BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005651
(685 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/699 (55%), Positives = 468/699 (66%), Gaps = 93/699 (13%)
Query: 1 MTDYRLPSTMNLWT-DDNGSVMEAFMSS-DLTGIWPPSQSSASTADPMKTHISSSSQQQQ 58
MTDYRL TMNLWT DDN S+MEAFMSS D++ +W +++T T + + +
Sbjct: 1 MTDYRLQPTMNLWTTDDNASMMEAFMSSSDISTLW---PPASTTTTTATTETTPTPAMEI 57
Query: 59 QQQQFFNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSSMLGWGDGYYKGEGEKG-- 116
Q FNQETLQQRLQ LIEG+ EGWTYAIFWQ S D+SG+S+LGWGDGYYKGE +K
Sbjct: 58 PAQAGFNQETLQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANP 117
Query: 117 --KSSKIKTSSAAEQEHRKKVLRELNSLISGSTSSPTDDAVDEEVTDTEWFFLISMTQSF 174
+SS S+ A+QE+RKKVLRELNSLISG + P+DDAVDEEVTDTEWFFL+SMTQSF
Sbjct: 118 RRRSSSPPFSTPADQEYRKKVLRELNSLISGGVA-PSDDAVDEEVTDTEWFFLVSMTQSF 176
Query: 175 YVTGGGGGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVE 234
G GL G+A+ + VWVSG+++L+ SGC+RA+QG VFG+ T+ CIPSANGVVE
Sbjct: 177 AC-----GAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVE 231
Query: 235 LGSTEVIIQNSDLMNKVRFLFNFNGSMEIGTWPSAMQNPDQGENDPSSWINDPSPTPAPT 294
+GSTE I Q+SDL+NKVR LFNF+G + + +PDQGENDPS WINDP TP
Sbjct: 232 VGSTEPIRQSSDLINKVRILFNFDGGAGDLSGLNWNLDPDQGENDPSMWINDPIGTPG-- 289
Query: 295 AGFIEIKDSTAAATTTTTTTTTTTTPAIGS--GSASNLSKGIHFELPSSVSLTESVDLQ- 351
+ P G+ S+ SK I FE SS ++TE+ +L
Sbjct: 290 ----------------------SNEPGNGAPSSSSQLFSKSIQFENGSSSTITENPNLDP 327
Query: 352 -----HQQI--PQTQSFFTRELNFSEYAYDHNSVKNGSSRLFKPESGEILNFA-ESKRSS 403
H Q P+ + F+RELNFS SS L KP SGEILNF E KRSS
Sbjct: 328 TPSPVHSQTQNPKFNNTFSRELNFS----------TSSSTLVKPRSGEILNFGDEGKRSS 377
Query: 404 CTGNGNNSLLSNHSQFVAEDSNKKKRSPTSRGSTEEGMLSFTSGVILPSSGVVKSSGGAG 463
GN + S S +QF NK+KRS E+ +LSF AG
Sbjct: 378 --GNPDPSSYSGQTQF----ENKRKRSMVL---NEDKVLSFGDKT-------------AG 415
Query: 464 DSDHSDLEASVVKDPDSSRVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYA 523
+SDHSDLEASVVK+ V EK+P+KRGRKPANGREEPLNHVEAERQRREKLNQRFYA
Sbjct: 416 ESDHSDLEASVVKE-----VAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYA 470
Query: 524 LRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSH 583
LRAVVPNVSKMDKASLLGDAI+YINEL++K+ ES+K ++ +L VK ELAG +
Sbjct: 471 LRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASAS 530
Query: 584 SGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEV 643
G D+ S + K + ++IEVKIIGWDAMIR++SSK+NHPAA+LM AL +L+LEV
Sbjct: 531 GG------DMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEV 584
Query: 644 NHASMSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKVG 682
NHASMSVVNDLMIQQATVKMG R YTQEQL+ L +K+G
Sbjct: 585 NHASMSVVNDLMIQQATVKMGFRIYTQEQLRASLISKIG 623
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust.
Identities = 355/700 (50%), Positives = 432/700 (61%), Gaps = 135/700 (19%)
Query: 1 MTDYRL----PSTMNLW-TDDNGSVMEAFMSSDLTGIWPPSQSSASTADPMKTHISSSSQ 55
+TDY L T NLW TDD+ SVMEAF+ H S
Sbjct: 8 VTDYHLNQSKTDTTNLWSTDDDASVMEAFIGGG------------------SDHSSLFPP 49
Query: 56 QQQQQQQFFNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSG-------SSMLGWGDGY 108
N++ LQQRLQ LIEG+ E WTYA+FWQSS ++G + +LGWGDGY
Sbjct: 50 LPPPPLPQVNEDNLQQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGY 109
Query: 109 YKGEGEKGKSSKIKTSSAAEQEHRKKVLRELNSLISGSTSSPTDDAVDEEVTDTEWFFLI 168
YKGE EK + K +SAAEQEHRK+V+RELNSLIS D+A DEEVTDTEWFFL+
Sbjct: 110 YKGEEEKSRKKKSNPASAAEQEHRKRVIRELNSLIS-GGVGGGDEAGDEEVTDTEWFFLV 168
Query: 169 SMTQSFYVTGGGGGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPS 228
SMTQSF G GLPGQA+ + +W+SG+ LA S C+RARQGQ++GLQT+VC+ +
Sbjct: 169 SMTQSFV-----KGTGLPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVAT 223
Query: 229 ANGVVELGSTEVIIQNSDLMNKVRFLFNFN-GSMEIGTWPSAMQNPDQGENDPSSWINDP 287
NGVVELGS+E+I Q+SDL++KV FNFN G E G+W + NPDQGE NDP
Sbjct: 224 ENGVVELGSSEIIHQSSDLVDKVDTFFNFNNGGGEFGSWAFNL-NPDQGE-------NDP 275
Query: 288 SPTPAPTAGFIEIKDSTAAATTTTTTTTTTTTPAIGSGSASNLSKGIHFELPSSVSLTES 347
+ G DS A +T S S L G
Sbjct: 276 GLWISEPNGV----DSGLVAAPVMNNGGNDSTSNSDSQPISKLCNG-------------- 317
Query: 348 VDLQHQQIPQTQSFFTRELNFSEYAYDHNSVKNGSSRLFKPESGEILNFAESKRSSCTGN 407
+SV+N + ++ K S E++NF N
Sbjct: 318 ----------------------------SSVENPNPKVLK--SCEMVNFK---------N 338
Query: 408 GNNSLLSNHSQFVAEDSNKKKRSPTSRGSTEEGMLSFTSGVILPSSGVVKSSGGAGDSDH 467
G + N + EDS+ KKRSP S + EEGMLSFTS +LP DS+H
Sbjct: 339 G----IENGQE---EDSSNKKRSPVS--NNEEGMLSFTS--VLPC-----------DSNH 376
Query: 468 SDLEASVVKDPDSSR--VEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALR 525
SDLEASV K+ +S+R VEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY+LR
Sbjct: 377 SDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLR 436
Query: 526 AVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSG 585
AVVPNVSKMDKASLLGDAISYI+EL++KLQ AESDKE+LQK++ + KE AG K
Sbjct: 437 AVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKE-AGNAK----- 490
Query: 586 PSTSDQDLKMSNH-ASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVN 644
+S +D K N +S LI+++++VKIIGWDAMIRIQ SK+NHP AK M+ALKELDLEVN
Sbjct: 491 --SSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVN 548
Query: 645 HASMSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKVGDT 684
HAS+SVVNDLMIQQATVKMG++F+TQ+QLK L KVG+
