BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005652
(685 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2
Length = 691
Score = 312 bits (799), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 207/300 (69%)
Query: 352 RQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAER 411
R+ P+ EEWT +D+EGR+++ + +++ IF GG+ H LR++ W FLLGY+ +DST ER
Sbjct: 313 RREPVSLEEWTKNIDSEGRILNVDNMKQMIFRGGLSHALRKQAWKFLLGYFPWDSTKEER 372
Query: 412 EYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPN 471
L+ K EY +K QW+SIS EQ +R ++ R+ + LI+KDV RTDR+ F++G DNP
Sbjct: 373 TQLQKQKTDEYFRMKLQWKSISQEQEKRNSRLRDYRSLIEKDVNRTDRTNKFYEGQDNPG 432
Query: 472 VHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQ 531
+ LL DIL+TY Y+FDLGY QGMSDLLSP+L+VME+E +FWCF + M+++ NF
Sbjct: 433 LILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFEEQM 492
Query: 532 NGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVL 591
GM +QL LS L+ LLD+ +Y + D +FCFRW+LI+FKREF + +RLWEV+
Sbjct: 493 QGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVM 552
Query: 592 WTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEALCI 651
WT + HL +C AIL+ + +IM + F+ +LK INELS +ID++ IL AEA+ +
Sbjct: 553 WTELPCTNFHLLLCCAILESEKQQIMEKHYGFNEILKHINELSMKIDVEDILCKAEAISL 612
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 108 FTEVRSIRRHTPAFGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVEDAN 167
T+++SI+++ GW Y++ L + P L+F+ G + + +++++V+L S +D
Sbjct: 132 LTDLKSIKQNKEGMGWSYLVFCLKDDVVLPALHFHQGDSKLLIESLEKYVVLCESPQDKR 191
Query: 168 VFLVNDFDNRLQRTLSSL 185
LVN + L ++ +L
Sbjct: 192 TLLVNCQNKSLSQSFENL 209
>sp|Q9CXF4|TBC15_MOUSE TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1
Length = 671
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 205/300 (68%)
Query: 352 RQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAER 411
R+ P+ EEW LD EGR++ +++++IF GG+ H LR++ W FLLGY+ +DST ER
Sbjct: 296 RREPVSLEEWNKSLDPEGRLVAVESMKQKIFRGGLSHSLRKQAWKFLLGYFPWDSTKEER 355
Query: 412 EYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPN 471
L+ K EY +K QW+S+S Q +R ++ R+ + LI+KDV RTDR+ F++G DNP
Sbjct: 356 TQLQKQKTDEYFRMKLQWKSVSEAQEKRNSRLRDYRSLIEKDVNRTDRTNKFYEGQDNPG 415
Query: 472 VHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQ 531
+ LL DIL+TY Y+FDLGY QGMSDLLSP+L+VME+E +FWCF + M+++ NF
Sbjct: 416 LILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFEEQM 475
Query: 532 NGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVL 591
GM +QL LS L+ LLD+ +Y + D +FCFRW+LI+FKREF + +RLWEV+
Sbjct: 476 QGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVM 535
Query: 592 WTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEALCI 651
WT ++ HL +C AIL+ + +IM + F+ +LK INELS +ID++ IL AEA+ +
Sbjct: 536 WTELPCKNFHLLLCCAILESEKQQIMAKHYGFNEILKHINELSMKIDVEDILCKAEAISL 595
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 43/78 (55%)
Query: 108 FTEVRSIRRHTPAFGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVEDAN 167
+++S+++ GW Y++ L + P L+F+ G + + +++++V+L S +D+
Sbjct: 132 LADLKSVKQSKEGMGWSYLVFCLKDDVMLPALHFHQGDSKLLIESLEKYVVLCESPQDSR 191
Query: 168 VFLVNDFDNRLQRTLSSL 185
LVN + L ++ +L
Sbjct: 192 TLLVNCQNKSLSQSFENL 209
>sp|Q8BYH7|TBC17_MOUSE TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=2
Length = 645
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 195/317 (61%), Gaps = 3/317 (0%)
Query: 333 FELIDCKEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRR 392
FE+I C E + V R PP+ EEW ++ EGR+ + L+ RIF GG+ LRR
Sbjct: 261 FEVISCVELGQRPTV---ERAPPVTEEEWNRYVGPEGRLQNVPELKNRIFSGGLSPGLRR 317
Query: 393 EVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDK 452
E W FLLGY +++S+ E + K EY +K QW+S+S EQ RR + + LI++
Sbjct: 318 EAWKFLLGYLSWESSAEEHKAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRSLIER 377
Query: 453 DVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQS 512
DV RTDR+ F++G +NP + LL DILLTY Y+FDLGY QGMSDLLSPILFV+++E +
Sbjct: 378 DVSRTDRTNKFYEGPENPGLSLLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDA 437
Query: 513 FWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVL 572
FWCF ME + NF Q M QL L L+ +LD PL ++ D + FCFRW+L
Sbjct: 438 FWCFCGFMELVHGNFEESQETMKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLL 497
Query: 573 IQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINE 632
I FKREF + +RLWEVLWT +LHL V AIL R+ +M + +LK INE
Sbjct: 498 IWFKREFPFPDVLRLWEVLWTGLPGPNLHLLVACAILDMERDTLMLSGFGSNEILKHINE 557
Query: 633 LSGRIDLDAILRDAEAL 649
L+ ++ ++ +L AEAL
Sbjct: 558 LTMKLSVEDVLTRAEAL 574
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 105 AVPFTEVRSIRRHTPAFGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVE 164
+V E++SIRR P W Y+++V +G + P L+F+ GG R L + +++LL S +
Sbjct: 119 SVSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGTRALLRVLSRYLLLASSPQ 178
Query: 165 DANVFLV 171
D+ ++LV
Sbjct: 179 DSRLYLV 185
>sp|Q9HA65|TBC17_HUMAN TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=1 SV=2
Length = 648
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 191/317 (60%), Gaps = 3/317 (0%)
Query: 333 FELIDCKEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRR 392
FE+I C E V R PP+ EEW + EGR+ L+ RIF GG+ LRR
Sbjct: 261 FEVISCVELGPRPTV---ERGPPVTEEEWARHVGPEGRLQQVPELKNRIFSGGLSPSLRR 317
Query: 393 EVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDK 452
E W FLLGY +++ T E + K EY +K QW+S+SPEQ RR + + LI++
Sbjct: 318 EAWKFLLGYLSWEGTAEEHKAHIRKKTDEYFRMKLQWKSVSPEQERRNSLLHGYRSLIER 377
Query: 453 DVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQS 512
DV RTDR+ F++G +NP + LL DILLTY Y+FDLGY QGMSDLLSPIL+V+++E +
Sbjct: 378 DVSRTDRTNKFYEGPENPGLGLLNDILLTYCMYHFDLGYVQGMSDLLSPILYVIQNEVDA 437
Query: 513 FWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVL 572
FWCF ME + NF Q M QL L L+ +LD L ++ D + FCFRW+L
Sbjct: 438 FWCFCGFMELVQGNFEESQETMKRQLGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRWLL 497
Query: 573 IQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINE 632
I FKREF + +RLWEVLWT +LHL V AIL R+ +M + +LK INE
Sbjct: 498 IWFKREFPFPDVLRLWEVLWTGLPGPNLHLLVACAILDMERDTLMLSGFGSNEILKHINE 557
Query: 633 LSGRIDLDAILRDAEAL 649
L+ ++ ++ +L AEAL
Sbjct: 558 LTMKLSVEDVLTRAEAL 574
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 52/190 (27%)
Query: 39 ESEGAELVYLKDNVTIHPT----QFASERISGRLKLIKQGSSLFMTWIPYK--GQNSNTR 92
E G +V+ K V +H + Q I+G ++++++ + + + W P + G ++
Sbjct: 2 EGAGYRVVFEKGGVYLHTSAKKYQDRDSLIAGVIRVVEKDNDVLLHWAPVEEAGDSTQIL 61
Query: 93 LSEKDRN-----------------------LYTIR-----------------------AV 106
S+KD + + T+R +V
Sbjct: 62 FSKKDSSGGDSCASEEEPTFDPDYEPDWAVISTVRPQLCHSEPTRGAEPSCPQGSWAFSV 121
Query: 107 PFTEVRSIRRHTPAFGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVEDA 166
E++SIRR P W Y+++V +G + P L+F+ GG R L + +++LL S +D+
Sbjct: 122 SLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGTRALLRVLSRYLLLASSPQDS 181
Query: 167 NVFLVNDFDN 176
++LV D+
Sbjct: 182 RLYLVFPHDS 191
>sp|Q9UUH7|GYP7_SCHPO GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp7 PE=3 SV=1
Length = 743
Score = 262 bits (669), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 214/710 (30%), Positives = 325/710 (45%), Gaps = 135/710 (19%)
Query: 45 LVYLKDNVTIHPTQFASERISGRLKLIKQ---------GSSLFMTWIPYKG--------- 86
L++ K V +HPT + ISG L L K GS + ++W+P
Sbjct: 31 LLFSKSKVFVHPTSKMKDNISGYLSLSKSKALGNSSVAGSDILLSWVPDSFLKNRPRDLS 90
Query: 87 --QNSNTRLSEKDRNLYTIR-------AVPFTEVRSIRRHTPAFGWQYIIVVLS---SGL 134
QN+ T + R I +V + SI P +GW Y +V++ SG
Sbjct: 91 VFQNAETLSNGSIREWVEIPQHLDYSFSVRLCSIYSIIFRPPRYGWNYGSIVINLRDSGE 150
Query: 135 AFPPLYFYTG----------------------------GVREFLATIKQHVLLVRSVEDA 166
+ PPL+F+ G L +K++ L +S ++
Sbjct: 151 SLPPLFFHDDECISTIEYGKQITRDRFDPFDESGNMFWGGTHLLMQLKKYASLEQSSHES 210
Query: 167 NVFLVNDFDNRLQRTLSSLELPRAVS--IASGSSTPVSIGDSPTNVNLERTNGGLGHDSH 224
++LVN S+EL + +S + SSTP + S + N R
Sbjct: 211 QLYLVNPSPED-TVAFQSVELQKVISNNRLNSSSTPPTPRSSSSIFNPFRR--------- 260
Query: 225 SISQFHGRQKQKAQDPARDISIQVLEKFSLVTKFARETTSQLFRENHSNGFGA------- 277
