Your job contains 1 sequence.
>005656
MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV
LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS
VIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQA
YVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSY
LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV
YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR
IWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYA
SGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPK
SQWQSLINLDIIKARNKPIEPPKKPEKAPFFLPSVPSLSGEILFKPSESTKEDTESLKVG
NKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDK
RPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLLEVQS
AVWQKIDKMFQSARCVVSFLSNSQL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005656
(685 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135393 - symbol:AT4G04940 "AT4G04940" species... 2615 5.8e-272 1
UNIPROTKB|F1NKR5 - symbol:WDR36 "Uncharacterized protein"... 937 9.8e-97 2
POMBASE|SPCC1672.07 - symbol:SPCC1672.07 "U3 snoRNP-assoc... 951 1.2e-95 1
UNIPROTKB|G3X6I6 - symbol:WDR36 "Uncharacterized protein"... 930 1.4e-95 2
UNIPROTKB|Q8NI36 - symbol:WDR36 "WD repeat-containing pro... 904 7.9e-93 2
UNIPROTKB|F1PNT8 - symbol:WDR36 "Uncharacterized protein"... 923 1.1e-92 1
UNIPROTKB|F1RLI4 - symbol:WDR36 "Uncharacterized protein"... 918 3.9e-92 1
RGD|1586463 - symbol:Wdr36 "WD repeat domain 36" species:... 893 8.9e-92 2
FB|FBgn0038146 - symbol:CG9799 species:7227 "Drosophila m... 892 2.2e-89 1
ZFIN|ZDB-GENE-030131-464 - symbol:wdr36 "WD repeat domain... 891 2.8e-89 1
CGD|CAL0005566 - symbol:UTP21 species:5476 "Candida albic... 775 5.5e-77 1
UNIPROTKB|Q5ALL2 - symbol:UTP21 "Putative uncharacterized... 775 5.5e-77 1
SGD|S000004401 - symbol:UTP21 "Subunit of U3-containing 9... 754 9.3e-75 1
ASPGD|ASPL0000018270 - symbol:AN8293 species:162425 "Emer... 543 1.5e-65 2
UNIPROTKB|G4N4W8 - symbol:MGG_16744 "Uncharacterized prot... 484 2.3e-64 3
DICTYBASE|DDB_G0277019 - symbol:wdr36 "U3 snoRNP protein"... 456 2.0e-52 2
WB|WBGene00012887 - symbol:Y45F10D.7 species:6239 "Caenor... 295 6.3e-46 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 152 9.4e-18 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 159 1.9e-17 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 146 8.3e-17 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 145 1.1e-16 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 151 1.4e-16 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 170 1.8e-16 3
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 139 5.5e-16 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 142 6.0e-16 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 138 9.2e-16 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 138 1.1e-15 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 138 1.3e-15 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 136 2.2e-15 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 157 2.5e-15 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 140 3.6e-15 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 157 3.7e-15 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 157 3.7e-15 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 157 3.7e-15 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 157 3.7e-15 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 157 3.7e-15 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 135 1.0e-14 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 146 1.3e-14 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 151 2.3e-14 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 155 3.1e-14 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 132 6.0e-14 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 153 8.4e-14 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 132 1.2e-13 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 154 2.2e-13 2
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 171 3.0e-13 2
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 170 3.5e-13 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 130 4.1e-13 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 172 5.3e-13 2
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 174 5.3e-13 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 127 8.0e-13 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 125 1.0e-12 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 125 1.4e-12 2
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 143 2.2e-12 2
SGD|S000004212 - symbol:UTP13 "Nucleolar protein" species... 153 2.8e-12 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 132 2.9e-12 2
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 170 3.8e-12 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 125 3.8e-12 2
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 142 4.8e-12 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 125 4.8e-12 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 138 5.2e-12 2
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 138 6.3e-12 2
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 138 6.3e-12 2
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 138 6.3e-12 2
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 138 6.3e-12 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 140 7.8e-12 2
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 123 9.7e-12 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 123 1.0e-11 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 182 1.1e-11 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 125 1.6e-11 2
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 168 2.2e-11 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 125 2.6e-11 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 143 3.5e-11 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 134 4.6e-11 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 129 6.3e-11 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 156 7.3e-11 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 132 7.4e-11 2
UNIPROTKB|E1BB53 - symbol:TEP1 "Uncharacterized protein" ... 131 7.8e-11 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 125 1.1e-10 2
TAIR|locus:2089855 - symbol:AT3G21540 "AT3G21540" species... 159 1.2e-10 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 159 1.4e-10 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 130 1.5e-10 2
WB|WBGene00011051 - symbol:pfs-2 species:6239 "Caenorhabd... 136 1.5e-10 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 129 1.9e-10 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 129 1.9e-10 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 129 1.9e-10 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 129 1.9e-10 2
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 136 2.0e-10 2
UNIPROTKB|E1BR73 - symbol:APAF1 "Uncharacterized protein"... 135 2.1e-10 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 129 3.1e-10 2
UNIPROTKB|F1P1P3 - symbol:APAF1 "Uncharacterized protein"... 133 3.4e-10 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 129 4.7e-10 2
RGD|1306281 - symbol:Aamp "angio-associated, migratory ce... 114 4.7e-10 2
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 132 7.6e-10 2
TAIR|locus:2037798 - symbol:PWP2 "AT1G15440" species:3702... 138 8.1e-10 3
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 129 8.1e-10 2
UNIPROTKB|Q3SZK1 - symbol:AAMP "Angio-associated migrator... 112 9.9e-10 2
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 151 1.0e-09 1
UNIPROTKB|E1BS49 - symbol:APAF1 "Uncharacterized protein"... 135 1.1e-09 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 174 1.2e-09 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 126 1.4e-09 2
WARNING: Descriptions of 652 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 2615 (925.6 bits), Expect = 5.8e-272, P = 5.8e-272
Identities = 499/688 (72%), Positives = 585/688 (85%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RGAVTAL+FS+DG+PLLASG S GVISIWNL K+RLQSVIR+AHD++IISL+F ANEPVL
Sbjct: 224 RGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVL 283
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
MSASADNS+KMWIFDT DGDPRLLRFRSGHSAPPLCIRFY+NGRHILSAGQDRAFRLFSV
Sbjct: 284 MSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSV 343
Query: 122 IQDQQSRELSQRHVAKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAY 181
IQ+QQSRELSQRH+++RA+ PV++FDCAEIRERDWCNVVTCHMDTA+AY
Sbjct: 344 IQEQQSRELSQRHISRRAKKLRLKEEELKLKPVVSFDCAEIRERDWCNVVTCHMDTAEAY 403
Query: 182 VWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL 241
VWRLQNFVLGEHIL+PCPENPT +KAC ISACGNFAV+GTAGGWIERFNLQSGISRGSY
Sbjct: 404 VWRLQNFVLGEHILKPCPENPTPIKACAISACGNFAVVGTAGGWIERFNLQSGISRGSYF 463
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVY 301
DMSE+ YAH+GEV+GVACDSTNTLMISAGYHGD+KVWDFK R+LKS+W+VGCSLVKIVY
Sbjct: 464 DMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVY 523
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
HRVNGLLATVADD VIRL+DVV L+MVR+F GHTDRITD CFSEDGKW++SS MDGSLRI
Sbjct: 524 HRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRI 583
Query: 362 WDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYAS 421
WDVILA+QID +HVDV ITALSLSPNMDVLATAH DQNGVYLWVN+ MFSG +++SYAS
Sbjct: 584 WDVILAKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLWVNQSMFSGLPSVESYAS 643
Query: 422 GKEIVSVKMPSVSSVEGCQ-DENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPK 480
GK++V+VK+PSVS++ + D++ + + ++ + SF + ++QIP+LVTLSLLPK
Sbjct: 644 GKDVVNVKLPSVSALTSSEADDDMDRQVLENSEALQASSFSIS--QKQIPELVTLSLLPK 701
Query: 481 SQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKP--SESTKEDTESLK 538
SQWQSLINLDIIKARN APFFLPS+PSLSG+ILFK SE+ E+ E+ K
Sbjct: 702 SQWQSLINLDIIKARNKPIEPPKKPEKAPFFLPSIPSLSGDILFKANDSEADGENEENNK 761
Query: 539 VG-NKTKP-DIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQ 596
N K D S F + L S + K+F FT+Y+KSLSPS LDMELRML+IID D +
Sbjct: 762 KDQNSMKNFDALESPFSKHLKSSWDSKHFLDFTNYMKSLSPSALDMELRMLEIIDEDVEE 821
Query: 597 ELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLL 656
EL KRPE++ I LLDY I+E+SC+N+FEF+QAV++LFLKIHGET+RCH LQ+KA+KLL
Sbjct: 822 ELIKRPEFILIGQLLDYFINEVSCKNDFEFMQAVVKLFLKIHGETIRCHPSLQEKAKKLL 881
Query: 657 EVQSAVWQKIDKMFQSARCVVSFLSNSQ 684
E QS VWQK++K+FQS RC+V+FLSNSQ
Sbjct: 882 ETQSLVWQKMEKLFQSTRCIVTFLSNSQ 909
>UNIPROTKB|F1NKR5 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0003824 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
SUPFAM:SSF50952 GeneTree:ENSGT00390000004976 OMA:DGIIACH
EMBL:AADN02056073 EMBL:AADN02056074 EMBL:AADN02056075
EMBL:AADN02056076 EMBL:AADN02056077 EMBL:AADN02056078
IPI:IPI00599626 ProteinModelPortal:F1NKR5
Ensembl:ENSGALT00000000326 Uniprot:F1NKR5
Length = 890
Score = 937 (334.9 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 212/595 (35%), Positives = 326/595 (54%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +TA++F +DG P++A+G+ G I++W+LE+++L S +R AH A+ + F EP+L+
Sbjct: 229 GPITAISFRTDGHPVMAAGSPVGHIALWDLEEKKLMSQMRNAHSTAVAGMSFVPGEPLLI 288
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSV 121
+ ADN+I++WIFD G R+LR R GHSAPP IR++ NG ILSAGQD + FS
Sbjct: 289 TNGADNAIRVWIFDGPGGTGRVLRSRMGHSAPPTKIRYHGQNGEQILSAGQDGTLQSFST 348
Query: 122 IQDQQSRELSQRHV-AKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQA 180
+ ++ ++ L + + K+++ P+ AF + DW ++ CH
Sbjct: 349 VHERFNKSLGRGSINKKKSKKKGLQHDTMALPPITAFASEVAHQNDWDGIIACHQGYITC 408
Query: 181 YVWRLQNFVLGEHILRP---CPENPTAVKACT--ISACGNFAVLGTAGGWIERFNLQSGI 235
W Q +G H LRP P + A I+ CGNFAV+G + G ++ +N+QSGI
Sbjct: 409 TTWNYQKTSMGAHKLRPEEFSKNKPIDIYATAVDITTCGNFAVIGMSTGQVDVYNMQSGI 468
Query: 236 SRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS 295
RG Y E+ AH G + GVA D N L I+AG G IK W FK +DL ++ S
Sbjct: 469 HRGRY--GREK---AHEGSIRGVAVDGLNQLTITAGSDGLIKFWKFKAKDLVHSTDLSSS 523
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
I+ HR +G+L DD I + D+ ++VRKF GH RI D FS DG+WL++S M
Sbjct: 524 PSGILLHRDSGILGIAFDDFSISVLDIETWKIVRKFSGHHGRINDMTFSPDGRWLITSSM 583
Query: 356 DGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSN 415
D +++ WD+ ID +D + +L++SP D LA+AHVD G+YLW NR ++S
Sbjct: 584 DCTIKTWDLPSGCLIDCFLLDSAAVSLTMSPTGDFLASAHVDDLGIYLWSNRSIYS---- 639
Query: 416 IDSYASGKEIVSVKMPSVSSVEG-C--QDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDL 472
S + + + PSV ++ G C QD + ++ + + + DS P +Q L
Sbjct: 640 ---LVSLRPLPADYEPSVITLPGTCPLQDVDVAEGEDKCDEMIEYDS---P--EQLGEQL 691
Query: 473 VTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKE 532
VTLSLLP+S+W++L++LD+IK +N APFF+P+VP L P +
Sbjct: 692 VTLSLLPESRWKNLLSLDVIKKKNKPREPPKVPTSAPFFIPTVPGLIPRYA-APEQDNDT 750
Query: 533 DTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 587
++ + +G + S F L ++A + +K L PS +++ELR L
Sbjct: 751 QSKVVNIGVLAQK----SDFYVHLEEALSTNEYTAPLNLLKDLGPSNIEIELRSL 801
Score = 216 (81.1 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 57/214 (26%), Positives = 106/214 (49%)
Query: 472 LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTK 531
LVTLSLLP+S+W++L++LD+IK +N APFF+P+VP L P +
Sbjct: 691 LVTLSLLPESRWKNLLSLDVIKKKNKPREPPKVPTSAPFFIPTVPGLIPRYA-APEQDND 749
Query: 532 EDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIID 591
++ + +G + S F L ++A + +K L PS +++ELR L
Sbjct: 750 TQSKVVNIGVLAQK----SDFYVHLEEALSTNEYTAPLNLLKDLGPSNIEIELRSLA--- 802
Query: 592 HDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDK 651
+ L+ +L ++ ++++ + NFE QA + LFLK+H + + L ++
Sbjct: 803 PEGGGSLEVMLSFLR---MIGMMLNK---KYNFEIAQAYLALFLKLHLKIISSEPSLLEE 856
Query: 652 ARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 685
L + W + +F + CV++++ ++ L
Sbjct: 857 ISVLSKQLEETWIHLRSLFNQSLCVLTYMKSALL 890
Score = 71 (30.1 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 29/149 (19%), Positives = 65/149 (43%)
Query: 264 NTLMISAGYHGDIKVWDFKGRDLKSR---WEVGCSLVKIVYHRVNGLLATVADDLVIRLF 320
N +++ + G +++W+ + L W +G + + V+ + + +I +
Sbjct: 157 NKILLGSE-QGGLQLWNIRSNKLLYSFPGWGLGVTTLAQA-PAVDVIAVGLVSGHII-IH 213
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVI---LARQIDAIHVD 376
++ + KF+ IT F DG ++++G G + +WD+ L Q+ H
Sbjct: 214 NIKFDETLMKFQQDWGPITAISFRTDGHPVMAAGSPVGHIALWDLEEKKLMSQMRNAH-S 272
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLWV 405
++ +S P +L T D N + +W+
Sbjct: 273 TAVAGMSFVPGEPLLITNGAD-NAIRVWI 300
Score = 44 (20.5 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRL 37
AV+A+ S + G+ G + +WN+ +L
Sbjct: 145 AVSAILHPSTYLNKILLGSEQGGLQLWNIRSNKL 178
>POMBASE|SPCC1672.07 [details] [associations]
symbol:SPCC1672.07 "U3 snoRNP-associated protein Utp21
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=NAS] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISO]
[GO:0005819 "spindle" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0032153
"cell division site" evidence=IDA] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPCC1672.07
GO:GO:0005829 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672 GO:GO:0032153
GO:GO:0044732 eggNOG:COG2319 GO:GO:0006364 GO:GO:0032040
GO:GO:0005732 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
OrthoDB:EOG46T68Q PIR:T41051 RefSeq:NP_587878.1
ProteinModelPortal:O14053 STRING:O14053 EnsemblFungi:SPCC1672.07.1
GeneID:2539299 KEGG:spo:SPCC1672.07 NextBio:20800466 Uniprot:O14053
Length = 902
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 212/587 (36%), Positives = 327/587 (55%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + +F +DG P+LAS G +S W+L KRR+Q+V AH ++ + F +P+L+
Sbjct: 246 GQVLSCSFRTDGTPILASSNPIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLNGQPILV 305
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL-SAGQDRAFRLFSV 121
+A DNS+K WIFD+ DG PR+LR R+GH PP ++FY H L SA DR+ R S+
Sbjct: 306 TAGPDNSLKEWIFDSMDGAPRILRSRNGHYEPPSFVKFYGKSVHFLISAATDRSLRAVSL 365
Query: 122 IQDQQSRELSQRHVAKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAY 181
QD QS ELSQ V +A+ + A + RE+ W NV+T H + + A
Sbjct: 366 YQDSQSTELSQGSVISKAKKLNVRPEELKLPEITALSSSNTREKYWDNVLTAHKNDSSAR 425
Query: 182 VWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL 241
W ++ LG+H+L P + T+V++ +S CGNF ++G++ G ++ +N+QSGI R S+
Sbjct: 426 TWNWKSKTLGQHVL-PTSDG-TSVRSVCVSCCGNFGLIGSSKGVVDVYNMQSGIKRKSF- 482
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVY 301
S S V V D+ N ++++A G +K WDF +L +VG S+ +Y
Sbjct: 483 GQSSLSGKP----VTAVMLDNVNRILVTASLDGILKFWDFNKGNLIDSLDVGSSITHAIY 538
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
+ L+A DD IR+ DV ++VR+ GH++R+T F FS+ G+WL+++ +DG++R
Sbjct: 539 QHSSDLVAVACDDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRT 598
Query: 362 WDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYAS 421
WD+ ID+I T+L+ +P D LAT HVDQ G+ LW N MF ++ + A
Sbjct: 599 WDLPTGHLIDSISTPSVCTSLTFAPTGDYLATTHVDQVGISLWTNLSMFK---HVSTKAL 655
Query: 422 G-KEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPK 480
++V V PSVS +G ++ +V ++ ++ T Q P+L TLS LP+
Sbjct: 656 RLDDVVEVSAPSVSGEKGISVVEAAL-NVE-SNAEDEEDISYRTMDQLDPNLQTLSKLPR 713
Query: 481 SQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVG 540
+QWQ+LINL+ IKARN APFFLPS+ S + K +T+ +
Sbjct: 714 TQWQTLINLEAIKARNAPKEVPKVPEKAPFFLPSLKDQSEATVPKQPIATEISKPTAVAS 773
Query: 541 NKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 587
K + ++F LLH + AF +Y+KSL P+ +D+E+R L
Sbjct: 774 IK----VSGTEFSTLLHG----NDDDAFFEYLKSLGPAKIDLEIRSL 812
Score = 126 (49.4 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 45/168 (26%), Positives = 75/168 (44%)
Query: 508 APFFLPSVPSLSGEILFKPSESTKEDTESLKVGNK-TKP----DIPVS--QFIQLLHSCA 560
AP +P VP + L + ++ + + +KP I VS +F LLH
Sbjct: 730 APKEVPKVPEKAPFFLPSLKDQSEATVPKQPIATEISKPTAVASIKVSGTEFSTLLHG-- 787
Query: 561 EMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISC 620
+ AF +Y+KSL P+ +D+E+R LD P Y L ++ + +S
Sbjct: 788 --NDDDAFFEYLKSLGPAKIDLEIR-----------SLDAYPPYEEFILFINIMTRRLSK 834
Query: 621 RNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLLEVQSAVWQKIDK 668
R +FE +QA + +F K H + + H +D + E A W+ + K
Sbjct: 835 RRDFELVQACMSVFTKSHEDVLLMHDTPEDTV-PVFESLKA-WESVHK 880
Score = 86 (35.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 219 LGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNT-LMISAGYHGDIK 277
+GT G I FNL++G S L + +G+V+ + + T ++ S+ GD+
Sbjct: 221 VGTISGRIVIFNLKNG----SIL-----MEFKQDGQVLSCSFRTDGTPILASSNPIGDLS 271
Query: 278 VWDFKGRDLKS---RWEVGCSLVKIVYHRVNGLLATVADDLVIR--LFDVV--ALRMVRK 330
WD R +++ G SL KI + +L T D ++ +FD + A R++R
Sbjct: 272 FWDLSKRRIQNVTYNAHFG-SLPKIQFLNGQPILVTAGPDNSLKEWIFDSMDGAPRILRS 330
Query: 331 FEGHTD--RITDFCFSEDGKWLLSSGMDGSLR 360
GH + F + + +L+S+ D SLR
Sbjct: 331 RNGHYEPPSFVKF-YGKSVHFLISAATDRSLR 361
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 29/107 (27%), Positives = 46/107 (42%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL-MS 63
+T+L S + G S G + IWNL + +E + I SL PVL +
Sbjct: 163 ITSLLHPSTYLNKILLGFSDGALQIWNLRVSKRVHEFQEFFGDGITSL---TQAPVLDVL 219
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 110
A S ++ IF+ +G L+ F+ L F +G IL++
Sbjct: 220 AVGTISGRIVIFNLKNGSI-LMEFKQDGQV--LSCSFRTDGTPILAS 263
Score = 61 (26.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 356 DGSLRIWDVILARQIDAIH--VDVSITALSLSPNMDVLATAHV 396
DG+L+IW++ +++++ IT+L+ +P +DVLA +
Sbjct: 182 DGALQIWNLRVSKRVHEFQEFFGDGITSLTQAPVLDVLAVGTI 224
>UNIPROTKB|G3X6I6 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GeneTree:ENSGT00390000004976 OMA:DGIIACH
EMBL:DAAA02029634 Ensembl:ENSBTAT00000007218 Uniprot:G3X6I6
Length = 948
Score = 930 (332.4 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 213/594 (35%), Positives = 323/594 (54%)
Query: 3 GAVTALAF-SSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G +T+++F ++DG P++A+G+ G I +W+LE ++L + +R AH AI L F EP+L
Sbjct: 286 GPITSISFRTADGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLL 345
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFS 120
++ ADN++++WIFD G+ RLLRFR GHSAP IR+Y NG+HILSA QD + FS
Sbjct: 346 VTNGADNALRIWIFDGPAGEGRLLRFRMGHSAPLTRIRYYGQNGQHILSASQDGTLQSFS 405
Query: 121 VIQDQQSRELSQRHVAKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTA 178
+ ++ ++ L + K+ R PV F E RE DW +V CH
Sbjct: 406 TVHEKFNKSLGHGLINKKRVKRKGLQNTMSVRLPPVTEFAAEEARESDWDGIVACHQGKL 465
Query: 179 QAYVWRLQNFVLGEHILRPC--PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGIS 236
W Q +G H LRP + T A I++CGNFAV+G + G ++ +N+QSGI
Sbjct: 466 SCSTWNYQRSTIGAHFLRPAGLKTDSTTATAVDITSCGNFAVIGLSSGAVDVYNMQSGIH 525
Query: 237 RGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSL 296
RGS+ + AH G V GVA D N L I+AG G +K W+FK + L + S
Sbjct: 526 RGSF-----GRDQAHKGSVRGVAVDGLNQLTITAGSEGVLKFWNFKNKVLIHSVSLDSSP 580
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
++ HR +G+L DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD
Sbjct: 581 NLMLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMTFSPDGRWLISASMD 640
Query: 357 GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNI 416
S+R WD+ ID+ +D + +++SP D LAT+HVD GVYLW N ++S
Sbjct: 641 CSIRTWDLPSGCLIDSFLLDSAPLNVTMSPTGDFLATSHVDHLGVYLWSNISLYS----- 695
Query: 417 DSYASGKEIVSVKMPSVSSVEG-CQ--DENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLV 473
S + + + +PSV + G CQ D S+ V ++ + + + P +Q LV
Sbjct: 696 --VVSLRPLPTDYVPSVVMLPGTCQTQDVELSEETVEPSEEMIE--YDSP--EQLNEQLV 749
Query: 474 TLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKED 533
TLSLLP+S+W++L+NLD+IK +N APFF+P++P L + +
Sbjct: 750 TLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNNDPQQ 809
Query: 534 TESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 587
++ + +G + S F L + A + +K L PS ++ ELR L
Sbjct: 810 SKVVNLGILAQK----SDFCLKLEEGLVNNKYEAAVNLLKELGPSGIETELRSL 859
Score = 221 (82.9 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 73/276 (26%), Positives = 128/276 (46%)
Query: 414 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIP 470
SNI Y+ S + + + +PSV + G CQ ++ + T ++ + +Q
Sbjct: 689 SNISLYSVVSLRPLPTDYVPSVVMLPGTCQTQDVELSE--ETVEPSEEMIEYDSPEQLNE 746
Query: 471 DLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSEST 530
LVTLSLLP+S+W++L+NLD+IK +N APFF+P++P L +
Sbjct: 747 QLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNND 806
Query: 531 KEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQII 590
+ ++ + +G + S F L + A + +K L PS ++ ELR L
Sbjct: 807 PQQSKVVNLGILAQK----SDFCLKLEEGLVNNKYEAAVNLLKELGPSGIETELRSLS-- 860
Query: 591 DHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQ 649
D + +L I +LD + +FE QA + LFLK+H +T+ L
Sbjct: 861 -PDCGGSVGIMKSFLKMIGTMLDR-------KRDFELAQAYLALFLKLHLKTLPSEPVLL 912
Query: 650 DKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 685
++ KL W + +F + CV++++ ++ L
Sbjct: 913 EEMTKLSSQLEENWIHLQLLFNQSLCVLNYIKSALL 948
Score = 53 (23.7 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 348 KWLLSSGMDGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLA 392
K LL S GSL++W+V + + V +TAL +P +DV+A
Sbjct: 215 KILLGSEQ-GSLQLWNVKSNKLLYTFAGWKVGVTALQQAPAVDVVA 259
Score = 44 (20.5 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALS--L 384
+V F+GH I G ++S D L IW + + + D S+ +S L
Sbjct: 150 VVHTFKGHKAEI--HLLQPFGDHVISVDTDSVLIIWHIYSEEEYLQLPFDKSVFKISAIL 207
Query: 385 SPN--MDVLATAHVDQNGVYLW 404
P+ ++ + +Q + LW
Sbjct: 208 HPSTYLNKILLGS-EQGSLQLW 228
Score = 42 (19.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNL 32
+G + + FS DG+ L+++ I W+L
Sbjct: 619 QGQINDMTFSPDGRWLISASMDCS-IRTWDL 648
Score = 40 (19.1 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 21 GASSGVISIWNLEKRRL 37
G+ G + +WN++ +L
Sbjct: 219 GSEQGSLQLWNVKSNKL 235
>UNIPROTKB|Q8NI36 [details] [associations]
symbol:WDR36 "WD repeat-containing protein 36" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 GO:GO:0050896
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH EMBL:AF385437
EMBL:BC133025 EMBL:BC136517 EMBL:AK095312 IPI:IPI00169325
RefSeq:NP_644810.1 UniGene:Hs.533237 ProteinModelPortal:Q8NI36
SMR:Q8NI36 IntAct:Q8NI36 STRING:Q8NI36 PhosphoSite:Q8NI36
DMDM:46577504 PaxDb:Q8NI36 PeptideAtlas:Q8NI36 PRIDE:Q8NI36
Ensembl:ENST00000506538 Ensembl:ENST00000513710 GeneID:134430
KEGG:hsa:134430 UCSC:uc003kpd.3 CTD:134430 GeneCards:GC05P110427
HGNC:HGNC:30696 HPA:HPA037797 MIM:609669 MIM:609887
neXtProt:NX_Q8NI36 Orphanet:359 PharmGKB:PA134933637
HOVERGEN:HBG059718 InParanoid:Q8NI36 PhylomeDB:Q8NI36
GenomeRNAi:134430 NextBio:83377 ArrayExpress:Q8NI36 Bgee:Q8NI36
CleanEx:HS_WDR36 Genevestigator:Q8NI36 GermOnline:ENSG00000134987
Uniprot:Q8NI36
Length = 951
Score = 904 (323.3 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 203/593 (34%), Positives = 317/593 (53%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +T+++F +DG P++A+G+ G I +W+LE ++L + +R AH AI L F EP+L+
Sbjct: 290 GPITSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLV 349
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSV 121
+ ADN++++WIFD G+ RLLRFR GHSAP IR+Y NG+ ILSA QD + FS
Sbjct: 350 TNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTNIRYYGQNGQQILSASQDGTLQSFST 409
Query: 122 IQDQQSRELSQRHVAKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQ 179
+ ++ ++ L + K+ R P+ F E RE DW ++ CH
Sbjct: 410 VHEKFNKSLGHGLINKKRVKRKGLQNTMSVRLPPITKFAAEEARESDWDGIIACHQGKLS 469
Query: 180 AYVWRLQNFVLGEHILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
W Q +G + L+P ++ A I++CGNFAV+G + G ++ +N+QSGI R
Sbjct: 470 CSTWNYQKSTIGAYFLKPKELKKDDITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHR 529
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV 297
GS+ + AH G V GVA D N L ++ G G +K W+FK + L + S
Sbjct: 530 GSF-----GKDQAHKGSVRGVAVDGLNQLTVTTGSEGLLKFWNFKNKILIHSVSLSSSPN 584
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++ HR +G+L DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD
Sbjct: 585 IMLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDC 644
Query: 358 SLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID 417
S+R WD+ ID +D + +S+SP D LAT+HVD G+YLW N ++S
Sbjct: 645 SIRTWDLPSGCLIDCFLLDSAPLNVSMSPTGDFLATSHVDHLGIYLWSNISLYS------ 698
Query: 418 SYASGKEIVSVKMPSVSSVEG-CQ--DENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVT 474
S + + + +PS+ + G CQ D S+ V +D + + + P +Q LVT
Sbjct: 699 -VVSLRPLPADYVPSIVMLPGTCQTQDVEVSEETVEPSDELIE--YDSP--EQLNEQLVT 753
Query: 475 LSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDT 534
LSLLP+S+W++L+NLD+IK +N APFF+P++P L + + +
Sbjct: 754 LSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNNDPQQS 813
Query: 535 ESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 587
+ + +G + S F L + + +K PS ++ ELR L
Sbjct: 814 KVVNLGVLAQK----SDFCLKLEEGLVNNKYDTALNLLKESGPSGIETELRSL 862
Score = 214 (80.4 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 70/277 (25%), Positives = 127/277 (45%)
Query: 414 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIP 470
SNI Y+ S + + + +PS+ + G CQ ++ +V P D +Q+
Sbjct: 692 SNISLYSVVSLRPLPADYVPSIVMLPGTCQTQDV---EVSEETVEPSDELIEYDSPEQLN 748
Query: 471 D-LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSES 529
+ LVTLSLLP+S+W++L+NLD+IK +N APFF+P++P L +
Sbjct: 749 EQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNN 808
Query: 530 TKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQI 589
+ ++ + +G + S F L + + +K PS ++ ELR L
Sbjct: 809 DPQQSKVVNLGVLAQK----SDFCLKLEEGLVNNKYDTALNLLKESGPSGIETELRSLS- 863
Query: 590 IDHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKL 648
D ++ +L I ++LD + +FE QA + LFLK+H + + L
Sbjct: 864 --PDCGGSIEVMQSFLKMIGMMLDR-------KRDFELAQAYLALFLKLHLKMLPSEPVL 914
Query: 649 QDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 685
++ L W + +F + C++++L ++ L
Sbjct: 915 LEEITNLSSQVEENWTHLQSLFNQSMCILNYLKSALL 951
Score = 73 (30.8 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 32/149 (21%), Positives = 65/149 (43%)
Query: 264 NTLMISAGYHGDIKVWDFKGRDLKSR---WEVGCSLVKIVYHRVNGLLATVADDLVIRLF 320
N +++ + G +++W+ K L W+VG + ++ V+ + + VI +
Sbjct: 218 NKILLGSE-QGSLQLWNVKSNKLLYTFPGWKVGVTALQQA-PAVDVVAIGLMSGQVI-IH 274
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVI---LARQIDAIHVD 376
++ + KF IT F DG ++++G G + +WD+ L Q+ H
Sbjct: 275 NIKFNETLMKFRQDWGPITSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAH-S 333
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLWV 405
+I L+ +L T D N + +W+
Sbjct: 334 TAIAGLTFLHREPLLVTNGAD-NALRIWI 361
Score = 51 (23.0 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 21/82 (25%), Positives = 36/82 (43%)
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALS--L 384
+V F+GH I F G ++S DG L IW + + + D S+ +S L
Sbjct: 154 IVHTFKGHKAEI-HF-LQPFGDHIISVDTDGILIIWHIYSEEEYLQLTFDKSVFKISAIL 211
Query: 385 SPN--MDVLATAHVDQNGVYLW 404
P+ ++ + +Q + LW
Sbjct: 212 HPSTYLNKILLGS-EQGSLQLW 232
Score = 48 (22.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNL 32
+G + +AFS DG+ L+ S A I W+L
Sbjct: 622 QGQINDMAFSPDGRWLI-SAAMDCSIRTWDL 651
Score = 40 (19.1 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 21 GASSGVISIWNLEKRRL 37
G+ G + +WN++ +L
Sbjct: 223 GSEQGSLQLWNVKSNKL 239
>UNIPROTKB|F1PNT8 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 KO:K14554 OMA:DGIIACH CTD:134430
EMBL:AAEX03001970 RefSeq:XP_545992.2 ProteinModelPortal:F1PNT8
Ensembl:ENSCAFT00000011832 GeneID:488875 KEGG:cfa:488875
Uniprot:F1PNT8
Length = 891
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 208/593 (35%), Positives = 324/593 (54%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +T+++F +DG P++A+G+ G I +W+LE ++L + +R AH AI L F EP+L+
Sbjct: 230 GPITSISFRTDGHPIMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLV 289
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSV 121
+ ADN++++WIFD G+ RLLRFR GHSAP IR+Y NG+ ILSA QD + FS
Sbjct: 290 TNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKIRYYGQNGQQILSASQDGTLQSFST 349
Query: 122 IQDQQSRELSQRHVAKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQ 179
I ++ ++ L + K+ R P+ F E RE DW +++ CH
Sbjct: 350 IHEKFNKSLGHGLINKKKVKRKGLQNAMSVRLPPITKFAAEEARESDWDSIIACHQGKLS 409
Query: 180 AYVWRLQNFVLGEHILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
W Q +G + L+P ++ A I++CGNFAV+G + G ++ +N+QSGI R
Sbjct: 410 CSTWNYQRSTIGAYFLKPKELKKDDITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHR 469
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV 297
GS+ + + AH G V GVA D N L+I+AG G +K W+FK + L + S
Sbjct: 470 GSFGE-----DQAHKGSVRGVAVDGLNQLIITAGSEGLLKFWNFKNKILIHSMSLSSSPN 524
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++ HR +G+L DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD
Sbjct: 525 MMLLHRDSGILGLALDDFSICVLDIETRKIVREFSGHQGQINDLAFSPDGRWLISASMDC 584
Query: 358 SLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID 417
S+R WD+ ID+ VD + +++SP D LAT+HVD G+YLW N ++S
Sbjct: 585 SVRTWDLPSGCLIDSFLVDSAPLNVTMSPTGDFLATSHVDHLGIYLWSNISLYS------ 638
Query: 418 SYASGKEIVSVKMPSVSSVEG-CQDENS--SQPDVHRTDRVPKDSFGLPTFKQQIPDLVT 474
S + + + +P V + G CQ+E+ S+ + +D + + + P +Q LVT
Sbjct: 639 -VVSLRPLPTDYVPLVVMLPGTCQNEDVEFSEETIEPSDEMIE--YDSP--EQLNEQLVT 693
Query: 475 LSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDT 534
LSLLP+S+W++L+NLD+IK +N APFF+P+VP L + +
Sbjct: 694 LSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYAVPEQNNDPHQS 753
Query: 535 ESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 587
+ + +G + S F L + A + +K L PS ++ ELR L
Sbjct: 754 KVVNLGVLAQK----SDFCLKLEEGLVNNKYEAALNLLKELGPSGIETELRSL 802
Score = 225 (84.3 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 76/279 (27%), Positives = 130/279 (46%)
Query: 414 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRV--PKDSFGLPTFKQQ 468
SNI Y+ S + + + +P V + G CQ+E DV ++ P D +Q
Sbjct: 632 SNISLYSVVSLRPLPTDYVPLVVMLPGTCQNE-----DVEFSEETIEPSDEMIEYDSPEQ 686
Query: 469 IPD-LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPS 527
+ + LVTLSLLP+S+W++L+NLD+IK +N APFF+P+VP L
Sbjct: 687 LNEQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYAVPEQ 746
Query: 528 ESTKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 587
+ ++ + +G + S F L + A + +K L PS ++ ELR L
Sbjct: 747 NNDPHQSKVVNLGVLAQK----SDFCLKLEEGLVNNKYEAALNLLKELGPSGIETELRSL 802
Query: 588 QIIDHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHT 646
D +D +L I ++LD + +FE QA + LFLK+H + +
Sbjct: 803 S---PDCGGSVDIMQSFLKMIGIMLDK-------KRDFELAQAYLALFLKLHLKMLPSEP 852
Query: 647 KLQDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 685
L ++ KL W + +F + C+++++ ++ L
Sbjct: 853 VLLEEITKLSSQVEENWIHLQSLFNQSMCILNYIKSALL 891
Score = 71 (30.1 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 31/149 (20%), Positives = 64/149 (42%)
Query: 264 NTLMISAGYHGDIKVWDFKGRDLK---SRWEVGCSLVKIVYHRVNGLLATVADDLVIRLF 320
N +++ + G +++W+ K L W+ G + ++ V+ + + VI +
Sbjct: 158 NKILLGSE-QGTLQLWNIKSNKLLYTFQGWKFGVTALQQA-PAVDVVAVGLTSGQVI-IH 214
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVI---LARQIDAIHVD 376
++ + KF IT F DG ++++G G + +WD+ L Q+ H
Sbjct: 215 NIKFDETLMKFRQDWGPITSISFRTDGHPIMAAGSPCGHIGLWDLEDKKLINQMRNAH-S 273
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLWV 405
+I L+ +L T D N + +W+
Sbjct: 274 TAIAGLTFLHREPLLVTNGAD-NALRIWI 301
Score = 53 (23.7 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 19/91 (20%), Positives = 36/91 (39%)
Query: 21 GASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDG 80
G+ G + +WN++ +L + + +L P + + + I
Sbjct: 163 GSEQGTLQLWNIKSNKLLYTF-QGWKFGVTALQ---QAPAVDVVAVGLTSGQVIIHNIKF 218
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAG 111
D L++FR P I F +G I++AG
Sbjct: 219 DETLMKFRQDWG-PITSISFRTDGHPIMAAG 248
Score = 48 (22.0 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNL 32
+G + LAFS DG+ L+++ V + W+L
Sbjct: 562 QGQINDLAFSPDGRWLISASMDCSVRT-WDL 591
Score = 39 (18.8 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALS 383
+V ++GH I G ++S D L IW + + + D S+ +S
Sbjct: 94 VVHTYKGHKAEIR--LLQPFGDHVISVDTDSVLIIWHIYSEEEYLQLTFDKSVFKIS 148
Score = 37 (18.1 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 9/58 (15%), Positives = 26/58 (44%)
Query: 74 IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
+F + ++ GH A ++ + G H++S D ++ + +++ +L+
Sbjct: 84 VFSAFARNKEVVHTYKGHKAEIRLLQPF--GDHVISVDTDSVLIIWHIYSEEEYLQLT 139
>UNIPROTKB|F1RLI4 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 OMA:DGIIACH EMBL:CU972447
Ensembl:ENSSSCT00000015514 Uniprot:F1RLI4
Length = 952
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 214/619 (34%), Positives = 330/619 (53%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +T+++F +DG P++A+G+ G I +W+LE ++L + +R AH AI L F EP+L+
Sbjct: 290 GPITSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLV 349
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSV 121
+ ADN++++WIFD G+ RLLRFR GHSAP IR+Y NG+ ILSA QD + FS
Sbjct: 350 TNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKIRYYGQNGQQILSASQDGTLQSFST 409
Query: 122 IQDQQSRELSQRHVAKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQ 179
I ++ ++ L + K+ R P+ F E RE DW ++ CH
Sbjct: 410 IHEKFNKSLGHGLINKKRVKRKGLQNAMTVRLPPITEFAAEEARESDWDGIIACHQGKLS 469
Query: 180 AYVWRLQNFVLGEHILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
W Q +G + L+P ++ A I++CGNFAV+G + G I+ +N+QSGI R
Sbjct: 470 CSTWNYQRSTIGAYFLKPKELKKDDITATAVDITSCGNFAVIGLSSGTIDVYNMQSGIHR 529
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV 297
GS+ + AH G + GVA D N L ISAG G +K W+FK + L + S
Sbjct: 530 GSF-----GKDQAHKGSIRGVAVDGLNQLTISAGSEGLLKFWNFKNKILIHSVSLDSSPN 584
Query: 298 KIVYHR-VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
++ HR +G+L DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD
Sbjct: 585 MMLLHRDSSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISASMD 644
Query: 357 GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNI 416
S+R WD+ ID+ +D + +++SP D LAT+HVD G+YLW N ++S
Sbjct: 645 CSIRTWDLPSGCLIDSFLLDSAPLNVTMSPTGDFLATSHVDHLGIYLWSNISLYS----- 699
Query: 417 DSYASGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPD-LVT 474
S + + + +PSV + G CQ ++ + T+ P D +Q+ + LVT
Sbjct: 700 --VVSLRPLPTDYVPSVVMLPGTCQTQDIELSE-ETTE--PSDEMIAYDSPEQLNEQLVT 754
Query: 475 LSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDT 534
LSLLP+S+W++L+NLD+IK +N APFF+P+VP L + + +
Sbjct: 755 LSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYATPEQNNDPQQS 814
Query: 535 ESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDD 594
+ + +G + S F L + A +K L PS ++ ELR L D
Sbjct: 815 KVVNLGILAQK----SDFCLKLEEGLVNNKYEAALSLLKELGPSGIETELRSLS---PDC 867
Query: 595 HQELDKRPEYLS-IELLLD 612
++ +L IE++LD
Sbjct: 868 GGSIEVMKSFLKMIEMMLD 886
Score = 240 (89.5 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 76/277 (27%), Positives = 131/277 (47%)
Query: 414 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIP 470
SNI Y+ S + + + +PSV + G CQ ++ + T+ P D +Q+
Sbjct: 693 SNISLYSVVSLRPLPTDYVPSVVMLPGTCQTQDIELSE-ETTE--PSDEMIAYDSPEQLN 749
Query: 471 D-LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSES 529
+ LVTLSLLP+S+W++L+NLD+IK +N APFF+P+VP L +
Sbjct: 750 EQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYATPEQNN 809
Query: 530 TKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQI 589
+ ++ + +G + S F L + A +K L PS ++ ELR L
Sbjct: 810 DPQQSKVVNLGILAQK----SDFCLKLEEGLVNNKYEAALSLLKELGPSGIETELRSLS- 864
Query: 590 IDHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKL 648
D ++ +L IE++LD + +FE QA + LFLK+H + + L
Sbjct: 865 --PDCGGSIEVMKSFLKMIEMMLDR-------KRDFELAQAYLALFLKLHLKMLPSEPVL 915
Query: 649 QDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 685
++ KL W + +F + CV++++ ++ L
Sbjct: 916 LEEVTKLSSQLEETWIHLQSLFNQSMCVLNYIKSALL 952
Score = 72 (30.4 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 38/180 (21%), Positives = 79/180 (43%)
Query: 236 SRGSYLDMS-ERSNYAHNGEVVGVACDST--NTLMISAGYHGDIKVWDFKGRDLK---SR 289
S YL +S ++S + ++ + ST N +++ + G +++W+ K L +
Sbjct: 191 SEEEYLQLSFDKSVF----KISAILHPSTYLNKILLGSE-QGSLQLWNVKSNKLLYTFAG 245
Query: 290 WEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKW 349
W+ G + ++ V+ + + VI + ++ + KF IT F DG
Sbjct: 246 WKTGVTALQQA-PAVDVVAVGLMSGQVI-IHNIKFDETLMKFRQDWGPITSISFRTDGHP 303
Query: 350 LLSSGMD-GSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWV 405
++++G G + +WD+ L Q+ H +I L+ +L T D N + +W+
Sbjct: 304 VMAAGSPCGHIGLWDLEDKKLINQMRNAH-STAIAGLTFLHREPLLVTNGAD-NALRIWI 361
Score = 47 (21.6 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 18/91 (19%), Positives = 34/91 (37%)
Query: 21 GASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDG 80
G+ G + +WN++ +L + +L V+ + I
Sbjct: 223 GSEQGSLQLWNVKSNKLLYTFA-GWKTGVTALQQAPAVDVVAVGLMSGQV---IIHNIKF 278
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAG 111
D L++FR P I F +G +++AG
Sbjct: 279 DETLMKFRQDWG-PITSISFRTDGHPVMAAG 308
Score = 46 (21.3 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNL 32
+G + +AFS DG+ L+++ I W+L
Sbjct: 623 QGQINDMAFSPDGRWLISASMDCS-IRTWDL 652
Score = 45 (20.9 bits), Expect = 8.9e-16, Sum P(3) = 8.9e-16
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALS--L 384
+V F+GH I G ++S D L IW + + + D S+ +S L
Sbjct: 154 VVHTFKGHKAEI--HLLQPFGDHVISVDTDSVLIIWHIYSEEEYLQLSFDKSVFKISAIL 211
Query: 385 SPN--MDVLATAHVDQNGVYLW 404
P+ ++ + +Q + LW
Sbjct: 212 HPSTYLNKILLGS-EQGSLQLW 232
Score = 41 (19.5 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 172 TCHMDTAQAYVWRLQNFVLGEHILRP 197
+C D+ +++ W+L+ LG LRP
Sbjct: 2 SCTEDSLRSHDWQLEPEALGS--LRP 25
Score = 38 (18.4 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
GH A ++ + G H++S D ++ + +++ +LS
Sbjct: 160 GHKAEIHLLQPF--GDHVISVDTDSVLIIWHIYSEEEYLQLS 199
>RGD|1586463 [details] [associations]
symbol:Wdr36 "WD repeat domain 36" species:10116 "Rattus
norvegicus" [GO:0001895 "retina homeostasis" evidence=ISO]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030516 "regulation
of axon extension" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:1586463
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GeneTree:ENSGT00390000004976 IPI:IPI00766595
PRIDE:F1MA04 Ensembl:ENSRNOT00000031530 Uniprot:F1MA04
Length = 882
Score = 893 (319.4 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 210/619 (33%), Positives = 328/619 (52%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +T+++F +DG P++A+G+ G I +W+LE ++L + +R AH AI L F EP+L+
Sbjct: 236 GPITSISFRTDGHPIMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAISGLTFLHREPLLV 295
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSV 121
+ ADN++++WIFD G+ RLLR R GHSA IR+Y NG+ ILSA QD + FS
Sbjct: 296 TNGADNALRIWIFDGPTGEGRLLRLRMGHSASLTKIRYYGQNGQQILSASQDGTLQSFST 355
Query: 122 IQDQQSRELSQRHVAKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQ 179
+ ++ ++ L V K+ R P+ F E R+ DW V+ CH
Sbjct: 356 VHEKFNKSLGHGLVNKKIVKRKGLQNTMSVRLPPITQFAAEEARQSDWDGVIACHQGKLS 415
Query: 180 AYVWRLQNFVLGEHILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
W Q +G + L+P N A I++CGNFA++G + G ++ +N+QSGI R
Sbjct: 416 CSTWNYQRSTIGAYFLKPKNVKANSATATAVDITSCGNFAIIGLSSGAVDVYNMQSGIHR 475
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV 297
GS+ D E+ AH G V GVA D N L I+AG +K W+FK + L +
Sbjct: 476 GSFGD--EK---AHAGSVRGVAVDGLNQLAITAGSERLLKFWNFKSKVLVHSLSLDSPPN 530
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++ HR +G+L DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD
Sbjct: 531 VMLLHRDSGILGLALDDFSITVLDIETRKIVREFSGHQGQINDMTFSPDGRWLISAAMDC 590
Query: 358 SLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID 417
S+R WD+ ID +D + +++SP D LAT+HVD G+YLW N ++S
Sbjct: 591 SVRTWDLPSGCLIDCFLLDSAPLNVTMSPTGDFLATSHVDHLGIYLWSNISLYS------ 644
Query: 418 SYASGKEIVSVKMPSVSSVEG-CQDEN--SSQPDVHRTDRVPKDSFGLPTFKQQIPDLVT 474
S + + +PSV + G CQ + + + + +D + + + P +Q LVT
Sbjct: 645 -VVSLRPLPPDYVPSVLMLPGTCQTQGLEALEEQIEPSDEMIE--YESP--EQLNEQLVT 699
Query: 475 LSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDT 534
LSLLP+S+W++L+NLD+IK +N APFF+P+VP L S + +
Sbjct: 700 LSLLPESRWKNLLNLDVIKKKNKPKEPPKVPQSAPFFIPTVPGLVPRFAVPEPTSDPQQS 759
Query: 535 ESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDD 594
+ + +G + S F L + + + +K L PS ++ ELR L +D
Sbjct: 760 KVVNLGILAQK----SNFYLKLEEGLQNNQYEGALNLLKELGPSGIETELRNLS---PED 812
Query: 595 HQELDKRPEYLS-IELLLD 612
++ +LS I ++LD
Sbjct: 813 GGSIEAMRSFLSMIGVMLD 831
Score = 196 (74.1 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 67/231 (29%), Positives = 111/231 (48%)
Query: 414 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRV-PKDSFGLPTFKQQI 469
SNI Y+ S + + +PSV + G CQ + + +++ P D +Q+
Sbjct: 638 SNISLYSVVSLRPLPPDYVPSVLMLPGTCQTQGLEALE----EQIEPSDEMIEYESPEQL 693
Query: 470 PD-LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSE 528
+ LVTLSLLP+S+W++L+NLD+IK +N APFF+P+VP L
Sbjct: 694 NEQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPQSAPFFIPTVPGLVPRFAVPEPT 753
Query: 529 STKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQ 588
S + ++ + +G + S F L + + + +K L PS ++ ELR L
Sbjct: 754 SDPQQSKVVNLGILAQK----SNFYLKLEEGLQNNQYEGALNLLKELGPSGIETELRNLS 809
Query: 589 IIDHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIH 638
+D ++ +LS I ++LD + +FE QA + LFLK+H
Sbjct: 810 ---PEDGGSIEAMRSFLSMIGVMLDR-------KRDFELAQAYLALFLKLH 850
Score = 75 (31.5 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 31/139 (22%), Positives = 60/139 (43%)
Query: 274 GDIKVWDFKGRDLKSR---WEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRK 330
G +++W+ K L W+VG + ++ + V+ +VI ++ + K
Sbjct: 173 GSLQLWNIKSNKLLYTFPGWKVGVTALQQAPAVDVVAIGLVSGQVVIH--NIKFDETLMK 230
Query: 331 FEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVI---LARQIDAIHVDVSITALSLSP 386
F IT F DG ++++G G + +WD+ L Q+ H +I+ L+
Sbjct: 231 FHQDWGPITSISFRTDGHPIMAAGSPCGHIGLWDLEDKKLINQMRNAH-STAISGLTFLH 289
Query: 387 NMDVLATAHVDQNGVYLWV 405
+L T D N + +W+
Sbjct: 290 REPLLVTNGAD-NALRIWI 307
Score = 52 (23.4 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 348 KWLLSSGMDGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLA 392
K LL S GSL++W++ + + V +TAL +P +DV+A
Sbjct: 165 KVLLGSEQ-GSLQLWNIKSNKLLYTFPGWKVGVTALQQAPAVDVVA 209
Score = 44 (20.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 19/81 (23%), Positives = 32/81 (39%)
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALS--L 384
+V F+GH I G ++S D L IW + + + D S+ +S L
Sbjct: 100 IVHTFKGHKAEI--HLLQPFGDHVISVDTDSVLIIWHIYSEEEYLQLTFDKSVFKISTIL 157
Query: 385 SPNMDV-LATAHVDQNGVYLW 404
P+ + +Q + LW
Sbjct: 158 HPSTYLNKVLLGSEQGSLQLW 178
Score = 43 (20.2 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNL 32
+G + + FS DG+ L+ S A + W+L
Sbjct: 568 QGQINDMTFSPDGRWLI-SAAMDCSVRTWDL 597
Score = 41 (19.5 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 21 GASSGVISIWNLEKRRL 37
G+ G + +WN++ +L
Sbjct: 169 GSEQGSLQLWNIKSNKL 185
>FB|FBgn0038146 [details] [associations]
symbol:CG9799 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040 EMBL:AY052114
ProteinModelPortal:Q960D6 SMR:Q960D6 STRING:Q960D6 PaxDb:Q960D6
PRIDE:Q960D6 FlyBase:FBgn0038146 InParanoid:Q960D6
OrthoDB:EOG4KD521 ArrayExpress:Q960D6 Bgee:Q960D6 Uniprot:Q960D6
Length = 922
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 222/698 (31%), Positives = 360/698 (51%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G VT L+F +DG P+L S S+G ++ WNLE+R+L + +AH+ ++ + +EPV+
Sbjct: 246 GQVTNLSFRTDGPPILVSACSNGYMAFWNLEERKLAGQL-QAHEESVTTAICLPSEPVVF 304
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAFRLFSV 121
+ S DNS++M++FD DG R LR R GH+ PP CIR++ ++G ILS+G+D R+FS
Sbjct: 305 TTSPDNSMRMFVFDMPDGGARQLRIREGHTKPPFCIRYHGSSGVSILSSGEDSTMRVFST 364
Query: 122 IQDQQSRELSQRHVAKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQ 179
I + ++ + + +A + P++ F RE++W N+ H Q
Sbjct: 365 ISESLNKSMGRATYNPKATKKKNRFEHDKFGMPPILEFTSDTAREKEWDNIAAIHAGVIQ 424
Query: 180 AYVWRLQNFVLGEHILRPCP---ENPTAVK---ACTI-SACGNFAVLGTAGGWIERFNLQ 232
A W +GEH L P N T + C + + CGNF ++G + G IERFN+Q
Sbjct: 425 ATTWSFGKNRMGEHRLVPKQFQNSNRTNFQNETTCIVLTHCGNFVIIGYSSGDIERFNIQ 484
Query: 233 SGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS---- 288
SG+ R +Y + AH V G+A D+ N +IS G +K W FKG+ K
Sbjct: 485 SGLHRATY------GSPAHKMAVRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATL 538
Query: 289 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
R G +L+++ HR + +LA + I + D+ +VRKF GHT ++ D FS D +
Sbjct: 539 RLADGIALIRL--HRESSMLAIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTFSPDSR 596
Query: 349 WLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRC 408
WL+++ MD ++++WD+ + +D V+ +LS+SPN D LATAHV G+YLW N+
Sbjct: 597 WLITAAMDSTIKVWDIPSSYMVDHFRVEAPCVSLSMSPNGDFLATAHVGLLGIYLWANKT 656
Query: 409 MFSGDS--NIDSYASGKEI-VSVKMPSVSSVE-GCQDENSSQPDVHRTDRVPKDSFGLPT 464
+F+ S +ID + + + +E G ++ + D + + + PT
Sbjct: 657 LFNQISLRSIDPLELAPYVGLPTNVCDAMELEDGMKELEIDEEDESKLGELVDTKYETPT 716
Query: 465 FKQQIPDLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILF 524
Q +L+TLS L S+WQ+L++L++IK RN APFFLP+V L E+ F
Sbjct: 717 --QLSEELITLSGLAASRWQNLLDLELIKQRNKPKAPPKAPKQAPFFLPTVSGL--ELRF 772
Query: 525 KPSESTKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMEL 584
KE+ ES ++ K ++ F QLL A+ +F++ ++ L PS +D E+
Sbjct: 773 DVENGQKEEDES-RI-RKASTLNNLTAFGQLLEETADSLDFASAVAHLTQLGPSMVDFEI 830
Query: 585 RMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRC 644
+ L H E L++ L + NFE Q+ + +FL+ HG +
Sbjct: 831 KSL-------HPEAGGT--LLAMLQFLKLVKFMFGTNLNFELAQSYLSVFLRSHGLGLTE 881
Query: 645 HTKLQDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSN 682
L + R + +VQ WQ++++ VV+ L N
Sbjct: 882 FPDLVKELRTVSQVQQEAWQRVEEKLIYGTGVVAALRN 919
>ZFIN|ZDB-GENE-030131-464 [details] [associations]
symbol:wdr36 "WD repeat domain 36" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-464
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 HOVERGEN:HBG059718 EMBL:BC164036
IPI:IPI00481400 UniGene:Dr.4799 ProteinModelPortal:B5DDC5
STRING:B5DDC5 ArrayExpress:B5DDC5 Uniprot:B5DDC5
Length = 904
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 205/592 (34%), Positives = 315/592 (53%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +TAL+F +DG P++ASG+ G I +W+LE+++L S +R+AH AI L F NEP+L+
Sbjct: 242 GPITALSFRTDGHPIMASGSPIGHIGLWDLEEKKLVSQMRDAHTTAIAGLTFLQNEPLLI 301
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAFRLFSV 121
+ ADN+I++WIFD GD RLLR R GHSAPP IR Y +G +ILSAGQD + FS
Sbjct: 302 TNGADNAIRVWIFDVAGGDGRLLRQRMGHSAPPTKIRHYDQSGLNILSAGQDGTLQSFST 361
Query: 122 IQDQQSRELSQRHVAK-RARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQA 180
+ ++ ++ L + K +A+ + F R+ DW ++ CH
Sbjct: 362 VHERFNKSLGHGTLNKAKAKKKGVKYDTAKLPSITTFASETARQSDWDGIIACHRGFLMT 421
Query: 181 YVWRLQNFVLGEHILRPCPENPTA-----VKACTISACGNFAVLGTAGGWIERFNLQSGI 235
W Q +G H L P N A IS+CGNFAV+ + G I+ +N+QSG+
Sbjct: 422 TSWNYQKGSMGAHKLEPERFNRNRSLNVHATAVDISSCGNFAVIALSSGHIDVYNMQSGL 481
Query: 236 SRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS 295
RG Y + + AH G V GVA D+ N L S G +K+W FK ++ + +
Sbjct: 482 HRGHYGE-----DKAHEGPVRGVAVDALNQLTFSVGADHLLKIWKFKSKEHLHTHRLPAA 536
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ HR +G+LA D I + DV R+VRKF GH +I D FS DG+WL+++ M
Sbjct: 537 PASSLLHRDSGMLAIALDVFAIHILDVETRRIVRKFSGHRGQINDMTFSPDGRWLITASM 596
Query: 356 DGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSN 415
D ++R WD+ +D V+ + ++SLSP + LA++HVD GVYLW N + S S
Sbjct: 597 DCTIRTWDLPSGSLVDCFLVEAAAVSVSLSPTGNFLASSHVDGLGVYLWSNNTLCSLVS- 655
Query: 416 IDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTL 475
+ + E + +P + C +++ + +V +D + P Q LVTL
Sbjct: 656 LRPLPADYEPTVIMLPGI-----CPSKDTEEEEVLDSDSSEMAEYISPA--QLDEHLVTL 708
Query: 476 SLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTE 535
SLLP S+W++L++LDIIK +N APFF+P++P L + P+ ++ ++
Sbjct: 709 SLLPDSRWKNLLHLDIIKKKNKPKEPPKVPKAAPFFIPTIPGLVPQFSL-PNTPSEAQSK 767
Query: 536 SLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 587
+ +G + S F L + E ++ ++ L PS ++ ELR L
Sbjct: 768 VVNLGVLAQK----SNFYIELENAIESNSYEEPVKLLRELGPSAIETELRAL 815
Score = 213 (80.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 62/256 (24%), Positives = 121/256 (47%)
Query: 431 PSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLINL 489
P+V + G C +++ + +V +D + P Q LVTLSLLP S+W++L++L
Sbjct: 665 PTVIMLPGICPSKDTEEEEVLDSDSSEMAEYISPA--QLDEHLVTLSLLPDSRWKNLLHL 722
Query: 490 DIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIPV 549
DIIK +N APFF+P++P L + P+ ++ ++ + +G +
Sbjct: 723 DIIKKKNKPKEPPKVPKAAPFFIPTIPGLVPQFSL-PNTPSEAQSKVVNLGVLAQK---- 777
Query: 550 SQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIEL 609
S F L + E ++ ++ L PS ++ ELR L D ++ +L +
Sbjct: 778 SNFYIELENAIESNSYEEPVKLLRELGPSAIETELRALS---PDMGGDVGVMKSFLKMIS 834
Query: 610 LLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLLEVQSAVWQKIDKM 669
+ + + +F+ QA + LFLK+H + +L ++A ++ W I +
Sbjct: 835 CI------LKSKKDFDLAQAYLALFLKLHLRLISDEPELMEEAERVSAQLEETWMCIQTL 888
Query: 670 FQSARCVVSFLSNSQL 685
+ C++S++ ++ L
Sbjct: 889 LNQSICLLSYIKSALL 904
Score = 88 (36.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 41/180 (22%), Positives = 82/180 (45%)
Query: 236 SRGSYLDMS-ERSNYAHNGEVVGVACDST--NTLMISAGYHGDIKVWDFKGRDLK---SR 289
S +YL +S +++++ EV + ST N ++ + G +++W+ K L S
Sbjct: 143 SEDTYLQISYDKASF----EVSALMHPSTYLNKILFGSS-QGSLQLWNIKSNKLLFTFSG 197
Query: 290 WEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKW 349
W ++++ V+ + +A +I + ++ + KF+ IT F DG
Sbjct: 198 WSAAVTVLQQT-PAVDVVGVGLASGQII-IHNIKFDETLMKFQQDWGPITALSFRTDGHP 255
Query: 350 LLSSGMD-GSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWV 405
+++SG G + +WD+ L Q+ H +I L+ N +L T D N + +W+
Sbjct: 256 IMASGSPIGHIGLWDLEEKKLVSQMRDAHT-TAIAGLTFLQNEPLLITNGAD-NAIRVWI 313
Score = 53 (23.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 24/107 (22%), Positives = 42/107 (39%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V+AL S + G+S G + +WN++ +L A+ L V+
Sbjct: 159 VSALMHPSTYLNKILFGSSQGSLQLWNIKSNKLLFTF-SGWSAAVTVLQQTPAVDVVGVG 217
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 111
A I I D L++F+ P + F +G I+++G
Sbjct: 218 LASGQI---IIHNIKFDETLMKFQQDWG-PITALSFRTDGHPIMASG 260
Score = 50 (22.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRL-QSVIREAHDNAIISLHFFANEPV 60
RG + + FS DG+ L+ + I W+L L + EA A +S+
Sbjct: 576 RGQINDMTFSPDGRWLITASMDC-TIRTWDLPSGSLVDCFLVEA---AAVSVSLSPTGNF 631
Query: 61 LMSASADN-SIKMWIFDT 77
L S+ D + +W +T
Sbjct: 632 LASSHVDGLGVYLWSNNT 649
Score = 37 (18.1 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G L+S D + IWDV
Sbjct: 124 GNHLISVDKDNVVIIWDV 141
>CGD|CAL0005566 [details] [associations]
symbol:UTP21 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0034388 "Pwp2p-containing subcomplex
of 90S preribosome" evidence=IEA] [GO:0005816 "spindle pole body"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005566
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0006364 GO:GO:0032040 KO:K14554
RefSeq:XP_722467.1 RefSeq:XP_722608.1 ProteinModelPortal:Q5ALL2
STRING:Q5ALL2 GeneID:3635757 GeneID:3635913 KEGG:cal:CaO19.1566
KEGG:cal:CaO19.9139 Uniprot:Q5ALL2
Length = 942
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 210/705 (29%), Positives = 339/705 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA---IISLHFFANEPVL 61
V +++F +DG P L +G ++G + ++L+K+ V+R AH + + F +P++
Sbjct: 264 VASISFRTDGAPHLVAGLNNGDLYFYDLDKKSRVHVLRNAHKETHGGVANAKFLNGQPIV 323
Query: 62 MSASADNSIKMWIFD---TTDGD-----PRLLRFRSGHSAPPLCIRFYANGR-H-ILSAG 111
+S DN +K ++FD TT PR LR R GHSAPP+ I F + H +LSA
Sbjct: 324 LSNGGDNHLKEFVFDPNLTTSNSSIVPPPRHLRSRGGHSAPPVAIEFPQEDKTHFLLSAS 383
Query: 112 QDRAFRLFSVIQDQQSRELSQRHVAKR--ARXXXXXXXXXXXXP-VIAFDCAEIRERDWC 168
+D+ F FS+ +D Q++E+SQR + R P +I+ + RE DW
Sbjct: 384 RDKTFWTFSLRKDAQAQEMSQRLQKSKDGKRQAGQVVSMREKFPEIISISSSYAREGDWE 443
Query: 169 NVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIER 228
N++T H D A W +N +G H+L VK+ +S CGNF ++G++ G I
Sbjct: 444 NIITAHKDETFARTWDSRNKRVGRHLLNTIDGG--IVKSVCVSQCGNFGLVGSSSGGIGS 501
Query: 229 FNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS 288
+NLQSG+ R Y+ H V G+A D N M+S G G + +DF
Sbjct: 502 YNLQSGLLRKKYV--------LHKQAVTGLAIDGMNRKMVSCGLDGIVGFYDFGKSVYLG 553
Query: 289 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ ++ + ++YH+ + L+A DDL I + DV +++R GHT+RI+ FS DG+
Sbjct: 554 KLQLEAPITSMIYHKSSDLVACALDDLSIVVIDVTTQKVIRILYGHTNRISGMDFSPDGR 613
Query: 349 WLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRC 408
W++S +D +LR WD+ ID + + + TA+ SP D+LAT HV NGV LW NR
Sbjct: 614 WIVSVALDSTLRTWDLPTGGCIDGVILPIVATAVKFSPIGDILATTHVSGNGVSLWTNRA 673
Query: 409 MFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQ 468
F S + E ++ +P+ S G + + D + + T Q
Sbjct: 674 QFKPVST--RHVEEDEFSTILLPNASGDGGSTMLDGFLDEDSNEDGTIDEQY---TSAAQ 728
Query: 469 IP-DLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILF--- 524
I L+TLS P+S++ +L++LD IK ++ APFFL G+
Sbjct: 729 IDASLITLSSEPRSKFNTLLHLDTIKQQSKPKEAPKKPENAPFFLQLTGQAVGDRASVAE 788
Query: 525 -KPSESTK---EDTES-LKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPST 579
K SE T E+T S L+ + S+F +LL E F F Y+ +LSP+
Sbjct: 789 GKTSEQTNNTVEETNSKLRKLDTNGNHAFESEFTKLLREAGESGQFERFLTYLLNLSPAV 848
Query: 580 LDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHG 639
LD+E+R L + L + ++ L + N+E + + +F IHG
Sbjct: 849 LDLEIRSL-----NSFVPLTEMTNFIQA------LNAGLKSNANYEIWETLYAMFFNIHG 897
Query: 640 ETVRC---HTKLQDKARKLLEVQSAVWQKIDKMFQSARCVVSFLS 681
+ + T L + + ++ K+D + + +VSF+S
Sbjct: 898 DVIHQFENETSLHEALEEYRQLNDEKNNKMDSLVKYCASIVSFIS 942
>UNIPROTKB|Q5ALL2 [details] [associations]
symbol:UTP21 "Putative uncharacterized protein UTP21"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005566
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0006364 GO:GO:0032040 KO:K14554
RefSeq:XP_722467.1 RefSeq:XP_722608.1 ProteinModelPortal:Q5ALL2
STRING:Q5ALL2 GeneID:3635757 GeneID:3635913 KEGG:cal:CaO19.1566
KEGG:cal:CaO19.9139 Uniprot:Q5ALL2
Length = 942
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 210/705 (29%), Positives = 339/705 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA---IISLHFFANEPVL 61
V +++F +DG P L +G ++G + ++L+K+ V+R AH + + F +P++
Sbjct: 264 VASISFRTDGAPHLVAGLNNGDLYFYDLDKKSRVHVLRNAHKETHGGVANAKFLNGQPIV 323
Query: 62 MSASADNSIKMWIFD---TTDGD-----PRLLRFRSGHSAPPLCIRFYANGR-H-ILSAG 111
+S DN +K ++FD TT PR LR R GHSAPP+ I F + H +LSA
Sbjct: 324 LSNGGDNHLKEFVFDPNLTTSNSSIVPPPRHLRSRGGHSAPPVAIEFPQEDKTHFLLSAS 383
Query: 112 QDRAFRLFSVIQDQQSRELSQRHVAKR--ARXXXXXXXXXXXXP-VIAFDCAEIRERDWC 168
+D+ F FS+ +D Q++E+SQR + R P +I+ + RE DW
Sbjct: 384 RDKTFWTFSLRKDAQAQEMSQRLQKSKDGKRQAGQVVSMREKFPEIISISSSYAREGDWE 443
Query: 169 NVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIER 228
N++T H D A W +N +G H+L VK+ +S CGNF ++G++ G I
Sbjct: 444 NIITAHKDETFARTWDSRNKRVGRHLLNTIDGG--IVKSVCVSQCGNFGLVGSSSGGIGS 501
Query: 229 FNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS 288
+NLQSG+ R Y+ H V G+A D N M+S G G + +DF
Sbjct: 502 YNLQSGLLRKKYV--------LHKQAVTGLAIDGMNRKMVSCGLDGIVGFYDFGKSVYLG 553
Query: 289 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ ++ + ++YH+ + L+A DDL I + DV +++R GHT+RI+ FS DG+
Sbjct: 554 KLQLEAPITSMIYHKSSDLVACALDDLSIVVIDVTTQKVIRILYGHTNRISGMDFSPDGR 613
Query: 349 WLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRC 408
W++S +D +LR WD+ ID + + + TA+ SP D+LAT HV NGV LW NR
Sbjct: 614 WIVSVALDSTLRTWDLPTGGCIDGVILPIVATAVKFSPIGDILATTHVSGNGVSLWTNRA 673
Query: 409 MFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQ 468
F S + E ++ +P+ S G + + D + + T Q
Sbjct: 674 QFKPVST--RHVEEDEFSTILLPNASGDGGSTMLDGFLDEDSNEDGTIDEQY---TSAAQ 728
Query: 469 IP-DLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILF--- 524
I L+TLS P+S++ +L++LD IK ++ APFFL G+
Sbjct: 729 IDASLITLSSEPRSKFNTLLHLDTIKQQSKPKEAPKKPENAPFFLQLTGQAVGDRASVAE 788
Query: 525 -KPSESTK---EDTES-LKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPST 579
K SE T E+T S L+ + S+F +LL E F F Y+ +LSP+
Sbjct: 789 GKTSEQTNNTVEETNSKLRKLDTNGNHAFESEFTKLLREAGESGQFERFLTYLLNLSPAV 848
Query: 580 LDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHG 639
LD+E+R L + L + ++ L + N+E + + +F IHG
Sbjct: 849 LDLEIRSL-----NSFVPLTEMTNFIQA------LNAGLKSNANYEIWETLYAMFFNIHG 897
Query: 640 ETVRC---HTKLQDKARKLLEVQSAVWQKIDKMFQSARCVVSFLS 681
+ + T L + + ++ K+D + + +VSF+S
Sbjct: 898 DVIHQFENETSLHEALEEYRQLNDEKNNKMDSLVKYCASIVSFIS 942
>SGD|S000004401 [details] [associations]
symbol:UTP21 "Subunit of U3-containing 90S preribosome and
SSU processome" species:4932 "Saccharomyces cerevisiae" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA;IGI] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IC] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SGD:S000004401
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 EMBL:BK006945 InterPro:IPR011047 SUPFAM:SSF50998
EMBL:U19729 GO:GO:0006364 GO:GO:0032040 GO:GO:0042274 GO:GO:0034388
PIR:S55965 RefSeq:NP_013513.3 RefSeq:NP_058174.3
ProteinModelPortal:Q06078 SMR:Q06078 DIP:DIP-6416N IntAct:Q06078
MINT:MINT-561636 STRING:Q06078 PaxDb:Q06078 PeptideAtlas:Q06078
EnsemblFungi:YLR409C GeneID:851125 GeneID:851128 KEGG:sce:YLR409C
KEGG:sce:YLR410W-B CYGD:YLR409c GeneTree:ENSGT00390000004976
HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH OrthoDB:EOG46T68Q
NextBio:967857 Genevestigator:Q06078 GermOnline:YLR409C
Uniprot:Q06078
Length = 939
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 212/699 (30%), Positives = 339/699 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA---IISLHFFANEPVL 61
+++L+F +DG L+ G SSG + ++L++R V++ H + + F +P++
Sbjct: 251 ISSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPII 310
Query: 62 MSASADNSIKMWIFDTT----DGD-----PRLLRFRSGHSAPPLCIRFYANGRH-ILSAG 111
+++ DNS+K ++FD + GD PR LR R GHS PP I F + H +LSA
Sbjct: 311 VTSGGDNSLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIAFADSQSHFMLSAS 370
Query: 112 QDRAFRLFSVIQDQQSRELSQRHVAKRARXXXXXXXXXXXXP-VIAFDCAEIRERDWCNV 170
+DR+ FS+ +D QS+E+SQR K+ P ++A R +W N+
Sbjct: 371 KDRSLWSFSLRKDAQSQEMSQRLHKKQDGGRVGGSTIKSKFPEIVALAIENARIGEWENI 430
Query: 171 VTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFN 230
+T H D A W ++N +G + VK+ +S CGNF +G++ G I +N
Sbjct: 431 ITAHKDEKFARTWDMRNKRVGRWTFDTTDDG--FVKSVAMSQCGNFGFIGSSNGSITIYN 488
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW 290
+QSGI R Y H V G++ D N M+S G G + +DF L +
Sbjct: 489 MQSGILRKKYK--------LHKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKSTLLGKL 540