Sbjct: 549 HASLSVVNDLMIQQATVKMGNQFFTQDQLKVALTEKVGEC 588
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/276 (63%), Positives = 211/276 (76%), Gaps = 21/276 (7%)
Query: 412 LLSNHSQFVAEDSNKKKRSPTSRGST-EEGMLSFTSGVILPSSGVVKSSGGAGDSDHSDL 470
L SN + + + KKR+ S+GS +EGMLSF++ VV+S+ A DSDHSDL
Sbjct: 332 LKSNETLSFCGNESSKKRTSVSKGSNNDEGMLSFST--------VVRSA--ANDSDHSDL 381
Query: 471 EASVVKDPDSSRVEP-EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP 529
EASVVK+ + VEP EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY+LRAVVP
Sbjct: 382 EASVVKE--AIVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVP 439
Query: 530 NVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTS 589
NVSKMDKASLLGDAISYINEL++KLQ AESDKE++QK+L + KE G G +
Sbjct: 440 NVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNG-----KGCGSR 494
Query: 590 DQDLKMSNHASKL--IDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHAS 647
++ K SN S I+++I+VKIIGWD MIR+Q KK+HP A+ M+ALKELDLEVNHAS
Sbjct: 495 AKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHAS 554
Query: 648 MSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKVGD 683
+SVVNDLMIQQATVKMGS+F+ +QLK L KVG+
Sbjct: 555 LSVVNDLMIQQATVKMGSQFFNHDQLKVALMTKVGE 590
Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 168/237 (70%), Gaps = 19/237 (8%)
Query: 64 FNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSS-----MLGWGDGYYKGEGEKGKS 118
FN++TLQQRLQ LIE + E WTYAIFWQ S D+ S+ +LGWGDGYYKGE + K
Sbjct: 47 FNEDTLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGE--EDKE 104
Query: 119 SKIKTSSAAEQEHRKKVLRELNSLISGSTSSPTDDAVDEEVTDTEWFFLISMTQSFYVTG 178
K ++ AEQEHRK+V+RELNSLISG +D++ DEEVTDTEWFFL+SMTQSF
Sbjct: 105 KKKNNTNTAEQEHRKRVIRELNSLISGGIG-VSDESNDEEVTDTEWFFLVSMTQSFV--- 160
Query: 179 GGGGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGST 238
G GLPG+++ + +W+SG+ L SGC+RA QGQ++GL+T+VCI + NGVVELGS+
Sbjct: 161 --NGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSS 218
Query: 239 EVIIQNSDLMNKV-----RFLFNFNGSMEIGTWPSAMQNPDQGENDPSSWINDPSPT 290
EVI Q+SDLM+KV N +E +W + NPDQGENDP+ WI++P+ T
Sbjct: 219 EVISQSSDLMHKVNNLFNFNNGGGNNGVEASSWGFNL-NPDQGENDPALWISEPTNT 274
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 140/187 (74%), Gaps = 11/187 (5%)
Query: 496 PANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
PA+GR++PLNHVEAER RREKLN RFYALRAVVPNVSKMDK SLL DA+ YINEL++K +
Sbjct: 334 PAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAE 393
Query: 556 SAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKII-GW 614
+ E +K ++ + + KE+AG ++ PS K AS++ + IEVKI+
Sbjct: 394 NVELEKHAIEIQFNEL-KEIAG---QRNAIPSVC----KYEEKASEM--MKIEVKIMESD 443
Query: 615 DAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLK 674
DAM+R++S K +HP A+LM AL +L+LEVNHAS+SV+NDLMIQQA VKMG R Y QE+L+
Sbjct: 444 DAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEELR 503
Query: 675 NVLAAKV 681
++L +K+
Sbjct: 504 DLLMSKI 510
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 171/308 (55%), Gaps = 45/308 (14%)
Query: 14 TDDNGSVMEAFMSSDLTGIWPPSQSSASTADPMKTHISSSSQQQQQQQQFFNQETLQQRL 73
TDDN ++EA ++SD + P+ S T TL +RL
Sbjct: 4 TDDNLLMIEALLTSDPSPPLLPANLSLET-------------------------TLPKRL 38
Query: 74 QQLIEGSREGWTYAIFWQSSCD-YSGSSMLGWGDGYYKG---EGEKGKSSKIKT--SSAA 127
++ G+ E W+YAIFW+ S D +SG ++L WGDG Y G E +G+ + KT SS
Sbjct: 39 HAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKTILSSPE 98
Query: 128 EQEHRKKVLRELNSLISGST----SSPTDDAVDEEVTDTEWFFLISMTQSFYVTGGGGGG 183
E+E R V+RELN +ISG D D EVTD EWFFL+SMT SF G G
Sbjct: 99 EKERRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSF-----GNGS 153
Query: 184 GLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQ 243
GL G+A+ +PV V+G++ + SGCDRA+QG GLQT++CIPS NGV+EL STE I
Sbjct: 154 GLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTEEIRP 213
Query: 244 NSDLMNKVRFLFNFNGSMEIGTWPSAMQN--PDQGENDPSSWIN-DPSPTPAPTAGFIEI 300
NSDL N++RFL F GS P++ P Q E+ SS + +P+P+P +
Sbjct: 214 NSDLFNRIRFL--FGGSKYFSGAPNSNSELFPFQLESSCSSTVTGNPNPSPVYLQNRYNL 271
Query: 301 KDSTAAAT 308
ST+++T
Sbjct: 272 NFSTSSST 279
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 124/205 (60%), Gaps = 27/205 (13%)
Query: 483 VEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGD 542
V EK+PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGD
Sbjct: 373 VVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGD 432
Query: 543 AISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKL 602
AISYI EL+ K++ E ++ +D+ L SN +
Sbjct: 433 AISYIKELQEKVKIMEDER-------------------------VGTDKSLSESNTITVE 467
Query: 603 IDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVK 662
+++++ + + ++R+ S +HPA++++QA++ ++ + A +S+ D M +K
Sbjct: 468 ESPEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIK 527
Query: 663 M--GSRFYTQEQLKNVLAAKVGDTQ 685
GS T+E+L + TQ
Sbjct: 528 SNNGSDPLTKEKLIAAFYPETSSTQ 552
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 108/200 (54%), Gaps = 17/200 (8%)
Query: 67 ETLQQRLQQLIE---GSREGWTYAIFWQSSCDYSGSSMLGWGDGYYKGEGEKGKSSKIKT 123
+TL ++L L++ W YAIFWQ + SG +LGWGDG + E+ +S +++
Sbjct: 46 DTLNKKLSSLVDWPNSENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRS 105
Query: 124 SS----AAEQE----HRKKVLRELNSLISGSTSSPTDDAVDEEVTDTEWFFLISMTQSFY 175