D+S VLE+FS VT + + +L +
Sbjct: 261 ---------------ALHDLSFTVLERFSRVTNYGKSEVDRLMEHKVTKSILPHLPRELQ 305
Query: 278 --FEKKFDSQSALDFDHKASYDT---ETIV------NEIPVAPDPVEKISSRKHIHDEEA 326
E K + ++D + E IV N PV V + R E
Sbjct: 306 VLLESKRVQKLTEEYDPARMFLARWAEGIVEQSESNNSQPVNNAGVWTDAQR------EE 359
Query: 327 VTNVGTFELIDCKEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGRV-MDSNALRKRIFYGG 385
+++G FEL+ +E K R PL E+W + + G++ +D + + IF+GG
Sbjct: 360 DSSLGPFELVYIEERVK--------RDDPLSVEQWNSMFNAHGKLQVDVHRVLGIIFHGG 411
Query: 386 VDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQW-QSISPEQARRFTKFR 444
+ LR+EVW FLL Y +DST ER + + EY +KR+W + I + R+ F
Sbjct: 412 IQPSLRKEVWPFLLSVYPWDSTSEERRVIYLSLQEEYCTLKRKWYEDIHKQFNDRW--FI 469
Query: 445 ERKGLIDKDVVRTDRSVTFFDGDDNP-------------NVHLLRDILLTYSFYNFDLGY 491
E++ I+KDV RTDR +F +D P N+ +++DILLTY+ Y+ +LGY
Sbjct: 470 EQRNRIEKDVHRTDRQHEYFQIEDLPHPDPQSTFTGTNMNMEMMKDILLTYNEYDTELGY 529
Query: 492 CQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNP 551
QGMSDLL+PI D + +FW V LM+RL NF RDQ+GMH QL L L+E +D
Sbjct: 530 VQGMSDLLAPIYVTFNDNALTFWGMVGLMKRLHFNFLRDQSGMHRQLDTLRLLIEFMDPE 589
Query: 552 LHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKR 611
L + ++ D N F FR +LI FKREF++E ++LW+VL+T+YLS H++V AI +R
Sbjct: 590 LFAHLEKTDSSNLFCFFRMLLIYFKREFDWEVLLKLWDVLFTNYLSYDYHIFVAYAIAER 649
Query: 612 YRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEALCICAGENGAASI 661
+R ++ + FD +LK+ NELSG++ L+ L AE C +N A I
Sbjct: 650 HREVLLNQTSAFDEVLKYFNELSGKLALEPTLICAEQ-CFYQFKNKLALI 698
>sp|P09379|GYP7_YARLI GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GYP7 PE=3 SV=2
Length = 730
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 203/700 (29%), Positives = 324/700 (46%), Gaps = 131/700 (18%)
Query: 43 AELVYLKDNVTIHPTQFASERISGRLKLIK-QGSS----LFMTWIPYK------------ 85
+L + V +HPT + + I G L L K +G++ + + WIP
Sbjct: 12 TQLTSINHQVYVHPTPSSKDNIPGFLALAKPRGATTDKEILVAWIPESKLQESAADFESY 71
Query: 86 --------GQNSNTRLSEKDRNLYTIR---------AVPFTEVRSIRRHTPAFGWQYIIV 128
G +++ L+ + + ++P +++ S++ P+ GW + +
Sbjct: 72 VKVDIKESGTPASSSLNLAETLVSPPPSSSFSSYAFSIPISDIFSLQVKQPSLGWWWGSI 131
Query: 129 VL---SSGLAFPPLYFYTG-----------------------------GVREFLATIKQH 156
+ S PPLYF+ G F+ + ++
Sbjct: 132 TIHTRSKEDQLPPLYFHDAESQSTIMEQKRRNKKFETFDSESGSSMFWGGDHFIQVLSKY 191
Query: 157 VLLVRSVEDANVFLVNDFDNRLQRTLSSLELPRAVSIASGSSTPVS-IGDSPTNVNLERT 215
L R+ D + LVN + +R ++ GS P + P R
Sbjct: 192 ANLERAESDHSFLLVNPREGDAERF--------GTNLTGGSEEPSQLVAGIPG-----RG 238
Query: 216 NGGLGHDSHSISQFHGRQKQKAQDPARDISIQVLEKFSLVTKFARETTSQLFRENHSNGF 275
GG D G Q QKA DI +L + VT+ R+ + ++ +
Sbjct: 239 AGGDPVD-------RGAQVQKA---FSDIRWGLLSNLAKVTQLTRKVSQGVWDSSPQPVK 288
Query: 276 GAFEKKFDSQSALDFDHKASYDTETIVNEIPVAPDPVEKISSRKHIHDE--EAVTNVGTF 333
K + DFD Y + ++ + ++ + DE E V++ G F
Sbjct: 289 QLLMKPEVKKIGDDFDSARIYLAKWALS----VAEESQRAKLKVLFDDELRELVSDEG-F 343
Query: 334 ELIDCKEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGR-VMDSNALRKRIFYGGVDHKLRR 392
ELID + R+ + EW F D GR ++ N +++RIF+GG+ +R
Sbjct: 344 ELIDAEN--------NPQRRNEVSLAEWNAFFDYNGRLIVTVNEVKERIFHGGLAPAVRP 395
Query: 393 EVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDK 452
E W FLLG Y +DST AER+ L + +Y +K++W E R +R++ I+K
Sbjct: 396 EGWLFLLGVYPWDSTAAERKELVSKLRVDYNRLKKEWW--VQEDKERDDFWRDQLSRIEK 453
Query: 453 DVVRTDRSVTFFDGDD---------------------NPNVHL--LRDILLTYSFYNFDL 489
DV RTDR++TFF D N N+HL LRD+L+TY+ +N +L
Sbjct: 454 DVHRTDRNITFFAECDAKKDGDDDNYDKDEFGFSSQINSNIHLIQLRDMLITYNQHNKNL 513
Query: 490 GYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLD 549
GY QGMSDLLSP+ V++D++ +FW F A MER+ N+ RDQ+GM +QL L LV+ +
Sbjct: 514 GYVQGMSDLLSPLYVVLQDDTLAFWAFSAFMERMERNYLRDQSGMRNQLLCLDHLVQFML 573
Query: 550 NPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAIL 609
L+ + ++ + N FF FR +L+ FKRE ++ +RLWEVLWT YLS L+VC+AIL
Sbjct: 574 PSLYKHLEKTESTNLFFFFRMLLVWFKRELLWDDVLRLWEVLWTDYLSSQFVLFVCLAIL 633
Query: 610 KRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEAL 649
++++ ++ FD +LK++NELS IDLD +L AE L
Sbjct: 634 DKHKDVMIDHLAGFDEILKYMNELSMTIDLDELLVRAELL 673
>sp|Q8TBP0|TBC16_HUMAN TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=2 SV=1
Length = 767
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 188/301 (62%), Gaps = 14/301 (4%)
Query: 356 LGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLR 415
LG W L+ G+V + LRK IF+GG+D +R EVW FLL YY+++ST ERE LR
Sbjct: 396 LGVSAWLNHLNELGQVEEEYKLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALR 455
Query: 416 CIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLL 475
K+ EY I+++ S++PE+ R F +R + +DKDVVRTDR+ FF G+DNPNV +
Sbjct: 456 LQKRKEYSEIQQKRLSMTPEEHRAF--WRNVQFTVDKDVVRTDRNNQFFRGEDNPNVESM 513
Query: 476 RDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMER-LGPNFNRDQNGM 534
R ILL Y+ YN +GY QGMSDL++PIL + DES +FWCFV LM+ + + RD++ M
Sbjct: 514 RRILLNYAVYNPAVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFVSSPRDED-M 572
Query: 535 HSQLFALSKLVELLDNPLHNYFKQN------DCLNYFFCFRWVLIQFKREFEYEKTMRLW 588
QL L +L+ L H F Q+ D L FC RW+L+ FKREF + +R+W
Sbjct: 573 EKQLLYLRELLRL----THVRFYQHLVSLGEDGLQMLFCHRWLLLCFKREFPEAEALRIW 628
Query: 589 EVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEA 648
E W HY +++ HL++CVAI+ Y + ++ +Q+ D +L L+ ++ + +LR A +
Sbjct: 629 EACWAHYQTDYFHLFICVAIVAIYGDDVIEQQLATDQMLLHFGNLAMHMNGELVLRKARS 688
Query: 649 L 649
L
Sbjct: 689 L 689
>sp|Q6BU76|GYP7_DEBHA GTPase-activating protein GYP7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GYP7 PE=3 SV=2
Length = 757
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 192/738 (26%), Positives = 321/738 (43%), Gaps = 166/738 (22%)
Query: 32 SKRSSSSESEGAELVYLKDNVTIHPTQFASERISGRLKLIKQGSS----LFMTWIPYKGQ 87
+KR S S EL+Y K +HPT + I G L L + ++ + ++++ K
Sbjct: 7 AKRKKSISSNEVELLYTKSKTYLHPTTSKKDNIPGYLSLSRGANAANRDIIISFMSEKQL 66
Query: 88 NS--------------------------NTRLSEKDRNLYTIR------------AVPFT 109
+S N+R S K RNL + ++P +
Sbjct: 67 SSEELKAYENVDIADLQDDLEALKLGGTNSRSSGK-RNLNIVSKPPTSSAFGFCFSIPIS 125
Query: 110 EVRSIRRHTPAFGWQY--IIVVLSSGLAFPPLYF-------------------------- 141
V SI+ P+ GW + II+ G P ++F
Sbjct: 126 FVYSIQVRKPSVGWWFGSIIINTQDGEKLPIVFFHDDESPSTLKNQKVRNQRFDPFGDNG 185
Query: 142 --YTGGVREFLATIKQHVLLVRSVEDANVFLVNDFDNRLQRTLSSLELPRAVSIASGSST 199
Y GG +F+ + + + +S + +V+L+N N L R + + P+ +
Sbjct: 186 EMYWGG-SDFMNALGKFADVQKSSVEPSVYLINPESNDL-RNFAPFKEPKTAKTETNQE- 242
Query: 200 PVSIGDSPTNVNLERTNGGLGHDSHSISQFHGRQKQKAQDPARDISIQVLEKFSLVTKFA 259
P + D +++F K K VLE + +
Sbjct: 243 PFKLPD--------------------VNKFFANAKWK-----------VLETVATFSAKT 271
Query: 260 RETTSQLFRENHSNGFGAFEKKFDSQS-ALDFDHKASYDTETIVNEIPVAPDPVEKISSR 318
R L EN K + Q +FD Y + A + + R
Sbjct: 272 RNQVLDLVDENAPMPIKQIINKPEVQKIGNEFDSARVYLAKWAAQVKEEAEE-----AHR 326
Query: 319 KHIHDEEAVTNVG-------TFELIDCKEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGRV 371
K+ D+E + E++ +E K + R+ P+ EW D GR+
Sbjct: 327 KYQLDDEIYNKINKELGVGSNTEILTDEEVSKTS------RRKPISKVEWEGLFDFSGRL 380
Query: 372 MDS-NALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQ 430
+ S + ++ RIF+GG++ +R E W FLL Y +DS+ ER+ LR ++ YE IK +W
Sbjct: 381 IISIDEIKDRIFHGGLEDCIRGEAWLFLLNVYPWDSSAEERKTLRNSFQTAYEEIKLKW- 439
Query: 431 SISPEQARRFTKFRERKGLIDKDVVRTDRSVTFF-------------------------- 464
++ + R ++++K I+KD+ RTDR+++ F
Sbjct: 440 -VNDDDKRSVDFWKDQKHRIEKDINRTDRNLSIFQNKKKISISGVGSDRLPTTRESSPET 498
Query: 465 --DGDD---------NPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSF 513
+ DD NP++ +R+ILLTY+ +N +LGY QGM+DLLSP+ +DES +F
Sbjct: 499 PDEADDDEFDVSNITNPHLFKMREILLTYNEHNVNLGYVQGMTDLLSPLYVTFQDESLTF 558
Query: 514 WCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLI 573
W FV M+R+ NF RDQ+GM +Q+ L++LV+ + L + ++ + + +F FR +L+
Sbjct: 559 WAFVNFMDRMERNFLRDQSGMKNQMLTLNELVQFMLPDLFKHLEKCESTDLYFFFRMLLV 618
Query: 574 QFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINEL 633
FKREFE+ + LWE+LWT Y S HL+ +A+L I FD +LK++N+L
Sbjct: 619 WFKREFEWSSVLSLWEILWTDYYSGQFHLFFALAVLSDNERIIRQNLSRFDEVLKYMNDL 678
