Your job contains 1 sequence.
>005651
MTDYRLPSTMNLWTDDNGSVMEAFMSSDLTGIWPPSQSSASTADPMKTHISSSSQQQQQQ
QQFFNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSSMLGWGDGYYKGEGEKGKSSK
IKTSSAAEQEHRKKVLRELNSLISGSTSSPTDDAVDEEVTDTEWFFLISMTQSFYVTGGG
GGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEV
IIQNSDLMNKVRFLFNFNGSMEIGTWPSAMQNPDQGENDPSSWINDPSPTPAPTAGFIEI
KDSTAAATTTTTTTTTTTTPAIGSGSASNLSKGIHFELPSSVSLTESVDLQHQQIPQTQS
FFTRELNFSEYAYDHNSVKNGSSRLFKPESGEILNFAESKRSSCTGNGNNSLLSNHSQFV
AEDSNKKKRSPTSRGSTEEGMLSFTSGVILPSSGVVKSSGGAGDSDHSDLEASVVKDPDS
SRVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLL
GDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHAS
KLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQAT
VKMGSRFYTQEQLKNVLAAKVGDTQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005651
(685 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 750 1.2e-138 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 664 5.7e-131 3
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 656 9.4e-122 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 670 5.1e-121 2
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 482 4.2e-89 3
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 352 1.5e-52 3
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 279 1.2e-38 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 275 1.4e-38 2
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 262 3.9e-36 3
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 182 5.3e-25 2
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 185 1.0e-22 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 198 1.1e-22 2
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 268 1.9e-22 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 172 1.3e-19 2
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 162 2.7e-19 2
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 228 4.1e-18 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 228 4.1e-18 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 163 3.9e-14 4
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 205 5.3e-14 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 174 5.5e-14 3
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 201 1.9e-13 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 201 2.2e-13 1
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 139 3.4e-13 2
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 197 7.8e-13 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 202 1.1e-12 2
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 187 7.1e-12 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 189 7.6e-12 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 188 8.3e-12 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 165 2.6e-11 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 183 3.6e-11 3
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 189 6.8e-11 2
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 174 7.5e-11 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 178 1.2e-10 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 127 1.5e-10 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 178 1.9e-10 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 173 2.3e-10 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 131 2.8e-10 2
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 169 7.1e-10 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 173 1.0e-09 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 121 3.1e-09 2
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 166 5.4e-09 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 160 8.7e-09 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 159 9.0e-09 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 163 9.7e-09 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 113 1.4e-08 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 157 1.8e-08 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 159 2.2e-08 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 117 2.5e-08 2
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 153 5.6e-08 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 125 5.7e-08 2
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 154 6.4e-08 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 152 1.1e-07 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 151 1.3e-07 1
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 148 4.1e-07 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 139 4.2e-07 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 143 7.3e-07 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 136 1.3e-06 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 144 1.5e-06 2
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 131 2.8e-06 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 136 3.7e-06 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 133 3.8e-06 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 134 7.1e-06 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 134 1.0e-05 1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 131 1.0e-05 1
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 113 1.2e-05 2
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 112 2.4e-05 2
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 129 2.9e-05 1
TAIR|locus:2157538 - symbol:ILR3 "AT5G54680" species:3702... 125 3.3e-05 1
UNIPROTKB|Q5JNS0 - symbol:P0706B05.43 "Os01g0293100 prote... 114 3.8e-05 2
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 126 5.0e-05 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 126 5.1e-05 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 127 5.4e-05 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 128 5.5e-05 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 118 6.1e-05 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 121 6.2e-05 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 126 7.0e-05 1
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 127 7.6e-05 1
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 127 7.7e-05 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 122 0.00011 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 103 0.00012 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 125 0.00013 1
UNIPROTKB|G3V2R5 - symbol:MAX "Protein max" species:9606 ... 102 0.00015 1
UNIPROTKB|G3V563 - symbol:MAX "Protein max" species:9606 ... 102 0.00015 1
UNIPROTKB|Q6V3B1 - symbol:MAX "MAX protein" species:9606 ... 102 0.00015 1
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species... 120 0.00016 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 122 0.00016 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 120 0.00016 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 123 0.00017 1
UNIPROTKB|Q6YTU1 - symbol:P0419H09.4 "cDNA clone:002-131-... 115 0.00017 2
UNIPROTKB|Q6YW41 - symbol:B1131G07.17 "Basic helix-loop-h... 127 0.00018 1
TAIR|locus:2129710 - symbol:bHLH104 "AT4G14410" species:3... 120 0.00021 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 122 0.00022 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 123 0.00022 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 108 0.00022 2
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 124 0.00026 3
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 116 0.00029 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 122 0.00030 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 116 0.00042 1
TAIR|locus:2146663 - symbol:BHLH101 "AT5G04150" species:3... 115 0.00051 1
TAIR|locus:2040287 - symbol:BHLH100 "basic helix-loop-hel... 115 0.00053 1
WARNING: Descriptions of 5 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 750 (269.1 bits), Expect = 1.2e-138, Sum P(2) = 1.2e-138
Identities = 175/376 (46%), Positives = 222/376 (59%)
Query: 1 MTDYRLPSTMNLWT-DDNGSVMEAFMSS-DLTGIWPPSQSSASTADPMKTHIXXXXXXXX 58
MTDYRL TMNLWT DDN S+MEAFMSS D++ +WPP+ ++ +TA T
Sbjct: 1 MTDYRLQPTMNLWTTDDNASMMEAFMSSSDISTLWPPASTTTTTAT---TETTPTPAMEI 57
Query: 59 XXXXFFNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXX 118
FNQETLQQRLQ LIEG+ EGWTYAIFWQ S D+SG+S+LGWGD
Sbjct: 58 PAQAGFNQETLQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANP 117
Query: 119 XXIKTS----SAAEQEHRKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSF 174
+S + A+QE+RKKVLRELNSLISG + P WFFL+SMTQSF
Sbjct: 118 RRRSSSPPFSTPADQEYRKKVLRELNSLISGGVA-PSDDAVDEEVTDTEWFFLVSMTQSF 176
Query: 175 YVTXXXXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVE 234
L G+A+ + VWVSG+++L+ SGC+RA+QG VFG+ T+ CIPSANGVVE
Sbjct: 177 -----ACGAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVE 231
Query: 235 LGSTEVIIQNSDLMNKVRFLFNFNGSMEIGTWPSAMQNPDQGENDPSSWINDPSPTPAPT 294
+GSTE I Q+SDL+NKVR LFNF+G + + +PDQGENDPS WINDP TP
Sbjct: 232 VGSTEPIRQSSDLINKVRILFNFDGGAGDLSGLNWNLDPDQGENDPSMWINDPIGTP--- 288
Query: 295 AGFIEIKDSXXXXXXXXXXXXXXXXPAIGSGSASNLSKGIHFE-LPSSVSLTESVDLQHQ 353
G E + +GS+S +++ + + PS V
Sbjct: 289 -GSNEPGNGAPSSSSQLFSKSIQFE----NGSSSTITENPNLDPTPSPVH-------SQT 336
Query: 354 QIPQTQSFFTRELNFS 369
Q P+ + F+RELNFS
Sbjct: 337 QNPKFNNTFSRELNFS 352
Score = 628 (226.1 bits), Expect = 1.2e-138, Sum P(2) = 1.2e-138
Identities = 131/186 (70%), Positives = 153/186 (82%)
Query: 497 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS 556
ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI+YINEL++K+
Sbjct: 444 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVK 503
Query: 557 AESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDA 616
ES+K ++ +L VK ELAG K S SG D+ S + K + ++IEVKIIGWDA
Sbjct: 504 TESEKLQIKNQLEEVKLELAGR-KASASGG-----DMSSSCSSIKPVGMEIEVKIIGWDA 557
Query: 617 MIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKNV 676
MIR++SSK+NHPAA+LM AL +L+LEVNHASMSVVNDLMIQQATVKMG R YTQEQL+
Sbjct: 558 MIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQEQLRAS 617
Query: 677 LAAKVG 682
L +K+G
Sbjct: 618 LISKIG 623
Score = 125 (49.1 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 52/136 (38%), Positives = 66/136 (48%)
Query: 320 PAIGSGSASN--LSKGIHFELPSSVSLTESVDLQ------HQQI--PQTQSFFTRELNFS 369
P G+ S+S+ SK I FE SS ++TE+ +L H Q P+ + F+RELNFS
Sbjct: 293 PGNGAPSSSSQLFSKSIQFENGSSSTITENPNLDPTPSPVHSQTQNPKFNNTFSRELNFS 352
Query: 370 EYAYDHNSVKNGSSRLFKPESGEILNFA-ESKRSSCTXXXXXXXXXXHSQFVAEDSNKKK 428
SS L KP SGEILNF E KRSS +QF NK+K
Sbjct: 353 ----------TSSSTLVKPRSGEILNFGDEGKRSS--GNPDPSSYSGQTQF----ENKRK 396
Query: 429 RSPTSRGSTEEGMLSF 444
RS E+ +LSF
Sbjct: 397 RSMVLN---EDKVLSF 409
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 664 (238.8 bits), Expect = 5.7e-131, Sum P(3) = 5.7e-131
Identities = 141/216 (65%), Positives = 169/216 (78%)
Query: 470 LEASVVKDPDSSXXXXXXXXXXXXXXX--ANGREEPLNHVEAERQRREKLNQRFYALRAV 527
LEASV K+ +S+ ANGREEPLNHVEAERQRREKLNQRFY+LRAV
Sbjct: 379 LEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAV 438
Query: 528 VPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPS 587
VPNVSKMDKASLLGDAISYI+EL++KLQ AESDKE+LQK++ + KE AG K S
Sbjct: 439 VPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKE-AGNAKSS----- 492
Query: 588 TSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHAS 647
D+ ++ +S LI+++++VKIIGWDAMIRIQ SK+NHP AK M+ALKELDLEVNHAS
Sbjct: 493 VKDRKC-LNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHAS 551