Query: 291 EVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWL 350
++ + +VYHR + L A DDL I + D V R+VR+ GH++RIT F FS +G+W+
Sbjct: 541 KLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWI 600
Query: 351 LSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMF 410
+S+ +D ++R WD+ ID I VD T + SPN D+LAT HV NG+ +W NR F
Sbjct: 601 VSASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIWTNRAQF 660
Query: 411 SGDSN--IDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQ 468
S ID E + +PS +SV G S + + + + F T +Q
Sbjct: 661 KTVSTRTIDE----SEFARMALPS-TSVRGNDSMLSGALESNGGEDLNDIDFNTYTSLEQ 715
Query: 469 IP-DLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLP-SVPSLSGEILFK- 525
I +L+TLS+ P+S+ +L++LD+I+ R+ PFFL S + E +
Sbjct: 716 IDKELLTLSIGPRSKMNTLLHLDVIRKRSKPKEAPKKSEKLPFFLQLSGEKVGDEASVRE 775
Query: 526 ------PSESTKEDTESLKV------GNKTKPDIPV---SQFIQLLHSCAEMKNFSAFTD 570
P E + D E+ K NK K + S F + L ++ K++S+
Sbjct: 776 GIAHETPEEIHRRDQEAQKKLDAEEQMNKFKVTGRLGFESHFTKQLREGSQSKDYSSLLA 835
Query: 571 YIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAV 630
+ + SP+ +D+E+R L + D I +D L + NFE +
Sbjct: 836 TLINFSPAAVDLEIRSLNSFEPFDE-----------IVWFIDALTQGLKSNKNFELYETF 884
Query: 631 IRLFLKIHGETVRCHTKLQDKARKLLEVQSAVWQKIDKM 669
+ L K HG+ + + K QD A L + V +K D++
Sbjct: 885 MSLLFKAHGDVIHANNKNQDIASALQNWED-VHKKEDRL 922
>ASPGD|ASPL0000018270 [details] [associations]
symbol:AN8293 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040 HOGENOM:HOG000217777
ProteinModelPortal:C8V3R6 EnsemblFungi:CADANIAT00004354 OMA:SSVECVE
Uniprot:C8V3R6
Length = 938
Score = 543 (196.2 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 149/445 (33%), Positives = 224/445 (50%)
Query: 158 DCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFA 217
D + W ++VT H A W G + + T VK+ IS CG FA
Sbjct: 498 DTTASNKTGWESIVTGHRGDKYARTWFWGKKKAGRWVFET--GDGTDVKSVAISQCGTFA 555
Query: 218 VLGTAGGWIERFNLQSGISRGSY------LDMSERSNYA-------HNGEVVGVACDSTN 264
V+G+AGG I FN+QSG R SY D+ Y+ H V G+A DS N
Sbjct: 556 VVGSAGGSIRLFNMQSGQYRRSYPCQKTKYDLGGEVRYSNKQIHTQHTKSVTGLAIDSLN 615
Query: 265 TLMISAGYHGDIKVWDFK-GRDLKSR-WEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 322
++S G G +K WDF+ G +K W ++ + Y+ ++ L+A DDL IR+ D+
Sbjct: 616 RTVLSCGLDGKVKFWDFQSGLLIKELDWYPMTAITALRYNSMSELVAFSCDDLSIRVVDM 675
Query: 323 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITAL 382
++VR+ G +I DF FS DG+W++++ MD +R+WD+ ID V + T+L
Sbjct: 676 ETKKIVRELWGCAGQINDFIFSSDGRWIIAASMDSIIRVWDLPTGHLIDLFRVSSTCTSL 735
Query: 383 SLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDE 442
++SP D LATAH D G+ LW NR +F S D ++ +P+ SS EG
Sbjct: 736 AMSPTGDFLATAHADGVGIGLWSNRSLFIPVSTRDLNVDN--LLDTGLPT-SSGEGGVGI 792
Query: 443 NSSQPDVHRTDRVPKDSFGLPTFKQQIP-DLVTLSLLPKSQWQSLINLDIIKARNXXXXX 501
+ + D D G + +Q+ D++TLS++PK++WQ+L+++D+IK RN
Sbjct: 793 IEA---AFQQDNEEHDGDGPISCTEQLDRDMLTLSVVPKNKWQTLVHMDLIKERNMPKEP 849
Query: 502 XXXXXXAPFFLPSVPSLSGEILFKPSESTKED---TESLKVGNK--TKPDIPVSQFIQLL 556
APFFLP+ P+ G + + E+ TES +V TK VS+F LL
Sbjct: 850 PKRPEKAPFFLPA-PASDGAPKHNANATLLEEGKLTESSRVAKLQITKNPNAVSRFTSLL 908
Query: 557 HSCAEMKNFSAFTDYIKSLSPSTLD 581
+ +F F +KSL+PS LD
Sbjct: 909 RTGCISGDFEPFFFEMKSLNPSRLD 933
Score = 157 (60.3 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 50/149 (33%), Positives = 79/149 (53%)
Query: 13 DGQP--LLASGA-SSGVISIWNLEKR-RLQSVIREAHD-------NAIISLHFFANEPVL 61
DGQ +A+ +SG I++W+L + R+ V+R AH + I + F +PV+
Sbjct: 296 DGQQSGAMATACLASGDITLWDLNRGGRVVGVLRNAHKVSAGDPGSGINHIEFLDGQPVI 355
Query: 62 MSASADNSIKMWIFDTTDGDP--RLLRFRSGHSAPPLCIRF---YANG-----RHILSAG 111
+S DNS++ WI D + P R L RSGHS + F +++G + +LSA
Sbjct: 356 VSTGKDNSLRTWIVDESPFSPIPRPLHSRSGHSDTITTVSFLPSHSDGSETTAKWLLSAS 415
Query: 112 QDRAFRLFSVIQDQQSRELSQRHVAKRAR 140
+D + FS+ +D QS ELSQ V + A+
Sbjct: 416 KDSSLWGFSLRKDSQSTELSQGSVEQGAK 444
Score = 58 (25.5 bits), Expect = 4.0e-55, Sum P(2) = 4.0e-55
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 4 AVTALAFSSD----GQPLLASGA------SSGVISIWNLEKR-RLQSVIREAH 45
A+T+L F +D G+ SGA +SG I++W+L + R+ V+R AH
Sbjct: 280 AITSLTFRNDDAGAGEDGQQSGAMATACLASGDITLWDLNRGGRVVGVLRNAH 332
Score = 54 (24.1 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 21 GASSGVISIWNLEKRRLQSVIREAHDNA 48
G S G + IWN++ RL I A NA
Sbjct: 206 GKSDGTVDIWNVKTGRLVHSIFAAFPNA 233
>UNIPROTKB|G4N4W8 [details] [associations]
symbol:MGG_16744 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0000935 "barrier septum"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0005816 "spindle pole
body" evidence=ISS] [GO:0005819 "spindle" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005634
GO:GO:0005816 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
EMBL:CM001233 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GO:GO:0000935 GO:GO:0005732 RefSeq:XP_003711887.1
ProteinModelPortal:G4N4W8 EnsemblFungi:MGG_16744T0 GeneID:12984240
KEGG:mgr:MGG_16744 Uniprot:G4N4W8
Length = 1042
Score = 484 (175.4 bits), Expect = 2.3e-64, Sum P(3) = 2.3e-64
Identities = 129/369 (34%), Positives = 190/369 (51%)
Query: 236 SRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR--WEVG 293
S+ ++L S R H V G+ DS +I+ G +K WDF L + W
Sbjct: 613 SKSTFLPGSGR----HKKAVTGIVVDSMLKHVITCSLDGTVKFWDFLTGALLDQIDWAPM 668
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
S++ YH + LLA DD IR+ D+ R +R+F G I DFCFS DG+W++++
Sbjct: 669 TSIIGCRYHSGSNLLAFSCDDNSIRVVDMETKRTIREFWGCQSTINDFCFSPDGRWIVAA 728
Query: 354 GMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGD 413
D +LR+WD+ + IDA+ ++ A+S S + LATA + GV+LW NR +F
Sbjct: 729 SQDSTLRVWDLPTSHLIDAVRLEQPCKAVSFSSTGEFLATATEGELGVHLWTNRTLFKHV 788
Query: 414 SNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDS--FGLPTFKQQIPD 471
+ S KEI + P+ S EG D D P+D+ P+ Q D
Sbjct: 789 AT--KQISEKEIAHISAPTTSG-EG----GFGIVDAAFEDDAPEDNDIITAPSLDQLSAD 841
Query: 472 LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTK 531
L+TLSL+PKS+WQ+L++LD+IK RN APFFLP V + ++ T
Sbjct: 842 LMTLSLVPKSKWQTLLHLDLIKNRNKPKEAPKVPEKAPFFLPPVGEQNSIDAVAKTDKTS 901
Query: 532 EDTESLKVGNKTKPDIPVSQ--FIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQI 589
D++S ++ T D+ SQ F L + A N+ F +++KSLSPST D+ELR L
Sbjct: 902 -DSQS-RI---TALDMSRSQEAFTAKLRAGAASGNYDGFIEHLKSLSPSTADLELRSLSS 956
Query: 590 IDHDDHQEL 598
D D ++ L
Sbjct: 957 SDGDFNELL 965
Score = 245 (91.3 bits), Expect = 2.8e-33, Sum P(3) = 2.8e-33
Identities = 84/264 (31%), Positives = 129/264 (48%)
Query: 421 SGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDS--FGLPTFKQQIPDLVTLSLL 478
S KEI + P+ S EG D D P+D+ P+ Q DL+TLSL+
Sbjct: 794 SEKEIAHISAPTTSG-EG----GFGIVDAAFEDDAPEDNDIITAPSLDQLSADLMTLSLV 848
Query: 479 PKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLK 538
PKS+WQ+L++LD+IK RN APFFLP V + ++ T D++S +
Sbjct: 849 PKSKWQTLLHLDLIKNRNKPKEAPKVPEKAPFFLPPVGEQNSIDAVAKTDKTS-DSQS-R 906
Query: 539 VGNKTKPDIPVSQ--FIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQ 596
+ T D+ SQ F L + A N+ F +++KSLSPST D+ELR L D D ++
Sbjct: 907 I---TALDMSRSQEAFTAKLRAGAASGNYDGFIEHLKSLSPSTADLELRSLSSSDGDFNE 963
Query: 597 ELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLL 656
L I+ L L+ R ++E +QA + +FL++H + V L + R+
Sbjct: 964 LLH------FIKALTARLV----ARRDYELMQAWMTVFLRLHCDQVVLDDVLIEALRQWK 1013
Query: 657 EVQSAVWQKIDKMFQSARCVVSFL 680
+ +++D + VV FL
Sbjct: 1014 VQEEKEKERLDNLVGYCGGVVGFL 1037
Score = 157 (60.3 bits), Expect = 2.3e-64, Sum P(3) = 2.3e-64
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 52 LHFFANEPVLMSASADNSIKMWIFDTT--DGDPRLLRFRSGHSAPPLCIRFY-------- 101
+ F + V++++ DNS+K WIFD PR+L RSGH+AP C++F
Sbjct: 346 VEFLPGQHVILTSGLDNSLKSWIFDEAALSPVPRVLHSRSGHAAPVTCLQFLPSDFDGAE 405
Query: 102 ANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRAR 140
A + +LS G DR+ +S+ +D QS ELSQ + K+A+
Sbjct: 406 AGNKWLLSGGLDRSLWGWSLRRDGQSTELSQGSIRKKAK 444
Score = 143 (55.4 bits), Expect = 6.7e-63, Sum P(3) = 6.7e-63
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 11 SSDGQPLLASGAS-SGVISIWNLEKR-RLQSVIREAHD----------NAIISLHFFANE 58
+ D ++A+ + SG I+ W+L K R+ SV+R AH+ I + F +
Sbjct: 293 AQDKDGVMATATTGSGDITFWDLNKGGRIMSVLRGAHNPPLNDGRTVRGGIGKVEFLPGQ 352
Query: 59 PVLMSASADNSIKMWIFDTT--DGDPRLLRFRSGHSAPPLCIRF 100
V++++ DNS+K WIFD PR+L RSGH+AP C++F
Sbjct: 353 HVILTSGLDNSLKSWIFDEAALSPVPRVLHSRSGHAAPVTCLQF 396
Score = 95 (38.5 bits), Expect = 2.3e-64, Sum P(3) = 2.3e-64
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 167 WCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWI 226
W +V+T H + +A W G P + + V IS CG FA++G+ G +
Sbjct: 511 WESVITAHRNDPKARTWFWGRKKAGRWAF-PTGDG-SYVSTVAISPCGTFALVGSMEGGV 568
Query: 227 ERFNLQSGISR 237
+ +NLQSG R
Sbjct: 569 DMYNLQSGQHR 579
Score = 66 (28.3 bits), Expect = 5.9e-19, Sum P(4) = 5.9e-19
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 319 LFDVVAL----RMVRKFEGHTDRIT-------DFCFSEDG-KWLLSSGMDGSLRIWDV 364
+FD AL R++ GH +T DF +E G KWLLS G+D SL W +
Sbjct: 368 IFDEAALSPVPRVLHSRSGHAAPVTCLQFLPSDFDGAEAGNKWLLSGGLDRSLWGWSL 425
Score = 65 (27.9 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 28/118 (23%), Positives = 50/118 (42%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AVT + S + ++ G + W+ L I A +II + + +L
Sbjct: 627 AVTGIVVDSMLKHVITCSLD-GTVKFWDFLTGALLDQIDWAPMTSIIGCRYHSGSNLLAF 685
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ DNSI++ +T R +R G + F +GR I++A QD R++ +
Sbjct: 686 SCDDNSIRVVDMETK----RTIREFWGCQSTINDFCFSPDGRWIVAASQDSTLRVWDL 739
Score = 49 (22.3 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIRE--AHDNAIISLHFFANEPVLMSASADNSIK 71
G LLA I + ++E +R IRE + I F + +++AS D++++
Sbjct: 679 GSNLLAFSCDDNSIRVVDMETKR---TIREFWGCQSTINDFCFSPDGRWIVAASQDSTLR 735
Query: 72 MWIFDTT 78
+W T+
Sbjct: 736 VWDLPTS 742
Score = 44 (20.5 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 22/93 (23%), Positives = 36/93 (38%)
Query: 21 GASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDG 80
G G + IWN+ +L I A ++ P L + + S + +
Sbjct: 204 GRKDGWVEIWNVSTGKLIYTILPPSPKAG-AVTCMEPTPALSTMAIAYSSGLLMIQNILT 262
Query: 81 DPRLLRFRSG-HSAPPLCIRFYANGRHILSAGQ 112
D +L ++G AP I F +G+ AGQ
Sbjct: 263 DKPVLAVKAGTEDAPVSTITFRTDGK---GAGQ 292
Score = 44 (20.5 bits), Expect = 5.9e-19, Sum P(4) = 5.9e-19
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 252 NGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKS 288
+G+ G A D + + GDI WD KG + S
Sbjct: 286 DGKGAGQAQDKDGVMATATTGSGDITFWDLNKGGRIMS 323
Score = 44 (20.5 bits), Expect = 9.8e-17, Sum P(4) = 9.8e-17
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 350 LLSSGMDGSLRIW 362
+L+SG+D SL+ W
Sbjct: 355 ILTSGLDNSLKSW 367
Score = 42 (19.8 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 215 NFAVLGTAGGWIERFNLQSG 234
N +G GW+E +N+ +G
Sbjct: 199 NKIFVGRKDGWVEIWNVSTG 218
Score = 40 (19.1 bits), Expect = 4.0e-52, Sum P(3) = 4.0e-52
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
GAVT + + +A SSG++ I N+ + ++ ++A +S F +
Sbjct: 232 GAVTCME-PTPALSTMAIAYSSGLLMIQNILTDKPVLAVKAGTEDAPVSTITFRTDGKGA 290
Query: 63 SASADNSIKMWIFDTTDGD 81
+ D M T GD
Sbjct: 291 GQAQDKDGVMATATTGSGD 309
>DICTYBASE|DDB_G0277019 [details] [associations]
symbol:wdr36 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0277019
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974 GO:GO:0030515
eggNOG:COG2319 GenomeReviews:CM000151_GR EMBL:AAFI02000019
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14554
RefSeq:XP_642832.1 ProteinModelPortal:Q550V0 STRING:Q550V0
EnsemblProtists:DDB0237567 GeneID:8620696 KEGG:ddi:DDB_G0277019
InParanoid:Q550V0 OMA:VSANMEN Uniprot:Q550V0
Length = 1026
Score = 456 (165.6 bits), Expect = 2.0e-52, Sum P(2) = 2.0e-52
Identities = 123/428 (28%), Positives = 209/428 (48%)
Query: 2 RGAVTALAFSSDGQPL-LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
RG+V++++F SDGQ +A+ + SG I IW+LEK + ++ AHD+ + F EP+
Sbjct: 232 RGSVSSISFRSDGQKQHVATSSHSGDILIWDLEKNKPFHTLK-AHDSECTKVEFLREEPI 290
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH--ILSAGQDRAFRL 118
+ + DNSIKMW F+ DG P LLR R+GH PP F+ + + ++S D++ R
Sbjct: 291 ICTTGNDNSIKMWQFNGVDGVPILLRERTGHLDPPKSSEFFGDEQENSVISIS-DQSIRY 349
Query: 119 FSVIQDQQSRELSQRHVAKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTA 178
S++ ++ELS+++ K P F R R W V+ H D+
Sbjct: 350 VSIVASTFNKELSKKNFKKEM------------TPFSGFSTNFRRNRSWETAVSIHEDSK 397
Query: 179 QAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRG 238
A+ W ++ + + + P + + IS CGNF GT G + +FN+QSGI R
Sbjct: 398 HAFTWDCSSYSINKKLNIQEP-----ISSTKISTCGNFVFFGTVYGNLLKFNIQSGIKRA 452
Query: 239 SYLDMSERSNYAH------NGEVVGVACDSTNTLM----ISAGYHGDIKVWDFKGRDLKS 288
L ++++ N ++ DS + Y DI + ++ +
Sbjct: 453 KILPNIQKTSITSIIVEPTNQFIITSGLDSIINYWDFNDLKYLYSIDINNTNTNNKENQD 512
Query: 289 R-----WEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF 343
+ + K++ H +G+ A V++D IRL+D+ ++VR F + + F
Sbjct: 513 NNNNDNKKSKIRISKMLLHSESGIFAVVSNDDKIRLYDIDTRKLVRYFNVKGN-VNSIVF 571
Query: 344 SEDGKWLLSSG-MDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 402
S DG+W+++S +D +R+ D+ + ID + +T+LS SP + L T H Q +Y
Sbjct: 572 SHDGRWIIASTQVDSVVRVLDIPSGKMIDWFKMPKPVTSLSFSPKGEYLVTTHSGQLPIY 631
Query: 403 LWVNRCMF 410
LW N+ F
Sbjct: 632 LWSNQSHF 639
Score = 156 (60.0 bits), Expect = 2.0e-52, Sum P(2) = 2.0e-52
Identities = 45/166 (27%), Positives = 84/166 (50%)
Query: 521 EILFKPSESTKEDTESLKVGNKTKPDI---PVSQFIQLLHSCAEMKNFSAFTDYIKSLSP 577
E L K +E+ K + E + K D + F L + +N+S +KSL+P
Sbjct: 870 EDLEKTTETFKNEKEIYRSDKVIKTDSLQGTRTNFNLSLENGYITQNYSESLRILKSLTP 929
Query: 578 STLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKI 637
S +D E+R L D +Y I + D++++++ +++FIQ+++ + LK+
Sbjct: 930 SGIDFEIRTLTTAD-----------DYADIHYMFDFIVYQLLKNGDYDFIQSILSVTLKV 978
Query: 638 HGETVRCHTKLQDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNS 683
HG + T +D R+LL V + W K+ K+F S C++ + +N+
Sbjct: 979 HGYLLYDTTFKRD-LRQLLLVFNEPWFKMQKLFHSNICMLRYFTNT 1023
Score = 156 (60.0 bits), Expect = 9.2e-19, Sum P(3) = 9.2e-19
Identities = 64/246 (26%), Positives = 110/246 (44%)
Query: 276 IKVWDFKGRDLKSRWEVGCSLVKIVY-HRVNGLLATVADDLVIRLFDVVALRMVRKFEGH 334
I+++D R L + V ++ IV+ H ++A+ D V+R+ D+ + +M+ F+
Sbjct: 546 IRLYDIDTRKLVRYFNVKGNVNSIVFSHDGRWIIASTQVDSVVRVLDIPSGKMIDWFK-M 604
Query: 335 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLAT 393
+T FS G++L+++ G L I+ + + Q H V + PN +L +
Sbjct: 605 PKPVTSLSFSPKGEYLVTTH-SGQLPIY--LWSNQS---HFGSVFLKTPPQIPNTIILPS 658
Query: 394 AHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTD 453
++ + + N S + ++ ++ + DE V D
Sbjct: 659 QVIEISPIQESSNNKQKSSTKKLKEKEQHEQDEEFEIQQDLGLPEEFDEEMEDNQVDNND 718
Query: 454 RVPKDSFGLPTFKQQIPDLVTLSL-LPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFL 512
D+ T KQ I L+TLS + KS+WQSL+NLDIIK RN APFFL
Sbjct: 719 NDADDN-KKSTIKQ-IDQLITLSSDVAKSKWQSLLNLDIIKERNRPIQQNEKPALAPFFL 776
Query: 513 PSVPSL 518
++ L
Sbjct: 777 STIQGL 782
Score = 55 (24.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 33/152 (21%), Positives = 68/152 (44%)
Query: 275 DIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRK---- 330
DI +W + + + R ++K++ + +L ++A + + ++DV + R++ K
Sbjct: 81 DIILWKGQYEEFRFRGH-SSKVIKLMVF--DNILFSLAKNNELIMWDVDS-RLIFKEQLP 136
Query: 331 -FEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVILARQI-------DAIHVDVSITA 381
F T RIT+ + G + G +IW++ + I D ++ IT+
Sbjct: 137 EFNAKTHRITEIVHPLGYYNKILIGFESGEAQIWNIKTKKLIFTFNLVKDNKNIKDKITS 196
Query: 382 LSLSPNMDVLATAHVDQNGVY--LWVNRCMFS 411
SP D++A D N + L +N+ + S
Sbjct: 197 FQQSPVSDIIAIGFSDGNVIIHNLKLNKTVLS 228
Score = 51 (23.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
++G V ++ FS DG+ ++AS V+ + ++ ++ + + SL F
Sbjct: 562 VKGNVNSIVFSHDGRWIIASTQVDSVVRVLDIPSGKMIDWFKMP--KPVTSLSFSPKGEY 619
Query: 61 LMSA-SADNSIKMW 73
L++ S I +W
Sbjct: 620 LVTTHSGQLPIYLW 633
Score = 50 (22.7 bits), Expect = 9.2e-19, Sum P(3) = 9.2e-19
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
H + +I L F N +L S + +N + MW D+
Sbjct: 97 HSSKVIKLMVFDN--ILFSLAKNNELIMWDVDS 127
Score = 48 (22.0 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 21 GASSGVISIWNLEKRRLQSVIREAHDNAIIS--LHFFANEPV 60
G SG IWN++ ++L DN I + F PV
Sbjct: 161 GFESGEAQIWNIKTKKLIFTFNLVKDNKNIKDKITSFQQSPV 202
Score = 48 (22.0 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 20/103 (19%), Positives = 44/103 (42%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
++A G S G + I NL+ + +V+ ++ S+ F ++ A++ +S + I+D
Sbjct: 205 IIAIGFSDGNVIIHNLKLNK--TVLSFQQRGSVSSISFRSDGQKQHVATSSHSGDILIWD 262
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
P H + + F I + G D + +++
Sbjct: 263 LEKNKP--FHTLKAHDSECTKVEFLREEPIICTTGNDNSIKMW 303
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 15/84 (17%), Positives = 36/84 (42%)
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITA 381
+ +V+ + D+IT F S + DG++ I ++ L + + + S+++
Sbjct: 178 IFTFNLVKDNKNIKDKITSFQQSPVSDIIAIGFSDGNVIIHNLKLNKTVLSFQQRGSVSS 237
Query: 382 LSLSPNMDVLATAHVDQNG-VYLW 404
+S + A +G + +W
Sbjct: 238 ISFRSDGQKQHVATSSHSGDILIW 261
>WB|WBGene00012887 [details] [associations]
symbol:Y45F10D.7 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR018391 SMART:SM00564 GO:GO:0006364 GO:GO:0032040
EMBL:AL021492 GeneTree:ENSGT00390000004976 OMA:DGIIACH
RefSeq:NP_502661.3 ProteinModelPortal:O62477 SMR:O62477
STRING:O62477 PaxDb:O62477 EnsemblMetazoa:Y45F10D.7 GeneID:178346
KEGG:cel:CELE_Y45F10D.7 UCSC:Y45F10D.7 CTD:178346
WormBase:Y45F10D.7 HOGENOM:HOG000175599 InParanoid:O62477
NextBio:900754 Uniprot:O62477
Length = 924
Score = 295 (108.9 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 75/236 (31%), Positives = 116/236 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+T +AF DG+ + + +G +++W+LEK+ L I H + I L+F EP+++SA
Sbjct: 233 ITNVAFRDDGESTMVTADKNGTMAVWDLEKQELIGKITGIHSDEINCLYFVPGEPIMLSA 292
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S DNS+++WIFD+ DG PR L GHS P I+F H+LSAG+D + R + V
Sbjct: 293 SLDNSLRLWIFDSADGMPRELVRLEGHSKPCASIKFVGKD-HVLSAGKDGSIRKYDVSSL 351
Query: 125 QQSRELSQRHVAKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWR 184
++L V + + +AF RE W NV ++ + W+
Sbjct: 352 TMRQKLGT--VGQGVKLNKEVQNVAE----MAFGWQ--REAAWNNVFCRQVNDTKITTWQ 403
Query: 185 LQNFVLG----EH--ILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSG 234
+N G EH + A +S CGNF +G + G I++FN QSG
Sbjct: 404 TRNNTSGAFTLEHDRFKKKVDFIDANATALCVSPCGNFVFIGYSTGHIDQFNAQSG 459
Score = 272 (100.8 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 112/449 (24%), Positives = 195/449 (43%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR-WEVGCSLVKIVYHRVNGLL 308
A + + ++ D ++S G I W + + ++ ++ L N L+
Sbjct: 497 AADSPITSLSVDQRGKELMSTDAQGHILFWSLSTKAINAKMFKKDVRLGICAPCPSNSLV 556
Query: 309 ATVA-----DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
A VA + VI L D V R+ R FE +++ FS DGKWLL + D +R++D
Sbjct: 557 ALVAIAENGKESVI-LVDTVCHRVARAFETVGNKVNAMTFSSDGKWLLVADNDSYIRVFD 615
Query: 364 VILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGK 423
V ++ ID + ++S + LAT H + VY W N+ +F NI ++ +
Sbjct: 616 VATSQLIDVLLFSKPCISMSYNETGQYLATVHEGERAVYTWANKVLFVAHINIRAHPADY 675
Query: 424 EIVSVKMPSVSSVEG--CQDENSSQPDVHRTDRVPKDSFGLPTFKQ-QIPD-LVTLSLLP 479
+ S M +S+ EG C D + + D+ T + +D + K+ QI + LVT S LP
Sbjct: 676 -LPSWSM--ISTEEGGTC-DIDDDEDDL--TTLMDQD---IKAMKELQIDENLVTFSGLP 726
Query: 480 KSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKV 539
S+W +L +L +IK RN APFFL + +L G + + D +S +
Sbjct: 727 SSRWANLPDLALIKERNKPTDAVKKIKQAPFFLSASATLDGFEFETENIGDEMDGDSRYI 786
Query: 540 GNKTKPDIPVSQFIQLLHSCAEMKNF-SAFTDYIKSLSPSTLDMELRML--QIIDHDDHQ 596
+K S F LL + + AF ++++S S +D ++R L + I
Sbjct: 787 TSKRNLLELESSFTTLLRNAKTRDHLLDAFKT-LQNMSLSAIDFQIRTLNPKTIPIFFRM 845
Query: 597 ELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLL 656
L+ + EL+ Y + R + E H +L + ++
Sbjct: 846 LLEVLKTKTNFELVQAYAATATK----------IHRTIMWNASEGASEHEELTEVLEEMA 895
Query: 657 EVQSAVWQKIDKMFQSARCVVSFLSNSQL 685
+VQ W +++ +F VV ++ N+ L
Sbjct: 896 QVQMESWNEMENLFVENMAVVQWIKNALL 924
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 152 (58.6 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 36/120 (30%), Positives = 70/120 (58%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R A+T+L FS G+ + ASG+ + +WN+ K + ++ H +A+ + F + +L
Sbjct: 18 RDAITSLDFSPSGKQI-ASGSVDASVMVWNM-KPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S+S D ++++W+ + G+ L R +G S +C F A+G+ +L+A D++ +L+SV
Sbjct: 76 ASSSRDKTVRLWV-PSVKGESVLFRAHTG-SVRSVC--FSADGQSLLTASDDQSIKLWSV 131
Score = 143 (55.4 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 40/156 (25%), Positives = 73/156 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW-EVGCSLVKIVYHRVNGLLA 309
HN V LM+S +K+WD R L + E G + +H + +A
Sbjct: 143 HNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIA 202
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
T + D +R++D+ +++ ++ H+ + F G LL++ D +L+I D++ R
Sbjct: 203 TASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRL 262
Query: 370 IDAIHVDV-SITALSLSPNMDVLATAHVDQNGVYLW 404
+ +H S + +S S + D A+A DQ V +W
Sbjct: 263 LYTLHGHQGSASCVSFSRSGDQFASAGSDQQ-VMVW 297
Score = 126 (49.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS LLAS + + +W + + +SV+ AH ++ S+ F A+ L
Sbjct: 60 KDAVTCVQFSPSAH-LLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSL 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D SIK+W + + R H+ C RF +G+ ++S DR +L+
Sbjct: 118 LTASDDQSIKLW---SVHRQKIICTLRE-HNNWVRCARFSPDGQLMVSVSDDRTVKLW-- 171
Query: 122 IQDQQSREL 130
D SR+L
Sbjct: 172 --DASSRQL 178
Score = 118 (46.6 bits), Expect = 0.00089, P = 0.00089
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V FS DGQ L+ S + + +W+ R+L E + + F + + +A
Sbjct: 147 VRCARFSPDGQ-LMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSY-VDFHPSSTCIATA 204
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
S+DN++++W T LL+ HSA + F+ +G H+L+A D ++ +++
Sbjct: 205 SSDNTVRVWDIRTHT----LLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLE 259
Score = 86 (35.3 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +AI SL F + + S S D S+ +W R RF +GH C++F
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVW---NMKPQSRAYRF-TGHKDAVTCVQFSP 70
Query: 103 NGRHILSAGQDRAFRLF 119
+ + S+ +D+ RL+
Sbjct: 71 SAHLLASSSRDKTVRLW 87
Score = 44 (20.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 554 QLLHSCAEMKNFSAFTDYIKS---LSPSTLDMELRMLQIIDH 592
QL+H+ E +S++ D+ S ++ ++ D +R+ I H
Sbjct: 177 QLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTH 218
Score = 43 (20.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 128
DP L R GH + F +G+ I S D + ++++ QSR
Sbjct: 7 DPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNM--KPQSR 52
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 159 (61.0 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 44/158 (27%), Positives = 79/158 (50%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G V V ++S Y +K+WD +L + V+ + +G LLA
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLA 808
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---L 366
+ + D I L+D +++ FEGH I F+ DGK L S+ D +++IWD+ L
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGEL 868
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ +D+ H S+ +++ SP+ +LA++ +D + +W
Sbjct: 869 QQTLDS-HSQ-SVRSVAFSPDGKLLASSSLDST-IKVW 903
Score = 155 (59.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V ++AFS DG+ L ASG+ + +WN L + E H ++ S+ F + L
Sbjct: 919 GWVKSVAFSPDGKKL-ASGSEKNTVKLWNPATGELLQTL-EGHSQSVRSVAFSPDGKQLA 976
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S+S+D +IK+W ++T G+ L + GH + F +G+H++S D +L+ +
Sbjct: 977 SSSSDTTIKLW--NSTTGE--LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLA 1032
Query: 123 QD--QQSRELSQRHV 135
QQS E R V
Sbjct: 1033 TSELQQSLEDHSRSV 1047
Score = 152 (58.6 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 39/156 (25%), Positives = 74/156 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LA 309
H+G V +A L+ S Y I +WD +L +E + V +G LA
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELA 850
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ +DD I+++D+ + + + H+ + FS DGK L SS +D ++++W+
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 370 IDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
++ + +++ SP+ LA+ ++N V LW
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGS-EKNTVKLW 945
Score = 151 (58.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 56/223 (25%), Positives = 102/223 (45%)
Query: 184 RLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDM 243
+L + GE + R + V++ T S G + G I+ +N +G + + +
Sbjct: 1069 KLWDSATGE-LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQT---L 1124
Query: 244 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHR 303
+ RS++ V VA + S Y IK+WD +L E ++ V
Sbjct: 1125 TGRSDW-----VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFS 1179
Query: 304 VNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+G LLA+ + D +L+D +++ FEGH+ + FS DGK L SS ++++W
Sbjct: 1180 PDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Query: 363 DVILARQIDAIH-VDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D + + ++ D S +++ SP+ + LA+ VD +W
Sbjct: 1240 DPVTGELLQTLNDPDESAGSVAFSPDGNRLAS--VDIFDTKIW 1280
Score = 149 (57.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+AFS DG+ L+ SG+ I +W+L LQ + E H ++ ++ F ++ L S+
Sbjct: 1005 IRAVAFSPDGKHLV-SGSDDNTIKLWDLATSELQQSL-EDHSRSVHAVAFSPDDKQLASS 1062
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D++IK+W D+ G+ L R GHS + F +G+ + S D +L++ +
Sbjct: 1063 SLDSTIKLW--DSATGE--LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG 1118
Query: 125 QQSRELSQR 133
+ + L+ R
Sbjct: 1119 ELQQTLTGR 1127
Score = 147 (56.8 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-L 308
+H+ V VA L+ S+ IKVW+ +L+ E VK V +G L
Sbjct: 874 SHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKL 933
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA- 367
A+ ++ ++L++ +++ EGH+ + FS DGK L SS D ++++W+
Sbjct: 934 ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE 993
Query: 368 -RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+Q H D+ I A++ SP+ L + D N + LW
Sbjct: 994 LQQTFKGH-DLWIRAVAFSPDGKHLVSGS-DDNTIKLW 1029
Score = 138 (53.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +LAFS DG+ LLASG+ I +W+ L E H ++I S+ F + L
Sbjct: 793 GTVESLAFSPDGK-LLASGSYDNTIDLWDSATGELLQTF-EGHPHSIWSVAFAPDGKELA 850
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
SAS D++IK+W D G+ L + HS + F +G+ + S+ D ++++
Sbjct: 851 SASDDSTIKIW--DLATGE--LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 123 QDQQSRELSQR 133
+ + L R
Sbjct: 907 TGELQQSLEGR 917
Score = 137 (53.3 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 309
H+ + VA ++S IK+WD +L+ E S+ + + + LA
Sbjct: 1001 HDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLA 1060
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D + R EGH+ + FS DGK L S+ DG++++W+ L +
Sbjct: 1061 SSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNP-LTGE 1119
Query: 370 IDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLW 404
+ S + +++ SP+ LA+ + D + LW
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDST-IKLW 1155
Score = 135 (52.6 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 36/137 (26%), Positives = 65/137 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V ++ FS DG+ L+ SG+ + IW+ L + + H + SL F + +L
Sbjct: 751 GPVESVVFSPDGKQLV-SGSYDDTVKIWDPATGELLQTL-DGHSGTVESLAFSPDGKLLA 808
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S S DN+I +W D+ G+ LL+ GH + F +G+ + SA D +++ +
Sbjct: 809 SGSYDNTIDLW--DSATGE--LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
Query: 123 QDQQSRELSQRHVAKRA 139
+ + L + R+
Sbjct: 865 TGELQQTLDSHSQSVRS 881
Score = 133 (51.9 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 41/162 (25%), Positives = 76/162 (46%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
++S +G V VA + S +K+W+ +L E V+ V
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP 970
Query: 305 NGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+G LA+ + D I+L++ + + F+GH I FS DGK L+S D ++++WD
Sbjct: 971 DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Query: 364 VILARQIDAIHVDV-SITALSLSPNMDVLATAHVDQNGVYLW 404
+ + ++ S+ A++ SP+ LA++ +D + LW
Sbjct: 1031 LATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDST-IKLW 1071
Score = 130 (50.8 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++AFS DG+ LLAS + I +WN LQ + E + S+ F + L S
Sbjct: 878 SVRSVAFSPDGK-LLASSSLDSTIKVWNPATGELQQSL-EGRSGWVKSVAFSPDGKKLAS 935
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
S N++K+W + G+ LL+ GHS + F +G+ + S+ D +L++
Sbjct: 936 GSEKNTVKLW--NPATGE--LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN 988
Score = 117 (46.2 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H + VA + SA IK+WD +L+ + V+ V +G LLA
Sbjct: 833 HPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLA 892
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I++++ + + EG + + FS DGK L S ++++W+
Sbjct: 893 SSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGEL 952
Query: 370 IDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + S+ +++ SP+ LA++ D + LW
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTT-IKLW 987
Score = 80 (33.2 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 30 WNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 89
W+ E++ L++ H + S+ F + L+S S D+++K+W D G+ LL+
Sbjct: 739 WSAEQQTLEN-----HLGPVESVVFSPDGKQLVSGSYDDTVKIW--DPATGE--LLQTLD 789
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQ 132
GHS + F +G+ + S D L+ D + EL Q
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLW----DSATGELLQ 828
Score = 43 (20.2 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 392 ATAHVDQN--GVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQD-ENSSQ 446
AT + Q+ G WV FS D ASG E +VK+ + ++ E Q E SQ
Sbjct: 906 ATGELQQSLEGRSGWVKSVAFSPDGK--KLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Score = 41 (19.5 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 546 DIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRM 586
D+ S+ Q L + + AF+ K L+ S+LD +++
Sbjct: 1030 DLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKL 1070
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 146 (56.5 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 43/128 (33%), Positives = 67/128 (52%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++ L
Sbjct: 61 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSL 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W +T L S H C RF +GR I+SA D+ +L+
Sbjct: 119 VTASDDKTVKVW---STHRQKFLFSL-SQHINWVRCARFSPDGRLIVSASDDKTVKLW-- 172
Query: 122 IQDQQSRE 129
D+ SRE
Sbjct: 173 --DKTSRE 178
Score = 140 (54.3 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 32/129 (24%), Positives = 59/129 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 309
H G V V + T + +A +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW----DVI 365
T + D +++ D++ R++ GH T FS G++ S G D + +W DV+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVV 305
Query: 366 LARQIDAIH 374
R++ +H
Sbjct: 306 DYREVIKVH 314
Score = 129 (50.5 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 33/134 (24%), Positives = 73/134 (54%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R A+T++ FS + + L ASG+ + +W++ K + ++ H +A+ ++F + +L
Sbjct: 19 RDAITSVDFSLNTKQL-ASGSMDSCLMVWHM-KPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D ++++WI G+ + R H+A + F ++G+ +++A D+ +++S
Sbjct: 77 ASGSRDKTVRIWI-PNVKGESTVFR---AHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 122 IQDQQSRELSQRHV 135
+ + LSQ H+
Sbjct: 133 HRQKFLFSLSQ-HI 145
Score = 128 (50.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
L++SA +K+WD R+ + S E G + + +H +A + D ++++DV
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRT 218
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
R+++ ++ H+ + F G +LL++ D +L+I D++ R + +H T ++
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 384 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 431
S + A+ D+ V +W SN D +E++ V P
Sbjct: 279 FSRTGEYFASGGSDEQ-VMVW--------KSNFD-VVDYREVIKVHRP 316
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G VT + F G +A+ + + +W++ RL + H A+ +L F + L+
Sbjct: 188 GFVTYVDFHPSGT-CIAAASMDNTVKVWDVRTHRLLQHY-QLHSAAVNALSFHPSGNYLL 245
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS+D+++K I D +G RLL GH P + F G + S G D
Sbjct: 246 TASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 90 (36.7 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +AI S+ F N L S S D+ + +W R RF +GH C+ F
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQS---RAYRF-AGHKDAVTCVNFSP 71
Query: 103 NGRHILSAG-QDRAFRLF 119
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 53 (23.7 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 33/141 (23%), Positives = 51/141 (36%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
+ MD VW ++ L +H + AV A + GN+ + ++ ++
Sbjct: 202 IAAASMDNT-VKVWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLLTASSDSTLKIL 256
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
+L G R Y + + H G VA T S G + VW KS
Sbjct: 257 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW-------KSN 301
Query: 290 WEVGCSLVKIVYHRVNGLLAT 310
++V I HR LAT
Sbjct: 302 FDVVDYREVIKVHRPPAPLAT 322
Score = 41 (19.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 128
DP L R GH + F N + + S D ++ + QSR
Sbjct: 8 DPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHM--KPQSR 53
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 145 (56.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 42/128 (32%), Positives = 69/128 (53%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++ +L
Sbjct: 61 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLL 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W +T R L + H C +F +GR I+SA D+ +L+
Sbjct: 119 VTASDDKTVKVW---STHRQ-RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 172
Query: 122 IQDQQSRE 129
D+ SRE
Sbjct: 173 --DKTSRE 178
Score = 136 (52.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 309
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 129 (50.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 39/151 (25%), Positives = 70/151 (46%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH V V S L+++A +KVW + R L S + + V+ +G L
Sbjct: 101 AHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQ-HINWVRCAKFSPDGRL 159
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+ + +DD ++L+D + V + H +T F G + ++GMD ++++WD
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTH 219
Query: 368 RQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
R + + ++ ALS P+ + L TA D
Sbjct: 220 RLVQHYQLHSAAVNALSFHPSGNYLITASSD 250
Score = 124 (48.7 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 33/134 (24%), Positives = 72/134 (53%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R AVT + FS + + L ASG+ + IW++ K + ++ H +A+ ++F + +L
Sbjct: 19 RDAVTCVDFSLNTKHL-ASGSMDSTLMIWHM-KPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D ++++W+ G+ + R H+A + F ++G+ +++A D+ +++S
Sbjct: 77 ASGSRDKTVRIWV-PNVKGESTVFR---AHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 122 IQDQQSRELSQRHV 135
+ + L+Q H+
Sbjct: 133 HRQRFLFSLTQ-HI 145
Score = 123 (48.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 32/141 (22%), Positives = 68/141 (48%)
Query: 266 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
L++SA +K+WD R+ + S E G + + +H +A D ++++D
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT 218
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
R+V+ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 219 HRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 384 LSPNMDVLATAHVDQNGVYLW 404
S + A+ D+ V +W
Sbjct: 279 FSRTGEYFASGGSDEQ-VMVW 298
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G VT + F G + A+G + + +W+ RL + H A+ +L F + L+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDTRTHRLVQHY-QLHSAAVNALSFHPSGNYLI 245
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS+D+++K I D +G RLL GH P + F G + S G D
Sbjct: 246 TASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 104 (41.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 37/162 (22%), Positives = 73/162 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRVNG-L 307
H V V + L+ S +++W + KG R + V+ V+ +G L
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT--ATVRSVHFCSDGQL 117
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L T +DD ++++ R + H + + FS DG+ ++S+ D ++++WD +
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT-S 176
Query: 368 RQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLWVNR 407
R+ + + +T + P+ +A A +D N V +W R
Sbjct: 177 RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD-NTVKVWDTR 217
Score = 85 (35.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ + F N L S S D+++ +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS---RAYRF-TGHKDAVTCVNFSP 71
Query: 103 NGRHILSAG-QDRAFRLF 119
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 61 (26.5 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 128
DP L R GH C+ F N +H+ S D ++ + QSR
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM--KPQSR 53
Score = 52 (23.4 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 24/110 (21%), Positives = 39/110 (35%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
+ MD VW + L +H + AV A + GN+ + ++ ++
Sbjct: 202 IAAAGMDNT-VKVWDTRTHRLVQHYQL----HSAAVNALSFHPSGNYLITASSDSTLKIL 256
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+L G R Y + + H G VA T S G + VW
Sbjct: 257 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 151 (58.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 265 TLMISAGYHGDIKVWDFKGRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVV 323
T + SAG +K+WD + L ++V C + + +H + L T + D +++ D++
Sbjct: 199 TCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLI 258
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
R++ +GHT + FS+DG+ L S G D + IW
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 135 (52.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ VT+L FS G LLAS + + +W L+++ S + AH + S+ F A+ +L
Sbjct: 60 KDVVTSLQFSPQGN-LLASASRDRTVRLWVLDRKGKSSEFK-AHTAPVRSVDFSADGQLL 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 118 VTASEDKSIKVWSMFRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 122 IQDQ 125
Q
Sbjct: 174 TNKQ 177
Score = 125 (49.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 29/124 (23%), Positives = 69/124 (55%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ A+T+ FS + + + A+ + + +W+L K ++ H + + SL F +L
Sbjct: 18 KAAITSADFSPNCKQI-ATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++W+ D + F++ H+AP + F A+G+ +++A +D++ +++S+
Sbjct: 76 ASASRDRTVRLWVLDRKG---KSSEFKA-HTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131
Query: 122 IQDQ 125
+ +
Sbjct: 132 FRQR 135
Score = 121 (47.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 41/162 (25%), Positives = 72/162 (44%)
Query: 241 LDMSERSNY--AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLV 297
LD +S+ AH V V + L+++A IKVW F+ R L S + V
Sbjct: 89 LDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYR-HTHWV 147
Query: 298 KIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ +G L+ + ++D I+++D + V F F+ +G + S+G D
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSD 207
Query: 357 GSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+++IWD+ + + + V + LS P + L TA D
Sbjct: 208 HAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSD 249
Score = 120 (47.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRVNG-L 307
H V + L+ SA +++W D KG+ S ++ + V+ V +G L
Sbjct: 59 HKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKS--SEFKAHTAPVRSVDFSADGQL 116
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L T ++D I+++ + R + HT + FS DG+ ++S D +++IWD
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 368 RQIDAIHVDVSITA-LSLSPNMDVLATAHVDQNGVYLW 404
+ ++ V + +PN +A+A D + V +W
Sbjct: 177 QCVNNFSDSVGFANFVDFNPNGTCIASAGSD-HAVKIW 213
Score = 75 (31.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 26/94 (27%), Positives = 42/94 (44%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H AI S F N + +AS D + +W + R R+ GH ++F
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLW---SLKPHARAYRY-VGHKDVVTSLQFSP 70
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
G + SA +DR RL+ + + +S E + H A
Sbjct: 71 QGNLLASASRDRTVRLWVLDRKGKSSEF-KAHTA 103
Score = 47 (21.6 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 21/99 (21%), Positives = 38/99 (38%)
Query: 182 VWRLQ-NFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSY 240
+W ++ N +L + + C V + GN V ++ G ++ +L G R Y
Sbjct: 212 IWDIRMNKLLQHYQVHSC-----GVNCLSFHPLGNSLVTASSDGTVKMLDLIEG--RLIY 264
Query: 241 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+ H G V V+ L+ S G + +W
Sbjct: 265 ------TLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 46 (21.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
DP L R GH A F N + I +A D L+S+
Sbjct: 7 DPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSL 47
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 170 (64.9 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 47/160 (29%), Positives = 78/160 (48%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H+ V V+ + L+ SA G +K+WD L++ E VK +V+ + LLA
Sbjct: 262 HDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLA 321
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI--LA 367
+ +DD ++++D + R +GH D + FS D + + S D ++RIW+ L
Sbjct: 322 SASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLL 381
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNR 407
R H D S+ A+S + + LA+A D V +W R
Sbjct: 382 RHTFEDHED-SVMAVSFAHDSRRLASAS-DGGNVKIWDTR 419
Score = 164 (62.8 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 43/162 (26%), Positives = 78/162 (48%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHR 303
+R+ HN V V + L+ SA +K+WD L++ E + V+ +V+
Sbjct: 466 QRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH 525
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ LLA+ +DD+ ++++D + EGH DR+ FS D + L S+ DG+++IW
Sbjct: 526 DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWY 585
Query: 364 VILARQIDAIHVDVSIT-ALSLSPNMDVLATAHVDQNGVYLW 404
+ +L+ S ++LA+A +D V +W
Sbjct: 586 AATGTVQHTFDGSGRVAISLAFSHTSNLLASA-MDDGTVKIW 626
Score = 144 (55.7 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV +++FS D + LLAS + G + IW+ LQ+ + E H+ + S+ F + +L S
Sbjct: 265 AVGSVSFSHDSR-LLASASGDGTVKIWDTATSFLQNTL-EGHNEWVKSVVFSHDSRLLAS 322
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
AS D ++K+W DT G L R GH+ + F + R I S DR R++
Sbjct: 323 ASDDGTVKIW--DTATGT--LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIW 374
Score = 143 (55.4 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 42/158 (26%), Positives = 78/158 (49%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 309
H V+ V+ + + SA G++K+WD + L++ E V V + + LLA
Sbjct: 388 HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLA 447
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD---VIL 366
+ +DD ++++ + R EGH D + FS D + + S+ D +++IWD V L
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPL 507
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+++ H D + ++ S + +LA+A D V +W
Sbjct: 508 QNNLES-H-DNWVRSVVFSHDSRLLASASDDMT-VKIW 542
Score = 130 (50.8 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V A++F+ D + L AS + G + IW+ LQ+V+ E HD+ + S+ F + +L S
Sbjct: 391 SVMAVSFAHDSRRL-ASASDGGNVKIWDTRTGSLQNVL-EGHDDCVNSVSFSPDSRLLAS 448
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
AS D ++K+W T G L R GH+ + F + R I SA D +++
Sbjct: 449 ASDDRTVKIWHAAT--GS--LQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIW 500
Score = 120 (47.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++ FS D + L+AS + + IW+ LQ+ + E+HDN + S+ F + +L SA
Sbjct: 476 VRSVVFSHDSR-LIASASDDMTVKIWDTATVPLQNNL-ESHDNWVRSVVFSHDSRLLASA 533
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S D ++K+W DT G L GH + F + R + SA D +++
Sbjct: 534 SDDMTVKIW--DTATGS--LENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 118 (46.6 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++ FS D + L+ASG++ + IW L+ E H+++++++ F + L S
Sbjct: 349 SVRSVVFSHDSR-LIASGSNDRTVRIWETTTGLLRHTF-EDHEDSVMAVSFAHDSRRLAS 406
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS ++K+W DT G L GH + F + R + SA DR +++
Sbjct: 407 ASDGGNVKIW--DTRTGS--LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAAT 462
Query: 124 DQQSREL 130
R L
Sbjct: 463 GSLQRTL 469
Score = 116 (45.9 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++ FS D + LLAS + G + IW+ LQ +++ H++++ S+ F + ++ S
Sbjct: 308 VKSVVFSHDSR-LLASASDDGTVKIWDTATGTLQRMLK-GHNDSVRSVVFSHDSRLIASG 365
Query: 65 SADNSIKMWIFDTTDGDPRLLRFR-SGHSAPPLCIRFYANGRHILSA 110
S D ++++W +TT G LLR H + + F + R + SA
Sbjct: 366 SNDRTVRIW--ETTTG---LLRHTFEDHEDSVMAVSFAHDSRRLASA 407
Score = 107 (42.7 bits), Expect = 0.00075, Sum P(4) = 0.00075
Identities = 39/179 (21%), Positives = 81/179 (45%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVG-CSLVKIVYHR 303
+R HN V V + L+ S +++W+ L+ +E S++ + +
Sbjct: 340 QRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAH 399
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ LA+ +D ++++D + EGH D + FS D + L S+ D +++IW
Sbjct: 400 DSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWH 459
Query: 364 VI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSY 419
L R ++ H D + ++ S + ++A+A D V +W + +N++S+
Sbjct: 460 AATGSLQRTLEG-HNDW-VRSVVFSHDSRLIASASDDMT-VKIW-DTATVPLQNNLESH 514
Score = 104 (41.7 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 34/145 (23%), Positives = 61/145 (42%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLL 308
+H+ V V + L+ SA +K+WD L++ E V V + + LL
Sbjct: 513 SHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLL 572
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ +DD ++++ + F+G FS L S+ DG+++IWD+ +
Sbjct: 573 ASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYS 632
Query: 369 QIDAIHVDVSITALSLSPNMDVLAT 393
+D I + +M L T
Sbjct: 633 LRHTFDLDHEIQRIQFDKSMSSLIT 657
Score = 78 (32.5 bits), Expect = 9.2e-10, Sum P(3) = 9.2e-10
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ HD A+ S+ F + +L SAS D ++K+W DT L GH+ + F
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIW--DTATSF--LQNTLEGHNEWVKSVVFSH 315
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRA 139
+ R + SA D +++ R L + + R+
Sbjct: 316 DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRS 352
Score = 72 (30.4 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 25/111 (22%), Positives = 52/111 (46%)
Query: 252 NGEV-VGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHR-VNGLLA 309
+G V + +A T+ L+ SA G +K+WD + L+ +++ + +I + + ++ L+
Sbjct: 598 SGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHEIQRIQFDKSMSSLIT 657
Query: 310 TVAD---DLVIRLFDVVALRMV---RKFEGHTDRITDFCFSEDGKWLLSSG 354
V D + + A V + +GH R + S+D W+ +G
Sbjct: 658 NVGRIQLDARSKATEGFASSQVLDRSQAQGHHPRRQGYGLSDDFSWITWNG 708
Score = 44 (20.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL-KSRWEVGCSLVKIVYHRV 304
R Y + + + + N L + GY I ++ S +G ++V R+
Sbjct: 692 RQGYGLSDDFSWITWNGDNVLWLPPGYRPCISTVSVPPKESGTSVIGLGTKSGRVVSIRL 751
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFE 332
+GL + L++ + LR +KFE
Sbjct: 752 SGLGPSPDAPLIVAKKCIEYLRCEKKFE 779
Score = 43 (20.2 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 404 WVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSV 436
WV +FS DS + AS + ++VK+ ++V
Sbjct: 475 WVRSVVFSHDSRL--IASASDDMTVKIWDTATV 505
Score = 43 (20.2 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 404 WVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVE 437
WV +FS DS + + AS V + + S+E
Sbjct: 517 WVRSVVFSHDSRLLASASDDMTVKIWDTATGSLE 550
Score = 40 (19.1 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 21/96 (21%), Positives = 37/96 (38%)
Query: 472 LVTLSLLPKSQWQSLINLDIIKARNX-----XXXXXXXXXXAPFFLPSVPSLSGEILFKP 526
LVT+ LP S + +DI++ F + V ++ G
Sbjct: 1645 LVTIIFLPLSFMAAFFAIDIVEFPKQPDGLHLNFVSSIMSIMAFNVNKVAAVWGRFAKWI 1704
Query: 527 SESTKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEM 562
+E+T S+KV + D + + + SCAE+
Sbjct: 1705 TENTVHAISSMKVADNMVDD---DKKFEAIGSCAEL 1737
Score = 38 (18.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 115 AFRLFSVIQDQQSRELSQRHVAKRAR 140
AF LF + QS+ L+ +H+ +R R
Sbjct: 1781 AFDLF--LGRWQSKSLATKHLPERLR 1804
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 139 (54.0 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++
Sbjct: 92 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSF 149
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D +IK+W +T L S H C +F +GR I+SA D+ +L+
Sbjct: 150 VTASDDKTIKVW---STHRQKFLFSL-SQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 203
Query: 122 IQDQQSRE 129
D+ SRE
Sbjct: 204 --DKTSRE 209
Score = 138 (53.6 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 309
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 217 HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 276
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 125 (49.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 33/134 (24%), Positives = 71/134 (52%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R AVT + FS + + L ASG+ + +W++ K + ++ H +A+ ++F + +L
Sbjct: 50 RDAVTCVDFSFNMKQL-ASGSMDSCLMVWHM-KPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D ++++W+ G+ + R H+A + F ++G+ ++A D+ +++S
Sbjct: 108 ASGSRDKTVRIWV-PNIKGESTVFR---AHTATVRSVHFCSDGQSFVTASDDKTIKVWST 163
Query: 122 IQDQQSRELSQRHV 135
+ + LSQ H+
Sbjct: 164 HRQKFLFSLSQ-HI 176
Score = 125 (49.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 37/150 (24%), Positives = 65/150 (43%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S ++A IKVW + + V+ +G L+
Sbjct: 132 AHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 191
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
+ +DD ++L+D + V + H +T F G + ++GMD ++++WDV R
Sbjct: 192 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHR 251
Query: 369 QIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + ++ ALS P+ + L TA D
Sbjct: 252 LLQHYQLHSAAVNALSFHPSGNYLVTASSD 281
Score = 123 (48.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
L++SA +K+WD R+ + S E G + + +H +A D ++++DV
Sbjct: 190 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRT 249
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
R+++ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 250 HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 309
Query: 384 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 431
S + A+ D+ V +W SN D G E++ V+ P
Sbjct: 310 FSRTGEYFASGGSDEQ-VMVW--------KSNFDVIDYG-EVLRVQRP 347
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G VT + F G + A+G + + +W++ RL + H A+ +L F + L+
Sbjct: 219 GFVTYVDFHPSGTCVAAAGMDN-TVKVWDVRTHRLLQHY-QLHSAAVNALSFHPSGNYLV 276
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS+D+++K I D +G RLL GH P + F G + S G D
Sbjct: 277 TASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSD 323
Score = 82 (33.9 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ + F N L S S D+ + +W R RF +GH C+ F
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQS---RAYRF-TGHKDAVTCVNFSP 102
Query: 103 NGRHILSAG-QDRAFRLF 119
+G H+L++G +D+ R++
Sbjct: 103 SG-HLLASGSRDKTVRIW 119
Score = 55 (24.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 26/110 (23%), Positives = 40/110 (36%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
V MD VW ++ L +H + AV A + GN+ V ++ ++
Sbjct: 233 VAAAGMDNT-VKVWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLVTASSDSTLKIL 287
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+L G R Y + + H G VA T S G + VW
Sbjct: 288 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 50 (22.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 128
DP L R GH C+ F N + + S D ++ + QSR
Sbjct: 39 DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHM--KPQSR 84
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 142 (55.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 42/128 (32%), Positives = 68/128 (53%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++ L
Sbjct: 61 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSL 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W +T R L + H C +F +GR I+SA D+ +L+
Sbjct: 119 VTASDDKTVKVW---STHRQ-RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 172
Query: 122 IQDQQSRE 129
D+ SRE
Sbjct: 173 --DKTSRE 178
Score = 136 (52.9 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 309
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI 245
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 126 (49.4 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 33/134 (24%), Positives = 72/134 (53%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R AVT + FS + + L ASG+ + IW++ K + ++ H +A+ ++F + +L
Sbjct: 19 RDAVTCVDFSLNTKHL-ASGSMDSTLMIWHM-KPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D ++++W+ G+ + R H+A + F ++G+ +++A D+ +++S
Sbjct: 77 ASGSRDKTVRIWV-PNVKGESTVFR---AHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 122 IQDQQSRELSQRHV 135
+ + L+Q H+
Sbjct: 133 HRQRFLFSLTQ-HI 145
Score = 121 (47.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 37/151 (24%), Positives = 69/151 (45%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH V V S +++A +KVW + R L S + + V+ +G L
Sbjct: 101 AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQ-HINWVRCAKFSPDGRL 159
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+ + +DD ++L+D + + + H +T F G + ++GMD ++++WD
Sbjct: 160 IVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTH 219
Query: 368 RQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
R + + ++ ALS P+ + L TA D
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLITASSD 250
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G VT + F G + A+G + + +W+ RL + H A+ +L F + L+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDARTHRLLQHY-QLHSAAVNALSFHPSGNYLI 245
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS+D+++K I D +G RLL GH P + F G + S G D
Sbjct: 246 TASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 85 (35.0 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ + F N L S S D+++ +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS---RAYRF-TGHKDAVTCVNFSP 71
Query: 103 NGRHILSAG-QDRAFRLF 119
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 61 (26.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 128
DP L R GH C+ F N +H+ S D ++ + QSR
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM--KPQSR 53
Score = 51 (23.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 18/76 (23%), Positives = 29/76 (38%)
Query: 204 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 263
AV A + GN+ + ++ ++ +L G R Y + + H G VA T
Sbjct: 231 AVNALSFHPSGNYLITASSDSTLKILDLMEG--RLLY------TLHGHQGPATTVAFSRT 282
Query: 264 NTLMISAGYHGDIKVW 279
S G + VW
Sbjct: 283 GEYFASGGSDEQVMVW 298
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 138 (53.6 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++
Sbjct: 23 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W T L S H C +F +GR I+SA D+ +L+
Sbjct: 81 VTASDDKTVKVW---ATHRQKFLFSL-SQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 134
Query: 122 IQDQQSRE 129
D+ SRE
Sbjct: 135 --DKSSRE 140
Score = 137 (53.3 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 148 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 207
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 208 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 126 (49.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 32/141 (22%), Positives = 69/141 (48%)
Query: 266 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
L++SA +K+WD R+ + S E G + + +H +A D ++++DV
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 180
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
R+++ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 181 HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 240
Query: 384 LSPNMDVLATAHVDQNGVYLW 404
S + A+ D+ V +W
Sbjct: 241 FSRTGEYFASGGSDEQ-VMVW 260
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G VT + F G + A+G + + +W++ RL + H A+ L F + L+
Sbjct: 150 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHY-QLHSAAVNGLSFHPSGNYLI 207
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS+D+++K I D +G RLL GH P + F G + S G D
Sbjct: 208 TASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSD 254
Score = 92 (37.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 22/109 (20%), Positives = 57/109 (52%)
Query: 27 ISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLR 86
+ +W++ K + ++ H +A+ ++F + +L S S D ++++W+ G+ + R
Sbjct: 5 LMVWHM-KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV-PNVKGESTVFR 62
Query: 87 FRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 135
H+A + F ++G+ ++A D+ ++++ + + LSQ H+
Sbjct: 63 ---AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HI 107
Score = 49 (22.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/110 (20%), Positives = 39/110 (35%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
+ MD VW ++ L +H + AV + GN+ + ++ ++
Sbjct: 164 IAAAGMDNT-VKVWDVRTHRLLQHYQL----HSAAVNGLSFHPSGNYLITASSDSTLKIL 218
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+L G R Y + + H G VA T S G + VW
Sbjct: 219 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 138 (53.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 309
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 138 (53.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 41/128 (32%), Positives = 66/128 (51%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++
Sbjct: 61 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W +T L S H C +F +GR I+SA D+ +L+
Sbjct: 119 VTASDDKTVKVW---STHRQKFLFSL-SQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 172
Query: 122 IQDQQSRE 129
D+ SRE
Sbjct: 173 --DKTSRE 178
Score = 128 (50.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 33/134 (24%), Positives = 72/134 (53%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R AVT++ FS + + L ASG+ + +W++ K + ++ H +A+ ++F + +L
Sbjct: 19 RDAVTSVDFSLNTKQL-ASGSMDSCLMVWHM-KPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D ++++W+ G+ + R H+A + F ++G+ ++A D+ +++S
Sbjct: 77 ASGSRDKTVRIWV-PNVKGESTVFR---AHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 122 IQDQQSRELSQRHV 135
+ + LSQ H+
Sbjct: 133 HRQKFLFSLSQ-HI 145
Score = 125 (49.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/150 (24%), Positives = 65/150 (43%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S ++A +KVW + + V+ +G L+
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
+ +DD ++L+D + V + H +T F G + ++GMD ++++WDV R
Sbjct: 161 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHR 220
Query: 369 QIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + ++ ALS P+ + L TA D
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLVTASSD 250
Score = 124 (48.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
L++SA +K+WD R+ + S E G + + +H +A D ++++DV
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
R+++ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 384 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 431
S + A+ D+ V +W SN D G E++ V+ P
Sbjct: 279 FSRTGEYFASGGSDEQ-VMVW--------KSNFDIVDYG-EVLRVQRP 316
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G VT + F G + A+G + + +W++ RL + H A+ +L F + L+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHY-QLHSAAVNALSFHPSGNYLV 245
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS+D+++K I D +G RLL GH P + F G + S G D
Sbjct: 246 TASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 89 (36.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ S+ F N L S S D+ + +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKP---QTRAYRF-AGHKDAVTCVNFSP 71
Query: 103 NGRHILSAG-QDRAFRLF 119
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 54 (24.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 25/110 (22%), Positives = 40/110 (36%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
+ MD VW ++ L +H + AV A + GN+ V ++ ++
Sbjct: 202 IAAAGMDNT-VKVWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLVTASSDSTLKIL 256