Query: 634 SGRIDLDAILRDAEALCI 651
S ++L+ +L AE L +
Sbjct: 679 SMNMNLNHLLIRAELLFL 696
>sp|Q6FWI1|GYP7_CANGA GTPase-activating protein GYP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GYP7 PE=3 SV=1
Length = 745
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 187/325 (57%), Gaps = 26/325 (8%)
Query: 352 RQPPLGSEEWTTFLDNEGRV-MDSNALRKRIFYGGV-DHKLRREVWAFLLGYYAYDSTYA 409
R P+ ++W + D+EGR+ + N ++ IF+GG+ D R+EVW FLLG Y +DS+
Sbjct: 356 RNHPMTKQKWNSLFDSEGRLTVTVNEVKDYIFHGGLADDATRKEVWPFLLGVYPWDSSED 415
Query: 410 EREYLRCIKKSEYENIKRQW--QSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGD 467
ER+ LR EY +K++W + ++ + ++++ I+KDV R DR++ + +
Sbjct: 416 ERKQLRKALHDEYMELKQKWVDREVNLDNDEE-EYWKDQLFRIEKDVKRNDRNIDIYKYN 474
Query: 468 ---------------------DNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVM 506
NPN+ L DIL TY+ +N +LGY QGM+DLLSP+ +++
Sbjct: 475 TSDNLPFPEDTAPTTDDDDSIKNPNLKKLADILTTYNIFNPNLGYVQGMTDLLSPLYYII 534
Query: 507 EDESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFF 566
DE +FWCF MER+ NF RDQ+G+ Q+ AL+ L +L+ L + ++ D + FF
Sbjct: 535 RDEETTFWCFTNFMERMERNFLRDQSGIRDQMLALTDLCQLMLPRLSAHLQKCDSSDLFF 594
Query: 567 CFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTL 626
CFR +L+ FKREF Y+ +WEV +T + S L+ +AIL++ + I+ FD +
Sbjct: 595 CFRMLLVWFKREFNYDDIFNIWEVFFTDFYSSQYQLFFMLAILQKNSSPIVNNLQTFDQV 654
Query: 627 LKFINELSGRIDLDAILRDAEALCI 651
+K+ N+L+ +++ ++ +E L I
Sbjct: 655 IKYFNDLNSKMNWRDLMVRSELLFI 679
Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 28/125 (22%)
Query: 44 ELVYLKDNVTIHPTQFASERISGRLKLIKQGSSLFMT-----WIPYKGQNSNTRLSEKDR 98
EL++ K V IHPT+ + +SG L + Q +S +T WIP +NS L+E+D
Sbjct: 4 ELLFCKSQVYIHPTKNLQDNVSGYLLITHQSNSETITSSTISWIP---ENS---LNEEDI 57
Query: 99 NLYT---IRAVPFTEVR---SIRRHTPAFG--------WQYIIVVL---SSGLAFPPLYF 141
N R + +R S R+ G WQ+ I VL S P ++
Sbjct: 58 NFLNNAETRNINEKILRLPVSSRKLNTLLGSGSFLSSNWQFTIPVLSLYSVQFKLPNTWW 117
Query: 142 YTGGV 146
Y +
Sbjct: 118 YGSCI 122
>sp|P48365|GYP7_YEAST GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP7 PE=1 SV=1
Length = 746
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 187/346 (54%), Gaps = 55/346 (15%)
Query: 352 RQPPLGSEEWTTFLD-NEGRV-MDSNALRKRIFYGGVDH-KLRREVWAFLLGYYAYDSTY 408
RQ PL +W + D N+GR+ + N ++ IF+GG+++ LR +VW FLL Y +DS+
Sbjct: 349 RQFPLTEAKWNSLWDENDGRLRVTVNEVKDFIFHGGLENDSLRGKVWGFLLEIYPWDSSQ 408
Query: 409 AEREYLRCIKKSEYENIKRQWQSISPEQARRFTKF---------RERKGLIDKDVVRTDR 459
ER + +EY+ +K W ++ F +F ++ I KDV R DR
Sbjct: 409 DERVQIDQTLAAEYDQLKLTW-------SKDFLQFDDEDEEEYWNDQLFRISKDVRRCDR 461
Query: 460 SVTFF---------------------------------DGDD---NPNVHLLRDILLTYS 483
++ F D DD NP++ L++IL+TY+
Sbjct: 462 NLEIFQYNTIDGLPPPPQQLPANENNSTSPESANDESDDADDGVRNPHLIHLQNILITYN 521
Query: 484 FYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSK 543
YN +LGY QGM+DLLSPI +M++E ++FWCF M+ + NF RDQ+G+H Q+ L +
Sbjct: 522 VYNTNLGYVQGMTDLLSPIYVIMKEEWKTFWCFTHFMDIMERNFLRDQSGIHEQMLTLVE 581
Query: 544 LVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLY 603
LV+L+ L + + D N FFCFR +L+ FKREFE E M +WE WT Y S L+
Sbjct: 582 LVQLMLPELSEHLNKCDSGNLFFCFRMLLVWFKREFEMEDIMHIWENFWTFYYSSQFQLF 641
Query: 604 VCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEAL 649
+AIL++ I+ FD +LKF NEL+G++D + ++ AE L
Sbjct: 642 FMLAILQKNSQAILQHLNQFDQILKFFNELNGKLDWNDLMVRAELL 687
>sp|A1A5B6|TBC25_MOUSE TBC1 domain family member 25 OS=Mus musculus GN=Tbc1d25 PE=1 SV=1
Length = 742
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 144/246 (58%), Gaps = 8/246 (3%)
Query: 350 KPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYA 409
KP +PPL E+ T+L++EG++ LR RI++GGV+ LR+ VW +LL Y T
Sbjct: 247 KPFKPPLSDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGR 306
Query: 410 EREYLRCIKKSEYENIKRQW-QSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDG-D 467
ER K EYE +K +W Q ++PE + + KDV+RTDR+ ++ G +
Sbjct: 307 ERMDYMKRKSREYEQLKSEWAQRVNPEDLEFI------RSTVLKDVLRTDRAHPYYAGPE 360
Query: 468 DNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNF 527
D P++ L D+L TY+ + + YCQGMSDL SPIL VM+ E +F CF +M+RL NF
Sbjct: 361 DGPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANF 420
Query: 528 NRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRL 587
+ D M ++ L L+ D + Y ++ + FFC+RW+L++ KREF ++ +R+
Sbjct: 421 HPDGRAMATKFAHLKLLLRHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRM 480
Query: 588 WEVLWT 593
EV W+
Sbjct: 481 LEVTWS 486
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 602 LYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEAL 649
L++C+AIL +R+ IM +D++ L + L + L +LR A+AL
Sbjct: 673 LFLCLAILLEHRDHIMRNGLDYNELAMHFDRLVRKHHLGRVLRRAKAL 720
>sp|Q3MII6|TBC25_HUMAN TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=2
Length = 688
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 143/246 (58%), Gaps = 8/246 (3%)
Query: 350 KPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYA 409
KP +PPL E+ T+L++EG++ LR RI++GGV+ LR+ VW +LL Y T
Sbjct: 193 KPFKPPLSDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGR 252
Query: 410 EREYLRCIKKSEYENIKRQW-QSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDG-D 467
ER K EYE +K +W Q +PE + + KDV+RTDR+ ++ G +
Sbjct: 253 ERMDYMKRKSREYEQLKSEWAQRANPEDLEFI------RSTVLKDVLRTDRAHPYYAGPE 306
Query: 468 DNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNF 527
D P++ L D+L TY+ + + YCQGMSDL SPIL VM+ E +F CF +M+RL NF
Sbjct: 307 DGPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANF 366
Query: 528 NRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRL 587
+ D M ++ L L+ D + Y ++ + FFC+RW+L++ KREF ++ +R+
Sbjct: 367 HPDGRAMATKFAHLKLLLRHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRM 426
Query: 588 WEVLWT 593
EV W+
Sbjct: 427 LEVTWS 432
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 602 LYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEAL 649
L++C+AIL +R+ IM +D++ L + L + L +LR A AL
Sbjct: 619 LFLCLAILLEHRDHIMRNGLDYNELAMHFDRLVRKHHLGRVLRRARAL 666
>sp|Q80U12|SGSM2_MOUSE Small G protein signaling modulator 2 OS=Mus musculus GN=Sgsm2 PE=2
SV=2
Length = 1005
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 7/203 (3%)
Query: 450 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDE 509
IDKDV R DR+ +F N+ LRDI+ +Y + + D+GY QGM DLL+P+L +++++
Sbjct: 796 IDKDVQRCDRNYWYFT---TSNLERLRDIMCSYVWEHLDMGYVQGMCDLLAPLLVILDND 852
Query: 510 SQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQN-DCLNYFFCF 568
++ CF LM+R+G NF M S + L+++LD+ L QN D +++FC+
Sbjct: 853 QLAYSCFSHLMKRMGQNFPSG-GAMDSHFANMRSLIQILDSELFELMHQNGDYTHFYFCY 911
Query: 569 RWVLIQFKREFEYEKTMRLWEVLWT--HYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTL 626
RW L+ FKRE YE +WEV+W SEH L++ +A+++ YR I MDF +
Sbjct: 912 RWFLLDFKRELLYEDVFAVWEVIWAARRISSEHFVLFIALALVEAYREIIRDNNMDFTDI 971
Query: 627 LKFINELSGRIDLDAILRDAEAL 649
+KF NE + R D ILR A L
Sbjct: 972 IKFFNERAERHDAQEILRIARDL 994
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 351 PRQPP-----LGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYD 405
P +PP L + W+ + +E + LR+ ++YGGV+H++R++VW FLLG+Y +
Sbjct: 528 PDRPPGASGGLTKDVWSKYQKDEKNYKELELLRQ-VYYGGVEHEIRKDVWPFLLGHYKFG 586
Query: 406 STYAEREYLRCIKKSEYENIKRQWQS 431
+ E E + + Y+ + +W++
Sbjct: 587 MSKKEMEQVDTAVAARYQQVLAEWKA 612
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 22 GSSSMMRSDSSKRS---SSSESEGAELVYLKDNVTIHPTQFASERISGRLKLIKQGSSLF 78
GS+S R + R S ++ L+Y K+NV + P + E + G L L + +L
Sbjct: 232 GSASEDRLAACAREYVESLHQNSRTRLLYGKNNVLVQPKE-DMEAVPGYLSLHQSAENLT 290
Query: 79 MTWIPYKGQNSNTRLSEKDRNLYTIRA--VPFTEVRSIRRHTPAFGWQYIIVVLSSGLAF 136
+ W P + N SE ++++Y A VPF+++ I H G +++V G+
Sbjct: 291 LKWTPNQLMNGTLGDSELEKSVYWDYALVVPFSQIVCIHCHQQKSG-GTLVLVSQDGIQR 349
Query: 137 PPLYFYTGG-VREFLATIKQHVL 158
PPL+F GG + FL+ ++ +L
Sbjct: 350 PPLHFPQGGHLLSFLSCLENGLL 372
>sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1
SV=4
Length = 1006
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 7/203 (3%)