Query: 648 MSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKVGD 683
+SVVNDLMIQQATVKMG++F+TQ+QLK L KVG+
Sbjct: 552 LSVVNDLMIQQATVKMGNQFFTQDQLKVALTEKVGE 587
Score = 572 (206.4 bits), Expect = 5.7e-131, Sum P(3) = 5.7e-131
Identities = 116/232 (50%), Positives = 148/232 (63%)
Query: 65 NQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSS-------MLGWGDXXXXXXXXXXX 117
N++ LQQRLQ LIEG+ E WTYA+FWQSS ++G +LGWGD
Sbjct: 59 NEDNLQQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSR 118
Query: 118 XXXIKTSSAAEQEHRKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFYVT 177
+SAAEQEHRK+V+RELNSLISG WFFL+SMTQSF
Sbjct: 119 KKKSNPASAAEQEHRKRVIRELNSLISGGVGG-GDEAGDEEVTDTEWFFLVSMTQSFV-- 175
Query: 178 XXXXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGS 237
LPGQA+ + +W+SG+ LA S C+RARQGQ++GLQT+VC+ + NGVVELGS
Sbjct: 176 ---KGTGLPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGS 232
Query: 238 TEVIIQNSDLMNKVRFLFNFN-GSMEIGTWPSAMQNPDQGENDPSSWINDPS 288
+E+I Q+SDL++KV FNFN G E G+W + NPDQGENDP WI++P+
Sbjct: 233 SEIIHQSSDLVDKVDTFFNFNNGGGEFGSWAFNL-NPDQGENDPGLWISEPN 283
Score = 399 (145.5 bits), Expect = 4.4e-103, Sum P(3) = 4.4e-103
Identities = 97/163 (59%), Positives = 111/163 (68%)
Query: 422 EDSNKKKRSPTSRGSTEEGMLSFTSGVILPXXXXXXXXXXXXXXXXXXLEASVVKDPDSS 481
EDS+ KKRSP S + EEGMLSFTS +LP LEASV K+ +S+
Sbjct: 346 EDSSNKKRSPVS--NNEEGMLSFTS--VLPCDSNHSD-----------LEASVAKEAESN 390
Query: 482 XXXXXXXXXXXXXXX--ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL 539
ANGREEPLNHVEAERQRREKLNQRFY+LRAVVPNVSKMDKASL
Sbjct: 391 RVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASL 450
Query: 540 LGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDS 582
LGDAISYI+EL++KLQ AESDKE+LQK++ + KE AG K S
Sbjct: 451 LGDAISYISELKSKLQKAESDKEELQKQIDVMNKE-AGNAKSS 492
Score = 84 (34.6 bits), Expect = 5.7e-131, Sum P(3) = 5.7e-131
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 1 MTDYRL----PSTMNLW-TDDNGSVMEAFMS--SDLTGIWPP 35
+TDY L T NLW TDD+ SVMEAF+ SD + ++PP
Sbjct: 8 VTDYHLNQSKTDTTNLWSTDDDASVMEAFIGGGSDHSSLFPP 49
Score = 37 (18.1 bits), Expect = 1.0e-74, Sum P(3) = 1.0e-74
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 422 EDSNKKKRSPTSRGSTE 438
E S KKK +P S E
Sbjct: 115 EKSRKKKSNPASAAEQE 131
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 656 (236.0 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 170/412 (41%), Positives = 215/412 (52%)
Query: 10 MNLWTDDNGSVMEAFMSS-DLTGI-WPPSQSSASTADPMKTHIXXXXX------XXXXXX 61
MNLWTDDN S+MEAFM+S DL W + + P H
Sbjct: 1 MNLWTDDNASMMEAFMASADLPAFPWGAASTPPPPPPPPHHHHQQQQQQVLPPPAAAPAA 60
Query: 62 XFFNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYS-GSSMLGWGDXXXXXXXXXXXXXX 120
FNQ+TLQQRLQ +IEGSRE WTYAIFWQSS D S G+S+LGWGD
Sbjct: 61 AAFNQDTLQQRLQSIIEGSRETWTYAIFWQSSIDVSTGASLLGWGDGYYKGCDDDKRKQR 120
Query: 121 IKT-SSAAEQEHRKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFYVTXX 179
T ++AAEQEHRK+VLRELNSLI+G+ ++P WFFL+SMTQSF
Sbjct: 121 SSTPAAAAEQEHRKRVLRELNSLIAGAGAAPDEAVEEEVTDTE-WFFLVSMTQSF----- 174
Query: 180 XXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTE 239
LPGQA F P W+ A L+++ CDRARQ FGL+T+VC+P A GV+ELGST+
Sbjct: 175 PNGLGLPGQALFAAQPTWI--ATGLSSAPCDRARQAYTFGLRTMVCLPLATGVLELGSTD 232
Query: 240 VIIQNSDLMNKVRFLFNFNGSMEIGTWPSAMQNPDQGENDPSS-WINDPSPTPAPTAGFI 298
VI Q D + ++R LFN + + +WP +PD DPS W+ D P +
Sbjct: 233 VIFQTGDSIPRIRALFNLSAAAA-SSWPP---HPDAASADPSVLWLADAPP--------M 280
Query: 299 EIKDSXXXXXXXXXXXXXXXXPAIG---SGSASNL----SKGIHFELPSSVSLTESVDLQ 351
++KDS I +GS S L S +H PS + Q
Sbjct: 281 DMKDSISAADISVSKPPPPPPHQIQHFENGSTSTLTENPSPSVHAPTPSQPAAPPQRQQQ 340
Query: 352 HQQIPQTQSF-FTRELNFSEYAYDHNSVKNGSSRLFKPESGEILNFAESKRS 402
QQ Q Q F RELNFS++A + + + FKPE+GEILNF S
Sbjct: 341 QQQSSQAQQGPFRRELNFSDFASNGGAA---APPFFKPETGEILNFGNDSSS 389
Score = 562 (202.9 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 143/277 (51%), Positives = 170/277 (61%)
Query: 424 SNKKKRS--PTSRGST---------EEGMLSFTSGVILPXXXXXXXXXXXXXXXXXXLEA 472
SN +KRS TSR S EGMLSF+S LEA
Sbjct: 429 SNNQKRSMEATSRASNTNNHPAATANEGMLSFSSAPTT-RPSTGTGAPAKSESDHSDLEA 487
Query: 473 SVVKDPDSSXXXX-----XXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAV 527
SV ++ +SS ANGREEPLNHVEAERQRREKLNQRFYALRAV
Sbjct: 488 SV-REVESSRVVAPPPEAEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 546
Query: 528 VPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHS-GP 586
VPNVSKMDKASLLGDAISYINELR KL + E+DKE LQ ++ S+KKE +D+ P
Sbjct: 547 VPNVSKMDKASLLGDAISYINELRGKLTALETDKETLQSQMESLKKE-----RDARPPAP 601
Query: 587 STSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHA 646
S D HA ++IE KI+G +AMIR+Q K+NHPAA+LM AL+ELDL+V HA
Sbjct: 602 SGGGGDGGARCHA-----VEIEAKILGLEAMIRVQCHKRNHPAARLMTALRELDLDVYHA 656
Query: 647 SMSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKVGD 683
S+SVV DLMIQQ VKM SR Y+Q+QL L ++ +
Sbjct: 657 SVSVVKDLMIQQVAVKMASRVYSQDQLNAALYTRIAE 693
Score = 45 (20.9 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 273 PDQGE-----NDPSSWINDPSPTP-APTA 295
P+ GE ND SS +PSP P A TA
Sbjct: 375 PETGEILNFGNDSSSGRRNPSPAPPAATA 403
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 670 (240.9 bits), Expect = 5.1e-121, Sum P(2) = 5.1e-121
Identities = 161/317 (50%), Positives = 202/317 (63%)
Query: 376 NSVKNGSSRLFKPESGEILNFA-ESKRSSC------TXXXXXXXXXXHSQFVAEDSNKKK 428
NS K+ S ++ K E +I + ++++SSC T F +S+KK+
Sbjct: 291 NS-KSDSHQISKLEKNDISSVENQNRQSSCLVEKDLTFQGGLLKSNETLSFCGNESSKKR 349
Query: 429 RSPTSRGSTEEGMLSFTSGVILPXXXXXXXXXXXXXXXXXXLEASVVKDPDSSXXXXXXX 488
S + + +EGMLSF++ V LEASVVK+
Sbjct: 350 TSVSKGSNNDEGMLSFSTVV----------RSAANDSDHSDLEASVVKEA-IVVEPPEKK 398
Query: 489 XXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIN 548
ANGREEPLNHVEAERQRREKLNQRFY+LRAVVPNVSKMDKASLLGDAISYIN
Sbjct: 399 PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYIN 458
Query: 549 ELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKL--IDLD 606
EL++KLQ AESDKE++QK+L + KE GK G + ++ K SN S I+++
Sbjct: 459 ELKSKLQQAESDKEEIQKKLDGMSKE-GNNGK----GCGSRAKERKSSNQDSTASSIEME 513
Query: 607 IEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSR 666
I+VKIIGWD MIR+Q KK+HP A+ M+ALKELDLEVNHAS+SVVNDLMIQQATVKMGS+
Sbjct: 514 IDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQ 573
Query: 667 FYTQEQLKNVLAAKVGD 683
F+ +QLK L KVG+
Sbjct: 574 FFNHDQLKVALMTKVGE 590
Score = 541 (195.5 bits), Expect = 5.1e-121, Sum P(2) = 5.1e-121
Identities = 115/237 (48%), Positives = 149/237 (62%)
Query: 64 FNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSS-----MLGWGDXXXXXXXXXXXX 118
FN++TLQQRLQ LIE + E WTYAIFWQ S D+ S+ +LGWGD
Sbjct: 47 FNEDTLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEEDKEKK 106
Query: 119 XXIKTSSAAEQEHRKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFYVTX 178
++ AEQEHRK+V+RELNSLISG WFFL+SMTQSF
Sbjct: 107 K--NNTNTAEQEHRKRVIRELNSLISGGIGV-SDESNDEEVTDTEWFFLVSMTQSFV--- 160
Query: 179 XXXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGST 238
LPG+++ + +W+SG+ L SGC+RA QGQ++GL+T+VCI + NGVVELGS+
Sbjct: 161 --NGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSS 218
Query: 239 EVIIQNSDLMNKVRFLFNFNGS-----MEIGTWPSAMQNPDQGENDPSSWINDPSPT 290
EVI Q+SDLM+KV LFNFN +E +W + NPDQGENDP+ WI++P+ T
Sbjct: 219 EVISQSSDLMHKVNNLFNFNNGGGNNGVEASSWGFNL-NPDQGENDPALWISEPTNT 274
Score = 37 (18.1 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 337 ELPSSVSLTESVDLQHQ 353
EL SS +++S DL H+
Sbjct: 214 ELGSSEVISQSSDLMHK 230
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 482 (174.7 bits), Expect = 4.2e-89, Sum P(3) = 4.2e-89
Identities = 104/186 (55%), Positives = 139/186 (74%)
Query: 497 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS 556
A+GR++PLNHVEAER RREKLN RFYALRAVVPNVSKMDK SLL DA+ YINEL++K ++
Sbjct: 335 AHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAEN 394
Query: 557 AESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKII-GWD 615
E +K ++ + +K E+AG ++ PS K AS++ + IEVKI+ D
Sbjct: 395 VELEKHAIEIQFNELK-EIAG---QRNAIPSVC----KYEEKASEM--MKIEVKIMESDD 444
Query: 616 AMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKN 675
AM+R++S K +HP A+LM AL +L+LEVNHAS+SV+NDLMIQQA VKMG R Y QE+L++
Sbjct: 445 AMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEELRD 504
Query: 676 VLAAKV 681
+L +K+
Sbjct: 505 LLMSKI 510
Score = 386 (140.9 bits), Expect = 4.2e-89, Sum P(3) = 4.2e-89
Identities = 96/239 (40%), Positives = 131/239 (54%)
Query: 66 QETLQQRLQQLIEGSREGWTYAIFWQSSCD-YSGSSMLGWGDXXXXXXXXXXXXXXI--- 121
+ TL +RL ++ G+ E W+YAIFW+ S D +SG ++L WGD +
Sbjct: 31 ETTLPKRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRK 90
Query: 122 KT--SSAAEQEHRKKVLRELNSLISGST----SSPXXXXXXXXXXXXXWFFLISMTQSFY 175
KT SS E+E R V+RELN +ISG WFFL+SMT SF
Sbjct: 91 KTILSSPEEKERRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSF- 149
Query: 176 VTXXXXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVEL 235
L G+A+ +PV V+G++ + SGCDRA+QG GLQT++CIPS NGV+EL
Sbjct: 150 ----GNGSGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLEL 205
Query: 236 GSTEVIIQNSDLMNKVRFLFNFNGSMEIGTWPSAMQN--PDQGENDPSSWIN-DPSPTP 291
STE I NSDL N++RFLF GS P++ P Q E+ SS + +P+P+P
Sbjct: 206 ASTEEIRPNSDLFNRIRFLFG--GSKYFSGAPNSNSELFPFQLESSCSSTVTGNPNPSP 262
Score = 54 (24.1 bits), Expect = 4.2e-89, Sum P(3) = 4.2e-89
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 14 TDDNGSVMEAFMSSDLTGIWPPSQSSASTADPMKTH 49
TDDN ++EA ++SD + P+ S T P + H
Sbjct: 4 TDDNLLMIEALLTSDPSPPLLPANLSLETTLPKRLH 39
Score = 44 (20.5 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 324 SGSASNLSKGIHFELPSSVSLTESVDLQHQQIPQTQSFFTRELNFSEYAYDHNSVKNGSS 383
SG+ ++ S+ F+L SS S T + + + Q+ + LNFS SS
Sbjct: 232 SGAPNSNSELFPFQLESSCSSTVTGNPNPSPV-YLQNRYN--LNFS----------TSSS 278
Query: 384 RLFKPESGEILNFAESKRSS 403
L + G++L+F E+ + S
Sbjct: 279 TLARAPCGDVLSFGENVKQS 298
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 352 (129.0 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 76/177 (42%), Positives = 114/177 (64%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKED 563
L+HVEAE+QRREKLN RFYALRA+VP VS+MDKASLL DA+SYI L++K+ +D
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKI-------DD 300
Query: 564 LQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKL---IDLDIEVKIIGWDAMIRI 620
L+ E+ +K +S S S S + +++ SK DL+++VKI+G +A+IR+
Sbjct: 301 LETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRV 360
Query: 621 QSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKNVL 677
Q+ NHP + LM AL E+D V HA+ S ++ +M+Q V + ++++L+ L
Sbjct: 361 QTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPEGLRSEDRLRTTL 417
Score = 151 (58.2 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 174 FYVTXXXXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVV 233
FY P + S VW++G + L S +RA++ G+ TLV IP NG++
Sbjct: 108 FYAASFYGEDRSPRKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINNGII 167
Query: 234 ELGSTEVIIQNSDLMNKVRFLF 255
ELGS+E IIQN + +N+V+ +F
Sbjct: 168 ELGSSESIIQNRNFINRVKSIF 189
Score = 84 (34.6 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 69 LQQRLQQLIEGSREGWTYAIFWQSSCD-YSGSSMLGWGD 106
LQQ+L+ ++E S + W Y IFWQ D S S L W D
Sbjct: 35 LQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVD 73
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 279 (103.3 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 55/73 (75%), Positives = 63/73 (86%)
Query: 497 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS 556
ANGREEPLNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDAISYI EL+ K++
Sbjct: 387 ANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKI 446
Query: 557 AESDKEDLQKELA 569
E ++ K L+
Sbjct: 447 MEDERVGTDKSLS 459
Score = 208 (78.3 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 59/200 (29%), Positives = 91/200 (45%)
Query: 67 ETLQQRLQQLIEGSRE---GWTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXXXXIKT 123
+TL ++L L++ W YAIFWQ + SG +LGWGD +++
Sbjct: 46 DTLNKKLSSLVDWPNSENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRS 105
Query: 124 ----SSAAEQEH----RKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFY 175
+ AE+E RK+VL++L+ L GS FFL SM F+
Sbjct: 106 YNFNNMGAEEETWQDMRKRVLQKLHRLFGGSDEDNYALSLEKVTATEI-FFLASMY--FF 162
Query: 176 VTXXXXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVEL 235
PG+ Y VW+S A + C R+ + G++T+V +P+ GV+EL
Sbjct: 163 FNHGEGG---PGRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLEL 219
Query: 236 GSTEVIIQNSDLMNKVRFLF 255
GS + +N L+ V+ LF
Sbjct: 220 GSVWSLPENIGLVKSVQALF 239
Score = 110 (43.8 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 31/131 (23%), Positives = 63/131 (48%)
Query: 557 AESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDA 616
++ DK L + S KEL K +D+ L SN + +++++ + +
Sbjct: 422 SKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSLSESNTITVEESPEVDIQAMNEEV 481
Query: 617 MIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM--GSRFYTQEQLK 674
++R+ S +HPA++++QA++ ++ + A +S+ D M +K GS T+E+L
Sbjct: 482 VVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNGSDPLTKEKLI 541
Query: 675 NVLAAKVGDTQ 685
+ TQ
Sbjct: 542 AAFYPETSSTQ 552
Score = 40 (19.1 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 574 ELAGGGKDSHSGPSTSDQDLKMSNHASK 601
E AG + S PST+ Q K + K
Sbjct: 332 EFAGSSVAASSNPSTNTQQEKSESCTEK 359
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 275 (101.9 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 54/68 (79%), Positives = 61/68 (89%)
Query: 497 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS 556
ANGR E LNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDA+SYINEL KL+
Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 557 AESDKEDL 564
E+++E L
Sbjct: 485 MEAERERL 492
Score = 213 (80.0 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 61/199 (30%), Positives = 90/199 (45%)
Query: 65 NQETLQQRLQQLIE---GSREGWTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXXXXI 121
+ E LQ +L L+E S W YAIFWQ S +G +L WGD +
Sbjct: 44 SDENLQNKLSDLVERPNASNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIV 103
Query: 122 KTSSAAEQE--H---RKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFYV 176
+ S +E H RK+VL++L+ L GS FL+S S Y
Sbjct: 104 RILSMGREEETHQTMRKRVLQKLHDLFGGSEEENCALGLDRVTDTE--MFLLS---SMYF 158
Query: 177 TXXXXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELG 236
+ PG+ + PVW+S + C R+ + G+QT+V +P+ GVVELG
Sbjct: 159 SFPRGEGG-PGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELG 217
Query: 237 STEVIIQNSDLMNKVRFLF 255
ST + ++ D + +R LF
Sbjct: 218 STSCLPESEDSILSIRSLF 236
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 262 (97.3 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 50/70 (71%), Positives = 63/70 (90%)
Query: 497 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS 556
ANGREE LNHVEAERQRREKLNQRFYALRAVVPN+SKMDKASLL DAI+YI +++ K++
Sbjct: 312 ANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRV 371
Query: 557 AESDKEDLQK 566
E++K+ +++
Sbjct: 372 YETEKQIMKR 381
Score = 154 (59.3 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 57/235 (24%), Positives = 94/235 (40%)
Query: 65 NQETLQQRLQQLIEGSREGWTYAIFW-QSSCDYSGSSMLGWGDXXXXXXXXXXXXXXIKT 123
+ LQQ L+ ++EGS W YA+FW S+ + S +L WGD
Sbjct: 46 SDSNLQQGLRHVVEGS--DWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDY--- 100
Query: 124 SSAAEQEHRKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFYVTXXXXXX 183
+ + E +++VLR+L+ GS F+L S+ SF
Sbjct: 101 --SQQDEIKRRVLRKLHLSFVGSDED-HRLVKSGALTDLDMFYLASLYFSFRCDTNKYG- 156
Query: 184 XLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQ 243
P Y P+W + + R+ + G QT++ +P +GVVELGS I +
Sbjct: 157 --PAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPE 214
Query: 244 NSDLMNKVRFLFNFNGSMEIGTWPSAM-QNPDQGENDPSSWINDPSPTPAPTAGF 297
+ ++ V+ +F + ++ P + G P S + SP GF
Sbjct: 215 DKSVIEMVKSVFGGSDFVQAKEAPKIFGRQLSLGGAKPRSMSINFSPKTEDDTGF 269
Score = 81 (33.6 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 18/68 (26%), Positives = 41/68 (60%)
Query: 615 DAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVK-MGSRFYTQEQL 673
DA++R+ + HP +K++Q L+E ++ + +++++ + ++ T++ G T EQL
Sbjct: 400 DAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGG--CTAEQL 457
Query: 674 KNVLAAKV 681
K+ L A +
Sbjct: 458 KDKLLASL 465
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 182 (69.1 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 502 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDK 561
E L+HV AER+RREKLN++F LR++VP V+KMDK S+LGD I+Y+N LR ++ E+
Sbjct: 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTH 419
Query: 562 EDLQ-KELASVKKE 574
+ Q K + K++
Sbjct: 420 HEQQHKRTRTCKRK 433
Score = 182 (69.1 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 53/193 (27%), Positives = 91/193 (47%)
Query: 70 QQRLQQLIEGSREG--WTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXXXXIKTSSAA 127
++ LQ L++ + + WTY++FWQ C +L WG+ +A
Sbjct: 17 KKELQGLLKTAVQSVDWTYSVFWQF-CPQQ--RVLVWGNGYYNGAIKTRKTTQPAEVTAE 73
Query: 128 EQE-HRKKVLREL-NSLISGSTSSPXXXXXXXX---XXXXXWFFLISMTQSFYVTXXXXX 182
E R + LREL +L++G ++S WF+L+ ++ SF
Sbjct: 74 EAALERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSG--- 130
Query: 183 XXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVII 242
+PG+AY VW+SGA + + RA + +QT+VCIP +GVVELG+T+ +
Sbjct: 131 --MPGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVR 188
Query: 243 QNSDLMNKVRFLF 255
++ + + + F
Sbjct: 189 EDVEFVELTKSFF 201
Score = 57 (25.1 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 590 DQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMS 649
+Q K + + ++EV II D ++ ++ ++ ++Q L EL +E S
Sbjct: 421 EQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTS 480
Query: 650 VVND 653
V ND
Sbjct: 481 V-ND 483
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 16/79 (20%), Positives = 32/79 (40%)
Query: 215 GQVFGLQTLVCIPSANGVVELGSTEVIIQNSDLMNKVRFLFNFNGSMEIGTWPSAMQNPD 274
G+ + + V + AN V + I+ S + V + +G +E+GT ++ +
Sbjct: 133 GKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVE 192
Query: 275 QGENDPSSWINDPSPTPAP 293
E S + + P P
Sbjct: 193 FVELTKSFFYDHCKTNPKP 211
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 185 (70.2 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 50/190 (26%), Positives = 98/190 (51%)
Query: 501 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESD 560
EE NH +E++RREKLN+RF LR+++P++SK+DK S+L D I Y+ +L+ ++Q ES
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESC 460
Query: 561 KE--DLQKELASVKK------ELAGGGKDSHSGPSTSDQDLKMSNHA----SKLIDLDIE 608
+E D + + +K+ E +S SD ++ A + L D ++
Sbjct: 461 RESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTD-NLR 519
Query: 609 VKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVK-MGSRF 667
+ +G + +I ++ + + ++M + +L+L+ + S + L+ K G++
Sbjct: 520 ISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCLTVNCKHKGTKI 579
Query: 668 YTQEQLKNVL 677
T ++ L
Sbjct: 580 ATTGMIQEAL 589
Score = 159 (61.0 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 53/189 (28%), Positives = 79/189 (41%)
Query: 84 WTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXXXXIKTSSAAEQE------HRKKVLR 137
W+Y IFW S G +L WGD KT AAE + R + LR
Sbjct: 26 WSYGIFWSVSASQPG--VLEWGDGYYNGDIKTR-----KTIQAAEVKIDQLGLERSEQLR 78
Query: 138 EL-------NSLISGSTSSPXXXXXXXXX----XXXXWFFLISMTQSFYVTXXXXXXXLP 186
EL S SGS+ W++L+ M+ F + +P
Sbjct: 79 ELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFNI-----GEGIP 133
Query: 187 GQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQNSD 246
G A P+W+ AE + R+ + LQT+VC P GV+E+G+TE I ++ +
Sbjct: 134 GGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEHIKEDMN 193
Query: 247 LMNKVRFLF 255
++ V+ LF
Sbjct: 194 VIQSVKTLF 202
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 198 (74.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 57/204 (27%), Positives = 96/204 (47%)
Query: 84 WTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXXXXIKTSSAAEQE-HRKKVLRELN-S 141
W+Y IFW +S G +L W D ++ +A + R + L EL S
Sbjct: 32 WSYTIFWSTSTSLPG--VLTWNDGFYNGEVKTRKISNLEDLTADQLVLRRSEQLSELYYS 89
Query: 142 LISGSTS----SPXXXXXXXXXXXXXWFFLISMTQSFYVTXXXXXXXLPGQAYFGNSPVW 197
L+SG P W++++ MT +F LPG++Y N VW
Sbjct: 90 LLSGECDHRARKPVAALSPEDIADTEWYYVVCMTYAF-----RPGQGLPGRSYASNRSVW 144
Query: 198 VSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQNSDLMNK-VRFL-- 254
+ A+ + RA + +QT+VCIP +GV+ELG+T+ + ++ +L+N+ V +L
Sbjct: 145 LCNAQSADSKTFLRALLAKSASIQTIVCIPFMSGVLELGTTDPVSEDPNLVNRIVAYLKE 204
Query: 255 FNFNGSMEIGTWPSAMQNPDQGEN 278
F +E+ PS+ +PD+ E+
Sbjct: 205 LQFPICLEV---PSSTPSPDETED 225
Score = 140 (54.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 25/59 (42%), Positives = 43/59 (72%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKED 563
+HV +ER+RREKLN+ F L++++P+V K+DKAS+L + I+Y+ L +++ ES +
Sbjct: 378 SHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELESSSRE 436
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 268 (99.4 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 72/185 (38%), Positives = 103/185 (55%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKED 563
++HVEAERQRREKLN+RF LRA VP VS+MDKASLL DA +YI ELR ++ ESD
Sbjct: 110 VSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLESDAR- 168
Query: 564 LQKELASVKKELAGGGKDS--HSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAM-IRI 620
Q A + GGG ++ H G A+ +D +EV+ +G DA +R+
Sbjct: 169 -QAAAARFEPSSCGGGGNASYHGGGG--------GGGAAPGLDEAVEVRKMGRDAAAVRV 219
Query: 621 QSSKKNHPAAKLMQALKELDLEVNHAS-MSVVNDLMIQQATVKMGSRFYTQEQLKNVLAA 679
++ H A+LM AL+ L+L V HA M V +Q+ V + + + L+ L
Sbjct: 220 TTTGARHAPARLMGALRSLELPVQHACVMRVHGATTVQEVLVDVPAALQDGDALRAALLQ 279
Query: 680 KVGDT 684
++ D+
Sbjct: 280 RLQDS 284
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 172 (65.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 54/171 (31%), Positives = 86/171 (50%)
Query: 500 REEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAES 559
R+E NH E++RREKLN+RF LR ++P+++K+DK S+L D I Y+ EL ++Q ES
Sbjct: 436 RDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
Query: 560 DKEDLQKELASV-----KKELAGGGKDS-HSGPSTSDQDLKMS-NHASKLIDLDIEVKII 612
+E E KK G + S + + + K+S N+ + D
Sbjct: 496 CRESTDTETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPAD--TGFT 553
Query: 613 GWDAMIRIQSSKKNHPAAKLMQALKE-LDLEVNHASMSVVNDLMIQQATVK 662
G +RI S N +L A +E + LE+ M V++DL + +V+
Sbjct: 554 GLTDNLRI-GSFGNEVVIELRCAWREGVLLEI----MDVISDLHLDSHSVQ 599
Score = 144 (55.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 50/208 (24%), Positives = 87/208 (41%)
Query: 65 NQETLQQRLQQLIEGSREG--WTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXXXXIK 122
N+ T+ + L++ + S W+Y IFW S SG +L WGD
Sbjct: 6 NRTTVPENLKKHLAVSVRNIQWSYGIFWSVSASQSG--VLEWGDGYYNGDIKTRKTIQAS 63
Query: 123 TSSAAEQE-HRKKVLREL-NSL-ISGSTSSPXXXXXXXXXXXXX------------WFFL 167