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+L G R Y + + H G VA T S G + VW
Sbjct: 257 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
DP L R GH + F N + + S D
Sbjct: 8 DPSLERHFKGHRDAVTSVDFSLNTKQLASGSMD 40
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 138 (53.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++
Sbjct: 61 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W T L S H C +F +GR I+SA D+ +L+
Sbjct: 119 VTASDDKTVKVW---ATHRQKFLFSL-SQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 172
Query: 122 IQDQQSRE 129
D+ SRE
Sbjct: 173 --DKSSRE 178
Score = 137 (53.3 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 245
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 126 (49.4 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 32/141 (22%), Positives = 69/141 (48%)
Query: 266 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
L++SA +K+WD R+ + S E G + + +H +A D ++++DV
Sbjct: 159 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
R+++ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 219 HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 384 LSPNMDVLATAHVDQNGVYLW 404
S + A+ D+ V +W
Sbjct: 279 FSRTGEYFASGGSDEQ-VMVW 298
Score = 123 (48.4 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 32/134 (23%), Positives = 71/134 (52%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R AVT + FS + + L ASG+ + +W++ K + ++ H +A+ ++F + +L
Sbjct: 19 RDAVTCVDFSINTKQL-ASGSMDSCLMVWHM-KPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D ++++W+ G+ + R H+A + F ++G+ ++A D+ ++++
Sbjct: 77 ASGSRDKTVRIWV-PNVKGESTVFR---AHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 122 IQDQQSRELSQRHV 135
+ + LSQ H+
Sbjct: 133 HRQKFLFSLSQ-HI 145
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G VT + F G + A+G + + +W++ RL + H A+ L F + L+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHY-QLHSAAVNGLSFHPSGNYLI 245
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS+D+++K I D +G RLL GH P + F G + S G D
Sbjct: 246 TASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 116 (45.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/150 (23%), Positives = 64/150 (42%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S ++A +KVW + + V+ +G L+
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
+ +DD ++L+D + V + H +T F G + ++GMD ++++WDV R
Sbjct: 161 VSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHR 220
Query: 369 QIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + ++ LS P+ + L TA D
Sbjct: 221 LLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Score = 84 (34.6 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ + F N L S S D+ + +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQS---RAYRF-TGHKDAVTCVNFSP 71
Query: 103 NGRHILSAG-QDRAFRLF 119
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 52 (23.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 128
DP L R GH C+ F N + + S D ++ + QSR
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHM--KPQSR 53
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/110 (20%), Positives = 39/110 (35%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
+ MD VW ++ L +H + AV + GN+ + ++ ++
Sbjct: 202 IAAAGMDNT-VKVWDVRTHRLLQHYQL----HSAAVNGLSFHPSGNYLITASSDSTLKIL 256
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+L G R Y + + H G VA T S G + VW
Sbjct: 257 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 136 (52.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 41/128 (32%), Positives = 66/128 (51%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AV + FS G L+ASG+ + +W + + +S + +AH + S+HF ++ L
Sbjct: 62 KDAVMCVQFSPSGH-LVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSL 119
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D +IK+W T + L S H C RF +GR I SA D+ +L+
Sbjct: 120 VTASDDKTIKVW----TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW-- 173
Query: 122 IQDQQSRE 129
D+ SRE
Sbjct: 174 --DKTSRE 179
Score = 133 (51.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 38/160 (23%), Positives = 74/160 (46%)
Query: 266 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
L+ SA +K+WD R+ + S E G + +H +A D ++++DV
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRM 219
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
R+++ ++ HT + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 220 NRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVA 279
Query: 384 LSPNMDVLATAHVDQNGVYLW-VNRCMFSGDSNIDSYASG 422
S D A+ D+ V +W N D + ++ SG
Sbjct: 280 FSRTGDFFASGGSDEQ-VMVWKTNFSAADYDGVLKTHKSG 318
Score = 130 (50.8 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 31/134 (23%), Positives = 75/134 (55%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R A+T++ FS + + L ASG+ + IW++ K ++++ H +A++ + F + ++
Sbjct: 20 RDAITSVDFSLNKKQL-ASGSMDSCLKIWSM-KPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D ++ +W+ + G+ + + H+A + F ++G+ +++A D+ ++++V
Sbjct: 78 ASGSRDKTVCLWV-PSVKGESTVFK---AHTATVRSVHFSSDGQSLVTASDDKTIKVWTV 133
Query: 122 IQDQQSRELSQRHV 135
+ + LSQ H+
Sbjct: 134 HRQKFLFSLSQ-HI 146
Score = 127 (49.8 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 29/113 (25%), Positives = 51/113 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H G V + T + +AG +KVWD + L ++V + V + +H L
Sbjct: 187 HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLI 246
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T ++D +++ D++ R++ GH T FS G + S G D + +W
Sbjct: 247 TASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 121 (47.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/150 (24%), Positives = 65/150 (43%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S +++A IKVW + + V+ +G L+
Sbjct: 102 AHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLI 161
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ +DD ++L+D + + F H F G + ++G D ++++WDV + R
Sbjct: 162 ASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNR 221
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVD 397
+ V + + +LS P+ + L TA D
Sbjct: 222 LLQHYQVHTAAVNSLSFHPSGNYLITASND 251
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G + F G + A+G + +W++ RL + H A+ SL F + L+
Sbjct: 189 GFANHVEFHPSGTCIAAAGTDK-TVKVWDVRMNRLLQHY-QVHTAAVNSLSFHPSGNYLI 246
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS D+++K I D +G RLL GH P C+ F G S G D
Sbjct: 247 TASNDSTLK--ILDLLEG--RLLYTLHGHQGPATCVAFSRTGDFFASGGSD 293
Score = 84 (34.6 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRF-RSGHSAPPLCIRFYAN 103
H +AI S+ F N+ L S S D+ +K+W P++ + GH +C++F +
Sbjct: 19 HRDAITSVDFSLNKKQLASGSMDSCLKIWSMK-----PQMRAYCLVGHKDAVMCVQFSPS 73
Query: 104 GRHILSAGQDRAFRLF 119
G + S +D+ L+
Sbjct: 74 GHLVASGSRDKTVCLW 89
Score = 49 (22.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ + DP L R GH + F N + + S D +++S+
Sbjct: 5 SVEEDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSM 49
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 19/84 (22%), Positives = 31/84 (36%)
Query: 204 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 263
AV + + GN+ + + ++ +L G R Y + + H G VA T
Sbjct: 232 AVNSLSFHPSGNYLITASNDSTLKILDLLEG--RLLY------TLHGHQGPATCVAFSRT 283
Query: 264 NTLMISAGYHGDIKVW--DFKGRD 285
S G + VW +F D
Sbjct: 284 GDFFASGGSDEQVMVWKTNFSAAD 307
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 31 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 90
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 91 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 150
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 398
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 151 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 209
Query: 399 NGVYLW---VNRCM--FSGDSN 415
N + LW +C+ ++G N
Sbjct: 210 NTLKLWDYSKGKCLKTYTGHKN 231
Score = 142 (55.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 143 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 202
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 363
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 203 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261
Query: 364 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 408
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 262 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 308
Score = 125 (49.1 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + I H I + + ++ +L+S
Sbjct: 21 AVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVS 78
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K+W D + G + L+ GHS C F I+S D + R++ V
Sbjct: 79 ASDDKTLKIW--DVSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 132
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD LL S + + IW++ + ++ H N + +F +++S
Sbjct: 64 ISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSG 121
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+++W D G + L+ HS P + F +G I+S+ D R++
Sbjct: 122 SFDESVRIW--DVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 177
Query: 125 Q 125
Q
Sbjct: 178 Q 178
Score = 116 (45.9 bits), Expect = 0.00085, P = 0.00085
Identities = 38/136 (27%), Positives = 75/136 (55%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFFANEPVLM 62
V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F N ++
Sbjct: 148 VSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYIL 204
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSAGQDRAFR 117
+A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S +D
Sbjct: 205 AATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSGSEDNLVY 258
Query: 118 LFSVIQDQQSRELSQR 133
++++ Q++E+ Q+
Sbjct: 259 IWNL----QTKEIVQK 270
Score = 78 (32.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 73
Query: 105 RHILSAGQDRAFRLFSV 121
++SA D+ +++ V
Sbjct: 74 NLLVSASDDKTLKIWDV 90
Score = 49 (22.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 85 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 58
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 140 (54.3 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 265 TLMISAGYHGDIKVWDFKGRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVV 323
T + SAG +++WD + L ++V C + + +H L T + D +++ D+V
Sbjct: 199 TCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLV 258
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
R++ +GHT + FS+DG+ S G D + +W
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 133 (51.9 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ VT+L FS G LLAS + + +W L+++ S + AH + S+ F A+ L
Sbjct: 60 KDVVTSLQFSPQGN-LLASASRDKTVRLWVLDRKGKSSEFK-AHTAPVRSVDFSADGQFL 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 118 VTASEDKSIKVWSMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 122 IQDQ 125
Q
Sbjct: 174 TSKQ 177
Score = 130 (50.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 241 LDMSERSNY--AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLV 297
LD +S+ AH V V + +++A IKVW ++ R L S + V
Sbjct: 89 LDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYR-HTHWV 147
Query: 298 KIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ +G L+ + ++D I+++D + + V F FS +G + S+G D
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSD 207
Query: 357 GSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
++RIWD+ + R + V + LS P+ + L TA D
Sbjct: 208 HAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSD 249
Score = 126 (49.4 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 29/124 (23%), Positives = 69/124 (55%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ A+T+ FS + + + A+ + + +W+L K ++ H + + SL F +L
Sbjct: 18 KAAITSADFSPNCKQI-ATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++W+ D + F++ H+AP + F A+G+ +++A +D++ +++S+
Sbjct: 76 ASASRDKTVRLWVLDRKG---KSSEFKA-HTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
Query: 122 IQDQ 125
+ +
Sbjct: 132 YRQR 135
Score = 72 (30.4 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H AI S F N + +AS D + +W + R R+ GH ++F
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLW---SLKPHARAYRY-VGHKDVVTSLQFSP 70
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
G + SA +D+ RL+ + + +S E + H A
Sbjct: 71 QGNLLASASRDKTVRLWVLDRKGKSSEF-KAHTA 103
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
DP L R+ GH A F N + I +A D L+S+
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSL 47
Score = 45 (20.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 22/99 (22%), Positives = 37/99 (37%)
Query: 182 VWRLQ-NFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSY 240
+W ++ N +L + + C V + GN V ++ G ++ +L G R Y
Sbjct: 212 IWDIRMNRLLQHYQVHSC-----GVNCLSFHPSGNSLVTASSDGTVKILDLVEG--RLIY 264
Query: 241 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+ H G V V+ L S G + VW
Sbjct: 265 ------TLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 398
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 399 NGVYLW---VNRCM--FSGDSN 415
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 363
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 364 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 408
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 125 (49.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + I H I + + ++ +L+S
Sbjct: 47 AVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVS 104
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K+W D + G + L+ GHS C F I+S D + R++ V
Sbjct: 105 ASDDKTLKIW--DVSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD LL S + + IW++ + ++ H N + +F +++S
Sbjct: 90 ISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSG 147
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+++W D G + L+ HS P + F +G I+S+ D R++
Sbjct: 148 SFDESVRIW--DVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 125 Q 125
Q
Sbjct: 204 Q 204
Score = 78 (32.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 105 RHILSAGQDRAFRLFSV 121
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 85 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 398
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 399 NGVYLW---VNRCM--FSGDSN 415
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 363
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 364 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 408
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 125 (49.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + I H I + + ++ +L+S
Sbjct: 47 AVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVS 104
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K+W D + G + L+ GHS C F I+S D + R++ V
Sbjct: 105 ASDDKTLKIW--DVSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD LL S + + IW++ + ++ H N + +F +++S
Sbjct: 90 ISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSG 147
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+++W D G + L+ HS P + F +G I+S+ D R++
Sbjct: 148 SFDESVRIW--DVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 125 Q 125
Q
Sbjct: 204 Q 204
Score = 78 (32.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 105 RHILSAGQDRAFRLFSV 121
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 85 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 398
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 399 NGVYLW---VNRCM--FSGDSN 415
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 363
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 364 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 408
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 125 (49.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + I H I + + ++ +L+S
Sbjct: 47 AVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVS 104
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K+W D + G + L+ GHS C F I+S D + R++ V
Sbjct: 105 ASDDKTLKIW--DVSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD LL S + + IW++ + ++ H N + +F +++S
Sbjct: 90 ISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSG 147
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+++W D G + L+ HS P + F +G I+S+ D R++
Sbjct: 148 SFDESVRIW--DVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 125 Q 125
Q
Sbjct: 204 Q 204
Score = 78 (32.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 105 RHILSAGQDRAFRLFSV 121
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 85 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 398
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 399 NGVYLW---VNRCM--FSGDSN 415
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 363
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 364 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 408
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 125 (49.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + I H I + + ++ +L+S
Sbjct: 47 AVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVS 104
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K+W D + G + L+ GHS C F I+S D + R++ V
Sbjct: 105 ASDDKTLKIW--DVSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD LL S + + IW++ + ++ H N + +F +++S
Sbjct: 90 ISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSG 147
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+++W D G + L+ HS P + F +G I+S+ D R++
Sbjct: 148 SFDESVRIW--DVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 125 Q 125
Q
Sbjct: 204 Q 204
Score = 78 (32.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 105 RHILSAGQDRAFRLFSV 121
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 85 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 398
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 399 NGVYLW---VNRCM--FSGDSN 415
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 363
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 364 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 408
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 125 (49.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + I H I + + ++ +L+S
Sbjct: 47 AVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVS 104
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K+W D + G + L+ GHS C F I+S D + R++ V
Sbjct: 105 ASDDKTLKIW--DVSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD LL S + + IW++ + ++ H N + +F +++S
Sbjct: 90 ISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSG 147
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+++W D G + L+ HS P + F +G I+S+ D R++
Sbjct: 148 SFDESVRIW--DVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 125 Q 125
Q
Sbjct: 204 Q 204
Score = 78 (32.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 105 RHILSAGQDRAFRLFSV 121
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 85 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 135 (52.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 258 VACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLV 316
VA + T + SAG +K+WD + L ++V V V +H L T + D
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 251
Query: 317 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+++ D++ R++ +GHT + FS+ G+ S G D + +W
Sbjct: 252 LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 134 (52.2 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 33/124 (26%), Positives = 72/124 (58%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ A+T++ FS +G+ L A+G+ + +W+L + + ++ H + I S+ F +L
Sbjct: 18 KAAITSVDFSPNGKQL-ATGSWDTFLMLWSL-RPQARAFRYVGHKDVITSVQFSPLGNLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D +I++WI D + F++ H+AP + F A+G+ + SA +D++ +++++
Sbjct: 76 ASASRDRTIRLWIPDKRG---KSSEFKA-HTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Query: 122 IQDQ 125
+ +
Sbjct: 132 YRQR 135
Score = 125 (49.1 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ +T++ FS G LLAS + I +W +KR S + AH + S+ F A+ L
Sbjct: 60 KDVITSVQFSPLGN-LLASASRDRTIRLWIPDKRGKSSEFK-AHTAPVRSVDFSADGQFL 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 118 ASASEDKSIKVWNMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 122 IQDQ 125
Q
Sbjct: 174 TNKQ 177
Score = 117 (46.2 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 44/188 (23%), Positives = 84/188 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H + V L+ SA I++W R S ++ + V+ V +G LA
Sbjct: 59 HKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLA 118
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ ++D I+++++ R + HT + FS DG+ ++S D +++IWD +
Sbjct: 119 SASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 370 IDAIHVDVSITA-LSLSPNMDVLATAHVDQNGVYLW---VNRCM-----FSGDSNIDSY- 419
++ V ++ +PN +A+A D V +W VN+ + SG N S+
Sbjct: 179 VNNFSDFVGFANFVAFNPNGTCIASAGSDHT-VKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 420 ASGKEIVS 427
SG +++
Sbjct: 238 PSGNYLIT 245
Score = 73 (30.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 27/96 (28%), Positives = 42/96 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS-GHSAPPLCIRFY 101
+ H AI S+ F N L + S D + +W P+ FR GH ++F
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLR-----PQARAFRYVGHKDVITSVQFS 69
Query: 102 ANGRHILSAGQDRAFRLFSVIQDQQSRELS-QRHVA 136
G + SA +DR RL+ I D++ + + H A
Sbjct: 70 PLGNLLASASRDRTIRLW--IPDKRGKSSEFKAHTA 103
Score = 58 (25.5 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
DP L R+ GH A + F NG+ + + D L+S+
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSL 47
Score = 42 (19.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 284
H+G V V+ + +I+A G +K+ D +GR
Sbjct: 227 HSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGR 261
Score = 41 (19.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 16/75 (21%), Positives = 28/75 (37%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V + GN+ + ++ G ++ +L G R Y + H G V V+
Sbjct: 231 VNCVSFHPSGNYLITASSDGTLKILDLLEG--RLIY------TLQGHTGPVFTVSFSKGG 282
Query: 265 TLMISAGYHGDIKVW 279
L S G + +W
Sbjct: 283 ELFTSGGADAQVLLW 297
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 146 (56.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLL 308
H+ V+ VA L+ S IK+WD LK G S ++ +V+ LL
Sbjct: 154 HSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLG-GHSNWVLPLVFSPDGRLL 212
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA- 367
A+ ++D I+L+D + + EGH+++I FS +G+ L S D ++++WD
Sbjct: 213 ASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGS 272
Query: 368 -RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
R H D+ ++ + SP+ +L + D N + LW
Sbjct: 273 FRHTLKGHSDMVLSVV-FSPDSQLLESGSGD-NTIKLW 308
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V L FS DG+ LLASG++ I +W+ L+ + E H N I SL F N +L S
Sbjct: 200 VLPLVFSPDGR-LLASGSNDATIKLWDPPSGSLKHTL-EGHSNKIESLAFSPNGQLLASG 257
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S+D +IK+W DT G R GHS L + F + + + S D +L+
Sbjct: 258 SSDATIKLW--DTATGSFR--HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/115 (33%), Positives = 57/115 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++AFS DGQ LLASG++ I +W+ L+ + H N ++ L F + +L S
Sbjct: 158 VLSVAFSPDGQ-LLASGSAEKTIKLWDSATCGLKHTLG-GHSNWVLPLVFSPDGRLLASG 215
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S D +IK+W D G L GHS + F NG+ + S D +L+
Sbjct: 216 SNDATIKLW--DPPSGS--LKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLW 266
Score = 124 (48.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 31/114 (27%), Positives = 52/114 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H+ V+ + L+ S IK+WD LK E + ++ + NG LLA
Sbjct: 196 HSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLA 255
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ + D I+L+D +GH+D + FS D + L S D ++++WD
Sbjct: 256 SGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 120 (47.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ + FS DG+ LLASG++ I +W+ L+ + E H +++ S+ F N +L S
Sbjct: 44 IETVTFSPDGR-LLASGSNDTTIKLWDPASGGLKQTL-EGHSSSVQSVAFSPNGQLLASG 101
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGR 105
S+D +IK+W L GHS + F NG+
Sbjct: 102 SSDTTIKLW----NSASDSLKHTMEGHSDRVESVAFSPNGQ 138
Score = 87 (35.7 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H + I ++ F + +L S S D +IK+W D G L + GHS+ + F
Sbjct: 38 EGHSDWIETVTFSPDGRLLASGSNDTTIKLW--DPASGG--LKQTLEGHSSSVQSVAFSP 93
Query: 103 NGRHILSAGQDRAFRLFSVIQD 124
NG+ + S D +L++ D
Sbjct: 94 NGQLLASGSSDTTIKLWNSASD 115
Score = 85 (35.0 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFAN 57
+V ++AFS +GQ LLASG+S I +WN L+ + E H + + S+ F N
Sbjct: 85 SVQSVAFSPNGQ-LLASGSSDTTIKLWNSASDSLKHTM-EGHSDRVESVAFSPN 136
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 85 LRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
L+ GHS + F +GR + S D +L+
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLW 68
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 151 (58.2 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +H + + T + D R++DV VR F GHT+ + S DG+WL S G DG
Sbjct: 607 VEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGI 666
Query: 359 LRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ +WD+ R++ ++ H S+ +L+ S + VL + D N V +W
Sbjct: 667 ICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCAD-NSVRVW 713
Score = 123 (48.4 bits), Expect = 0.00064, P = 0.00064
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNA-IISLHFFANEPVL 61
+V LA S DG+ LASG G+I +W++ RRL+S+ H A + SL F + VL
Sbjct: 645 SVNCLAVSPDGR-WLASGGEDGIICVWDIGSGRRLKSM--RGHARASLYSLAFSRDGTVL 701
Query: 62 MSASADNSIKMWIF--DTTDGDP 82
+S ADNS+++W +T D P
Sbjct: 702 VSGCADNSVRVWDVKKNTNDAGP 724
Score = 120 (47.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 31/129 (24%), Positives = 63/129 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE-------------AHDNAIIS 51
+T + F+ D L+A+G I +W+L+ + L+SV++ H +
Sbjct: 464 MTCIEFNDDST-LVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYG 522
Query: 52 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 111
+ F + L+S S D ++++W DT L+ ++ GH+ P ++F G + ++A
Sbjct: 523 VSFSPDNKYLLSCSEDKTVRLWSLDTYTA---LVSYK-GHTQPVWDVKFSPLGHYFVTAS 578
Query: 112 QDRAFRLFS 120
D+ RL++
Sbjct: 579 HDQTARLWA 587
Score = 99 (39.9 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V ++FS D + LL S + + +W+L+ V + H + + F +
Sbjct: 518 GPVYGVSFSPDNKYLL-SCSEDKTVRLWSLDTYTAL-VSYKGHTQPVWDVKFSPLGHYFV 575
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+AS D + ++W D P LR +GH C+ F+ N ++ + D+ R++ V
Sbjct: 576 TASHDQTARLWATDHIY--P--LRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDV 630
Score = 91 (37.1 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDR-ITDFCFSEDGKWLLSSGMDGSLRIWDV 364
LA+ +D +I ++D+ + R ++ GH + FS DG L+S D S+R+WDV
Sbjct: 658 LASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Score = 76 (31.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/74 (32%), Positives = 33/74 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKS-RWEVGCSLVKIVYHRVNGLL 308
H V +A + S G G I VWD GR LKS R SL + + R +L
Sbjct: 642 HTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVL 701
Query: 309 ATVADDLVIRLFDV 322
+ D +R++DV
Sbjct: 702 VSGCADNSVRVWDV 715
Score = 68 (29.0 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 55 FANEPVLMSAS-ADNSIKMWIFDTTDGDPRLLRFRS----------GHSAPPLCIRFYAN 103
F ++ L++A D+ IK+W D L R R GHS P + F +
Sbjct: 469 FNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPD 528
Query: 104 GRHILSAGQDRAFRLFSV 121
+++LS +D+ RL+S+
Sbjct: 529 NKYLLSCSEDKTVRLWSL 546
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 155 (59.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 46/186 (24%), Positives = 88/186 (47%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 398
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 399 NGVYLW 404
N + LW
Sbjct: 236 NTLKLW 241
Score = 134 (52.2 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 43/168 (25%), Positives = 83/168 (49%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 363
+LA D+ ++L+D + ++ + H ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 364 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 408
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEVVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 125 (49.1 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + I H I + + ++ +L+S
Sbjct: 47 AVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVS 104
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K+W D + G + L+ GHS C F I+S D + R++ V
Sbjct: 105 ASDDKTLKIW--DVSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD LL S + + IW++ + ++ H N + +F +++S
Sbjct: 90 ISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSG 147
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+++W D G + L+ HS P + F +G I+S+ D R++
Sbjct: 148 SFDESVRIW--DVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 125 Q 125
Q
Sbjct: 204 Q 204
Score = 106 (42.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 25/115 (21%), Positives = 60/115 (52%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H+ V + + L++S + +++WD K G+ LK+ + + ++R L+
Sbjct: 128 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWD 363
+ + D + R++D + + ++ + F FS +GK++L++ +D +L++WD
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 78 (32.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 105 RHILSAGQDRAFRLFSV 121
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 85 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 132 (51.5 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 31/124 (25%), Positives = 69/124 (55%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ A+T+L S +G+ L A+ + + +WN K ++ H + + S+ F + +L
Sbjct: 18 KAAITSLDLSPNGKQL-ATASWDTFLMLWNF-KPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++WI D + F++ H+AP + F A+G+ + +A +D++ +++S+
Sbjct: 76 ASASRDRTVRLWIPDKRG---KFSEFKA-HTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 122 IQDQ 125
+ +
Sbjct: 132 YRQR 135
Score = 129 (50.5 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 263 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFD 321
+ T + SAG +KVWD + L ++V V + +H + L T + D +++ D
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
++ R++ +GHT + FS+ G+ S G D + +W
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 123 (48.4 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ VT++ FS G LLAS + + +W +KR S + AH + S+ F A+ L
Sbjct: 60 KDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFK-AHTAPVRSVDFSADGQFL 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 118 ATASEDKSIKVWSMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 122 IQDQ 125
Q
Sbjct: 174 TNKQ 177
Score = 108 (43.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 35/151 (23%), Positives = 65/151 (43%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH V V + + +A IKVW ++ R L S + V+ +G L
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRL 158
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+ + ++D I+++D + V F F+ G + S+G D ++++WDV +
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Query: 368 RQIDAIHVDVS-ITALSLSPNMDVLATAHVD 397
+ + V + +S P+ + L TA D
Sbjct: 219 KLLQHYQVHSGGVNCISFHPSDNYLVTASSD 249
Score = 80 (33.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H AI SL N L +AS D + +W F R R+ GH ++F
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKP---HARAYRY-VGHKDVVTSVQFSP 70
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSR 128
+G + SA +DR RL+ I D++ +
Sbjct: 71 HGNLLASASRDRTVRLW--IPDKRGK 94
Score = 51 (23.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
DP L R+ GH A + NG+ + +A D L++
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWN 46
Score = 41 (19.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 284
H+G V ++ ++ +++A G +K+ D +GR
Sbjct: 227 HSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGR 261
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 153 (58.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 45/186 (24%), Positives = 94/186 (50%)
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 296
G+Y +++ Y H+ E+ VA S ++ ++SA +KVWD + G+ LK+ +
Sbjct: 67 GAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFV 126
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
++ + L+ + + D +++++V + ++ H+D I+ F+ +G ++S D
Sbjct: 127 FCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYD 186
Query: 357 GSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLWV---NRCM-- 409
G RIWD + + + + + ++ + SPN + TA +D N + LW RC+
Sbjct: 187 GLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLD-NTLKLWDYSRGRCLKT 245
Query: 410 FSGDSN 415
++G N
Sbjct: 246 YTGHKN 251
Score = 148 (57.2 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 43/167 (25%), Positives = 83/167 (49%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH+ + V + +L++S Y G ++WD G+ L++ + G V V NG
Sbjct: 163 AHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKY 222
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FSEDG-KWLLSSGMDGSLRIWDV 364
+ T D ++L+D R ++ + GH ++ F FS G KW++S D + IW++
Sbjct: 223 ILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 408
+ + H DV I+A + P +++A+A ++ + + +W + C
Sbjct: 283 QTKEIVQRLQGHTDVVISA-ACHPTKNIIASAALENDKTIKVWSSDC 328
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 32/127 (25%), Positives = 59/127 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD L+ S + + +W++ + ++ H + + F +++S
Sbjct: 84 ISDVAWSSDSSRLV-SASDDKTLKVWDMRSGKCLKTLK-GHSDFVFCCDFNPPSNLIVSG 141
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+K+W T G + L+ S HS P + F NG I+S D R++
Sbjct: 142 SFDESVKIWEVKT--G--KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASG 197
Query: 125 QQSRELS 131
Q R L+
Sbjct: 198 QCLRTLA 204
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 32/132 (24%), Positives = 68/132 (51%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++A+ F+ +G L+ SG+ G+ IW+ + + + + + + F N +++A
Sbjct: 168 ISAVNFNCNGS-LIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTA 226
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI--RFYANGRH-ILSAGQDRAFRLFSV 121
+ DN++K+W D + G R L+ +GH C+ F GR ++S +D ++++
Sbjct: 227 TLDNTLKLW--DYSRG--RCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
Query: 122 IQDQQSRELSQR 133
Q++E+ QR
Sbjct: 283 ----QTKEIVQR 290
Score = 105 (42.0 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 32/118 (27%), Positives = 57/118 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
A++++ FS +G+ LAS A+ +I IW + + H I + + ++ L+S
Sbjct: 41 AISSVKFSPNGE-WLASSAADALIIIWGAYDGNCKKTLY-GHSLEISDVAWSSDSSRLVS 98
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K+W D G + L+ GHS C F I+S D + +++ V
Sbjct: 99 ASDDKTLKVW--DMRSG--KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Score = 66 (28.3 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H AI S+ F N L S++AD I +W DG+ + + GHS + + ++
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIW--GAYDGNCKKTLY--GHSLEISDVAWSSDS 93
Query: 105 RHILSAGQDRAFRLFSV 121
++SA D+ +++ +
Sbjct: 94 SRLVSASDDKTLKVWDM 110
Score = 45 (20.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQD 113
+GHSA ++F NG + S+ D
Sbjct: 36 AGHSAAISSVKFSPNGEWLASSAAD 60
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 132 (51.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 31/124 (25%), Positives = 69/124 (55%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ A+T+L S +G+ L A+ + + +WN K ++ H + + S+ F + +L
Sbjct: 18 KAAITSLDLSPNGKQL-ATASWDTFLMLWNF-KPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++WI D + F++ H+AP + F A+G+ + +A +D++ +++S+
Sbjct: 76 ASASRDRTVRLWIPDKRG---KFSEFKA-HTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 122 IQDQ 125
+ +
Sbjct: 132 YRQR 135
Score = 127 (49.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 263 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFD 321
+ T + SAG +KVWD + L ++V V + +H L T + D +++ D
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 256
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
++ R++ +GHT + FS+ G+ S G D + +W
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 123 (48.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ VT++ FS G LLAS + + +W +KR S + AH + S+ F A+ L
Sbjct: 60 KDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFK-AHTAPVRSVDFSADGQFL 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 118 ATASEDKSIKVWSMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 122 IQDQ 125
Q
Sbjct: 174 TNKQ 177
Score = 107 (42.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 35/151 (23%), Positives = 65/151 (43%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH V V + + +A IKVW ++ R L S + V+ +G L
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRL 158
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+ + ++D I+++D + V F F+ G + S+G D ++++WDV +
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Query: 368 RQIDAIHVDVS-ITALSLSPNMDVLATAHVD 397
+ + V + +S P+ + L TA D
Sbjct: 219 KLLQHYQVHSGGVNCISFHPSGNYLITASSD 249
Score = 80 (33.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H AI SL N L +AS D + +W F R R+ GH ++F
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKP---HARAYRY-VGHKDVVTSVQFSP 70
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSR 128
+G + SA +DR RL+ I D++ +
Sbjct: 71 HGNLLASASRDRTVRLW--IPDKRGK 94
Score = 51 (23.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
DP L R+ GH A + NG+ + +A D L++
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWN 46
Score = 41 (19.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 284
H+G V ++ + +I+A G +K+ D +GR
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGR 261
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/75 (21%), Positives = 28/75 (37%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V + GN+ + ++ G ++ +L G R Y + H G V V+
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILDLLEG--RLIY------TLQGHTGPVFTVSFSKGG 282
Query: 265 TLMISAGYHGDIKVW 279
L S G + +W
Sbjct: 283 ELFASGGADTQVLLW 297
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 154 (59.3 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 43/156 (27%), Positives = 73/156 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H V V + L+ SA +K+WD L+ E V+ +++ + LLA
Sbjct: 378 HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 437
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ +DD ++++D + EGH D + FS D + L S+ D ++RIWD
Sbjct: 438 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSH 497
Query: 370 IDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
+ S +T++S S + +LA+A DQ V +W
Sbjct: 498 KHTLEGHSSLVTSVSFSHDSRLLASASNDQT-VRIW 532
Score = 145 (56.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 39/134 (29%), Positives = 64/134 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H V V + L+ SA +K+WD L+ E V+ +++ + LLA
Sbjct: 420 HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLA 479
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ +DD +R++D EGH+ +T FS D + L S+ D ++RIWD I AR
Sbjct: 480 SASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD-IEARS 538
Query: 370 ID-AIHVDVSITAL 382
+ +D +I A+
Sbjct: 539 LQHTFDLDATIEAM 552
Score = 145 (56.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 42/158 (26%), Positives = 77/158 (48%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H V+ V+ + L+ SA +K+WD + L+ E LV+ +++ + LLA
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLA 354
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---IL 366
+ A D ++++D + EGH D + FS D + L S+ D +++IWD L
Sbjct: 355 S-ASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 413
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++ H D + ++ S + +LA+A D + V +W
Sbjct: 414 QHTLEG-HRDW-VRSVIFSHDSQLLASAS-DDSTVKIW 448
Score = 131 (51.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 41/158 (25%), Positives = 75/158 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H+ V V + L+ SA +K+WD L+ E V+ +++ + LLA
Sbjct: 337 HSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 395
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---IL 366
+ +DD ++++D + EGH D + FS D + L S+ D +++IWD L
Sbjct: 396 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++ H D + ++ S + +LA+A D+ V +W
Sbjct: 456 QHTLEG-HRDW-VRSVIFSHDSRLLASASDDRT-VRIW 490
Score = 130 (50.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R V ++ FS D Q LLAS + + IW+ LQ + E H + + S+ F + +L
Sbjct: 421 RDWVRSVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSRLL 478
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++W DT G + GHS+ + F + R + SA D+ R++ +
Sbjct: 479 ASASDDRTVRIW--DTEKGSHK--HTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDI 534
Score = 125 (49.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R V ++ FS D Q LLAS + + IW+ LQ + E H + + S+ F + +L
Sbjct: 379 RDWVRSVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSQLL 436
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
SAS D+++K+W DT G L GH + F + R + SA DR R++
Sbjct: 437 ASASDDSTVKIW--DTGTGS--LQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIW 490
Score = 113 (44.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 31/116 (26%), Positives = 62/116 (53%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++++S D + LLAS + + IW+ E LQ + E H + + S+ F+++ L++
Sbjct: 298 AVLSVSYSHDSR-LLASASDDRTVKIWDTETGSLQHTL-EGHSDLVRSV-IFSHDSRLLA 354
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+++D+++K+W DT G L GH + F + + + SA D +++
Sbjct: 355 SASDSTVKIW--DTGTGS--LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Score = 105 (42.0 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++ FS D + LLAS AS + IW+ LQ + E H + + S+ F + +L SA
Sbjct: 341 VRSVIFSHDSR-LLAS-ASDSTVKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSQLLASA 397
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S D+++K+W DT G L GH + F + + + SA D +++
Sbjct: 398 SDDSTVKIW--DTGTGS--LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 448
Score = 80 (33.2 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H+ A++S+ + + +L SAS D ++K+W DT G L GHS + F
Sbjct: 293 EGHEAAVLSVSYSHDSRLLASASDDRTVKIW--DTETGS--LQHTLEGHSDLVRSVIFSH 348
Query: 103 NGRHILSAGQDRAFRLF 119
+ R +L++ D +++
Sbjct: 349 DSR-LLASASDSTVKIW 364
Score = 63 (27.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 310
H+ V V+ + L+ SA +++WD + R L+ +++ ++ + + + L
Sbjct: 504 HSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDATIEAMRFDKATSLWIQ 563
Query: 311 VADDLVIR 318
V IR
Sbjct: 564 VTVKASIR 571
Score = 47 (21.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 85 LRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
L+ GH A L + + + R + SA DR +++
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIW 323
Score = 40 (19.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 404 WVNRCMFSGDSNIDSYASGKEIVSV 428
WV +FS DS + + AS V +
Sbjct: 465 WVRSVIFSHDSRLLASASDDRTVRI 489
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 171 (65.3 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 56/185 (30%), Positives = 93/185 (50%)
Query: 262 STNTLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIR 318
S +L ++G H ++W F R R G + + +H + LAT + D +R
Sbjct: 411 SPYSLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 469
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHV 375
L+ VR F GH + FS +GK+L S+G D L++WD+ L +++ H
Sbjct: 470 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HT 528
Query: 376 DVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSS 435
D +IT+L+ SP+ ++A+A +D N V +W R + + D +SG E+V V +S+
Sbjct: 529 D-NITSLTFSPDSSLIASASMD-NSVRVWDIRNTYCS-TPADG-SSG-ELVGVYTGQMSN 583
Query: 436 VEGCQ 440
V Q
Sbjct: 584 VLSVQ 588
Score = 113 (44.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + F +D LL+ I W+L +V+ + H + L
Sbjct: 361 GPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFT-NTVLYQGHAYPVWDLDISPYSLYFA 418
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S S D + ++W FD T P LR +GH A C++F+ N ++ + D+ RL+S
Sbjct: 419 SGSHDRTARLWSFDRTY--P--LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 474
Query: 123 QDQQSR 128
Q R
Sbjct: 475 QGNSVR 480
Score = 92 (37.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 362
+GLL+ ++D+ IR +D+ + ++GH + D S + S D + R+W
Sbjct: 373 SGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSF 431
Query: 363 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 432 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 471
Score = 85 (35.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
S LLA+G + I +W+L ++L+S E H + +H + ++ D
Sbjct: 295 SPDSKLLAAGFDNSCIKLWSLRSKKLKS---EPHQVDVSRIHLACD---ILEEEDDED-- 346
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
D + ++LR GH P RF A+ +LS +D + R + +
Sbjct: 347 ----DNAGTEMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 389
Score = 66 (28.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 41 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 100
I H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 355 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDLDI 410
Query: 101 YANGRHILSAGQDRAFRLFS 120
+ S DR RL+S
Sbjct: 411 SPYSLYFASGSHDRTARLWS 430
Score = 64 (27.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 309
H G V+ +A + SAG +K+WD L ++ + + + L+A
Sbjct: 485 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA 544
Query: 310 TVADDLVIRLFDV 322
+ + D +R++D+
Sbjct: 545 SASMDNSVRVWDI 557
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 170 (64.9 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 55/185 (29%), Positives = 91/185 (49%)
Query: 262 STNTLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIR 318
S +L ++G H ++W F R R G + + +H + LAT + D +R
Sbjct: 393 SPYSLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHV 375
L+ VR F GH + FS +GK+L S+G D L++WD+ L +++ H
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HT 510
Query: 376 DVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSS 435
D +IT+L+ SP+ ++A+A +D N V +W R + + D S E+V V +S+
Sbjct: 511 D-NITSLTFSPDSGLIASASMD-NSVRVWDIRNTYCS-APADG--SSSELVGVYTGQMSN 565
Query: 436 VEGCQ 440
V Q
Sbjct: 566 VLSVQ 570
Score = 113 (44.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + F +D LL+ I W+L +V+ + H + L
Sbjct: 343 GPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFT-NTVLYQGHAYPVWDLDISPYSLYFA 400
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S S D + ++W FD T P LR +GH A C++F+ N ++ + D+ RL+S
Sbjct: 401 SGSHDRTARLWSFDRTY--P--LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Query: 123 QDQQSR 128
Q R
Sbjct: 457 QGNSVR 462
Score = 92 (37.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 362
+GLL+ ++D+ IR +D+ + ++GH + D S + S D + R+W
Sbjct: 355 SGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSF 413
Query: 363 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 414 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 453
Score = 85 (35.0 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
S LLA+G + I +W+L ++L+S E H + +H + ++ D
Sbjct: 277 SPDSKLLAAGFDNSCIKLWSLRSKKLKS---EPHQVDVSRIHLACD---ILEEEDDED-- 328
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
D + ++LR GH P RF A+ +LS +D + R + +
Sbjct: 329 ----DNAGTEMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
Score = 70 (29.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 309
H G V+ +A + SAG +K+WD L ++ + + +GL+A
Sbjct: 467 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIA 526
Query: 310 TVADDLVIRLFDV 322
+ + D +R++D+
Sbjct: 527 SASMDNSVRVWDI 539
Score = 66 (28.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 41 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 100
I H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDLDI 392
Query: 101 YANGRHILSAGQDRAFRLFS 120
+ S DR RL+S
Sbjct: 393 SPYSLYFASGSHDRTARLWS 412
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 130 (50.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 37/157 (23%), Positives = 73/157 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H + VA S ++SA +K+WD + G +K+ + ++ + ++
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIV 129
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D +R++DV + ++ H+D +T F+ DG ++SS DG RIWD
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHC 189
Query: 370 IDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLW 404
+ + D + ++ + SPN + +D N + LW
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTLD-NTLRLW 225
Score = 126 (49.4 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRR--LQSVIRE--AHDNAIISLHFFANEP 59
AV+++ FSSDG+ LLAS ++ I + + + ++E H+N I + F ++
Sbjct: 26 AVSSVKFSSDGR-LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDAR 84
Query: 60 VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
++SAS D ++K+W D G L++ GH+ C+ F I+S D R++
Sbjct: 85 FIVSASDDKTLKLW--DVETGS--LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIW 140
Query: 120 SV 121
V
Sbjct: 141 DV 142
Score = 122 (48.0 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 35/167 (20%), Positives = 80/167 (47%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLL 308
AH+ V V + +L++S+ Y G ++WD G +K+ + V V NG
Sbjct: 153 AHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKF 212
Query: 309 ATVAD-DLVIRLFDVVALRMVRKFEGHTDRITDFCFSE-----DGKWLLSSGMDGSLRIW 362
V D +RL+++ + + ++ + GH + +C S +GK ++S D + +W
Sbjct: 213 ILVGTLDNTLRLWNISSAKFLKTYTGHVN--AQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 363 DVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNR 407
++ + + + H + ++ ++ P +++A+ +D+ V +W +
Sbjct: 271 ELNSKKLLQKLEGHTE-TVMNVACHPTENLIASGSLDKT-VRIWTQK 315
Score = 98 (39.6 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 32/161 (19%), Positives = 75/161 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V + + +++S + +++WD G+ LK + + ++R L+
Sbjct: 112 HTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV 171
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWDVILAR 368
+ + D + R++D V+ + F FS +GK++L +D +LR+W++ A+
Sbjct: 172 SSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Query: 369 QIDAI--HVDVSI---TALSLSPNMDVLATAHVDQNGVYLW 404
+ HV+ +A S++ +++ + + N V++W
Sbjct: 232 FLKTYTGHVNAQYCISSAFSVTNGKRIVSGS--EDNCVHMW 270
Score = 93 (37.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 44 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDP--RLLRFRSGHSAPPLCIRFY 101
+H+ A+ S+ F ++ +L SASAD +I+ + +T + DP ++ +GH + F
Sbjct: 22 SHNRAVSSVKFSSDGRLLASASADKTIRTYTINTIN-DPIAEPVQEFTGHENGISDVAFS 80
Query: 102 ANGRHILSAGQDRAFRLFSV 121
++ R I+SA D+ +L+ V
Sbjct: 81 SDARFIVSASDDKTLKLWDV 100
Score = 62 (26.9 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 26/123 (21%), Positives = 50/123 (40%)
Query: 200 ENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVA 259
ENP V S G F ++GT + +N+ S +Y + + + + A
Sbjct: 197 ENPP-VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTY------TGHVNAQYCISSA 249
Query: 260 CDSTNTLMISAGYHGD-IKVWDFKGRDLKSRWEVGCSLV-KIVYHRVNGLLATVADDLVI 317
TN I +G + + +W+ + L + E V + H L+A+ + D +
Sbjct: 250 FSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 318 RLF 320
R++
Sbjct: 310 RIW 312
Score = 49 (22.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ H+ ++F ++GR + SA D+ R +++
Sbjct: 21 TSHNRAVSSVKFSSDGRLLASASADKTIRTYTI 53
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 172 (65.6 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 53/177 (29%), Positives = 87/177 (49%)
Query: 269 SAGYHGDIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIRLFDVVALR 326
SA + ++W F R R G + + +H + LAT + D +RL+
Sbjct: 397 SASHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 455
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHVDVSITALS 383
VR F GH + FS +GK+L S+G D L++WD+ L +++ H D +IT+L+
Sbjct: 456 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HTD-NITSLT 513
Query: 384 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQ 440
SP+ ++A+A +D N V +W R S + + S E+V V +S+V Q
Sbjct: 514 FSPDSSLVASASMD-NSVRVWDIR---SSHCSTPADGSSSELVGVYTGQMSNVLSVQ 566
Score = 120 (47.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + F +D LL+ I W+L +V+ + H + L +
Sbjct: 339 GPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFT-NTVLYQGHAYPVWDLDISPHSLYFA 396
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
SAS D + ++W FD T P LR +GH A C++F+ N ++ + D+ RL+S
Sbjct: 397 SASHDRTARLWSFDRTY--P--LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQ 452
Query: 123 QDQQSR 128
Q R
Sbjct: 453 QGNSVR 458
Score = 95 (38.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 362
+GLL+ ++D+ IR +D+ + ++GH + D S + S+ D + R+W
Sbjct: 351 SGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSF 409
Query: 363 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 410 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 449
Score = 81 (33.6 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 27/110 (24%), Positives = 47/110 (42%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
S LLA+G + I +W+L ++L+S E H + +H + + D
Sbjct: 273 SPDSKLLAAGFDNSCIKLWSLRSKKLKS---EPHQVDVSRIHLACD---FLEEEDDED-- 324
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
D + ++LR GH P RF A+ +LS +D + R + +
Sbjct: 325 ----DNLGTEMKVLR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 367
Score = 73 (30.8 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 25/81 (30%), Positives = 36/81 (44%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 99
V+R H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 333 VLR-GHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDLD 387
Query: 100 FYANGRHILSAGQDRAFRLFS 120
+ + SA DR RL+S
Sbjct: 388 ISPHSLYFASASHDRTARLWS 408
Score = 63 (27.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 309
H G V+ +A + SAG +K+WD L ++ + + + L+A
Sbjct: 463 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVA 522
Query: 310 TVADDLVIRLFDV 322
+ + D +R++D+
Sbjct: 523 SASMDNSVRVWDI 535
Score = 47 (21.6 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK 282
H + + ++L+ SA ++VWD +
Sbjct: 505 HTDNITSLTFSPDSSLVASASMDNSVRVWDIR 536
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 174 (66.3 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 55/181 (30%), Positives = 87/181 (48%)
Query: 265 TLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIRLFD 321
+L ++G H ++W F R R G + + +H + LAT + D +RL+
Sbjct: 396 SLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSI 379
VR F GH + FS +GK+L S+G D L++WD+ + H D SI
Sbjct: 455 AQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTD-SI 513
Query: 380 TALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGC 439
T+L+ SP+ ++A+A +D N V +W R S N + S E+V V +S+V
Sbjct: 514 TSLAFSPDSGLIASASMD-NSVRVWDIR---STCCNTPADGSSGELVGVYTGQMSNVLSV 569
Query: 440 Q 440
Q
Sbjct: 570 Q 570
Score = 91 (37.1 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 362
+GLL+ ++D+ IR +D+ + ++GH + D S + S D + R+W
Sbjct: 355 SGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSF 413
Query: 363 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 414 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 453
Score = 79 (32.9 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 33/113 (29%), Positives = 52/113 (46%)
Query: 11 SSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH--DNAIISLHFFANEPVLMSASADN 68
SSD + LLA+G + I +W+L ++L+S E H D + I L E +N
Sbjct: 277 SSDSK-LLAAGFDNSCIKLWSLRSKKLKS---EPHHVDTSRIRLACDTLE------EEEN 326
Query: 69 SIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
D T + ++LR GH P RF A+ +LS +D + R + +
Sbjct: 327 EE-----DNTGTEMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
Score = 66 (28.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 41 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 100
I H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDVDI 392
Query: 101 YANGRHILSAGQDRAFRLFS 120
+ S DR RL+S
Sbjct: 393 SPFSLYFASGSHDRTARLWS 412
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 127 (49.8 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 263 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFD 321
+ T + SAG +KVWD + L ++V V + +H L T + D +++ D
Sbjct: 155 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 214
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
++ R++ +GHT + FS+ G+ S G D + +W
Sbjct: 215 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 123 (48.4 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ VT++ FS G LLAS + + +W +KR S + AH + S+ F A+ L
Sbjct: 18 KDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFK-AHTAPVRSVDFSADGQFL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 76 ATASEDKSIKVWSMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 131
Query: 122 IQDQ 125
Q
Sbjct: 132 TNKQ 135
Score = 118 (46.6 bits), Expect = 0.00096, P = 0.00096
Identities = 45/188 (23%), Positives = 83/188 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H V V L+ SA +++W R S ++ + V+ V +G LA
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLA 76
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
T ++D I+++ + R + HT + FS DG+ ++S D +++IWD +
Sbjct: 77 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 136
Query: 370 IDAIHVDVSITA-LSLSPNMDVLATAHVDQNGVYLW---VNRCM-----FSGDSN-IDSY 419
++ V + +P+ +A+A DQ V +W VN+ + SG N I +
Sbjct: 137 VNNFSDSVGFANFVDFNPSGTCIASAGSDQT-VKVWDVRVNKLLQHYQVHSGGVNCISFH 195
Query: 420 ASGKEIVS 427
SG +++
Sbjct: 196 PSGNYLIT 203
Score = 109 (43.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 24/97 (24%), Positives = 54/97 (55%)
Query: 29 IWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFR 88
+WN K ++ H + + S+ F + +L SAS D ++++WI D + F+
Sbjct: 2 LWNF-KPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG---KFSEFK 57
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 125
+ H+AP + F A+G+ + +A +D++ +++S+ + +
Sbjct: 58 A-HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQR 93
Score = 41 (19.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 284
H+G V ++ + +I+A G +K+ D +GR
Sbjct: 185 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGR 219
Score = 39 (18.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 16/75 (21%), Positives = 28/75 (37%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V + GN+ + ++ G ++ +L G R Y + H G V V+
Sbjct: 189 VNCISFHPSGNYLITASSDGTLKILDLLEG--RLIY------TLQGHTGPVFTVSFSKGG 240
Query: 265 TLMISAGYHGDIKVW 279
L S G + +W
Sbjct: 241 ELFASGGADTQVLLW 255
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 125 (49.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 308
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 322 HQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 380
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 381 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 124 (48.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF---FANEPV- 60
V ++++S DG+ L ASG +G I +W+ + + H I L + AN
Sbjct: 110 VLSISWSPDGKTL-ASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECR 168
Query: 61 -LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ S+S D S+++W DTT G R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 169 YMASSSKDGSVRVW--DTTAG--RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 223
Score = 92 (37.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 25/104 (24%), Positives = 52/104 (50%)
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++++ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 328 QVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 387
Query: 358 SLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 398
+L++WDV LA + H D + A+ SP+ +A+ D+
Sbjct: 388 TLKVWDVKAQKLAADLPG-HAD-EVYAVDWSPDGQRVASGGKDK 429
Score = 80 (33.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++AFS G+ LASG+ + W+L + H + ++S+ + + L S
Sbjct: 67 AVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPHFTC-QGHRHWVLSISWSPDGKTLAS 124
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF---YANG--RHILSAGQDRAFRL 118
+ I +W D + G ++ R +GHS + + +AN R++ S+ +D + R+
Sbjct: 125 GCKNGQILLW--DPSTGK-QVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRV 181
Query: 119 FSVIQDQQSRELS 131
+ + R L+
Sbjct: 182 WDTTAGRCERILT 194
Score = 76 (31.8 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+AS + G + +W+ R + ++ H ++ L + + +L SAS D +IK+W
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILT-GHTQSVTCLRW-GGDGLLYSASQDRTIKVW--RA 225
Query: 78 TDGDPRLLRFRSGH 91
DG L R GH
Sbjct: 226 HDGV--LCRTLQGH 237
Score = 69 (29.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 20/100 (20%), Positives = 47/100 (47%)
Query: 308 LATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