Query: 450 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDE 509
IDKDV R DR+ +F PN+ LRD++ +Y + + D+GY QGM DLL+P+L ++++
Sbjct: 797 IDKDVQRCDRNYWYFT---PPNLERLRDVMCSYVWEHLDVGYVQGMCDLLAPLLVTLDND 853
Query: 510 SQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQN-DCLNYFFCF 568
++ CF LM+R+ NF + M + + L+++LD+ L QN D +++FC+
Sbjct: 854 QLAYSCFSHLMKRMSQNFP-NGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCY 912
Query: 569 RWVLIQFKREFEYEKTMRLWEVLWT--HYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTL 626
RW L+ FKRE YE +WEV+W H SEH L++ +A+++ YR I MDF +
Sbjct: 913 RWFLLDFKRELLYEDVFAVWEVIWAARHISSEHFVLFIALALVEAYREIIRDNNMDFTDI 972
Query: 627 LKFINELSGRIDLDAILRDAEAL 649
+KF NE + D ILR A L
Sbjct: 973 IKFFNERAEHHDAQEILRIARDL 995
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 351 PRQPP-----LGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYD 405
P +PP L + W+ + ++ + LR+ ++YGG++H++R++VW FLLG+Y +
Sbjct: 528 PDRPPGASAGLTKDVWSKYQKDKKNYKELELLRQ-VYYGGIEHEIRKDVWPFLLGHYKFG 586
Query: 406 STYAEREYLRCIKKSEYENIKRQWQS 431
+ E E + + + Y+ + +W++
Sbjct: 587 MSKKEMEQVDAVVAARYQQVLAEWKA 612
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 22 GSSSMMRSDSSKRS---SSSESEGAELVYLKDNVTIHPTQFASERISGRLKLIKQGSSLF 78
GS+S R + R S ++ L+Y K++V + P + E + G L L + SL
Sbjct: 232 GSASEDRLAACARECVESLHQNSRTRLLYGKNHVLVQPKE-DMEAVPGYLSLHQSAESLT 290
Query: 79 MTWIPYKGQNSNTRLSEKDRNLYTIRA--VPFTEVRSIRRHTPAFGWQYIIVVLSSGLAF 136
+ W P + N SE ++++Y A VPF++V I H G +++V G+
Sbjct: 291 LKWTPNQLMNGTLGDSELEKSVYWDYALVVPFSQVVCIHCHQQKSG-GTLVLVSQDGIQR 349
Query: 137 PPLYFYTGG-VREFLATIKQHVL 158
PPL+F GG + FL+ ++ +L
Sbjct: 350 PPLHFPQGGHLLSFLSCLENGLL 372
>sp|Q8BPQ7|SGSM1_MOUSE Small G protein signaling modulator 1 OS=Mus musculus GN=Sgsm1 PE=2
SV=2
Length = 1093
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 122/203 (60%), Gaps = 7/203 (3%)
Query: 450 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDE 509
I+KDV R DRS +F N+ LR+I+ +Y + + ++GY QGM DLL+P+L +++DE
Sbjct: 884 IEKDVQRCDRSYWYFTA---ANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDE 940
Query: 510 SQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQN-DCLNYFFCF 568
+ +F CF LM+R+ NF M + + L+++LD+ L QN D +++FC+
Sbjct: 941 ALAFSCFTELMKRMNQNFPHG-GAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCY 999
Query: 569 RWVLIQFKREFEYEKTMRLWEVLWT--HYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTL 626
RW L+ FKRE Y+ +WE +W H S H L++ +A+++ YR+ I+ MDF +
Sbjct: 1000 RWFLLDFKRELVYDDVFSVWETIWAAKHVSSAHYVLFIALALVEVYRDIILENNMDFTDI 1059
Query: 627 LKFINELSGRIDLDAILRDAEAL 649
+KF NE++ R + IL+ A L
Sbjct: 1060 IKFFNEMAERHNAKQILQLARDL 1082
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 361 WTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKS 420
W ++ + + LR I+YGGV ++RR VW FLLG+Y + T ER+ + +
Sbjct: 539 WEKYIQDSTTYPEQELLR-LIYYGGVQPEIRRAVWPFLLGHYQFGMTEMERKEVDEQIHA 597
Query: 421 EYENIKRQW 429
Y +W
Sbjct: 598 CYAQTMSEW 606
>sp|Q2NKQ1|SGSM1_HUMAN Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1
SV=2
Length = 1148
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 128/220 (58%), Gaps = 10/220 (4%)
Query: 433 SPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYC 492
SPE +T R I+KDV R DR+ +F N+ LR+I+ +Y + + ++GY
Sbjct: 925 SPELLDLYTVNLHR---IEKDVQRCDRNYWYFTP---ANLEKLRNIMCSYIWQHIEIGYV 978
Query: 493 QGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPL 552
QGM DLL+P+L +++DE+ +F CF LM+R+ NF M + + L+++LD+ L
Sbjct: 979 QGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFPHG-GAMDTHFANMRSLIQILDSEL 1037
Query: 553 HNYFKQN-DCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWT--HYLSEHLHLYVCVAIL 609
QN D +++FC+RW L+ FKRE Y+ +WE +W H S H L++ +A++
Sbjct: 1038 FELMHQNGDYTHFYFCYRWFLLDFKRELVYDDVFLVWETIWAAKHVSSAHYVLFIALALV 1097
Query: 610 KRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEAL 649
+ YR+ I+ MDF ++KF NE++ R + +L+ A L
Sbjct: 1098 EVYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLARDL 1137
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 361 WTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKS 420
W +L + + LR I+YGG+ ++R+ VW FLLG+Y + T ER+ + +
Sbjct: 594 WEQYLHDSTSYEEQELLR-LIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHA 652
Query: 421 EYENIKRQW 429
Y +W
Sbjct: 653 CYAQTMAEW 661
>sp|Q95LL3|TB22B_MACFA TBC1 domain family member 22B OS=Macaca fascicularis GN=TBC1D22B
PE=2 SV=1
Length = 505
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 373 DSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSI 432
D + LRK + GV ++R W L GY ++ + R K+ EY Q+
Sbjct: 199 DLDELRK-CSWPGVPREVRPVTWRLLSGYLPANTERRKLTLQR--KREEYFGFIEQYYDS 255
Query: 433 SPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVH-LLRDILLTYSFYNFDLGY 491
E+ + T +R+ I D+ RT+ + F P V + IL ++ + GY
Sbjct: 256 RNEEHHQDT-YRQ----IHIDIPRTNPLIPLFQ---QPLVQEIFERILFIWAIRHPASGY 307
Query: 492 CQGMSDLLSPIL------FVMED-----------------ESQSFWCFVALMERLGPNFN 528
QG++DL++P +V ED E+ SFWC L++ + N+
Sbjct: 308 VQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDMLRSIEADSFWCMSKLLDGIQDNYT 367
Query: 529 RDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLW 588
Q G+ ++ AL +LV +D +HN+F++ + F FRW+ RE T+RLW
Sbjct: 368 FAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNLLMRELPLRCTIRLW 427
Query: 589 EVLWTHYLSE-----HLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINEL 633
+ Y SE H HLYVC A L ++R +I+ E+ DF LL + L
Sbjct: 428 DT----YQSEPEGFSHFHLYVCAAFLIKWRKEILDEE-DFQGLLMLLQNL 472
>sp|Q9NU19|TB22B_HUMAN TBC1 domain family member 22B OS=Homo sapiens GN=TBC1D22B PE=1 SV=3
Length = 505
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 373 DSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSI 432
D + LRK + GV ++R W L GY ++ R+ K+ EY Q+
Sbjct: 199 DLDELRK-CSWPGVPREVRPITWRLLSGYLPANT--ERRKLTLQRKREEYFGFIEQYYDS 255
Query: 433 SPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVH-LLRDILLTYSFYNFDLGY 491
E+ + T +R+ I D+ RT+ + F P V + IL ++ + GY
Sbjct: 256 RNEEHHQDT-YRQ----IHIDIPRTNPLIPLFQ---QPLVQEIFERILFIWAIRHPASGY 307
Query: 492 CQGMSDLLSPIL------FVMED-----------------ESQSFWCFVALMERLGPNFN 528
QG++DL++P +V ED E+ SFWC L++ + N+
Sbjct: 308 VQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDMLRSIEADSFWCMSKLLDGIQDNYT 367
Query: 529 RDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLW 588
Q G+ ++ AL +LV +D +HN+F++ + F FRW+ RE T+RLW
Sbjct: 368 FAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNLLMRELPLRCTIRLW 427
Query: 589 EVLWTHYLSE-----HLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINEL 633
+ Y SE H HLYVC A L ++R +I+ E+ DF LL + L
Sbjct: 428 DT----YQSEPEGFSHFHLYVCAAFLIKWRKEILDEE-DFQGLLMLLQNL 472
>sp|Q8IYX1|TBC21_HUMAN TBC1 domain family member 21 OS=Homo sapiens GN=TBC1D21 PE=2 SV=1
Length = 336
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 17/317 (5%)
Query: 352 RQPPLGSEEWTTFLDNEGRVMDS-NALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAE 410
R+PP+ EW +F D G + S + + I G+ +R E W FL GY+++ S+ E
Sbjct: 23 RKPPIDKTEWDSFFDESGHLAKSRDFICVNILERGLHPFVRTEAWKFLTGYFSWQSSQDE 82
Query: 411 REYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNP 470
R + +++ Y+ + + ++ I P F E + I +D+ + +D D
Sbjct: 83 RLTVDSMRRKNYKALCQMYEKIQPLLENLHRNFTETRNNIARDIQKI------YDKDPLG 136
Query: 471 NVHL----LRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPN 526
NV + L ILL N Y QG +++ ++E + ++FW F +++ +
Sbjct: 137 NVLIDKKRLEKILLLSYVCNTQAEYQQGFHEMMMLFQLMVEHDHETFWLFQFFLQKTEHS 196
Query: 527 FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFE-YEKTM 585
+ G+ L LS L+ LD + K F W F+R F+ ++
Sbjct: 197 CVIN-IGVAKNLDMLSTLITFLDPVFAEHLKGKGAGAVQSLFPWFCFCFQRAFKSFDDVW 255
Query: 586 RLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRD 645
RLWEVL T + + V ++L+ R +++ E M D +L N L IDLDA
Sbjct: 256 RLWEVLLTGKPCRNFQVLVAYSMLQMVREQVLQESMGGDDILLACNNL---IDLDAD-EL 311
Query: 646 AEALCICAGENGAASIP 662
A C+ E +P
Sbjct: 312 ISAACVVYAELIQKDVP 328
