment and function description

>sp\|Q9FND9\|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1	Back alignment and function description

>sp\|Q5VQG4\|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q8VWN6\|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q93XK2\|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1	Back alignment and function description

>sp\|Q9SYJ4\|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=3	Back alignment and function description

>sp\|Q97U94\|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		686
317106767		776	JMS10C05.2 [Jatropha curcas]	0.954	0.844	0.864	0.0
224138022		776	predicted protein [Populus trichocarpa]	0.953	0.842	0.868	0.0
297739679		792	unnamed protein product [Vitis vinifera]	0.953	0.825	0.847	0.0
225441787		774	PREDICTED: probable galactinol--sucrose	0.953	0.844	0.847	0.0
187941007		774	seed imbibition protein 1 [Vitis vinifer	0.953	0.844	0.846	0.0
356504797		750	PREDICTED: probable galactinol--sucrose	0.953	0.872	0.847	0.0
449463332		772	PREDICTED: probable galactinol--sucrose	0.953	0.847	0.833	0.0
449528103		772	PREDICTED: probable galactinol--sucrose	0.953	0.847	0.835	0.0
29838631		772	alkaline alpha galactosidase II [Cucumis	0.953	0.847	0.832	0.0
312282097		772	unnamed protein product [Thellungiella h	0.953	0.847	0.829	0.0

>gi\|317106767\|dbj\|BAJ53259.1\| JMS10C05.2 [Jatropha curcas]	Back alignment and taxonomy information

 Score = 1217 bits (3148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/656 (86%), Positives = 618/656 (94%), Gaps = 1/656 (0%)

Query: 1   MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPM 60
           MT+ P ISI+DG+LVVHGKTILTGVPDNI+LTPG+G GLVAGAFIGA+ASHSKSLHVFP+
Sbjct: 1   MTITPKISINDGSLVVHGKTILTGVPDNIVLTPGSGAGLVAGAFIGASASHSKSLHVFPV 60

Query: 61  GVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSES-DQDDGPTIYTVF 119
           GVLE LRFMCCFRFKLWWMTQRMG CGKD+PLETQFMLVES+D  E  DQDD  TIYTVF
Sbjct: 61  GVLEGLRFMCCFRFKLWWMTQRMGKCGKDIPLETQFMLVESRDGGEGVDQDDAQTIYTVF 120

Query: 120 LPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVE 179
           LPLLEGQFR+ LQGNENNE+EICLESGDNAVETNQGL+LVY HAG NPFEVI+QAVKAVE
Sbjct: 121 LPLLEGQFRAVLQGNENNEMEICLESGDNAVETNQGLHLVYMHAGTNPFEVINQAVKAVE 180

Query: 180 KYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG 239
           KYMQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGV+EGLKSLS GGTP +FLIIDDG
Sbjct: 181 KYMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPARFLIIDDG 240

Query: 240 WQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHN 299
           WQQIE+KPKE+SN +VQEGAQFASRLTGIKEN KFQK  + +E+ +GLK+VV+ +K+++N
Sbjct: 241 WQQIESKPKEDSNVVVQEGAQFASRLTGIKENEKFQKNDKKNEESTGLKYVVEHAKKDYN 300

Query: 300 VKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLV 359
           VKYVYVWHALAGYWGGVKPAA GMEHYDT LAYPV SPGV+GNQPDIVMDSL+VHGLGLV
Sbjct: 301 VKYVYVWHALAGYWGGVKPAAAGMEHYDTLLAYPVQSPGVLGNQPDIVMDSLSVHGLGLV 360

Query: 360 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 419
           HPKKVF+FYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN
Sbjct: 361 HPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 420

Query: 420 FPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQP 479
           FPDNGCI+CMCHNTDG+YS+KQTAV+RASDD+YPRDPASHT+HISSVAYNTLFLGEFMQP
Sbjct: 421 FPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTVHISSVAYNTLFLGEFMQP 480

Query: 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT 539
           DWDMFHSLHPAA+YH A RAVGGC IYVSDKPGNHNF+LL+KLVLPDGSVLRAQLPGRPT
Sbjct: 481 DWDMFHSLHPAADYHAAGRAVGGCPIYVSDKPGNHNFELLKKLVLPDGSVLRAQLPGRPT 540

Query: 540 RDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVR 599
           RDCLF DPARDGTSLLK+WNVNKC+GVVGVFNCQGAGWCK+ KKTRIHD SPGTLTASVR
Sbjct: 541 RDCLFVDPARDGTSLLKIWNVNKCTGVVGVFNCQGAGWCKVEKKTRIHDASPGTLTASVR 600

Query: 600 VTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLK 655
            TDV+ +AQIAG  WNG+ +VYA+RSGE++RLPKGASVPVTLKVLEYELFHFCP+K
Sbjct: 601 ATDVDCIAQIAGTDWNGETVVYAYRSGELIRLPKGASVPVTLKVLEYELFHFCPIK 656

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224138022\|ref\|XP_002322710.1\| predicted protein [Populus trichocarpa] gi\|222867340\|gb\|EEF04471.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297739679\|emb\|CBI29861.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225441787\|ref\|XP_002283653.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|187941007\|gb\|ACD39775.1\| seed imbibition protein 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356504797\|ref\|XP_003521181.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 2-like [Glycine max]	Back alignment and taxonomy information

>gi\|449463332\|ref\|XP_004149388.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 2-like [Cucumis sativus] gi\|91075914\|gb\|ABD52008.2\| alkaline alpha galactosidase [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449528103\|ref\|XP_004171046.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|29838631\|gb\|AAM75140.1\| alkaline alpha galactosidase II [Cucumis melo]	Back alignment and taxonomy information