+ AE+E RK+VL++L+ L GS ++ E+VT TE FFL SM F+
Sbjct: 106 YNFNNMGAEEETWQDMRKRVLQKLHRLFGGSDEDNYALSL-EKVTATEIFFLASMY--FF 162
Query: 176 VTGGGGGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVEL 235
G GG PG+ Y VW+S A + C R+ + G++T+V +P+ GV+EL
Sbjct: 163 FNHGEGG---PGRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLEL 219
Query: 236 GSTEVIIQNSDLMNKVRFLF 255
GS + +N L+ V+ LF
Sbjct: 220 GSVWSLPENIGLVKSVQALF 239
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 117/191 (61%), Gaps = 31/191 (16%)
Query: 488 KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYI 547
+PRKRGR+PANGR E LNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDA+SYI
Sbjct: 416 RPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYI 475
Query: 548 NELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDI 607
NEL KL+ E+++E L S P S +D DI
Sbjct: 476 NELHAKLKVMEAERERL----------------GYSSNPPIS-------------LDSDI 506
Query: 608 EVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSRF 667
V+ G D +RI ++HPA+++ A +E +EV ++++ V D ++ VK S
Sbjct: 507 NVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVK--SEE 564
Query: 668 YTQEQLKNVLA 678
T+E+L + L+
Sbjct: 565 LTKEKLISALS 575
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 105/197 (53%), Gaps = 14/197 (7%)
Query: 67 ETLQQRLQQLIE---GSREGWTYAIFWQSSCDYSGSSMLGWGDGYYK--GEGEKGKSSKI 121
E LQ +L L+E S W YAIFWQ S +G +L WGDGY + EGEK + +I
Sbjct: 46 ENLQNKLSDLVERPNASNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRI 105
Query: 122 KTSSAAEQEH---RKKVLRELNSLISGSTSSPTDDAVDEEVTDTEWFFLISMTQSFYVTG 178
+ E+ H RK+VL++L+ L GS +D VTDTE F L SM SF
Sbjct: 106 LSMGREEETHQTMRKRVLQKLHDLFGGSEEENCALGLDR-VTDTEMFLLSSMYFSFPRGE 164
Query: 179 GGGGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGST 238
GG PG+ + PVW+S + C R+ + G+QT+V +P+ GVVELGST
Sbjct: 165 GG-----PGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGST 219
Query: 239 EVIIQNSDLMNKVRFLF 255
+ ++ D + +R LF
Sbjct: 220 SCLPESEDSILSIRSLF 236
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 121/197 (61%), Gaps = 33/197 (16%)
Query: 486 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 545
E+KPRKRGRKPANGREE LNHVEAERQRREKLNQRFYALRAVVPN+SKMDKASLL DAI+
Sbjct: 301 EQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAIT 360
Query: 546 YINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDL 605
YI +++ K++ E++K+ +++ + + P+ D +
Sbjct: 361 YITDMQKKIRVYETEKQIMKRR------------ESNQITPAEVDYQQRHD--------- 399
Query: 606 DIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVK-MG 664
DA++R+ + HP +K++Q L+E ++ + +++++ + ++ T++ G
Sbjct: 400 ---------DAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQG 450
Query: 665 SRFYTQEQLKNVLAAKV 681
T EQLK+ L A +
Sbjct: 451 G--CTAEQLKDKLLASL 465
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 28/196 (14%)
Query: 69 LQQRLQQLIEGSREGWTYAIFWQSS-CDYSGSSMLGWGDGYYKGEGEKGKSSKIKTSSAA 127
LQQ L+ ++EGS W YA+FW +S + S +L WGDG+ + + KG S + +
Sbjct: 50 LQQGLRHVVEGS--DWDYALFWLASNVNSSDGCVLIWGDGHCRVK--KGASGE---DYSQ 102
Query: 128 EQEHRKKVLRELNSLISGSTSSPTDDAVDEE--------VTDTEWFFLISMTQSFYVTGG 179
+ E +++VLR+L+ GS DE+ +TD + F+L S+ SF
Sbjct: 103 QDEIKRRVLRKLHLSFVGS---------DEDHRLVKSGALTDLDMFYLASLYFSFRCDTN 153
Query: 180 GGGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTE 239
G P Y P+W + + R+ + G QT++ +P +GVVELGS
Sbjct: 154 KYG---PAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLR 210
Query: 240 VIIQNSDLMNKVRFLF 255
I ++ ++ V+ +F
Sbjct: 211 HIPEDKSVIEMVKSVF 226
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 103/170 (60%), Gaps = 14/170 (8%)
Query: 490 RKRGRKPANGR--------EEP--LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL 539
RKR RK R P L+HVEAE+QRREKLN RFYALRA+VP VS+MDKASL
Sbjct: 224 RKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASL 283
Query: 540 LGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHA 599
L DA+SYI L++K+ E++ + + K + K + + S +Q SN
Sbjct: 284 LSDAVSYIESLKSKIDDLETEIKKM-KMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRG 342
Query: 600 SKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMS 649
S DL+++VKI+G +A+IR+Q+ NHP + LM AL E+D V HA+ S
Sbjct: 343 S---DLEVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANAS 389
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 34/189 (17%)
Query: 68 TLQQRLQQLIEGSREGWTYAIFWQSSC-DYSGSSMLGWGDGYYKGEGEKGKSSKIKTSSA 126
LQQ+L+ ++E S + W Y IFWQ D S S L W DG++ G T+S
Sbjct: 34 VLQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKNNNSQENYTTNSI 93
Query: 127 AEQEHRKKVLRELNSLISGSTSSPTDDAVDEEVTDTEWFFLISMTQSFYVTGGGGGGGLP 186
E ++ G D E F+ SFY G P
Sbjct: 94 -----------ECELMMDGG-------------DDLELFY----AASFY-----GEDRSP 120
Query: 187 GQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQNSD 246
+ S VW++G + L S +RA++ G+ TLV IP NG++ELGS+E IIQN +
Sbjct: 121 RKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQNRN 180
Query: 247 LMNKVRFLF 255
+N+V+ +F
Sbjct: 181 FINRVKSIF 189
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 17/216 (7%)
Query: 50 ISSSSQQQQQQQQFFNQETLQQRLQ-QLIEGSRE-GWTYAIFWQSSCDYSGSSMLGWGDG 107
++ S+ + QQ ++ + +Q ++ QL +R W+YA+FW S G +L W DG
Sbjct: 1 MAVSASRVQQAEELLQRPAERQLMRSQLAAAARSINWSYALFWSISDTQPG--VLTWTDG 58