A + R + L EL SL ++ S+SS W++L
Sbjct: 64 EIKADQLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYL 123
Query: 168 ISMTQSFYVTXXXXXXXLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIP 227
+ M+ F + +PG+ + P+W+ A + R+ + ++T+VC P
Sbjct: 124 VCMSFVFNI-----GEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFP 178
Query: 228 SANGVVELGSTEVIIQNSDLMNKVRFLF 255
GVVE+G+TE I ++ +++ V+ F
Sbjct: 179 FLGGVVEIGTTEHITEDMNVIQCVKTSF 206
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 162 (62.1 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 44/155 (28%), Positives = 81/155 (52%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL 564
NHV +ER+RREKLN+ F L+++VP++ K+DKAS+L + I+Y+ L +++ ES E
Sbjct: 392 NHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESSSEPS 451
Query: 565 QK---ELASVKK-ELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRI 620
+ E ++ E+ G S G S + +H +++ + K++ ++ +
Sbjct: 452 HQRATETGQQRRCEITGKELVSEIGVSGGGDAGREHHH----VNVTVTDKVV----LLEV 503
Query: 621 QSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLM 655
Q K ++ A+K L L+V S + L+
Sbjct: 504 QCRWKELVMTRVFDAIKSLCLDVLSVQASAPDGLL 538
Score = 150 (57.9 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 84 WTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXXXXIKTSSAAEQE-HRKKVLRELN-S 141
W+YAIFW S G +L W D +A + R + LREL S
Sbjct: 32 WSYAIFWSISTSCPG--VLTWNDGFYNGVVKTRKISNSADLTAGQLVVQRSEQLRELYYS 89
Query: 142 LISGSTSS----PXXXXXXXXXXXXXWFFLISMTQSFYVTXXXXXXXLPGQAYFGNSPVW 197
L+SG P W++++ MT SF LPG++Y N+ VW
Sbjct: 90 LLSGECDHRARRPIAALSPEDLADTEWYYVVCMTYSFQP-----GQGLPGKSYASNASVW 144
Query: 198 VSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTE 239
+ A+ + R+ + T++CIP +GV+ELG+T+
Sbjct: 145 LRNAQSADSKTFLRSLLAK-----TIICIPFTSGVLELGTTD 181
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 228 (85.3 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 66/190 (34%), Positives = 96/190 (50%)
Query: 474 VVKDPDSSXXXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSK 533
V ++P ++ G P+ HVEAERQRREKLN+RF LRA VP VS+
Sbjct: 63 VPRNPPATTTTTKRRGRKPGPRSGGGGAPPIGHVEAERQRREKLNRRFCELRAAVPTVSR 122
Query: 534 MDKASLLGDAISYINELRTKLQ--SAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQ 591
MDKASLL DA+ YI ELR +++ AE+ + L A+ AG G +G D
Sbjct: 123 MDKASLLADAVDYIAELRRRVERLEAEARRAPLAPSAAAAAAWAAGLG----AGAIGRD- 177
Query: 592 DLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVV 651
DL + ++I D + + ++ H A++M A++ L+L V HAS++ V
Sbjct: 178 DLVV-----RMIGRDAAI------LRLTTAAAAARHAPARMMCAVRALNLAVQHASVARV 226
Query: 652 NDLMIQQATV 661
+Q V
Sbjct: 227 GGATVQDVMV 236
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 228 (85.3 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 51/144 (35%), Positives = 88/144 (61%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL 564
+H+ AER+RREKL QRF AL A++P + KMDKAS+LGDAI +I L+ ++ E K++
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEK 185
Query: 565 QKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSK 624
E + K+ + ++H S+S D ++ +S L + IEV++ G D +I+I K
Sbjct: 186 TMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPE--IEVRVSGKDVLIKILCEK 243
Query: 625 KNHPAAKLMQALKELDLEVNHASM 648
+ K+M +++L L + ++++
Sbjct: 244 QKGNVIKIMGEIEKLGLSITNSNV 267
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 163 (62.4 bits), Expect = 3.9e-14, Sum P(4) = 3.9e-14
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 500 REEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAES 559
+ + ++EAER+RR+KLN Y LR++VPN++KMD+AS+LGDAI YI L+ +++ +
Sbjct: 280 KRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQD 339
Query: 560 DKED 563
+ ED
Sbjct: 340 ELED 343
Score = 67 (28.6 bits), Expect = 3.9e-14, Sum P(4) = 3.9e-14
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 188 QAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQNSDL 247
QA N P+W S +E + A G G +T + +P A G+VEL ++ + + +
Sbjct: 93 QALLSNQPIWQSSSEE------EEADGGG--GAKTRLLVPVAGGLVELFASRYMAEEQQM 144
Query: 248 MNKVRFLFNFNGSMEIG---TWP 267
V G+ + G WP
Sbjct: 145 AELVMAQCGGGGAGDDGGGQAWP 167
Score = 59 (25.8 bits), Expect = 3.9e-14, Sum P(4) = 3.9e-14
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 68 TLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSSMLGW 104
+L L+ L+ GS +GW Y I+W+ S D M G+
Sbjct: 27 SLDAALRPLV-GS-DGWDYCIYWRLSPDQRFLEMTGF 61
Score = 51 (23.0 bits), Expect = 3.9e-14, Sum P(4) = 3.9e-14
Identities = 15/76 (19%), Positives = 36/76 (47%)
Query: 582 SHSGPSTSDQDLKMSNHASKLIDLDIEVKII-GWDAMIRIQSSKKNHPAAKLMQALKELD 640
S+ P+ +D + ++ +EV+ + G + +++ K +LM A+ L
Sbjct: 393 SNKDPAMTDDKVGGGGGGGHRMEPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALG 452
Query: 641 LEVNHASMSVVNDLMI 656
LEV + +++ L++
Sbjct: 453 LEVINVNVTTYKTLVL 468
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 205 (77.2 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 57/195 (29%), Positives = 102/195 (52%)
Query: 499 GREEP---LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
GR EP HV AER+RR+KLN+R AL A++P + K DKA++L DAI ++ +L+ +++
Sbjct: 123 GRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVK 182
Query: 556 SAESDK---EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLD-----I 607
E ++ + + + + VK+ DS S ST +S+ + ++ I
Sbjct: 183 KLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMI 242
Query: 608 EVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEV-NHASMSVVNDLMIQQATVKMGSR 666
E ++ D +IR+ K K++ +L++ LEV N ++ N ++ KM ++
Sbjct: 243 EARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNK 302
Query: 667 FY--TQEQLKNVLAA 679
F +E +KN+ A
Sbjct: 303 FSRPVEEVVKNIRVA 317
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 174 (66.3 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 43/160 (26%), Positives = 84/160 (52%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL 564
NHV +ER+RREKL + F L++VVP++ K+DKAS+L + I+Y+ EL +++ ES +
Sbjct: 244 NHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQPS 303
Query: 565 QKELASVK--------KELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKII-GWD 615
+ + + + K+++ G + P+ D D + + S ++ V I+ +
Sbjct: 304 PRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDGERRHCVS-----NVNVTIMDNKE 358
Query: 616 AMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLM 655
++ +Q K ++ A+K + L+V S + L+
Sbjct: 359 LLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLL 398
Score = 67 (28.6 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 12/37 (32%), Positives = 27/37 (72%)
Query: 216 QVFGLQTLVCIPSA-NGVVELGSTEVIIQNSDLMNKV 251
Q ++T+VC+P +GV+ELG+T+ + ++ L++++
Sbjct: 14 QSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRI 50
Score = 55 (24.4 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 262 EIGTWPSAMQNPDQGENDPSSWINDP--SPTPAPTAGFIEIKDS 303
+IG S + D ++D SSW+ DP S PTA ++ D+
Sbjct: 124 DIGELYSLCEELDVLDDDSSSWVADPWSSFQLVPTAEATDVDDA 167
Score = 46 (21.3 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 230 NGVVELGSTEVIIQNSDLMNKVRFLFNFNGSMEIGTWPSAMQNPDQGENDPSS-WINDPS 288
NG +L ++ Q++ + V F +G +E+GT ++P + +S W P
Sbjct: 5 NGAADLPTS----QSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRITASLWDTPPR 60
Query: 289 PTPAPTAGFIEI 300
+ AG +I
Sbjct: 61 AAFSSEAGVADI 72
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 201 (75.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 52/145 (35%), Positives = 88/145 (60%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL 564
+H+ AER+RREKL QRF AL A+VP + KMDKAS+LGDA+ +I L+ ++ E K++
Sbjct: 152 DHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKER 211
Query: 565 QKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDL-DIEVKIIGWDAMIRIQSS 623
+ E + K+ D++ S+S +D S+ +DL +IEV+ D +I+I
Sbjct: 212 RLESMVLVKKSKLILDDNNQSFSSSCED-GFSD-----LDLPEIEVRFSDEDVLIKILCE 265
Query: 624 KKNHPAAKLMQALKELDLEVNHASM 648
K+ AK+M +++L + + ++S+
Sbjct: 266 KQKGHLAKIMAEIEKLHILITNSSV 290
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 201 (75.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 50/162 (30%), Positives = 87/162 (53%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL 564
+H+ AER+RREK+NQRF L V+P + KMDKA++LGDA+ Y+ EL+ K+++ E +++
Sbjct: 167 DHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLE-EEDGG 225
Query: 565 QKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSK 624
+ A V ++ + G+ S +G + + +IEV++ ++R+Q
Sbjct: 226 GRPAAMVVRKSSCSGRQSAAGDGDGEGRVP-----------EIEVRVWERSVLVRVQCGN 274
Query: 625 KNHPAAKLMQALKELDLEVNHAS-MSVVNDLMIQQATVKMGS 665
+L+ ++EL L + H S M +I T K S
Sbjct: 275 SRGLLVRLLSEVEELRLGITHTSVMPFPASTVIITITAKASS 316
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 139 (54.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 49/187 (26%), Positives = 74/187 (39%)
Query: 84 WTYAIFWQSSCDYSGSSMLGWGDX---XXXXXXXXXXXXXIKTSSAAEQEHRKKVLRELN 140
W+YAIFW SS G +L WG+ K +E RK L L
Sbjct: 36 WSYAIFWSSSLTQPG--VLEWGEGCYNGDMKKRKKSYESHYKYGLQKSKELRKLYLSMLE 93
Query: 141 SLISGST---------------SSPXXXXXXXXXXXXXWFFLISMTQSFYVTXXXXXXXL 185
SG+T S W++L+SM+ F L
Sbjct: 94 G-DSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVF-----SPSQCL 147
Query: 186 PGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQNS 245
PG+A +W+ A+ N R+ + +QT+VC P GV+ELG TE+I ++
Sbjct: 148 PGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIELGVTELISEDH 207
Query: 246 DLMNKVR 252
+L+ ++
Sbjct: 208 NLLRNIK 214
Score = 116 (45.9 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 38/163 (23%), Positives = 77/163 (47%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDK-- 561
LN + +R+E N++F LR +VP V+++DK S+L + I Y+ EL +++ ES
Sbjct: 338 LNQDDPSDRRKE--NEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGS 395
Query: 562 ----EDLQKELASVK-----KELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKII 612
E +K ++ +E +G DS S + +++ K + VK+
Sbjct: 396 VNFVERQRKTTENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDKT---HLRVKLK 452
Query: 613 GWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLM 655
+ +I ++ S +++ A +M+ L L ++ +N +
Sbjct: 453 ETEVVIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLNKFL 495
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 197 (74.4 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 46/145 (31%), Positives = 74/145 (51%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
H+ AER+RREK+NQRF L V+P + KMDKA++L DA+ Y+ E++ KL E +
Sbjct: 193 HIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELEQHQNGGV 252
Query: 566 KELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDL-DIEVKIIGWDAMIRIQSSK 624
+ +KK P+ S S+ + L +IE KI + M+RI
Sbjct: 253 ESAILLKKPCIATSSSDGGCPAASSAVAGSSSSGTARSSLPEIEAKISHGNVMVRIHGEN 312
Query: 625 KNHPA-AKLMQALKELDLEVNHASM 648
+ +L+ A++ L L + H ++
Sbjct: 313 NGKGSLVRLLAAVEGLHLGITHTNV 337
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 202 (76.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 61/196 (31%), Positives = 108/196 (55%)
Query: 498 NGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSA 557
+G+ ++ AER+RR+KLN R YALR++VP ++K+D+AS+LGDAI+Y+ EL+ + +
Sbjct: 307 SGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKEL 366
Query: 558 ESD-KEDLQKELASVKKE----LAG----G---GKDSHSG-PSTS-DQDLKMSNHASKLI 603
+ + +E+ + E S + + L G G G +S PS D DL+ SN + +
Sbjct: 367 QDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEM 426
Query: 604 DLDIEV-KIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVK 662