>gi\|312282097\|dbj\|BAJ33914.1\| unnamed protein product [Thellungiella halophila]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		686
TAIR\|locus:2103488		773	SIP2 "AT3G57520" [Arabidopsis	0.953	0.846	0.825	3.7e-309
TAIR\|locus:2020452		754	SIP1 "AT1G55740" [Arabidopsis	0.951	0.866	0.636	6.7e-239
TAIR\|locus:2170528		783	SIP1 "AT5G40390" [Arabidopsis	0.935	0.819	0.395	2.2e-130
UNIPROTKB\|Q5VQG4		783	RFS "Galactinol--sucrose galac	0.928	0.813	0.398	1.1e-126
TAIR\|locus:2141425		876	STS "AT4G01970" [Arabidopsis t	0.510	0.399	0.377	9.1e-109
UNIPROTKB\|Q93XK2		853	STS1 "Stachyose synthase" [Pis	0.625	0.502	0.360	1.6e-70
ASPGD\|ASPL0000010056		863	aglF [Emericella nidulans (tax	0.389	0.309	0.308	8.2e-38
UNIPROTKB\|G4NBB7		908	MGG_11554 "Seed imbibition pro	0.432	0.327	0.311	1.8e-31
UNIPROTKB\|Q97U94		648	galS "Alpha-galactosidase" [Su	0.268	0.283	0.348	1.9e-31
UNIPROTKB\|Q8A170		693	BT_3797 "Possible alpha-galact	0.274	0.271	0.282	1.6e-22

TAIR\|locus:2103488 SIP2 "AT3G57520" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2966 (1049.1 bits), Expect = 3.7e-309, P = 3.7e-309
 Identities = 541/655 (82%), Positives = 592/655 (90%)

Query:     1 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPM 60
             MT+  NIS+ + NLVV GKTILT +PDNIILTP  G G V+G+FIGAT   SKSLHVFP+
Sbjct:     1 MTITSNISVQNDNLVVQGKTILTKIPDNIILTPVTGNGFVSGSFIGATFEQSKSLHVFPI 60

Query:    61 GVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFL 120
             GVLE LRFMCCFRFKLWWMTQRMG+CGKD+PLETQFML+ESKD  E + DD PT+YTVFL
Sbjct:    61 GVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGNGDDAPTVYTVFL 120

Query:   121 PLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEK 180
             PLLEGQFR+ LQGNE NEIEIC ESGD AVET+QG +LVY HAG NPFEVI Q+VKAVE+
Sbjct:   121 PLLEGQFRAVLQGNEKNEIEICFESGDKAVETSQGTHLVYVHAGTNPFEVIRQSVKAVER 180

Query:   181 YMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGW 240
             +MQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS GGTPPKFLIIDDGW
Sbjct:   181 HMQTFHHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGW 240

Query:   241 QQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNV 300
             QQIENK K+E NC+VQEGAQFA+RL GIKEN+KFQK  Q   QVSGLK VVD +KQ HNV
Sbjct:   241 QQIENKEKDE-NCVVQEGAQFATRLVGIKENAKFQKSDQKDTQVSGLKSVVDNAKQRHNV 299

Query:   301 KYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVH 360
             K VY WHALAGYWGGVKPAA GMEHYD+ALAYPV SPGV+GNQPDIVMDSLAVHGLGLV+
Sbjct:   300 KQVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVN 359

Query:   361 PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNF 420
             PKKVFNFYNELH+YLASCG+DGVKVDVQNIIETLGAG GGRVSLTRSY QALEASIARNF
Sbjct:   360 PKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNF 419

Query:   421 PDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPD 480
              DNGCISCMCHNTDG+YS+KQTA++RASDD+YPRDPASHTIHI+SVAYN+LFLGEFMQPD
Sbjct:   420 TDNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPD 479

Query:   481 WDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTR 540
             WDMFHSLHP AEYH AARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRA+LPGRPTR
Sbjct:   480 WDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAKLPGRPTR 539

Query:   541 DCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRV 600
             DCLFADPARDG SLLK+WN+NK +G+VGVFNCQGAGWCK TKK +IHD SPGTLT S+R 
Sbjct:   540 DCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRA 599

Query:   601 TDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLK 655
              D + ++Q+AG  W+GD+IVYA+RSGEVVRLPKGAS+P+TLKVLEYELFH  PLK
Sbjct:   600 DDADLISQVAGEDWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLK 654

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0034484 "raffinose catabolic process" evidence=IDA

GO:0047274 "galactinol-sucrose galactosyltransferase activity" evidence=IDA

GO:0052692 "raffinose alpha-galactosidase activity" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR\|locus:2020452 SIP1 "AT1G55740" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2170528 SIP1 "AT5G40390" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5VQG4 RFS "Galactinol--sucrose galactosyltransferase" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

TAIR\|locus:2141425 STS "AT4G01970" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q93XK2 STS1 "Stachyose synthase" [Pisum sativum (taxid:3888)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000010056 aglF [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|G4NBB7 MGG_11554 "Seed imbibition protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

UNIPROTKB\|Q97U94 galS "Alpha-galactosidase" [Sulfolobus solfataricus P2 (taxid:273057)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8A170 BT_3797 "Possible alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94A08	RFS2_ARATH	2, ., 4, ., 1, ., 8, 2	0.8259	0.9533	0.8460	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_XVI1715	hydrolase, hydrolyzing O-glycosyl compounds (777 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		686
PLN02219		775	PLN02219, PLN02219, probable galactinol--sucrose g	0.0
pfam05691		742	pfam05691, Raffinose_syn, Raffinose synthase or se	0.0
PLN02355		758	PLN02355, PLN02355, probable galactinol--sucrose g	0.0
PLN02684		750	PLN02684, PLN02684, Probable galactinol--sucrose g	0.0
PLN02711		777	PLN02711, PLN02711, Probable galactinol--sucrose g	0.0
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	1e-101
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	9e-60

>gnl\|CDD\|165863 PLN02219, PLN02219, probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

 Score = 1345 bits (3483), Expect = 0.0
 Identities = 577/656 (87%), Positives = 616/656 (93%), Gaps = 2/656 (0%)