Query: 108 YYKGEGEKGK-SSKIKTSSAAEQEHRKKVLREL-NSLISG------STSSPTDDAVDEEV 159
+Y GE + K S+ ++ +S R LREL +L+SG + + P E++
Sbjct: 59 FYNGEVKTRKISNSVELTSDQLVMQRSDQLRELYEALLSGEGDRRAAPARPAGSLSPEDL 118
Query: 160 TDTEWFFLISMTQSFYVTGGGGGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFG 219
DTEW++++SMT +F G GLPG+++ + VW+ A + RA +
Sbjct: 119 GDTEWYYVVSMTYAFR-----PGQGLPGRSFASDEHVWLCNAHLAGSKAFPRALLAKSAS 173
Query: 220 LQTLVCIPSANGVVELGSTEVIIQNSDLMNKVRFLF 255
+Q+++CIP GV+ELG+T+ + + DL+++ F
Sbjct: 174 IQSILCIPVMGGVLELGTTDTVPEAPDLVSRATAAF 209
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 32/174 (18%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL 564
NHV +ER+RREKLN+ F L++++P++ +++KAS+L + I+Y+ EL+ ++Q ES +E
Sbjct: 418 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPA 477
Query: 565 QKEL---------------ASVKKELAGG--------GKDSHSGPSTSDQDLKMSNHASK 601
+ SV+KE+ G G+D P D SN
Sbjct: 478 SRPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLTMDAGSSN---- 533
Query: 602 LIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLM 655
+ V + D ++ +Q + ++ A+K L L+V S + M
Sbjct: 534 -----VTVTVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDGFM 582
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 17/216 (7%)
Query: 50 ISSSSQQQQQQQQFFNQETLQQRLQ-QLIEGSRE-GWTYAIFWQSSCDYSGSSMLGWGDG 107
++ S+ + QQ ++ + +Q ++ QL +R W+YA+FW S G +L W DG
Sbjct: 1 MALSASRVQQAEELLQRPAERQLMRSQLAAAARSINWSYALFWSISDTQPG--VLTWTDG 58
Query: 108 YYKGEGEKGK-SSKIKTSSAAEQEHRKKVLREL-NSLISG------STSSPTDDAVDEEV 159
+Y GE + K S+ ++ +S R LREL +L+SG + + P E++
Sbjct: 59 FYNGEVKTRKISNSVELTSDQLVMQRSDQLRELYEALLSGEGDRRAAPARPAGSLSPEDL 118
Query: 160 TDTEWFFLISMTQSFYVTGGGGGGGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFG 219
DTEW++++SMT +F G GLPG+++ + VW+ A + RA +
Sbjct: 119 GDTEWYYVVSMTYAFR-----PGQGLPGRSFASDEHVWLCNAHLAGSKAFPRALLAKSAS 173
Query: 220 LQTLVCIPSANGVVELGSTEVIIQNSDLMNKVRFLF 255
+Q+++CIP GV+ELG+T+ + + DL+++ F
Sbjct: 174 IQSILCIPVMGGVLELGTTDTVPEAPDLVSRATAAF 209
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 32/174 (18%)
Query: 505 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL 564
NHV +ER+RREKLN+ F L++++P++ +++KAS+L + I+Y+ EL+ ++Q ES +E
Sbjct: 416 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPA 475
Query: 565 QKEL---------------ASVKKELAGG--------GKDSHSGPSTSDQDLKMSNHASK 601
+ SV+KE+ G G+D P D SN
Sbjct: 476 SRPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLTMDAGTSN---- 531
Query: 602 LIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLM 655
+ V + D ++ +Q + ++ A+K L L+V S + M
Sbjct: 532 -----VTVTVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDGFM 580
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 15/193 (7%)
Query: 70 QQRLQQLIEGSREG--WTYAIFWQSSCDYSGSSMLGWGDGYYKGEGEKGKSSKIKTSSAA 127
++ LQ L++ + + WTY++FWQ +L WG+GYY G + K+++ +A
Sbjct: 17 KKELQGLLKTAVQSVDWTYSVFWQFC---PQQRVLVWGNGYYNGAIKTRKTTQPAEVTAE 73
Query: 128 EQE-HRKKVLREL-NSLISGSTSSPTDDAVD---EEVTDTEWFFLISMTQSFYVTGGGGG 182
E R + LREL +L++G ++S E++T+TEWF+L+ ++ SF
Sbjct: 74 EAALERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSF-----PPP 128
Query: 183 GGLPGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVII 242
G+PG+AY VW+SGA + + RA + +QT+VCIP +GVVELG+T+ +
Sbjct: 129 SGMPGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVR 188
Query: 243 QNSDLMNKVRFLF 255
++ + + + F
Sbjct: 189 EDVEFVELTKSFF 201
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 28/152 (18%)
Query: 502 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDK 561
E L+HV AER+RREKLN++F LR++VP V+KMDK S+LGD I+Y+N LR ++ E+
Sbjct: 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTH 419
Query: 562 EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQ 621
+ Q + K TS++ +EV II D ++ ++
Sbjct: 420 HEQQHKRTRTCKR------------KTSEE---------------VEVSIIENDVLLEMR 452
Query: 622 SSKKNHPAAKLMQALKELDLEVNHASMSVVND 653
++ ++Q L EL +E A + VND
Sbjct: 453 CEYRDGLLLDILQVLHELGIETT-AVHTSVND 483
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 29/189 (15%)
Query: 84 WTYAIFWQSSCDYSGSSMLGWGDGYYKGEGEKGKSSKIKTSSAAEQE------HRKKVLR 137
W+Y IFW S G +L WGDGYY G+ + K T AAE + R + LR
Sbjct: 26 WSYGIFWSVSASQPG--VLEWGDGYYNGDIKTRK-----TIQAAEVKIDQLGLERSEQLR 78
Query: 138 ELNSLI----------SGSTSSPTDDAVD-EEVTDTEWFFLISMTQSFYVTGGGGGGGLP 186
EL + S T + A+ E++TDTEW++L+ M+ F + G G+P
Sbjct: 79 ELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFNI-----GEGIP 133
Query: 187 GQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQNSD 246
G A P+W+ AE + R+ + LQT+VC P GV+E+G+TE I ++ +
Sbjct: 134 GGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEHIKEDMN 193
Query: 247 LMNKVRFLF 255
++ V+ LF
Sbjct: 194 VIQSVKTLF 202
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 501 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESD 560
EE NH +E++RREKLN+RF LR+++P++SK+DK S+L D I Y+ +L+ ++Q ES
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESC 460
Query: 561 KE--DLQKELASVKKE 574
+E D + + +K++
Sbjct: 461 RESADTETRITMMKRK 476
>sp|Q8W2F1|BH012_ARATH Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1
SV=1
Length = 526
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 26/187 (13%)
Query: 84 WTYAIFWQSSCDYSGSSMLGWGDGYYKGEGEKGKSS---KIKTSSAAEQEHRKKVLRELN 140