+ ++V ++ G + +++ K +LM+AL L LEV +A+ + L+ V+
Sbjct: 427 EPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVE 486
Query: 663 MGSRFYTQ-EQLKNVL 677
Q E ++N L
Sbjct: 487 KNDNEMVQAEHVRNSL 502
Score = 44 (20.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 222 TLVCIPSANGVVELGSTEVIIQNSDLMNKV 251
T V IP G+VEL +T + ++ ++++ V
Sbjct: 119 TRVLIPIPGGLVELFATRHVAEDQNVVDFV 148
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 187 (70.9 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 47/145 (32%), Positives = 86/145 (59%)
Query: 509 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKEL 568
+ER+RR ++ + YALR++VPN++KMDKAS++GDA+ Y+ EL+++ + +SD L+ L
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASL 194
Query: 569 ASVKKELAGGGKDSHSGPSTSDQDLKMSNH--ASKLIDLD-IEVKIIGWDAMIRIQSSKK 625
S GG H+ + Q + N + K+I +D I+V+ G+ +R+ +K
Sbjct: 195 NST------GGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGF--YVRLVCNKG 246
Query: 626 NHPAAKLMQALKEL-DLEVNHASMS 649
A L ++L+ L +V ++++S
Sbjct: 247 EGVAPSLYKSLESLTSFQVQNSNLS 271
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 189 (71.6 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKE-D 563
NHV +ER+RREKLN+ F L+++VP++ K+DKAS+L + I+Y+ EL ++Q ES K+
Sbjct: 188 NHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVS 247
Query: 564 LQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAM-IRIQS 622
+ + + GGG + + + + + + D+ V ++ D + + +Q
Sbjct: 248 RPAKRKPCSETIIGGGGGGGGAGAVKEHHHWVLSESQEGTPSDVRVIVMDKDELHLEVQC 307
Query: 623 SKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGS 665
K ++ A+K L L+V S + L+ + K S
Sbjct: 308 RWKELMMTRVFDAIKSLRLDVVSVQASAPDGLLGLKIRAKYAS 350
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 188 (71.2 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 502 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDK 561
+P ++ AER+RR++LN R LR++VP +SKMD+ S+LGDAI Y+ EL K+ + ++
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 562 EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQ 621
++L S +L G KD ++ ++ L + N ID E D + I
Sbjct: 235 QELGNSNNSHHSKLFGDLKDLNA-----NEPL-VRNSPKFEIDRRDE------DTRVDIC 282
Query: 622 SSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSR---FYTQEQLKNVLA 678
S K + L+ L LE+ +S +D +Q A+ G+ F T E +K L
Sbjct: 283 CSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQ-ASCSEGAEQRDFITSEDIKQALF 341
Query: 679 AKVG 682
G
Sbjct: 342 RNAG 345
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 165 (63.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 51/174 (29%), Positives = 92/174 (52%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
++EAER+RREKL+ R ALR+ VP V+ M KAS++ DAI+YI EL+ +++ +++
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEME 92
Query: 566 KELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKL-IDLDIEVKIIGWDAM-IRIQSS 623
+ + +E D P DL + KL I+ ++++ IG ++I +
Sbjct: 93 EAPPEIDEEQT----DPMIKPEVETSDL--NEEMKKLGIEENVQLCKIGERKFWLKIITE 146
Query: 624 KKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKNVL 677
K++ K M+ ++ L E+ S++ N ++ A+V+ EQ K+ L
Sbjct: 147 KRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQT-QELCDVEQTKDFL 199
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 183 (69.5 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 46/139 (33%), Positives = 77/139 (55%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
++ +ER+RRE++NQ Y LRAVVP ++K++K + DA+ YINEL + Q E + + +
Sbjct: 265 NLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGIN 324
Query: 566 KELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGW-DAMIRIQSSK 624
E+ KE+A + + + P K SN K ++ IEV G D +IR+
Sbjct: 325 -EMEC--KEIAAEEQSAIADPEAERVSSK-SNKRVKKNEVKIEVHETGERDFLIRVVQEH 380
Query: 625 KNHPAAKLMQALKELDLEV 643
K +L++A+ +LE+
Sbjct: 381 KQDGFKRLIEAVDLCELEI 399
Score = 44 (20.5 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 187 GQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVEL 235
G+ SP W L NSG ++F T V +P ++G+VEL
Sbjct: 106 GEVVMSKSPKW------LVNSGSKM----EMFS--TRVLVPVSDGLVEL 142
Score = 39 (18.8 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 350 LQHQQIPQTQSFFTRELNFSEYAYDHNSVKNGSS 383
LQ + IP+ + + +N S +SV N SS
Sbjct: 174 LQFRIIPRAEESMSSGVNLSVEGGGSSSVSNPSS 207
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 189 (71.6 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 55/183 (30%), Positives = 93/183 (50%)
Query: 510 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINEL-RT--KLQSAESDKE--DL 564
ER+RRE+LN +F LR + PN +K D+AS++GDAI YI+EL RT +L+ K +
Sbjct: 270 ERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILVEQKRHGNN 329
Query: 565 QKELASVKKELAGGGKDSHSGPSTSDQD------LKMSNHASKLIDLDIEVKIIGWDAMI 618
++++ + +E A G+ S P DQD ++ S + + ++V+I+ + I
Sbjct: 330 RRKVLKLDQEAAADGESSSMRPVRDDQDNQLHGAIRSSWVQRRSKECHVDVRIVDDEVNI 389
Query: 619 RIQSSKKNHPAAKLMQALKELDLEVNHASMSVVND--LMIQQATVKMGSRFYTQEQLKNV 676
++ KK + + L E LE+ H ++ D + + V GS Y K +
Sbjct: 390 KLTEKKKANSLLHAAKVLDEFQLELIHVVGGIIGDHHIFMFNTKVSEGSAVYACAVAKKL 449
Query: 677 LAA 679
L A
Sbjct: 450 LQA 452
Score = 37 (18.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 325 GSASNLSKGIHFELPSSVSLTESVD 349
G+ S+L K I LP + L S D
Sbjct: 199 GTQSHLIKDICHSLPQNYGLFPSED 223
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 174 (66.3 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 46/152 (30%), Positives = 86/152 (56%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
+V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I Y+ EL + ++ E++ +L+
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 566 KE---LASVKKELAGGGKDSHSGPSTSDQDL-----KMSNHASKLIDLDIEV--KIIGW- 614
L + ++ ++H + + D+ K ++++++ IEV + W
Sbjct: 115 SRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWM 174
Query: 615 ---DAMIRIQSSKKNHPAAKLMQALKELDLEV 643
++ I SKK +L + L+ L+L +
Sbjct: 175 GEKTVVVCITCSKKRETMVQLCKVLESLNLNI 206
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/136 (36%), Positives = 76/136 (55%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
H+ AER+RREKL+QRF AL +VP + KMDKAS+LGDAI Y+ +L+ +++ E +
Sbjct: 182 HILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 241
Query: 566 KELAS-VKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSK 624
E A VKK D G S+ D++ + L + IE ++ +++I
Sbjct: 242 VEAAVLVKKSQLSA--DDDDG-SSCDENFDGGEATAGLPE--IEARVSERTVLVKIHC-- 294
Query: 625 KNHPAAKLMQALKELD 640
+N A L+ AL E++
Sbjct: 295 ENRKGA-LITALSEVE 309
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 127 (49.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 501 EEPLNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAISYINELRTKLQSAE 558
++ ++HV ER RR+++N+ LR+++P V + D+AS++G + YI+EL+ LQS E
Sbjct: 99 QQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
Query: 559 SDKEDLQKELASV 571
+ K+ +K A V
Sbjct: 159 AKKQ--RKTYAEV 169
Score = 97 (39.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 26/87 (29%), Positives = 48/87 (55%)
Query: 582 SHSGPS-TSDQDLKMSNHA---SKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALK 637
S S PS +S+ + + N SK D+EVK G + +++ S K K++ AL+
Sbjct: 259 SSSSPSVSSNHESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALE 318
Query: 638 ELDLEVNHASMSVVNDLMIQQATVKMG 664
+L LE+ +++ V++ M+ T+K+G
Sbjct: 319 DLALEILQVNINTVDETMLNSFTIKIG 345
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 178 (67.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 56/184 (30%), Positives = 98/184 (53%)
Query: 503 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKE 562
P ++ AER+RR++LN R LR++VP +SKMD+ S+LGD I Y+ EL ++++ E +
Sbjct: 180 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIG 239
Query: 563 DLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQS 622
+EL +L KDS SG ++ ++ + N ++K D+E + G RI+
Sbjct: 240 VTPEEL-----DLLNTMKDSSSG---NNNEMLVRN-STKF---DVENRGSG---NTRIEI 284
Query: 623 SKKNHPAAKL--MQALKELDLEVNHASMSVVNDLMIQQATVKM-GSR-FYTQEQLKNVLA 678
+P L + AL+ L LE+ +S +D +Q + ++ G R + +++K L
Sbjct: 285 CCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIKQTLF 344
Query: 679 AKVG 682
G
Sbjct: 345 RSAG 348
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 173 (66.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAE 558
L HV AER+RREK+NQRF L AV+P + KMDKA++L DA SYI EL+ KL++ E
Sbjct: 129 LEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALE 183
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 131 (51.2 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
++H+ ER RR ++N LR++ P + + D+AS++G AI +I EL+T LQS E+ K
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 562 EDLQK---ELASVKKELAGGGKDSHSGPS 587
+ Q+ L S A GG PS
Sbjct: 61 KRRQQPQAHLISPASISASGGGSPSPTPS 89
Score = 79 (32.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 576 AGGGKDSHSGPSTSDQDLKMSNHASKLIDL------DIEVKIIGWDAMIRIQSSKKNHPA 629
AG S S S D++ + ++L D+E +I G + ++R S + P
Sbjct: 103 AGSSAGSSSSISPKDENKQQLQLVAELAACCNSPMADVEARISGANVLLRTLSRRA--PP 160
Query: 630 AKLMQALKELDLEVNHASMSVVNDLMIQQATVKMG 664
+++ L+ L LEV H +++ ++D ++ +K+G
Sbjct: 161 VRIIALLESLHLEVLHLNITTMDDTVLYSFVLKIG 195
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 169 (64.5 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 50/181 (27%), Positives = 93/181 (51%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR+++N+ LR+++P+ + D+AS++G AI+Y+ EL LQS E +
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKR 174
Query: 562 ---EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMI 618
D + + S L G D S P S + +S +IEV + A I
Sbjct: 175 TRTHDPKGDKTSTSS-LVGPFTDFFSFPQYSTKSSSDVPESSSS-PAEIEVTVAESHANI 232
Query: 619 RIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM--GSRFYTQEQLKNV 676
+I + KK KL+ +L+ L L + H +++ +++ ++ +V++ GS+ T + +
Sbjct: 233 KIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATA 292
Query: 677 L 677
L
Sbjct: 293 L 293
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 173 (66.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 42/143 (29%), Positives = 69/143 (48%)
Query: 422 EDSNKKKRSPTSRGSTEEGMLSFTSGVILPXXXXXXXXXXXXXXXXXXLEASVVKDPDSS 481
+D +KK+++ G+ G LS G + ++ + + S
Sbjct: 255 DDDDKKRKAAAGAGA---GALS-ADGADMVLDDGDDDGLSIDASGGLNYDSEDARGGEDS 310
Query: 482 XXXXXXXXXXXXXXXANGREE--PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL 539
G+++ P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+
Sbjct: 311 GAKKESNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI 370
Query: 540 LGDAISYINELRTKLQSAESDKE 562
LGDAI Y+ EL K+ +++ E
Sbjct: 371 LGDAIEYLKELLQKINDLQNELE 393
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 121 (47.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR ++N+ LR+++P V + D+AS++G AI ++ EL +LQS E+ K
Sbjct: 90 MTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSLEAQK 149
Query: 562 EDL 564
L
Sbjct: 150 RTL 152
Score = 91 (37.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 582 SHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDL 641
S S P+T L+ S H S L D IEV ++ A +R+ S ++ K++ L+ L L
Sbjct: 239 SSSSPATVAAALQ-SEHRSGLAD--IEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRL 295
Query: 642 EVNHASMSVVNDLMIQQATVKM 663
V H +++ ++ L++ +VK+
Sbjct: 296 TVLHLNVTTLDSLVLYTLSVKV 317
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 166 (63.5 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 503 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKE 562