Query: 1   MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPM 60
           MTV P ISI++GNLVV GKTILTGVPDNI+LTPG+G G VAGAFIGATASHSKSLHVFP+
Sbjct: 1   MTVTPKISINNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATASHSKSLHVFPV 60

Query: 61  GVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSES-DQDDGPTIYTVF 119
           GVLE LRFMCCFRFKLWWMTQRMG+CGKD+PLETQFML+ESKD  E  + DD PTIYTVF
Sbjct: 61  GVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGGNGDDAPTIYTVF 120

Query: 120 LPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVE 179
           LPLLEGQFR+ LQGN+ NEIEICLESGD AVETNQGL+LVY HAG NPFEVI QAVKAVE
Sbjct: 121 LPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLHLVYMHAGTNPFEVIRQAVKAVE 180

Query: 180 KYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG 239
           K+MQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS GGTPPKFLIIDDG
Sbjct: 181 KHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDG 240

Query: 240 WQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHN 299
           WQQIENK K+E NC+VQEGAQFA+RLTGIKEN+KFQK  Q +EQVSGLKHVVD++KQ HN
Sbjct: 241 WQQIENKEKDE-NCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHN 299

Query: 300 VKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLV 359
           VK VYVWHALAGYWGGVKPAA GMEHYD+ALAYPV SPGV+GNQPDIVMDSL+VHGLGLV
Sbjct: 300 VKQVYVWHALAGYWGGVKPAAAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLV 359

Query: 360 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 419
           +PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSY QALEASIARN
Sbjct: 360 NPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYQQALEASIARN 419

Query: 420 FPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQP 479
           F DNGCISCMCHNTDG+YS+KQTAV+RASDD+YPRDPASHTIHISSVAYNTLFLGEFMQP
Sbjct: 420 FTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQP 479

Query: 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT 539
           DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT
Sbjct: 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT 539

Query: 540 RDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVR 599
           RDCLFADPARDGTSLLK+WNVNKC+GVVGVFNCQGAGWCKI KKTRIHD SPGTLT SV 
Sbjct: 540 RDCLFADPARDGTSLLKIWNVNKCTGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVC 599

Query: 600 VTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLK 655
             DV+ +AQ+AG  W+GD++VYA++SGEVVRLPKGAS+PVTLKVLEYELFHFCPLK
Sbjct: 600 ADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPVTLKVLEYELFHFCPLK 655

Length = 775

>gnl\|CDD\|218695 pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1	Back alignment and domain information

>gnl\|CDD\|215203 PLN02355, PLN02355, probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>gnl\|CDD\|166325 PLN02684, PLN02684, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|215381 PLN02711, PLN02711, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		686
PLN02219		775	probable galactinol--sucrose galactosyltransferase	100.0
PLN02684		750	Probable galactinol--sucrose galactosyltransferase	100.0
PLN02355		758	probable galactinol--sucrose galactosyltransferase	100.0
PLN02982		865	galactinol-raffinose galactosyltransferase/ghydrol	100.0
PLN02711		777	Probable galactinol--sucrose galactosyltransferase	100.0
PF05691		747	Raffinose_syn: Raffinose synthase or seed imbibiti	100.0
PLN02229		427	alpha-galactosidase	100.0
PLN02692		412	alpha-galactosidase	100.0
PLN02808		386	alpha-galactosidase	100.0
PLN03231		357	putative alpha-galactosidase; Provisional	100.0
PLN02899		633	alpha-galactosidase	100.0
KOG2366		414	consensus Alpha-D-galactosidase (melibiase) [Carbo	99.96
PF02065		394	Melibiase: Melibiase; InterPro: IPR000111 O-Glycos	99.93
COG3345		687	GalA Alpha-galactosidase [Carbohydrate transport a	99.88
cd06592		303	GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact	99.49
cd06593		308	GH31_xylosidase_YicI YicI alpha-xylosidase is a gl	99.23
PRK10658		665	putative alpha-glucosidase; Provisional	99.0
cd06595		292	GH31_xylosidase_XylS-like This family represents a	98.87
cd06598		317	GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide	98.84
PRK10426		635	alpha-glucosidase; Provisional	98.84
cd06591		319	GH31_xylosidase_XylS XylS is a glycosyl hydrolase	98.78
cd06599		317	GH31_glycosidase_Aec37 Glycosyl hydrolase family 3	98.76
cd06594		317	GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl	98.72
cd06597		340	GH31_transferase_CtsY CtsY (cyclic tetrasaccharide	98.66
PF01055		441	Glyco_hydro_31: Glycosyl hydrolases family 31 ; In	98.64
cd06604		339	GH31_glucosidase_II_MalA Alpha-glucosidase II (alp	98.54
cd06589		265	GH31 The enzymes of glycosyl hydrolase family 31 (	98.52
cd06602		339	GH31_MGAM_SI_GAA This family includes the followin	98.51
cd06600		317	GH31_MGAM-like This family includes the following	98.44
cd06601		332	GH31_lyase_GLase GLases (alpha-1,4-glucan lyases)	98.28
COG1501		772	Alpha-glucosidases, family 31 of glycosyl hydrolas	98.27
cd06603		339	GH31_GANC_GANAB_alpha This family includes the clo	98.14
PLN02763		978	hydrolase, hydrolyzing O-glycosyl compounds	98.08
PF10566		273	Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro:	98.06
KOG1065		805	consensus Maltase glucoamylase and related hydrola	96.93
TIGR01515		613	branching_enzym alpha-1,4-glucan:alpha-1,4-glucan	92.92
PF13200		316	DUF4015: Putative glycosyl hydrolase domain	90.3
PF02638		311	DUF187: Glycosyl hydrolase like GH101; InterPro: I	84.94

>PLN02219 probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

Probab=100.00  E-value=2.8e-192  Score=1603.17  Aligned_cols=657  Identities=88%  Similarity=1.429  Sum_probs=633.9