L + +DD + ++ + + + GH I FS D + + S+ D S+++WD
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + ++ HV ++ ++ S + +L + D + +W
Sbjct: 355 GKYLASLRGHV-AAVYQIAWSADSRLLVSGSSDST-LKVW 392
Score = 64 (27.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 62 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--QGHRHWVLSISWSP 117
Query: 103 NGRHILS 109
+G+ + S
Sbjct: 118 DGKTLAS 124
Score = 44 (20.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GHS + + F G+++ S D R + +
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 94
Score = 39 (18.8 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 344 SEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGV 401
++D + L D +LR ++++ + + + V S T SP D A + G
Sbjct: 266 AQDLQGSLQELKDRALRRYNLVRGQGPERL-VSGSDDFTLFMWSPAEDKKPLARM--TGH 322
Query: 402 YLWVNRCMFSGDSNIDSYAS 421
+N+ +FS DS I + AS
Sbjct: 323 QALINQVLFSPDSRIIASAS 342
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 125 (49.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 30/124 (24%), Positives = 69/124 (55%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ A+T++ FS G+ L A+ + + +WN K + ++ H + + S+ F +L
Sbjct: 18 KAAITSVDFSPSGKQL-ATASWDTFLMLWNC-KPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++WI D + F++ H+AP + F A+G+ + +A +D++ +++++
Sbjct: 76 ASASRDRTVRLWIPDKRG---KSSEFKA-HTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 122 IQDQ 125
+ +
Sbjct: 132 YRQR 135
Score = 125 (49.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H V V L+ SA +++W R S ++ + V+ V +G LA
Sbjct: 59 HKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLA 118
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
T ++D I+++++ R + HT + FS DG+ ++S D +++IWD +
Sbjct: 119 TASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 370 IDAIHVDVSITA-LSLSPNMDVLATAHVDQNGVYLW---VNRCM-----FSGDSNIDSY- 419
++ V + +PN +A+A D V +W VN+ + SG N S+
Sbjct: 179 VNNFSDSVGFANFVDFNPNGTCIASAGSDHT-VKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 420 ASGKEIVS 427
SG I++
Sbjct: 238 PSGNYIIT 245
Score = 124 (48.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 265 TLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFDVV 323
T + SAG +K+WD + L ++V V V +H + T + D +++ D++
Sbjct: 199 TCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLL 258
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
R++ +GHT + FS+ G+ S G D + +W
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 122 (48.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ VT++ FS G LLAS + + +W +KR S + AH + S+ F A+ L
Sbjct: 60 KDVVTSVQFSPLGN-LLASASRDRTVRLWIPDKRGKSSEFK-AHTAPVRSVDFSADGQFL 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 118 ATASEDKSIKVWNMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 122 IQDQ 125
Q
Sbjct: 174 TNKQ 177
Score = 73 (30.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS-GHSAPPLCIRFY 101
+ H AI S+ F + L +AS D + +W + P+ FR GH ++F
Sbjct: 15 KGHKAAITSVDFSPSGKQLATASWDTFLMLW-----NCKPQARAFRYVGHKDVVTSVQFS 69
Query: 102 ANGRHILSAGQDRAFRLFSVIQDQQSRELS-QRHVA 136
G + SA +DR RL+ I D++ + + H A
Sbjct: 70 PLGNLLASASRDRTVRLW--IPDKRGKSSEFKAHTA 103
Score = 53 (23.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
DP L R+ GH A + F +G+ + +A D L++
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWN 46
Score = 41 (19.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 284
H+G V V+ + +I+A G +K+ D +GR
Sbjct: 227 HSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGR 261
Score = 38 (18.4 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 16/75 (21%), Positives = 28/75 (37%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V + GN+ + ++ G ++ +L G R Y + H G V V+
Sbjct: 231 VNCVSFHPSGNYIITASSDGTLKILDLLEG--RLIY------TLQGHTGPVFTVSFSKGG 282
Query: 265 TLMISAGYHGDIKVW 279
L S G + +W
Sbjct: 283 ELFSSGGADTQVLLW 297
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 143 (55.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 44/152 (28%), Positives = 73/152 (48%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 615 FHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVL 674
Query: 361 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 418
+WD+ + + H D +I AL S + ++LA+ +D N V LW F D D
Sbjct: 675 LWDIGHGLMVGELKGHTD-TIYALRFSRDGEILASGSMD-NTVRLWDAVKAFE-DLETDD 731
Query: 419 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 450
+ + +++ S + G S+ P VH
Sbjct: 732 FTTATGHINLPENSQDLLLGTYMTKST-PVVH 762
Score = 109 (43.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 34/120 (28%), Positives = 52/120 (43%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +FS D LL S + G + +W+L+ V + H+ + F +
Sbjct: 524 GPVYGTSFSPDRNYLL-SCSEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQFSPYGYYFV 581
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S D ++W D P LR +GH A C RF+ N +I + DR RL+ V+
Sbjct: 582 SGGHDRVARLWATDHYQ--P--LRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVL 637
Score = 86 (35.3 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
EK + I H + F + L+S S D ++++W T L+ ++ GH+
Sbjct: 510 EKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTC---LVGYK-GHN 565
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 566 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 608
Score = 69 (29.3 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 23/110 (20%), Positives = 52/110 (47%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D ++ G + + +W++ ++L+SV + A D ++I +D+ ++
Sbjct: 459 TDDSSMIVGGFADSTVRVWSVTPKKLRSV-KAAADLSLID------------KESDDVLE 505
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ + T + ++L GHS P F + ++LS +D RL+S+
Sbjct: 506 RIMDEKTASELKILY---GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSL 552
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 153 (58.9 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 39/171 (22%), Positives = 86/171 (50%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW-EVGCSLVKI 299
+ +SE + +AH ++ ++ +++ +A Y K+W+ + +L++ L +
Sbjct: 480 IKVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDV 539
Query: 300 VYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSL 359
+ + + LLAT + D ++++ + +++ EGHT+ + F K L+S G DG +
Sbjct: 540 SFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLI 599
Query: 360 RIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRC 408
+IWD + + H + + ALS + D++ +A D +GV+ + C
Sbjct: 600 KIWDCSSGECLKTLDGHNN-RLWALSTMNDGDMIVSA--DADGVFQFWKDC 647
Score = 98 (39.6 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 34/111 (30%), Positives = 56/111 (50%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA----NEPVL--MSASADNSI 70
LLASG ++G++ +W+L KR+ ++E H +A+ L +EP L +S D+ I
Sbjct: 162 LLASGDTNGMVKVWDLVKRKCLHTLQE-HTSAVRGLDIIEVPDNDEPSLNLLSGGRDDII 220
Query: 71 KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG---RHILSAGQDRAFRL 118
+W F+ +LL+ + C F +G R I +AG D F+L
Sbjct: 221 NLWDFNMKK-KCKLLKTLPVNQQVESC-GFLKDGDGKRIIYTAGGDAIFQL 269
Score = 79 (32.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 24/114 (21%), Positives = 50/114 (43%)
Query: 260 CDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK--IVYHRVNGLLATVADDLVI 317
C L S+G +K+W + E + V+ ++ L++ AD L I
Sbjct: 542 CQYDKLLATSSG-DKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGL-I 599
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID 371
+++D + ++ +GH +R+ DG ++S+ DG + W ++I+
Sbjct: 600 KIWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKDCTEQEIE 653
Score = 46 (21.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 41 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
I E H++ + SL + + +AS DN+ +W ++ + GHSA
Sbjct: 383 IYEGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSA 435
Score = 44 (20.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 24/111 (21%), Positives = 48/111 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+TAL + DGQ L + + ++ I++L+ ++ ++ + + I+ + +L
Sbjct: 64 ITALKLTPDGQ-YLTYVSQAQLLKIFHLKTGKVVRSMKISSPSYILDAD--STSTLLAVG 120
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA--NGRHILSAGQD 113
D SI + D +G + GH ++FY N + L A D
Sbjct: 121 GTDGSII--VVDIENG--YITHSFKGHGGTISSLKFYGQLNSKIWLLASGD 167
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G+ T + F+S G + +SGA + I IW++ +L + H+ + F + L+
Sbjct: 187 GSATFVDFNSSGTCIASSGADN-TIKIWDIRTNKLIQHYK-VHNAGVNCFSFHPSGNYLI 244
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S S+D++IK I D +G RL+ GH P L + F +G S G D ++
Sbjct: 245 SGSSDSTIK--ILDLLEG--RLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTN 300
Query: 123 QDQQS-RELSQRHVAKR 138
D + REL +H +KR
Sbjct: 301 FDSLNYRELLSKH-SKR 316
Score = 129 (50.5 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 35/121 (28%), Positives = 60/121 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+T + F+ G L+AS + + +W + +S + +AH ++ S+HF + L++A
Sbjct: 63 ITGVNFAPSGS-LVASSSRDQTVRLWTPSIKG-ESTVFKAHTASVRSVHFSRDGQRLVTA 120
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+K+W + + L + H+ C RF +GR I S G DR RL+
Sbjct: 121 SDDKSVKVWGVERK----KFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSH 176
Query: 125 Q 125
Q
Sbjct: 177 Q 177
Score = 117 (46.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 29/141 (20%), Positives = 67/141 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRW-EVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
L+ S G +++WD + + + G S + ++ +A+ D I+++D+
Sbjct: 158 LIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRT 217
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
++++ ++ H + F F G +L+S D +++I D++ R I +H + ++
Sbjct: 218 NKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVT 277
Query: 384 LSPNMDVLATAHVDQNGVYLW 404
S + D+ A+ D V +W
Sbjct: 278 FSRDGDLFASGGADSQ-VLMW 297
Score = 117 (46.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 34/150 (22%), Positives = 63/150 (42%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V +++A +KVW + + + V+ +G L+
Sbjct: 100 AHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLI 159
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ DD +RL+D + + + F + T F+ G + SSG D +++IWD+ +
Sbjct: 160 ASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNK 219
Query: 369 QIDAIHV-DVSITALSLSPNMDVLATAHVD 397
I V + + S P+ + L + D
Sbjct: 220 LIQHYKVHNAGVNCFSFHPSGNYLISGSSD 249
Score = 99 (39.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 24/105 (22%), Positives = 55/105 (52%)
Query: 18 LASGASSGVISIWNLE-KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
LA+G+ + IWNL K R + H + I ++F + ++ S+S D ++++W
Sbjct: 33 LATGSCDKSLMIWNLAPKARAFRFV--GHTDVITGVNFAPSGSLVASSSRDQTVRLWT-P 89
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ G+ + + H+A + F +G+ +++A D++ +++ V
Sbjct: 90 SIKGESTVFK---AHTASVRSVHFSRDGQRLVTASDDKSVKVWGV 131
Score = 66 (28.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H + I F N L + S D S+ +W R RF GH+ + F
Sbjct: 15 KGHKDVISCADFNPNNKQLATGSCDKSLMIW---NLAPKARAFRF-VGHTDVITGVNFAP 70
Query: 103 NGRHILSAGQDRAFRLFS 120
+G + S+ +D+ RL++
Sbjct: 71 SGSLVASSSRDQTVRLWT 88
Score = 48 (22.0 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
DP L R GH C F N + + + D++ ++++
Sbjct: 7 DPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNL 47
Score = 45 (20.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 214 GNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYH 273
GN+ + G++ I+ +L G R Y + + H G V+ V L S G
Sbjct: 240 GNYLISGSSDSTIKILDLLEG--RLIY------TLHGHKGPVLTVTFSRDGDLFASGGAD 291
Query: 274 GDIKVW 279
+ +W
Sbjct: 292 SQVLMW 297
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 170 (64.9 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 53/184 (28%), Positives = 88/184 (47%)
Query: 262 STNTLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIR 318
S +L ++G H ++W F R R G + + +H + LAT + D +R
Sbjct: 393 SPYSLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVD 376
L+ VR F GH + FS +GK+L S+G D L++WD+ + H D
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTD 511
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSV 436
+IT+L+ SP+ ++A+A +D N V +W R + + + S E+V V +S+V
Sbjct: 512 -NITSLTFSPDSSLIASASMD-NSVRVWDIR---NTHCSAPTDGSSSELVGVYTGQMSNV 566
Query: 437 EGCQ 440
Q
Sbjct: 567 LSVQ 570
Score = 120 (47.3 bits), Expect = 0.00090, P = 0.00090
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RG V +LAFS +G+ LAS + +W+L L +R DN I SL F + ++
Sbjct: 468 RGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLFKELRGHTDN-ITSLTFSPDSSLI 525
Query: 62 MSASADNSIKMW-IFDT-----TDGDP-RLLRFRSGHSAPPLCIRFYA 102
SAS DNS+++W I +T TDG L+ +G + L ++F A
Sbjct: 526 ASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSVQFMA 573
Score = 75 (31.5 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 25/105 (23%), Positives = 46/105 (43%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
LLA+G + I +W+L ++L+ E H + +H + ++ D D
Sbjct: 282 LLAAGFDNSCIKLWSLRSKKLKP---EPHRVDVSRIHLACD---ILEEEDDED------D 329
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ ++LR GH P RF A+ +LS +D + R + +
Sbjct: 330 DVGTEMKVLR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
Score = 67 (28.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 99
V+R H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 337 VLR-GHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDVD 391
Query: 100 FYANGRHILSAGQDRAFRLFS 120
+ S DR RL+S
Sbjct: 392 ISPYSLYFASGSHDRTARLWS 412
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 125 (49.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 308
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 371 HQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 429
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 120 (47.3 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF---FANEPV- 60
V ++++S DG+ L ASG +G I +W+ + H I +L + AN
Sbjct: 159 VLSISWSPDGKKL-ASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECR 217
Query: 61 -LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ S+S D S+++W DTT G R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 218 YVASSSKDGSVRVW--DTTAG--RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 93 (37.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 39/168 (23%), Positives = 78/168 (46%)
Query: 237 RGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLK--SRWEVGC 294
RGS ++ ER+ +N V G + ++S + +W D K +R
Sbjct: 319 RGSLQELKERALSRYN-LVRGRGLER----LVSGSDDFTLFLWS-PAEDKKPLARMTGHQ 372
Query: 295 SLV-KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
+L+ ++++ + ++A+ + D I+L+D + + GH + +S D + L+S
Sbjct: 373 ALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSG 432
Query: 354 GMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 398
D +L++WDV LA + H D + A+ SP+ +A+ D+
Sbjct: 433 SSDSTLKVWDVKAQKLAADLPG-HAD-EVYAVDWSPDGQRVASGGKDK 478
Score = 82 (33.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++AFS G+ LASG+ + W+L + H + ++S+ + + L S
Sbjct: 116 AVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPHFTC-QGHRHWVLSISWSPDGKKLAS 173
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF---YANG--RHILSAGQDRAFRL 118
+ I +W D + G ++ R +GHS + + +AN R++ S+ +D + R+
Sbjct: 174 GCKNGQILLW--DPSTGK-QVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRV 230
Query: 119 FSVIQDQQSRELS 131
+ + R L+
Sbjct: 231 WDTTAGRCERILT 243
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+AS + G + +W+ R + ++ H ++ L + + +L SAS D +IK+W
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILT-GHTQSVTCLRW-GGDGLLYSASQDRTIKVW--RA 274
Query: 78 TDGDPRLLRFRSGH 91
DG L R GH
Sbjct: 275 HDGV--LCRTLQGH 286
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--QGHRHWVLSISWSP 166
Query: 103 NGRHILS 109
+G+ + S
Sbjct: 167 DGKKLAS 173
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GHS + + F G+++ S D R + +
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 142 (55.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 43/152 (28%), Positives = 73/152 (48%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
YH + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 636 YHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 361 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 418
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 696 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAVKAFE-DLETDD 752
Query: 419 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 450
+ + +++ S + G S+ P VH
Sbjct: 753 FTTATGHINLPENSQELLLGTYMTKST-PVVH 783
Score = 107 (42.7 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 32/120 (26%), Positives = 53/120 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +FS D LL+S + G + +W+L+ V + H+ + F +
Sbjct: 545 GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQFSPYGYYFV 602
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S D ++W D P LR +GH A C R++ N ++ + DR RL+ V+
Sbjct: 603 SGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVL 658
Score = 87 (35.7 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 531 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 586
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 629
Score = 80 (33.2 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 480 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLID------------KESDDVLE 526
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 527 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 125 (49.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 308
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 371 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 429
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 119 (46.9 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF---FANEPV- 60
V ++++S DG+ L ASG +G I +W+ + H I L + AN
Sbjct: 159 VLSISWSPDGRKL-ASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECR 217
Query: 61 -LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ S+S D S+++W DTT G R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 218 YVASSSKDGSVRIW--DTTAG--RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 91 (37.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 25/104 (24%), Positives = 52/104 (50%)
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++++ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436
Query: 358 SLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 398
+L++WDV LA + H D + A+ SP+ +A+ D+
Sbjct: 437 TLKVWDVKAQKLAMDLPG-HAD-EVYAVDWSPDGQRVASGGKDK 478
Score = 79 (32.9 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++AFS G+ LASG+ + W+L + H + ++S+ + + L S
Sbjct: 116 AVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPHFTCK-GHRHWVLSISWSPDGRKLAS 173
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF---YANG--RHILSAGQDRAFRL 118
+ I +W D + G ++ R +GHS + + +AN R++ S+ +D + R+
Sbjct: 174 GCKNGQILLW--DPSTGK-QVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRI 230
Query: 119 FSVIQDQQSRELS 131
+ + R L+
Sbjct: 231 WDTTAGRCERILT 243
Score = 76 (31.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+AS + G + IW+ R + ++ H ++ L + + +L SAS D +IK+W
Sbjct: 219 VASSSKDGSVRIWDTTAGRCERILT-GHTQSVTCLRW-GGDGLLYSASQDRTIKVW--RA 274
Query: 78 TDGDPRLLRFRSGH 91
DG L R GH
Sbjct: 275 HDGV--LCRTLQGH 286
Score = 70 (29.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 308 LATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
L + +DD + L+ + + + GH I FS D + + S+ D S+++WD
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + ++ HV ++ ++ S + +L + D + +W
Sbjct: 404 GKYLASLRGHV-AAVYQIAWSADSRLLVSGSSDST-LKVW 441
Score = 68 (29.0 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--KGHRHWVLSISWSP 166
Query: 103 NGRHILS 109
+GR + S
Sbjct: 167 DGRKLAS 173
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GHS + + F G+++ S D R + +
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 138 (53.6 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 41/166 (24%), Positives = 83/166 (50%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 308
AH+ + V + +L++SA + G K+WD K G LK+ + V NG
Sbjct: 168 AHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKF 227
Query: 309 ATVAD-DLVIRLFDVVALRMVRKFEGHTDRITDFC----FS-EDGKWLLSSGMDGSLRIW 362
VA D ++L + + ++ + GHT+++ FC FS +GK+++S D + +W
Sbjct: 228 ILVATLDSTLKLSNYATGKFLKVYTGHTNKV--FCITSAFSVTNGKYIVSGSEDNCVYLW 285
Query: 363 DVILARQIDAI--HVDVSITALSLSPNMDVLATA--HVDQNGVYLW 404
D+ + + H D ++ ++S P + ++++ H+D+ + +W
Sbjct: 286 DLQARNILQRLEGHTD-AVISVSCHPVQNEISSSGNHLDKT-IRIW 329
Score = 99 (39.9 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 33/120 (27%), Positives = 56/120 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLHFFANEPVLM 62
A++ + FS+DG LLAS + + +W+ L + R E H + I L + ++
Sbjct: 45 AISCVKFSNDGN-LLASASVDKTMILWSATNYSL--IHRYEGHSSGISDLAWSSDSHYTC 101
Query: 63 SASADNSIKMWIFDTTDGDP-RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++W D P L+ GH+ C+ F I+S D R++ V
Sbjct: 102 SASDDCTLRIW--DARS--PYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Score = 67 (28.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/115 (22%), Positives = 53/115 (46%)
Query: 20 SGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTD 79
+ +SG + I+ R L+++ E H AI + F + +L SAS D ++ +W T+
Sbjct: 20 NAGTSGNVPIYK-PYRHLKTL--EGHTAAISCVKFSNDGNLLASASVDKTMILW--SATN 74
Query: 80 GDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 134
L+ GHS+ + + ++ + SA D R++ + ++ + H
Sbjct: 75 YS--LIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGH 127
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 138 (53.6 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 633 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 692
Query: 361 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 418
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 693 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAIKAFE-DLETDD 749
Query: 419 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 450
+ + +++ S + G S+ P VH
Sbjct: 750 FTTATGHINLPENSQELLLGTYMTKST-PVVH 780
Score = 110 (43.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +FS D LL+S + G + +W+L+ V + H+ + F +
Sbjct: 542 GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQFSPYGYYFV 599
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S D ++W D P LR +GH A C RF+ N ++ + DR RL+ V+
Sbjct: 600 SGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVL 655
Score = 87 (35.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 528 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 583
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 584 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 626
Score = 80 (33.2 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 477 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLID------------KESDDVLE 523
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 524 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 570
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 138 (53.6 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 361 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 418
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 695 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAIKAFE-DLETDD 751
Query: 419 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 450
+ + +++ S + G S+ P VH
Sbjct: 752 FTTATGHINLPENSQELLLGTYMTKST-PVVH 782
Score = 110 (43.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +FS D LL+S + G + +W+L+ V + H+ + F +
Sbjct: 544 GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQFSPYGYYFV 601
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S D ++W D P LR +GH A C RF+ N ++ + DR RL+ V+
Sbjct: 602 SGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVL 657
Score = 87 (35.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 530 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 585
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 628
Score = 80 (33.2 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 479 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLID------------KESDDVLE 525
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 526 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 138 (53.6 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 361 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 418
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 695 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAVKAFE-DVETDD 751
Query: 419 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 450
+ + +++ S + G S+ P VH
Sbjct: 752 FTTATGHINLPENSQELLLGTYMTKST-PVVH 782
Score = 110 (43.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +FS D LL+S + G + +W+L+ V + H+ + F +
Sbjct: 544 GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQFSPYGYYFV 601
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S D ++W D P LR +GH A C RF+ N ++ + DR RL+ V+
Sbjct: 602 SGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVL 657
Score = 87 (35.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 530 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 585
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 628
Score = 79 (32.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 479 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLID------------KESDDVLE 525
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 526 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 138 (53.6 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 636 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 361 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 418
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 696 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAVKAFE-DLETDD 752
Query: 419 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 450
+ + +++ S + G S+ P VH
Sbjct: 753 FTTATGHINLPENSQELLLGTYMTKST-PVVH 783
Score = 110 (43.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +FS D LL+S + G + +W+L+ V + H+ + F +
Sbjct: 545 GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQFSPYGYYFV 602
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S D ++W D P LR +GH A C RF+ N ++ + DR RL+ V+
Sbjct: 603 SGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVL 658
Score = 87 (35.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 531 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 586
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 629
Score = 79 (32.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 480 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLID------------KESDDVLE 526
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 527 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/209 (23%), Positives = 96/209 (45%)
Query: 254 EVVGVACDSTNTLMISAGYH-GDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATV 311
EV V C S + ++++GY G I++W L++ + S+ + ++R+ +L +
Sbjct: 61 EVTNV-CLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSG 119
Query: 312 ADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID 371
+ D + ++D++ + + GH D+IT E L++S DG ++IWD I
Sbjct: 120 SKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQ 179
Query: 372 AI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW---VNRCMFSGDSNID-SYASGKEI 425
I H + I + ++P+ L + D N + W N S I+ + I
Sbjct: 180 TIVGHRN-PIWGIDVNPDETRLCSCTSD-NQIRFWRIPSNERQREDGSGIEPKFIVNTPI 237
Query: 426 VS-VKMPSVSSVEGCQDENSSQPDVHRTD 453
S V +P + +G + ENS+ + + D
Sbjct: 238 NSAVIIPDEINEDGSKKENSNNSNNNDID 266
Score = 133 (51.9 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
++ VT + S DG LLASG S G I IW++ +LQ+V H ++ ++ F +
Sbjct: 58 IKAEVTNVCLSKDGA-LLASGYSDGSIRIWSMSDYQLQAVFN-GHRGSVTTMTFNRLGNI 115
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L+S S D + +W T G L R R GH ++ H++++ +D F
Sbjct: 116 LVSGSKDTEVIVWDIITESG---LFRLR-GHRDQITSVKLLERSNHLITSSKDG----FI 167
Query: 121 VIQDQQSRELSQRHVAKR 138
I D +++ Q V R
Sbjct: 168 KIWDTETQHCIQTIVGHR 185
Score = 116 (45.9 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 40/190 (21%), Positives = 80/190 (42%)
Query: 215 NFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYA-HNGEVVGVACDSTNTLMISAGYH 273
N V+ AG +E + ++ G ++S + A H ++ ++ S + +++S
Sbjct: 358 NKFVITLAGNSLEAYEIKEKEQGGGAFEVSSTLDQAGHRSDIRSLSLSSNDQMLVSTSSE 417
Query: 274 GDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL-VIRLFDVVALRMVRKFE 332
+KVW+ K L + C L V I +F++ + V +
Sbjct: 418 S-VKVWNMKS--LSCIRSIACDYGLCTVFAPGNLHVIVGTKTGTIEVFELASAARVASIK 474
Query: 333 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV-ILARQIDAIH--VDVSITALSLSPNMD 389
H + + D + + S G D ++ WD ++A Q ++ H +++S+T +L D
Sbjct: 475 AHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIASQENSKHKVLNLSLTK-TLKVESD 533
Query: 390 VLATAHVDQN 399
VLA + N
Sbjct: 534 VLALKYSADN 543
Score = 102 (41.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 61/253 (24%), Positives = 97/253 (38%)
Query: 208 CTISACGNFAVL-GTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTL 266
CT+ A GN V+ GT G IE F L S S AH G V +
Sbjct: 440 CTVFAPGNLHVIVGTKTGTIEVFELASAARVASIK--------AHEGSVWSLVLTPDLRG 491
Query: 267 MISAGYHGDIKVWDFK--GRDLKSRWEV-GCSLVKIV----------YHRVNGLLATVAD 313
+ S G +K WDF+ S+ +V SL K + Y N LA
Sbjct: 492 VTSGGADKLVKFWDFELIASQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLL 551
Query: 314 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 373
D +++F ++ GH + S+D +++ D +++IW + +
Sbjct: 552 DNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSF 611
Query: 374 HV-DVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPS 432
D SI +S P+ +A D+ Y W + F I+++ E+ S+ M S
Sbjct: 612 FAHDDSIMQVSFIPSTHHFISASKDKRIKY-W-DADKFEHIQTIEAHHG--EVWSLAMGS 667
Query: 433 VSS--VEGCQDEN 443
V + G D +
Sbjct: 668 VGDFFISGSHDRS 680
Score = 91 (37.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/128 (23%), Positives = 56/128 (43%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RG+VT + F+ G +L SG+ + +W++ +R H + I S+ L
Sbjct: 101 RGSVTTMTFNRLGN-ILVSGSKDTEVIVWDIITESGLFRLR-GHRDQITSVKLLERSNHL 158
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+++S D IK+W +T ++ GH P I + + S D R + +
Sbjct: 159 ITSSKDGFIKIWDTETQ----HCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRI 214
Query: 122 IQDQQSRE 129
+++ RE
Sbjct: 215 PSNERQRE 222
Score = 82 (33.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 25/118 (21%), Positives = 50/118 (42%)
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL-KSRWEVGCSLVKIVYHRVN 305
S Y H V+ + +TL+I+ +IK+W D KS + S++++ +
Sbjct: 568 SLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPST 627
Query: 306 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ + D I+ +D ++ E H + G + +S D S+RI++
Sbjct: 628 HHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 82 (33.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 13 DGQPLLASGASSGVISIWNLEKRRL-QSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
DG LA ISIW+L K+ L QS+ E + ++ + +L S +D SI+
Sbjct: 25 DGSGKLAITGCGERISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIR 84
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
+W D +L +GH + F G ++S +D ++ +I +
Sbjct: 85 IWSMS----DYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITE 133
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 123 (48.4 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 34/146 (23%), Positives = 68/146 (46%)
Query: 263 TNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 321
T T +I G ++ +D + GR++ + + I + N +LA D +RL D
Sbjct: 155 TKTEIIGGSVDGTVRTFDMRIGREMSDNLGQPVNCISIS-NDGNCVLAGCLDS-TLRLLD 212
Query: 322 VVALRMVRKFEGHTDRI--TDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DVS 378
+++ ++GH + TD C + ++ DG + WD++ A+ + D+
Sbjct: 213 RTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLV 272
Query: 379 ITALSLSPNMDVLATAHVDQNGVYLW 404
+T++S P D + T+ VD + +W
Sbjct: 273 VTSVSYHPKEDCMLTSSVDGT-IRVW 297
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H G V+ + ++ G I++W+ +G +K+ G + + N
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFC 76
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ D + +DV R++RKF GH + F++ ++S+G D SLR+WD
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 111 (44.1 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
GAV A F+ DG L G I +WN + L + +H + +H ++
Sbjct: 19 GAVLAARFNGDGNYALTCGKDR-TIRLWNPHRGILIKTYK-SHGREVRDVHVTSDNAKFC 76
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S D + W D + G R++R GH ++F + ++SAG DR+ R++
Sbjct: 77 SCGGDRQVYYW--DVSTG--RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVW 129
Score = 103 (41.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 34/145 (23%), Positives = 68/145 (46%)
Query: 220 GTAGGWIERFNLQSGISRGSYLDMSERS-NYAHNGEVVGVAC-DSTNTLMISAGYHGDIK 277
G+ G + F+++ G L + +++G V C DST L+ G++
Sbjct: 162 GSVDGTVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTT--GEL- 218
Query: 278 VWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDR 337
+ +KG KS ++ C L H + G ++D ++ +D+V +++ KF H
Sbjct: 219 LQVYKGHISKS-FKTDCCLTNSDAHVIGG-----SEDGLVFFWDLVDAKVLSKFRAHDLV 272
Query: 338 ITDFCFSEDGKWLLSSGMDGSLRIW 362
+T + +L+S +DG++R+W
Sbjct: 273 VTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 103 (41.3 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 35/160 (21%), Positives = 71/160 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSL---VKIVYHRVNGL 307
H+GEV V + ++++++SAG+ ++VWD + ++ + L + +V + +
Sbjct: 101 HDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEII 160
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDR-ITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
+V D +R FD +R+ R+ + + + S DG +L+ +D +LR+ D
Sbjct: 161 GGSV--DGTVRTFD---MRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTT 215
Query: 367 AR--QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
Q+ H+ S N D + V+ W
Sbjct: 216 GELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFW 255
Score = 65 (27.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
GH L RF +G + L+ G+DR RL++
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
Score = 48 (22.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 41 IREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
I + H+ A+++ F + ++ D +I++W
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLW 45
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 123 (48.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 308
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 372 HQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 430
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 431 VSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 118 (46.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF---FANEPV- 60
V ++++S DG+ L ASG +G I +W+ + H I +L + AN
Sbjct: 160 VLSISWSPDGKKL-ASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECR 218
Query: 61 -LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ S+S D S+++W DTT G R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 219 YVASSSKDGSVRVW--DTTAG--RCERTLTGHAQSVTCLRWGGDGL-LYSASQDRTIKVW 273
Score = 92 (37.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 24/103 (23%), Positives = 51/103 (49%)
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++V+ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 378 QVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 437
Query: 358 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQ 398
+L++WDV + + H D + A+ SP+ +A+ D+
Sbjct: 438 TLKVWDVKAQKLSTDLPGHAD-EVYAVDWSPDGQRVASGGKDK 479
Score = 84 (34.6 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++AFS G+ LASG+ + W+L + H + ++S+ + + L S
Sbjct: 117 AVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPHFTC-QGHRHWVLSISWSPDGKKLAS 174
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF---YANG--RHILSAGQDRAFRL 118
+ I +W D + G ++ R +GHS + + +AN R++ S+ +D + R+
Sbjct: 175 GCKNGQILLW--DPSTGK-QVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRV 231
Query: 119 FSVIQDQQSRELS 131
+ + R L+
Sbjct: 232 WDTTAGRCERTLT 244
Score = 73 (30.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 27/132 (20%), Positives = 58/132 (43%)
Query: 276 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA-LRMVRKFEGH 334
+ D +G L+ E S +V + L + +DD + L+ + + + GH
Sbjct: 314 VNAQDLRG-SLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 372
Query: 335 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLA 392
I FS D + + S+ D S+++WD + + ++ HV ++ ++ S + +L
Sbjct: 373 QALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHV-AAVYQIAWSADSRLLV 431
Query: 393 TAHVDQNGVYLW 404
+ D + +W
Sbjct: 432 SGSSDST-LKVW 442
Score = 71 (30.1 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+AS + G + +W+ R + + H ++ L + + +L SAS D +IK+W
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLT-GHAQSVTCLRW-GGDGLLYSASQDRTIKVW--RA 275
Query: 78 TDGDPRLLRFRSGH 91
DG L R GH
Sbjct: 276 HDGV--LCRTLQGH 287
Score = 65 (27.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 112 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--QGHRHWVLSISWSP 167
Query: 103 NGRHILS 109
+G+ + S
Sbjct: 168 DGKKLAS 174
Score = 44 (20.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GHS + + F G+++ S D R + +
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 144
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 182 (69.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V + +S+ +++ G +++WD + + L++ S+ + +H + LA
Sbjct: 62 HTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+DV V +++GHT + FS DGKWL S+ D ++++WD+I +
Sbjct: 122 SGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKM 181
Query: 370 IDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
I S + + PN +LA+ D+ V LW
Sbjct: 182 ITEFTSHTSAVNVVQFHPNEYLLASGSADRT-VKLW 216
Score = 140 (54.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 56/218 (25%), Positives = 94/218 (43%)
Query: 249 YAHNGEVVGVAC---DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRV 304
+ + G V C + SA +K+WD + + + S V +V +H
Sbjct: 141 FRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPN 200
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
LLA+ + D ++L+D+ M+ EG T + F+ DG L S G + +LR++
Sbjct: 201 EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYS-GSENTLRVYGW 259
Query: 365 ILARQIDAIHVDVS-ITALSLSPN-MDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASG 422
R D +HV ++ L++S N M ++ +H + + + +NR SG S I
Sbjct: 260 EPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKKSG-SVIQGLIQD 318
Query: 423 KEIVSVKMPSVSSVEGCQ-DENSSQPDVHRTDRVPKDS 459
K I P+ SS G N +P T + K S
Sbjct: 319 KPI-----PAPSSALGTTLRRNYERPTTSCTGQEMKQS 351
Score = 130 (50.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV + F+S + ++A G+ SG + +W+LE ++ + H +I SL F L S
Sbjct: 65 AVGCIQFNSSEERVVA-GSLSGSLRLWDLEAAKILRTLM-GHKASISSLDFHPMGEYLAS 122
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
S D++IK+W D + R++ GH+ C+ F +G+ + SA D +L+ +I
Sbjct: 123 GSVDSNIKLW--DVRRKGC-VFRYK-GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIA 178
Query: 124 DQQSRELS 131
+ E +
Sbjct: 179 GKMITEFT 186
Score = 121 (47.7 bits), Expect = 0.00088, P = 0.00088
Identities = 35/118 (29%), Positives = 61/118 (51%)
Query: 299 IVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
+V + +G LLAT +D + ++ V + GHT + F+ + +++ + G
Sbjct: 26 LVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSG 85
Query: 358 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW-VNR--CMF 410
SLR+WD+ A+ + + H SI++L P + LA+ VD N + LW V R C+F
Sbjct: 86 SLRLWDLEAAKILRTLMGH-KASISSLDFHPMGEYLASGSVDSN-IKLWDVRRKGCVF 141
Score = 104 (41.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISLHFFANEPVLMS 63
V++L LLA+G ++IW + K + S+ H +A+ + F ++E +++
Sbjct: 23 VSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT--GHTSAVGCIQFNSSEERVVA 80
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S+++W + ++LR GH A + F+ G ++ S D +L+ V
Sbjct: 81 GSLSGSLRLWDLEAA----KILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV 134
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 125 (49.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 308
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 373 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 431
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 432 VSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 114 (45.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL-----HFFANEP 59
V ++++S DG+ L ASG +G I +W+ H I L H
Sbjct: 161 VLSISWSPDGKKL-ASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECR 219
Query: 60 VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ S+S D S+++W DTT G R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 220 YVASSSKDGSVRVW--DTTAG--RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 274
Score = 90 (36.7 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 23/103 (22%), Positives = 51/103 (49%)
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++++ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 379 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 438
Query: 358 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQ 398
+L++WDV + + H D + A+ SP+ +A+ D+
Sbjct: 439 TLKVWDVKAQKLTTDLPGHAD-EVYAVDWSPDGQRVASGGKDK 480
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+AS + G + +W+ R + ++ H ++ L + + +L SAS D +IK+W
Sbjct: 221 VASSSKDGSVRVWDTTAGRCERILT-GHTQSVTCLRW-GGDGLLYSASQDRTIKVW--RA 276
Query: 78 TDGDPRLLRFRSGH 91
DG L R GH
Sbjct: 277 HDGV--LCRTLQGH 288
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++AFS G+ LASG+ + W+L + H + ++S+ + + L S
Sbjct: 118 AVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPHFTCK-GHRHWVLSISWSPDGKKLAS 175
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
+ I +W D + G ++ R +GHS
Sbjct: 176 GCKNGQILLW--DPSTGT-QVGRTLTGHS 201
Score = 75 (31.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 28/132 (21%), Positives = 58/132 (43%)
Query: 276 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA-LRMVRKFEGH 334
+ D +G LK E S +V + L + +DD + L+ + + + GH
Sbjct: 315 VNAQDLQG-SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 373
Query: 335 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLA 392
I FS D + + S+ D S+++WD + + ++ HV ++ ++ S + +L
Sbjct: 374 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV-AAVYQIAWSADSRLLV 432
Query: 393 TAHVDQNGVYLW 404
+ D + +W
Sbjct: 433 SGSSDST-LKVW 443
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 113 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--KGHRHWVLSISWSP 168
Query: 103 NGRHILS 109
+G+ + S
Sbjct: 169 DGKKLAS 175
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GHS + + F G+++ S D R + +
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 145
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 168 (64.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 53/165 (32%), Positives = 83/165 (50%)
Query: 269 SAGYHGDIKVWDFKGRDLKSRWEVGCSL-VKIV-YHRVNGLLATVADDLVIRLFDVVALR 326
SA + ++W F R R G L V V +H + LAT + D +RL+
Sbjct: 401 SASHDRTARLWSFD-RTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 459
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHVDVSITALS 383
VR F GH + FS +GK+L S+G D L++WD+ L +++ H D +IT+L+
Sbjct: 460 SVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HTD-NITSLT 517
Query: 384 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 428
SP+ ++A+A +D N V +W R + N + S E+V V
Sbjct: 518 FSPDSSLIASASMD-NSVRVWDIRNTYC---NAPADGSSSELVGV 558
Score = 117 (46.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + F SD LL+ I W+L + +V+ + H + L
Sbjct: 343 GPVYSTRFLSDSSGLLSCSEDMS-IRYWDL-RSFTNTVLYQGHAYPVWDLDISPCSLYFA 400
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
SAS D + ++W FD T P LR +GH C++F+ N ++ + D+ RL+S
Sbjct: 401 SASHDRTARLWSFDRTY--P--LRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQ 456
Query: 123 QDQQSR 128
Q R
Sbjct: 457 QGNSVR 462
Score = 69 (29.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 24/110 (21%), Positives = 49/110 (44%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
S LLA+G + + +W+L ++L+S E H + + + +L ++
Sbjct: 277 SPNSKLLAAGFDNSCVKLWSLRSKKLKS---EPHLVDVSRIRLACD--ILDEEEEED--- 328
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
D+ + ++LR GH P RF ++ +LS +D + R + +
Sbjct: 329 ----DSAGTEMKILR---GHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDL 371
Score = 64 (27.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 309
H G V+ +A + SAG +K+WD L ++ + + + L+A
Sbjct: 467 HRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA 526
Query: 310 TVADDLVIRLFDV 322
+ + D +R++D+
Sbjct: 527 SASMDNSVRVWDI 539
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 125 (49.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 308
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 371 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 429
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 430 VSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 112 (44.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL-----HFFANEP 59
V ++++S DG+ L ASG +G + +W+ H I L H
Sbjct: 159 VLSISWSPDGKKL-ASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECR 217
Query: 60 VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ S+S D S+++W DTT G R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 218 YVASSSKDGSVRVW--DTTAG--RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 91 (37.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 25/104 (24%), Positives = 52/104 (50%)
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++++ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436
Query: 358 SLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 398
+L++WDV LA + H D + A+ SP+ +A+ D+
Sbjct: 437 TLKVWDVKAQKLATDLPG-HAD-EVYAVDWSPDGQRVASGGKDK 478
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+AS + G + +W+ R + ++ H ++ L + + +L SAS D +IK+W
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILT-GHTQSVTCLRW-GGDGLLYSASQDRTIKVW--RA 274
Query: 78 TDGDPRLLRFRSGH 91
DG L R GH
Sbjct: 275 HDGV--LCRTLQGH 286
Score = 75 (31.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 28/132 (21%), Positives = 58/132 (43%)
Query: 276 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA-LRMVRKFEGH 334
+ D +G LK E S +V + L + +DD + L+ + + + GH
Sbjct: 313 VNAQDLQG-SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 371
Query: 335 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLA 392
I FS D + + S+ D S+++WD + + ++ HV ++ ++ S + +L
Sbjct: 372 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV-AAVYQIAWSADSRLLV 430
Query: 393 TAHVDQNGVYLW 404
+ D + +W
Sbjct: 431 SGSSDST-LKVW 441
Score = 72 (30.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 23/89 (25%), Positives = 43/89 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++AFS G+ LASG+ + W+L + H + ++S+ + + L S
Sbjct: 116 AVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPHFTCK-GHRHWVLSISWSPDGKKLAS 173
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
+ + +W D + G ++ R +GHS
Sbjct: 174 GCKNGQVLLW--DPSTG-LQVGRTLTGHS 199
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--KGHRHWVLSISWSP 166
Query: 103 NGRHILS 109
+G+ + S
Sbjct: 167 DGKKLAS 173
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GHS + + F G+++ S D R + +
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 143 (55.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 40/125 (32%), Positives = 66/125 (52%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+H + +AT + D +RL+DV+ VR F GH I FS +GK+L S DG +
Sbjct: 591 FHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVL 650
Query: 361 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW-VNRCMFSGDSNID 417
+WD+ I + H +I AL S + +++A+ +D N V LW V R + +++
Sbjct: 651 LWDIGHGLMIAELKGHTG-TIYALKFSRDGEIIASGSID-NTVRLWDVMRAIDDVETDDF 708
Query: 418 SYASG 422
+ A+G
Sbjct: 709 TAATG 713
Score = 115 (45.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 34/120 (28%), Positives = 54/120 (45%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V ++FS D LL+S + G I +W+L+ V + H+ + F +
Sbjct: 500 GPVYGVSFSPDRNYLLSS-SEDGTIRLWSLQTFTCL-VGYKGHNYPVWDTQFSPFGYYFV 557
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S D ++W D P LR +GH A C RF+ N ++ + DR RL+ V+
Sbjct: 558 SGGHDRVARLWATDHYQ--P--LRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVL 613
Score = 99 (39.9 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 362
N LL++ ++D IRL+ + + ++GH + D FS G + +S G D R+W
Sbjct: 512 NYLLSS-SEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWAT 570
Query: 363 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW--VN-RCM--FSGDSN-I 416
D +I A H+ +T PN + +AT D+ V LW +N C+ F+G I
Sbjct: 571 DHYQPLRIFAGHL-ADVTCTRFHPNSNYVATGSSDRT-VRLWDVLNGNCVRIFTGHKGPI 628
Query: 417 DSYA---SGKEIVS 427
S A +GK + S
Sbjct: 629 HSLAFSPNGKFLAS 642
Score = 97 (39.2 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
EK +S I H + + F + L+S+S D +I++W T L+ ++ GH+
Sbjct: 486 EKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTC---LVGYK-GHN 541
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 542 YPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 584
Score = 91 (37.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 28/117 (23%), Positives = 59/117 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+TA+ F+ D L+A G + + +W++ ++L+ V + A D N L+
Sbjct: 429 LTAVDFTDDSS-LIAGGFADSTVRVWSVTPKKLRKV-KSAAD---------LN---LIDK 474
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+D+ ++ + + T + ++L GHS P + F + ++LS+ +D RL+S+
Sbjct: 475 ESDDVLERIMDEKTSSESKILH---GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSL 528
Score = 57 (25.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL---KSRWEVGCSLVKIVYHRVNGL 307
H G + +A + S G + +WD G L + + G ++ + + R +
Sbjct: 624 HKGPIHSLAFSPNGKFLASGSTDGRVLLWDI-GHGLMIAELKGHTG-TIYALKFSRDGEI 681
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRIT 339
+A+ + D +RL+DV +R + E TD T
Sbjct: 682 IASGSIDNTVRLWDV--MRAIDDVE--TDDFT 709
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 134 (52.2 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 23/91 (25%), Positives = 51/91 (56%)
Query: 274 GDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEG 333
G +K+WD + + ++ ++ + ++ + + + D I+++D+ +++ +G
Sbjct: 164 GTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQG 223
Query: 334 HTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
H D +T S DG +LLS+ MD S+R+WD+
Sbjct: 224 HGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 44/194 (22%), Positives = 89/194 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV-GCS--LVKIVYHRVNGL 307
H GEV + S+GY I +W+ G D ++ + G S ++++ Y+ L
Sbjct: 55 HEGEVYCCKFHPNGATLASSGYDRLILMWNVYG-DCENYATLKGHSGAVMELHYNTDGSL 113
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDGKWLLSSGMD-GSLRIWDVI 365
L + + D + ++D V++ +GHT + CF + G L +G D G++++WD+
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSFVNS-CFPARRGPQLACTGSDDGTVKLWDIR 172
Query: 366 LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW---VNRCMFS----GDS--NI 416
+ + +++ + D + + +D N + +W N+ ++S GDS +
Sbjct: 173 KKASVHTFQNTYQVLSVTFNDTSDQIISGGID-NDIKVWDLRQNKLIYSMQGHGDSVTGL 231
Query: 417 DSYASGKEIVSVKM 430
A G ++S M
Sbjct: 232 SLSADGSYLLSNSM 245
Score = 95 (38.5 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F +G L +SG +I +WN+ + H A++ LH+ + +L
Sbjct: 57 GEVYCCKFHPNGATLASSGYDR-LILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLF 115
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 116 SASTDKTVCVW--DSETGE-RVKRLK-GHTS 142
Score = 95 (38.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL-KSRWEVGCSLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S G S+ + L + +
Sbjct: 185 QVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNS 244
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++D+ R V+ F+G+ C +S DG + + D + IWD
Sbjct: 245 MDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDT 304
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
R + + H S+ ++ P ++ + D+ +Y+
Sbjct: 305 TTRRIVYKLPGHAG-SVNEVAFHPEEPIVLSGSSDKR-LYI 343
Score = 79 (32.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 25/127 (19%), Positives = 50/127 (39%)
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLV 297
S H V G++ + + ++S ++VWD + K R +L+
Sbjct: 220 SMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLL 279
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
+ + +A + D + ++D R+V K GH + + F + +LS D
Sbjct: 280 RCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDK 339
Query: 358 SLRIWDV 364
L I ++
Sbjct: 340 RLYIGEI 346
Score = 71 (30.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 134
SGH C +F+ NG + S+G DR +++V D ++ + H
Sbjct: 53 SGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGH 98
Score = 67 (28.6 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR--EAHDNAIISLHFFANEPVL 61
AV + L+A+ S + ++ LQ+ I H+ + F N L
Sbjct: 12 AVVPVGVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGATL 71
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 114
S+ D I MW GD GHS + + + +G + SA D+
Sbjct: 72 ASSGYDRLILMW---NVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDK 121
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 129 (50.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 49/203 (24%), Positives = 96/203 (47%)
Query: 247 SNYAHNGEVVGVACDSTN-TLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRV 304
S++A V A S N L+ +A ++++D G +++ E + ++ +H
Sbjct: 138 SSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPW 197
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+LA I++FDV ++++ + H+ + D F G +LLS D ++RI D+
Sbjct: 198 GNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDL 257
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASG 422
+ R I + H D ++ A++ S + D AT D+ + +W + + + D++ + +
Sbjct: 258 LEGRPIYTLTGHTD-AVNAVAFSRDGDKFATGGSDRQ-LLVWQSN-LHTYDAS--QFEAK 312
Query: 423 KEIVSVKMPSVSSVEGCQDENSS 445
+ S S S V Q E SS
Sbjct: 313 SALASSSCES-SGVSSKQSEGSS 334
Score = 127 (49.8 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLL 308
+H+ V GVA L+ SAG+ +K+W+ K R + + V+ V + L+
Sbjct: 58 SHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLM 117
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
T +DD +++ V + V F + + FS +GK + ++ D S+RI+DV
Sbjct: 118 LTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDV 173
Score = 101 (40.6 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +T L F DG + S S VI +WNL + + + +H + + + ++
Sbjct: 19 GGITQLRFGPDGAQIATSSTDSTVI-LWNLNQAA-RCIRFASHSAPVNGVAWSPKGNLVA 76
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSG----HSAPPLCIRFYANGRHILSAGQDRAFRL 118
SA D ++K+W +P+L R SG HS + F + G +L+A D++ ++
Sbjct: 77 SAGHDRTVKIW-------EPKL-RGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKI 128
Query: 119 FSVIQDQQSRELSQRH 134
+ V + Q +Q++
Sbjct: 129 WRVARRQFVSSFAQQN 144
Score = 84 (34.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H I L F + + ++S D+++ +W + R +RF S HSAP + + G
Sbjct: 17 HSGGITQLRFGPDGAQIATSSTDSTVILWNLNQA---ARCIRFAS-HSAPVNGVAWSPKG 72
Query: 105 RHILSAGQDRAFRLF 119
+ SAG DR +++
Sbjct: 73 NLVASAGHDRTVKIW 87
Score = 53 (23.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 81 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
DP L R +GHS +RF +G I ++ D L+++ Q
Sbjct: 7 DPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQ 49
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 156 (60.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 44/186 (23%), Positives = 86/186 (46%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y ER+ H + +A + L+ SA IK+WD
Sbjct: 58 GKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDV 117
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
+ G+ +K+ + + ++ + L+ + + D +R++DV + H+D +T
Sbjct: 118 ESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTG 177
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD--VSITALSLSPNMDVLATAHVDQ 398
F+ DG ++S DG++RIWD + ++ I + ++ + SPN + +D
Sbjct: 178 VHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLD- 236
Query: 399 NGVYLW 404
N + LW
Sbjct: 237 NTLRLW 242
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 267 MISAGYHGDIKVWD-FKG---RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 322
+ SA IK+W + G R L+ E G S I + + + L+ + +DD I+++DV
Sbjct: 61 LASASADKTIKIWGAYDGKFERTLEGHKE-GIS--DIAWSQDSKLICSASDDKTIKIWDV 117
Query: 323 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR--QIDAIHVDVSIT 380
+ +MV+ +GH + + F+ ++S D ++RIWDV ++ + H D +T
Sbjct: 118 ESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSD-PVT 176
Query: 381 ALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDS-NIDSYASGKEIVSVK 429
+ + + ++ + D V +W +G N S GKE+ VK
Sbjct: 177 GVHFNRDGTLVVSGSYDGT-VRIWDTT---TGQLLNTISTEDGKEVSFVK 222
Score = 117 (46.2 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 41/165 (24%), Positives = 81/165 (49%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V GV + TL++S Y G +++WD G+ L + V V NG
Sbjct: 170 AHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKF 229
Query: 307 LLATVADDLVIRLFDVVA-LRMVRKFEGH-TDRITDFC-FSED-GKWLLSSGMDGSLRIW 362
+LA D+ +RL+ + ++ + GH ++ F FS GKW+++ D + I+
Sbjct: 230 VLAGTLDN-TLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY 288
Query: 363 DVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQN-GVYLW 404
++ + + H DV +T ++ P +++A+ ++++ V +W
Sbjct: 289 NLQTREIVQTLAGHEDVVLT-VACHPTENIIASGALEKDRSVKIW 332
Score = 117 (46.2 bits), Expect = 0.00078, P = 0.00078
Identities = 31/131 (23%), Positives = 65/131 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
VT + F+ DG L+ SG+ G + IW+ +L + I + + F N +++
Sbjct: 175 VTGVHFNRDGT-LVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAG 233
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI--RFYAN-GRHILSAGQDRAFRLFSV 121
+ DN++++W ++ + + L+ +GH CI F G+ I++ +D ++++
Sbjct: 234 TLDNTLRLWSYNN---NKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNL 290
Query: 122 IQDQQSRELSQ 132
Q+RE+ Q
Sbjct: 291 ----QTREIVQ 297
Score = 116 (45.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++F+ L+ SG+ + IW++ +I AH + + +HF + +++S
Sbjct: 133 VFGVSFNPQSN-LIVSGSFDENVRIWDVNTGECTKMI-SAHSDPVTGVHFNRDGTLVVSG 190
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC-IRFYANGRHILSAGQDRAFRLFS 120
S D ++++W DTT G +LL S + ++F NG+ +L+ D RL+S
Sbjct: 191 SYDGTVRIW--DTTTG--QLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWS 243
Score = 116 (45.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 28/127 (22%), Positives = 59/127 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+S D + L+ S + I IW++E ++ ++ H + + F +++S
Sbjct: 91 ISDIAWSQDSK-LICSASDDKTIKIWDVESGKMVKTLK-GHKEYVFGVSFNPQSNLIVSG 148
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D ++++W D G+ + S HS P + F +G ++S D R++
Sbjct: 149 SFDENVRIW--DVNTGE--CTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTG 204
Query: 125 QQSRELS 131
Q +S
Sbjct: 205 QLLNTIS 211
Score = 111 (44.1 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+++++ FS DG+ LAS ++ I IW + + + E H I + + + ++ S
Sbjct: 48 SISSVKFSPDGK-WLASASADKTIKIWGAYDGKFERTL-EGHKEGISDIAWSQDSKLICS 105
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IK+W D G ++++ GH + F I+S D R++ V
Sbjct: 106 ASDDKTIKIW--DVESG--KMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Query: 124 DQQSRELS 131
+ ++ +S
Sbjct: 162 GECTKMIS 169
Score = 76 (31.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +I S+ F + L SASAD +IK+W DG + R GH I +
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIW--GAYDG--KFERTLEGHKEGISDIAWSQ 98
Query: 103 NGRHILSAGQDRAFRLFSV 121
+ + I SA D+ +++ V
Sbjct: 99 DSKLICSASDDKTIKIWDV 117
Score = 57 (25.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 213 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 272
CG + V G+ I +NLQ+ R ++ H V+ VAC T ++ S
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQT---REIVQTLA-----GHEDVVLTVACHPTENIIASGAL 323
Query: 273 HGD--IKVW 279
D +K+W
Sbjct: 324 EKDRSVKIW 332
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 10/48 (20%), Positives = 23/48 (47%)
Query: 84 LLRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+L++ GH ++F +G+ + SA D+ +++ + R L
Sbjct: 37 ILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTL 84