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 28/63 (44%), Positives = 46/63 (73%)
Query: 502 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDK 561
+P ++ AER+RR++LN R LR++VP ++KMD+ S+LGDAI Y+ EL K+ + D+
Sbjct: 148 QPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDE 207
Query: 562 EDL 564
++L
Sbjct: 208 QEL 210
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 159 (61.0 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 47/186 (25%), Positives = 93/186 (50%)
Query: 497 ANGREEPL---NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTK 553
++G P+ HV AER+RREKL+++F AL A++P + K DK ++L DAIS + +L+ +
Sbjct: 108 SHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQ 167
Query: 554 LQSAESDKEDLQK--ELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKI 611
L++ + +KE ++ + VKK ++ + S S ++ +IE KI
Sbjct: 168 LRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVH-IEFDQALP-----EIEAKI 221
Query: 612 IGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQE 671
D +IRI K ++ ++ L + ++ + D + + + ++
Sbjct: 222 SQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMS 281
Query: 672 QLKNVL 677
LK+++
Sbjct: 282 ILKDLV 287
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 45/157 (28%), Positives = 76/157 (48%)
Query: 497 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS 556
AN +E HV AER+RREKL Q+F AL +VP + K DK SLLG I Y+ +L K+++
Sbjct: 283 ANAQE----HVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKA 338
Query: 557 AESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDA 616
E + + + + D G ++S D S+ +S + E I G
Sbjct: 339 LEEGSRRTAEPTTAFESKCRITVDDDDGGSASSGTDDGSSSSSSPTV----EASIHGNTV 394
Query: 617 MIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVND 653
+++I ++ ++ L++ L + + S+ D
Sbjct: 395 LLKICCKERRGLLVMILSELEKQGLSIINTSVVPFTD 431
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 113 (44.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 506 HVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAISYINELRTKLQSAESDKE 562
H+ ER RR+++N+ LR+++P V + D+AS++G + YI EL+ L S E+ K+
Sbjct: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQ 197
Score = 94 (38.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 606 DIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGS 665
D++V+ G + +++ S + A K++ AL+ LE+ HA +S V+D + TVK+G
Sbjct: 319 DVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVNSFTVKIGI 378
Query: 666 RF-YTQEQLKNVL 677
+ E+L V+
Sbjct: 379 ECELSAEELVQVI 391
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 40/100 (40%), Positives = 54/100 (54%)
Query: 510 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELA 569
ER RR KLN++ YALR+VVPN++KMDKAS++ DAI YI L+ + Q + L+ A
Sbjct: 98 ERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVAALESAAA 157
Query: 570 S-----VKKELAGGGKDS-----HSGPSTSDQDLKMSNHA 599
+ AG G D H PS+S + K A
Sbjct: 158 ASAAPAAANPFAGLGADEEHEYGHHHPSSSSERTKKVKRA 197
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 159 (61.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 39/95 (41%), Positives = 53/95 (55%)
Query: 501 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESD 560
+ L H+ +ER+RREKLN F AL+AV+P SK DKAS+L A +I L +KL E
Sbjct: 180 DNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEEK 239
Query: 561 KEDLQKELAS--VKKELAGGGKDSHSGPSTSDQDL 593
+L+ LAS K G + +G T +DL
Sbjct: 240 NRELEARLASRPAAKNDKGETAAAEAGDETKREDL 274
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 117 (46.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 476 KDPDSSXXXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVP--NVSK 533
K SS +G + ++H+ ER RR+++N+ LR+++P V +
Sbjct: 105 KQKGSSSSSSSPAALAAAVGDGDGAAK-MSHITVERNRRKQMNEHLAVLRSLMPCFYVKR 163
Query: 534 MDKASLLGDAISYINELRTKLQSAESDK 561
D+AS++G + YI EL+ L+S E+ K
Sbjct: 164 GDQASIIGGVVDYIKELQQVLRSLEAKK 191
Score = 88 (36.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 606 DIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMG 664
D+ V+ G + +++ S + A K++ AL+ L LE+ H S+ V+D + T+K+G
Sbjct: 338 DVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKIG 396
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 46/179 (25%), Positives = 91/179 (50%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR+++N+ LR+++P + D+AS++G AI+Y+ EL LQS E
Sbjct: 125 MTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPV 184
Query: 562 EDLQKELASVKKELAGGGKDSHSGPSTSDQDL-KMSNHASKLIDLD----IEVKIIGWDA 616
+ ++ + + S SGP + + SN + + IEV ++ A
Sbjct: 185 KTATEDTGAGHDQTKTTSASS-SGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHA 243
Query: 617 MIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM--GSRFYTQEQL 673
++I + K+ KL+ +++ L L + H +++ +D ++ +VK+ GS+ T E +
Sbjct: 244 SLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDI 302
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 125 (49.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 498 NGREEPLNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQ 555
+ + + H+ ER RR ++N+ LR+++P V + D+AS++G AI ++ EL LQ
Sbjct: 89 DAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQLLQ 148
Query: 556 SAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLID 604
S E+ K L + ++ D+ S +DQ+ + A+ D
Sbjct: 149 SLEAQKRTLLMQPPPPPQQQREPKCDAADSTSAADQETPAAAAAAAAAD 197
Score = 74 (31.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 606 DIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVK 662
DIEV ++ A IR+ ++++ K++ L+ L L V H +++ + L + +VK
Sbjct: 236 DIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALYSISVK 292
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 154 (59.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 43/163 (26%), Positives = 83/163 (50%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR ++N +LR+++P+ + + D+AS++G AI ++ L +LQS E+ K
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252
Query: 562 EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQ 621
Q + K+++ + +S + S L+ SN + L IE +I ++IQ
Sbjct: 253 RSQQSD--DNKEQIP----EDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNLKIQ 306
Query: 622 SSKKNHPAAKLMQALKELDLEVNHASM-SVVNDLMIQQATVKM 663
++K + + L++L V H ++ S N + +KM
Sbjct: 307 CTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKM 349
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/185 (25%), Positives = 94/185 (50%)
Query: 503 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKE 562
P ++ AER+RR++LN R LR+VVP +SKMD+ S+LGD I Y+ EL ++++ + +
Sbjct: 194 PSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAA 253
Query: 563 DLQKELASVKKELAGGGKDSHSGP--STSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRI 620
+S + L+ ++ P S+S ++ + ++++ ++E + G I +
Sbjct: 254 TGDSSSSSTEN-LSMLKLNTLKPPPSSSSGEETPLIRNSTRF---EVERRENG-STRIEM 308
Query: 621 QSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGS-RFYTQ--EQLKNVL 677
+ + AL+ L +E+ +S +D +Q + ++ R T+ E++K L
Sbjct: 309 ACAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDTEEIKQTL 368
Query: 678 AAKVG 682
G
Sbjct: 369 FRSAG 373
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/148 (29%), Positives = 77/148 (52%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+NH+ ER RR ++N+ +LRA++P + + D+AS++G AI+Y+ L +QS ES K
Sbjct: 178 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 237
Query: 562 EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQ 621
Q+ E+ + SG S++D + + I IE +I +++Q
Sbjct: 238 RTQQQS----NSEVVENALNHLSGISSNDLWTTLEDQTC--IP-KIEATVIQNHVSLKVQ 290
Query: 622 SSKKNHPAAKLMQALKELDLEVNHASMS 649
KK K + +L++L L V H +++
Sbjct: 291 CEKKQGQLLKGIISLEKLKLTVLHLNIT 318
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 148 (57.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKED 563
L H+ +ER+RREKLN F AL+AV+P SK DK S+L A Y+ L +KL E +
Sbjct: 253 LQHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNRE 312
Query: 564 LQKELASVKKELAGGGK-DSHSGPSTSDQD 592
L+ LAS A K ++ + P+ D
Sbjct: 313 LEARLASRPAAAAKNDKGETAAAPAPEAGD 342
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 139 (54.0 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 30/92 (32%), Positives = 54/92 (58%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL 564
+H EAER+RRE++N LR +VP+ S+MDKA+LLG+ + Y+ +LR++ + +
Sbjct: 31 SHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSEAAGSAAVVPGE 90
Query: 565 QKELASVKKELAGGGKDSHSGPSTSDQDLKMS 596
E+ ++E+ G +G + + +K S
Sbjct: 91 GDEVVVEEEEVEVEGCSCDAGERQAARRVKAS 122
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 143 (55.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 43/168 (25%), Positives = 80/168 (47%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR ++N+ +LR+++P + + D+AS++G AI +I EL LQS E++K
Sbjct: 115 MTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEK 174
Query: 562 E----DLQKELASVKKE--LAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWD 615
D + AS LA S +TS+ + +E +I
Sbjct: 175 RKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTE--VEATVIQNH 232
Query: 616 AMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM 663
++++ + K + +++EL L + H ++S D +I +KM
Sbjct: 233 VSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKM 280
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSA 557
+H EAER+RR+++N LR +VP+ S+MDKA+LLG+ + ++ ELR + A
Sbjct: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADDA 74
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 144 (55.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKED 563
L H+ +ER+RREKLN F+ LR+++P SK DK ++L +A Y+ L T++ E
Sbjct: 265 LYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEITELEGTNTK 324
Query: 564 LQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQ 621
L+K +A GG D+ + Q K+ SK D + +++ M+ ++
Sbjct: 325 LEKHIAG-----GGGAADAAMRARRAQQRAKVQ--ISKAADSQSQ-QLVSLTVMVMVE 374
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 127 AEQEHRKKVLRELNSLISGSTSSP 150
A +H ++R + ++IS +++SP
Sbjct: 157 AVDDHEDAIMRAMMAVISSASASP 180
Score = 38 (18.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 15 DDNGSVMEAFMSSDLTGIWPPSQSSASTADP 45
D ++M A M+ + PS S S + P
Sbjct: 160 DHEDAIMRAMMAVISSASASPSSSGGSASSP 190
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 131 (51.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/175 (24%), Positives = 86/175 (49%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAISYINELRTKLQSAESDK 561
++H+ ER RR ++N+ +LR++ P + + D+AS++G I +I EL+ +Q ES K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 562 EDLQKELASVKK-----ELAGGGKDSHSGPSTSDQDLKMSNHASKLIDL-------DIEV 609
S E + G + P + +++ M+ K + ++E
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENV-MTTSTFKEVGACCNSPHANVEA 119
Query: 610 KIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMG 664
KI G + ++R+ S + K++ L++L +V H ++S + + ++ VK+G
Sbjct: 120 KISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIG 174
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
++ ER RR++LN++ +ALRAVVP ++KMDKAS++ DAI++I +L+ + + + LQ
Sbjct: 98 NIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISVLQ 157
Query: 566 KELA 569
A
Sbjct: 158 SAAA 161
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 497 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKL 554
A G+E ++EAER+RR +LN +ALRAVVP ++KM K + L DAI +I L+ ++
Sbjct: 57 AMGKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEV 114
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 134 (52.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 36/103 (34%), Positives = 59/103 (57%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