>sp|O59737|GYP1_SCHPO GTPase-activating protein gyp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp1 PE=3 SV=1
Length = 514
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 52/315 (16%)
Query: 368 EGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKR 427
+ ++D NALR + + G+ + R VW +LLGY +++ RE K+ EY K
Sbjct: 200 DAPIVDLNALRT-LAWNGIPSEHRPIVWKYLLGYLPCNAS--RREVTLKRKRDEYNAAKD 256
Query: 428 QWQSISPEQAR-RFTKFRERKGLIDKDVVRTDRSVTFFDGDDNP-NVHLLRDILLTYSFY 485
+ + E T +R+ I DV RT+ S+ + NP +L IL ++
Sbjct: 257 SCFNTNTEPPPLDQTIWRQ----IVLDVPRTNPSILLYQ---NPLTQRMLERILYVWASR 309
Query: 486 NFDLGYCQGMSDLLSPILFVM------------------------EDESQSFWCFVALME 521
+ GY QG+SDL++P + V + E+ ++WC L++
Sbjct: 310 HPASGYVQGISDLVTPFIQVFLSEYIGDKDPMTYDIALLDETNRNDIEADAYWCLSKLLD 369
Query: 522 RLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEY 581
+ N+ Q G+ Q+ L +L +D PL + + F FRW+ RE
Sbjct: 370 GIQDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEGVDFLQFSFRWMNCLLMRELSI 429
Query: 582 EKTMRLWEVLWTHYLSE------HLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSG 635
+R+W+ Y++E HLYVC A L ++ +++ ++M+F +L F+ +
Sbjct: 430 SNIIRMWDT----YMAEGVQGFSEFHLYVCAAFLVKWSSEL--QKMEFQDILIFLQSIPT 483
Query: 636 R----IDLDAILRDA 646
+ D++ +L +A
Sbjct: 484 KDWSTKDIEILLSEA 498
>sp|Q8WUA7|TB22A_HUMAN TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2
Length = 517
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 46/285 (16%)
Query: 379 KRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQAR 438
+R+ + G+ +R W L GY + R K+ EY + ++
Sbjct: 216 RRLSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQR--KQKEYFAFIEHYYDSRNDEVH 273
Query: 439 RFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNV-HLLRDILLTYSFYNFDLGYCQGMSD 497
+ T +R+ I D+ R P V + IL ++ + GY QG++D
Sbjct: 274 QDT-YRQ----IHIDIPRMSPEALIL----QPKVTEIFERILFIWAIRHPASGYVQGIND 324
Query: 498 LLSP--ILFVME----------------------DESQSFWCFVALMERLGPNFNRDQNG 533
L++P ++F+ E E+ ++WC L++ + N+ Q G
Sbjct: 325 LVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMSKLLDGIQDNYTFAQPG 384
Query: 534 MHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWT 593
+ ++ L +LV +D +H + Q++ F FRW+ RE T+RLW+
Sbjct: 385 IQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIRLWDT--- 441
Query: 594 HYLSE-----HLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINEL 633
Y SE H HLYVC A L R+R +I+ E+ DF LL F+ L
Sbjct: 442 -YQSEPDGFSHFHLYVCAAFLVRWRKEIL-EEKDFQELLLFLQNL 484
>sp|Q95KI1|TB22A_MACFA TBC1 domain family member 22A (Fragment) OS=Macaca fascicularis
GN=TBC1D22A PE=2 SV=2
Length = 497
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 47/295 (15%)
Query: 369 GRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQ 428
G D LRK + + G+ +R W L GY + R K+ EY
Sbjct: 187 GPNTDLEELRK-LSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQR--KQKEYFAFIEH 243
Query: 429 WQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNV-HLLRDILLTYSFYNF 487
+ ++ + T +R+ I D+ R P V + IL ++ +
Sbjct: 244 YYDSRNDEVHQDT-YRQ----IHIDIPRMSPEALIL----QPKVTEIFERILFIWAIRHP 294
Query: 488 DLGYCQGMSDLLSP--ILFVME----------------------DESQSFWCFVALMERL 523
GY QG++DL++P ++F+ E E+ ++WC L++ +
Sbjct: 295 ASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLRNIEADTYWCMSKLLDGI 354
Query: 524 GPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEK 583
N+ Q G+ ++ L +LV +D +H + Q++ F FRW+ RE
Sbjct: 355 QDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRC 414
Query: 584 TMRLWEVLWTHYLSE-----HLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINEL 633
T+RLW+ Y SE H HLYVC A L R+R +I+ E+ DF LL F+ L
Sbjct: 415 TIRLWDT----YQSEPEGFSHFHLYVCAAFLVRWRKEIL-EEKDFQELLLFLQNL 464
>sp|Q8R5A6|TB22A_MOUSE TBC1 domain family member 22A OS=Mus musculus GN=Tbc1d22a PE=2 SV=3
Length = 516
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 47/295 (15%)
Query: 369 GRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQ 428
G D LRK + + G+ +R W L GY + R K+ EY
Sbjct: 206 GPNTDLEELRK-LSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQR--KQKEYFAFIEH 262
Query: 429 WQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNV-HLLRDILLTYSFYNF 487
+ S ++ + T +R+ I D+ R P V + IL ++ +
Sbjct: 263 YYSSRNDEVHQDT-YRQ----IHIDIPRMSPEALIL----QPKVTEIFERILFIWAIRHP 313
Query: 488 DLGYCQGMSDLLSP--ILFVME----------------------DESQSFWCFVALMERL 523
GY QG++DL++P ++F+ E E+ ++WC L++ +
Sbjct: 314 ASGYVQGINDLVTPFFVVFICEYTDREDVDKVDVSSVPAEVLRNIEADTYWCMSKLLDGI 373
Query: 524 GPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEK 583
N+ Q G+ ++ L +LV +D +H + ++ F FRW+ RE
Sbjct: 374 QDNYTFAQPGIQMKVKMLEELVSRIDERVHRHLDGHEVRYLQFAFRWMNNLLMRELPLRC 433
Query: 584 TMRLWEVLWTHYLSE-----HLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINEL 633
T+RLW+ Y SE H HLYVC A L R+R +I+ E+ DF LL F+ L
Sbjct: 434 TIRLWDT----YQSEPEGFSHFHLYVCAAFLVRWRREIL-EERDFQELLLFLQNL 483
>sp|Q08484|GYP1_YEAST GTPase-activating protein GYP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP1 PE=1 SV=1
Length = 637
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 44/249 (17%)
Query: 379 KRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQAR 438
++I + G+ R VW L+GY ++ E R K+ EY + + + S + +R
Sbjct: 274 RQISWNGIPKIHRPVVWKLLIGYLPVNTKRQEGFLQR--KRKEYRDSLKH--TFSDQHSR 329
Query: 439 RFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDL 498
+ + I+ D+ RT+ + + N L+ IL ++ + GY QG++DL
Sbjct: 330 DIPTWHQ----IEIDIPRTNPHIPLYQFKSVQNS--LQRILYLWAIRHPASGYVQGINDL 383
Query: 499 LSPIL--FVMED--------------------------ESQSFWCFVALMERLGPNFNRD 530
++P F+ E E+ +FWC L+E++ N+
Sbjct: 384 VTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQITDNYIHG 443
Query: 531 QNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYF-FCFRWVLIQFKREFEYEKTMRLWE 589
Q G+ Q+ LS+LV+ +D L+N+F QN+ + + F FRW+ REF+ +R+W+
Sbjct: 444 QPGILRQVKNLSQLVKRIDADLYNHF-QNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWD 502
Query: 590 VLWTHYLSE 598
YLSE
Sbjct: 503 T----YLSE 507
>sp|Q80XC3|US6NL_MOUSE USP6 N-terminal-like protein OS=Mus musculus GN=Usp6nl PE=1 SV=2
Length = 819
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 121/286 (42%), Gaps = 45/286 (15%)
Query: 358 SEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCI 417
+ +W L R ++ +RI Y G+ +LR EVWA LL E ++
Sbjct: 74 TSKWLKMLKKWERYKNTEKFHRRI-YKGIPLQLRGEVWALLL----------EIPKMKEE 122
Query: 418 KKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRD 477
+ Y +K + + SP+ R+ ID DV RT R F L
Sbjct: 123 TRDLYSKLKHRARGCSPD-------IRQ----IDLDVNRTFRDHIMFRDRYGVKQQSLFH 171
Query: 478 ILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHS- 536
+L YS YN ++GYCQGMS + + +L M +E +FW V L F+ ++ MH
Sbjct: 172 VLAAYSIYNTEVGYCQGMSQITALLLMYMNEED-AFWALVKL-------FSGPKHAMHGF 223
Query: 537 ------QLFALSKLVELLDNPLHNYFKQN----DCLNYFFCFRWVLIQFKREFEYEKTMR 586
+L + E + N + KQ+ + F+ +W F + +R
Sbjct: 224 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFRLNLR 283
Query: 587 LWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINE 632
+W++ + E + + ILK ++ +M ++ + L++F+ E
Sbjct: 284 IWDIYI--FEGERVLTAMSYTILKLHKKHLM--KLSMEELVEFLQE 325
>sp|Q92738|US6NL_HUMAN USP6 N-terminal-like protein OS=Homo sapiens GN=USP6NL PE=1 SV=3
Length = 828
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 45/284 (15%)
Query: 360 EWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKK 419
+W L + ++ +RI Y G+ +LR EVWA LL E ++ +
Sbjct: 76 KWLKMLKGWEKYKNTEKFHRRI-YKGIPLQLRGEVWALLL----------EIPKMKEETR 124
Query: 420 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDIL 479
Y +K + + SP+ R+ ID DV RT R F L +L
Sbjct: 125 DLYSKLKHRARGCSPD-------IRQ----IDLDVNRTFRDHIMFRDRYGVKQQSLFHVL 173
Query: 480 LTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHS--- 536
YS YN ++GYCQGMS + + +L M +E +FW V L F+ ++ MH
Sbjct: 174 AAYSIYNTEVGYCQGMSQITALLLMYMNEED-AFWALVKL-------FSGPKHAMHGFFV 225
Query: 537 ----QLFALSKLVELLDNPLHNYFKQN----DCLNYFFCFRWVLIQFKREFEYEKTMRLW 588
+L + E + N + KQ+ + F+ +W F + +R+W
Sbjct: 226 QGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIW 285