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 132 (51.5 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 37/158 (23%), Positives = 74/158 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVG-CSLVKIVYHRVN-GL 307
H E++ ++ D++ +I+ + + VWD GR + + +G C+ + + L
Sbjct: 218 HLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL--IGHCAEISSALFSWDCSL 275
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+ T + D L+D + + V GH D I D CF GK + ++ DG+ R+++
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTR 335
Query: 368 RQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ I + + I+ +S +P + L T D+ +W
Sbjct: 336 KCITKLEGHEGEISKISFNPQGNRLLTGSSDKTA-RIW 372
Score = 119 (46.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWE--VGCSLVKIVYHRVNGLL 308
H+ E++ D T L+ +A G +V++ R ++ E G + KI ++ L
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEG-EISKISFNPQGNRL 360
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T + D R++DV + ++ EGHTD I F+ G +++ D S RIW
Sbjct: 361 LTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 111 (44.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
L+AT + D R+++ + + K EGH I+ F+ G LL+ D + RIWDV
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + + H D I + + + +++ T D N +W
Sbjct: 377 GQCLQVLEGHTD-EIFSCAFNYKGNIVITGSKD-NSCRIW 414
Score = 98 (39.6 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R V A+AF++ +A+G+ +W+ E + R H I+ L F V+
Sbjct: 134 RNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFR-GHTAEIVCLSFNPQSTVV 192
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+ S D + K+W D G+ + +GH A + + F +G I++ D
Sbjct: 193 ATGSMDTTAKLW--DIQSGEEVVTL--TGHLAEIISLSFDTSGDRIITGSFD 240
Score = 73 (30.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 29/137 (21%), Positives = 60/137 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPV--- 60
+T +A + G + +G+ +W+ L ++ E H N + ++ F N P
Sbjct: 95 LTNVALNKAGSCFI-TGSYDRTCKVWDTASGEELHTL--EGHRNVVYAIAF--NNPYGDK 149
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+ + S D + K+W +T FR GH+A +C+ F + + D +L+
Sbjct: 150 IATGSFDKTCKLWSAET---GKCYHTFR-GHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
Query: 121 VIQDQQSRELSQRHVAK 137
+ ++ L+ H+A+
Sbjct: 206 IQSGEEVVTLTG-HLAE 221
Score = 71 (30.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/115 (22%), Positives = 52/115 (45%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ L+F+ ++A+G+ +W+++ + V H IISL F + +++
Sbjct: 180 IVCLSFNPQST-VVATGSMDTTAKLWDIQSGE-EVVTLTGHLAEIISLSFDTSGDRIITG 237
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S D+++ +W D + G R + GH A F + IL+ D+ L+
Sbjct: 238 SFDHTVVVW--DASTG--RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLW 288
>UNIPROTKB|E1BB53 [details] [associations]
symbol:TEP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005697 "telomerase holoenzyme
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003720 "telomerase activity" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003723 GO:GO:0016363 GO:GO:0000722
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0005697 GO:GO:0003720
GeneTree:ENSGT00690000102183 OMA:SVPDAWK InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
EMBL:DAAA02028332 IPI:IPI00689872 Ensembl:ENSBTAT00000001564
Uniprot:E1BB53
Length = 2627
Score = 131 (51.2 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 86/312 (27%), Positives = 130/312 (41%)
Query: 199 PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL--DMSERSNYAHN-GEV 255
P+ P + C+ SAC V G A W + L S S GS D R H G
Sbjct: 2102 PKAPVLI--CSFSACHRDWVTGCA--WTKDSLLVSCSSDGSVALWDPESRQQLGHFLGHQ 2157
Query: 256 VGV-ACDSTNTLMISAGYHGDIKVWDFKGRDLKS-RWEVG--CSLVKIVYHRVNG----- 306
V A + ++S G G +KVWD +G ++ S G V + R G
Sbjct: 2158 HAVSAVVAVEEHVVSVGRDGTLKVWDHQGVEMTSIPAHSGPISHCVAALEPRAAGQPGSE 2217
Query: 307 -LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
L+ TV D RL+ + + GH+ ++ SE LL++ DGSLR+W V
Sbjct: 2218 LLVVTVGLDGATRLWHPLLVFQTHTLLGHSGPVSAAAVSETSGLLLTTSEDGSLRLWQV- 2276
Query: 366 LARQIDAIH---VDVSITALSLSPNMDVLATAHVDQNG-VYLW-----VNRCMFSGD-SN 415
++ D + +ITA++ +P D A +Q G + LW V G S
Sbjct: 2277 -PKEADDTYRPRSPAAITAVAWAP--DGSAAVSGNQAGELTLWQEAKAVVTVQAPGCISA 2333
Query: 416 IDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVH-RTDRVPKDSFGLPTFKQQIPDLVT 474
+ Y++ IV VS + + S+ +V R +RV ++ G T PD +
Sbjct: 2334 LLWYSAHTLIVVSANEKVSEWQVELQKGSTPRNVSLRLNRVLQEDLGFLTSVGLAPDAHS 2393
Query: 475 LSLLPKSQWQSL 486
L +L K+ Q L
Sbjct: 2394 L-ILAKADLQLL 2404
Score = 118 (46.6 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 36/125 (28%), Positives = 60/125 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV-IREAHDNAIISLHFFANEPVLM 62
AV+AL + S +L SGA G + W L+ LQS+ + H ++ L ++ +L
Sbjct: 1980 AVSALTWLSP--KVLVSGAEDGALQGWLLQGGTLQSLWLLSRHRKPVLGLA--TSQELLA 2035
Query: 63 SASADNSIKMW------IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAF 116
AS D ++++W + T+ PR R GH P C F +G + + G+DR+
Sbjct: 2036 IASEDFTVRLWPRQLLMLPQKTEDFPRSTELR-GHEGPVSCCSFSTDGCRLATGGRDRSL 2094
Query: 117 RLFSV 121
+ V
Sbjct: 2095 LCWDV 2099
Score = 85 (35.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 33/129 (25%), Positives = 58/129 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKR-RLQSVIREAHDNAIISLHFFANEPVLMS 63
V++ +F SD L A G++ +W+L+ R+ + +AH I + +L +
Sbjct: 1730 VSSCSFLSDNALFLT--AFDGLLELWDLQHGCRVLQI--QAHQYQITGCCLSPDRRLLAT 1785
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAP-PL-CIRFYANGRHILSAGQDRAFRLFSV 121
+K+W D G + S H+ P PL C+ F+ G+ I G +F F V
Sbjct: 1786 VCLGGGLKLW--DVVRG-----QLASQHTCPKPLNCVAFHPEGQVIAVGGWAGSFSFFHV 1838
Query: 122 IQDQQSREL 130
+ ++EL
Sbjct: 1839 DGLRVTKEL 1847
Score = 73 (30.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 32/131 (24%), Positives = 57/131 (43%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPVLM 62
+V LAF G+ ++A G ++ +W ++ RL + AH + + F + L+
Sbjct: 1853 SVRTLAFGVPGR-VVAVGRLDRMVELWAWQEGARLAAF--PAHQGFVATALFLRSGCQLL 1909
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL---SAGQDRAFRLF 119
+A D +++W + G PR S H +P L + +G + A R R+
Sbjct: 1910 TAGEDGKVQVW--SGSLGRPRGC-LGSPHLSPALSVALSPDGDQVAVGYRADGIRICRIS 1966
Query: 120 SVIQDQQSREL 130
S Q Q + L
Sbjct: 1967 SASQGAQGQAL 1977
Score = 57 (25.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 6 TALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSAS 65
TA+AFS +GQ A G ++G + + +L + + + D + S F ++ + ++A
Sbjct: 1689 TAVAFSPNGQRA-AVGTANGTVYLLDLRTWQDERSMVSGGDG-VSSCSFLSDNALFLTAF 1746
Query: 66 ADNSIKMW 73
D +++W
Sbjct: 1747 -DGLLELW 1753
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 125 (49.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 250 AHNGEVVGVACDSTN--TLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL 307
A + V C + L+IS G K+WD + R + + + +
Sbjct: 135 AEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADK 194
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ T D ++++D+ EGH D IT S DG +LL++GMD L +WD+
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 44/176 (25%), Positives = 76/176 (43%)
Query: 233 SGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV 292
+G +R S L+ H V + + TL+ S + +I +W G D K+ +
Sbjct: 34 NGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHG-DCKNFMVL 92
Query: 293 -GCSLVKIVYHRVN--GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKW 349
G + H + + + + D +R +DV + ++K H+ + C + G
Sbjct: 93 KGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPP 152
Query: 350 LLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ SG D G+ ++WD+ I ITA+S S D + T VD N V +W
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVD-NDVKVW 207
Score = 101 (40.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV + F+ G L+ASG+ I +W + ++ + H NAI+ LH+ ++ ++S
Sbjct: 55 AVYTMKFNPAGT-LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVS 113
Query: 64 ASADNSIKMWIFDT 77
AS D +++ W +T
Sbjct: 114 ASPDKTVRAWDVET 127
Score = 83 (34.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 21/93 (22%), Positives = 44/93 (47%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 99
++ H +A+ ++ F ++ S S D I +W GD + GH L +
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW---RVHGDCKNFMVLKGHKNAILDLH 103
Query: 100 FYANGRHILSAGQDRAFRLFSVIQDQQSRELSQ 132
+ ++G I+SA D+ R + V +Q +++++
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE 136
Score = 80 (33.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 39/176 (22%), Positives = 68/176 (38%)
Query: 242 DMSERS---NYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK 298
DM +R + ++ V+ + + G D+KVWD + + E +
Sbjct: 167 DMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTIT 226
Query: 299 IVYHRVNG-LLATVADDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKW 349
+ +G L T D + ++D+ R V+ FEGH C +S DG
Sbjct: 227 GMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTK 286
Query: 350 LLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
+ + D + IWD R I + H S+ P ++ + D+N +YL
Sbjct: 287 VTAGSSDRMVHIWDTTSRRTIYKLPGHTG-SVNECVFHPTEPIIGSCSSDKN-IYL 340
Score = 60 (26.2 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/123 (16%), Positives = 50/123 (40%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-----GRDLK----SRWEVGCSLVKIVY 301
H + G++ + +++ G + VWD + R +K + +L+K +
Sbjct: 221 HQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSW 280
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
+ + D ++ ++D + R + K GHT + + F + S D ++ +
Sbjct: 281 SPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Query: 362 WDV 364
++
Sbjct: 341 GEI 343
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 159 (61.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/169 (28%), Positives = 86/169 (50%)
Query: 262 STNTLMISAGY-HGDIKVWDF-KGR-DLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIR 318
S+ + +++ GY G I++WD KG ++ G ++ + Y++V +LA+ + D I
Sbjct: 73 SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKG-AVTALRYNKVGSMLASGSKDNDII 131
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR--QIDAIHVD 376
L+DVV + + GH D++TD F + GK L+SS D LR+WD+ QI + H
Sbjct: 132 LWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHS 191
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEI 425
+ ++ P + T DQ + V +S + ++ S ++ EI
Sbjct: 192 -EVWSVDTDPEERYVVTGSADQELRFYAVKE--YSSNGSLVSDSNANEI 237
Score = 128 (50.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AVT++A S+ L+A G + G I IW+ EK + V +H A+ +L + +L S
Sbjct: 67 AVTSIASSASS--LVAVGYADGSIRIWDTEKGTCE-VNFNSHKGAVTALRYNKVGSMLAS 123
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
S DN I +W D G+ L R R GH + F G+ ++S+ +D+ R++ ++
Sbjct: 124 GSKDNDIILW--DVV-GESGLFRLR-GHRDQVTDLVFLDGGKKLVSSSKDKFLRVWD-LE 178
Query: 124 DQQSRELSQRH 134
Q ++ H
Sbjct: 179 TQHCMQIVSGH 189
Score = 110 (43.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRV 304
S Y H V+ + S L+++ ++K+W DF G KS + G S++ + + R
Sbjct: 577 SLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDF-GDCHKSIFAHGDSVMGVKFVRN 635
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
L ++ D +++ +D + EGH I S G +L++ D S+R WD
Sbjct: 636 THYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 106 (42.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 30/120 (25%), Positives = 58/120 (48%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+GAVTAL ++ G +LASG+ I +W++ +R H + + L F L
Sbjct: 106 KGAVTALRYNKVGS-MLASGSKDNDIILWDVVGESGLFRLR-GHRDQVTDLVFLDGGKKL 163
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+S+S D +++W +T ++ SGH + + R++++ D+ R ++V
Sbjct: 164 VSSSKDKFLRVWDLETQ----HCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
Score = 92 (37.4 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 34/149 (22%), Positives = 68/149 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKG---RDLKSRWEVGCSLVKIVYHRVNG 306
H +V V NTL++S H ++K+W+ G R + S + + CSL IV G
Sbjct: 405 HRSDVRSVTLSEDNTLLMSTS-HSEVKIWNPSTGSCLRTIDSGYGL-CSL--IVPQNKYG 460
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
++ T + V+ + D+ + V + + H I + ++ D ++ W+ +
Sbjct: 461 IVGTKSG--VLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQV 518
Query: 367 ARQIDAIHVDVSITAL-SLSPNMDVLATA 394
++ ++++ + S+ N DVLA A
Sbjct: 519 KQKSGKATKKLTVSNVKSMKMNDDVLAVA 547
Score = 75 (31.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 32/168 (19%), Positives = 72/168 (42%)
Query: 208 CTISACGN-FAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTL 266
C++ N + ++GT G +E ++ GS + E AH G + + ++
Sbjct: 450 CSLIVPQNKYGIVGTKSGVLEIIDI------GSATKVEEVK--AHGGTIWSITPIPNDSG 501
Query: 267 MISAGYHGDIKVWDF--KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL--------- 315
++ ++K W++ K + K+ ++ S VK + + L ++ D
Sbjct: 502 FVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLD 561
Query: 316 -VIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+++F + +L+ GH + S DG+ +++ D +L+IW
Sbjct: 562 STVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIW 609
Score = 65 (27.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 21 GASSGVISIWNL-EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
G SGV+ I ++ +++ V +AH I S+ N+ ++ SAD+ +K W
Sbjct: 463 GTKSGVLEIIDIGSATKVEEV--KAHGGTIWSITPIPNDSGFVTVSADHEVKFW 514
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 241 LDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWD 280
LD + +S +AH V+GV + S G +K WD
Sbjct: 611 LDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWD 652
Score = 45 (20.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 332 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+GH + SED L+S+ ++IW+
Sbjct: 403 QGHRSDVRSVTLSEDNTLLMSTS-HSEVKIWN 433
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 159 (61.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/150 (24%), Positives = 72/150 (48%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVD 397
+ H + + PN +LA+ D
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSD 210
Score = 131 (51.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+ L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWD 133
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 129
G + R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 134 I-RRKGC--VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 130 (50.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 376
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW 404
++ S SP+ +A D+ VY+W
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRF-VYVW 313
Score = 126 (49.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 39/178 (21%), Positives = 80/178 (44%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 289
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 46 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 105
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 347
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 348 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ +G D G++++WD+ + + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 100 (40.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 316 TSRRVLYKLPGHAG-SINEVAFHPDEPIILSASSDKR-LYM 354
Score = 95 (38.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 77 (32.2 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 301
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
+A + D + ++D + R++ K GH I + F D +LS+ D L +
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Query: 362 WDV 364
++
Sbjct: 355 GEI 357
Score = 73 (30.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SGH C +F+ NG + SAG DR L++V D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Score = 65 (27.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 98
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 116
Query: 99 RFYANGRHILSAGQDR 114
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 136 (52.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 53/226 (23%), Positives = 99/226 (43%)
Query: 250 AHNGEVV-GVACDSTNTLMISAGYHGDIKVWDF----KGRDLKSRW-EVGCSLVKIVYHR 303
AH E + G+A T+ +A G +VWDF + R L+ EV C I +H
Sbjct: 214 AHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRC----IDWHP 269
Query: 304 VNGLLATVADDLV--IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
GL+AT + D ++++D + + + H + F+++G WLL+ G D +++
Sbjct: 270 TKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKM 329
Query: 362 WDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID--S 418
+D+ + +++ + +L+ P + L + + W M G+ I
Sbjct: 330 YDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYW----MVDGEKEIGLLE 385
Query: 419 YASGKEIVSVKMPSVSSV--EGCQDENSSQPDVHRTDRVPKDSFGL 462
+A + I S+K + + G D N+ +R +D FGL
Sbjct: 386 HAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPGDTVEDIFGL 431
Score = 99 (39.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++ +S +G+ L+ +G +G ++WN ++++ +AHD+AI +L + +NE L+SA
Sbjct: 136 VYSVCWSPEGKRLI-TGCQTGEFTLWNGTAFNFETIL-QAHDSAIRALKWASNEQWLLSA 193
Query: 65 SADNSIKMW 73
+K W
Sbjct: 194 DQGGYVKYW 202
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 129 (50.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 376
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW 404
++ S SP+ +A D+ VY+W
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRF-VYVW 312
Score = 127 (49.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 289
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 45 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 104
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 347
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 163
Query: 348 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 220
Score = 99 (39.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 254
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 255 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 315 TSRRILYKLPGHAG-SINEVAFHPDEPIIISASSDKR-LYM 353
Score = 95 (38.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 67 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 125
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 126 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 152
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/123 (19%), Positives = 51/123 (41%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 301
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 293
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
+A + D + ++D + R++ K GH I + F D ++S+ D L +
Sbjct: 294 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYM 353
Query: 362 WDV 364
++
Sbjct: 354 GEI 356
Score = 73 (30.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SGH C +F+ NG + SAG DR L++V D
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 98
Score = 65 (27.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 98
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 60 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 115
Query: 99 RFYANGRHILSAGQDR 114
+ +G + SA D+
Sbjct: 116 HYNTDGSMLFSASTDK 131
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 129 (50.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 376
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW 404
++ S SP+ +A D+ VY+W
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRF-VYVW 313
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 289
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 46 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 105
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 347
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 348 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 102 (41.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 40/161 (24%), Positives = 70/161 (43%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++DV R VR F+G+ C +S DG + + D + +WD
Sbjct: 256 MDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 316 TSRRILYKLPGHAG-SINEVAFHPDEPIILSASSDKR-LYM 354
Score = 95 (38.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 77 (32.2 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 301
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSW 294
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
+A + D + ++D + R++ K GH I + F D +LS+ D L +
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Query: 362 WDV 364
++
Sbjct: 355 GEI 357
Score = 73 (30.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SGH C +F+ NG + SAG DR L++V D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Score = 65 (27.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 98
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 116
Query: 99 RFYANGRHILSAGQDR 114
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 129 (50.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 376
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW 404
++ S SP+ +A D+ VY+W
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRF-VYVW 313
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 289
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 46 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 105
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 347
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 348 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 99 (39.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 316 TSRRILYKLPGHAG-SINEVAFHPDEPIILSASSDKR-LYM 354
Score = 95 (38.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 77 (32.2 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 301
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
+A + D + ++D + R++ K GH I + F D +LS+ D L +
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Query: 362 WDV 364
++
Sbjct: 355 GEI 357
Score = 73 (30.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SGH C +F+ NG + SAG DR L++V D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Score = 65 (27.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 98
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 116
Query: 99 RFYANGRHILSAGQDR 114
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 129 (50.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 376
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW 404
++ S SP+ +A D+ VY+W
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRF-VYVW 313
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 289
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 46 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 105
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 347
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 348 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 99 (39.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 316 TSRRILYKLPGHAG-SINEVAFHPDEPIILSASSDKR-LYM 354
Score = 95 (38.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 77 (32.2 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 301
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
+A + D + ++D + R++ K GH I + F D +LS+ D L +
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Query: 362 WDV 364
++
Sbjct: 355 GEI 357
Score = 73 (30.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SGH C +F+ NG + SAG DR L++V D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Score = 65 (27.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 98
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 116
Query: 99 RFYANGRHILSAGQDR 114
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 136 (52.9 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 395 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 454
Query: 361 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+WD+ + + H D ++ +L S + ++LA+ +D N V LW
Sbjct: 455 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLW 498
Score = 120 (47.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
NG LAT A D + L+D+ MV + +GHTD + FS DG+ L S MD ++R+WD
Sbjct: 440 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Query: 364 VILA 367
+ A
Sbjct: 500 AVKA 503
Score = 110 (43.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +FS D LL+S + G + +W+L+ V + H+ + F +
Sbjct: 304 GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQFSPYGYYFV 361
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S D ++W D P LR +GH A C RF+ N ++ + DR RL+ V+
Sbjct: 362 SGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVL 417
Score = 87 (35.7 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 290 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 345
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 346 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 388
Score = 79 (32.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 239 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLID------------KESDDVLE 285
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 286 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 332
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR---DLKSRWEVGCSLVKIVYHRVNG 306
H G + + + + G + +WD G +LK + CSL + R
Sbjct: 428 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR---FSRDGE 484
Query: 307 LLATVADDLVIRLFDVV 323
+LA+ + D +RL+D V
Sbjct: 485 ILASGSMDNTVRLWDAV 501
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 135 (52.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 244 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKI-VYH 302
+E+ H G V+ A + S K+W F+ + + + V+ +
Sbjct: 1079 TEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFS 1138
Query: 303 RVNGLLATVADDLVIRLFDVVALRMVRKFEG---------HTDRITDFCFSEDGKWLLSS 353
N LLAT D IR++D++ ++ H +TD FS D K L+SS
Sbjct: 1139 PSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSS 1198
Query: 354 GMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGVYLWVNR 407
G G L+ WDV + + + ++ ++ +SPN DV T VD G+ L+V R
Sbjct: 1199 G--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVT--VDNLGI-LYVLR 1248
Score = 103 (41.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 35/136 (25%), Positives = 62/136 (45%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPV 60
R AV FS D Q + + GA + ++ E RL + AHD+ I+ F A++
Sbjct: 614 RDAVYHACFSRDRQRIASCGADK-TLQVFKAESGERLLEI--SAHDDEILCCTFSADDKY 670
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAFRLF 119
+ + SAD +K+W ++ G + L H+ C +F G+++L+ D +
Sbjct: 671 VATCSADKKVKIW--NSRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKL 726
Query: 120 SVIQDQQSRELSQRHV 135
++D+ R HV
Sbjct: 727 WDLKDKYCRNTMFGHV 742
Score = 102 (41.0 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 264 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN---GLLATVADDLVIRLF 320
N+ ++S + G +KVW+ K+ + C ++ V+ ++ + D +++
Sbjct: 1057 NSKLLSWSFDGTVKVWNITTG--KTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1114
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVILARQI---DAIHVD 376
+ ++ + +GH + FS K LL++G D G +RIWD++ + ++ VD
Sbjct: 1115 SFESSSVLHELKGHEACVRCSAFSPSNK-LLATGDDKGDIRIWDILTGELLHFCSSVTVD 1173
Query: 377 VS-------ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 428
+T LS SP+ +L V G W + + +G+S Y +G + S+
Sbjct: 1174 EEEPTHGGWVTDLSFSPDSKML----VSSGGYLKWWD--VTTGESLQTFYTNGTNLKSI 1226
Score = 94 (38.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 273 HGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 331
+G IKV GR L SR S+ + L + A D VI++++ V
Sbjct: 984 NGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-L 1042
Query: 332 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR-QID-AIHVDVSITALSLSPNMD 389
+GH + I DF F E+ K LLS DG++++W++ + + D A H ++ + ++SP+
Sbjct: 1043 KGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRG-AVLSCAVSPDGS 1100
Query: 390 VLATAHVDQNGVYLW 404
++ D+ +W
Sbjct: 1101 RFSSTSADKTAK-IW 1114
Score = 88 (36.0 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
GQ LLA+ + I +W+L+ + ++ + H NA+ F N+ + S S D ++K+W
Sbjct: 711 GQYLLATCSDDTYIKLWDLKDKYCRNTMF-GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 769
Score = 88 (36.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI- 365
L+A I L+++ +L V GHT + FS DG L+S D ++RIW+
Sbjct: 853 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 912
Query: 366 LARQIDAI 373
+ + DA+
Sbjct: 913 VCKSSDAV 920
Score = 61 (26.5 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 17/76 (22%), Positives = 39/76 (51%)
Query: 44 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 103
+H + I F A + ++ A + SI++W + ++ R GH++ C+ F ++
Sbjct: 837 SHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSLS---KVADCR-GHTSWVHCVTFSSD 892
Query: 104 GRHILSAGQDRAFRLF 119
G L++ +D+ R++
Sbjct: 893 GSLFLTSSEDQTIRIW 908
Score = 60 (26.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
G L+A S I +WN++ + R H + + + F ++ + +++S D +I++W
Sbjct: 850 GDELVAVALSHCSIELWNIKSLSKVADCR-GHTSWVHCVTFSSDGSLFLTSSEDQTIRIW 908
Score = 59 (25.8 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 26/121 (21%), Positives = 52/121 (42%)
Query: 12 SDGQPLLASGASSGVISIWNL-EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
S+ A G +G I + L + R L S REA+ ++ F + L+S++ D I
Sbjct: 972 SEDLKFAAFGQENGAIKVLRLLDGRVLTS--REAYRTSVQHCRFTTDCQTLISSAHDAVI 1029
Query: 71 KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
++W + + F GH F N + +LS D +++++ + ++
Sbjct: 1030 QVWNWQLNE-----CVFLKGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDF 1083
Query: 131 S 131
+
Sbjct: 1084 A 1084
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEK--RRLQSVIREA-----HDNAIISLHFFAN 57
V + FSSDG L S I IW K + +V++ H+ ++ L +
Sbjct: 884 VHCVTFSSDGSLFLTSSEDQ-TIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQ 942
Query: 58 EPV-LMSASADNSI 70
+ + L++ + D+ I
Sbjct: 943 KHIQLINGNTDSII 956
Score = 46 (21.3 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSV-IREAHDNA 48
AV+ FS + +AS ++ G + +WN+ L+++ I++ NA
Sbjct: 744 AVSHCRFSPNDD-YIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 789
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 129 (50.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 376
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW 404
++ S SP+ +A D+ VY+W
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRF-VYVW 312
Score = 127 (49.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 289
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 45 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 104
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 347
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 163
Query: 348 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 220
Score = 97 (39.2 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 40/160 (25%), Positives = 68/160 (42%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 254
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 255 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATA-H-VDQNG 400
R + + H SI ++ P+ ++ T H + Q G
Sbjct: 315 TSRRILYKLPGHAG-SINEVAFHPDEPIIETGFHRIGQGG 353
Score = 95 (38.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 67 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 125
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 126 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 152
Score = 73 (30.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SGH C +F+ NG + SAG DR L++V D
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 98
Score = 65 (27.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 98
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 60 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 115
Query: 99 RFYANGRHILSAGQDR 114
+ +G + SA D+
Sbjct: 116 HYNTDGSMLFSASTDK 131
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 133 (51.9 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 244 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKI-VYH 302
+E+ H G V+ A + S K+W F+ + + + V+ +
Sbjct: 1080 TEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFS 1139
Query: 303 RVNGLLATVADDLVIRLFDVVALRMVRKFEG---------HTDRITDFCFSEDGKWLLSS 353
N LLAT D IR++D++ ++ H +TD FS D K L+SS
Sbjct: 1140 PSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSS 1199
Query: 354 GMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGVYLWV 405
G G L+ WDV + + + ++ ++ +SPN DV T VD G+ L+V
Sbjct: 1200 G--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVT--VDNLGI-LYV 1247
Score = 103 (41.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 35/136 (25%), Positives = 62/136 (45%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPV 60
R AV FS D Q + + GA + ++ E RL + AHD+ I+ F A++
Sbjct: 615 RDAVYHACFSRDRQRIASCGADK-TLQVFKAESGERLLEI--SAHDDEILCCTFSADDKY 671
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAFRLF 119
+ + SAD +K+W ++ G + L H+ C +F G+++L+ D +
Sbjct: 672 VATCSADKKVKIW--NSRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKL 727
Query: 120 SVIQDQQSRELSQRHV 135
++D+ R HV
Sbjct: 728 WDLKDKYCRNTMFGHV 743
Score = 102 (41.0 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 264 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN---GLLATVADDLVIRLF 320
N+ ++S + G +KVW+ K+ + C ++ V+ ++ + D +++
Sbjct: 1058 NSKLLSWSFDGTVKVWNITTG--KTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1115
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVILARQI---DAIHVD 376
+ ++ + +GH + FS K LL++G D G +RIWD++ + ++ VD
Sbjct: 1116 SFESSSVLHELKGHEACVRCSAFSPSNK-LLATGDDKGDIRIWDILTGELLHFCSSVTVD 1174
Query: 377 VS-------ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 428
+T LS SP+ +L V G W + + +G+S Y +G + S+
Sbjct: 1175 EEEPTHGGWVTDLSFSPDSKML----VSSGGYLKWWD--VTTGESLQTFYTNGTNLKSI 1227
Score = 94 (38.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 273 HGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 331
+G IKV GR L SR S+ + L + A D VI++++ V
Sbjct: 985 NGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-L 1043
Query: 332 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR-QID-AIHVDVSITALSLSPNMD 389
+GH + I DF F E+ K LLS DG++++W++ + + D A H ++ + ++SP+
Sbjct: 1044 KGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRG-AVLSCAVSPDGS 1101
Query: 390 VLATAHVDQNGVYLW 404
++ D+ +W
Sbjct: 1102 RFSSTSADKTAK-IW 1115
Score = 88 (36.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
GQ LLA+ + I +W+L+ + ++ + H NA+ F N+ + S S D ++K+W
Sbjct: 712 GQYLLATCSDDTYIKLWDLKDKYCRNTMF-GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 770
Score = 88 (36.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI- 365
L+A I L+++ +L V GHT + FS DG L+S D ++RIW+
Sbjct: 854 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 913
Query: 366 LARQIDAI 373
+ + DA+
Sbjct: 914 VCKSSDAV 921
Score = 61 (26.5 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 17/76 (22%), Positives = 39/76 (51%)
Query: 44 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 103
+H + I F A + ++ A + SI++W + ++ R GH++ C+ F ++
Sbjct: 838 SHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSLS---KVADCR-GHTSWVHCVTFSSD 893
Query: 104 GRHILSAGQDRAFRLF 119
G L++ +D+ R++
Sbjct: 894 GSLFLTSSEDQTIRIW 909
Score = 60 (26.2 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
G L+A S I +WN++ + R H + + + F ++ + +++S D +I++W
Sbjct: 851 GDELVAVALSHCSIELWNIKSLSKVADCR-GHTSWVHCVTFSSDGSLFLTSSEDQTIRIW 909
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/121 (21%), Positives = 52/121 (42%)
Query: 12 SDGQPLLASGASSGVISIWNL-EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
S+ A G +G I + L + R L S REA+ ++ F + L+S++ D I
Sbjct: 973 SEDLKFAAFGQENGAIKVLRLLDGRVLTS--REAYRTSVQHCRFTTDCQTLISSAHDAVI 1030
Query: 71 KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
++W + + F GH F N + +LS D +++++ + ++
Sbjct: 1031 QVWNWQLNE-----CVFLKGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDF 1084
Query: 131 S 131
+
Sbjct: 1085 A 1085
Score = 47 (21.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEK--RRLQSVIREA-----HDNAIISLHFFAN 57
V + FSSDG L S I IW K + +V++ H+ ++ L +
Sbjct: 885 VHCVTFSSDGSLFLTSSEDQ-TIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQ 943
Query: 58 EPV-LMSASADNSI 70
+ + L++ + D+ I
Sbjct: 944 KHIQLINGNTDSII 957
Score = 46 (21.3 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSV-IREAHDNA 48
AV+ FS + +AS ++ G + +WN+ L+++ I++ NA
Sbjct: 745 AVSHCRFSPNDD-YIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 790
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 42/178 (23%), Positives = 77/178 (43%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW 290
L+SG+ R S L H GE+ L++S+G+ I +W D ++
Sbjct: 34 LESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVY-EDCENVM 92
Query: 291 EV-GCS-LVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDG 347
+ G S V + +G + T + D + +D+ + R+F+GH + + S G
Sbjct: 93 AMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRG 152
Query: 348 KWLLSSGMDG-SLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ LL SG D +++IWD + +TA+ + + + +D N V +W
Sbjct: 153 QQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGID-NEVKIW 209
Score = 126 (49.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ S IK+WD + + E + + + + + D ++++D+
Sbjct: 155 LLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQ 214
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 376
++ GH+D IT S +G ++L++ MD +LR+WDV + Q + +
Sbjct: 215 AVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFE 274
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW-VN 406
++ + SP D + + D++ VY+W VN
Sbjct: 275 KNLLRCAWSPGSDKITSGSADRH-VYIWDVN 304
Score = 94 (38.1 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 28/118 (23%), Positives = 52/118 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G + F +G+ LL+SG + IW + + + H A++ HF + +
Sbjct: 56 GEIFTAEFHPEGELLLSSGFDRQIY-IWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIF 114
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD-RAFRLF 119
+ S D ++ W D G R RF+ GH ++ G+ +L +G D R +++
Sbjct: 115 TCSTDKTLAFW--DIATGQ-RQRRFK-GHGNFVNSVQGSRRGQQLLCSGSDDRTIKIW 168
Score = 91 (37.1 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 8 LAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASAD 67
+A+++ + LL SGV NL+ +Q E H+ I + F +L+S+ D
Sbjct: 24 MAYTNRDKALL----ESGVRRTSNLQAPIMQL---EGHEGEIFTAEFHPEGELLLSSGFD 76
Query: 68 NSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 126
I +W +++ + + SGHS + F +G HI + D+ + + Q+
Sbjct: 77 RQIYIWQVYEDCEN----VMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQR 132
Query: 127 SR 128
R
Sbjct: 133 QR 134
Score = 90 (36.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 39/161 (24%), Positives = 68/161 (42%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVA 312
+V V T +IS G ++K+WD + + + + + G + T A
Sbjct: 184 QVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNA 243
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---CFSEDGKWLLSSGM-DGSLRIWDV 364
D +R++DV R V+ F+GH C G ++SG D + IWDV
Sbjct: 244 MDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDV 303
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
R + + H + S+ A+ SP ++ + D+ +YL
Sbjct: 304 NTRRILYKLPGH-NGSVNAVDFSPKEPLILSGSSDKT-LYL 342
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 114 (45.2 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLE-KRRLQSVIREAHDNAIISLHFFANEPV 60
+ +VT FS D L+A+G SG++ +W +E K + S EA D + H PV
Sbjct: 135 KDSVTCAGFSHDST-LVATGDMSGLLKVWQVETKEEVWSF--EAGDLEWMEWH--PRAPV 189
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++ +AD + MW +GD + + G + P C R +G+ + +D R++
Sbjct: 190 LLAGTADGNTWMW--KVPNGDCKTFQ---GPNCPATCGRVLPDGKRAVVGYEDGTIRIWD 244
Query: 121 VIQ 123
+ Q
Sbjct: 245 LKQ 247
Score = 110 (43.8 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 38/153 (24%), Positives = 75/153 (49%)
Query: 213 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 272
C V T G + F ++ S+ S L E S +++ E +G C S L + GY
Sbjct: 283 CQAKLVSATTGKVVGVFRPETVASQPS-LGEGEESE-SNSVESLGF-C-SVMPLA-AVGY 337
Query: 273 -HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 331
G + ++D + L+ + + +V++++ ++ T + D V+RL+D R++ +
Sbjct: 338 LDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDY 397
Query: 332 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
GHT I DF S+D ++++ D +++ V
Sbjct: 398 RGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 430
Score = 68 (29.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 67 DNSIKMWIFDTTDGDP-RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
D +I++W D G+P +L+ GH P C+ +G IL+ D +L S
Sbjct: 237 DGTIRIW--DLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVS 289
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 132 (51.5 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 37/165 (22%), Positives = 79/165 (47%)
Query: 250 AHN-GEVVGVACDSTNTLMISAGYHGDIKVWDF----KGRDLKSR-WEVGCSLVKIVYHR 303
AH ++ G++ T+ + S IK+WDF + L W+V C + +H
Sbjct: 206 AHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKC----VSWHP 261
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
L+ + D I+++D + + + GH ++ ++++G W++S+ D L+++D
Sbjct: 262 QKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFD 321
Query: 364 VILARQIDAI--HVDVSITALSLSP-NMDVLATAHVDQNGVYLWV 405
+ +++ H +TAL+L P + D+ + D +Y W+
Sbjct: 322 IRTMKEMQTFKGH-GKEVTALALHPYHEDLFVSGDKDGKILY-WI 364
Score = 94 (38.1 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 19/69 (27%), Positives = 43/69 (62%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ ++++ +G+ L+ +G+SSG ++WN ++++ +AHD+A+ S+ + NE ++S
Sbjct: 128 INCVSWTPEGRRLV-TGSSSGEFTLWNGLTFNFETIL-QAHDSAVRSIIWSHNEDWMVSG 185
Query: 65 SADNSIKMW 73
+IK W
Sbjct: 186 DDSGNIKYW 194
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 138 (53.6 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 264 NTLMISAGYHGDIKVWDFKGRD--LKSR---WEVGCSLVKIVYHRVNGLLATVADDLVIR 318
N L G + VWD++ LK + ++V C + Y + LLAT ADD ++
Sbjct: 359 NWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNC----VTYSPDSQLLATGADDNKVK 414
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV- 377
+++V++ F HT+ +T F D LLS+ +DG++R WD +
Sbjct: 415 VWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTP 474
Query: 378 -SITALSLSPNMDVLATAHVDQNGVYLW 404
+L+ P+ DV+ +D +++W
Sbjct: 475 RQFVSLTADPSGDVVCAGTLDSFEIFVW 502
Score = 123 (48.4 bits), Expect = 8.1e-10, Sum P(3) = 8.1e-10
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V + +S D Q LLA+GA + +WN+ E H NA+ +LHF A+ L+SA
Sbjct: 392 VNCVTYSPDSQ-LLATGADDNKVKVWNVMSGTCFITFTE-HTNAVTALHFMADNHSLLSA 449
Query: 65 SADNSIKMWIF 75
S D +++ W F
Sbjct: 450 SLDGTVRAWDF 460
Score = 105 (42.0 bits), Expect = 8.1e-10, Sum P(3) = 8.1e-10
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 275 DIKVWDFK-G--RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALR-MVRK 330
+I VW K G +D+ S E + +++ + LLA+ + D +RL+DV A + V
Sbjct: 498 EIFVWSKKTGQIKDILSGHEA--PVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVET 555
Query: 331 FEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
F + D +T F DGK L SS +DG + WD I
Sbjct: 556 FRHNHDVLT-VAFRPDGKQLASSTLDGQINFWDTI 589
Score = 67 (28.6 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 26/118 (22%), Positives = 50/118 (42%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI--REAHDNAIISLHFFANEP 59
R +T F+ G L A G + +W+ R ++ I ++ H + + + +
Sbjct: 346 RQKLTTAVFNERGNWLTFGCAKLGQLLVWDW---RTETYILKQQGHYFDVNCVTYSPDSQ 402
Query: 60 VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+L + + DN +K+W + G + F H+ + F A+ +LSA D R
Sbjct: 403 LLATGADDNKVKVW--NVMSGTC-FITFTE-HTNAVTALHFMADNHSLLSASLDGTVR 456
Score = 58 (25.5 bits), Expect = 4.0e-06, Sum P(4) = 4.0e-06
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 339 TDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 398
T C+S DG ++L++G + ++D+ A Q+ +S LSL +D L + + +
Sbjct: 625 TTLCYSADGGYILAAGTSRYICMYDI--ADQVLLRRFQISHN-LSLDGVLDFLHSKKMTE 681
Query: 399 NGVYLWVNRCMFSGDSNIDSYASG 422
G ++ + ID + G
Sbjct: 682 AGPIDLIDDDNSDEEGGIDKQSRG 705
Score = 50 (22.7 bits), Expect = 4.0e-06, Sum P(4) = 4.0e-06
Identities = 16/87 (18%), Positives = 34/87 (39%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V G+ L+ S+ + +++WD F + + ++ + + LA
Sbjct: 516 HEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLA 575
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTD 336
+ D I +D + ++ EG D
Sbjct: 576 SSTLDGQINFWDTIEGVLMYTIEGRRD 602
Score = 46 (21.3 bits), Expect = 8.1e-10, Sum P(3) = 8.1e-10
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 601 RPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETV-RCHTKLQDKARKLLEVQ 659
R +YL E L++ L+ + + EFI + K HG ++ R + L R L +
Sbjct: 815 RQKYL--ERLMEALVDLLENCPHLEFILHWCQEICKAHGSSIQRNYRTLLPALRSLQKAI 872
Query: 660 SAVWQKIDKMFQSARCVVSFL 680
+ Q + M S + +L
Sbjct: 873 TRAHQDLADMCSSNEYTLRYL 893
Score = 46 (21.3 bits), Expect = 9.8e-06, Sum P(4) = 9.8e-06
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 249 YAHNGEVVGVACDSTNTLMISAGYHGDIKVWD 280
+ HN +V+ VA + S+ G I WD
Sbjct: 556 FRHNHDVLTVAFRPDGKQLASSTLDGQINFWD 587
Score = 43 (20.2 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 22/101 (21%), Positives = 44/101 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE-----AHDNAIISLHFFANEP 59
V +L +S D LL G+ ++ + R+L+ V+ + H ++++ F ++
Sbjct: 144 VVSLEWSLDSDYLLV-GSRDLAARLFCV--RKLKGVLNKPFLFLGHRDSVVGCFFGVDKM 200
Query: 60 V-----LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 95
+ + D I W + T+ D ++ GHS PP
Sbjct: 201 TNKVNRAFTIARDGYIFSWGY--TEKDVKMDESEDGHSEPP 239
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 129 (50.5 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 33/148 (22%), Positives = 71/148 (47%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 193 LVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 252
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 376
++ GH D +T S +G +LLS+ MD ++RIWDV + Q + + +
Sbjct: 253 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFE 312
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW 404
++ S SP+ +A D+ VY+W
Sbjct: 313 KNLLRCSWSPDGSKIAGGSADRF-VYVW 339
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 40/178 (22%), Positives = 79/178 (44%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 289
LQSG R S L H GEV + SAG+ I +W+ G D +
Sbjct: 72 LQSGPPRCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYAT 131
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 347
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 132 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 190
Query: 348 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ +G D G++++WD+ + + A++ + D + + +D N + +W
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 247
Score = 100 (40.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 39/161 (24%), Positives = 68/161 (42%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 222 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 281
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++DV R V+ F+G+ C +S DG + D + +WD
Sbjct: 282 MDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDT 341
Query: 365 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 403
R + + H S+ L+ P ++ +A D+ +Y+
Sbjct: 342 TSRRILYKLPGHAG-SVNELAFHPEEPIILSASSDKR-LYM 380
Score = 90 (36.7 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 94 GEVYCCKFHPWGNTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 152
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 153 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 179
Score = 64 (27.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SGH C +F+ G + SAG DR L++V D
Sbjct: 90 SGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGD 125
Score = 55 (24.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 23/102 (22%), Positives = 39/102 (38%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
GQP + SG +L+ ++ H+ + F L SA D I +W
Sbjct: 64 GQPSTGALLQSGPPRCSSLQA---PIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLW 120
Query: 74 -IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 114
++ D L GHS + + + +G + SA D+
Sbjct: 121 NVYGDCDNYATL----KGHSGAVMELHYNTDGSMLFSASTDK 158
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 112 (44.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLE-KRRLQSVIREAHDNAIISLHFFANEPV 60
+ +VT FS D L+A+G SG++ +W ++ K + S EA D + H PV
Sbjct: 134 KDSVTCAGFSHDST-LVATGDMSGLLKVWQVDTKEEVWSF--EAGDLEWMEWH--PRAPV 188
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++ +AD + MW T GD + + G + P C R +G+ + +D R++
Sbjct: 189 LLAGTADGNTWMWKVPT--GDCKTFQ---GPNCPATCGRVLPDGKRAVVGYEDGTIRIWD 243
Query: 121 VIQ 123
+ Q
Sbjct: 244 LKQ 246
Score = 109 (43.4 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 213 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 272
C V T G + F ++ S+ S L E S +++ E +G C S L + GY
Sbjct: 282 CQAKLVSATTGKVVGVFRPETVASQPS-LGEGEESE-SNSVESLGF-C-SVMPLA-AVGY 336
Query: 273 -HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 331
G + ++D + L+ + + +V++++ ++ T + D ++RL+D R++ +
Sbjct: 337 LDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDY 396
Query: 332 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
GHT I DF S+D ++++ D +++ V
Sbjct: 397 RGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 429
Score = 60 (26.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 67 DNSIKMWIFDTTDGDP-RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
D +I++W D G+ +L+ GH P C+ +G IL+ D +L S
Sbjct: 236 DGTIRIW--DLKQGNSIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVS 288
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 151 (58.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 43/129 (33%), Positives = 65/129 (50%)
Query: 314 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 373
D +RL+ VR F GH + FS +GK+L S+G D L++WD+ +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 374 --HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 431
H D SIT+L+ SP+ ++A+A +D N V +W R S N + S E+V V
Sbjct: 61 RGHTD-SITSLAFSPDSGLIASASMD-NSVRVWDIR---STCCNTPADGSSGELVGVYTG 115
Query: 432 SVSSVEGCQ 440
+S+V Q
Sbjct: 116 QMSNVLSVQ 124
Score = 124 (48.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
NG LA+ +D ++L+D+ + + ++ GHTD IT FS D + S+ MD S+R+WD
Sbjct: 33 NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWD 92
Query: 364 V 364
+
Sbjct: 93 I 93
Score = 115 (45.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 34/108 (31%), Positives = 56/108 (51%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RG V +L+FS +G+ LAS + +W+L L +R H ++I SL F + ++
Sbjct: 22 RGPVLSLSFSPNGK-YLASAGEDQRLKLWDLASGTLFKELR-GHTDSITSLAFSPDSGLI 79
Query: 62 MSASADNSIKMWIFDTT------DGDP-RLLRFRSGHSAPPLCIRFYA 102
SAS DNS+++W +T DG L+ +G + L ++F A
Sbjct: 80 ASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMA 127
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 135 (52.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 244 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKI-VYH 302
+E+ H G V+ A + S K+W F+ + + + V+ +
Sbjct: 1083 TEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFS 1142
Query: 303 RVNGLLATVADDLVIRLFDVVALRMVRKFEG---------HTDRITDFCFSEDGKWLLSS 353
N LLAT D IR++D++ ++ H +TD FS D K L+SS
Sbjct: 1143 PSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSS 1202
Query: 354 GMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGVYLWVNR 407
G G L+ WDV + + + ++ ++ +SPN DV T VD G+ L+V R
Sbjct: 1203 G--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVT--VDNLGI-LYVLR 1252
Score = 102 (41.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 264 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN---GLLATVADDLVIRLF 320
N+ ++S + G +KVW+ K+ + C ++ V+ ++ + D +++
Sbjct: 1061 NSKLLSWSFDGTVKVWNITTG--KTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1118
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVILARQI---DAIHVD 376
+ ++ + +GH + FS K LL++G D G +RIWD++ + ++ VD
Sbjct: 1119 SFESSSVLHELKGHEACVRCSAFSPSNK-LLATGDDKGDIRIWDILTGELLHFCSSVTVD 1177
Query: 377 VS-------ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 428
+T LS SP+ +L V G W + + +G+S Y +G + S+
Sbjct: 1178 EEEPTHGGWVTDLSFSPDSKML----VSSGGYLKWWD--VTTGESLQTFYTNGTNLKSI 1230
Score = 96 (38.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPV 60
R AV FS D Q + + GA + ++ E RL + AHD+ I+ F A++
Sbjct: 614 RDAVYHACFSRDRQRIASCGADK-TLQVFKAESGERLLEI--SAHDDEILCCTFSADDKY 670
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAF 116
+ + SAD +K+W ++ G + L H+ C +F G+++L+ D +
Sbjct: 671 VATCSADKKVKIW--NSRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTY 723
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 273 HGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 331
+G IKV GR L SR S+ + L + A D VI++++ V
Sbjct: 988 NGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-L 1046
Query: 332 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR-QID-AIHVDVSITALSLSPNMD 389
+GH + I DF F E+ K LLS DG++++W++ + + D A H ++ + ++SP+
Sbjct: 1047 KGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRG-AVLSCAVSPDGS 1104
Query: 390 VLATAHVDQNGVYLW 404
++ D+ +W
Sbjct: 1105 RFSSTSADKTAK-IW 1118
Score = 88 (36.0 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI- 365
L+A I L+++ +L V GHT + FS DG L+S D ++RIW+
Sbjct: 857 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 916
Query: 366 LARQIDAI 373
+ + DA+
Sbjct: 917 VCKSSDAV 924
Score = 76 (31.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/109 (22%), Positives = 51/109 (46%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIR---EAHDNAIISLHFFANEPVLMSASADNSIK 71
Q L + +G + + K+ L+++ R H +A+ F + + S AD +++
Sbjct: 580 QAKLRAQRETGTFYLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQ 639
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+F G+ RLL S H LC F A+ +++ + D+ ++++
Sbjct: 640 --VFKAESGE-RLLEI-SAHDDEILCCTFSADDKYVATCSADKKVKIWN 684
Score = 75 (31.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 14 GQPLLASGASS----GVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNS 69
GQ LLA+ + + +W+L+ + ++ + H NA+ F N+ + S S D +
Sbjct: 711 GQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMF-GHVNAVSHCRFSPNDDYIASCSTDGT 769
Query: 70 IKMW 73
+K+W
Sbjct: 770 VKLW 773
Score = 61 (26.5 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 17/76 (22%), Positives = 39/76 (51%)
Query: 44 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 103
+H + I F A + ++ A + SI++W + ++ R GH++ C+ F ++
Sbjct: 841 SHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSLS---KVADCR-GHTSWVHCVTFSSD 896
Query: 104 GRHILSAGQDRAFRLF 119
G L++ +D+ R++
Sbjct: 897 GSLFLTSSEDQTIRIW 912
Score = 60 (26.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
G L+A S I +WN++ + R H + + + F ++ + +++S D +I++W
Sbjct: 854 GDELVAVALSHCSIELWNIKSLSKVADCR-GHTSWVHCVTFSSDGSLFLTSSEDQTIRIW 912
Score = 59 (25.8 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 26/121 (21%), Positives = 52/121 (42%)
Query: 12 SDGQPLLASGASSGVISIWNL-EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
S+ A G +G I + L + R L S REA+ ++ F + L+S++ D I
Sbjct: 976 SEDLKFAAFGQENGAIKVLRLLDGRVLTS--REAYRTSVQHCRFTTDCQTLISSAHDAVI 1033
Query: 71 KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
++W + + F GH F N + +LS D +++++ + ++
Sbjct: 1034 QVWNWQLNE-----CVFLKGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDF 1087
Query: 131 S 131
+
Sbjct: 1088 A 1088
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEK--RRLQSVIREA-----HDNAIISLHFFAN 57
V + FSSDG L S I IW K + +V++ H+ ++ L +
Sbjct: 888 VHCVTFSSDGSLFLTSSEDQ-TIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQ 946
Query: 58 EPV-LMSASADNSI 70
+ + L++ + D+ I
Sbjct: 947 KHIQLINGNTDSII 960
Score = 46 (21.3 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSV-IREAHDNA 48
AV+ FS + +AS ++ G + +WN+ L+++ I++ NA
Sbjct: 748 AVSHCRFSPNDD-YIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 793
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 58/241 (24%), Positives = 105/241 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW------VNRCMFSGDSNIDSYAS 421
+ H + + PN +LA+ D+ + W V C+ G+ YA
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFWDLEKFQVVSCI-EGEPGPVRYA- 237
Query: 422 GKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRV-PKDSFGLPTFKQQIPDLVTLSLLPK 480
G +V + P V GC+ HR+ + P P F + P S LP+
Sbjct: 238 GSWVVGLSPPP--KVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPH----SRLPR 291
Query: 481 S 481
S
Sbjct: 292 S 292
Score = 131 (51.2 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+ L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWD 133
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 129
G + R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 134 I-RRKGC--VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 37/137 (27%), Positives = 68/137 (49%)
Query: 232 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 290 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 349 WLLSSGM-DGSLRIWDV 364
+LL+SG D ++R WD+
Sbjct: 202 YLLASGSSDRTIRFWDL 218
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLHFFANEPVLMS 63
+ +L F G+ +ASG+ I +W++ RR V R H A+ L F + L S
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
A+ D+++K+W D T G +++ GH+ P + F+ N + S DR R + +
Sbjct: 165 AADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 126 (49.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/99 (23%), Positives = 52/99 (52%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
++ GH D +T S +G +LLS+ MD ++R+WDV
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 40/178 (22%), Positives = 79/178 (44%)
Query: 231 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 289
LQ+G R S L H GEV + + SAG+ I +W G D +
Sbjct: 46 LQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYAT 105
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 347
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 348 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 90 (36.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V F +G L ++G +I +W++ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 93
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 86 (35.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 33/129 (25%), Positives = 53/129 (41%)
Query: 254 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 312
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 313 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 364
D +R++DV R V+ F+G+ C +S DG + + D L W
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHS 315
Query: 365 ILARQIDAI 373
+ R + I
Sbjct: 316 LSVRSLGQI 324
Score = 76 (31.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SGH C +F+ NG + SAG DR L+SV D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGD 99
Score = 65 (27.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 98
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATL----KGHSGAVMEL 116
Query: 99 RFYANGRHILSAGQDR 114
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 125 (49.1 bits), Expect = 0.00066, P = 0.00066
Identities = 37/156 (23%), Positives = 74/156 (47%)
Query: 252 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLAT 310
+ V G++ T ++++ + G I++WD++ L +++ V+ I +H + +
Sbjct: 11 SARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFHHDQPIFVS 70
Query: 311 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQI 370
DD I++++ R + GH D I F W++S+ D ++RIW+ I
Sbjct: 71 GGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSI 130
Query: 371 DAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ H + A P D++A+A +DQ V +W
Sbjct: 131 AILTGHNHYVMCA-QFHPTEDLVASASLDQT-VRVW 164
Score = 119 (46.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + F D QP+ SG I +WN +++R + H + I + F P ++
Sbjct: 54 GPVRGICFHHD-QPIFVSGGDDYKIKVWNYKQKRCIFTLL-GHLDYIRTTFFHHKYPWII 111
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++W + + + + +GH+ +C +F+ + SA D+ R++ +
Sbjct: 112 SASDDQTVRIWNWQSRNS----IAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDI 166
Score = 111 (44.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 29/148 (19%), Positives = 67/148 (45%)
Query: 299 IVYHRVNGLLATVADDLVIRL--FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ +H N +L + +DD +++ ++ + GH + ++ F + +LS+ D
Sbjct: 213 VAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADLILSNSED 272
Query: 357 GSLRIWDVILARQIDAI-HVDVSITALSLSPNMDVLATAHVDQNGVYLWV---NRCMFSG 412
S+R+WD+ + H + L+ P++++ A H NG+ ++ R +
Sbjct: 273 KSIRVWDMQKRTSLHVFRHENERFWVLAAHPSLNMFAAGH--DNGMVVFKIQRERPAYCV 330
Query: 413 DSNIDSYASGKEIVSVKMPSVSSVEGCQ 440
N+ Y G++I + + + V C+
Sbjct: 331 SDNLVFYVKGQQIRKLDLTTNKDVALCK 358