H AER RRE++ +R +L+ +VPN +K DKAS+L + I Y+ L+ +++ +
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 200
Query: 566 KELASVKKELAGGGKDSHSGPSTSDQDLKMSNH-ASKLIDLDI 607
+S E AGG SH S+S + KM+ H +KL++ D+
Sbjct: 201 ASASSQISEDAGG---SHENTSSSGE-AKMTEHQVAKLMEEDM 239
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 39/119 (32%), Positives = 64/119 (53%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS-AESD--- 560
+H EAER+RRE++N LR+++PN +K DKASLL + I ++ EL+ + +E++
Sbjct: 177 SHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVP 236
Query: 561 KEDLQKELASVKKELAGGG----KDSHSGPSTSD--QDLKMSNHASKLIDLDIEVKIIG 613
E + +A ++E G G K S SD D+ + A +L L E+ +G
Sbjct: 237 TESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVG 295
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/146 (26%), Positives = 64/146 (43%)
Query: 479 DSSXXXXXXXXXXXXXXXANGREEPL-----NHVEAERQRREKLNQRFYALRAVVPNVSK 533
D+S GREE +H EAER+RRE++N LR +VP K
Sbjct: 50 DASAAAAVAAMEMAKRNCGGGREEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDK 109
Query: 534 MDKASLLGDAISYINELRTKLQSA--ESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQ 591
MDKA+LL + + ++ +L++ + E+A + GGG + GP
Sbjct: 110 MDKAALLAEVVGHVKKLKSAAARVGRRATVPSGADEVAVDEASATGGGGE---GPLLLRA 166
Query: 592 DLKMSNHASKLIDLDIEVKIIGWDAM 617
L + A +D+ ++ +G + +
Sbjct: 167 TLSCDDRADLFVDVKRALQPLGLEVV 192
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 113 (44.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR+++N+ LR+++P + D+AS++G AI+++ EL LQS E+ K
Sbjct: 134 MTHIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINFVKELEQLLQSLEARK 193
Query: 562 EDLQ 565
Q
Sbjct: 194 SSRQ 197
Score = 64 (27.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/96 (23%), Positives = 48/96 (50%)
Query: 568 LASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNH 627
+A V EL G +D G T++ + S ++ D+EV ++ A +R+ S ++
Sbjct: 230 VAPVVNELHG--RDD-GGAGTAEAEASGSKPSAVA---DVEVTMVESHANLRVLSRRRPR 283
Query: 628 PAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM 663
+L+ AL+ L V H +M+ +++ ++K+
Sbjct: 284 QLLRLVVALQGHRLTVLHLNMTSAGHMVLYSFSLKV 319
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 112 (44.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVP-NVSKM-DKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR ++N+ LR+++P + S+ D+AS++G AI+Y+ EL LQS E K
Sbjct: 111 MTHIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQSLEVQK 170
Score = 61 (26.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/82 (19%), Positives = 43/82 (52%)
Query: 606 DIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM-- 663
DIEV ++ A +++ + ++ KL+ L++L + H +++ V+ +++ ++K+
Sbjct: 239 DIEVTMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNVTTVDAMVLYSFSLKVED 298
Query: 664 GSRFYTQEQLKNVLAAKVGDTQ 685
S+ + E + + +G Q
Sbjct: 299 DSKLGSVEDIATAVHQILGSIQ 320
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 42/140 (30%), Positives = 69/140 (49%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR ++NQ LR+++P K D+AS++G AI +I EL KL S E+ K
Sbjct: 88 MTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQK 147
Query: 562 ED---LQKELASVKKELAGGGKDSHSGPST-------------SDQDLKMSNHASKLIDL 605
L + + S + + G +++ PS+ S ++ S + K
Sbjct: 148 HHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRNGSTSSVKTPME 207
Query: 606 DIEVKIIGWDAMIRIQSSKK 625
D+EV +I A IRI S ++
Sbjct: 208 DLEVTLIETHANIRILSRRR 227
>TAIR|locus:2157538 [details] [associations]
symbol:ILR3 "AT5G54680" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB022214
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000238732 UniGene:At.49177
UniGene:At.9639 EMBL:AF488629 EMBL:AY054585 EMBL:BT002189
EMBL:AY086197 IPI:IPI00530460 RefSeq:NP_200279.1
ProteinModelPortal:Q9FH37 SMR:Q9FH37 IntAct:Q9FH37 STRING:Q9FH37
EnsemblPlants:AT5G54680.1 GeneID:835557 KEGG:ath:AT5G54680
TAIR:At5g54680 eggNOG:NOG277469 InParanoid:Q9FH37 OMA:MASPEGT
PhylomeDB:Q9FH37 ProtClustDB:CLSN2916456 Genevestigator:Q9FH37
Uniprot:Q9FH37
Length = 234
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 510 ERQRREKLNQRFYALRAVV-P-NVSKMDKASLLGDAISYINELR---TKLQSAESDKEDL 564
E+QRR++LN +F L A++ P N K DKA++L DA+ + +LR KL+ + S +D
Sbjct: 80 EKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDK 139
Query: 565 QKELASVKKELAGGGKDSHSGPSTSDQDLKMSN 597
KEL + K EL + + +Q LK N
Sbjct: 140 IKELKTEKNELRDEKQRLKTEKEKLEQQLKAMN 172
>UNIPROTKB|Q5JNS0 [details] [associations]
symbol:P0706B05.43 "Os01g0293100 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002482 RefSeq:NP_001042795.1 UniGene:Os.54828 GeneID:4325164
KEGG:osa:4325164 HOGENOM:HOG000071096 OMA:HPQCELL
ProtClustDB:CLSN2691354 Uniprot:Q5JNS0
Length = 379
Score = 114 (45.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 503 PLNHVEA-ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINEL-RT 552
P N VE E+QRR +L +++ AL ++PN +K D+A+++ DAI YI EL RT
Sbjct: 174 PANGVEKKEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRT 225
Score = 59 (25.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 607 IEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGS 665
++V+I+ D I++ +++ A +AL +L L++ H S + D I K+ S
Sbjct: 301 VDVRIVEDDVNIKLTKRRRDGCLAAASRALDDLRLDLVHLSGGKIGDCHIYMFNTKIHS 359
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 38/167 (22%), Positives = 83/167 (49%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVP-NVSKM-DKASLLGDAISYINELRTKLQSAESD- 560
+NH+ ER RR+++N L++++P + S+ D+AS++ ISY+ +L +LQS E+
Sbjct: 102 MNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEAQL 161
Query: 561 KEDLQKELASVKKELAGGGKDSHS---GPSTSDQDLKMSNHASKL-IDLDIEVKIIGWDA 616
K + ++ + + S + +T+ +H +L + D+EV ++ A
Sbjct: 162 KATKLNQSPNIFSDFFMFPQYSTATATATATASSSSSSHHHHKRLEVVADVEVTMVERHA 221
Query: 617 MIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM 663
I++ + + K++ L L H +++ D+ + +VK+
Sbjct: 222 NIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKV 268
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 126 (49.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 22/50 (44%), Positives = 39/50 (78%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +E++RR ++N++ AL++++PN SK DKAS+L DAI Y+ +L+ ++Q
Sbjct: 37 HNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQ 86
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 127 (49.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 551
+H EAER+RRE++N LR+++PN +K DKASLL + I ++ EL+
Sbjct: 135 SHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELK 181
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 128 (50.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKL 554
H ++ER+RR+K+NQR L+ +VPN SK DKAS+L + I Y+ +L+ ++
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 118 (46.6 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +ER+RR+++N++ AL+ ++PN +K DK S+L +AI Y+ L+ +LQ
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQ 67
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 121 (47.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 21/51 (41%), Positives = 39/51 (76%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS 556
H +E++RR K+N++ AL+ ++PN +K DKAS+L +AI Y+ +L+ ++Q+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQT 148
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 126 (49.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESD 560
+H EAER+RR+++N LR+++PN +K DKASLL + I ++ EL+ + + D
Sbjct: 124 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAMMED 179
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 531 VSKMDKASLLGDAISYINELRTKLQSAESDKE---------DLQKELASVKKELAGGGKD 581
V + D+AS++G AI ++ EL LQ ES K D+ S +
Sbjct: 226 VQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQ 285
Query: 582 SH----SGPSTSDQD---LKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQ 634
+ +G T + L+ +K D+EVK++G+DAMI+I S ++ K +
Sbjct: 286 AQPLIITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIA 345
Query: 635 ALKELDLEVNHASMSVVNDLMIQQATVKMGSRF-YTQEQL 673
AL++L L + H +++ + ++ VK+ S +T E +
Sbjct: 346 ALEDLHLSILHTNITTMEQTVLYSFNVKITSETRFTAEDI 385
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR+++N+ LR+++P V + D+AS++G AI ++ EL LQ ES K
Sbjct: 197 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 256
Query: 562 EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLI 603
++ L +++ S S P T+ ++N A LI
Sbjct: 257 R--RRILGETGRDMTTTTTSS-SSPITT-----VANQAQPLI 290
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 44/171 (25%), Positives = 85/171 (49%)
Query: 510 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELA 569
ER+RR RF L+ ++PN +K D+AS++G+AI YI EL L++ + K ++K+
Sbjct: 221 ERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKEL---LRTIDEFKLLVEKKRV 277
Query: 570 SVKKELAGGGKDSHSGPSTS--DQDL-KMSNHASKLIDL-------DIEVKIIGWDAMIR 619
+ D + + +Q L N+A + L D++V+II + I+
Sbjct: 278 KQRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDEVTIK 337
Query: 620 IQSSKKNHPAAKLMQALKELDLEVNHASMSVVND--LMIQQATVKMGSRFY 668
I KK + + + + +L+L+++H + + + + + A + GS Y
Sbjct: 338 IVQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKISEGSSVY 388
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAE--SDKED 563
H EAER+RRE++N LR ++P+ +MDKA+LL ++ + L+T+ A S
Sbjct: 70 HSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHLKTRATEATTPSTAAT 129
Query: 564 LQKELASVKKELAGGGK 580
+ E V + GG+
Sbjct: 130 IPPEANEVTVQCYAGGE 146
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 510 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 551
ER+RR N RF+ L+ ++PN +K +AS++ D I YINEL+
Sbjct: 28 ERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQ 69
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 23/50 (46%), Positives = 38/50 (76%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +ER+RR+++N+R AL+ ++P+ SK DKAS+L +AI Y+ L+ +LQ
Sbjct: 262 HNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQ 311
>UNIPROTKB|G3V2R5 [details] [associations]
symbol:MAX "Protein max" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL139022 HGNC:HGNC:6913
ChiTaRS:MAX ProteinModelPortal:G3V2R5 SMR:G3V2R5
Ensembl:ENST00000556443 ArrayExpress:G3V2R5 Bgee:G3V2R5
Uniprot:G3V2R5
Length = 125
Score = 102 (41.0 bits), Expect = 0.00015, P = 0.00015
Identities = 22/72 (30%), Positives = 43/72 (59%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVS--KMDKASLLGDAISYINELRTKLQSAESDKE 562
+H ER+RR+ + F++LR VP++ K +A +L A YI +R K + + D +
Sbjct: 18 HHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDID 77
Query: 563 DLQKELASVKKE 574
DL+++ A ++++
Sbjct: 78 DLKRQNALLEQQ 89
>UNIPROTKB|G3V563 [details] [associations]
symbol:MAX "Protein max" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL139022 HGNC:HGNC:6913
ChiTaRS:MAX ProteinModelPortal:G3V563 SMR:G3V563
Ensembl:ENST00000557746 ArrayExpress:G3V563 Bgee:G3V563
Uniprot:G3V563
Length = 121
Score = 102 (41.0 bits), Expect = 0.00015, P = 0.00015
Identities = 22/72 (30%), Positives = 43/72 (59%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVS--KMDKASLLGDAISYINELRTKLQSAESDKE 562
+H ER+RR+ + F++LR VP++ K +A +L A YI +R K + + D +
Sbjct: 18 HHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDID 77
Query: 563 DLQKELASVKKE 574
DL+++ A ++++
Sbjct: 78 DLKRQNALLEQQ 89
>UNIPROTKB|Q6V3B1 [details] [associations]
symbol:MAX "MAX protein" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P61244 EMBL:AL139022