Q ss_pred             CcccceeEeeCCeEEEcCeeeccCCCCCeEEeccCCcccccceeeecccCCCCcceeeeCCcccCceeEEEeeecccccc
Q 005650            1 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMT   80 (686)
Q Consensus         1 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~lg~~~~~r~~~~~r~k~~W~~   80 (686)
                      ||||+.|+|+||+|+|+|+++|++||+||++||++....+.|+|+||++++++|||+++||+++++|||||||||+|||+
T Consensus         1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~F~G~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WWmt   80 (775)
T PLN02219          1 MTVTPKISINNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATASHSKSLHVFPVGVLEGLRFMCCFRFKLWWMT   80 (775)
T ss_pred             CcccceeEEcCCeEEECCEEeeccCCCceEecCCCCCCCCcceEEeeecCCcccceeeecccccCcEEeeeeehhhhccc
Confidence            99999999999999999999999999999999998887889999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCccceEEEEecCCCCCCC-CCCCCcEEEEEEEeecCceEEEeecCCCCeEEEEEecCCccccccccceEE
Q 005650           81 QRMGTCGKDVPLETQFMLVESKDNSESD-QDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLV  159 (686)
Q Consensus        81 p~~g~~~~~ip~etq~ll~e~~~~~~~~-~~~~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~esg~~~~~~~~~~~~l  159 (686)
                      ||+|++++|||.||||+|+|.++.+..+ .+++++.|+|||||++|.|||+||++++++|+||+|||++.++++++...|
T Consensus        81 ~~~G~~g~dip~eTQ~~l~e~~~~~~~~~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~~~~v  160 (775)
T PLN02219         81 QRMGSCGKDIPLETQFMLLESKDEVEGGNGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLHLV  160 (775)
T ss_pred             hhhccCCCcCCcceEEEEEEcCCCccccccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCccccccccceEE
Confidence            9999999999999999999998632211 123455799999999999999999999999999999999999999999999


Q ss_pred             EEEeCCChHHHHHHHHHHHHHHhhhccccccccCcCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecc
Q 005650          160 YTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG  239 (686)
Q Consensus       160 ~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWcTWdaf~~~Vte~~Il~~l~~L~~~Gi~~~~vIIDDG  239 (686)
                      ||++|+|||++|++|++++++|+++|++|++|++|+++|+|||||||+||++|||++|+++++.|+++|+|++|||||||
T Consensus       161 ~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDDG  240 (775)
T PLN02219        161 YMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDG  240 (775)
T ss_pred             EEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCccchhhhhccccccccccCCccCCcccccccCCccCCChHHHHHHHHhcCCCcEEEEeeecccccCccCCC
Q 005650          240 WQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPA  319 (686)
Q Consensus       240 WQ~~~~~~~~~~~~~~~~~~~~~~rl~~~~~n~KFp~~~~~~~~~~GLk~lv~~Ik~~~Glk~VgvWhal~GyWgGI~P~  319 (686)
                      ||++.++.+ +.++.+.+|.||.+||++|++|.||++....+.||.|||++|++||+++|||||||||||+||||||+|+
T Consensus       241 wQsi~~~~~-~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~  319 (775)
T PLN02219        241 WQQIENKEK-DENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPA  319 (775)
T ss_pred             ccccccccc-cccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCC
Confidence            999998754 4577888999999999999999999964334578999999999999999999999999999999999999


Q ss_pred             CcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCC
Q 005650          320 ADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHG  399 (686)
Q Consensus       320 s~~~~~y~~~~~~~~~spG~~~~~pd~a~d~~~~~G~glv~p~~a~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~  399 (686)
                      ++++++|+++++||+.+||+.+++||+++|++..+|+++++|+++++||++||+||+++||||||||+|++|++++.+++
T Consensus       320 ~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~g  399 (775)
T PLN02219        320 AAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHG  399 (775)
T ss_pred             CcccccccccccccccCCCccccCcchhhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhHHHHHHHHHHHHHHhhCCCCcEEecccCCCCCcccccccCeEEccCCcCCCCccchhHHHHHHHhhhhhcCCCCCC
Q 005650          400 GRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQP  479 (686)
Q Consensus       400 g~v~l~~ay~~Al~~s~~~~F~~~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~P  479 (686)
                      +|++++++||+||++|++|||+++++|+||||+++++|+.++++++|+||||||++|++|++||++|||||||||+++||
T Consensus       400 grv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v~P  479 (775)
T PLN02219        400 GRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQP  479 (775)
T ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCCCceecccCCCCCCccccccCCCCCCcceEEEEe
Q 005650          480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWN  559 (686)
Q Consensus       480 DwDMf~s~h~~a~~HaaaraisGgPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~pg~pt~d~lf~dp~~d~~~lLki~~  559 (686)
                      |||||||.||+|+|||++||||||||||||+||+||++|||+||+|||+||||++||+|||||||.||++|+++||||||
T Consensus       480 DWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLKIwn  559 (775)
T PLN02219        480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKIWN  559 (775)
T ss_pred             CchhceecCccHHHHHHHHhhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCcceeEEEEecCCccccccccccccCCCCCceEEEEecccchhhhhhhCCCCCCcEEEEEecCCeEEeCCCCCcEEE
Q 005650          560 VNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPV  639 (686)
Q Consensus       560 ~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~~~~~~~vy~~~~g~~~~l~~~~~~~v  639 (686)
                      +|+++||||+|||||++||++++++.+|+++|.++|+.|+++||+++.++++++|+++|+||+|++|+++++++++.++|
T Consensus       560 ~n~~~gviG~FNcqGagW~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~~~~v  639 (775)
T PLN02219        560 VNKCTGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPV  639 (775)
T ss_pred             cccccceEEEEeccCCCCCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCCceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCcEEEEEEeecccch
Q 005650          640 TLKVLEYELFHFCPLKVNL  658 (686)
Q Consensus       640 ~L~~~~~ei~t~~Pv~~~~  658 (686)
                      +|++++|||||++||+...
T Consensus       640 tL~~~~~Ei~tv~Pv~~~~  658 (775)
T PLN02219        640 TLKVLEYELFHFCPLKEIA  658 (775)
T ss_pred             EecCCcEEEEEEeeEEEec
Confidence            9999999999999999764