W+YAIFW SS G +L WG+G Y G+ +K K S K +E RK L L
Sbjct: 36 WSYAIFWSSSLTQPG--VLEWGEGCYNGDMKKRKKSYESHYKYGLQKSKELRKLYLSMLE 93
Query: 141 SLISGSTSSPTDDAVD---------------EEVTDTEWFFLISMTQSFYVTGGGGGGGL 185
SG+T S T D ++ ++++D EW++L+SM+ F L
Sbjct: 94 G-DSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVF-----SPSQCL 147
Query: 186 PGQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQNS 245
PG+A +W+ A+ N R+ + +QT+VC P GV+ELG TE+I ++
Sbjct: 148 PGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIELGVTELISEDH 207
Query: 246 DLMNKVR 252
+L+ ++
Sbjct: 208 NLLRNIK 214
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 514 REKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAES-------------D 560
R K N++F LR +VP V+++DK S+L + I Y+ EL +++ ES
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 561 KEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRI 620
E+L + + +E +G DS S + +++ K + VK+ + +I +
Sbjct: 406 TENLNDSV--LIEETSGNYDDSTKIDDNSGETEQVTVFRDK---THLRVKLKETEVVIEV 460
Query: 621 QSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM-GSRFYTQEQLKNVLAA 679
+ S +++ A +M+ L L ++ +N + K G+ + +K L
Sbjct: 461 RCSYRDYIVADIMETLSNLHMDAFSVRSHTLNKFLTLNLKAKFRGAAVASVGMIKRELRR 520
Query: 680 KVGD 683
+GD
Sbjct: 521 VIGD 524
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 26/189 (13%)
Query: 84 WTYAIFWQSSCDYSGSSMLGWGDGYYKGEGEKGKS---SKIKTSSAAEQEHRKKVLRELN 140
W+Y IFW S SG +L WGDGYY G+ + K+ S+IK + R + L EL
Sbjct: 27 WSYGIFWSVSASQSG--VLEWGDGYYNGDIKTRKTIQASEIKADQLGLR--RSEQLSELY 82
Query: 141 SLISGSTSSPTDDAVDEEVT--------------DTEWFFLISMTQSFYVTGGGGGGGLP 186
+S + SS + A +VT DTEW++L+ M+ F + G G+P
Sbjct: 83 ESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNI-----GEGMP 137
Query: 187 GQAYFGNSPVWVSGAERLANSGCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIIQNSD 246
G+ + P+W+ A + R+ + ++T+VC P GVVE+G+TE I ++ +
Sbjct: 138 GRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHITEDMN 197
Query: 247 LMNKVRFLF 255
++ V+ F
Sbjct: 198 VIQCVKTSF 206
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 499 GREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAE 558
R+E NH E++RREKLN+RF LR ++P+++K+DK S+L D I Y+ EL ++Q E
Sbjct: 435 ARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
Query: 559 SDKEDLQKE 567
S +E E
Sbjct: 495 SCRESTDTE 503
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 20/179 (11%)
Query: 481 SRVEPEKKPRKRGRKPANGREEPL--------NHVEAERQRREKLNQRFYALRAVVPNVS 532
++V+P +K + RK R +P +H+ AER+RREKL QRF AL A+VP +
Sbjct: 121 AQVQPHQKSDEFNRK-GTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLK 179
Query: 533 KMDKASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQD 592
KMDKAS+LGDA+ +I L+ ++ E K++ + E + K+ D++ S+S +D
Sbjct: 180 KMDKASVLGDALKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCED 239
Query: 593 LKMSNHASKLIDLD---IEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASM 648
DLD IEV+ D +I+I K+ AK+M +++L + + ++S+
Sbjct: 240 --------GFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSV 290
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 24/151 (15%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAISYI L+ + +
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYE-----------E 104
Query: 566 KELASVKKELAGGGKDSHSGPSTSDQDL-------KM----SNHASKLID-LDIEVKIIG 613
K+L + +EL K S S D+DL KM S ++ LI+ L+++V +G
Sbjct: 105 KKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMG 164
Query: 614 WDAM-IRIQSSKKNHPAAKLMQALKELDLEV 643
M + + +K+ KL + + L+L++
Sbjct: 165 ERTMVVSVTCNKRTDTMVKLCEVFESLNLKI 195
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 487 KKPRKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLG 541
K RKR R E + + H+ ER RR+++N+ LR+++P V + D+AS++G
Sbjct: 177 KSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG 236
Query: 542 DAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKD-SHSGPSTSDQDLKMSNHAS 600
AI ++ EL LQ ES K ++ L G+D + + S+S ++N A
Sbjct: 237 GAIEFVRELEQLLQCLESQKR---------RRILGETGRDMTTTTTSSSSPITTVANQAQ 287
Query: 601 KLIDL------------------------DIEVKIIGWDAMIRIQSSKKNHPAAKLMQAL 636
LI D+EVK++G+DAMI+I S ++ K + AL
Sbjct: 288 PLIITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAAL 347
Query: 637 KELDLEVNHASMSVVNDLMIQQATVKMGS--RFYTQE 671
++L L + H +++ + ++ VK+ S RF ++
Sbjct: 348 EDLHLSILHTNITTMEQTVLYSFNVKITSETRFTAED 384
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 29/161 (18%)
Query: 509 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKEL 568
AER+RR+KLN R YALR++VP ++K+D+AS+LGDAI+Y+ EL +++ ++LQ EL
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKEL-------QNEAKELQDEL 370
Query: 569 ASVKKELAGGGKDS-------------HSGPSTS--------DQDLKMSNHASKLIDLDI 607
+ G + H G S + D DL+ SN + ++ +
Sbjct: 371 EENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQV 430
Query: 608 EV-KIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHAS 647
+V ++ G + +++ K +LM+AL L LEV +A+
Sbjct: 431 DVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNAN 471
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 86/152 (56%), Gaps = 14/152 (9%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
+V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I Y+ EL + ++ E++ +L+