HOVERGEN:HBG008542 UniGene:Hs.285354 HGNC:HGNC:6913 ChiTaRS:MAX
EMBL:AY353088 EMBL:CR542191 IPI:IPI01024945 SMR:Q6V3B1
STRING:Q6V3B1 Ensembl:ENST00000555667 UCSC:uc001xii.1
Uniprot:Q6V3B1
Length = 94
Score = 102 (41.0 bits), Expect = 0.00015, P = 0.00015
Identities = 22/72 (30%), Positives = 43/72 (59%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVS--KMDKASLLGDAISYINELRTKLQSAESDKE 562
+H ER+RR+ + F++LR VP++ K +A +L A YI +R K + + D +
Sbjct: 18 HHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDID 77
Query: 563 DLQKELASVKKE 574
DL+++ A ++++
Sbjct: 78 DLKRQNALLEQQ 89
>TAIR|locus:2063203 [details] [associations]
symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
Length = 253
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTK-LQSAESDKED 563
NH EAER+RRE++N LR V+ SK DKA+LL + + EL+ + L++++SD+
Sbjct: 70 NHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLETSDSDQTL 129
Query: 564 LQKE 567
L E
Sbjct: 130 LPSE 133
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 21/50 (42%), Positives = 39/50 (78%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +E++RR K+N++ AL++++PN +K DKAS+L +AI Y+ +L+ ++Q
Sbjct: 108 HNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 157
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDK-ED 563
+H AE++RR+++N ALR +VPN K+DKA+LL I + EL+ K +AES +D
Sbjct: 66 SHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK--AAESPIFQD 123
Query: 564 LQKELASV 571
L E V
Sbjct: 124 LPTEADEV 131
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 551
+H EAER+RR+++N LR+++PN +K DKASLL + I ++ EL+
Sbjct: 109 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELK 155
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 115 (45.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR+++N+ LR+++P V + D+AS++G AI+Y+ E+ LQS E+ +
Sbjct: 140 MTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVKEMEQLLQSLEAHR 199
Score = 51 (23.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 14/74 (18%), Positives = 35/74 (47%)
Query: 590 DQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMS 649
D D +S + DIEV ++ A +++ S ++ +++ L+ L V H +++
Sbjct: 255 DADADVSGSKPSSV-ADIEVTMVESHANLKVLSRRRPRQLLRMVAGLQHHRLAVLHLNVA 313
Query: 650 VVNDLMIQQATVKM 663
+ + ++K+
Sbjct: 314 SAGHMALYSLSLKV 327
>UNIPROTKB|Q6YW41 [details] [associations]
symbol:B1131G07.17 "Basic helix-loop-helix (BHLH) family
protein-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP005797 ProteinModelPortal:Q6YW41
Gramene:Q6YW41 HOGENOM:HOG000083084 Uniprot:Q6YW41
Length = 745
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKED 563
L+H+ +ER+RRE+LN+ F LR ++P SK DKA++L + Y+N L ++ E+
Sbjct: 513 LHHMISERRRRERLNESFEHLRGLLPPGSKKDKATVLAKTLEYMNLLIAQISELEAKNRA 572
Query: 564 LQKELASVKKELAGGGKDSHS 584
LQ ++ + A G S S
Sbjct: 573 LQTQI----HQRANGSSSSRS 589
>TAIR|locus:2129710 [details] [associations]
symbol:bHLH104 "AT4G14410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161538 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:Z97336 HOGENOM:HOG000238732
ProtClustDB:CLSN2689429 EMBL:AF488628 EMBL:AY102106 EMBL:AY133565
EMBL:AY088053 IPI:IPI00527516 IPI:IPI00532570 PIR:B71406
RefSeq:NP_567431.1 RefSeq:NP_849383.1 UniGene:At.4272
ProteinModelPortal:Q8L467 SMR:Q8L467 EnsemblPlants:AT4G14410.1
GeneID:827086 KEGG:ath:AT4G14410 TAIR:At4g14410 eggNOG:NOG307178
InParanoid:Q8L467 OMA:TKACRER PhylomeDB:Q8L467
Genevestigator:Q8L467 Uniprot:Q8L467
Length = 283
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 510 ERQRREKLNQRFYALRAVV-PN-VSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKE 567
ER RREKLN+RF L +V+ P K DK ++L DAI +N+LR + E + L +E
Sbjct: 139 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEE 198
Query: 568 LASVKKE 574
+ S+K E
Sbjct: 199 IKSLKAE 205
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 499 GREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
GR + H E+ER+RR+++NQR L+ ++P SK DK S+L D I ++ +L+ ++Q
Sbjct: 165 GRAAAI-HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQ 220
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 510 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKL 554
ER+RR LN+R+ AL+ ++P+ SK D+AS+L D I YINELR ++
Sbjct: 219 ERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRV 263
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 108 (43.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVS-KMDKASLLGDAISYINELRTKLQSAE 558
H E++RR K+N+RF LR ++PN K D AS L + I Y+ L+ K+Q E
Sbjct: 50 HSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYE 103
Score = 55 (24.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 579 GKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKE 638
G+ ++ P+TSD L SN DL IE I I S+ + + L QAL+
Sbjct: 205 GEQANECPATSD-GLGQSN------DLVIE------GGTISISSAYSHELLSSLTQALQN 251
Query: 639 LDLEVNHASMSVVNDL 654
++++ A +SV DL
Sbjct: 252 AGIDLSQAKLSVQIDL 267
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 124 (48.7 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 510 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELA 569
ER+RR N RF+ L+ ++PN +K+D+AS++G+AI YI EL L++ E K ++K+
Sbjct: 252 ERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL---LRTIEEFKMLVEKKRC 308
Query: 570 S---VKKEL----AGGGKDSHSGPST 588
KK GGG+D T
Sbjct: 309 GRFRSKKRARVGEGGGGEDQEEEEDT 334
Score = 41 (19.5 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 366 LNFSEYAYDHNSVKNGSSRL 385
LNF D N ++NGS L
Sbjct: 177 LNFPMQPRDQNQLRNGSCLL 196
Score = 40 (19.1 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 262 EIGTWPSAMQNPDQGENDPSSW-INDPSPTPAP 293
E+ + + Q+ Q + P + IN P P P P
Sbjct: 58 ELSEFHLSPQDCPQASSTPLQFHINPPPPPPPP 90
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 509 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKL---QSAESDKED-L 564
A R+RR +++ RF LR++VP SKMD S+L AI Y+ L+T++ Q+A E+
Sbjct: 60 AARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQISLHQAALMQHEEGC 119
Query: 565 QKELASVKKELAGGGKD----SHSGPSTSDQDLKMSNHASKLIDLDIE 608
ELA+ G + SH D+ +++ A + + ++
Sbjct: 120 HAELAAYSAVAVVGDNEVTLASHGRTGACDEMMQLQVAAEEALSYGVD 167
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +ER+RR+++N+R AL+ ++P+ S+ DKAS+L +AI Y+ L+ +LQ
Sbjct: 261 HNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQ 310
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 509 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAE 558
A R RRE++++R L+ +VP +KMD AS+L +AI Y+ L+T++QS E
Sbjct: 165 AARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
>TAIR|locus:2146663 [details] [associations]
symbol:BHLH101 "AT5G04150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010106 "cellular response to iron ion starvation"
evidence=IEP] [GO:0055072 "iron ion homeostasis" evidence=IGI]
InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0055072
HOGENOM:HOG000238662 EMBL:AJ519810 EMBL:AL391716 EMBL:DQ446915
EMBL:DQ653262 IPI:IPI00544479 RefSeq:NP_196035.1 UniGene:At.33170
ProteinModelPortal:Q9FYE6 SMR:Q9FYE6 PaxDb:Q9FYE6 PRIDE:Q9FYE6
EnsemblPlants:AT5G04150.1 GeneID:830293 KEGG:ath:AT5G04150
TAIR:At5g04150 eggNOG:NOG286867 InParanoid:Q9FYE6 OMA:QRIAANW
PhylomeDB:Q9FYE6 ProtClustDB:CLSN2914826 Genevestigator:Q9FYE6
Uniprot:Q9FYE6
Length = 240
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 501 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL---LGDAISYINELRTKLQSA 557
E+ LNH +ER RR KLN + +LRA++P + K S+ + + YI E + +LQ
Sbjct: 65 EKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQRL 124
Query: 558 ESDKEDLQKELA-SVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIG--W 614
KE+L K ++ +E S S+S Q + A+ L D +I V+I W
Sbjct: 125 SRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIA----ANWLTDTEIAVQIATSKW 180
Query: 615 ----DAMIRIQSSKKN 626
D ++R++ + N
Sbjct: 181 TSVSDMLLRLEENGLN 196
>TAIR|locus:2040287 [details] [associations]
symbol:BHLH100 "basic helix-loop-helix protein 100"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010106 "cellular response to iron
ion starvation" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0055072 "iron ion homeostasis"
evidence=IGI] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005662 GO:GO:0055072 HSSP:P61244 EMBL:AY074635 EMBL:AF488626
IPI:IPI00522524 IPI:IPI00548751 PIR:E84839 RefSeq:NP_181657.1
RefSeq:NP_850349.1 UniGene:At.37027 ProteinModelPortal:Q9ZVB5
SMR:Q9ZVB5 EnsemblPlants:AT2G41240.1 GeneID:818723
KEGG:ath:AT2G41240 TAIR:At2g41240 eggNOG:NOG256140
HOGENOM:HOG000238662 InParanoid:Q9ZVB5 OMA:HNASERE PhylomeDB:Q9ZVB5
ProtClustDB:CLSN2683761 Genevestigator:Q9ZVB5 Uniprot:Q9ZVB5
Length = 242
Score = 115 (45.5 bits), Expect = 0.00053, P = 0.00053
Identities = 30/111 (27%), Positives = 64/111 (57%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL---LGDAISYINELRTKLQSAESD 560
LNH +ER+RR+K+N F +LR+ +P ++ K S+ + A+ YI EL+ +++
Sbjct: 64 LNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMKK 123
Query: 561 KEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKI 611
KE+L +++ +++L ++S S + +S+ ++L + ++ V+I
Sbjct: 124 KEELSFQISG-QRDLVYTDQNSKSEEGVTSYASTVSS--TRLSETEVMVQI 171
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
H EAER+RRE++N LR ++P+ +MDKA+LL + + +L+ K S + + L
Sbjct: 69 HSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLKRKA-SEITQRTPLP 127
Query: 566 KELASVKKELAGG 578
E V E G
Sbjct: 128 PETNEVSIECFTG 140
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKED 563
L H+ +ER+RREKLN+ F ALR+++P +K DKAS+L A ++ L+ ++ +
Sbjct: 288 LQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNRE 347
Query: 564 LQKELASVKK 573
++ +LA ++
Sbjct: 348 VEAKLAGERE 357
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
H AER RRE++ +R AL+ +VPN +K DKAS+L + I Y+ L+ +++ +
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 208
Query: 566 KELASVKKELAGGGKDSHS----GPST---SDQDLKMSNH-ASKLIDLDI 607
++S E G ++ S G T S+ + M+ H +KL++ D+
Sbjct: 209 ASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDM 258
>UNIPROTKB|Q6YYG5 [details] [associations]
symbol:OSJNBa0051E21.28 "Putative uncharacterized protein
OSJNBa0051E21.28" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP005611 ProteinModelPortal:Q6YYG5
KEGG:dosa:Os02t0548100-00 Gramene:Q6YYG5 Uniprot:Q6YYG5
Length = 365
Score = 117 (46.2 bits), Expect = 0.00077, P = 0.00077
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 510 ERQRREKLNQRFYALRAVVPNV-SKMDKASLLGDAISYINELRTKLQSAESDKEDLQKEL 568
ER+RR ++N F +R +VPN+ K + ++ AI+YI L+ + E+ K++LQ+E
Sbjct: 96 ERERRRRMNDMFAGIRRLVPNLPEKSSRVEIIDGAIAYIKMLQGEEVRMEAQKQELQRER 155
Query: 569 ASVKKELAG--GGKDSHSGPSTS 589
+ E+A GG + S S++
Sbjct: 156 DRLAMEVAAAAGGAGASSSSSSA 178
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 117 (46.2 bits), Expect = 0.00096, P = 0.00096
Identities = 21/50 (42%), Positives = 38/50 (76%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +ER+RR+++N++ AL+ +VP+ +K DKAS+L +AI Y+ L+ ++Q
Sbjct: 233 HNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 282
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 685 580 0.00081 120 3 11 23 0.46 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 105
No. of states in DFA: 623 (66 KB)
Total size of DFA: 304 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.31u 0.09s 51.40t Elapsed: 00:00:02
Total cpu time: 51.32u 0.09s 51.41t Elapsed: 00:00:02
Start: Thu May 9 17:19:49 2013 End: Thu May 9 17:19:51 2013
WARNINGS ISSUED: 1