>PLN02684 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PLN02355 probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>PLN02711 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins	Back alignment and domain information

>PLN02229 alpha-galactosidase	Back alignment and domain information

>PLN02692 alpha-galactosidase	Back alignment and domain information

>PLN02808 alpha-galactosidase	Back alignment and domain information

>PLN03231 putative alpha-galactosidase; Provisional	Back alignment and domain information

>PLN02899 alpha-galactosidase	Back alignment and domain information

>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase	Back alignment and domain information

>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose	Back alignment and domain information

>PRK10658 putative alpha-glucosidase; Provisional	Back alignment and domain information

>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus	Back alignment and domain information

>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY	Back alignment and domain information

>PRK10426 alpha-glucosidase; Provisional	Back alignment and domain information

>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate	Back alignment and domain information

>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37	Back alignment and domain information

>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride	Back alignment and domain information

>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ	Back alignment and domain information

>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities	Back alignment and domain information

>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase	Back alignment and domain information

>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase	Back alignment and domain information

>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II	Back alignment and domain information

>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end	Back alignment and domain information

>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB)	Back alignment and domain information

>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase	Back alignment and domain information

>PF13200 DUF4015: Putative glycosyl hydrolase domain	Back alignment and domain information

>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		686
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	3e-08
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	4e-07
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	1e-06
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	1e-04
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 67.2 bits (163), Expect = 1e-11
 Identities = 48/362 (13%), Positives = 99/362 (27%), Gaps = 114/362 (31%)

Query: 31  LTPGNGVGL--VAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGK 88
           L P   V +  V G+  G      K+     + V    +  C   FK++W+   +  C  
Sbjct: 147 LRPAKNVLIDGVLGS--G------KT--WVALDVCLSYKVQCKMDFKIFWLN--LKNCNS 194

Query: 89  DV----PLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLE 144
                  L+     ++    S SD      +       ++ + R  L+         CL 
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS---IQAELRRLLKSKPYEN---CLL 248

Query: 145 SGDNAVETNQGL--------YLVYTHAGPNPFEVISQAVK--AVEKYMQTFTHREKKKLP 194
              N V+  +           L+ T        + +      +++ +  T T  E K L 
Sbjct: 249 VLLN-VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL- 306

Query: 195 SFLDWFG----------------------------WCTWDAFYTDVTAEGVDEGLKSLSA 226
             L +                                TWD  +  V  + +   ++S   
Sbjct: 307 -LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD-NWKHVNCDKLTTIIESSLN 364

Query: 227 GGTPP-------KFLIIDDG-----------WQQIENKPKEESNCIVQEGAQFASRLTGI 268
              P        +  +               W    +  K +   +V +          +
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW---FDVIKSDVMVVVNK---LHKYSL-V 417

Query: 269 KENSK----------FQKKCQNSEQVSGLKH--VVDESKQNHNVKYVYVWHALA-----G 311
           ++  K           + K +   + +   H  +VD    ++N+   +    L       
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYA--LHRSIVD----HYNIPKTFDSDDLIPPYLDQ 471

Query: 312 YW 313
           Y+
Sbjct: 472 YF 473

PyMOL of 1vt4

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745	Back alignment and structure

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		686
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	100.0
3hg3_A		404	Alpha-galactosidase A; glycoprotein, carbohydrate-	100.0
1uas_A		362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	100.0
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	100.0
3lrk_A		479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	100.0
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	100.0
4do4_A		400	Alpha-N-acetylgalactosaminidase; pharmacological c	100.0
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	100.0
3a21_A		614	Putative secreted alpha-galactosidase; beta-alpha-	100.0
4fnq_A		729	Alpha-galactosidase AGAB; glycoside hydrolase, hyd	99.97
2xn2_A		732	Alpha-galactosidase; hydrolase, glycosidase; HET:	99.94
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	99.92
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	99.91
2f2h_A		773	Putative family 31 glucosidase YICI; BETA8alpha8 b	99.4
4ba0_A		817	Alpha-glucosidase, putative, ADG31B; hydrolase; HE	99.13
2g3m_A		693	Maltase, alpha-glucosidase; hydrolase, glycoside h	99.12
2xvl_A		1020	Alpha-xylosidase, putative, XYL31A; hydrolase, gly	98.94
3lpp_A		898	Sucrase-isomaltase; glycoside hydrolase family 31,	98.93
3nsx_A		666	Alpha-glucosidase; structural genomics, PSI-2, pro	98.89
3l4y_A		875	Maltase-glucoamylase, intestinal; glycoside hydrol	98.87
3a24_A		641	Alpha-galactosidase; glycoside hydrolase family 97	98.67
3top_A		908	Maltase-glucoamylase, intestinal; membrane, hydrol	98.05
2d73_A		738	Alpha-glucosidase SUSB; glycoside hydrolase family	97.99
2x2h_A		1027	Alpha-1,4-glucan lyase isozyme 1; anhydrofructose	97.19
3k1d_A		722	1,4-alpha-glucan-branching enzyme; mycobacterium t	91.03
1m7x_A		617	1,4-alpha-glucan branching enzyme; alpha/beta barr	87.97
3zss_A		695	Putative glucanohydrolase PEP1A; alpha-glucan bios	84.71
1j0h_A		588	Neopullulanase; beta-alpha-barrels, hydrolase; 1.9	82.24
1ea9_C		583	Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A	82.15
1gcy_A		527	Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b	81.81
3m07_A		618	Putative alpha amylase; IDP00968, csgid, structura	80.07

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}	Back alignment and structure

Probab=100.00  E-value=1.1e-46  Score=417.11  Aligned_cols=387  Identities=15%  Similarity=0.161  Sum_probs=264.5