Score = 84 (34.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+P + + SGVI +W+ L E HD + + F ++P+ +S D IK+W
Sbjct: 23 RPWVLTSLHSGVIQLWDYRMCVLLEKFDE-HDGPVRGICFHHDQPIFVSGGDDYKIKVWN 81
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+ R + GH F+ I+SA D+ R+++
Sbjct: 82 YK----QKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWN 123
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 146 (56.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 30/112 (26%), Positives = 61/112 (54%)
Query: 295 SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
S+ ++++H + L+ + ++D IR++D R +GHTD + D F GK L S
Sbjct: 110 SITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCS 169
Query: 355 MDGSLRIWDVILARQ-IDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D S+++WD + + I +H D ++++++ P D + +A D+ + +W
Sbjct: 170 ADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRT-IKMW 220
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-G---RDLKSRWEVGCSLVKIVYHRVNG 306
H + V LM+SA I++WDF+ G R LK + S+ + +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTD---SVQDVAFDAQGK 163
Query: 307 LLATVADDLVIRLFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
LLA+ + DL I+L+D + ++ GH ++ F G ++LS+ D ++++W+V
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Score = 120 (47.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R ++T + F L+ S + I IW+ E + ++ H +++ + F A +L
Sbjct: 108 RASITRVIFHPIFA-LMVSASEDATIRIWDFETGEYERSLK-GHTDSVQDVAFDAQGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD SIK+W F + ++ GH + F G ++LSA +DR +++ V
Sbjct: 166 ASCSADLSIKLWDFQQSY---ECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Score = 98 (39.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/104 (25%), Positives = 48/104 (46%)
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
H LA+ + D IR++DV + GH + + F GK+L+S+ D ++R+
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 362 WDVILARQIDAIHVDVSI-TALSLSPNMDVLATAHVDQNGVYLW 404
WD+ R + ++ T++ + + VDQ V +W
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQT-VKVW 408
Score = 97 (39.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V +AF + G+ LLAS ++ I +W+ ++ HD+ + S+ F ++S
Sbjct: 152 SVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLS 210
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
AS D +IKMW + G ++ +GH +R + G + D+ R++
Sbjct: 211 ASRDRTIKMW--EVATG--YCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 75 (31.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 14/65 (21%), Positives = 33/65 (50%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +H L + +DD IR++D+ R ++ H T F + +++S +D +
Sbjct: 345 LAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQT 404
Query: 359 LRIWD 363
+++W+
Sbjct: 405 VKVWE 409
Score = 74 (31.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H +I + F +++SAS D +I++W F+T + + R L+ GH+ + F A G
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYE-RSLK---GHTDSVQDVAFDAQG 162
Query: 105 RHILSAGQDRAFRLFSVIQDQQSRE 129
+ + S D + +L+ QQS E
Sbjct: 163 KLLASCSADLSIKLWDF---QQSYE 184
Score = 55 (24.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H+ V G+A ++SA I+VWD + R +K+ + I +H+ + +
Sbjct: 338 HDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVI 397
Query: 310 TVADDLVIRLFD 321
+ + D +++++
Sbjct: 398 SGSVDQTVKVWE 409
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 111 (44.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLE-KRRLQSVIREAHDNAIISLHFFANEPV 60
+ +VT FS D L+A+G SG++ +W ++ K + S EA D + H PV
Sbjct: 134 KDSVTCAGFSHDST-LVATGDMSGLLKVWQVDTKEEVWSF--EAGDLEWMEWH--PRAPV 188
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++ +AD + MW +GD + + G + P C R +G+ + +D R++
Sbjct: 189 LLAGTADGNTWMW--KVPNGDCKTFQ---GPNCPATCGRVLPDGKRAVVGYEDGTIRIWD 243
Query: 121 VIQ 123
+ Q
Sbjct: 244 LKQ 246
Score = 108 (43.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 213 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 272
C V T G + F ++ S+ S L E S +++ E +G C S L + GY
Sbjct: 282 CQAKLVSATTGKVVGVFRPETVASQPS-LGEGEESE-SNSVESLGF-C-SVMPLA-AVGY 336
Query: 273 -HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 331
G + ++D + L+ + + +V++++ ++ T + D ++RL+D R++ +
Sbjct: 337 LDGTLAIYDLATQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDY 396
Query: 332 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
GHT I DF S+D ++++ D +++ V
Sbjct: 397 RGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 429
Score = 67 (28.6 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 67 DNSIKMWIFDTTDGDP-RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
D +I++W D G P +L+ GH P C+ +G IL+ D +L S
Sbjct: 236 DGTIRIW--DLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQAKLVS 288
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 111 (44.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLE-KRRLQSVIREAHDNAIISLHFFANEPV 60
+ +VT FS D L+A+G SG++ +W ++ K + S EA D + H PV
Sbjct: 134 KDSVTCAGFSHDST-LVATGDMSGLLKVWQVDTKEEVWSF--EAGDLEWMEWH--PRAPV 188
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++ +AD + MW +GD + + G + P C R +G+ + +D R++
Sbjct: 189 LLAGTADGNTWMW--KVPNGDCKTFQ---GPNCPATCGRVLPDGKRAVVGYEDGTIRIWD 243
Query: 121 VIQ 123
+ Q
Sbjct: 244 LKQ 246
Score = 108 (43.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 213 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 272
C V T G + F ++ S+ S L E S +++ E +G C S L + GY
Sbjct: 282 CQAKLVSATTGKVVGVFRPETVASQPS-LGEGEESE-SNSVESLGF-C-SVMPLA-AVGY 336
Query: 273 -HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 331
G + ++D + L+ + + +V++++ ++ T + D ++RL+D R++ +
Sbjct: 337 LDGTLAIYDLATQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDY 396
Query: 332 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
GHT I DF S+D ++++ D +++ V
Sbjct: 397 RGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 429
Score = 67 (28.6 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 67 DNSIKMWIFDTTDGDP-RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
D +I++W D G P +L+ GH P C+ +G IL+ D +L S
Sbjct: 236 DGTIRIW--DLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVS 288
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 117 (46.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS----RWEVGCSLVKIVYHRVNG 306
H V VA ++SA + IK+WD GRD K R V S+ ++ +
Sbjct: 401 HQKLVNHVAFSPDGRYIVSASFDNSIKLWD--GRDGKFISTFRGHVA-SVYQVAWSSDCR 457
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
LL + + D ++++DV ++ GH D + +S DGK + S G D +R+W
Sbjct: 458 LLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 103 (41.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL-----HFF--AN 57
V +++S DG+ ++A+G+ I +W+ + + H I SL H +
Sbjct: 189 VLCVSWSPDGE-VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGS 247
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFR-SGHSAPPLCIRFYANGRHILSAGQDRAF 116
+P L S+S D +IK+W DT R+ ++ SGH+ C+++ G + S DR
Sbjct: 248 KPRLASSSKDGTIKIW--DTVS---RVCQYTMSGHTNSVSCVKWGGQGL-LYSGSHDRTV 301
Query: 117 RLFSV 121
R++ +
Sbjct: 302 RVWDI 306
Score = 98 (39.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 26/108 (24%), Positives = 54/108 (50%)
Query: 264 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV---NG----LLATVADDLV 316
N L +S Y I +D G+ + E ++ Y ++ NG ++ T +DD
Sbjct: 324 NHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALEN-YEKICKKNGNSEEMMVTASDDYT 382
Query: 317 IRLFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ L++ + + + + + GH + FS DG++++S+ D S+++WD
Sbjct: 383 MFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWD 430
Score = 80 (33.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 262 STNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVIRL 319
++ +M++A + +W+ K +R LV V +G + + + D I+L
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKL 428
Query: 320 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+D + + F GH + +S D + L+S D +L++WDV
Sbjct: 429 WDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDV 473
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 9 AFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADN 68
AF+ + +GA IW+ + + ++ H N ++ + + + V+ + S DN
Sbjct: 150 AFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLK-GHYNWVLCVSWSPDGEVIATGSMDN 208
Query: 69 SIKMW 73
+I++W
Sbjct: 209 TIRLW 213
Score = 60 (26.2 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 36 RLQSVIREAHDNAIISLHFFANEPVLMSASA-DNSIKMWIFDTTDGDPRLLRFRSGHSAP 94
R S I H + I+ F + M A DN+ ++W DT P + GH
Sbjct: 134 RSSSAIA-GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQT--P--MHTLKGHYNW 188
Query: 95 PLCIRFYANGRHILSAGQDRAFRLF 119
LC+ + +G I + D RL+
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLW 213
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
GQ LL SG+ + +W++ + I ++H H+ N +S S D ++++
Sbjct: 288 GQGLLYSGSHDRTVRVWDINSQGRCINILKSH------AHW-VNH---LSLSTDYALRIG 337
Query: 74 IFDTTDGDP 82
FD T P
Sbjct: 338 AFDHTGKKP 346
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 111 (44.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLE-KRRLQSVIREAHDNAIISLHFFANEPV 60
+ +VT FS D L+A+G SG++ +W ++ K + S EA D + H PV
Sbjct: 135 KDSVTCAGFSHDST-LVATGDMSGLLKVWQVDTKEEVWSF--EAGDLEWMEWH--PRAPV 189
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++ +AD + MW +GD + + G + P C R +G+ + +D R++
Sbjct: 190 LLAGTADGNTWMW--KVPNGDCKTFQ---GPNCPATCGRVLPDGKRAVVGYEDGTIRIWD 244
Query: 121 VIQ 123
+ Q
Sbjct: 245 LKQ 247
Score = 107 (42.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 22/99 (22%), Positives = 53/99 (53%)
Query: 267 MISAGY-HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
+ + GY G + ++D + L+ + + +V++++ ++ T + D ++RL+D
Sbjct: 332 LAAVGYLDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTG 391
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
R++ + GHT I DF S+D ++++ D +++ V
Sbjct: 392 RLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 430
Score = 66 (28.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 67 DNSIKMWIFDTTDGDP-RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
D +I++W D G P +L+ GH P C+ +G IL+ D +L S
Sbjct: 237 DGTIRIW--DLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAQLVS 289
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 182 (69.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 52/190 (27%), Positives = 91/190 (47%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVY---H 302
+S AH V+ + D TNTL+ + G G +KVWD G + + ++ + H
Sbjct: 97 KSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKH 156
Query: 303 RVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ +LA+ ADD +RL+D+ + R + FEGH+ I F G +LLS D ++++W
Sbjct: 157 QNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Query: 363 DVILARQIDAIHVDVSITALSL---SPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS- 418
++ + I V S+ A+ P +L TA + N + W + D +D+
Sbjct: 217 NIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAG-EGNLILAWDWKSGSRLDPGVDTT 275
Query: 419 YASGKEIVSV 428
++ I+ V
Sbjct: 276 HSETNAIIQV 285
Score = 132 (51.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 255 VVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVAD 313
V +A S + +I+A + +++ GR +KS ++ + N LLAT
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 314 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSE-DGKWLLSSGMDGS-LRIWDVILARQID 371
+ +++++D+ + F GH I+ CF + W+L+SG D S +R+WD+ +R +
Sbjct: 124 EGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMA 183
Query: 372 AI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
H V I L+ P L + D+ V +W
Sbjct: 184 VFEGHSSV-IRGLTFEPTGSFLLSGSRDKT-VQVW 216
Score = 123 (48.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 40/180 (22%), Positives = 79/180 (43%)
Query: 193 HILRPCPENPTAVKACTISACG--NFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYA 250
H+ + TAV + G F + ++RFNL S +++ + + + + A
Sbjct: 404 HVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKA 463
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS------RWEVGCSLVKIVYHRV 304
H+ +V + ++ SA IK+WD ++ R CS ++
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACS-----FNPF 518
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ LA+ + D IR+++V + V+ EGHT I + G ++S+ DG +++W +
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL 578
Score = 112 (44.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV 297
GS LD + ++ ++ V S NTL+ H D+ + L+ R G +
Sbjct: 265 GSRLDPGVDTTHSETNAIIQVVPFSENTLL---SVHSDLSLL------LRKRVP-GEGFI 314
Query: 298 KIVYHRVNGLL------ATVADD-LVI----RLFDVVALRMVRKF---EGHTDRITDFCF 343
I ++NG A + DD L + DV++ + F EGHTD +
Sbjct: 315 TI--KKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDS 372
Query: 344 SEDGKWLLSSGMDGSLRIWDVILARQI-DAIHV----DVSITALSLSPNMDV 390
SEDG WL + D ++R+W++ + + IHV S+TA++L P +DV
Sbjct: 373 SEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGP-LDV 423
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF--FANEPVLMSASADNSIKMWI 74
LLA+G + G++ +W++ + R H I +L F N VL S + D+ +++W
Sbjct: 117 LLATGGAEGLVKVWDIAGAYVTHSFR-GHGGVISALCFGKHQNTWVLASGADDSRVRLWD 175
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 134
+++ R + GHS+ + F G +LS +D+ +++++ + R + H
Sbjct: 176 LNSS----RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFH 231
Score = 100 (40.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 3 GAVTALAFSSDGQP-LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G ++AL F +LASGA + +W+L R +V E H + I L F L
Sbjct: 146 GVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVF-EGHSSVIRGLTFEPTGSFL 204
Query: 62 MSASADNSIKMW 73
+S S D ++++W
Sbjct: 205 LSGSRDKTVQVW 216
Score = 97 (39.2 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPVLMS 63
VTALA +SD + L+A+ S +++I+ + RR++S+ +AH+ +I++ +L +
Sbjct: 64 VTALAITSDSKKLIAAFRSR-LLTIYEIPSGRRIKSM--KAHETPVITMTIDPTNTLLAT 120
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSA--PPLCIRFYANGRHILSAGQDRAFRLFSV 121
A+ +K+W D G FR GH LC + N + S D RL+
Sbjct: 121 GGAEGLVKVW--DIA-GAYVTHSFR-GHGGVISALCFGKHQNTWVLASGADDSRVRLWD- 175
Query: 122 IQDQQSRELSQRH 134
+ +S + + H
Sbjct: 176 LNSSRSMAVFEGH 188
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/139 (24%), Positives = 66/139 (47%)
Query: 253 GEVVGV---------ACD-STNTLMISAGYHGD--IKVWDFKGRDLKSRWE--VGCSLVK 298
GEVVGV AC + + +++G GD I++W+ + E G +++K
Sbjct: 497 GEVVGVLRGHRRGVWACSFNPFSRQLASG-SGDRTIRIWNVDTQQCVQTLEGHTG-AILK 554
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
++Y + + A D +++++ + + V + H DR+ DG L+S G D
Sbjct: 555 LIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAV 614
Query: 359 LRIW-DVI---LARQIDAI 373
+ +W DV +A+Q + +
Sbjct: 615 VSVWKDVTEEYIAKQAEEL 633
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD-NAIISLHFFANEPVLMS 63
+ L F G LL SG+ + +WN++KR I H AI ++ E +L +
Sbjct: 192 IRGLTFEPTGSFLL-SGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYT 250
Query: 64 ASADNSIKMW 73
A N I W
Sbjct: 251 AGEGNLILAW 260
Score = 37 (18.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 16/91 (17%), Positives = 39/91 (42%)
Query: 33 EKRR--LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG 90
EK+R L+ I + ++ F +NE +L++A D I ++ RL +
Sbjct: 6 EKKRFELEKSIEPIYTGGPVA--FDSNEKILVTALTDRIIGT----RSETGERLFSIKKD 59
Query: 91 HSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ ++ + +++A + R ++ +
Sbjct: 60 EDDYVTALAITSDSKKLIAAFRSRLLTIYEI 90
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 131 (51.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 55/238 (23%), Positives = 103/238 (43%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
V T MDT A +W +++ GE + + C + G+ V G+ +
Sbjct: 192 VATGSMDTT-AKLWDVES---GEEVSTLAGHFAEIISLC-FNTTGDRLVTGSFDHTAILW 246
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD-LKS 288
++ SG R ++ +S H GE+ V + +L+ +A KVWD +G L +
Sbjct: 247 DVPSG--RKVHV-LS-----GHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLAT 298
Query: 289 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
++ + ++ L+AT + D R+F + + + EGH I+ CF+ G
Sbjct: 299 LLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGS 358
Query: 349 WLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+L++ +D + R+W V + + H D I + + + D + T D N +W
Sbjct: 359 RVLTASVDKTSRVWCVKTGACLQVLEGHSD-EIFSCAFNYEGDTIITGSKD-NTCRIW 414
Score = 85 (35.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 32/137 (23%), Positives = 60/137 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPV--- 60
+T +AF+ G + +G+ IW+ L ++ E H N + ++ F N P
Sbjct: 95 LTNVAFNKSGSCFI-TGSYDRTCKIWDTASGEELHTL--EGHRNVVYAIAF--NNPYGDK 149
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+ + S D + K+W +T FR GH+A +C+ F + + D +L+
Sbjct: 150 VATGSFDKTCKLWSAET---GKCFYTFR-GHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 121 VIQDQQSRELSQRHVAK 137
V ++ L+ H A+
Sbjct: 206 VESGEEVSTLAG-HFAE 221
Score = 51 (23.0 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY- 101
+AH + ++ F + ++ S D + K+W DT G+ L GH I F
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIW--DTASGEE--LHTLEGHRNVVYAIAFNN 144
Query: 102 ANGRHILSAGQDRAFRLFS 120
G + + D+ +L+S
Sbjct: 145 PYGDKVATGSFDKTCKLWS 163
Score = 42 (19.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 21/92 (22%), Positives = 38/92 (41%)
Query: 52 LHFFANEPVLMSASADNSIKMWIFDTTD--G--DPR---LLRFRSGHSAPPLCIRFYANG 104
L A EP++ S+ + +K+ I + G D R L R H P + F +G
Sbjct: 46 LEIRAAEPLITSSCVEQ-VKLLICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSG 104
Query: 105 RHILSAGQDRAFRLFSVIQDQQSRELS-QRHV 135
++ DR +++ ++ L R+V
Sbjct: 105 SCFITGSYDRTCKIWDTASGEELHTLEGHRNV 136
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 174 (66.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 80/330 (24%), Positives = 140/330 (42%)
Query: 84 LLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ--QSRELSQRHVAKRARX 141
L R +GH I + ++ R +L+A +D R++S+ + + LS RA
Sbjct: 143 LHRDLAGHFDEVQHIEWSSDSRFLLTASKDLTARVWSLDPEDGFEPTTLSGHRQGVRAAF 202
Query: 142 XXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYV---WRLQNFVLGEHILRPC 198
++ DCA R W V DT + WR+ V + +P
Sbjct: 203 FSADQESIYT---VSRDCALFR---WEYVSKKDPDTMEDVAEPRWRI---VKKDFFQQP- 252
Query: 199 PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGV 258
+ T VK A N V+G + G + L + L +S+ SN +VV +
Sbjct: 253 --HAT-VKCAAFHAASNLLVVGFSNGLFGLYELPE-FNTIHLLSISQ-SNI----DVVSI 303
Query: 259 ACDSTNTLMISAGYHGDIKVWDFKGRD--LKSRWEVGCSLVKIVYHRVNGLLATVADDLV 316
+ L + G + VW+++ LK + + S+ + Y + T ADD
Sbjct: 304 N-KTGEWLAFGSSKFGQLLVWEWQSESYILKQQGHLD-SMNALAYSPDGQRIVTAADDGK 361
Query: 317 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD 376
I+++DV + + F HT +T FS+ G L +S +DGS+R WD+I R
Sbjct: 362 IKVWDVKSGFCLVTFTEHTSGVTACQFSKKGNVLFTSSLDGSVRAWDLIRYRNFRTFTAP 421
Query: 377 --VSITALSLSPNMDVLATAHVDQNGVYLW 404
+S ++L++ P+ +V+ D +++W
Sbjct: 422 SRLSFSSLAVDPSGEVICAGSPDSFDIHVW 451
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 146 (56.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/126 (30%), Positives = 63/126 (50%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRV 304
RS H G V+G+AC ++ L+ +AG + VWD G + +V I++H
Sbjct: 96 RSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Query: 305 NG--LLATVADDLVIRLFDVVALRMVRK----FEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +L + +DD +R++D+ A +K E H +T SEDG L S+G D
Sbjct: 156 SNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKV 215
Query: 359 LRIWDV 364
+ +WD+
Sbjct: 216 VNLWDL 221
Score = 121 (47.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 46/199 (23%), Positives = 89/199 (44%)
Query: 215 NFAVLGTAGGWIERFNLQSGISRGSY--LDMSERSNYA-HNGEVVGVACDSTNTLMISAG 271
+F V G+ ++ ++L GIS S +++ RS A H+ ++ VA ++L+ +
Sbjct: 460 SFFVSGSGDRTLKVWSLD-GISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGS 518
Query: 272 YHGDIKVWDFKGR----DLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRM 327
+W LK + + + V+ + T + D ++++ +
Sbjct: 519 EDRTASIWRLPDLVHVVTLKGHKR---RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSC 575
Query: 328 VRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLS 385
++ FEGHT + F DG +S G DG L++W+V + I H D + AL++
Sbjct: 576 LKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHED-KVWALAVG 634
Query: 386 PNMDVLATAHVDQNGVYLW 404
+++AT D + LW
Sbjct: 635 KKTEMIATGGGDAV-INLW 652
Score = 104 (41.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 28/121 (23%), Positives = 57/121 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF--ANEPV 60
G V +A + G L +GA V+ +W+++ R H + S+ F +N+ +
Sbjct: 103 GPVMGMACHASGGLLATAGADRKVL-VWDVDGGFCTHYFR-GHKGVVSSILFHPDSNKNI 160
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L+S S D ++++W + + + + L H + I +G + SAG+D+ L+
Sbjct: 161 LISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Query: 121 V 121
+
Sbjct: 221 L 221
Score = 99 (39.9 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR--EAHDNAIISLHFFANEPVLM 62
+TALA S D + LL S S I +W+LE + IR + H+ ++ + A+ +L
Sbjct: 63 LTALALSPDDK-LLFSAGHSRQIRVWDLETLKC---IRSWKGHEGPVMGMACHASGGLLA 118
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG-RHILSAGQDRA 115
+A AD + +W DG FR GH I F+ + ++IL +G D A
Sbjct: 119 TAGADRKVLVW---DVDGGFCTHYFR-GHKGVVSSILFHPDSNKNILISGSDDA 168
Score = 92 (37.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 11 SSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
SSDG +A A VI+I + ++S I E + + +L ++ +L SA I
Sbjct: 28 SSDGS-FIAC-ACGDVINIVDSTDSSVKSTI-EGESDTLTALALSPDDKLLFSAGHSRQI 84
Query: 71 KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++W +T + +R GH P + + +A+G + +AG DR ++ V
Sbjct: 85 RVWDLETL----KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV 131
Score = 82 (33.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 251 HNGEVVGVA-CDSTNTLMISAGYHGDIKVWDFKG--RD------LKSRWEVGC---SLVK 298
HNG+++ VA + + +S +KVW G D LK+R V +
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ R + L+ T ++D ++ + L V +GH RI FS + ++++ D +
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKT 564
Query: 359 LRIWDV 364
++IW +
Sbjct: 565 VKIWAI 570
Score = 67 (28.6 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 28/127 (22%), Positives = 54/127 (42%)
Query: 291 EVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDG-KW 349
EV SL V N L+ T + D +RL++ + + GH I F++ +
Sbjct: 402 EVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSF 461
Query: 350 LLSSGMDGSLRIWDV------------ILARQIDAIHVDVSITALSLSPNMDVLATAHVD 397
+S D +L++W + + R + A H D I +++++ N ++ T D
Sbjct: 462 FVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAH-DKDINSVAVARNDSLVCTGSED 520
Query: 398 QNGVYLW 404
+ +W
Sbjct: 521 RTAS-IW 526
Score = 46 (21.3 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 261 DSTNTLMISAGYHGDIKVWDFKG 283
DS T I+ G G +++W +G
Sbjct: 266 DSQATYFITVGERGVVRIWKSEG 288
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 47/163 (28%), Positives = 72/163 (44%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-G---RDLKSRWEVGCSLVKIVYHRVN 305
+H V VA T + S IK+WD++ G R LK G S + + N
Sbjct: 112 SHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIR-GVSGLDYGGQKGN 170
Query: 306 GLLATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCF-SEDGKWLLSSGMDGSLRIWD 363
LLA+ + DL I+L+D +R GH ++ F + + L+S+ DG+LRIWD
Sbjct: 171 TLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD 230
Query: 364 VILARQIDAIHVDVSITALSLSPNMDV--LATAHVDQNGVYLW 404
V + I +SP+ D L + DQ + +W
Sbjct: 231 VSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQ-AITVW 272
Score = 123 (48.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 38/123 (30%), Positives = 61/123 (49%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE--P 59
R AVT +AF L ASG+ I IW+ E ++ ++ H + L + +
Sbjct: 114 RDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLK-GHIRGVSGLDYGGQKGNT 171
Query: 60 VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAFRL 118
+L S S+D +IK+W D + D +R SGH +RF +N H++SA +D R+
Sbjct: 172 LLASCSSDLTIKLW--DPSK-DYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRI 228
Query: 119 FSV 121
+ V
Sbjct: 229 WDV 231
Score = 102 (41.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 33/124 (26%), Positives = 65/124 (52%)
Query: 1 MRGAVTALAFSSD-GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF-ANE 58
+RG V+ L + G LLAS +S I +W+ K HD+++ S+ F +N+
Sbjct: 156 IRG-VSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSND 214
Query: 59 PVLMSASADNSIKMWIFDTTDGD-PRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
L+SAS D ++++W D + G ++++ + + F +G+ ++S G+D+A
Sbjct: 215 NHLISASRDGTLRIW--DVSTGFCVKVIKSATESWIRDVSPSF--DGKWLVSGGRDQAIT 270
Query: 118 LFSV 121
++ V
Sbjct: 271 VWEV 274
Score = 94 (38.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI-- 365
+AT A D I+L++ R+++ GH + + F GK+L S D ++R WD+
Sbjct: 323 VATGARDKTIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQE 381
Query: 366 --LARQIDAIHVD-VSITALSLSPNMD 389
L + I H VS + SPN D
Sbjct: 382 GRLVKTISGAHEHFVSCIRWAPSPNTD 408
Score = 64 (27.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 276 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL-RMVRKFEG 333
IK+W+ +GR +K+ + +V+H L +V+DD IR +D+ R+V+ G
Sbjct: 332 IKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISG 390
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 47/163 (28%), Positives = 72/163 (44%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-G---RDLKSRWEVGCSLVKIVYHRVN 305
+H V VA T + S IK+WD++ G R LK G S + + N
Sbjct: 112 SHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIR-GVSGLDYGGQKGN 170
Query: 306 GLLATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCF-SEDGKWLLSSGMDGSLRIWD 363
LLA+ + DL I+L+D +R GH ++ F + + L+S+ DG+LRIWD
Sbjct: 171 TLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD 230
Query: 364 VILARQIDAIHVDVSITALSLSPNMDV--LATAHVDQNGVYLW 404
V + I +SP+ D L + DQ + +W
Sbjct: 231 VSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQ-AITVW 272
Score = 123 (48.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 38/123 (30%), Positives = 61/123 (49%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE--P 59
R AVT +AF L ASG+ I IW+ E ++ ++ H + L + +
Sbjct: 114 RDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLK-GHIRGVSGLDYGGQKGNT 171
Query: 60 VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAFRL 118
+L S S+D +IK+W D + D +R SGH +RF +N H++SA +D R+
Sbjct: 172 LLASCSSDLTIKLW--DPSK-DYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRI 228
Query: 119 FSV 121
+ V
Sbjct: 229 WDV 231
Score = 102 (41.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 33/124 (26%), Positives = 65/124 (52%)
Query: 1 MRGAVTALAFSSD-GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF-ANE 58
+RG V+ L + G LLAS +S I +W+ K HD+++ S+ F +N+
Sbjct: 156 IRG-VSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSND 214
Query: 59 PVLMSASADNSIKMWIFDTTDGD-PRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
L+SAS D ++++W D + G ++++ + + F +G+ ++S G+D+A
Sbjct: 215 NHLISASRDGTLRIW--DVSTGFCVKVIKSATESWIRDVSPSF--DGKWLVSGGRDQAIT 270
Query: 118 LFSV 121
++ V
Sbjct: 271 VWEV 274
Score = 94 (38.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI-- 365
+AT A D I+L++ R+++ GH + + F GK+L S D ++R WD+
Sbjct: 323 VATGARDKTIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQE 381
Query: 366 --LARQIDAIHVD-VSITALSLSPNMD 389
L + I H VS + SPN D
Sbjct: 382 GRLVKTISGAHEHFVSCIRWAPSPNTD 408
Score = 64 (27.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 276 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL-RMVRKFEG 333
IK+W+ +GR +K+ + +V+H L +V+DD IR +D+ R+V+ G
Sbjct: 332 IKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISG 390
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/204 (22%), Positives = 86/204 (42%)
Query: 210 ISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMIS 269
+S+ GN+A+ +G W + L ++ G + R H +V+ VA + N ++S
Sbjct: 72 LSSDGNYAL---SGSWDQTLRLWD-LAAGK----TTRRFEGHTKDVLSVAFSADNRQIVS 123
Query: 270 AGYHGDIKVWDFKGRDLKSRWEVG----CSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 325
IK+W+ + E G S V+ + N ++ + D ++++++
Sbjct: 124 GSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANC 183
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI-HVDVSITALSL 384
++ GH + S DG S G D +WD+ + + + H D+ I AL
Sbjct: 184 KLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDI-INALCF 242
Query: 385 SPNMDVLATAHVDQNGVYLWVNRC 408
SPN L A+ + +W C
Sbjct: 243 SPNRYWLCVAYGPS--IKIWDLAC 264
Score = 113 (44.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 32/119 (26%), Positives = 59/119 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ + SSDG L SG+ + +W+L + E H ++S+ F A+ ++S
Sbjct: 67 ISDVVLSSDGNYAL-SGSWDQTLRLWDLAAGKTTRRF-EGHTKDVLSVAFSADNRQIVSG 124
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH--ILSAGQDRAFRLFSV 121
S D +IK+W T + + GH+ C+RF N + I+S G DR +++++
Sbjct: 125 SRDKTIKLW---NTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNL 180
Score = 99 (39.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 263 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVAD-DLVIRLFD 321
+N +++S G+ +KVW+ LK+ + V +G L T D L+D
Sbjct: 162 SNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWD 221
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV-SIT 380
+ + + E H D I CFS + WL + S++IWD+ + ++ + +V S T
Sbjct: 222 LNDGKNLYTLE-HNDIINALCFSPNRYWLCVA-YGPSIKIWDLACKKTVEELRPEVVSPT 279
Query: 381 ALSLSPNMDVLA 392
+ + P LA
Sbjct: 280 SKADQPQCLSLA 291
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/127 (21%), Positives = 54/127 (42%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-----LQSVIREAHDNAIISLHFFAN 57
G VT +A + + S + + +W L + H + I + ++
Sbjct: 16 GWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSD 75
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+S S D ++++W D G RF GH+ L + F A+ R I+S +D+ +
Sbjct: 76 GNYALSGSWDQTLRLW--DLAAGKTTR-RFE-GHTKDVLSVAFSADNRQIVSGSRDKTIK 131
Query: 118 LFSVIQD 124
L++ + +
Sbjct: 132 LWNTLAE 138
Score = 66 (28.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 27/130 (20%), Positives = 53/130 (40%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHR 303
+ +++ HNG + V +L S G +WD G++L + E ++ +
Sbjct: 186 KNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTL-EHN-DIINALCFS 243
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFE-------GHTDR--ITDFCFSEDGKWLLSSG 354
N VA I+++D+ + V + D+ +S DG+ L +
Sbjct: 244 PNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGY 303
Query: 355 MDGSLRIWDV 364
D ++R+W V
Sbjct: 304 SDNTIRVWQV 313
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 151 (58.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 33/140 (23%), Positives = 67/140 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 66 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 125
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 126 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 185
Query: 370 IDAI--HVDVSITALSLSPN 387
+ H + + PN
Sbjct: 186 MSEFPGHTG-PVNVVEFHPN 204
Score = 131 (51.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+ L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 79 EELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWD 137
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 129
G + R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 138 I-RRKGC--VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 188
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 128 (50.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 40/139 (28%), Positives = 61/139 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 307
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSL 227
Query: 368 RQIDAIHVDVSITALSLSP 386
+ + V S+ A L P
Sbjct: 228 QATRTVPVFESVEAAVLLP 246
Score = 124 (48.7 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 233 SGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV 292
+G G ++ + + H+ ++ VA + L+ + K+W L +
Sbjct: 460 TGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSG 519
Query: 293 GC-SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLL 351
L + + ++ +LAT + D I+L+ + ++ FEGH + F G LL
Sbjct: 520 HRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLL 579
Query: 352 SSGMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
SSG DG L++W + R +DA H D + L S +D A + V LW
Sbjct: 580 SSGSDGLLKLWTIKNNECVRTLDA-HED-KVWGLHCS-RLDDRALTGASDSRVVLW 632
Score = 112 (44.5 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 47/187 (25%), Positives = 89/187 (47%)
Query: 268 ISAGYHGDIKVWDF-KGRDLKSRWEV---GCSLVKIVYHRVNGLLATVADDLVIRLFDVV 323
++AG G ++VW+ GR + ++ + G L GLL +V D + L+D
Sbjct: 263 LTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAR 322
Query: 324 ALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSIT 380
+LR+ ++F G+++ + D F ED +++S L+++D+ A QI H D+ +
Sbjct: 323 SLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSP-CLKVFDLQTSACQILHGHTDI-VL 380
Query: 381 ALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSVKMPSVS 434
AL + + A+ DQ+ + +W +N+ C+ G + S + I ++
Sbjct: 381 ALDVFRKGRLFASCAKDQS-IRVWRMNKSGEVACVAQGSGHTHSVGT---ICCSRLKETF 436
Query: 435 SVEGCQD 441
V G QD
Sbjct: 437 LVTGSQD 443
Score = 104 (41.7 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 3 GAVTALAFSSD-GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G V +AF D + LL S A+ I +W+L++R +V+ AH +A+ SL F A+ +
Sbjct: 152 GVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLT-AHYSAVTSLTFSADGHTM 210
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSA--------PPLCIRFYANGRHILSAGQD 113
+S+ D +W + + F S +A P L ++ + G H L+AG
Sbjct: 211 LSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVK--SAGLHFLTAGDQ 268
Query: 114 RAFRLF 119
A R++
Sbjct: 269 GALRVW 274
Score = 94 (38.1 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 61
V +AF LLA+G G + +W++ R ++ L F +P +L
Sbjct: 112 VATMAFDPTST-LLATGGCDGAVRVWDVV--RCYGTHHFRGSPGVVHLVAFHPDPARLLL 168
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S++AD SI++W + L + H + + F A+G +LS+G+D+ ++ +
Sbjct: 169 FSSAADTSIRVWSLQ----ERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDL 224
Query: 122 IQDQQSR 128
Q +R
Sbjct: 225 RSLQATR 231
Score = 65 (27.9 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 13 DGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKM 72
D ++AS +S + +++L+ Q I H + +++L F + S + D SI++
Sbjct: 347 DSHVVVAS--NSPCLKVFDLQTSACQ--ILHGHTDIVLALDVFRKGRLFASCAKDQSIRV 402
Query: 73 WIFDTTDGDPRLLRFRSGHS 92
W + + G+ + SGH+
Sbjct: 403 WRMNKS-GEVACVAQGSGHT 421
Score = 58 (25.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 23/132 (17%), Positives = 58/132 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+TA S D + +L + + + +++ W ++ + + + H + ++ F +L +
Sbjct: 69 ITAFDLSPDDK-VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATG 127
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 122
D ++++W G FR L + F+ + +L S+ D + R++S +
Sbjct: 128 GCDGAVRVWDVVRCYGTHH---FRGSPGVVHL-VAFHPDPARLLLFSSAADTSIRVWS-L 182
Query: 123 QDQQSRELSQRH 134
Q++ + H
Sbjct: 183 QERSCLAVLTAH 194
Score = 54 (24.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 24/101 (23%), Positives = 44/101 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA--HDNAIISLHFFA-NEPVL 61
V AL G+ L AS A I +W + K + + + H +++ ++ E L
Sbjct: 379 VLALDVFRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFL 437
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
++ S D ++K+W LL +GH P+ ++ A
Sbjct: 438 VTGSQDCTVKLWPLPEA-----LLSKGTGHEGGPVFLQAQA 473
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 376 DVSITALSLSPNMDVLATAHVDQNGVYLW-VNRCMFSG 412
D I +++++PN +LAT D+ LW + RC G
Sbjct: 479 DKDINSVAVAPNDKLLATGSQDRTAK-LWALPRCQLLG 515
Score = 52 (23.4 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 21/103 (20%), Positives = 44/103 (42%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
LL S + + +++ RL+ + ++ + F E + A NS + +FD
Sbjct: 306 LLLSVTADHNLLLYDARSLRLRKQFA-GYSEEVLDVRFLGPEDSHVVV-ASNSPCLKVFD 363
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
++L GH+ L + + GR S +D++ R++
Sbjct: 364 LQTSACQILH---GHTDIVLALDVFRKGRLFASCAKDQSIRVW 403
Score = 38 (18.4 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 589 IIDHDDHQELDKRPEYLSIELLLDYLIHE 617
+ + + +E KR E + + LD L+HE
Sbjct: 635 VTEAEQAEEQAKREEQVVKQQELDNLLHE 663
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 111 (44.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS----RWEVGCSLVKIVYHRVNG 306
H EV V + SAG+ +K+W+ GRD K R VG ++ + + +
Sbjct: 404 HQKEVNHVTFSPDMAYIASAGFDNHVKLWN--GRDGKFITTLRGHVG-AVYQCCFSADSR 460
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
LL + + D +++++V ++ GH D + +S DG+ + S G D ++RIW
Sbjct: 461 LLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 107 (42.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 32/122 (26%), Positives = 61/122 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL-----HFF-ANE 58
V A+++S +G ++A+G+ + IW+ +K + + H I SL H +
Sbjct: 194 VLAVSYSPNGA-MIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGH 252
Query: 59 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 118
P L SAS D+++++W + D L SGH C+R+ G+ I ++ DR ++
Sbjct: 253 PRLASASKDSTVRIWDVISKRADIVL----SGHKGSVTCVRWGGTGK-IYTSSHDRTIKV 307
Query: 119 FS 120
++
Sbjct: 308 WN 309
Score = 95 (38.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 24/101 (23%), Positives = 50/101 (49%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+A+ D ++L++ + + GH + CFS D + L+SS D +L++W+V
Sbjct: 420 IASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTG 479
Query: 368 RQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVN 406
+ + + H D + A+ SP+ + + D+ + +W N
Sbjct: 480 KLSEDLPGHKD-EVFAVDWSPDGQKVGSGGKDK-AIRIWRN 518
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYH---GDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVN 305
AH V +A ST+ ++ +A YH G + D K K R+E ++ + +
Sbjct: 321 AHAHRVNHLAL-STDFILRTA-YHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEK-- 376
Query: 306 GLLATVADDLVIRLFDVVAL-RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
L + +DD + L+D + + V + GH + FS D ++ S+G D +++W+
Sbjct: 377 --LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWN 433
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 405 VNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVP 456
V +C FS DS + +S K+ ++K+ +V + + +D + +V D P
Sbjct: 450 VYQCCFSADSRL-LVSSSKD-TTLKVWNVRTGKLSEDLPGHKDEVFAVDWSP 499
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 109 (43.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 36/147 (24%), Positives = 67/147 (45%)
Query: 264 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG----LLATVADDLVIRL 319
N+L +S Y +D GR E +L + Y++ G L + +DD + L
Sbjct: 286 NSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALER--YNKTKGDSPERLVSGSDDFTMFL 343
Query: 320 FDV-VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 378
++ V+ + ++ GH + FS DGKW+ S+ D S+R+W+ I + + V
Sbjct: 344 WEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVG 403
Query: 379 -ITALSLSPNMDVLATAHVDQNGVYLW 404
+ +S S + +L + D + +W
Sbjct: 404 PVYQVSWSADSRLLLSGSKDST-LKIW 429
Score = 108 (43.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 37/134 (27%), Positives = 65/134 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V +A+S DG+ L+ SG+ SG I WN +K L+ H I + + EPV +S+
Sbjct: 154 VLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELEGSPLTGHKKWITGISW---EPVHLSS 209
Query: 65 SADNSIKMWIFDTTDGDPRL--LRFR------SGHSAPPLCIRFYANGRHILSAGQDRAF 116
+ ++ + DGD R+ + + SGH+ C+++ +G I + QD
Sbjct: 210 PC----RRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTI 264
Query: 117 RLFSVIQDQQSREL 130
+++ Q + REL
Sbjct: 265 KMWETTQGKLIREL 278
Score = 103 (41.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 296 LVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
LV VY +G +A+ + D +RL++ + + V F GH + +S D + LLS
Sbjct: 362 LVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGS 421
Query: 355 MDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D +L+IW++ + + H D + A+ SP+ + + + D+ + LW
Sbjct: 422 KDSTLKIWEIRTKKLKQDLPGHAD-EVFAVDWSPDGEKVVSGGKDRV-LKLW 471
Score = 70 (29.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++FS DG+ L ASG+ + +W+L + H N ++++ + + L+S
Sbjct: 111 AVLCVSFSPDGKQL-ASGSGDTTVRLWDLYTETPLFTCK-GHKNWVLTVAWSPDGKHLVS 168
Query: 64 ASADNSIKMW 73
S I W
Sbjct: 169 GSKSGEICCW 178
Score = 63 (27.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A++ + F + L S S D ++++W D P L GH L + + +G
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLW--DLYTETP--LFTCKGHKNWVLTVAWSPDG 163
Query: 105 RHILSAGQ 112
+H++S +
Sbjct: 164 KHLVSGSK 171
Score = 57 (25.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+GH+ LC+ F +G+ + S D RL+ +
Sbjct: 106 AGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 145 (56.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 37/117 (31%), Positives = 61/117 (52%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR-VNGL- 307
H+ V ++ D T+TL+ + G G IK+WD + + +V +V +H ++ L
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 164
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
L + + D IR++D+ + R V E H +T FS DG L+SSG D +WD+
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDL 221
Score = 140 (54.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
S LLASG+ +W L RL V R H + S+ F + +L SASAD S++
Sbjct: 493 SPNDKLLASGSQDRTAKLWALSDLRLLGVCR-GHRRGVWSVQFSPVDQILGSASADGSVR 551
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+W D L+ GH A L I F + G ++S+G D +L+++ ++ R L
Sbjct: 552 IWSIQ----DFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTL 606
Score = 129 (50.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 54/242 (22%), Positives = 96/242 (39%)
Query: 172 TCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGN-FAVLGTAGGWIERFN 230
TC D + VWR+ H + + AV + S F V G+ ++ ++
Sbjct: 403 TCAKDKS-VRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWD 461
Query: 231 LQSGISRGSYLDMSERSNY-AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
L + M RS AH +V V + L+ S K+W L
Sbjct: 462 LPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGV 521
Query: 290 WEVGCSLV-KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
V + + V+ +L + + D +R++ + ++ FEGH + F G
Sbjct: 522 CRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGT 581
Query: 349 WLLSSGMDGSLRIWDVIL---ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWV 405
L+SSG DG +++W + R +DA H D + AL +++ T D + +W
Sbjct: 582 QLVSSGSDGLVKLWTIKTNECVRTLDA-HQD-KVWALHGGCRDELMVTGSADST-ITVWT 638
Query: 406 NR 407
++
Sbjct: 639 DK 640
Score = 94 (38.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 27/123 (21%), Positives = 62/123 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVLMS 63
V +++F LLA+G G I +W++ K+ ++ + ++ H + L S
Sbjct: 109 VASMSFDCTST-LLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFS 167
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
+S+D +I++W ++ R + H +P + F +G ++S+G+D+ ++ +Q
Sbjct: 168 SSSDCAIRIWDLRSS----RCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWD-LQ 222
Query: 124 DQQ 126
+Q+
Sbjct: 223 EQK 225
Score = 83 (34.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 41
VTALAFS DG L++SG + S+W+L++++++ I
Sbjct: 195 VTALAFSPDGHTLVSSGRDK-ICSVWDLQEQKVKRTI 230
Score = 82 (33.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+TA A S D + +L S + + ++ W+ ++++ + R H + S+ F +L +
Sbjct: 66 ITAFALSPDDE-MLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATG 124
Query: 65 SADNSIKMW 73
D +IK+W
Sbjct: 125 GCDGTIKLW 133
Score = 56 (24.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/104 (21%), Positives = 43/104 (41%)
Query: 27 ISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLR 86
I+I + ++ I + I + ++ +L+SAS ++ W D R
Sbjct: 44 INILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQW--DWKQQQCRR-S 100
Query: 87 FRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+R+ HS P + F + + G D +L+ VI+ + L
Sbjct: 101 WRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNL 144
Score = 47 (21.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYHR 303
AH +V + + LM++ I VW K R +KS +V SL K + R
Sbjct: 608 AHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVIIKSTKKVDQSLFKFTHFR 664
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 8 LAFSSDGQPLLASGASSGVISIWNLEKRR 36
+ SD L+ +G S GV+ +W+ R
Sbjct: 251 MGVKSDALHLVTAG-SKGVLRVWDSSSSR 278
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK----GRDLKSRWE--VGCSLVKIVYHR 303
AH V G++ +T ++S+ + + W F GR L + GC+L +H
Sbjct: 305 AHESAVTGLSLHATGDYLLSSS---EDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHP 361
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ T D I+++D+ V F GH+ +T FSE+G +L + D SL++WD
Sbjct: 362 DGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWD 421
Query: 364 VILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWV 405
+ R++ + ++L N +V + DQ+G YL V
Sbjct: 422 L---RKLK------NFKTITLDNNYEVKSLVF-DQSGTYLAV 453
Score = 120 (47.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 36/142 (25%), Positives = 64/142 (45%)
Query: 229 FNLQSGISRGSYLDMSERSNYA----HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KG 283
F +G S+ D+ ER+N A H+G V +A + + +K+WD K
Sbjct: 366 FGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLRKL 425
Query: 284 RDLKS-RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFC 342
++ K+ + + +V+ + LA D IR++ V F H+ +T
Sbjct: 426 KNFKTITLDNNYEVKSLVFDQSGTYLAVGGSD--IRVYICKQWSEVLNFSDHSGLVTGVA 483
Query: 343 FSEDGKWLLSSGMDGSLRIWDV 364
F E ++L S+GMD SL+ + +
Sbjct: 484 FGEHAQFLASTGMDRSLKFYSL 505
Score = 97 (39.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 26/112 (23%), Positives = 60/112 (53%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D +L GA V+ +++ + ++ + ++ H + S+ + + V+ SAS+D++I+
Sbjct: 233 TDTNKVLTGGADKNVV-VFDRREEQIVATLK-GHTKKVSSVIYHPAQAVVFSASSDSTIR 290
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
+W T G+ ++ H + + +A G ++LS+ +D+ + FS IQ
Sbjct: 291 VW--SVTGGN--CVQVVRAHESAVTGLSLHATGDYLLSSSEDQ-YWAFSDIQ 337
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 148 (57.2 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 51/176 (28%), Positives = 84/176 (47%)
Query: 269 SAGYHGDIKVWDFKGRDLKSRWEVG-CSLVKIV-YHRVNGLLATVADDLVIRLFDVVALR 326
+A + ++W F R R G S V V +H + +AT + D +RL+
Sbjct: 413 TASHDRTARLWSF-ARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGA 471
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSL 384
VR F GH + FS +GK+L S+G D L++WD+ + H D +I++LS
Sbjct: 472 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTD-TISSLSF 530
Query: 385 SPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQ 440
S + ++A+A +D N V +W R G + D +S E++ S S++ Q
Sbjct: 531 SQDSSLVASASMD-NTVRVWDIRNAH-GSAPTDGCSS--ELIGQYTGSTSNILNVQ 582
Score = 110 (43.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 34/126 (26%), Positives = 55/126 (43%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V AF +D LL+ S + W+L K +V+ H + +
Sbjct: 355 GPVYRTAFLTDASGLLSCSEDS-TVRYWDL-KSFTNTVLYRGHAYPVWDVDVSPCSLYFS 412
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+AS D + ++W F T P LR +GH + C++F+ N +I + D+ RL+S
Sbjct: 413 TASHDRTARLWSFARTY--P--LRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTR 468
Query: 123 QDQQSR 128
Q R
Sbjct: 469 QGASVR 474
Score = 69 (29.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 11 SSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
S+D + LLA+G + + +W+L R+L++ +A D + I L A + ++ AD+
Sbjct: 289 SADSR-LLAAGFDNSAVKLWSLRARKLKAGPHKA-DVSKIRL---ACD--VLEEEADDE- 340
Query: 71 KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
D + + + LR GHS P F + +LS +D R + +
Sbjct: 341 -----DASGSEIKTLR---GHSGPVYRTAFLTDASGLLSCSEDSTVRYWDL 383
Score = 67 (28.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG----RDLKSRWEVGCSLVKIVYHRVNG 306
H G V+ +A + SAG +K+WD +DL+ + SL + + +
Sbjct: 479 HRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLS---FSQDSS 535
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSE 345
L+A+ + D +R++D+ R H TD C SE
Sbjct: 536 LVASASMDNTVRVWDI---R-----NAHGSAPTDGCSSE 566
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 114 (45.2 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 34/158 (21%), Positives = 76/158 (48%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGL-L 308
H+ + +AC +L+ S G ++WD + G+ + E +V + + NG L
Sbjct: 306 HSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSP-NGYQL 364
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDG--KWLLSSGMDGSLRIWDVIL 366
AT + D ++++D+ + + H+ ++D + E G +++ +SG DG +++W+ +
Sbjct: 365 ATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLN 424
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
I ++ V +S+ D ++ D+ + LW
Sbjct: 425 CSLIKSM-VGHEEKVMSVDGYGDRFISSGYDRT-IKLW 460
Score = 101 (40.6 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF--------- 55
+ + FS++G ASG+ G + +WN + + R H + + L ++
Sbjct: 175 IAIVRFSNNGNHF-ASGSWGGQVKVWNSDNLSEVQLFR-GHTDRVSGLDWYPLCQAWDAD 232
Query: 56 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRA 115
+ + L + +ADN++ +W + P LLR GH A + F+ +G +++SA D
Sbjct: 233 SEQLTLATGAADNTVCLW--KASQSTP-LLRLE-GHLARVGRVAFHPSGDYLVSASFDTT 288
Query: 116 FRLFSV 121
+RL+ V
Sbjct: 289 WRLWDV 294
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 147 (56.8 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 41/160 (25%), Positives = 82/160 (51%)
Query: 249 YAHNGEVVGVACDSTNTLM-ISAGYHGDIKVWDFKGRDLK--SRWEVGCSLVKIVYHRVN 305
++ +G+ + C+ T + ++ G K+ D + K + G ++ V +
Sbjct: 208 FSRDGKFIATGCNKTTQVFNVTTG-ELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPD 266
Query: 306 G-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
G LLAT A+D +IR++D+ R+++ GH I F DG L+S D S+RIWD+
Sbjct: 267 GKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL 326
Query: 365 ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++ + ++ +T +++SP+ ++A +D+ V +W
Sbjct: 327 RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRT-VRVW 365
Score = 133 (51.9 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ ++ FS DG+ LLA+GA +I IW+L +R+ ++R H+ I SL FF + L+S
Sbjct: 258 IRSVCFSPDGK-LLATGAEDKLIRIWDLSTKRIIKILR-GHEQDIYSLDFFPDGDRLVSG 315
Query: 65 SADNSIKMWIFDTT 78
S D S+++W T+
Sbjct: 316 SGDRSVRIWDLRTS 329
Score = 82 (33.9 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 27/152 (17%), Positives = 64/152 (42%)
Query: 267 MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALR 326
++S +++WD + + + + L+A + D +R++D
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGF 371
Query: 327 MVRKFE-------GHTDRITDFCFSEDGKWLLSSGMDGSLRIW------DVILARQIDAI 373
+V + + GH D + FS +G+ + S +D ++++W D ++ I
Sbjct: 372 LVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYI 431
Query: 374 -HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
H D + ++ +P+ + + + D+ GV W
Sbjct: 432 GHKDF-VLSVCCTPDNEYILSGSKDR-GVIFW 461
Score = 63 (27.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 28/132 (21%), Positives = 52/132 (39%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSRWEV---GCS- 295
LD + H V VA + + S +K+W +G+ D KS EV G
Sbjct: 376 LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKD 435
Query: 296 -LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKW---LL 351
++ + N + + + D + +D + + +GH + + S + K +
Sbjct: 436 FVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 352 SSGM-DGSLRIW 362
++G D RIW
Sbjct: 496 ATGSGDCKARIW 507
Score = 61 (26.5 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 333 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
GH D + C + D +++LS D + WD
Sbjct: 432 GHKDFVLSVCCTPDNEYILSGSKDRGVIFWD 462
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 147 (56.8 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 41/160 (25%), Positives = 82/160 (51%)
Query: 249 YAHNGEVVGVACDSTNTLM-ISAGYHGDIKVWDFKGRDLK--SRWEVGCSLVKIVYHRVN 305
++ +G+ + C+ T + ++ G K+ D + K + G ++ V +
Sbjct: 208 FSRDGKFIATGCNKTTQVFNVTTG-ELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPD 266
Query: 306 G-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
G LLAT A+D +IR++D+ R+++ GH I F DG L+S D S+RIWD+
Sbjct: 267 GKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL 326
Query: 365 ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++ + ++ +T +++SP+ ++A +D+ V +W
Sbjct: 327 RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRT-VRVW 365
Score = 133 (51.9 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ ++ FS DG+ LLA+GA +I IW+L +R+ ++R H+ I SL FF + L+S
Sbjct: 258 IRSVCFSPDGK-LLATGAEDKLIRIWDLSTKRIIKILR-GHEQDIYSLDFFPDGDRLVSG 315
Query: 65 SADNSIKMWIFDTT 78
S D S+++W T+
Sbjct: 316 SGDRSVRIWDLRTS 329
Score = 82 (33.9 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 27/152 (17%), Positives = 64/152 (42%)
Query: 267 MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALR 326
++S +++WD + + + + L+A + D +R++D
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGF 371
Query: 327 MVRKFE-------GHTDRITDFCFSEDGKWLLSSGMDGSLRIW------DVILARQIDAI 373
+V + + GH D + FS +G+ + S +D ++++W D ++ I
Sbjct: 372 LVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYI 431
Query: 374 -HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
H D + ++ +P+ + + + D+ GV W
Sbjct: 432 GHKDF-VLSVCCTPDNEYILSGSKDR-GVIFW 461
Score = 63 (27.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 28/132 (21%), Positives = 52/132 (39%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSRWEV---GCS- 295
LD + H V VA + + S +K+W +G+ D KS EV G
Sbjct: 376 LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKD 435
Query: 296 -LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKW---LL 351
++ + N + + + D + +D + + +GH + + S + K +
Sbjct: 436 FVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 352 SSGM-DGSLRIW 362
++G D RIW
Sbjct: 496 ATGSGDCKARIW 507
Score = 61 (26.5 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 333 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
GH D + C + D +++LS D + WD
Sbjct: 432 GHKDFVLSVCCTPDNEYILSGSKDRGVIFWD 462
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 117 (46.2 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPVLM 62
AV FS DGQ + + GA + ++ E +L + +AH++ ++ F A++ +
Sbjct: 619 AVYHACFSEDGQRIASCGADK-TLQVFKAETGEKLLEI--KAHEDEVLCCAFSADDKFIA 675
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA--GQDRAFRLFS 120
+ S D +K+W ++ G+ L+R HS C F N H+L A D +L+
Sbjct: 676 TCSVDKKVKIW--NSMTGE--LVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWD 731
Query: 121 VIQDQ 125
+ Q++
Sbjct: 732 LNQEE 736
Score = 108 (43.1 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 47/170 (27%), Positives = 72/170 (42%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL--KSRWEVGCSLVKIVYH 302
E+ H V+ S T S K+W F+ + R GC V+
Sbjct: 1080 EKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLHELRGHKGC--VRCSSF 1137
Query: 303 RVNG-LLATVADDLVIRLFDVV---ALRMVRKF---EG---HTDRITDFCFSEDGKWLLS 352
VN LLAT D+ IR+++V L + EG H +TD CFS D K L+S
Sbjct: 1138 SVNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVS 1197
Query: 353 SGMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGV 401
+G G L+ W+V+ + + ++ + +SP+ T VD G+
Sbjct: 1198 AG--GYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVT--VDNLGI 1243
Score = 99 (39.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 37/163 (22%), Positives = 70/163 (42%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
LLA+G++ + +W+L + ++ + H N++ F ++ VL S SAD ++K+W D
Sbjct: 717 LLATGSNDYFLKLWDLNQEECRNTMF-GHTNSVSHCRFSPDDQVLASCSADGTLKLW--D 773
Query: 77 TTDGDPR----LLRFRSGHSAPP-------LCIRFYANGRHILSAGQDRAFRLFSVIQDQ 125
+ R + +F P C + A+G I+ A +++ F LF +
Sbjct: 774 VKSANERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVF-LFDI---H 829
Query: 126 QSRELSQRHVAKRARXXXXXXXXXXXXPVIAFD--CAEIRERD 166
S L++ H+ + V+A C E+ D
Sbjct: 830 SSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMD 872
Score = 93 (37.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 35/164 (21%), Positives = 69/164 (42%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYH 302
+S H V + + +IS+ +++W+++ D L++ E VK
Sbjct: 999 QSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFFLQAHQET----VKDFRL 1054
Query: 303 RVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
N L + + D +++++++ R+ + F H D + S D S+ D + +IW
Sbjct: 1055 LKNSRLLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIW 1114
Query: 363 DVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNG-VYLW 404
L + + + S S N +LAT D NG + +W
Sbjct: 1115 SFELLSPLHELRGHKGCVRCSSFSVNNTLLATG--DDNGEIRIW 1156
Score = 88 (36.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 18 LASGASSGVISIWNLEKRRL-QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
LA G G I I L R+ QS R H + + F A+ L+S+S D+++++W +
Sbjct: 978 LAFGGEDGAIQILELLNNRIFQS--RNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQ 1035
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ D P L+ H R N R +LS D +++++I
Sbjct: 1036 SED--PFFLQ---AHQETVKDFRLLKNSR-LLSWSFDGTVKVWNII 1075
Score = 83 (34.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V AFS+D + +A+ + + IWN L + E H + HF N L+ A
Sbjct: 662 VLCCAFSADDK-FIATCSVDKKVKIWNSMTGELVRIYDE-HSEQVNCCHFTNNSNHLLLA 719
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
+ N + ++D + R F GH+ RF + + + S D +L+ V
Sbjct: 720 TGSNDYFLKLWDLNQEECRNTMF--GHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSA 777
Query: 125 QQSRELS 131
+ + ++
Sbjct: 778 NERKSIN 784
Score = 82 (33.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
LA +D I++ +++ R+ + GH + F+ DGK L+SS D +++IW+
Sbjct: 978 LAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWN 1033
Score = 80 (33.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V + F++DG+ L++S S V IWN + +AH + N L+S
Sbjct: 1008 VRHIQFTADGKTLISSSDDSAV-QIWNWQSE--DPFFLQAHQETVKDFRLLKNSR-LLSW 1063
Query: 65 SADNSIKMW 73
S D ++K+W
Sbjct: 1064 SFDGTVKVW 1072
Score = 77 (32.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 39/178 (21%), Positives = 72/178 (40%)
Query: 220 GTAGGW-IERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACD-STNTLMISAGYHGDIK 277
GT W ++ N + I+ + SE + EV+ C S + I +
Sbjct: 767 GTLKLWDVKSANERKSINVKQFFLNSEEPQ--EDLEVIVKCCSWSADGAKIMVAAKNKVF 824
Query: 278 VWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA-DDLVIRLFDVVALRMVRKFEGHT 335
++D L + +G S V+ + LA VA + L+ + + V GH
Sbjct: 825 LFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLKVADCRGHL 884
Query: 336 DRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVDVSITALSL 384
+ FS DG L+S D ++R+W+ +L ++ID + + +T L++
Sbjct: 885 SWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQEIDVVFQENEVTVLAV 942
Score = 74 (31.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/115 (19%), Positives = 54/115 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++S+DG ++ A+ + ++++ L + + H +A+ F + + + A
Sbjct: 803 VKCCSWSADGAKIMV--AAKNKVFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVA 860
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ +++W + D ++ R GH + C+ F +G L++ D+ RL+
Sbjct: 861 LSQYCVELW---SMDSGLKVADCR-GHLSWVHCVMFSPDGSSFLTSSDDQTIRLW 911
Score = 58 (25.5 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 41/208 (19%), Positives = 90/208 (43%)
Query: 203 TAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDS 262
+AV+ C S + AV+ + +E +++ SG+ D ++ H V + D
Sbjct: 843 SAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLK---VADCRGHLSWVH---CVMFSPDG 896
Query: 263 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 322
++ L S I++W+ K + K+ V + +V+ N + D+ IR
Sbjct: 897 SSFLTSSDDQ--TIRLWETK-KVCKNSATVLKQEIDVVFQE-NEVTVLAVDN--IR---- 946
Query: 323 VALRMVRKFEGHTDRITDF-----CFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD- 376
L+++ G D +T+ C S ++L G DG+++I +++ R + +
Sbjct: 947 -RLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRNGHK 1005
Query: 377 VSITALSLSPNMDVLATAHVDQNGVYLW 404
++ + + + L ++ D + V +W
Sbjct: 1006 TTVRHIQFTADGKTLISSS-DDSAVQIW 1032
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 125 (49.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 38/165 (23%), Positives = 80/165 (48%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V+ + +L+ S Y G +++WD G+ +K+ + V V NG
Sbjct: 211 AHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKY 270
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFC----FS-EDGKWLLSSGMDGSLRI 361
+LA+ D ++L+D + ++++ GH + + +C FS GKW++S D + I