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 566 KE---LASVKKELAGGGKDSHSGPSTSDQDL-----KMSNHASKLIDLDIEV--KIIGW- 614
L + ++ ++H + + D+ K ++++++ IEV + W
Sbjct: 115 SRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWM 174
Query: 615 ---DAMIRIQSSKKNHPAAKLMQALKELDLEV 643
++ I SKK +L + L+ L+L +
Sbjct: 175 GEKTVVVCITCSKKRETMVQLCKVLESLNLNI 206
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 92/197 (46%), Gaps = 33/197 (16%)
Query: 503 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISY-------INELRTKLQ 555
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y IN+L T+L+
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 556 SAESDKEDLQKELAS-------VKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIE 608
S L + VK+EL S S PS Q + +E
Sbjct: 325 STPPSSSSLHPLTPTPQTLSYRVKEELC----PSSSLPSPKGQQPR------------VE 368
Query: 609 VKIIGWDAM-IRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVND--LMIQQATVKMGS 665
V++ A+ I + ++ M+AL L L+V A +S N L + +A
Sbjct: 369 VRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQED 428
Query: 666 RFYTQEQLKNVLAAKVG 682
EQ+K VL G
Sbjct: 429 HDVLPEQIKAVLLDTAG 445
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 478 PDSSRVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKA 537
P+ + E + KR + + +H+ AER+RREKL QRF AL A++P + KMDKA
Sbjct: 99 PEHKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKA 158
Query: 538 SLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSN 597
S+LGDAI +I L+ ++ E K++ E + K+ + ++H S+S D ++
Sbjct: 159 SVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNS 218
Query: 598 HASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASM 648
+S L +IEV++ G D +I+I K+ K+M +++L L + ++++
Sbjct: 219 SSSNLP--EIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 86/145 (59%), Gaps = 12/145 (8%)
Query: 509 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKEL 568
+ER+RR ++ + YALR++VPN++KMDKAS++GDA+ Y+ EL+++ + +SD L+ L
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASL 194
Query: 569 ASVKKELAGGGKDSHSGPSTSDQDLKMSN--HASKLIDLD-IEVKIIGWDAMIRIQSSKK 625
S GG H+ + Q + N + K+I +D I+V+ G+ +R+ +K
Sbjct: 195 NST------GGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGF--YVRLVCNKG 246
Query: 626 NHPAAKLMQALKEL-DLEVNHASMS 649
A L ++L+ L +V ++++S
Sbjct: 247 EGVAPSLYKSLESLTSFQVQNSNLS 271
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Query: 503 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKE 562
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN------- 357
Query: 563 DLQKELAS 570
DL EL S
Sbjct: 358 DLHNELES 365
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQ 565
++ +ER+RRE++NQ Y LRAVVP ++K++K + DA+ YINEL +K+ L+
Sbjct: 265 NLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLV-------EKQKLE 317
Query: 566 KELASVK----KELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIG-WDAMIRI 620
EL + KE+A + + + P K SN K ++ IEV G D +IR+
Sbjct: 318 DELKGINEMECKEIAAEEQSAIADPEAERVSSK-SNKRVKKNEVKIEVHETGERDFLIRV 376
Query: 621 QSSKKNHPAAKLMQALKELDLEV 643
K +L++A+ +LE+
Sbjct: 377 VQEHKQDGFKRLIEAVDLCELEI 399
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 499 GREEP---LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
GR EP HV AER+RR+KLN+R AL A++P + K DKA++L DAI ++ +L+ +++
Sbjct: 123 GRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVK 182
Query: 556 SAESDK---EDLQKELASVKKE---LAGGGKDSHSGPSTSDQDLKMSNHAS--KLIDLDI 607
E ++ + + + + VK+ L S S + S+ S K I
Sbjct: 183 KLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMI 242
Query: 608 EVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLE-VNHASMSVVNDLMIQQATVKMGSR 666
E ++ D +IR+ K K++ +L++ LE VN ++ N ++ KM ++
Sbjct: 243 EARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNK 302
Query: 667 FY--TQEQLKNVLAA 679
F +E +KN+ A
Sbjct: 303 FSRPVEEVVKNIRVA 317
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 490 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINE 549
+KR K G +P ++ AER+RR++LN R LR++VP ++KMD+ S+LGDAI Y+ E
Sbjct: 138 KKRSNKKLEG--QPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKE 195
Query: 550 LRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEV 609
L K+ + D+++L G +SH +++ + ++ L EV
Sbjct: 196 LLDKINKLQEDEQEL--------------GSNSHLSTLITNESMVRNS-------LKFEV 234
Query: 610 KIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKMGSRFY- 668
+ I I K + L+ L LE+ +S +D +Q + ++G + Y
Sbjct: 235 DQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYM 294
Query: 669 -TQEQLKNVLAAKVG 682
T E K L G
Sbjct: 295 VTSEATKQALIRNAG 309
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 502 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDK 561
+P ++ AER+RR++LN R LR++VP +SKMD+ S+LGDAI Y+ EL K+ + ++
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 562 EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQ 621
++L G +SH S DLK N L+ + +I D R+
Sbjct: 235 QEL------------GNSNNSHH--SKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVD 280
Query: 622 SSKKNHPAAKL--MQALKELDLEVNHASMSVVNDLMIQQATVKMGSR---FYTQEQLKNV 676
P L + L+ L LE+ +S +D + QA+ G+ F T E +K
Sbjct: 281 ICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSL-QASCSEGAEQRDFITSEDIKQA 339
Query: 677 LAAKVG 682