Q ss_pred             cccccccccccccccCHHHHHHHHHHH----HhCCCCCcEEEEecccccccCCCCccchhhhhccccccccccCCccC-C
Q 005650          198 DWFGWCTWDAFYTDVTAEGVDEGLKSL----SAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-S  272 (686)
Q Consensus       198 d~~GWcTWdaf~~~Vte~~Il~~l~~L----~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~rl~~~~~n-~  272 (686)
                      .+||||||++||++|||++|++.++.|    ++.|+.  ||+||||||..+++..++....    ..-...+++|.++ +
T Consensus        12 pp~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~~--~~~iDDgW~~~~~~~~~y~~~~----~~~~d~~G~~~~~~~   85 (433)
T 3cc1_A           12 PPMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWE--YIVVDIQWYEPTANSSAYNPFA----PLCMDEYGRLLPATN   85 (433)
T ss_dssp             CCEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTCC--EEEECSCTTCCCTTSTTCCTTS----CSCBCTTSCBCCCTT
T ss_pred             CCEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCCe--EEEECCCcCCCCCccccccccc----ccccCCCCCEeECCc
Confidence            469999999999999999999999999    555544  9999999998754421000000    0001235677755 7


Q ss_pred             cccccccCCccCCChHHHHHHHHhcCCCcEEEEeeecccccCccCCCCccccc-cccc-ccccCCCCCCCCCCCcceecc
Q 005650          273 KFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEH-YDTA-LAYPVTSPGVMGNQPDIVMDS  350 (686)
Q Consensus       273 KFp~~~~~~~~~~GLk~lv~~Ik~~~Glk~VgvWhal~GyWgGI~P~s~~~~~-y~~~-~~~~~~spG~~~~~pd~a~d~  350 (686)
                      |||+.    ..+.||++++++||+ +||| +|||+.+.-.+..+.|+++.... |..+ +..+...        + .+..
T Consensus        86 kFP~~----~~~~Gl~~l~~~ih~-~Glk-~Giw~~p~i~~~~v~~~s~~~~~~~~~~di~~~~~~--------~-~~~~  150 (433)
T 3cc1_A           86 RFPSA----KNGAGFKPLSDAIHD-LGLK-FGIHIMRGIPRQAVYENSPVLGSTKTAREIAHTNSI--------C-PWNT  150 (433)
T ss_dssp             TCGGG----TTTTTTHHHHHHHHH-TTCE-EEEEEESSEEHHHHHHTCBCTTSSCBHHHHEETTCC--------B-TTBT
T ss_pred             cCCCc----ccCCCHHHHHHHHHH-cCCe-eEEEeCCCCchhccCCCCccccccceecccccCCcc--------c-CCCC
Confidence            89842    123499999999999 6999 89999873212234555543110 1000 0000000        0 0000


Q ss_pred             ccccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhhCCCCcEEeccc
Q 005650          351 LAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMC  430 (686)
Q Consensus       351 ~~~~G~glv~p~~a~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~v~l~~ay~~Al~~s~~~~F~~~~iI~cMs  430 (686)
                       ...++++.+| +++.||+.++++|++|||||||+|+|... .+. +  ...+..++|++||+++      +++|+.|+|
T Consensus       151 -~~~~lD~~~p-~~~~~~~~~~~~l~~~GvDyvK~D~~~~~-~~~-~--~~~~~~~~~~~aL~~~------gr~i~~slc  218 (433)
T 3cc1_A          151 -DMYGVDPTKE-GAQSYYNSLFELYAQWGVDFVKVDDIAAS-RLY-D--THLEEIKMIQRAIQAC------GRPMVLSLS  218 (433)
T ss_dssp             -TEEEECTTST-THHHHHHHHHHHHHHTTCCEEEEESCSCT-TSS-C--CCHHHHHHHHHHHHHS------SSCCEEECC
T ss_pred             -CceeecCCCH-HHHHHHHHHHHHHHHcCCCEEEeCCcccc-cCC-c--ccHHHHHHHHHHHHhc------CCCEEEEec
Confidence             0122444555 59999999999999999999999999852 221 1  1356677888888753      789999999


Q ss_pred             CCCCC----cccccccCeEEccCCcCCCCccchhHHHHH-HHhhhhhcCCCCCCCCcccccCC-----------------
Q 005650          431 HNTDG----IYSSKQTAVIRASDDYYPRDPASHTIHISS-VAYNTLFLGEFMQPDWDMFHSLH-----------------  488 (686)
Q Consensus       431 ~~~~~----l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~-na~nsl~~g~~~~PDwDMf~s~h-----------------  488 (686)
                      +++..    .+..+++++||+|+|++|.|+...  |++. +++++.++++++|||+|||+++|                 
T Consensus       219 ~g~~~~~~~~~~~~~~n~wR~s~D~~~~w~~~~--~~~~~~~~~~~~~~~g~~nD~Dml~vg~~g~~~~~~~~~~~~~~l  296 (433)
T 3cc1_A          219 PGPAPIKYAHHFKTNANMWRITDDFWDDWSLLY--QMFERCEVWEKHIGTGHWPDCGMLPLGHIGIRSVDGPGGDRWTRF  296 (433)
T ss_dssp             CSBSSEESCSSSCCTTGGGCCEECCCSCHHHHH--HHHHHHHHHHHSCCCSCCCBCCCBCCSEECTTCSSSSSSSEECSS
T ss_pred             CCCCChhhhhhhhhhCcEEEeccCccccHHHHH--HHHHHHHHHHhhcCCCccCChHHhcccCccccccccccccccCCC
Confidence            86322    245678999999999999998754  3343 55677788999999999999985                 