Query: 589 EVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINE 632
++ + E + + ILK ++ +M ++ + L++F E
Sbjct: 286 DIYI--FEGERVLTAMSYTILKLHKKHLM--KLSMEELVEFFQE 325
>sp|Q9VYY9|Y1727_DROME TBC1 domain family member CG11727 OS=Drosophila melanogaster
GN=CG11727 PE=1 SV=3
Length = 807
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 361 WTTFLDN-EGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDST-YAEREYLRCIK 418
W T L++ EG + N + G+ H R VW L G D YAE Y++
Sbjct: 91 WATILNDWEGALKRKNPCVSELVRRGIPHHFRAIVWQQLSGASDGDKKQYAE--YIKATS 148
Query: 419 KSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDI 478
E +I +D+ RT V FF D P L ++
Sbjct: 149 ACE--------------------------KVIRRDIARTYPEVEFFKEKDGPGQEALFNV 182
Query: 479 LLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALME--RLGPNFNRDQNGMHS 536
+ YS ++ ++GYCQG S + +L + E ++F V +M+ R+ F + +
Sbjct: 183 IKAYSLHDREVGYCQG-SGFIVGLLLMQMPEEEAFAVLVQIMQQHRMRHMFKPSMSELGL 241
Query: 537 QLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYL 596
++ L LV+ +H +F+Q + W L + + R+ +V +L
Sbjct: 242 CMYQLENLVQEQIPDMHIHFQQQGFQTTMYASSWFLTLYTTTLNVNLSCRIMDV----FL 297
Query: 597 SEHLHLY--VCVAILKRYRNKIMGEQMDFDTLLKFIN-ELSGRIDLD 640
SE + V +A+L ++ ++ +D + +LKF EL GR++ D
Sbjct: 298 SEGMEFIFKVALALLLTGKDTLLC--LDMEAMLKFFQKELPGRVEAD 342
>sp|Q5ZJ17|RBG1L_CHICK Rab GTPase-activating protein 1-like OS=Gallus gallus GN=RABGAP1L
PE=2 SV=1
Length = 816
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 32/247 (12%)
Query: 385 GVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFR 444
GV LR EVW L G + ++ + L + ++ EN+
Sbjct: 539 GVPEALRAEVWQLLAGCHDNEAMLDKYRILITMDSAQ-ENV------------------- 578
Query: 445 ERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILF 504
I +D+ RT + +F + L I YS Y+ D+GYCQG S L+ +L
Sbjct: 579 -----ITRDIHRTFPAHDYFKDTEGDGQESLYKICKAYSVYDEDIGYCQGQS-FLAAVLL 632
Query: 505 VMEDESQSFWCFVALMERLGPN--FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCL 562
+ E Q+F FV +M G + + +H + F L KL++ L+++F +
Sbjct: 633 LHMPEEQAFCVFVKIMYDYGLRDLYRNNFEDLHCKFFQLEKLMQEQLPDLYSHFSDLNLE 692
Query: 563 NYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMD 622
+ + +W L F +F + ++L ++ H V +A+LK + ++ Q D
Sbjct: 693 AHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGMNIIFH--VALALLKTSKEDLL--QAD 748
Query: 623 FDTLLKF 629
F+ LKF
Sbjct: 749 FEGALKF 755
>sp|Q5RCW6|RBG1L_PONAB Rab GTPase-activating protein 1-like OS=Pongo abelii GN=RABGAP1L
PE=2 SV=1
Length = 815
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 32/247 (12%)
Query: 385 GVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFR 444
GV LR EVW L G +D+ Y I TK
Sbjct: 538 GVPEALRAEVWQLLAG--CHDNQAMLDRYRILI-----------------------TKDS 572
Query: 445 ERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILF 504
++ +I +D+ RT + +F L I YS Y+ D+GYCQG S L+ +L
Sbjct: 573 AQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQS-FLAAVLL 631
Query: 505 VMEDESQSFWCFVALMERLGPN--FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCL 562
+ E Q+F V +M G + + +H + + L +L++ LH++F +
Sbjct: 632 LHMPEEQAFCVLVKIMYDYGLRDLYKNNFEDLHCKFYQLERLMQEQLPDLHSHFSDLNLE 691
Query: 563 NYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMD 622
+ + +W L F +F + ++L L+ H V +A+LK + ++ Q D
Sbjct: 692 AHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFH--VALALLKTSKEDLL--QAD 747
Query: 623 FDTLLKF 629
F+ LKF
Sbjct: 748 FEGALKF 754
>sp|Q5R372|RBG1L_HUMAN Rab GTPase-activating protein 1-like OS=Homo sapiens GN=RABGAP1L
PE=1 SV=1
Length = 815
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 32/247 (12%)
Query: 385 GVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFR 444
GV LR EVW L G +D+ Y I TK
Sbjct: 538 GVPEALRAEVWQLLAG--CHDNQAMLDRYRILI-----------------------TKDS 572
Query: 445 ERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILF 504
++ +I +D+ RT + +F L I YS Y+ D+GYCQG S L+ +L
Sbjct: 573 AQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQS-FLAAVLL 631
Query: 505 VMEDESQSFWCFVALMERLGPN--FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCL 562
+ E Q+F V +M G + + +H + + L +L++ LH++F +
Sbjct: 632 LHMPEEQAFCVLVKIMYDYGLRDLYRNNFEDLHCKFYQLERLMQEQLPDLHSHFSDLNLE 691
Query: 563 NYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMD 622
+ + +W L F +F + ++L L+ H V +A+LK + ++ Q D
Sbjct: 692 AHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFH--VALALLKTSKEDLL--QAD 747
Query: 623 FDTLLKF 629
F+ LKF
Sbjct: 748 FEGALKF 754
>sp|Q4QQU7|GRTP1_RAT Growth hormone-regulated TBC protein 1 OS=Rattus norvegicus
GN=Grtp1 PE=2 SV=1
Length = 289
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 7/203 (3%)
Query: 420 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRS----VTFFDGDDNPNVHLL 475
+ YE + I ++A +++K + G + K V +R+ V F D L
Sbjct: 31 AAYEEFFSTYLVILTKRAIKWSKLLKGSGGVRKSVTDLNRTFPDNVMFRKTADPCLQKTL 90
Query: 476 RDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPN-FNRDQNGM 534
++LL Y +N D+GYCQGM+ + ++ + ++E +SFW AL+ R+ P+ ++ G+
Sbjct: 91 YNVLLAYGLHNQDVGYCQGMNFIAGYLILITKNEEESFWLLDALVGRILPDYYSPAMLGL 150
Query: 535 HSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTH 594
+ L++LV + + + L RW + F E +R+W+ L+
Sbjct: 151 KTDQEVLAELVRMKLPAVAALMDGHGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNE 210
Query: 595 YLSEHLHLYVCVAILKRYRNKIM 617
+ V + ++K+++ I+
Sbjct: 211 --GSKIIFRVALTLIKQHQEFIL 231
>sp|Q12344|GYP5_YEAST GTPase-activating protein GYP5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP5 PE=1 SV=1
Length = 894
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 429 WQSISPEQARRFTKFRERKGLIDKD-----VVRTDRSVTFFDGDDNPNVHLLRDILLTYS 483
WQ ++ ++R E L+D + +R D T F +D + L ++ YS
Sbjct: 461 WQLMANSKSREMEDIYE--TLLDTECLHEATIRRDLRRTKFVAEDK--MESLYKVIKVYS 516
Query: 484 FYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPN--FNRDQNGMHSQLFAL 541
Y+ D+GY QGM + +P+L E+E++SF V LM+ G F G+ L+
Sbjct: 517 VYDPDVGYTQGMGFIAAPLLINCENEAESFGLLVGLMKNYGLRELFLPGMPGLMLMLYQF 576
Query: 542 SKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLH 601
+L+E L+N + + + +W L F +F E +R++++++ E +
Sbjct: 577 DRLLEEHSPSLYNRLIREGISSTMYATQWFLTFFAYKFPLEFVLRIFDIVFV----EGIE 632
Query: 602 LYVCVAILKRYRNKIMGEQMDFDTLLKFI 630
+ + A+ +N+ ++ FD LL F+
Sbjct: 633 VLLKFAVNLMLKNEETLVKLRFDELLDFL 661
>sp|Q755I4|GYP5_ASHGO GTPase-activating protein GYP5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GYP5
PE=3 SV=2
Length = 829
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 429 WQSISPEQARRFTKF--------RERKGLIDKDVVRT-----DRSVTFFDGDDNPNVHLL 475
WQ IS +++ + E + I +D+ RT D++ + F+
Sbjct: 381 WQLISNSKSKEIRQLYQDLLQIPSEHEKAIQRDISRTKFIPVDKTESLFN---------- 430
Query: 476 RDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPN--FNRDQNG 533
+L YS ++ ++GY QGM+ + +P+L + +E+ +F + LM+ G F D G
Sbjct: 431 --VLKAYSLFDPEVGYTQGMAFVTAPLLINVWEEADAFGLLIKLMKNYGLREFFLPDMPG 488
Query: 534 MHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWT 593
+ +L+ +L+E L+N+ + + + +W L F +F +R+ +V++
Sbjct: 489 LQLKLYEFDRLLEENSPQLYNHLIRLGIRSSMYATQWFLTLFAYKFPLGFVLRILDVIFV 548
Query: 594 HYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINE 632
+ E L + + +LK N+ + Q+ FD LL F+ +
Sbjct: 549 EGI-ESLLKFAVILMLK---NESVLVQLKFDKLLDFLKD 583
>sp|A6H6A9|RBG1L_MOUSE Rab GTPase-activating protein 1-like OS=Mus musculus GN=Rabgap1l
PE=1 SV=1
Length = 815
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 32/247 (12%)
Query: 385 GVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFR 444
GV LR EVW L G +D+ +Y I TK
Sbjct: 538 GVPEALRAEVWQLLAG--CHDNQEMLDKYRILI-----------------------TKDS 572
Query: 445 ERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILF 504
++ +I +D+ RT + +F L I YS ++ D+GYCQG S L+ +L
Sbjct: 573 AQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVFDEDIGYCQGQS-FLAAVLL 631
Query: 505 VMEDESQSFWCFVALM--ERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCL 562
+ E Q+F V +M +L + + +H + + L KL++ L+++F +
Sbjct: 632 LHMPEEQAFCVLVTIMYGYKLRDLYRNNFEDLHCKFYQLEKLMQEQLPDLYSHFCDLNLE 691