L G
Sbjct: 340 LFRNAG 345
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 64.3 bits (155), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 10/183 (5%)
Query: 484 EPEKKPRKRGRKPANGREEPLN--HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLG 541
EP + R++ +E ++EAER+RREKL+ R ALR+ VP V+ M KAS++
Sbjct: 9 EPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVE 68
Query: 542 DAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASK 601
DAI+YI EL+ +++ ++++ + +E D P DL + K
Sbjct: 69 DAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQT----DPMIKPEVETSDL--NEEMKK 122
Query: 602 L-IDLDIEVKIIGWDAM-IRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQA 659
L I+ ++++ IG ++I + K++ K M+ ++ L E+ S++ N ++ A
Sbjct: 123 LGIEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISA 182
Query: 660 TVK 662
+V+
Sbjct: 183 SVQ 185
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 22/160 (13%)
Query: 494 RKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTK 553
R P +E HV AER+RREKL+++F AL A++P + K DK ++L DAIS + +L+ +
Sbjct: 112 RSPVLAKE----HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQ 167
Query: 554 LQSAESDKEDLQK--ELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLD----- 606
L++ + +KE ++ + VKK D++ +S S I+ D
Sbjct: 168 LRTLKEEKEATRQMESMILVKK-----------SKVFFDEEPNLSCSPSVHIEFDQALPE 216
Query: 607 IEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHA 646
IE KI D +IRI K ++ ++ L + ++
Sbjct: 217 IEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENS 256
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 479 DSSRVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKAS 538
DS +E K+ R++GR + +P ER+RR LN+R+ AL+ ++P+ SK D+AS
Sbjct: 193 DSGIIEFSKEIRRKGR--GKRKNKPFT---TERERRCHLNERYEALKLLIPSPSKGDRAS 247
Query: 539 LLGDAISYINELRTKL 554
+L D I YINELR ++
Sbjct: 248 ILQDGIDYINELRRRV 263
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 9/189 (4%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR+++N+ LR+++P+ + D+AS++G AI+Y+ EL LQS E +
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKR 174
Query: 562 ---EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMI 618
D + + S L G D S P S + S +IEV + A I
Sbjct: 175 TRTHDPKGDKTSTSS-LVGPFTDFFSFPQYSTKSSSDVP-ESSSSPAEIEVTVAESHANI 232
Query: 619 RIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM--GSRFYTQEQLKNV 676
+I + KK KL+ +L+ L L + H +++ +++ ++ +V++ GS+ T + +
Sbjct: 233 KIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATA 292
Query: 677 LAAKVGDTQ 685
L + Q
Sbjct: 293 LNQTIRRIQ 301
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +AER+RR ++N +F LR ++PN+ K DKAS+LG+ + Y NEL+ +Q
Sbjct: 96 HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQ 145
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 489 PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAISY 546
P K + N R +NH+ ER RR ++N+ +LRA++P + + D+AS++G AI+Y
Sbjct: 166 PSKNNEEIENQR---INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINY 222
Query: 547 INELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLD 606
+ L +QS ES K Q+ E+ + SG S++D + +
Sbjct: 223 VKVLEQIIQSLESQKRTQQQS----NSEVVENALNHLSGISSNDLWTTLEDQTCI---PK 275
Query: 607 IEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMS 649
IE +I +++Q KK K + +L++L L V H +++
Sbjct: 276 IEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNIT 318
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR+++N+ LR+++P + D+AS++G AI+Y+ EL LQS E
Sbjct: 125 MTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPP- 183
Query: 562 EDLQKELASVKKELAGGGKD-------SHSGPSTSDQDL-KMSNHASKLID----LDIEV 609
E G G D S SGP + + SN + +IEV
Sbjct: 184 -------VKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEV 236
Query: 610 KIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHASMSVVNDLMIQQATVKM--GSRF 667
++ A ++I + K+ KL+ +++ L L + H +++ +D ++ +VK+ GS+
Sbjct: 237 TMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQL 296
Query: 668 YTQEQL 673
T E +
Sbjct: 297 NTVEDI 302
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 461 GAGDSDHSDLEASVVKDPDSSRVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQR 520
G+G + +A+ + +P+ KP+ R R+ +P H AER RRE++ +R
Sbjct: 100 GSGGQTQTQSQATASATTGGATAQPQTKPKVRARR--GQATDP--HSIAERLRRERIAER 155
Query: 521 FYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGK 580
+L+ +VPN +K DKAS+L + I Y+ L+ +++ + +S E AGG
Sbjct: 156 MKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGG-- 213
Query: 581 DSHSGPSTSDQDLKMSNH-ASKLIDLDI 607
SH S+S + KM+ H +KL++ D+
Sbjct: 214 -SHENTSSSGE-AKMTEHQVAKLMEEDM 239
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKL 554
H ++ER+RR+K+NQR L+ +VPN SK DKAS+L + I Y+ +L+ ++
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 491 KRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINEL 550
++GR R P ER+RR N RF+ L+ ++PN +K+D+AS++G+AI YI EL
Sbjct: 238 RKGRGSRKSRTSP-----TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL 292
Query: 551 RTKLQSAESDKEDLQKE 567
L++ E K ++K+
Sbjct: 293 ---LRTIEEFKMLVEKK 306
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 20/111 (18%)
Query: 470 LEASVVKDPDSSRVEPEKKPRKRG--------------RKPANGRE---EPLNHVEAERQ 512
LE ++ +DP + +PEK PR R P N E + + H+ ER