Q ss_pred             --hhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCCCceecccCCCCCCccccccCCCCCCcceEEEEeec--cCc
Q 005650          489 --PAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVN--KCS  564 (686)
Q Consensus       489 --~~a~~HaaaraisGgPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~pg~pt~d~lf~dp~~d~~~lLki~~~~--~~~  564 (686)
                        .+.++|+++|||+++||++||.+.+.+-+.|+-|+.  .+|+..++-|++.+- ++.+    +  -+.||...  .++
T Consensus       297 t~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL~N--~eviavnqdg~~~~~-v~~~----~--~~~vw~~~l~~g~  367 (433)
T 3cc1_A          297 TKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTN--EGILSINQKSVLNRF-VYRE----E--DKVAWAANGRNGE  367 (433)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHCC--HHHHHHHHHCEEEEE-EEEE----T--TEEEEEEECSSSC
T ss_pred             CHHHHHHHHHHHHHhcCceEecCccccCCHHHHHHhcC--hhheeecCCCcCcee-eEec----C--CcEEEEEECCCCC
Confidence              457889999999999999999999888777776664  346666554444321 1111    1  26788763  456


Q ss_pred             ceeEEEEecCCccccccccccccCCCCCceEEEEecccchhhhhhhCCCCCCcEEEEEecCCe-EEeCCCCCcEEEEecC
Q 005650          565 GVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGE-VVRLPKGASVPVTLKV  643 (686)
Q Consensus       565 gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~~~~~~~vy~~~~g~-~~~l~~~~~~~v~L~~  643 (686)
                      -+|++||.....                 .+-++++++++         ..+.|.|++.-+++ +.....+..++++|++
T Consensus       368 ~~val~N~~~~~-----------------~~~~~~~~~lg---------l~~~~~v~Dlw~~~~~g~~~~~~~~~~~v~~  421 (433)
T 3cc1_A          368 AYVALFNLHDQQ-----------------KTLQFRLDMVG---------IMETVQLFNVWDRSFLQSLAPSESFQIELKP  421 (433)
T ss_dssp             EEEEEEECSSSC-----------------EEEEECGGGTT---------CCSCEEEEETTTTEEEEEECTTCCEEEEECT
T ss_pred             EEEEEEeCCCCC-----------------EEEEEEHHHcC---------CCCceEEEECCCCCccccccCCceEEEEECC
Confidence            789999965421                 33345666664         23478999997776 5555333489999999


Q ss_pred             CcEEEEEEeec
Q 005650          644 LEYELFHFCPL  654 (686)
Q Consensus       644 ~~~ei~t~~Pv  654 (686)
                      +++.+|.+.|.
T Consensus       422 hg~~l~~l~~~  432 (433)
T 3cc1_A          422 HQSMMLKLSPD  432 (433)
T ss_dssp             TCEEEEEEEEC
T ss_pred             CcEEEEEEEeC
Confidence            99999999985

PyMOL of 3cc1

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*	Back alignment and structure

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}	Back alignment and structure

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*	Back alignment and structure

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*	Back alignment and structure

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13	Back alignment and structure

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*	Back alignment and structure

>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*	Back alignment and structure

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}	Back alignment and structure

>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*	Back alignment and structure

>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*	Back alignment and structure

>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*	Back alignment and structure

>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*	Back alignment and structure

>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*	Back alignment and structure

>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*	Back alignment and structure

>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*	Back alignment and structure

>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}	Back alignment and structure

>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*	Back alignment and structure

>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*	Back alignment and structure

>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*	Back alignment and structure

>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}	Back alignment and structure

>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*	Back alignment and structure

>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*	Back alignment and structure

>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*	Back alignment and structure

>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1	Back alignment and structure

>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*	Back alignment and structure

>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		686
d1szna2		314	c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T	4e-15
d1zy9a2		348	c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata	4e-12
d1uasa2		273	c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [	1e-05
d1r46a2		292	c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens)	2e-04
d1ktba2		293	c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu	0.002

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

 Score = 74.5 bits (182), Expect = 4e-15
 Identities = 47/329 (14%), Positives = 93/329 (28%), Gaps = 64/329 (19%)

Query: 200 FGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPP---KFLIIDDGWQQIENKPKEESNCIVQ 256
            GW +W+A++ D+         + + + G       ++ IDD W   + +          
Sbjct: 14  LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGR---------V 64

Query: 257 EGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGV 316
           +G    +        ++F           G+  +  +         + ++          
Sbjct: 65  DGHIAPNA-------TRFP---------DGIDGLAKKVHALG--LKLGIYSTAGTATCAG 106

Query: 317 KPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLA 376
            PA+ G E  D                        A  G+  +      N  ++      
Sbjct: 107 YPASLGYEDVDA--------------------ADFADWGVDYLKYD-NCNVPSDWQDEYV 145

Query: 377 SCGVDGVKVDVQNIIETLG------AGHGGRVSLTRSYHQALEASIARNFPDNGCISCMC 430
           +C  D VK        T         G+    S +     A+  ++A+   +     C+ 
Sbjct: 146 ACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVLSMCIW 205

Query: 431 HNTDGIYSSKQTA-VIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFH---- 485
              D       T    R SDD  P   +   I ++  ++    +  +   D DM      
Sbjct: 206 GQADVFSWGNSTGISWRMSDDISPNWGSVTRI-LNLNSFKLNSVDFWGHNDADMLEVGNG 264

Query: 486 SLHPAAEY-HGAARAVGGCAIYVSDKPGN 513
           +L  A    H A  A     + +      
Sbjct: 265 NLTAAETRTHFALWAAMKSPLLIGTDLAQ 293

PyMOL of d1szna2

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348	Back information, alignment and structure

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		686
d1szna2		314	Melibiase {Trichoderma reesei [TaxId: 51453]}	100.0
d1uasa2		273	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	100.0
d1r46a2		292	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ktba2		293	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	100.0
d1zy9a2		348	Alpha-galactosidase GalA catalytic domain {Thermot	100.0
d2f2ha4		338	Putative glucosidase YicI, domain 2 {Escherichia c	99.26
d1uasa1		89	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	94.76
d1ktba1		95	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	94.38
d1gcya2		357	G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase	91.34
d1g5aa2		554	Amylosucrase {Neisseria polysaccharea [TaxId: 489]	89.15
d1r46a1		98	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	88.69
d1szna1		103	Melibiase {Trichoderma reesei [TaxId: 51453]}	88.55
d1ht6a2		347	Plant alpha-amylase {Barley (Hordeum vulgare), AMY	84.62
d2bhua3		420	Glycosyltrehalose trehalohydrolase, central domain	82.86
d2guya2		381	Fungal alpha-amylases {Aspergillus oryzae, Taka-am	80.96