Sbjct: 271 ILASNLDS-TLKLWDFSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWIISGSEDCKIYI 327
Query: 362 WDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVD-QNGVYLW 404
W++ + + + A P +++A+ ++ N +++W
Sbjct: 328 WNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 34/133 (25%), Positives = 72/133 (54%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V+A++F+ DG L+ASG+ G++ IW+ + + + + + + F N ++++
Sbjct: 216 VSAVSFNRDGS-LIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSAGQDRAFRLF 119
+ D+++K+W D + G + L+ +GH CI +AN G+ I+S +D ++
Sbjct: 275 NLDSTLKLW--DFSKG--KTLKQYTGHENSKYCI--FANFSVTGGKWIISGSEDCKIYIW 328
Query: 120 SVIQDQQSRELSQ 132
++ Q+RE+ Q
Sbjct: 329 NL----QTREIVQ 337
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 204 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 263
++ + S CG + +A ++ +N+ I ER+ H V +A S
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNMDHMIC--------ERTLTGHKLGVNDIAWSSD 140
Query: 264 NTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 322
+ ++SA +K+++ R K+ + ++ + L+ + + D +R++DV
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 323 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--IT 380
++ H+D ++ F+ DG + S DG +RIWD + I + D + +
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 381 ALSLSPNMDVLATAHVDQNGVYLW 404
+ SPN + +++D + LW
Sbjct: 261 FVKFSPNGKYILASNLDST-LKLW 283
Score = 118 (46.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 27/115 (23%), Positives = 61/115 (53%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 309
HN V + ++L++S + +++WD K G +K+ + + ++R L+A
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIA 229
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWD 363
+ + D ++R++D + ++ + F FS +GK++L+S +D +L++WD
Sbjct: 230 SGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 86 (35.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 26/118 (22%), Positives = 54/118 (45%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
++++ FS G+ L S A + IWN++ + + H + + + ++ ++S
Sbjct: 89 SISSAKFSPCGKYLGTSSADK-TVKIWNMDHMICERTLT-GHKLGVNDIAWSSDSRCVVS 146
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K IF+ R+ + GH+ C F ++S D + R++ V
Sbjct: 147 ASDDKTLK--IFEIVTS--RMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Score = 85 (35.0 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H +I S F L ++SAD ++K+W D + L +GH I + +
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTL----TGHKLGVNDIAWSS 139
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSREL 130
+ R ++SA D+ ++F ++ + ++ L
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTL 167
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 125 (49.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 38/165 (23%), Positives = 80/165 (48%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 306
AH+ V V+ + +L+ S Y G +++WD G+ +K+ + V V NG
Sbjct: 211 AHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKY 270
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFC----FS-EDGKWLLSSGMDGSLRI 361
+LA+ D ++L+D + ++++ GH + + +C FS GKW++S D + I
Sbjct: 271 ILASNLDS-TLKLWDFSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWIISGSEDCKIYI 327
Query: 362 WDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVD-QNGVYLW 404
W++ + + + A P +++A+ ++ N +++W
Sbjct: 328 WNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 34/133 (25%), Positives = 72/133 (54%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V+A++F+ DG L+ASG+ G++ IW+ + + + + + + F N ++++
Sbjct: 216 VSAVSFNRDGS-LIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSAGQDRAFRLF 119
+ D+++K+W D + G + L+ +GH CI +AN G+ I+S +D ++
Sbjct: 275 NLDSTLKLW--DFSKG--KTLKQYTGHENSKYCI--FANFSVTGGKWIISGSEDCKIYIW 328
Query: 120 SVIQDQQSRELSQ 132
++ Q+RE+ Q
Sbjct: 329 NL----QTREIVQ 337
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 204 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 263
++ + S CG + +A ++ +N+ I ER+ H V +A S
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNMDHMIC--------ERTLTGHKLGVNDIAWSSD 140
Query: 264 NTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 322
+ ++SA +K+++ R K+ + ++ + L+ + + D +R++DV
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 323 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--IT 380
++ H+D ++ F+ DG + S DG +RIWD + I + D + +
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 381 ALSLSPNMDVLATAHVDQNGVYLW 404
+ SPN + +++D + LW
Sbjct: 261 FVKFSPNGKYILASNLDST-LKLW 283
Score = 118 (46.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 27/115 (23%), Positives = 61/115 (53%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 309
HN V + ++L++S + +++WD K G +K+ + + ++R L+A
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIA 229
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWD 363
+ + D ++R++D + ++ + F FS +GK++L+S +D +L++WD
Sbjct: 230 SGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 86 (35.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 26/118 (22%), Positives = 54/118 (45%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
++++ FS G+ L S A + IWN++ + + H + + + ++ ++S
Sbjct: 89 SISSAKFSPCGKYLGTSSADK-TVKIWNMDHMICERTLT-GHKLGVNDIAWSSDSRCVVS 146
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D ++K IF+ R+ + GH+ C F ++S D + R++ V
Sbjct: 147 ASDDKTLK--IFEIVTS--RMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Score = 85 (35.0 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H +I S F L ++SAD ++K+W D + L +GH I + +
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTL----TGHKLGVNDIAWSS 139
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSREL 130
+ R ++SA D+ ++F ++ + ++ L
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTL 167
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 174 (66.3 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG++++W+V
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNV 378
Score = 130 (50.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I+ I G L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIR--IHGLKSGKT-LKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKVWN 377
Query: 121 V 121
V
Sbjct: 378 V 378
Score = 129 (50.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 57
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 118 LFSVIQDQQSRE 129
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 68 (29.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 267 MISAGYHGDIKVWDFKGRDLKSRWE-VGCSL-VKIVYHRVNGLLATVADDLVI--RLFDV 322
+ISA G +KVW+ K + + ++ +G + I + V LL + V+ R V
Sbjct: 364 IISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVI-LLPKNPEHFVVCNRSNTV 422
Query: 323 VALRM----VRKFEGHTDRITDF--C-FSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV 375
V + M VR F DF C S G+W+ G D L + + + + V
Sbjct: 423 VIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTV 482
Query: 376 -DVSITALSLSPNMDVLATAHVDQNGVY-LW 404
+ + ++ P+ +++AT ++G+ LW
Sbjct: 483 HEKDVIGIAHHPHQNLIAT--YSEDGLLKLW 511
Score = 51 (23.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/105 (22%), Positives = 40/105 (38%)
Query: 258 VACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVI 317
V C+ +NT++I G I V F + V C+L R + V +D V+
Sbjct: 414 VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGEDFVL 466
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
F V ++ R H + + + DG L++W
Sbjct: 467 YCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 48 (22.0 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
ER+ H +V+G+A L+ + G +K+W
Sbjct: 477 ERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 466 KQQIPDLVTLSLLPKSQWQSLINLDII 492
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 116 (45.9 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 296 LVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
L+ +V +G A+ + D I+L+D + + + F GH + C+S D ++L+S
Sbjct: 396 LINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGS 455
Query: 355 MDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQ 398
D +L+IWD+ + + H D + + SP+ D +A+ D+
Sbjct: 456 KDSTLKIWDIKTKKMEKELPGHAD-EVYTVDWSPDGDRVASGSKDR 500
Score = 111 (44.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 269 SAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALR 326
SA + IK+WD + G+ L + R VG ++ ++ + + L + + D ++++D+ +
Sbjct: 411 SASFDKSIKLWDGQSGKFLGNFRGHVG-AVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKK 469
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
M ++ GH D + +S DG + S D LRIW V
Sbjct: 470 MEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 99 (39.9 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 39/132 (29%), Positives = 64/132 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHF--FANEPV- 60
V +A+S D + + +G G I IW + ++L S ++ H I L + F P
Sbjct: 185 VLQVAWSPDSKKIATAGME-GDIRIWCPQTGKQLGSTLK-GHTKFITGLSWEPFHLNPKC 242
Query: 61 --LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 118
L S+S D++I++W DT + L+ SGH+ C+++ G I S QDR R+
Sbjct: 243 VRLASSSKDSTIRIW--DT-ESCKNLMSL-SGHTMSVTCLKWGGEGL-IYSGSQDRTVRV 297
Query: 119 FSVIQDQQSREL 130
F+ + R L
Sbjct: 298 FNTTDGRLVRVL 309
Score = 87 (35.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 264 NTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYHRVNGL--LATVADDLVIR 318
NTL ++ Y +D G++ L+ V V + G+ L + +DD +
Sbjct: 317 NTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVI 376
Query: 319 LFDV-VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+++ V + + GH I FS DG++ S+ D S+++WD
Sbjct: 377 MWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWD 422
Score = 66 (28.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV AFS DG+ ++ G + + IW++ ++ H N ++ + + + + +
Sbjct: 142 AVLNCAFSPDGKGFVSVGGDT-TVRIWDIYTSTPTHTLK-GHTNWVLQVAWSPDSKKIAT 199
Query: 64 ASADNSIKMW 73
A + I++W
Sbjct: 200 AGMEGDIRIW 209
Score = 56 (24.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+VT L + +G L+ SG+ + ++N RL V+ + H + + +L + VL +
Sbjct: 274 SVTCLKWGGEG--LIYSGSQDRTVRVFNTTDGRLVRVL-DGHAHWVNTLAL-NTDYVLRT 329
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
S D++ K +DT + R+ R ++ + G IL +G D
Sbjct: 330 GSYDHTGKE--YDTLEEAQRVALERYND------VKAKSKGMEILISGSD 371
Score = 53 (23.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 15/75 (20%), Positives = 34/75 (45%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H A+++ F + +S D ++++W T+ L GH+ L + + +
Sbjct: 139 HTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTL----KGHTNWVLQVAWSPDS 194
Query: 105 RHILSAGQDRAFRLF 119
+ I +AG + R++
Sbjct: 195 KKIATAGMEGDIRIW 209
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 117 (46.2 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 30/120 (25%), Positives = 61/120 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V A+AFS G +L SG+ + +W++ R+ + AH + + + + ++ S
Sbjct: 264 VYAIAFSPKGN-MLVSGSYDEAVFLWDVRSARVMKSL-PAHSDPVSGIDVVWDGTLIASC 321
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC-IRFYANGRHILSAGQDRAFRLFSVIQ 123
+ D +++W DT+ G + LR PP+ ++F NG+++L+ D RL+ ++
Sbjct: 322 ATDGLVRIW--DTSTG--QCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVE 377
Score = 104 (41.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
+RG V+A+ FS D ++ASG + G + +W +L E H I ++ + +
Sbjct: 176 LRG-VSAVRFSPDAS-MIASGGADGAVKVWAASTGKLIYTF-EGHLAGISTISWSPDGAT 232
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+ S S D +I++W T P GH I F G ++S D A L+
Sbjct: 233 IASGSDDKTIRLWNVLTGKAHPTPF---IGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWD 289
Query: 121 V 121
V
Sbjct: 290 V 290
Score = 99 (39.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 51/205 (24%), Positives = 87/205 (42%)
Query: 184 RLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDM 243
RL N + G+ P + V A S GN V G+ + ++++S
Sbjct: 243 RLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSA--------R 294
Query: 244 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYH 302
+S AH+ V G+ TL+ S G +++WD G+ L++ V V
Sbjct: 295 VMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKF 354
Query: 303 RVNG--LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF--CFSEDGK---------- 348
NG +LA DD V RL+D V R ++ ++GH+++ F G+
Sbjct: 355 SPNGKYVLAWTLDDCV-RLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYA 413
Query: 349 WLLSSGMDGSLRIWDVILARQIDAI 373
+ +S DG++ WDV+ + + I
Sbjct: 414 FAVSGSEDGAILCWDVVTKKVLQRI 438
Score = 98 (39.6 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 276 IKVWDF-KGRDLK-----SRWEVGCSLVKIVYH-----RVNGLLATVA--DDLVIRLFDV 322
+++WD+ +GR LK S + S VY R G V+ +D I +DV
Sbjct: 370 VRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDV 429
Query: 323 VALRMVRKFEGHTDRI--TDFCFSEDGKWLLSSGMDGSLRIWDVI 365
V +++++ E H + D C + +G++++S G+DG++R+W+ +
Sbjct: 430 VTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWEEV 474
Score = 98 (39.6 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +++S DG + ASG+ I +WN+ + H N + ++ F +L+S
Sbjct: 221 ISTISWSPDGATI-ASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSG 279
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D ++ +W D R+++ HS P I +G I S D R++
Sbjct: 280 SYDEAVFLW--DVRSA--RVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTG 335
Query: 125 QQSREL 130
Q R L
Sbjct: 336 QCLRTL 341
Score = 82 (33.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 38 QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC 97
Q + H + ++ F + ++ S AD ++K+W T G +L+ GH A
Sbjct: 168 QKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAAST--G--KLIYTFEGHLAGIST 223
Query: 98 IRFYANGRHILSAGQDRAFRLFSVI 122
I + +G I S D+ RL++V+
Sbjct: 224 ISWSPDGATIASGSDDKTIRLWNVL 248
Score = 67 (28.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 250 AHNGEVVGVACDSTNT--LMISAGYHGDIKVWDFKG 283
AH+G V+GV ST M+S G G ++VW+ G
Sbjct: 440 AHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWEEVG 475
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 118 (46.6 bits), Expect = 0.00085, P = 0.00085
Identities = 19/68 (27%), Positives = 41/68 (60%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H + ++A+ ++D I+++D ++ R +GHTD + D GK L+S
Sbjct: 109 ITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSS 168
Query: 356 DGSLRIWD 363
D S+++WD
Sbjct: 169 DLSIKLWD 176
Score = 111 (44.1 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
++AS + I +W+ E +L+ ++ H +A+ + A L+S S+D SIK+W F
Sbjct: 120 IMASCSEDATIKVWDYETGQLERTLK-GHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFG 178
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
T L+ GH + F G +LSA +D + + +
Sbjct: 179 QTYD---CLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDI 220
Score = 101 (40.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 24/111 (21%), Positives = 53/111 (47%)
Query: 255 VVGVACDSTNT-LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVA 312
V G + +T ++ S IK W+ D+ + V+ + +H L +VA
Sbjct: 292 VTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVA 351
Query: 313 DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
DD +R++++ A R ++ E H ++ F + ++++ +D S ++W+
Sbjct: 352 DDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 88 (36.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRR--LQSVIREAHDNAIISLHFFANEPVL 61
AV +A + G+ L+ S +S I +W+ + L+S+ + H++ + S+ F +
Sbjct: 150 AVNDIAIDAAGKQLV-SCSSDLSIKLWDFGQTYDCLKSL--KGHEHTVSSVTFLPTGDFV 206
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+SAS D++IK W D + G + FR GH+ IR +G SA D+ ++S
Sbjct: 207 LSASRDHTIKQW--DISTGYC-VYTFR-GHNDWVRMIRISNDGTLFASASLDQTVTVWS 261
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 136 (52.9 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 204 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 263
A+ + T S GN + I+ +N+Q+ + Y E+ AHN + ++ + T
Sbjct: 1830 AITSITFSPSGNLIASTSEDLLIKVWNVQT--HKAEYT--IEK---AHNDPINCISFNPT 1882
Query: 264 NTL-MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFD 321
N +IS KVW E + +K VY +ATV+ D I ++
Sbjct: 1883 NECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYL 1942
Query: 322 VVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVS 378
+ +++ + +GHTD + +FC FS D K L+S G D +LR+W++ +++ + H S
Sbjct: 1943 CSSKKLLFRLKGHTDWV-NFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSS-S 2000
Query: 379 ITALSLSPNMDVLATAHVDQNGVYLW 404
I + + + +A D V +W
Sbjct: 2001 IEKAFFTKDQKYIISASFD-GSVKVW 2025
Score = 120 (47.3 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 42/162 (25%), Positives = 66/162 (40%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVG-CSLVKIVYHRVNGLL 308
H+ V + + +++ KVW G L + G C + + LL
Sbjct: 1739 HSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLL 1798
Query: 309 ATVADDLVIRLFDVVA---LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
A A D +RLFDV + R V K GHT IT FS G + S+ D +++W+V
Sbjct: 1799 AVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQ 1858
Query: 366 LARQ---IDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ I+ H D I +S +P + + D +W
Sbjct: 1859 THKAEYTIEKAHND-PINCISFNPTNECELISCSDDYSTKVW 1899
Score = 118 (46.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 32/117 (27%), Positives = 60/117 (51%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF-ANEPVLM 62
A+T++ FS G L+AS + +I +WN++ + + I +AH++ I + F NE L+
Sbjct: 1830 AITSITFSPSGN-LIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELI 1888
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S S D S K+W TT L + C+ + +G++I + +D + ++
Sbjct: 1889 SCSDDYSTKVWSRFTTS---TTLSTEGSTNTIKHCV-YSPDGKYIATVSRDCSIAVY 1941
Score = 93 (37.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 34/121 (28%), Positives = 52/121 (42%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV FS LL S A I I+N + + R AH + S + + ++ S
Sbjct: 1608 AVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIAS 1667
Query: 64 ASADNSIKMWI-FDTTDGD--PRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+S D +IK+W FDT D ++ + + C +F AN + IL+ LF
Sbjct: 1668 SSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSC-KFSANSKQILATTMKNDVLLFD 1726
Query: 121 V 121
V
Sbjct: 1727 V 1727
Score = 93 (37.8 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 16/67 (23%), Positives = 38/67 (56%)
Query: 314 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 373
D +R++++ + + +GH+ I F++D K+++S+ DGS+++WD +I ++
Sbjct: 1977 DFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSL 2036
Query: 374 HVDVSIT 380
I+
Sbjct: 2037 RHQTRIS 2043
Score = 84 (34.6 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 37/158 (23%), Positives = 70/158 (44%)
Query: 261 DSTNTLMI-SAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRL 319
D+ TL I S+ G +K+W+F + G S+ + V+ + +AT D V+ +
Sbjct: 2113 DAPVTLSIASSSDDGTVKLWEFNSATATTSAHKG-SINQCVFSKDGKYVATCGQDCVLNI 2171
Query: 320 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM-DGSLRI----WDVILARQIDAIH 374
+D + K +T F+ G +L G+ DG+L + W +L ++
Sbjct: 2172 WDAKT-HINLKTMIFESPVTTCSFNRSG--VLFIGLQDGTLEVYSKDWKTVLHKE----K 2224
Query: 375 VDVSITALSLSPNMDVLATA---HVDQNGVYLWVNRCM 409
+ IT S P++++ +T ++D W N C+
Sbjct: 2225 TNGKITRSSAHPSLNIQSTESPDYIDLFAFSTWTN-CV 2261
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 34/134 (25%), Positives = 57/134 (42%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPVL 61
GA TA +S DG ++AS +I I+ L +++ H N I F + L
Sbjct: 1524 GA-TACCYSRDGS-MIASAGKDSIIHIFKASNGSELLTLV--GHSNWISCFSFSDDGKTL 1579
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL-SAGQDRAFRLFS 120
S+S DN++ +W D G+ ++ +F+ A C F ++L S D + +F+
Sbjct: 1580 ASSSWDNTVIVW--DLIVGN-QIHQFKDHSRAVNYC-EFSPTANNLLMSCAWDSSIIIFN 1635
Query: 121 VIQDQQSRELSQRH 134
R H
Sbjct: 1636 TSDKNIFRNFRSAH 1649
Score = 80 (33.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 32/138 (23%), Positives = 67/138 (48%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G++ + FS++ + +LA+ + V+ ++++ ++L SV+ H ++ + ++
Sbjct: 1699 GSIKSCKFSANSKQILATTMKNDVL-LFDVNSQKLISVMGN-HSKSVNHCSLSNDGNYIV 1756
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ-DRAFRLFSV 121
+ S D + K+W +T G +L F C+ F + +L+ G D RLF V
Sbjct: 1757 TGSDDATAKVW--SSTLGT-QLTNFLIPGDCWANCLAFSPT-QPLLAVGATDCTVRLFDV 1812
Query: 122 IQDQQSRELSQRHVAKRA 139
+ RE+++ H RA
Sbjct: 1813 SSNTIYREVAKLHGHTRA 1830
Score = 72 (30.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 37/143 (25%), Positives = 60/143 (41%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQS-GISRGSYLDMSERSNYAHNGEVVGVACDST 263
V CT S V +GGW FNL+ I L + H+ +
Sbjct: 1959 VNFCTFSPDSKKLV---SGGW--DFNLRVWNIKTQKELLCLK----GHSSSIEKAFFTKD 2009
Query: 264 NTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 321
+ISA + G +KVWD + G ++ S R + S V + +G + + +DD +I+ +
Sbjct: 2010 QKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDV-VSSSDASGRIFSSSDDGIIKSWY 2068
Query: 322 VVALRMVRKFEGHTDRITDFCFS 344
VA + GH+ I F+
Sbjct: 2069 PVAGSCLATLTGHSGPIKQVQFN 2091
Score = 44 (20.5 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 404 WVNRCMFSGDS 414
WVN C FS DS
Sbjct: 1958 WVNFCTFSPDS 1968
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 118 (46.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 37/121 (30%), Positives = 54/121 (44%)
Query: 246 RSNYAHNGEV--VGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHR 303
R NY G V C T + S Y I+VW+ K + + G + V H
Sbjct: 613 RCNYTLKGHTKWVTTIC-ILGTNLYSGSYDKTIRVWNLKSLECSATLR-GHD--RWVEHM 668
Query: 304 V--NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
V + LL T +DD I+++D+ LR EGH + ED K ++S D S+R+
Sbjct: 669 VICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRV 728
Query: 362 W 362
W
Sbjct: 729 W 729
Score = 100 (40.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V ++ ++ L SG+S I +W+L+K R + E HD + ++ N+ L
Sbjct: 503 GPVESICYNDQ---YLFSGSSDHSIKVWDLKKLRCIFTL-EGHDKPVHTV--LLNDKYLF 556
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S+D +IK+W T + L + LCI +G+++ S D+ +++ +
Sbjct: 557 SGSSDKTIKVWDLKTLECKYTLESH--ARAVKTLCI----SGQYLFSGSNDKTIKVWDL 609
Score = 98 (39.6 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 276 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGH 334
IKVWD K + K E VK + ++G L + ++D I+++D+ R +GH
Sbjct: 564 IKVWDLKTLECKYTLESHARAVKTLC--ISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGH 621
Query: 335 TDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
T +T C G L S D ++R+W++
Sbjct: 622 TKWVTTICIL--GTNLYSGSYDKTIRVWNL 649
Score = 86 (35.3 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 17 LLASGASSGVISIWNLEKRRLQSV-IREAHDNAIISLHFFANEPVLMSASADNSIKMWIF 75
LL +G S I +++ + + ++ V + H+ + S+ + N+ L S S+D+SIK+W
Sbjct: 472 LLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVWDL 529
Query: 76 DTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
R + GH P + N +++ S D+ +++ +
Sbjct: 530 KKL----RCIFTLEGHDKPVHTVLL--NDKYLFSGSSDKTIKVWDL 569
Score = 42 (19.8 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 640 ETVRCHTKLQDKARKLLEVQS-AVWQKIDKMFQSARCVVS 678
ET+RC+T L+ VQ AVW+ DK +CV+S
Sbjct: 690 ETLRCNTTLEGHNAT---VQCLAVWE--DK-----KCVIS 719
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 129 (50.5 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +H +AT + D +RL+DV VR F GH + S DG+++ S DG+
Sbjct: 508 VQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGT 567
Query: 359 LRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
+ +WD+ AR I + S + +LS S +LA+ D V LW
Sbjct: 568 IMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCT-VKLW 613
Score = 104 (41.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + FS G +L+S A + I +W+ K V + H+ + F
Sbjct: 419 GPVYSATFSPPGDFVLSSSADT-TIRLWST-KLNANLVCYKGHNYPVWDAQFSPFGHYFA 476
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D + ++W D P LR +GH + C++++ N +I + D+ RL+ V
Sbjct: 477 SCSHDRTARIWSMDRIQ--P--LRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDV 531
Score = 83 (34.3 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + S F ++S+SAD +I++W +T + L+ ++ GH+ P +F G
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLW---STKLNANLVCYK-GHNYPVWDAQFSPFG 472
Query: 105 RHILSAGQDRAFRLFSVIQDQQSR 128
+ S DR R++S+ + Q R
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLR 496
Score = 79 (32.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/91 (24%), Positives = 45/91 (49%)
Query: 276 IKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEG 333
+++WD + + R +G S+V + +G +A+ +D I ++D+ R + G
Sbjct: 526 VRLWDVQTGECV-RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMG 584
Query: 334 HTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
H + +S +G L S D ++++WDV
Sbjct: 585 HNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 66 (28.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V+ +A M S G I +WD R + + + Y LLA
Sbjct: 543 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLA 602
Query: 310 TVADDLVIRLFDVVALRMVRKFE---GHTDRI 338
+ + D ++L+DV + + K E G+++R+
Sbjct: 603 SGSADCTVKLWDVTSSTKLTKAEEKNGNSNRL 634
Score = 53 (23.7 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
GHS P F G +LS+ D RL+S
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWS 446
Score = 47 (21.6 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 9 AFSSDGQPLLASGASSGVISIWNLEK 34
+ S DG L+A G S I +W++ K
Sbjct: 359 SISHDGS-LVAGGFSDSSIKVWDMAK 383
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 128 (50.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 40/139 (28%), Positives = 61/139 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 307
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSL 227
Query: 368 RQIDAIHVDVSITALSLSP 386
+ + V S+ A L P
Sbjct: 228 QATRTVPVFESVEAAVLLP 246
Score = 120 (47.3 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 43/176 (24%), Positives = 74/176 (42%)
Query: 233 SGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV 292
+G G ++ + H+ ++ VA + L+ + K+W L +
Sbjct: 460 TGHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSG 519
Query: 293 GC-SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLL 351
L + + ++ +LAT + D I+L+ + ++ FEGH + F G LL
Sbjct: 520 HRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLL 579
Query: 352 SSGMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
SSG DG L++W + R +DA H D + L S +D A + V LW
Sbjct: 580 SSGSDGLLKLWTIKNNECVRTLDA-HED-KVWGLHCS-RLDDRALTGASDSRVVLW 632
Score = 112 (44.5 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 47/187 (25%), Positives = 89/187 (47%)
Query: 268 ISAGYHGDIKVWDF-KGRDLKSRWEV---GCSLVKIVYHRVNGLLATVADDLVIRLFDVV 323
++AG G ++VW+ GR + ++ + G L GLL +V D + L+D
Sbjct: 263 LTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAH 322
Query: 324 ALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSIT 380
+LR+ ++F G+++ + D F ED +++S L+++D+ A QI H D+ +
Sbjct: 323 SLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSP-CLKVFDLQTSACQILHGHTDI-VL 380
Query: 381 ALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSVKMPSVS 434
AL + + A+ DQ+ + +W +N+ C+ G + S + I ++
Sbjct: 381 ALDVFRKGRLFASCAKDQS-IRVWRMNKSGEVACVAQGSGHTHSVGT---ICCSRLKETF 436
Query: 435 SVEGCQD 441
V G QD
Sbjct: 437 LVTGSQD 443
Score = 104 (41.7 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 3 GAVTALAFSSD-GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G V +AF D + LL S A+ I +W+L++R +V+ AH +A+ SL F A+ +
Sbjct: 152 GVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLT-AHYSAVTSLTFSADGHTM 210
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSA--------PPLCIRFYANGRHILSAGQD 113
+S+ D +W + + F S +A P L ++ + G H L+AG
Sbjct: 211 LSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVK--SAGLHFLTAGDQ 268
Query: 114 RAFRLF 119
A R++
Sbjct: 269 GALRVW 274
Score = 94 (38.1 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 61
V +AF LLA+G G + +W++ R ++ L F +P +L
Sbjct: 112 VATMAFDPTST-LLATGGCDGAVRVWDVV--RCYGTHHFRGSPGVVHLVAFHPDPARLLL 168
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S++AD SI++W + L + H + + F A+G +LS+G+D+ ++ +
Sbjct: 169 FSSAADTSIRVWSLQ----ERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDL 224
Query: 122 IQDQQSR 128
Q +R
Sbjct: 225 RSLQATR 231
Score = 65 (27.9 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 13 DGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKM 72
D ++AS +S + +++L+ Q I H + +++L F + S + D SI++
Sbjct: 347 DSHVVVAS--NSPCLKVFDLQTSACQ--ILHGHTDIVLALDVFRKGRLFASCAKDQSIRV 402
Query: 73 WIFDTTDGDPRLLRFRSGHS 92
W + + G+ + SGH+
Sbjct: 403 WRMNKS-GEVACVAQGSGHT 421
Score = 58 (25.5 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 23/132 (17%), Positives = 58/132 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+TA S D + +L + + + +++ W ++ + + + H + ++ F +L +
Sbjct: 69 ITAFDLSPDDK-VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATG 127
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 122
D ++++W G FR L + F+ + +L S+ D + R++S +
Sbjct: 128 GCDGAVRVWDVVRCYGTHH---FRGSPGVVHL-VAFHPDPARLLLFSSAADTSIRVWS-L 182
Query: 123 QDQQSRELSQRH 134
Q++ + H
Sbjct: 183 QERSCLAVLTAH 194
Score = 57 (25.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 25/104 (24%), Positives = 45/104 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA--HDNAIISLHFFA-NEPVL 61
V AL G+ L AS A I +W + K + + + H +++ ++ E L
Sbjct: 379 VLALDVFRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFL 437
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGR 105
++ S D ++K+W LL +GH P+ ++ A R
Sbjct: 438 VTGSQDCTVKLWPLPEA-----LLSKGTGHEGGPVFLQAQATQR 476
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 376 DVSITALSLSPNMDVLATAHVDQNGVYLW-VNRCMFSG 412
D I +++++PN +LAT D+ LW + RC G
Sbjct: 479 DKDINSVAVAPNDKLLATGSQDRTAK-LWALPRCQLLG 515
Score = 38 (18.4 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 589 IIDHDDHQELDKRPEYLSIELLLDYLIHE 617
+ + + +E KR E + + LD L+HE
Sbjct: 635 VTEAEQAEEQAKREEQVVKQQELDNLLHE 663
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 82/375 (21%), Positives = 140/375 (37%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG-HSAPPLCIR---- 99
H A+ + F + + S S IK+W DTT G L + SG H I+
Sbjct: 619 HSEAVWRVAFSPDGKQIASGSDSGLIKLW--DTTTGS--LQKTLSGSHPKRRYQIQQEQV 674
Query: 100 ----FYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARXXXXX----XXXXXX 151
F + + I+S D + L+ + +E++ +
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTGDR-QEIADHFGISKVNYTYLQPPEQGGYGLH 733
Query: 152 XPVIAFDCAEIRERDWCNVVTCHM--DTAQAYVWRLQNFVLGEHILRPCPENPTAVKACT 209
+ DC +I W TC M DTA LQ + G C
Sbjct: 734 AGAFSADCKQIAAFGWSRDSTCIMLFDTATG---DLQKILKGHS--HEC-------STMA 781
Query: 210 ISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMIS 269
S+ V G+ + +N +G D+ E++ H G V+ VA S ++S
Sbjct: 782 FSSDSRQLVTGSVDCTVRLWNTTTG-------DL-EKTFVGHTGTVLSVAISSDGRQIVS 833
Query: 270 AGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVR 329
+K+WD DL G + + + + +A D I ++D + +
Sbjct: 834 GSIEA-VKLWDAATGDLLKTLASGFA-GSVAFSPDSRQIAAGFKDGKIFIWDAAGT-LQK 890
Query: 330 KFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMD 389
E H I FS D K L++ D +++ WD+ + +A+ +T + LSP+
Sbjct: 891 TLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGK 950
Query: 390 VLATAHVDQNGVYLW 404
V+A+ D+ + LW
Sbjct: 951 VIASGSADKT-IKLW 964
Score = 117 (46.2 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 36/157 (22%), Positives = 72/157 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLL 308
H G ++ +A +++ IK WD ++ VG S + +V ++
Sbjct: 895 HPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEA--VGHSKHVTTMVLSPDGKVI 952
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D I+L+D + + GH D + FS D + ++S + +++IWD +
Sbjct: 953 ASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE-AVKIWDAATGK 1011
Query: 369 QIDAIHVDVSITALSLSPNMDVLATAHVDQNG-VYLW 404
++ D T +++SP+ +A+ H NG + LW
Sbjct: 1012 VQNSFESDDVFTIVAVSPDGKHIASGHC--NGRIKLW 1046
Score = 113 (44.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++AFS D + + A+G G I IW+ LQ + E H AI+S+ F + L+
Sbjct: 856 GFAGSVAFSPDSRQI-AAGFKDGKIFIWDAAGT-LQKTL-ERHPGAIMSIAFSPDVKQLV 912
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ S D++IK W D T G ++ GHS + +G+ I S D+ +L+
Sbjct: 913 TCSTDSTIKRW--DITIGG---VQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAA 967
Query: 123 QDQQSRELS 131
+ L+
Sbjct: 968 TGDLQKTLT 976
Score = 110 (43.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 29/108 (26%), Positives = 53/108 (49%)
Query: 257 GVACDSTNTLMISAGYH-GDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL 315
G S ++ I+AG+ G I +WD G K+ +++ I + L T + D
Sbjct: 859 GSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDS 918
Query: 316 VIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
I+ +D+ + V++ GH+ +T S DGK + S D ++++WD
Sbjct: 919 TIKRWDIT-IGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWD 965
Score = 106 (42.4 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH--------DNAIISLHFF 55
AV +AFS DG+ + ASG+ SG+I +W+ LQ + +H + ++ F
Sbjct: 622 AVWRVAFSPDGKQI-ASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFL 680
Query: 56 ANEPVLMSASADNSIKMWIFDTTDGD 81
+ +++S D S+ +W DTT GD
Sbjct: 681 PDSKLIISGYYDGSVMLW--DTTTGD 704
Score = 102 (41.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 32/113 (28%), Positives = 61/113 (53%)
Query: 9 AFSSDGQPLLASGAS--SGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASA 66
AFS+D + + A G S S I +++ LQ +++ H + ++ F ++ L++ S
Sbjct: 736 AFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILK-GHSHECSTMAFSSDSRQLVTGSV 794
Query: 67 DNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
D ++++W +TT GD L + GH+ L + ++GR I+S G A +L+
Sbjct: 795 DCTVRLW--NTTTGD--LEKTFVGHTGTVLSVAISSDGRQIVS-GSIEAVKLW 842
Score = 92 (37.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/115 (23%), Positives = 50/115 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV-KIVYHRVNGLLA 309
H+ V + ++ S IK+WD DL+ V K+V+ N +
Sbjct: 936 HSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIV 995
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + V +++D ++ FE D T S DGK + S +G +++WD+
Sbjct: 996 SCSSEAV-KIWDAATGKVQNSFESD-DVFTIVAVSPDGKHIASGHCNGRIKLWDM 1048
Score = 79 (32.9 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 6 TALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSAS 65
+ +AFSSD + L+ +G+ + +WN L+ H ++S+ ++ ++S S
Sbjct: 778 STMAFSSDSRQLV-TGSVDCTVRLWNTTTGDLEKTF-VGHTGTVLSVAISSDGRQIVSGS 835
Query: 66 ADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+ ++K+W D GD L SG + + F + R I + +D
Sbjct: 836 IE-AVKLW--DAATGD-LLKTLASGFAGS---VAFSPDSRQIAAGFKD 876
Score = 66 (28.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 337 RITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHVDVSIT-ALSLS 385
+IT FS D K +LS+ D ++++WD L +++ H D IT A S S
Sbjct: 1085 QITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPC-HSDSIITDAFSRS 1136
Score = 58 (25.5 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 333 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
G+ + I FS DG+ + ++ D ++R+W +
Sbjct: 1138 GYPNWIFSVAFSSDGQHIAAASADKTIRVWSI 1169
Score = 50 (22.7 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 252 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNG 306
N ++ G+ L++S IK+WD DL+ R S++ + R +G
Sbjct: 1083 NTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSG 1138
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 172 (65.6 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 129 (50.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 57
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 118 LFSVIQDQQSRE 129
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 128 (50.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I+ I G L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIR--IHGLKSGKT-LKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/168 (19%), Positives = 66/168 (39%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQS----------GISRGSYLDMSERSNYAHNGE 254
V T + G++ + ++ G ++ +N+++ G + G+ + ++ N E
Sbjct: 352 VNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411
Query: 255 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADD 314
V C+ +NT++I G I V F + V C+L R + V +D
Sbjct: 412 HF-VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGED 463
Query: 315 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
V+ F V ++ R H + + + DG L++W
Sbjct: 464 FVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 466 KQQIPDLVTLSLLPKSQWQSLINLDII 492
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 172 (65.6 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 129 (50.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 57
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 118 LFSVIQDQQSRE 129
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 128 (50.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I+ I G L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIR--IHGLKSGKT-LKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/168 (19%), Positives = 66/168 (39%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQS----------GISRGSYLDMSERSNYAHNGE 254
V T + G++ + ++ G ++ +N+++ G + G+ + ++ N E
Sbjct: 352 VNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411
Query: 255 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADD 314
V C+ +NT++I G I V F + V C+L R + V +D
Sbjct: 412 HF-VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGED 463
Query: 315 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
V+ F V ++ R H + + + DG L++W
Sbjct: 464 FVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 466 KQQIPDLVTLSLLPKSQWQSLINLDII 492
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 172 (65.6 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 129 (50.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 57
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 118 LFSVIQDQQSRE 129
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 128 (50.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I+ I G L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIR--IHGLKSGKT-LKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/168 (19%), Positives = 66/168 (39%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQS----------GISRGSYLDMSERSNYAHNGE 254
V T + G++ + ++ G ++ +N+++ G + G+ + ++ N E
Sbjct: 352 VNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411
Query: 255 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADD 314
V C+ +NT++I G I V F + V C+L R + V +D
Sbjct: 412 HF-VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGED 463
Query: 315 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
V+ F V ++ R H + + + DG L++W
Sbjct: 464 FVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 466 KQQIPDLVTLSLLPKSQWQSLINLDII 492
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 172 (65.6 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 129 (50.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 57
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 118 LFSVIQDQQSRE 129
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 128 (50.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I+ I G L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIR--IHGLKSGKT-LKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/168 (19%), Positives = 66/168 (39%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQS----------GISRGSYLDMSERSNYAHNGE 254
V T + G++ + ++ G ++ +N+++ G + G+ + ++ N E
Sbjct: 352 VNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411
Query: 255 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADD 314
V C+ +NT++I G I V F + V C+L R + V +D
Sbjct: 412 HF-VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGED 463
Query: 315 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
V+ F V ++ R H + + + DG L++W
Sbjct: 464 FVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 466 KQQIPDLVTLSLLPKSQWQSLINLDII 492
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 109 (43.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 31/104 (29%), Positives = 55/104 (52%)
Query: 262 STNTLMI-SAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLLATVADDLVIR 318
S +T +I SA + IK+W+ + G+ L S R V ++ +I + + LL + + D ++
Sbjct: 394 SPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVS-AVYQIAWSADSRLLVSGSSDSTLK 452
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
++D ++ GH D + +S DG+ + S G D LRIW
Sbjct: 453 VWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 104 (41.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL-----HFFANEP 59
V ++A+S DG+ L ASG + I +W+ + H I L H
Sbjct: 172 VLSIAWSPDGKKL-ASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECR 230
Query: 60 VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
L SAS D SI++W DT G R + +GH+ C+++ +G + S+ QDR +++
Sbjct: 231 YLASASKDGSIRIW--DTLMG--RCDKILTGHTQSVTCVKWGGDGL-LYSSSQDRTIKVW 285
Score = 96 (38.9 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 33/133 (24%), Positives = 66/133 (49%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++AFS G+ LASG+ + W+L Q + H + ++S+ + + L S
Sbjct: 129 AVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPQFTAK-GHRHWVLSIAWSPDGKKLAS 186
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF---YANG--RHILSAGQDRAFRL 118
++ I +W D G+ ++ R +GHS C+ + + N R++ SA +D + R+
Sbjct: 187 GCKNSQIFLW--DPATGN-QIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRI 243
Query: 119 FSVIQDQQSRELS 131
+ + + + L+
Sbjct: 244 WDTLMGRCDKILT 256
Score = 84 (34.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
++A+ + D I+L++ + + GH + +S D + L+S D +L++WD
Sbjct: 399 IIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAET 458
Query: 367 AR-QIDAI-HVDVSITALSLSPNMDVLATAHVDQ 398
+ ID H D + A SP+ +A+ D+
Sbjct: 459 KKLAIDLPGHAD-EVFATDWSPDGQRVASGGKDK 491
Score = 68 (29.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 301 YHRVNGL----LATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
Y +V G L + +DD + L+ + + + GH I FS D + + S+
Sbjct: 346 YDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASF 405
Query: 356 DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
D S+++W+ + + ++ VS + ++ S + +L + D + +W
Sbjct: 406 DKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDST-LKVW 454
Score = 67 (28.6 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
E H A+IS+ F L S S D +++ W D + P+ GH L I +
Sbjct: 124 EGHTEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPQFTA--KGHRHWVLSIAWSP 179
Query: 103 NGRHILS 109
+G+ + S
Sbjct: 180 DGKKLAS 186
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 117 (46.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 47/168 (27%), Positives = 73/168 (43%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ER H G V+ A S T S K+W F+ + S V+ +
Sbjct: 1078 ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSL 1137
Query: 305 NG-LLATVADDLVIRLFDVV---ALRMVRKF---EG---HTDRITDFCFSEDGKWLLSSG 354
+G LLAT D+ IR+++V L + EG H +TD CFS D K L+S+G
Sbjct: 1138 DGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAG 1197
Query: 355 MDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGV 401
G L+ W+V+ + + ++ + +SP+ T VD G+
Sbjct: 1198 --GYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFRTYVT--VDNLGI 1241
Score = 105 (42.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 32/125 (25%), Positives = 61/125 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPVLM 62
AV FS DGQ + + GA + ++ E +L + +AH++ ++ F +++ +
Sbjct: 617 AVYHACFSQDGQRIASCGADK-TLQVFKAETGEKLLDI--KAHEDEVLCCAFSSDDSYIA 673
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA-GQDRAF-RLFS 120
+ S D +K+W D+ G +L+ HS C F H+L A G + +F +L+
Sbjct: 674 TCSVDKKVKIW--DSGTG--KLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWD 729
Query: 121 VIQDQ 125
+ Q +
Sbjct: 730 LNQKE 734
Score = 82 (33.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 43/176 (24%), Positives = 76/176 (43%)
Query: 267 MISAGYHGDIKVWD-FKGR-DLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 324
++S + G +KVW+ GR + G L + +T AD +++
Sbjct: 1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTA-KIWSFEL 1116
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVI---LARQIDAIHVDVS-- 378
+ + +GH + FS DG LL++G D G +RIW+V L I ++
Sbjct: 1117 PSPLHELKGHNSCVRCSAFSLDGI-LLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTA 1175
Query: 379 -----ITALSLSPNMDVLATAHVDQNGVYL-WVNRCMFSGDSNIDSYASGKEIVSV 428
+T + SP+ +L +A G YL W N + +G+S+ Y +G + +
Sbjct: 1176 THGGWVTDVCFSPDRKMLVSA-----GGYLKWWN--VVTGESSQTFYTNGTNLKKI 1224
Score = 75 (31.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+A G G I I L R+ S H A+ + F A+ L+S+S D+ I++W + T
Sbjct: 976 VAFGDEEGAIKIIELPNNRVFSS-GIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
+ F H R + R +LS D ++++VI + R+ +
Sbjct: 1035 EE-----YVFLQAHQETVKDFRLLRDSR-LLSWSFDGTVKVWNVITGRIERDFT 1082
Score = 75 (31.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 34/162 (20%), Positives = 66/162 (40%)
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYHR 303
S H V + + +IS+ I+VW+++ + L++ E VK
Sbjct: 998 SGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQET----VKDFRLL 1053
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ L + + D +++++V+ R+ R F H + S D S+ D + +IW
Sbjct: 1054 RDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113
Query: 364 VILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNG-VYLW 404
L + + S S ++D + A D NG + +W
Sbjct: 1114 FELPSPLHELKGHNSCVRCSAF-SLDGILLATGDDNGEIRIW 1154
Score = 57 (25.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 22/115 (19%), Positives = 51/115 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++S+DG ++ A+ + + ++ L + I H + I F + + + A
Sbjct: 801 VKCCSWSADGDRIIV--AAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIA 858
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ +++W D+ ++ R GH + + F +G L+A D+ R++
Sbjct: 859 LSQYCVELWNIDSR---VKVADCR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVW 909
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 122 (48.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVL 61
G V A+ FS G LLA+G + +W + R + NA I S+ F + L
Sbjct: 318 GEVNAVRFSP-GSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYL 376
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D + ++W D D RL +GHS L RF + I+S DR +L+ +
Sbjct: 377 LAASNDFASRIWTVD----DYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDL 432
Score = 92 (37.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 49/196 (25%), Positives = 86/196 (43%)
Query: 228 RFNLQSG-ISRGSY---LDMSE-RSNYAHNGEV-VGVACDS---TNTLMISAGYHGDIKV 278
RF L + I GSY L + + RS V G +C+ T ++S + ++
Sbjct: 410 RFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRF 469
Query: 279 WD--FKGRDLKSRWEVGCSLVKI-VYHRVNGLLATVADDLVIRLFDVV--ALRMVRKFEG 333
WD ++ ++ + C + + + H LL DDLV ++ D+ A+R +G
Sbjct: 470 WDISYQNYHIQKQLNKLCRVTSLDLNHDRTELLTCSRDDLV-KIIDLRTNAVRQTFNAQG 528
Query: 334 HT--DRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNM 388
T FS DG ++ + DG L +W+V+ L + +D H +I ++S S +
Sbjct: 529 FKCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSS-AINSVSWSLSG 587
Query: 389 DVLATAHVDQNGVYLW 404
+A+ V LW
Sbjct: 588 AFVASVEKGSKAV-LW 602
Score = 85 (35.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 41 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 100
I +AHD + ++ F +L + D +K+W + +P+ +G +A I F
Sbjct: 312 IFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPK--GALTGSNAGITSIEF 369
Query: 101 YANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 137
+ G ++L+A D A R+++V D + R H K
Sbjct: 370 DSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGK 405
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 50/206 (24%), Positives = 93/206 (45%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ +S+ G FA+ G+ G + ++L +G+S ++ H +V+ VA N
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV--------GHTKDVLSVAFSLDN 117
Query: 265 TLMISAGYHGDIKVWDFKGR---DLKSRWEVGCSLVKIVYHRVNGLLATVAD---DLVIR 318
++SA IK+W+ G + E V V N L T+ D ++
Sbjct: 118 RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 378
++++ ++ GHT ++ S DG S G DG + +WD+ +++ ++ +
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 237
Query: 379 ITALSLSPNMDVLATAHVDQNGVYLW 404
I AL SPN L A ++G+ +W
Sbjct: 238 IHALCFSPNRYWLCAA--TEHGIKIW 261
Score = 100 (40.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 262 STNTL---MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVI 317
S NTL ++SA + +KVW+ L+S V V +G L A+ D V+
Sbjct: 159 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 218
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV 377
L+D+ + + E ++ I CFS + WL ++ G ++IWD+ ++ + VD+
Sbjct: 219 LLWDLAEGKKLYSLEANSV-IHALCFSPNRYWLCAATEHG-IKIWDLESKSIVEDLKVDL 276
Query: 378 SITA 381
A
Sbjct: 277 KAEA 280
Score = 98 (39.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKR-RLQSVIRE---AHDNAIISLHFFANEPV 60
VTA+A D ++ S + I +W L K + V + H + + + ++
Sbjct: 18 VTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF 77
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+S S D +++W D G RF GH+ L + F + R I+SA +DR +L++
Sbjct: 78 ALSGSWDGELRLW--DLAAG-VSTRRF-VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
Query: 121 VI 122
+
Sbjct: 134 TL 135
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 108 (43.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 32/117 (27%), Positives = 62/117 (52%)
Query: 249 YAHNGEVVGVACDSTNTLMIS-AGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVN 305
+ H +VV A S + I+ A + +++WD K G+ L + R V ++ + + +
Sbjct: 386 HGHQ-KVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVA-AVYQCAWSTDS 443
Query: 306 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
LL + + D ++++DV + +M GH D++ +S DG+ + S G D ++RIW
Sbjct: 444 RLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 104 (41.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 38/143 (26%), Positives = 72/143 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISL-----HFFANE 58
V+ +A++ D ++A+G+ I W+ +K + +R H I++L H +
Sbjct: 180 VSCVAWAPDAS-IIATGSMDNTIRFWDPKKGSPIGDALRR-HTKPIMALCWQPLHLAPDS 237
Query: 59 -PVLM-SASADNSIKMWIFDTTDGDPRLLRFR-SGHSAPPLCIRFYANGRH-ILSAGQDR 114
P L+ S S DN++++W R L F SGH+AP C+R+ G++ I S+ D+
Sbjct: 238 GPYLLASGSKDNTVRIWNVKL-----RTLLFTLSGHTAPITCVRW--GGQNWIYSSSYDK 290
Query: 115 AFRLFSVIQDQQSRELSQRHVAK 137
R++ +D + + + H A+
Sbjct: 291 TIRIWDA-KDGKCLHILKGHAAR 312
Score = 103 (41.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 33/106 (31%), Positives = 51/106 (48%)
Query: 262 STNTLMISAGY-HGDIKVWDFKG--RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIR 318
ST ++ S Y H D K F R K R+E C +K R L + +DDL +
Sbjct: 319 STEHVLRSGAYDHTDFKPKSFSDERRKAKERYEA-C--LKQSGER----LVSASDDLQLI 371
Query: 319 LFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
L+D + + + K GH + FS DG+ + ++ D S+R+WD
Sbjct: 372 LWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Score = 101 (40.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+AT + D +RL+D + + GH + +S D + L+SS D +L++WDV
Sbjct: 404 IATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Query: 368 R-QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + D + + A+ SP+ +A+ D+ V +W
Sbjct: 464 KMKFDLPGHEDQVFAVDWSPDGQRVASGGADK-AVRIW 500
Score = 101 (40.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK-WLLSSGMDGSLRIWDVI 365
LLA+ + D +R+++V ++ GHT IT C G+ W+ SS D ++RIWD
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPIT--CVRWGGQNWIYSSSYDKTIRIWD-- 296
Query: 366 LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 402
A+ +H+ + + N L+T HV ++G Y
Sbjct: 297 -AKDGKCLHI---LKGHAARVNHLSLSTEHVLRSGAY 329
Score = 78 (32.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G + + FS L +G+ +W+ + + + ++ H N + + + + ++
Sbjct: 135 GTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMK-GHTNWVSCVAWAPDASIIA 193
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAP--PLCIR--FYA--NGRHILSAG-QDRA 115
+ S DN+I+ W D G P R H+ P LC + A +G ++L++G +D
Sbjct: 194 TGSMDNTIRFW--DPKKGSPIGDALRR-HTKPIMALCWQPLHLAPDSGPYLLASGSKDNT 250
Query: 116 FRLFSV 121
R+++V
Sbjct: 251 VRIWNV 256
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 427
+ H + + PN +LA+ D+ + W + F S I+ V
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSVL 238
Query: 428 VKMPSVSSVEGCQD 441
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 139 (54.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 232 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 290 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 349 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 405
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 406 NRC 408
RC
Sbjct: 262 ERC 264
Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+ L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWD 133
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 129
G + R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 134 I-RRKGC--VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 427
+ H + + PN +LA+ D+ + W + F S I+ V
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSVL 238
Query: 428 VKMPSVSSVEGCQD 441
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 139 (54.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 232 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 290 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 349 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 405
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 406 NRC 408
RC
Sbjct: 262 ERC 264
Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+ L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWD 133
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 129
G + R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 134 I-RRKGC--VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 427
+ H + + PN +LA+ D+ + W + F S I+ V
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSVL 238
Query: 428 VKMPSVSSVEGCQD 441
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 139 (54.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 232 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 290 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 349 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 405
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 406 NRC 408
RC
Sbjct: 262 ERC 264
Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+ L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWD 133
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 129
G + R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 134 I-RRKGC--VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 113 (44.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 50/173 (28%), Positives = 76/173 (43%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS-----RWEVGCSLVKI 299
ER H G V+ A S T S K+W F DL S + GC V+
Sbjct: 1078 ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSF---DLLSPLHELKGHNGC--VRC 1132
Query: 300 VYHRVNG-LLATVADDLVIRLFDVVALRMVRKF------EG---HTDRITDFCFSEDGKW 349
++G LLAT D+ IR+++V +++ EG H +TD CFS D K
Sbjct: 1133 SAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT 1192
Query: 350 LLSSGMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGV 401
L+S+G G L+ W+V + + ++ + +SP+ T VD G+
Sbjct: 1193 LVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVT--VDNLGI 1241
Score = 108 (43.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPVLM 62
AV FS DGQ + + GA + ++ E +L + +AH++ ++ F +++ +
Sbjct: 617 AVYHACFSQDGQRIASCGADK-TLQVFKAETGEKLLDI--KAHEDEVLCCAFSSDDSYIA 673
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA-GQDRAF-RLFS 120
+ SAD +K+W D+ G +L+ HS C F H+L A G + F +L+
Sbjct: 674 TCSADKKVKIW--DSATG--KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729
Query: 121 VIQDQ 125
+ Q +
Sbjct: 730 LNQKE 734
Score = 93 (37.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 49/177 (27%), Positives = 77/177 (43%)
Query: 267 MISAGYHGDIKVWD-FKGR-DLKSRWEVGCSLVKIVYHRVNGLLATVADDLV-IRLFDVV 323
++S + G +KVW+ GR + G L + +T AD I FD+
Sbjct: 1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDL- 1116
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVI---LARQIDAIHVDVS- 378
L + + +GH + FS DG LL++G D G +RIW+V L I V+
Sbjct: 1117 -LSPLHELKGHNGCVRCSAFSLDGI-LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGT 1174
Query: 379 ------ITALSLSPNMDVLATAHVDQNGVYL-WVNRCMFSGDSNIDSYASGKEIVSV 428
+T + SP+ L +A G YL W N + +GDS+ Y +G + +
Sbjct: 1175 ATHGGWVTDVCFSPDSKTLVSA-----GGYLKWWN--VATGDSSQTFYTNGTNLKKI 1224
Score = 80 (33.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 31/114 (27%), Positives = 51/114 (44%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+A G G I I L R+ S H A+ + F A+ L+S+S D+ I++W + T
Sbjct: 976 VAFGDEDGAIKIIELPNNRVFSS-GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 131
GD F H R + R +LS D ++++VI + R+ +
Sbjct: 1035 --GD---YVFLQAHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITGRIERDFT 1082
Score = 75 (31.5 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 39/165 (23%), Positives = 69/165 (41%)
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYHR 303
S H V + + +IS+ I+VW+++ D L++ E VK
Sbjct: 998 SGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQET----VKDFRLL 1053
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ L + + D +++++V+ R+ R F H + S D S+ D + +IW
Sbjct: 1054 QDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113
Query: 364 VILARQIDAI--HVD-VSITALSLSPNMDVLATAHVDQNG-VYLW 404
L + + H V +A SL + LAT D NG + +W
Sbjct: 1114 FDLLSPLHELKGHNGCVRCSAFSLDGIL--LATG--DDNGEIRIW 1154
Score = 71 (30.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 313 DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+D I++ ++ R+ GH + F+ DGK L+SS D +++W+
Sbjct: 981 EDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN 1031
Score = 41 (19.5 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 633 LFLKIHGETVRCHTKLQD 650
+FL+ H ETV+ LQD
Sbjct: 1038 VFLQAHQETVKDFRLLQD 1055
Score = 38 (18.4 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 554 QLLHSCA 560
QLLHSCA
Sbjct: 1160 QLLHSCA 1166
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 427
+ H + + PN +LA+ D+ + W + F S I+ V
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSVL 238
Query: 428 VKMPSVSSVEGCQD 441
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 139 (54.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 232 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 290 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 349 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 405
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 406 NRC 408
RC
Sbjct: 262 ERC 264
Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+ L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWD 133
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 129
G + R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 134 I-RRKGC--VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 46 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 105
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 106 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 154
Score = 117 (46.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 43 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 100
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 101 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Score = 103 (41.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 87 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 144
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 145 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 200
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 201 KECKAELREHEHVVE 215
Score = 89 (36.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 217 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 274
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 275 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 334
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 335 VDQTVKVWE 343
Score = 75 (31.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 42 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 97
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 98 KLLASCSADMTIKLW 112
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 243 GPFLLSGSRDKTIKMWDV 260
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 119 (46.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVL 61