Sbjct: 65 LETNIKRDPGQTD-DPEKDPRTENGAVTVKEKRKRKRTRAPKNKDEVENQRMTHIAVERN 123
Query: 513 RREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
RR ++N+ +LR+++P + + D+AS++G AI +I EL LQS E++K
Sbjct: 124 RRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEK 174
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR ++NQ LR+++P K D+AS++G AI +I EL KL S E+ K
Sbjct: 88 MTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQK 147
Query: 562 ED---LQKELASVKKELAGGGKDSHSGPST-------------SDQDLKMSNHASKLIDL 605
L + + S + + G +++ PS+ S ++ S + K
Sbjct: 148 HHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRNGSTSSVKTPME 207
Query: 606 DIEVKIIGWDAMIRIQSSKK 625
D+EV +I A IRI S ++
Sbjct: 208 DLEVTLIETHANIRILSRRR 227
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 39/50 (78%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +ER+RR+++N++ AL+ ++PN +K+DKAS+L +AI Y+ L+ ++Q
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 504 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAESDK 561
+ H+ ER RR ++N +LR+++P+ + + D+AS++G AI ++ L +LQS E+ K
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252
Query: 562 EDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQ 621
Q + K+++ + +S + S L+ SN + L IE +I ++IQ
Sbjct: 253 RSQQSD--DNKEQIP----EDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNLKIQ 306
Query: 622 SSKKNHPAAKLMQALKELDLEVNHASMS 649
++K + + L++L V H +++
Sbjct: 307 CTRKQGQLLRSIILLEKLRFTVLHLNIT 334
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 492 RGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINEL 550
R RKP R+ H ER+RR++ N++ AL+ ++PN K DKASLL +AI Y+ L
Sbjct: 219 RTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTL 278
Query: 551 RTKLQ 555
+ ++Q
Sbjct: 279 QLQVQ 283
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 501 EEPLNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRTKLQSAE 558
++ ++HV ER RR+++N+ LR+++P V + D+AS++G + YI+EL+ LQS E
Sbjct: 99 QQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
Query: 559 SDKE 562
+ K+
Sbjct: 159 AKKQ 162
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query: 597 NHASKLID----------LDIEVKIIGWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHA 646
NH S +I+ D+EVK G + +++ S K K++ AL++L LE+
Sbjct: 268 NHESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQV 327
Query: 647 SMSVVNDLMIQQATVKMG 664
+++ V++ M+ T+K+G
Sbjct: 328 NINTVDETMLNSFTIKIG 345
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 39/51 (76%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQS 556
H +E++RR K+N++ AL+ ++PN +K DKAS+L +AI Y+ +L+ ++Q+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQT 148
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +ER+RR+++N+R AL+ ++P +K DKAS+L +AI Y+ L+ ++Q
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQ 338
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 27/155 (17%)
Query: 510 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINEL--------------RTKLQ 555
ER+RR RF L+ ++PN +K D+AS++G+AI YI EL R K +
Sbjct: 221 ERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRVKQR 280
Query: 556 SAESD---KEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKII 612
+ E D E+ + + V++ L ++ L+ S K D++V+II
Sbjct: 281 NREGDDVVDENFKAQSEVVEQCLINKKNNA----------LRCSWLKRKSKFTDVDVRII 330
Query: 613 GWDAMIRIQSSKKNHPAAKLMQALKELDLEVNHAS 647
+ I+I KK + + + + +L+L+++H +
Sbjct: 331 DDEVTIKIVQKKKINCLLFVSKVVDQLELDLHHVA 365
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 487 KKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISY 546
+KPR R R+ +P H AER RRE++ +R +L+ +VPN +K DKAS+L + I Y
Sbjct: 95 QKPRVRARR--GQATDP--HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 150
Query: 547 INELRTKLQ 555
+ L+ +++
Sbjct: 151 VRFLQLQVK 159
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 39/50 (78%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 555
H +E++RR ++N++ AL++++PN +K DKAS+L +AI Y+ +L+ ++Q
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 251
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 506 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAES 559
H AE++RR+++N ALR +VPN K+DKA+LL I + EL+ K +AES
Sbjct: 67 HRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK--AAES 118
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 485 PEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 544
P+ + + R R+ +P H AER RRE++ +R AL+ +VPN +K DKAS+L + I
Sbjct: 132 PQSRTKIRARR--GQATDP--HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEII 187
Query: 545 SYINELRTKLQ 555
Y+ L+ +++
Sbjct: 188 DYVKFLQLQVK 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.125 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,460,874
Number of Sequences: 539616
Number of extensions: 11074333
Number of successful extensions: 81019
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 629
Number of HSP's that attempted gapping in prelim test: 67213
Number of HSP's gapped (non-prelim): 10854
length of query: 685
length of database: 191,569,459
effective HSP length: 124
effective length of query: 561
effective length of database: 124,657,075
effective search space: 69932619075
effective search space used: 69932619075
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)