Query: 563 NYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMD 622
+ + +W L F +F + ++L L+ H V +A+LK + ++ Q D
Sbjct: 692 AHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFH--VALALLKTSKEDLL--QAD 747
Query: 623 FDTLLKF 629
F+ LKF
Sbjct: 748 FEGALKF 754
>sp|A6QP29|TBD2A_BOVIN TBC1 domain family member 2A OS=Bos taurus GN=TBC1D2 PE=2 SV=1
Length = 925
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 56/306 (18%)
Query: 322 HDEEAVTNVGTFELIDCKEFDKLT--------LVWGKPRQPPLGSEEWTTFLDNEGRVMD 373
+DE V +E+ D + K+ L+ + + PL E W T G +
Sbjct: 557 YDEYGFLTVPNYEVEDLRLLAKIQALEVHSHHLLAHEAVERPL-RERWATL----GELAP 611
Query: 374 SNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS 433
S L K++ GV H+ R VW +L+ ++L+ Y+ + + Q+
Sbjct: 612 SAEL-KQLLRAGVPHEHRPRVWRWLIRLRV--------QHLQA--PGCYQALLSRGQACK 660
Query: 434 PEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 493
AR+ I+ D+ RT + F + LR +LL +S+ N +GYCQ
Sbjct: 661 HSAARQ----------IELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQ 710
Query: 494 GMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHSQL-------FALSKLVE 546
G++ L + L V+++E +FWC VA++E + P + + SQ+ L KL
Sbjct: 711 GLNRLAAIALLVLDEEESAFWCLVAIVETIMPADYYSKTLLASQVDQRVLQDLLLEKLPR 770
Query: 547 LLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCV 606
L+ + Q F F W L+ F +++W+ LY +
Sbjct: 771 LM-----AHLGQRHVDLSFITFNWFLVVFADSLISNILLQVWDAF----------LYEGI 815
Query: 607 AILKRY 612
++ RY
Sbjct: 816 KVVFRY 821
>sp|Q6GLZ0|GRTP1_XENLA Growth hormone-regulated TBC protein 1 OS=Xenopus laevis GN=grtp1
PE=2 SV=1
Length = 342
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 453 DVVRTDRSVTF-----FDGDDNPNVHL-LRDILLTYSFYNFDLGYCQGMSDLLSPILFVM 506
D+V TD + TF F + NP++ L ++L+ Y +N +GYCQGM+ + ++ V
Sbjct: 114 DLVNTDLNRTFPDNVQFRKNSNPSLQKHLYNVLVAYGQHNTTVGYCQGMNFIAGYLILVT 173
Query: 507 EDESQSFWCFVALMERLGPN-FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYF 565
+DE ++FW AL+ R+ P+ ++ G+ + L LV+ + + + +
Sbjct: 174 KDEEKAFWLMDALIGRILPDYYSPAMTGLKTDQEVLGDLVKKKLPAVSQLIEAHGVMWTL 233
Query: 566 FCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIM 617
RW + F E +R+W+ L+ + + V + ++K+Y+ I+
Sbjct: 234 LVSRWFICLFIDILPVETVLRIWDCLF--FEGSKVLFRVALTLIKQYQAFIL 283
>sp|B1AVH7|TBD2A_MOUSE TBC1 domain family member 2A OS=Mus musculus GN=Tbc1d2 PE=2 SV=1
Length = 922
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 450 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDE 509
I+ D+ RT + F + LR +LL +S+ N +GYCQG++ L + L V+EDE
Sbjct: 664 IELDLNRTFPTNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEDE 723
Query: 510 SQSFWCFVALMERLGPNFNRDQNGMHSQL--FALSKLVELLDNPLHNYFKQNDCLNYFFC 567
+FWC VA++E + P + SQ+ L L+ L + Q+
Sbjct: 724 ESAFWCLVAIVETILPAEYYSKTLTASQVDQRVLQDLLSEKLPRLTAHLGQHRVDLSLIT 783
Query: 568 FRWVLIQFKREFEYEKTMRLWEV 590
F W L+ F + +R+W+
Sbjct: 784 FNWFLVVFADSLISDILLRVWDA 806
>sp|D2H0G5|TBD2A_AILME TBC1 domain family member 2A OS=Ailuropoda melanoleuca GN=TBC1D2
PE=3 SV=1
Length = 923
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Query: 450 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDE 509
I+ D+ RT + F + LR +LL +S+ N +GYCQG++ L + L V+E+E
Sbjct: 676 IELDLNRTFPNNKHFTCPTSTFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEE 735
Query: 510 SQSFWCFVALMERLGPNFNRDQNGMHSQL-------FALSKLVELLDNPLHNYFKQNDCL 562
+FWC VA++E + P + SQ+ L KL L+ + Q
Sbjct: 736 ESAFWCLVAIVETIMPADYYSKTLTSSQVDQRVLQDLLLEKLPRLM-----AHLGQYRVD 790
Query: 563 NYFFCFRWVLIQFKREFEYEKTMRLWEV 590
F F W L+ F +R+W+
Sbjct: 791 LSFLTFNWFLVVFADSLISNILLRVWDA 818
>sp|Q6PBU5|GRT1A_DANRE Growth hormone-regulated TBC protein 1-A OS=Danio rerio GN=grtp1a
PE=2 SV=1
Length = 356
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 4/182 (2%)
Query: 450 IDKDVVRTDRSVTFFDGDDNPNVH-LLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMED 508
I D+ RT +F P + L ++L+ Y +N +GYCQGM+ + ++ V +D
Sbjct: 130 IRTDLHRTFPDNIYFRKSAEPCLQQALYNVLVAYGHHNKAVGYCQGMNFIAGYLILVSKD 189
Query: 509 ESQSFWCFVALMERLGPN-FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFC 567
E SFW AL+ R+ P+ + G+ + L +LV L + + +
Sbjct: 190 EETSFWLMEALLSRILPDYYTPAMLGLKTDQEVLGELVRLKAPAVWKLMQDQGVMWTLVV 249
Query: 568 FRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLL 627
RW + F E +R+W+ L+ Y + V + +++ ++ +I Q D
Sbjct: 250 SRWFICLFIDVLPVETVLRIWDCLF--YEGSKILFRVALTLIRHHQQEIAEAQNLPDVCE 307
Query: 628 KF 629
+F
Sbjct: 308 RF 309
>sp|B5DFA1|TBD2A_RAT TBC1 domain family member 2A OS=Rattus norvegicus GN=Tbc1d2 PE=2
SV=1
Length = 924
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 450 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDE 509
I+ D+ RT + F + LR +LL +S+ N +GYCQG++ L + L V+EDE
Sbjct: 666 IELDLNRTFPTNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEDE 725
Query: 510 SQSFWCFVALMERLGPNFNRDQNGMHSQL--FALSKLVELLDNPLHNYFKQNDCLNYFFC 567
+FWC VA++E + P + SQ+ L L+ L + Q
Sbjct: 726 ESAFWCLVAIVETILPAEYYSKTLTASQVDQRVLQDLLSEKLPRLTAHLGQRHVDLSLIT 785
Query: 568 FRWVLIQFKREFEYEKTMRLWEV 590
F W L+ F + +R+W+
Sbjct: 786 FNWFLVIFADSLISDILLRVWDA 808
>sp|Q6GL87|GRTP1_XENTR Growth hormone-regulated TBC protein 1 OS=Xenopus tropicalis
GN=grtp1 PE=2 SV=1
Length = 342
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 429 WQSISPEQA----------RRFTKFRERKGLIDKDVVRTDRSVTF-----FDGDDNPNVH 473
W +S QA R FT+ + L+D +V TD + TF F + NP++
Sbjct: 82 WMVVSGAQAQMDMNTGYFRRMFTEGEKNPKLLD--LVITDLNRTFPDNVLFQKNANPSLQ 139
Query: 474 L-LRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPN-FNRDQ 531
L ++L+ Y +N +GYCQGM+ + ++ V +DE ++FW AL+ ++ P+ ++
Sbjct: 140 KDLYNVLVAYGQHNKTVGYCQGMNFIAGYLILVTKDEEKAFWLMDALIGQILPDYYSPAM 199
Query: 532 NGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVL 591
G+ + L LV+ + + + + RW + F E +R+W+ L
Sbjct: 200 TGLKTDQEVLGDLVKKKIPSVAQLIETHGVMWTLLVSRWFICLFIDILPVETVLRIWDCL 259
Query: 592 WTHYLSEHLHLYVCVAILKRYRNKIM 617
+ + + V + ++K+ + IM
Sbjct: 260 F--FEGSKVIFRVALTLIKQSQASIM 283
>sp|Q5TC63|GRTP1_HUMAN Growth hormone-regulated TBC protein 1 OS=Homo sapiens GN=GRTP1
PE=1 SV=4
Length = 336
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 19/242 (7%)
Query: 391 RREV-WAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGL 449
RR + W+ LL + + Y+R K E+ R W +S QA+ L
Sbjct: 41 RRAIKWSRLLQGGGVPRSRTVKRYVR--KGVPLEHRARVWMVLSGAQAQMDQNPGYYHQL 98
Query: 450 ID-------KDVVRTDRSVTF-----FDGDDNPNVH-LLRDILLTYSFYNFDLGYCQGMS 496
+ +D +RTD + TF F +P + L ++LL Y +N +GYCQGM+
Sbjct: 99 LQGERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMN 158
Query: 497 DLLSPILFVMEDESQSFWCFVALMERLGPN-FNRDQNGMHSQLFALSKLVELLDNPLHNY 555
+ ++ + +E +SFW AL+ R+ P+ ++ G+ + L +LV +
Sbjct: 159 FIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGAL 218
Query: 556 FKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNK 615
++ L RW + F E +R+W+ L+ + V + ++K+++
Sbjct: 219 MERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNE--GSKIIFRVALTLIKQHQEL 276
Query: 616 IM 617
I+
Sbjct: 277 IL 278
>sp|A2AWA9|RBGP1_MOUSE Rab GTPase-activating protein 1 OS=Mus musculus GN=Rabgap1 PE=2
SV=1
Length = 1064
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 32/251 (12%)
Query: 381 IFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRF 440
+ GV LR EVW L G + D + L
Sbjct: 557 LVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRIL-------------------------I 591
Query: 441 TKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLS 500
TK + I +D+ RT + +F L I YS Y+ ++GYCQG S L+
Sbjct: 592 TKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQS-FLA 650
Query: 501 PILFVMEDESQSFWCFVALMERLGPN--FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQ 558
+L + E Q+F V +M G F ++ +H + + L +L++ L+N+F
Sbjct: 651 AVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLD 710
Query: 559 NDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMG 618
+ + +W L F +F + ++L +S + V + +LK ++ ++
Sbjct: 711 ISLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGIS--VIFNVALGLLKTSKDDLL- 767