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=1.1e-39  Score=340.41  Aligned_cols=275  Identities=17%  Similarity=0.211  Sum_probs=204.3

Q ss_pred             ccccccccccccccCHHHHHHHHHHHHhCCC---CCcEEEEecccccccCCCCccchhhhhccccccccccCCccC-Ccc
Q 005650          199 WFGWCTWDAFYTDVTAEGVDEGLKSLSAGGT---PPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKF  274 (686)
Q Consensus       199 ~~GWcTWdaf~~~Vte~~Il~~l~~L~~~Gi---~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~rl~~~~~n-~KF  274 (686)
                      +||||||++|+++|||++|++.++.|++.|+   ++++|+||||||..+++.                 +++|.++ +||
T Consensus        13 p~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~-----------------~G~~~~d~~kF   75 (314)
T d1szna2          13 SLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV-----------------DGHIAPNATRF   75 (314)
T ss_dssp             CEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB-----------------TTBCCBCTTTC
T ss_pred             CCcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCC-----------------CCCeeeCHhhc
Confidence            5899999999999999999999999999876   357999999999876542                 2456654 788


Q ss_pred             cccccCCccCCChHHHHHHHHhcCCCcEEEEeeecccccCccCCCCcccccccccccccCCCCCCCCCCCcceecccccc
Q 005650          275 QKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVH  354 (686)
Q Consensus       275 p~~~~~~~~~~GLk~lv~~Ik~~~Glk~VgvWhal~GyWgGI~P~s~~~~~y~~~~~~~~~spG~~~~~pd~a~d~~~~~  354 (686)
                      |         +||++++++||+ +|+| +|+|+++.++|...+|++...+......                    ....
T Consensus        76 P---------~Gl~~~~~~i~~-~G~k-~Giw~~p~~~~~~~~p~~~~~~~~~~~~--------------------~~~~  124 (314)
T d1szna2          76 P---------DGIDGLAKKVHA-LGLK-LGIYSTAGTATCAGYPASLGYEDVDAAD--------------------FADW  124 (314)
T ss_dssp             T---------THHHHHHHHHHH-TTCE-EEEEEESSSBCTTSCBCCTTCHHHHHHH--------------------HHHT
T ss_pred             C---------CchHHHHHHHHh-cCCe-EEEeecccccccCCCcccccccccchhh--------------------hhhc
Confidence            8         899999999999 7999 8999999888877777653211111000                    0011


Q ss_pred             ccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccC------CCCCchhHHHHHHHHHHHHHHhhCCCCcEEec
Q 005650          355 GLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGA------GHGGRVSLTRSYHQALEASIARNFPDNGCISC  428 (686)
Q Consensus       355 G~glv~p~~a~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~------~~~g~v~l~~ay~~Al~~s~~~~F~~~~iI~c  428 (686)
                      |+++..| +++.+++.+.+.++++||||+|+|.+........      .+..........+.++.+++++.+++..+..|
T Consensus       125 ~~d~~~~-d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~c  203 (314)
T d1szna2         125 GVDYLKY-DNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVLSMC  203 (314)
T ss_dssp             TCCEEEE-ECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSCCEEEEC
T ss_pred             CCccccc-hHHHHHHHHHHHHHHhCCceEEecccccchhccCcccCccccCcchhhHHHHHHHHHHHHHHhCCCeEEEec
Confidence            2333332 4556677777788999999999999875433211      11112223344455666778888877777888


Q ss_pred             ccCCCCCc-ccccccCeEEccCCcCCCCccchhHHHHHHHhhhhhcCCCCCCCCcccccCC-----hhHHHHHHHHHhcC
Q 005650          429 MCHNTDGI-YSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH-----PAAEYHGAARAVGG  502 (686)
Q Consensus       429 Ms~~~~~l-~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~PDwDMf~s~h-----~~a~~HaaaraisG  502 (686)
                      +++..... +....++++|+|+|++|.|...+. ++..++++..+.+...|||+||+..++     .+.++|+++||++|
T Consensus       204 ~~~~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~-~~~~~~~~~~~~~~~~~~DpDml~~g~~~lt~~e~r~~~sl~a~~~  282 (314)
T d1szna2         204 IWGQADVFSWGNSTGISWRMSDDISPNWGSVTR-ILNLNSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMK  282 (314)
T ss_dssp             CTTGGGHHHHGGGTCSEEECSSCCCSSHHHHHH-HHHHHHTCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCchhhhhhcccceeecCCcccccchHHH-HHHHHHHHHHHhcCCccCCchhcccCCCCCCHHHHHHHHHHHHHHh
Confidence            88765432 455788999999999999987654 567789999888999999999999875     36789999999999


Q ss_pred             CcEEeecCCCCCcHHHHhhhc
Q 005650          503 CAIYVSDKPGNHNFDLLRKLV  523 (686)
Q Consensus       503 gPvyisD~pg~hd~~lL~~lv  523 (686)
                      +|++|||.+.+.+-+.|.-|+
T Consensus       283 ~pl~~g~dl~~~~~~~~~ll~  303 (314)
T d1szna2         283 SPLLIGTDLAQLSQNNINLLK  303 (314)
T ss_dssp             CCEEECSCGGGCCHHHHHHHT
T ss_pred             CchhccCCcccCCHHHHHHhc
Confidence            999999988777766555443

PyMOL of d1szna2

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}	Back information, alignment and structure

>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]}	Back information, alignment and structure

>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}	Back information, alignment and structure

>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]}	Back information, alignment and structure

>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]}	Back information, alignment and structure