Query: 619 EQMDFDTLLKF 629
DF+ LKF
Sbjct: 768 -LTDFEGALKF 777
>sp|Q9Y3P9|RBGP1_HUMAN Rab GTPase-activating protein 1 OS=Homo sapiens GN=RABGAP1 PE=1
SV=3
Length = 1069
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 32/251 (12%)
Query: 381 IFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRF 440
+ GV LR EVW L G + D + L
Sbjct: 562 LVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRIL-------------------------I 596
Query: 441 TKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLS 500
TK + I +D+ RT + +F L I YS Y+ ++GYCQG S L+
Sbjct: 597 TKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQS-FLA 655
Query: 501 PILFVMEDESQSFWCFVALMERLGPN--FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQ 558
+L + E Q+F V +M G F ++ +H + + L +L++ L+N+F
Sbjct: 656 AVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLD 715
Query: 559 NDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMG 618
+ + +W L F +F + ++L +S + V + +LK ++ ++
Sbjct: 716 ISLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGIS--VIFNVALGLLKTSKDDLL- 772
Query: 619 EQMDFDTLLKF 629
DF+ LKF
Sbjct: 773 -LTDFEGALKF 782
>sp|Q5RAN1|RBGP1_PONAB Rab GTPase-activating protein 1 OS=Pongo abelii GN=RABGAP1 PE=2
SV=1
Length = 1069
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 32/251 (12%)
Query: 381 IFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRF 440
+ GV LR EVW L G + D + L
Sbjct: 562 LVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRIL-------------------------I 596
Query: 441 TKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLS 500
TK + I +D+ RT + +F L I YS Y+ ++GYCQG S L+
Sbjct: 597 TKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQS-FLA 655
Query: 501 PILFVMEDESQSFWCFVALMERLGPN--FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQ 558
+L + E Q+F V +M G F ++ +H + + L +L++ L+N+F
Sbjct: 656 AVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLD 715
Query: 559 NDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMG 618
+ + +W L F +F + ++L +S + V + +LK ++ ++
Sbjct: 716 ISLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGIS--VIFNVALGLLKTSKDDLL- 772
Query: 619 EQMDFDTLLKF 629
DF+ LKF
Sbjct: 773 -LTDFEGALKF 782
>sp|P53258|GYP2_YEAST GTPase-activating protein GYP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDR1 PE=1 SV=1
Length = 950
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 37/277 (13%)
Query: 351 PRQPPLGSEE-----WTTFLDNEGR---VMDSNALRKRIFYGGVDHKLRREVWAFLLGYY 402
P P + E+ W + GR V+ + RK I G V +++R E+W G
Sbjct: 203 PGNPTMVKEKAKLRLWFDYFRENGRNLAVVQTPMFRKLIRIG-VPNRMRGEIWELCSGAM 261
Query: 403 AYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVT 462
Y+R EYE I E A + ++ + I+KD+ R+ +
Sbjct: 262 ----------YMRYANSGEYERILN-------ENAGKTSQAIDE---IEKDLKRSLPEYS 301
Query: 463 FFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMER 522
+ ++ + LR++L YS+ N D+GYCQ M+ +++ L M +E Q+FWC L +
Sbjct: 302 AYQTEEG--IQRLRNVLTAYSWKNPDVGYCQAMNIVVAGFLIFMSEE-QAFWCLCNLCDI 358
Query: 523 LGPN-FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEY 581
P +++ G VE L Y Q+D W L F
Sbjct: 359 YVPGYYSKTMYGTLLDQRVFESFVEDRMPVLWEYILQHDIQLSVVSLPWFLSLFFTSMPL 418
Query: 582 EKTMRLWEVLWTHYLSEHLHLY-VCVAILKRYRNKIM 617
E +R+ ++ +++ + L+ V +A+LK + I+
Sbjct: 419 EYAVRIMDIF---FMNGSITLFQVALAVLKINADDIL 452
>sp|Q7T2D0|SGSM3_DANRE Small G protein signaling modulator 3 OS=Danio rerio GN=sgsm3 PE=2
SV=1
Length = 755
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 32/278 (11%)
Query: 374 SNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS 433
S+ LR + GG+ H +R ++W L G T ++ Y +K S ++ Q
Sbjct: 105 SDRLRSLVL-GGIPHSMRPQLWMRLSGALQKKRT-SDISYREIVKNSSNDDTTAAKQ--- 159
Query: 434 PEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 493
I+KD++RT + F+ + V LR +L ++ D+GYCQ
Sbjct: 160 ----------------IEKDLLRTMPTNACFNTLTSVGVPKLRRVLRGLAWLYPDIGYCQ 203
Query: 494 GMSDLLSPILFVMEDESQSFWCFVALMERLGPN--FNRDQNGMHSQLFALSKLVELLDNP 551
G ++S +L +E+E + W AL+E L P F+ G+ + L +L+
Sbjct: 204 GTGMVVSCLLLFLEEED-ALWMMCALIEDLLPPSYFSSTLLGVQTDQRVLRQLIVQYLPR 262
Query: 552 LHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKR 611
L +++D W L F + +R+W++L+ Y + V + +LK
Sbjct: 263 LDKLLQEHDIELSLITLHWFLTAFASVVDIRILLRIWDLLF--YEGSMVLFQVTLGMLKI 320
Query: 612 YRNKIMGEQMD---FDTLLKFINELSGRIDLDAILRDA 646
++++ + F+TL ++L D A+L +A
Sbjct: 321 KEDELVSSENSASIFNTLSDLPSQLE---DGAAVLGEA 355
>sp|Q9BYX2|TBD2A_HUMAN TBC1 domain family member 2A OS=Homo sapiens GN=TBC1D2 PE=1 SV=3
Length = 928
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 432 ISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGY 491
+S QAR R+ I+ D+ RT + F + LR +LL +S+ N +GY
Sbjct: 656 LSRGQAREHPAARQ----IELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGY 711
Query: 492 CQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNP 551
CQG++ L + L V+E+E +FWC VA++E + P + N + + L +LL
Sbjct: 712 CQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPA-DYYCNTLTASQVDQRVLQDLLSEK 770
Query: 552 LHN---YFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEV 590
L + Q+ F W L+ F +R+W+
Sbjct: 771 LPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDA 812
>sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1
Length = 795
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 65/269 (24%)
Query: 439 RFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVH-LLRDILLTYSFYNFDLGYCQGMSD 497
+F + +E + +I++DV RT + FF + NV +L D+L Y+ N L Y QGM +
Sbjct: 152 KFFQDKELRSMIEQDVKRTFPEMQFFQQE---NVRKILTDVLFCYARENEQLLYKQGMHE 208
Query: 498 LLSPILFVMEDESQSFW---------------------------CFVALMERLGP---NF 527
LL+PI+FV+ + Q+F F LME P F
Sbjct: 209 LLAPIVFVLHCDHQAFLHASESAQPSEEMKTVLNPEYLEHDAYAVFSQLMETAEPWFSTF 268
Query: 528 NRD-QNGMHSQL----FA-----------LSKLVELLDN-------PLHNYFKQNDCLNY 564
D Q G + + FA ++K+ ++ D+ L+ + + +
Sbjct: 269 EHDGQKGKETLMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQ 328
Query: 565 FFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFD 624
+ RWV + F REF + + +W+ L+ LS L Y+ VA+L R+ ++ ++
Sbjct: 329 IYGLRWVRLLFGREFPLQDLLVVWDALFADGLSLGLVDYIFVAMLLYIRDALISS--NYQ 386
Query: 625 TLL------KFINELSGRIDLDAILRDAE 647
T L FI ++ I LRD +
Sbjct: 387 TCLGLLMHYPFIGDVHSLILKALFLRDPK 415
>sp|Q3U0J8|TBD2B_MOUSE TBC1 domain family member 2B OS=Mus musculus GN=Tbc1d2b PE=1 SV=2
Length = 965
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 118/281 (41%), Gaps = 26/281 (9%)
Query: 364 FLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYD-STYAEREYLRCIKKSEY 422
F R M + K + G+ H+ R +VW + + + E +Y + + +
Sbjct: 643 FASTMNREMACSPELKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDSMEPDYFQTLLQKAL 702
Query: 423 ENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTY 482
E Q+ + +Q I+ D++RT + + + + LR +LL +
Sbjct: 703 EK-----QNPASKQ-------------IELDLLRTLPNNKHYSSPTSEGIQKLRSVLLAF 744
Query: 483 SFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFNRDQNGMHSQL--FA 540
S+ N D+GYCQG++ L++ L + D+ +FWC V ++E P + + SQ+
Sbjct: 745 SWRNPDIGYCQGLNRLVAVALLYL-DQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRV 803
Query: 541 LSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHL 600
L+ LH +F+Q F W L+ F + ++W+ Y +
Sbjct: 804 FRDLLSEKLPRLHTHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFL--YEGPKV 861
Query: 601 HLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDA 641
+A+ K +I+ Q D ++ K++ + R LDA
Sbjct: 862 IFRFALALFKYKEEEILKLQ-DSMSIFKYLRYFT-RTILDA 900
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,800,532
Number of Sequences: 539616
Number of extensions: 10985127
Number of successful extensions: 30242
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 29925
Number of HSP's gapped (non-prelim): 201
length of query: 685
length of database: 191,569,459
effective HSP length: 124
effective length of query: 561
effective length of database: 124,657,075
effective search space: 69932619075
effective search space used: 69932619075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)