G V A+ FS G LLA+G + +W + R + + NA I S+ F + L
Sbjct: 323 GEVNAVQFSP-GSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYL 381
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D + ++W D D RL +GHS L +F + I+S DR +L+ +
Sbjct: 382 LAASNDFASRIWTVD----DNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Score = 94 (38.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 41/162 (25%), Positives = 72/162 (44%)
Query: 257 GVACDS---TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVAD 313
G +C+ T ++S + I+ WD + + E+ + + + L T +
Sbjct: 450 GSSCNDIVCTEQCVMSGHFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSR 509
Query: 314 DLVIRLFD--VVALRMVRKFEGHT--DRITDFCFSEDGKWLLSSGMDGSLRIWDVI---L 366
D ++++ D V A++ +G T FS DG ++ + DG+L +W+V+ L
Sbjct: 510 DDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKL 569
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHV---DQ-NGVYLW 404
R + A H I A++ SP A AHV D+ N LW
Sbjct: 570 ERTL-AKHHSSPINAVAWSP-----AGAHVVSVDKGNKAVLW 605
Score = 85 (35.0 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+AHD + ++ F +L + D +K+W +P+ SG +A I F +
Sbjct: 319 DAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPK--GSLSGSNAGITSIEFDS 376
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 137
G ++L+A D A R+++V D + R H K
Sbjct: 377 AGSYLLAASNDFASRIWTV-DDNRLRHTLTGHSGK 410
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 148 (57.2 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 49/206 (23%), Positives = 93/206 (45%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ +S+ G FA+ G+ G + ++L +G S ++ H +V+ VA + N
Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFV--------GHTKDVLSVAFSTDN 117
Query: 265 TLMISAGYHGDIKVWDFKGRDLK---SRWEVGCSLVKIVYHRVNGLLATVAD---DLVIR 318
++SA IK+W+ G + K S + V V N L+ T+ D ++
Sbjct: 118 RQIVSASRDRTIKLWNTLG-ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 378
++++ ++ GH+ + S DG S G DG + +WD+ +++ ++
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI 236
Query: 379 ITALSLSPNMDVLATAHVDQNGVYLW 404
I +L SPN L A +N + +W
Sbjct: 237 IHSLCFSPNRYWLCAA--TENSIRIW 260
Score = 104 (41.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 252 NGEVVGVACD--STNTLM---ISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG 306
+G V+C S NTL+ +SA + +KVW+ + L++ + V +G
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDG 205
Query: 307 -LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
L A+ D VI L+D+ + + E + I CFS + WL ++ + S+RIWD+
Sbjct: 206 SLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAA-TENSIRIWDLE 263
Query: 366 LARQIDAIHVDVSITA 381
++ + VD+ A
Sbjct: 264 SKSVVEDLKVDLKAEA 279
Score = 102 (41.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKR-RLQSVIRE---AHDNAIISLHFFANEPV 60
VTA+A D ++ + + I +W L K + V + H + + + ++
Sbjct: 18 VTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQF 77
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+S S D +++W T + R + GH+ L + F + R I+SA +DR +L++
Sbjct: 78 ALSGSWDGELRLWDLATGESTRRFV----GHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 121 VI 122
+
Sbjct: 134 TL 135
Score = 64 (27.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 57 NEPVLMSASADNSIKMWIFDTTDGDPRLLRFR-SGHSAPPLCIRFYANGRHILSAGQDRA 115
N V++++S D SI +W D + + R +GHS + ++G+ LS D
Sbjct: 27 NSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGE 86
Query: 116 FRLFSVIQDQQSR 128
RL+ + + +R
Sbjct: 87 LRLWDLATGESTR 99
Score = 53 (23.7 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 339 TDFCFSEDGKWLLSSGMDGSLRIWDV 364
T +S DG L S DG +R+W +
Sbjct: 298 TSLNWSADGNTLFSGYTDGVIRVWGI 323
Score = 53 (23.7 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 242 DMSE-RSNYA-HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL 286
D++E + Y+ G ++ C S N + A I++WD + + +
Sbjct: 221 DLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSV 267
Score = 37 (18.1 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 7/33 (21%), Positives = 21/33 (63%)
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 135
N I+++ +D++ L+ + ++ +S ++QR +
Sbjct: 27 NSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRM 59
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 53/206 (25%), Positives = 90/206 (43%)
Query: 202 PTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGE-VVGVAC 260
P + S C + + G G I +++++G +E++ A NG+ + +A
Sbjct: 127 PVDLWTVQFSPCNKYVISGLNDGKISMYSVETG--------KAEQTLDAQNGKYTLSIAY 178
Query: 261 DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVIRL 319
+ S G I ++D + E V+ + N LL T +DD ++L
Sbjct: 179 SPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKL 238
Query: 320 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID--AIHVDV 377
+DV +V GH + FSEDGK SS D S++IWD + + A H D
Sbjct: 239 YDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTD- 297
Query: 378 SITALSLSPNMDVLATAHVDQN-GVY 402
+ + SP D +A+A D++ +Y
Sbjct: 298 QVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 35/113 (30%), Positives = 67/113 (59%)
Query: 7 ALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASA 66
++A+S DG+ +ASGA G+I+I+++ ++ + E H + SL F N +L++AS
Sbjct: 175 SIAYSPDGK-YIASGAIDGIITIFDVAAGKVVQTL-EGHAMPVRSLCFSPNSQLLLTASD 232
Query: 67 DNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
D +K+ +D T D ++ SGH++ LC+ F +G+H S+ D + +++
Sbjct: 233 DGHMKL--YDVTHSD--VVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIW 281
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 255 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVG-CSLVKIVYHRVNGLLATVAD 313
VV VA S + S+ + +WD + D K G L + + N + + +
Sbjct: 88 VVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLN 147
Query: 314 DLVIRLFDVVALRMVRKFEGHTDRIT-DFCFSEDGKWLLSSGMDGSLRIWDVILARQIDA 372
D I ++ V + + + + T +S DGK++ S +DG + I+DV + +
Sbjct: 148 DGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQT 207
Query: 373 I--HVDVSITALSLSPNMDVLATAHVD 397
+ H + + +L SPN +L TA D
Sbjct: 208 LEGHA-MPVRSLCFSPNSQLLLTASDD 233
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/194 (22%), Positives = 85/194 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 427
+ H + + PN +LA+ D+ + W + F S I+ +
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSIL 238
Query: 428 VKMPSVSSVEGCQD 441
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 140 (54.3 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 232 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 290 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 349 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 405
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 406 NRC 408
RC
Sbjct: 262 ERC 264
Score = 131 (51.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 15 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 74
+ L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWD 133
Query: 75 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 129
G + R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 134 I-RRKGC--VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/155 (28%), Positives = 67/155 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 307
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 16 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLL 75
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 76 LFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSC 135
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 402
+ + V S+ A L P V + V G+Y
Sbjct: 136 QATRTVPVFESVEAAVLLPEEPV-SQLGVKSPGLY 169
Score = 131 (51.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ ++A + + + LLA+G+ +W L + +L V H + + F + VL +A
Sbjct: 371 INSVAIAPNDK-LLATGSQDRTAKLWALPQCQLLGVF-SGHRRGLWCVQFSPMDQVLATA 428
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SAD +IK+W D L+ GH A L + F + G +LS+G D +L+++ +
Sbjct: 429 SADGTIKLWALQ----DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNN 484
Query: 125 QQSREL 130
+ R L
Sbjct: 485 ECVRTL 490
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 42/171 (24%), Positives = 73/171 (42%)
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SL 296
G L ++ + H+ ++ VA + L+ + K+W L + L
Sbjct: 354 GPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGL 413
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ + ++ +LAT + D I+L+ + ++ FEGH + F G LLSSG D
Sbjct: 414 WCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSD 473
Query: 357 GSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
G +++W + R +DA H D + L S +D A + V LW
Sbjct: 474 GLVKLWTIKNNECVRTLDA-HED-KVWGLHCS-RLDDHALTGASDSRVILW 521
Score = 98 (39.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 3 GAVTALAFSSDGQPLLA-SGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G V +AF D LL S A+ I +W+L+ R +V+ AH +A+ SL F A+ +
Sbjct: 60 GVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLT-AHYSAVTSLAFSADGHTM 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSA---P--PLC-IRFYANGRHILSAGQDRA 115
+S+ D +W + + F S +A P P+ + + G + L+AG
Sbjct: 119 LSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGT 178
Query: 116 FRLFSVIQDQ 125
R++ Q
Sbjct: 179 LRVWEAASGQ 188
Score = 92 (37.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 61
V +AF LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 20 VATMAFDPTST-LLATGGCDGAVRVWDIVRHYGTHHFRGSP--GVVHLVAFHPDPTRLLL 76
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S++ D +I++W D L + H + + F A+G +LS+G+D+ +
Sbjct: 77 FSSATDAAIRVWSLQ----DRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK----ICI 128
Query: 122 IQDQQS 127
I D QS
Sbjct: 129 IWDLQS 134
Score = 90 (36.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 41/178 (23%), Positives = 87/178 (48%)
Query: 262 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEV---GCSLVKIVYHRVNGLLATVADDLVI 317
S ++AG G ++VW+ G+ + ++ + G L G++ T D +
Sbjct: 165 SPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNL 224
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIH 374
L++ +LR+ ++F G+++ + D F ED +++S L+++++ A QI H
Sbjct: 225 LLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSP-CLKVFELQTSACQILHGH 283
Query: 375 VDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNI-DSY-ASGKEIVSVKM 430
D+ + AL + + A+ DQ+ V +W R +G + +S+ +G + +VK+
Sbjct: 284 TDI-VLALDVFRKGWLFASCAKDQS-VRIW--RMNKAGQVMLKESFLVTGSQDCTVKL 337
Score = 54 (24.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 13 DGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKM 72
D ++AS +S + ++ L+ Q I H + +++L F + S + D S+++
Sbjct: 255 DSHVVVAS--NSPCLKVFELQTSACQ--ILHGHTDIVLALDVFRKGWLFASCAKDQSVRI 310
Query: 73 W 73
W
Sbjct: 311 W 311
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 118 (46.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 41/152 (26%), Positives = 67/152 (44%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +H + + T + D RL+DV VR F GHT +T + DG + S+ +G
Sbjct: 469 VTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGL 528
Query: 359 LRIWDVILARQIDAIHVDV-SITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID 417
+ +WD+ R+I + +I +LS S VL + D V W +F +N +
Sbjct: 529 IHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCT-VRAWD---VFK--TNYN 582
Query: 418 SYASGKEIVSVKMPSVSSVEGCQDEN-SSQPD 448
+ S SV P + + N S+ PD
Sbjct: 583 NPVSSSLTGSVVTPFSAKTSTFNEVNWSTSPD 614
Score = 95 (38.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V FS D + LL+ + +W+++ + V + H + + F
Sbjct: 380 GPVYGTTFSPDNKYLLSCSEDASA-RLWSVDTKTAL-VAYKGHTGPVWDVAFGPFGHYFA 437
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+AS D + ++W D P LR +GH + C+ F+ N ++L+ D+ RL+ V
Sbjct: 438 TASHDQTAQLWSCDHIY--P--LRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
Score = 87 (35.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 10 FSSDGQPLLASGASSGVISIWNL--EKRRLQ----------SVIREAHDNAIISLHFFAN 57
FS D ++A G I +W++ +K+ L SV +H + F +
Sbjct: 332 FSPDST-MIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPD 390
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
L+S S D S ++W DT L+ ++ GH+ P + F G + +A D+ +
Sbjct: 391 NKYLLSCSEDASARLWSVDTKTA---LVAYK-GHTGPVWDVAFGPFGHYFATASHDQTAQ 446
Query: 118 LFS 120
L+S
Sbjct: 447 LWS 449
Score = 71 (30.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 46 DNAIISLHFFANEPVLMSASADN-SI-KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 103
D+ +I+ F + L S AD S+ K + +DG RLL HS P F +
Sbjct: 335 DSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLL----SHSGPVYGTTFSPD 390
Query: 104 GRHILSAGQDRAFRLFSV 121
+++LS +D + RL+SV
Sbjct: 391 NKYLLSCSEDASARLWSV 408
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 124 (48.7 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 34/108 (31%), Positives = 52/108 (48%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +H + + T + D +R++ V VR F GHT IT S DGK L S+ GS
Sbjct: 409 VCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGS 468
Query: 359 LRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ +WD+ R + + H I +LS S +VL + D V +W
Sbjct: 469 ILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGT-VRVW 515
Score = 98 (39.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 24/104 (23%), Positives = 47/104 (45%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
L S ++ I +W+L+ + V+ + HD + L + +S D + ++W+ D
Sbjct: 334 LLSSSADRTIRLWSLDLWQCM-VVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDH 392
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
R R GH C+ F+ N ++ + DR R+++V
Sbjct: 393 I----RQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAV 432
Score = 86 (35.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
LA+ D I L+D+ R++++ GH I +S + L+S G DG++R+WDV+
Sbjct: 460 LASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDVM 518
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKS-RWEVGCSLVKIVYHRVNGLL 308
H G + +AC + SA HG I +WD GR LK R + + + + +L
Sbjct: 444 HTGNITALACSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVL 503
Query: 309 ATVADDLVIRLFDVV 323
+ D +R++DV+
Sbjct: 504 VSGGADGTVRVWDVM 518
Score = 75 (31.5 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L+S+SAD +I++W D + + GH P +++ G + +S G D+ RL+
Sbjct: 334 LLSSSADRTIRLWSLDLW----QCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWV 389
Query: 121 VIQDQQSR 128
+Q R
Sbjct: 390 TDHIRQQR 397
Score = 55 (24.4 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 39
+ L FS D L+A+G I +W+L+ +++ S
Sbjct: 256 INCLDFSDDNL-LVAAGMQESYIRVWSLDGKKIPS 289
Score = 51 (23.0 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 76 DTTDGDPRLLRFRSGHSAPPLCIRFY------------ANGRHILSAGQDRAFRLFSV 121
D+ D P R GHS P + F N R +LS+ DR RL+S+
Sbjct: 291 DSADEPPTNSRRLIGHSGPVYAVAFAPSATPSENAVAPTNARWLLSSSADRTIRLWSL 348
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 257 GVAC-D-STNTLMISAGYHGD-IKVWDFKGRDLKS 288
G+ C D S + L+++AG I+VW G+ + S
Sbjct: 255 GINCLDFSDDNLLVAAGMQESYIRVWSLDGKKIPS 289
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/160 (22%), Positives = 78/160 (48%)
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVN 305
S Y H+ + V D++ L+ + G IK+WD + + +++ + + + +H
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 306 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
A+ + D ++++D+ + ++GHT + F+ DG+W++S G D +++WD+
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
Query: 366 LARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + + I +L P+ +LAT D+ V W
Sbjct: 174 AGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRT-VKFW 212
Score = 131 (51.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RG V L F+ DG+ + SG ++ +W+L +L + + +H+ I SL F +E +L
Sbjct: 144 RG-VNVLRFTPDGR-WVVSGGEDNIVKVWDLTAGKLLTEFK-SHEGQIQSLDFHPHEFLL 200
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+ SAD ++K W +T + L+ +A C+ F +G+ +L G + ++FS
Sbjct: 201 ATGSADRTVKFWDLETFE----LIGSGGPETAGVRCLSFNPDGKTVL-CGLQESLKIFS 254
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 119 (46.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 59/236 (25%), Positives = 99/236 (41%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGD--IKVWDFKGRDLKSRWEVGCSLVKIVYH 302
ER H +V V +++S IK+WD K + S V +
Sbjct: 264 ERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKW 323
Query: 303 RVNG-LLATVADDLVIRLFDVVALRM-VRKFEGHTDRITDFCFSEDGKWLL-SSGMDGSL 359
NG L T + D +++LFD+ LR V+ F GH + + + L S G DGS+
Sbjct: 324 NDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSI 383
Query: 360 RIWDVILARQIDAIHV--DVSITALSLSPNMDVLATAHVDQNGVYLWV-NRCMFSGDSNI 416
W+V ++I + D + L+ P +L + D + W NR GD
Sbjct: 384 LFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHT-IKFWTRNR---PGDLMR 439
Query: 417 DSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDL 472
D Y ++ S+++++ C+ +++ P + DRV + + L K IP L
Sbjct: 440 DKYN-----LNTLPASLAALDECEYDDAIIPGMGPEDRV-EFTESLTADKGFIPGL 489
Score = 96 (38.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 28/130 (21%), Positives = 62/130 (47%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
MR + LA++ +G+ L+ +GASSG ++WN ++++ +AHD ++ ++ + N+
Sbjct: 145 MRCPIFTLAWTPEGRRLV-TGASSGEFTLWNGLTFNFETIL-QAHDISVRTMVWSHNDSW 202
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+++ +K W + + ++ H I F +S D R++
Sbjct: 203 MVTGDHGGYVKYWQSNMNN-----VKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWD 257
Query: 121 VIQDQQSREL 130
++ Q+ R L
Sbjct: 258 FMRCQEERVL 267
Score = 91 (37.1 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 23/96 (23%), Positives = 44/96 (45%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+ +G G + W ++ + +AH AI + F + +S S D ++++W F
Sbjct: 203 MVTGDHGGYVKYWQSNMNNVK--MYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMR 260
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+ R+LR GH A C+ ++ I+S +D
Sbjct: 261 CQ-EERVLR---GHGADVKCVHWHPQKGMIVSGSKD 292
>FB|FBgn0004623 [details] [associations]
symbol:Gbeta76C "G protein beta-subunit 76C" species:7227
"Drosophila melanogaster" [GO:0016059 "deactivation of rhodopsin
mediated signaling" evidence=IMP;TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=NAS;IMP] [GO:0007602 "phototransduction"
evidence=IDA;IMP] [GO:0016028 "rhabdomere" evidence=IDA;TAS]
[GO:0005834 "heterotrimeric G-protein complex"
evidence=NAS;IDA;IPI] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=NAS] [GO:0007202 "activation of
phospholipase C activity" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007601
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0007202 GO:GO:0016028 GO:GO:0016056
PRINTS:PR00319 GO:GO:0016059 GO:GO:0005834
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K07972 EMBL:M76593 EMBL:AY118886 PIR:JU0269 RefSeq:NP_523720.2
UniGene:Dm.9760 ProteinModelPortal:P29829 SMR:P29829 IntAct:P29829
MINT:MINT-938155 STRING:P29829 PaxDb:P29829
EnsemblMetazoa:FBtr0074949 GeneID:40148 KEGG:dme:Dmel_CG8770
CTD:40148 FlyBase:FBgn0004623 InParanoid:P29829 OMA:KGHINKV
OrthoDB:EOG4SJ3W9 PhylomeDB:P29829 ChiTaRS:Gbeta76C
GenomeRNAi:40148 NextBio:817248 Bgee:P29829 GermOnline:CG8770
Uniprot:P29829
Length = 346
Score = 138 (53.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 40/161 (24%), Positives = 73/161 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLL 308
H G++ G++ I+ K+WD + K + G + + YH
Sbjct: 189 HAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQMF-FGHDMDVSSVCYHPSGFGF 247
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDR--ITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
A+ ++D R++D+ A + + ++E T S G++L+ G++G++ WD +
Sbjct: 248 ASCSEDQTARMYDLRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMK 307
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWV 405
R + H + IT +SL PN LA+ DQ V LW+
Sbjct: 308 QRHTGTLSGHEN-RITCISLCPNGMCLASTSWDQQ-VRLWL 346
Score = 65 (27.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 31 NLEKRRLQSV-IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT-TDGDPRLLRFR 88
++ K R S I + H N + S+HF + ++ S D + +W DT T +++ R
Sbjct: 43 DVPKIRFSSKKILKGHINKVNSVHFAGDSRHCVTGSLDGKLIIW--DTWTANKVQIIPLR 100
Query: 89 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S A + + F +G + G D ++ V
Sbjct: 101 S---AWVMTVAFSPSGNFVACGGMDNQCTVYDV 130
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 146 (56.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 48/206 (23%), Positives = 93/206 (45%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ +S+ G FA+ G+ G + ++L +G + ++ H +V+ VA + N
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFV--------GHTKDVLSVAFSTDN 117
Query: 265 TLMISAGYHGDIKVWDFKGRDLK---SRWEVGCSLVKIVYHRVNGLLATVAD---DLVIR 318
++SA IK+W+ G + K S + V V N L+ T+ D ++
Sbjct: 118 RQIVSASRDRTIKLWNTLG-ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 378
++++ ++ GH+ + S DG S G DG + +WD+ +++ ++
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI 236
Query: 379 ITALSLSPNMDVLATAHVDQNGVYLW 404
I +L SPN L A +N + +W
Sbjct: 237 IHSLCFSPNRYWLCAA--TENSIRIW 260
Score = 104 (41.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 252 NGEVVGVACD--STNTLM---ISAGYHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRV 304
+G V+C S NTL+ +SA + +KVW+ + L++ VG S L +
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSL-VGHSGYLNTVAVSPD 204
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
L A+ D VI L+D+ + + E + I CFS + WL ++ + S+RIWD+
Sbjct: 205 GSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAA-TENSIRIWDL 262
Query: 365 ILARQIDAIHVDVSITA 381
++ + VD+ A
Sbjct: 263 ESKSVVEDLKVDLKSEA 279
Score = 101 (40.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKR-RLQSVIRE---AHDNAIISLHFFANEPV 60
VTA+A D ++ + + I +W L K + V + H + + + ++
Sbjct: 18 VTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQF 77
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+S S D +++W D G+ RF GH+ L + F + R I+SA +DR +L++
Sbjct: 78 ALSGSWDGELRLW--DLATGETTR-RF-VGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 121 VI 122
+
Sbjct: 134 TL 135
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 23/94 (24%), Positives = 46/94 (48%)
Query: 37 LQSVIREAHDNAIISLHF-FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFR-SGHSAP 94
L+ ++R AH + + ++ N ++++AS D SI +W D + + R +GHS
Sbjct: 7 LKGIMR-AHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHF 65
Query: 95 PLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 128
+ ++G+ LS D RL+ + + +R
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLATGETTR 99
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 242 DMSE-RSNYA-HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL 286
D++E + Y+ G ++ C S N + A I++WD + + +
Sbjct: 221 DLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSV 267
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 339 TDFCFSEDGKWLLSSGMDGSLRIWDV 364
T +S DG L S DG +R+W +
Sbjct: 298 TSLNWSADGSTLFSGYTDGVVRVWGI 323
Score = 44 (20.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 135
N I++A +D++ L+ + +D +S ++QR +
Sbjct: 27 NSDIIVTASRDKSIILWKLTKDDKSYGVAQRRL 59
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/157 (31%), Positives = 71/157 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H+GEV A +++A G + VW K L R VK +G L+A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D IRL+DV + + +GH + FS D K L S G D +W+V R+
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + H D SI + SP D LAT D V++W
Sbjct: 145 VHLLVGHCD-SIQSSDFSPTSDSLATGSWDST-VHIW 179
Score = 106 (42.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V AFS DG+ LL + + G + +W + RL + H + S F + ++
Sbjct: 27 GEVNCSAFSPDGRTLLTA-SDDGCVYVWGTKSGRLLWRLA-GHRGPVKSCCFSPDGRLIA 84
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 114
S+S+D+SI++W D + L GH + F + + + S G D+
Sbjct: 85 SSSSDHSIRLW--DVARS--KCLHVLKGHQRSVETVSFSPDSKQLASGGWDK 132
Score = 89 (36.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 35/180 (19%), Positives = 79/180 (43%)
Query: 222 AGGWIER---FNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKV 278
+GGW +R + +QSG R +L + H + T+ + + + + +
Sbjct: 127 SGGWDKRAIVWEVQSG--RRVHLLVG------HCDSIQSSDFSPTSDSLATGSWDSTVHI 178
Query: 279 WDFKGRDLKSRW---EVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHT 335
WD + + E + + + +GLLA+ + D I ++ + + +GHT
Sbjct: 179 WDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHT 238
Query: 336 DRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIH--VDVSITALSLSPNMDVLAT 393
+ FS D L S+G ++++WD + + ++ + +DV+ + +P+ +L +
Sbjct: 239 IWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACI-FTPDGKLLVS 297
Score = 84 (34.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RG V + FS DG+ L+AS +S I +W++ + + V++ H ++ ++ F + L
Sbjct: 68 RGPVKSCCFSPDGR-LIASSSSDHSIRLWDVARSKCLHVLK-GHQRSVETVSFSPDSKQL 125
Query: 62 MSASADNSIKMW 73
S D +W
Sbjct: 126 ASGGWDKRAIVW 137
Score = 78 (32.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + F + L++AS D + +W T G RLL +GH P F +G
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVW--GTKSG--RLLWRLAGHRGPVKSCCFSPDG 80
Query: 105 RHILSAGQDRAFRLFSVIQDQ 125
R I S+ D + RL+ V + +
Sbjct: 81 RLIASSSSDHSIRLWDVARSK 101
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 47/204 (23%), Positives = 89/204 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 309
H V V +LM+SA IKVWD++ D + + V+ I + + LLA
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLA 166
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D+ I+L+D +R GH ++ +G ++S+ D ++++W+V
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYC 226
Query: 370 IDAIHVDVSITALSLSPNMD--VLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 427
+ + + PN D +LA+ DQ V +WV + + + E +S
Sbjct: 227 VKTFTGHREWVRM-VRPNQDGTLLASCSNDQT-VRVWVVATK-ECKAELREHEHVVECIS 283
Query: 428 ----VKMPSVSSVEGCQDENSSQP 447
P++S G +++ S +P
Sbjct: 284 WAPESAHPTISEATGSENKKSGKP 307
Score = 120 (47.3 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F L+ S + I +W+ E + ++ H +++ + F +L
Sbjct: 108 RSPVTRVIFHPVFS-LMVSASEDATIKVWDYEAGDFERTLK-GHTDSVQDISFDQTGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV 221
Score = 98 (39.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDQTGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D ++KMW + G ++ +GH +R +G + S D+ R++ V
Sbjct: 210 ASRDKTMKMW--EVATG--YCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 86 (35.3 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 22/100 (22%), Positives = 50/100 (50%)
Query: 267 MISAGYHGDIKVWDFK-GRDLKSRWEVGC-SLVK-IVYHRVNGLLATVADDLVIRLFDVV 323
++S IK+WD G L + VG + V+ +++H + + ADD +R++D
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTL--VGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYK 368
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
R ++ H +T F + ++++ +D ++++W+
Sbjct: 369 NKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 52 (23.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 13/72 (18%), Positives = 34/72 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H+ V GV ++S +++WD+K R +K+ + + +H+ + +
Sbjct: 337 HDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVV 396
Query: 310 TVADDLVIRLFD 321
T + D +++++
Sbjct: 397 TGSVDQTVKVWE 408
Score = 47 (21.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDI 325
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 140 (54.3 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 44/155 (28%), Positives = 67/155 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 307
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 168 LFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSC 227
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 402
+ + V S+ A L P V + V G+Y
Sbjct: 228 QATRTVPVFESVEAAVLLPEEPV-SQLGVKSPGLY 261
Score = 131 (51.2 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ ++A + + + LLA+G+ +W L + +L V H + + F + VL +A
Sbjct: 482 INSVAIAPNDK-LLATGSQDRTAKLWALPQCQLLGVF-SGHRRGLWCVQFSPMDQVLATA 539
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SAD +IK+W D L+ GH A L + F + G +LS+G D +L+++ +
Sbjct: 540 SADGTIKLWALQ----DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNN 595
Query: 125 QQSREL 130
+ R L
Sbjct: 596 ECVRTL 601
Score = 116 (45.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 42/171 (24%), Positives = 73/171 (42%)
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SL 296
G L ++ + H+ ++ VA + L+ + K+W L + L
Sbjct: 465 GPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGL 524
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ + ++ +LAT + D I+L+ + ++ FEGH + F G LLSSG D
Sbjct: 525 WCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSD 584
Query: 357 GSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
G +++W + R +DA H D + L S +D A + V LW
Sbjct: 585 GLVKLWTIKNNECVRTLDA-HED-KVWGLHCS-RLDDHALTGASDSRVILW 632
Score = 98 (39.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 3 GAVTALAFSSDGQPLLA-SGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G V +AF D LL S A+ I +W+L+ R +V+ AH +A+ SL F A+ +
Sbjct: 152 GVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLT-AHYSAVTSLAFSADGHTM 210
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSA---P--PLC-IRFYANGRHILSAGQDRA 115
+S+ D +W + + F S +A P P+ + + G + L+AG
Sbjct: 211 LSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGT 270
Query: 116 FRLFSVIQDQ 125
R++ Q
Sbjct: 271 LRVWEAASGQ 280
Score = 92 (37.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 61
V +AF LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 112 VATMAFDPTST-LLATGGCDGAVRVWDIVRHYGTHHFRGSP--GVVHLVAFHPDPTRLLL 168
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S++ D +I++W D L + H + + F A+G +LS+G+D+ +
Sbjct: 169 FSSATDAAIRVWSLQ----DRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK----ICI 220
Query: 122 IQDQQS 127
I D QS
Sbjct: 221 IWDLQS 226
Score = 91 (37.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 43/193 (22%), Positives = 89/193 (46%)
Query: 262 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEV---GCSLVKIVYHRVNGLLATVADDLVI 317
S ++AG G ++VW+ G+ + ++ + G L G++ T D +
Sbjct: 257 SPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNL 316
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIH 374
L++ +LR+ ++F G+++ + D F ED +++S L+++++ A QI H
Sbjct: 317 LLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSP-CLKVFELQTSACQILHGH 375
Query: 375 VDVSITALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSV 428
D+ + AL + + A+ DQ+ V +W +N+ C+ G + S + +
Sbjct: 376 TDI-VLALDVFRKGWLFASCAKDQS-VRIWRMNKAGQVMCVAQGSGHTHSVGT---VCCS 430
Query: 429 KMPSVSSVEGCQD 441
++ V G QD
Sbjct: 431 RLKESFLVTGSQD 443
Score = 67 (28.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 25/132 (18%), Positives = 58/132 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+TA S D + +L + + + +++ W ++ + + + H + ++ F +L +
Sbjct: 69 ITAFDLSPDNE-VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATG 127
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 122
D ++++W G FR L + F+ + +L S+ D A R++S +
Sbjct: 128 GCDGAVRVWDIVRHYGTHH---FRGSPGVVHL-VAFHPDPTRLLLFSSATDAAIRVWS-L 182
Query: 123 QDQQSRELSQRH 134
QD+ + H
Sbjct: 183 QDRSCLAVLTAH 194
Score = 58 (25.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 18/80 (22%), Positives = 37/80 (46%)
Query: 13 DGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKM 72
D ++AS +S + ++ L+ Q I H + +++L F + S + D S+++
Sbjct: 347 DSHVVVAS--NSPCLKVFELQTSACQ--ILHGHTDIVLALDVFRKGWLFASCAKDQSVRI 402
Query: 73 WIFDTTDGDPRLLRFRSGHS 92
W + G + SGH+
Sbjct: 403 WRMNKA-GQVMCVAQGSGHT 421
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVEDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVEDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKT-IKMW 219
Score = 117 (46.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F + +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Score = 100 (40.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 35/135 (25%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
A+ D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 AARDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + + F V++SAS D +IK+W ++T D + R L+ GH+ I F +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDSVQDISFDHSG 162
Query: 105 RHILSAGQDRAFRLF 119
+ + S D +L+
Sbjct: 163 KLLASCSADMTIKLW 177
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 132 (51.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 52/238 (21%), Positives = 96/238 (40%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
V T MDT A +W +Q+ GE + + + + + + GN + G+ + +
Sbjct: 192 VATGSMDTT-AKLWDIQS---GEEVFTLTGHSAEII-SLSFNTSGNRIITGSFDHTVTVW 246
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKS 288
+G R Y + H E+ + +L+++ K+WD G+ + +
Sbjct: 247 EADTG--RKVY------TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVAT 298
Query: 289 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
++ + L+AT + D R+F V K EGH I+ F+ G
Sbjct: 299 LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGN 358
Query: 349 WLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
LL+ D + RIWD + + + H D I + + + D++ T D N +W
Sbjct: 359 RLLTGSSDKTARIWDAQTGQCLQVLEGHTD-EIFSCAFNYKGDIIITGSKD-NTCRIW 414
Score = 73 (30.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 26/121 (21%), Positives = 52/121 (42%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPV--- 60
+T +A + G + +G+ +W+ L ++ E H N + ++ F N P
Sbjct: 95 LTNVALNKSGSCFI-TGSYDRTCKLWDTASGEELHTL--EGHRNVVYAIAF--NNPYGDK 149
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+ + S D + K+W +T FR GH+A +C+ F + + D +L+
Sbjct: 150 IATGSFDKTCKLWSVET---GKCYHTFR-GHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 121 V 121
+
Sbjct: 206 I 206
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 114 (45.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVL 61
G V A+ FS G LLA+G + +W + + + + NA I S+ F + L
Sbjct: 339 GEVNAVQFSP-GSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYL 397
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D + ++W D D RL +GHS L +F + I+S DR +L+ +
Sbjct: 398 LAASNDFASRIWTVD----DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 453
Score = 97 (39.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 257 GVACDS---TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG----LLA 309
G +C+ T ++S + I+ WD + + E+ L KI +N LL+
Sbjct: 465 GSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMEL---LGKITALDLNPERTELLS 521
Query: 310 TVADDLVIRLFD--VVALRMVRKFEGHT--DRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
DDL +++ D + A+R G T FS DG ++ + +GSL IW+V+
Sbjct: 522 CSRDDL-LKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVL 580
Query: 366 LAR--QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ ++ + H SI A++ SP + T V LW
Sbjct: 581 SGKVEKVLSKHHSSSINAVAWSPAGSHVVTVDKGSKAV-LW 620
Score = 85 (35.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFR-SGHSAPPLCIRF 100
+AHD + ++ F +L + D +K+W +F GD + SG +A I F
Sbjct: 335 DAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVF----GDKCEFKGSLSGSNAGITSIEF 390
Query: 101 YANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 137
+ G ++L+A D A R+++V D + R H K
Sbjct: 391 DSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGK 426
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 125 (49.1 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +AF PL SG I +WN ++RR + AH + + ++ F P ++
Sbjct: 52 GPVRGVAFHQQ-MPLFVSGGDDYKIKVWNYKQRRCIFTLL-AHLDYVRTVAFHHEYPWIL 109
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D +I++W + + + + +GH+ +C +F+ I+SA D+ R++ +
Sbjct: 110 SASDDQTIRIWNWQSRN----CICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDI 164
Score = 91 (37.1 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 32/119 (26%), Positives = 52/119 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V +AF + P + S + I IWN + R V+ H++ ++ F E ++SA
Sbjct: 96 VRTVAFHHE-YPWILSASDDQTIRIWNWQSRNCICVLT-GHNHYVMCAQFHPTEDQIVSA 153
Query: 65 SADNSIKMWIF------DTTDGDPRLLRFRSGH-SAPPLCIRFYANGRHILSAGQDRAF 116
S D ++++W + G L GH A L + A +H+L G DR F
Sbjct: 154 SLDQTVRVWDISGLRKKNVAPGPGGLDDHLKGHPGATDLFGQADAVVKHVLE-GHDRGF 211
Score = 86 (35.3 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRM--VRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+H L+ + ADD +++L+ + + V GH + ++ F +LS+G D S
Sbjct: 216 FHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHPRQDLILSNGEDRS 275
Query: 359 LRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAH 395
+R+WD+ + + D L+ P +++ A H
Sbjct: 276 IRVWDMTKRQCLFTFRRDNERFWILTAHPTLNLFAAGH 313
Score = 86 (35.3 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 29/116 (25%), Positives = 47/116 (40%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V L+F +P + SGVI +W+ L E HD + + F P+ +S
Sbjct: 12 VKGLSFHPK-RPWILVSLHSGVIQLWDYRMHTLLEKFDE-HDGPVRGVAFHQQMPLFVSG 69
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
D IK+W + R + H + F+ ILSA D+ R+++
Sbjct: 70 GDDYKIKVWNYKQR----RCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWN 121
Score = 62 (26.9 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 25/121 (20%), Positives = 56/121 (46%)
Query: 263 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVG-C-----SLVKIVYHRVNGLLATVADDLV 316
T L++S +K+W + + K+ WEV C ++ +++H L+ + +D
Sbjct: 219 TLPLIVSGADDRLVKLW--RMNEYKA-WEVDTCRGHYNNVSSVLFHPRQDLILSNGEDRS 275
Query: 317 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD 376
IR++D+ + + F +R + L ++G DG + ++ + R A+H +
Sbjct: 276 IRVWDMTKRQCLFTFRRDNERFW-ILTAHPTLNLFAAGHDGGMVVFKLERERPAYAVHGN 334
Query: 377 V 377
+
Sbjct: 335 I 335
Score = 52 (23.4 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 543 TKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRP 602
TK D +Q QLL CAE K + STL+ + R+ ++ + H +L
Sbjct: 1053 TKLDAAEAQ--QLLRICAEYIVGLKMETVRKGMPKSTLEEQKRLCEMAAYFTHCKLQPVH 1110
Query: 603 EYLSIELLLDYLIHEISCRNNFEFIQAVIRL 633
+ L++ L+ + + F + ++ L
Sbjct: 1111 QILTLRTALNMFFKLKNYKTAASFARRLLEL 1141
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 156 (60.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V C IS+ G +A+ + W + L +S G + R+ H +V+ V+ + N
Sbjct: 66 VSDCVISSDGAYAL---SASWDKSLRLWE-LSSGQ----TTRTFVGHTNDVLSVSFSADN 117
Query: 265 TLMISAGYHGDIKVWDFKGRDLK--------SRWEVGCSLVKIVYHRVNGLLATVADDLV 316
++S IK+W+ G D K + W V C V+ + N ++ + D +
Sbjct: 118 RQIVSGSRDRTIKLWNTLG-DCKYTITDKGHTEW-VSC--VRFSPNPQNPVIVSAGWDKL 173
Query: 317 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD 376
++++++ + R+ GHT I S DG S G DG +WD+ ++ + ++H
Sbjct: 174 VKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAG 233
Query: 377 VSITALSLSPNMDVLATA 394
I AL SPN L A
Sbjct: 234 DEIHALVFSPNRYWLCAA 251
Score = 124 (48.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIR---EAHDNAIISLHFFANE 58
G VT+LA S + +L SG+ + IWNL + + + E H + + ++
Sbjct: 16 GWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDG 75
Query: 59 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 118
+SAS D S+++W + + G + R GH+ L + F A+ R I+S +DR +L
Sbjct: 76 AYALSASWDKSLRLW--ELSSG--QTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKL 131
Query: 119 FSVIQD 124
++ + D
Sbjct: 132 WNTLGD 137
Score = 59 (25.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 29/131 (22%), Positives = 48/131 (36%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHR 303
+ + H G + V +L S G G +WD + + L S G + +V+
Sbjct: 185 QTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSL-HAGDEIHALVFSP 243
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFE------GHTDR---ITDFCFSEDGKWLLSSG 354
N A I +FD+ V + + G R +S DG+ L +
Sbjct: 244 -NRYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGY 302
Query: 355 MDGSLRIWDVI 365
D +R W V+
Sbjct: 303 TDNKIRAWGVM 313
Score = 43 (20.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 636 KIHGETVRCHTKLQDKARKLLEVQSAVWQKIDKMFQSARC 675
K H E V C + + + V SA W K+ K+++ A C
Sbjct: 145 KGHTEWVSC-VRFSPNPQNPVIV-SAGWDKLVKVWELASC 182
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 156 (60.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR-VNGL- 307
H V + DST+TL+ + G IK+WD + + +V +V +H ++ L
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 168
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L + + D IR++D+ + + V +GH +T F+ DG L+SSG D +W++
Sbjct: 169 LFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTR 228
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 402
I I + S+ A L P + V + G++
Sbjct: 229 ESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLH 263
Score = 120 (47.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 240 YLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDI-KVWDFKGRDLKSRWEVGCSLVK 298
+ M+ER H+ ++ VA S N +I+ G + K+W L + +
Sbjct: 481 HAQMTERG---HDKDINSVAV-SPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIW 536
Query: 299 IV-YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
V + V+ +LAT + D ++L+ + ++ FEGH + F G LLS G DG
Sbjct: 537 CVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDG 596
Query: 358 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
L++W + + + H D I L + D++ TA D + + LW
Sbjct: 597 LLKLWTIKTNECVKTLDGHED-KIWGLHTNKQDDMVVTASSDSS-ITLW 643
Score = 93 (37.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVLMS 63
V + F S LLA+G I IW++ K+ ++ + ++ H + L S
Sbjct: 113 VATMVFDSTST-LLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFS 171
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 114
+S D I++W +++ + + GH + + F A+G ++S+G+D+
Sbjct: 172 SSMDYKIRIWDLNSS----KCVAVLDGHFSAVTSLAFTADGNTLISSGRDK 218
Score = 81 (33.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSV-IREAHDNAII 50
AVT+LAF++DG L++SG + +WNL+ R ++++ I E+ + A++
Sbjct: 198 AVTSLAFTADGNTLISSGRDK-ICMVWNLKTRESIRTIPIYESVEAAVL 245
Score = 75 (31.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+T+ S D + +L +G+ + ++ WN + R + H + ++ F + +L +
Sbjct: 70 ITSFVLSPDDE-VLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATG 128
Query: 65 SADNSIKMW 73
D++IK+W
Sbjct: 129 GCDSTIKIW 137
Score = 62 (26.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 25/127 (19%), Positives = 53/127 (41%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V + F G + +S + ++ L Q I H I++L F + +S
Sbjct: 347 VLDVKFLGPGDSHIVVATNSPQLKVFELSTSHCQ--ILYGHTETILALDVFRKGLMFVSC 404
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHS---APPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ D SI++W + DG + GH+ C R + ++++ QD +++++
Sbjct: 405 AKDKSIRVWRMNK-DGRVVCVAQGLGHAHGVGAVSCSRLKES--FVVTSSQDCTIKVWNI 461
Query: 122 IQDQQSR 128
+ S+
Sbjct: 462 PESLTSK 468
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 257 GVACDSTNTL-MISAGYHGDIKVWDFKGRDLKS--RWEVGCSLVKIVYHRVNGLLATVAD 313
GV D N + M S G+ G +K+W F + + + + K+ +H LAT
Sbjct: 314 GVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACY 373
Query: 314 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 373
D RL+D+ V EGH + + DG L++ G+D R+WD+ R I +
Sbjct: 374 DSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFL 433
Query: 374 HVDV-SITALSLSPNMDVLATAHVDQNGVYLW 404
+ ++ + SPN +AT D N +W
Sbjct: 434 EGHLGAVFGVDFSPNGFHIATGSQD-NTCKIW 464
Score = 112 (44.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 39/171 (22%), Positives = 78/171 (45%)
Query: 242 DMSERSNYAHN-GEVVGVAC---DSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 296
D+ +++ H G V C S +++++ G +VWD + GR + E
Sbjct: 381 DLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFL-EGHLGA 439
Query: 297 VKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSED-GKWLLSSG 354
V V NG +AT + D +++D+ + V HT+ I+D + ++ G +L++
Sbjct: 440 VFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCS 499
Query: 355 MDGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D + +IW + + + D + ++ ++PN +AT D+ LW
Sbjct: 500 YDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRT-FKLW 549
Score = 97 (39.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 38/141 (26%), Positives = 73/141 (51%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAI--ISLH--FFANEP- 59
V++ AFS D LL S + SG+ +W++ L+ +R H + + ++L A+E
Sbjct: 264 VSSAAFSEDSSLLLTS-SWSGLCKLWSVPDCELKQTLR-GHASYVGGVALRPGVKADEEN 321
Query: 60 VLMSASA--DNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC-IRFYANGRHILSAGQDRAF 116
V+ AS D ++K+W F+ + + +GH + + F+ +GR + +A D ++
Sbjct: 322 VVAMASGGHDGAVKLWGFNNEESIADI----TGHMPHRVSKVAFHPSGRFLATACYDSSW 377
Query: 117 RLFSVIQDQQSRELSQRHVAK 137
RL+ + +Q++ L Q AK
Sbjct: 378 RLWDL--EQKTEVLHQEGHAK 396
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 116 (45.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F +L
Sbjct: 108 RSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHTGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 102 (41.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHTGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T G ++ +GH +R +G I S D+ R++ V
Sbjct: 210 ASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 295
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTL--VGHDN 339
Query: 296 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 355 MDGSLRIWD 363
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 47 (21.6 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDI 325
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 120 (47.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +H + T + D R++DV VR F GHT + DG+WL + DG
Sbjct: 615 VSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGI 674
Query: 359 LRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ +WD+ +++ + H +I +LS S +VL + D V +W
Sbjct: 675 INVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHT-VRVW 721
Score = 110 (43.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + +FS D + LL SG+ + +W+++ V + H++ + + F
Sbjct: 526 GTVYSTSFSPDNKYLL-SGSEDKTVRLWSMDTHTAL-VSYKGHNHPVWDVSFSPLGHYFA 583
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+AS D + ++W D P LR +GH C+ F+ NG ++ + D+ R++ V
Sbjct: 584 TASHDQTARLWSCDHIY--P--LRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Score = 93 (37.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 17/58 (29%), Positives = 37/58 (63%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
L+T ++D +I ++D+ + +++ GH + I +S++G L+S G D ++R+WD+
Sbjct: 666 LSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
Score = 92 (37.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 32/132 (24%), Positives = 57/132 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS---VIRE-------------AHDNA 48
++ L FS D + + A+G I IW+L+ L + + H
Sbjct: 469 MSCLDFSDDCR-IAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGT 527
Query: 49 IISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL 108
+ S F + L+S S D ++++W DT L+ ++ GH+ P + F G +
Sbjct: 528 VYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTA---LVSYK-GHNHPVWDVSFSPLGHYFA 583
Query: 109 SAGQDRAFRLFS 120
+A D+ RL+S
Sbjct: 584 TASHDQTARLWS 595
Score = 55 (24.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 79 DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
D DP + GHS F + +++LS +D+ RL+S+
Sbjct: 513 DEDPTC-KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSM 554
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 175 (66.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 45/165 (27%), Positives = 79/165 (47%)
Query: 244 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---EVGCSLVKIV 300
S S H V VA +S L+++ G IK+WD + + + CS V+
Sbjct: 50 SPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVE-- 107
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+H LA+ + D +R++D ++ ++GHT I+ FS DG+W++S G+D ++
Sbjct: 108 FHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVK 167
Query: 361 IWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
+WD+ + + + I +L P +LAT D+ V W
Sbjct: 168 VWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRT-VKFW 211
Score = 37 (18.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 416 IDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLV 473
I S S IV V + + +E CQ ++ + R V GL T K Q +LV
Sbjct: 960 IRSTVSAPRIVGVDLHANERLEICQICSAGLHKIQRILPVLARRGGLITRKAQELNLV 1017
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 109 (43.4 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 34/120 (28%), Positives = 65/120 (54%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISLHFFANEPVL 61
G+V L + D + ++ SG+S + +W++E ++++I H A++ L F AN ++
Sbjct: 263 GSVLCLQY--DNRVII-SGSSDATVRVWDVETGECIKTLIH--HCEAVLHLRF-ANG-IM 315
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++ S D SI +W + D + R GH A + F + R+I+SA DR +++S+
Sbjct: 316 VTCSKDRSIAVWDM-VSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSM 372
Score = 98 (39.6 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 261 DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLF 320
D + ++SA IKVW + + + +R L+ + + D IRL+
Sbjct: 352 DFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR-GRLVVSGSSDNTIRLW 410
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSIT 380
D+ + +R EGH + + C D K ++S DG +++WD+ A A+ ++ +
Sbjct: 411 DIHSGVCLRVLEGHEELVR--CIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLC 468
Query: 381 AL 382
+L
Sbjct: 469 SL 470
Score = 86 (35.3 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 29/118 (24%), Positives = 59/118 (50%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+ SG I IW+ K S I H +++ L + + V++S S+D ++++W +T
Sbjct: 235 IVSGLRDNTIKIWD-RKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVET 291
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 135
+ L+ H L +RF ANG +++ +DR+ ++ ++ R+++ R V
Sbjct: 292 GECIKTLIH----HCEAVLHLRF-ANGI-MVTCSKDRSIAVWDMVSP---RDITIRRV 340
Score = 55 (24.4 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 33/150 (22%), Positives = 57/150 (38%)
Query: 257 GVAC-DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL 315
G+AC L++S I++WD E LV+ + +++ D
Sbjct: 387 GIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGK 446
Query: 316 VIRLFDVVALRMVRKFEG---------HTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
I+++D+ A R HT R+ F D ++SS D ++ IWD +
Sbjct: 447 -IKVWDLQAALDPRALSSEICLCSLVQHTGRV--FRLQFDDFQIVSSSHDDTILIWDFLD 503
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHV 396
A + + L PN +A A +
Sbjct: 504 APP-SGLPSSTNRATLPELPNQAAVARAQM 532
Score = 46 (21.3 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 438 GCQDENSSQPDVHRTDRV 455
G DE+SS+ D+ R D+V
Sbjct: 583 GDNDESSSEEDLDRVDQV 600
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 109 (43.4 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 34/120 (28%), Positives = 65/120 (54%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISLHFFANEPVL 61
G+V L + D + ++ SG+S + +W++E ++++I H A++ L F AN ++
Sbjct: 263 GSVLCLQY--DNRVII-SGSSDATVRVWDVETGECIKTLIH--HCEAVLHLRF-ANG-IM 315
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++ S D SI +W + D + R GH A + F + R+I+SA DR +++S+
Sbjct: 316 VTCSKDRSIAVWDM-VSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSM 372
Score = 98 (39.6 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 261 DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLF 320
D + ++SA IKVW + + + +R L+ + + D IRL+
Sbjct: 352 DFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR-GRLVVSGSSDNTIRLW 410
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSIT 380
D+ + +R EGH + + C D K ++S DG +++WD+ A A+ ++ +
Sbjct: 411 DIHSGVCLRVLEGHEELVR--CIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLC 468
Query: 381 AL 382
+L
Sbjct: 469 SL 470
Score = 86 (35.3 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 29/118 (24%), Positives = 59/118 (50%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
+ SG I IW+ K S I H +++ L + + V++S S+D ++++W +T
Sbjct: 235 IVSGLRDNTIKIWD-RKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVET 291
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 135
+ L+ H L +RF ANG +++ +DR+ ++ ++ R+++ R V
Sbjct: 292 GECIKTLIH----HCEAVLHLRF-ANGI-MVTCSKDRSIAVWDMVSP---RDITIRRV 340
Score = 55 (24.4 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 33/150 (22%), Positives = 57/150 (38%)
Query: 257 GVAC-DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL 315
G+AC L++S I++WD E LV+ + +++ D
Sbjct: 387 GIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGK 446
Query: 316 VIRLFDVVALRMVRKFEG---------HTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
I+++D+ A R HT R+ F D ++SS D ++ IWD +
Sbjct: 447 -IKVWDLQAALDPRALSSEICLCSLVQHTGRV--FRLQFDDFQIVSSSHDDTILIWDFLD 503
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHV 396
A + + L PN +A A +
Sbjct: 504 APP-SGLPSSTNRATLPELPNQAAVARAQM 532
Score = 46 (21.3 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 438 GCQDENSSQPDVHRTDRV 455
G DE+SS+ D+ R D+V
Sbjct: 583 GDNDESSSEEDLDRVDQV 600
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 141 (54.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 40/152 (26%), Positives = 70/152 (46%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
HN + V + + SA G I+ WD + + S + + +G +
Sbjct: 59 HNRSIDCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVV 118
Query: 310 TVADDLVIRLFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
+ ++D +RL+DV ++ GH + FS DG W+ S+G++GS+ IWD+ ++
Sbjct: 119 SGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSK 178
Query: 369 QIDAIHVDVSITALS---LSPNMDVLATAHVD 397
QI D +TA++ P +LA VD
Sbjct: 179 QIMEFIADPPVTAITCVQFHPFEFLLAAGRVD 210
Score = 70 (29.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 35 RRLQSVIRE--AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
R+L S I + AHD+ + SL VL++ D ++ +W G +GH+
Sbjct: 5 RKLISKIYDIKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAI----GQNECFMSLTGHN 60
Query: 93 APPLCIRFYANGRHILSA 110
C+RF + SA
Sbjct: 61 RSIDCVRFAYKDNFVYSA 78
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 165 (63.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 37/160 (23%), Positives = 78/160 (48%)
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVN 305
S Y H+ + V D++ L+ + G IK+WD + + +++ + V + +H
Sbjct: 54 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 113
Query: 306 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
A+ + D ++++D+ + ++GHT + F+ DG+W++S G D +++WD+
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 173
Query: 366 LARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + + I +L P+ +LAT D+ V W
Sbjct: 174 AGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKT-VKFW 212
Score = 128 (50.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RG V L F+ DG+ + SG V+ +W+L +L + +H+ I SL F +E +L
Sbjct: 144 RG-VNVLRFTPDGR-WIVSGGEDNVVKVWDLTAGKLLHEFK-SHEGKIQSLDFHPHEFLL 200
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+ SAD ++K W +T + L+ + C+ F +G+ +L G + ++FS
Sbjct: 201 ATGSADKTVKFWDLETFE----LIGSGGTETTGVRCLTFNPDGKSVL-CGLQESLKIFS 254
Score = 45 (20.9 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 458 DSFGLPTFKQQIPDLVTLSLLPKSQWQSL 486
DS L + + + PDL T SLL +SQ Q +
Sbjct: 507 DSRRLSSSRNE-PDLPTSSLLERSQSQPI 534
Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 528 ESTKEDTESLKVGNKTKPDIPVSQFIQ 554
+S D+ L ++ +PD+P S ++
Sbjct: 502 QSKAADSRRLS-SSRNEPDLPTSSLLE 527
>ZFIN|ZDB-GENE-040426-2370 [details] [associations]
symbol:aamp "angio-associated, migratory cell
protein" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2370
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:14 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX EMBL:BC067708 IPI:IPI00502410
RefSeq:NP_998103.1 UniGene:Dr.11399 ProteinModelPortal:Q6NW65
STRING:Q6NW65 PRIDE:Q6NW65 GeneID:405874 KEGG:dre:405874
NextBio:20817836 ArrayExpress:Q6NW65 Bgee:Q6NW65 Uniprot:Q6NW65
Length = 420
Score = 117 (46.2 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ +V + FSSD L ASG SGVI +W++EKR + E D + H A PVL
Sbjct: 125 KDSVVCVGFSSDSA-LAASGDMSGVIRVWSVEKRE-EVWSAEVGDLEWLEWHPCA--PVL 180
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++ AD S+ MW + G R F+S C R +G+ + +D + RL+ +
Sbjct: 181 LAGVADGSVWMWKLPS--GACRT--FQSP-GCQTTCGRILPDGKRAIVGYEDGSLRLWDL 235
Query: 122 IQ 123
Q
Sbjct: 236 KQ 237
Score = 87 (35.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 32/152 (21%), Positives = 69/152 (45%)
Query: 214 GNFAVLGTAGGWIERFNLQSGISRGSYLDM-SERSNYAHNGEVVGVACDSTNTLMISA-G 271
G + G+ G + + SG S+ SE S A + V + N L ++A
Sbjct: 263 GALLLSGSVDGQAKLISSSSGKVLCSFSSQTSEGSGSAQDSNSVE-SVGFCNVLPLAAVA 321
Query: 272 Y-HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRK 330
Y G + ++D L+ + + +V++ + + ++ T + V+ L+D + +V +
Sbjct: 322 YLDGTLAIYDLNTHTLRHQCKHEVGVVQLQWEAESAVVCTCSLSGVLSLWDARSGVLVSE 381
Query: 331 FEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
F GH+ I DF + + +++G D +++
Sbjct: 382 FHGHSAEILDFVLNREASVAVTAGGDHKAKVF 413
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 115 (45.5 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 26/108 (24%), Positives = 54/108 (50%)
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++++H L + + D I++ D+ + ++++ + H ++ G +L S+G D
Sbjct: 235 QVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDS 294
Query: 358 SLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
++IWD+ RQI ++ D IT + + + D AT QN +W
Sbjct: 295 KIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGG-SQNLCMVW 341
Score = 104 (41.7 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DV 377
L D V + + + H D ++ F DG L+SS D ++I D+ + I + D
Sbjct: 214 LDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDA 273
Query: 378 SITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVK 429
+ ++S+ P LA+A D + +W R G Y++ K+I +V+
Sbjct: 274 QVNSISIHPTGYFLASAGSDSK-IKIWDLR---QGRQIYTLYSNDKDITTVQ 321
Score = 99 (39.9 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+GAV + +S DG+ + + G I +W + S+I+ AH AI S+ F A+ L
Sbjct: 89 KGAVYCVKYSPDGETIASCGQDRQ-IRLWQNTVQSKCSIIK-AHCGAIRSMSFSADGGYL 146
Query: 62 MSASADNSIKMW 73
+S+S D ++K+W
Sbjct: 147 LSSSDDKTLKLW 158
Score = 87 (35.7 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
A +A+A Q L + SS + L R H++ I F + S
Sbjct: 7 ASSAVASQKQTQSKLGN-TSSKITEQQTTHDPALSRSFR-GHEDIITCADFDPKMRQVAS 64
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF-SVI 122
S D+ + +W F R +F GH C+++ +G I S GQDR RL+ + +
Sbjct: 65 CSKDSIVYVWNFKPQQ---RPFKF-VGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTV 120
Query: 123 QDQQS 127
Q + S
Sbjct: 121 QSKCS 125
Score = 83 (34.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 23/111 (20%), Positives = 53/111 (47%)
Query: 18 LASGASSGVISIWNL--EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIF 75
+AS + ++ +WN ++R + V H A+ + + + + S D I++W
Sbjct: 62 VASCSKDSIVYVWNFKPQQRPFKFV---GHKGAVYCVKYSPDGETIASCGQDRQIRLWQ- 117
Query: 76 DTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 126
+T +++ H + F A+G ++LS+ D+ +L+ +QD++
Sbjct: 118 NTVQSKCSIIK---AHCGAIRSMSFSADGGYLLSSSDDKTLKLWR-LQDKK 164
Score = 37 (18.1 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 470 PDLVTLSLLPKSQWQSLIN 488
P T+S++P Q Q N
Sbjct: 388 PSKKTISIIPPQQLQDTFN 406
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 130 (50.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 56/238 (23%), Positives = 105/238 (44%)
Query: 170 VVTCHMDTAQAYVWR----LQNFVLGEHILRPCPENPTAVKACTISACGN---FAVLGTA 222
+ T D +A +WR LQ+F E R + A+ A ++S N F V G+
Sbjct: 396 IATASKDN-EARLWRWNGELQDF---EPFAR-FQGHAGAITAISLSKSQNEPKFLVTGST 450
Query: 223 GGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF- 281
I+++ + + + S + SE + AH+ ++ + + +A Y KVW
Sbjct: 451 DLTIKKWKIPN--TPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTD 508
Query: 282 KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 341
G + L I +++ + L+ T + D I+++ ++ + EGHT+ +
Sbjct: 509 SGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 342 -CFSEDGKWLLSSGMDGSLRIWDVILARQIDAI-HVDVSITALSLSPNMDVLATAHVD 397
F+ + LLS G DG +++WD I ++ + D I A+ L + + TA D
Sbjct: 569 KFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADAD 626
Score = 103 (41.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+K V N LLA + +R+ D+ +R +EGHTD + S DGKW+ ++ D
Sbjct: 344 IKYVGPEFN-LLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKD 402
Query: 357 GSLRIW 362
R+W
Sbjct: 403 NEARLW 408
Score = 80 (33.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
LASG + G + IW+L KRR +++ H+ A+ + F + + +S DN +
Sbjct: 162 LASGDTMGTVKIWDLVKRRCIHTLKD-HNTAVRGVGFDQDGDLFISGGRDNVV 213
Score = 55 (24.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV--IREAHDNA-IISLHFFANEPV 60
AV + F DG L SG V+ I+N + + + I E + A +SL +
Sbjct: 191 AVRGVGFDQDGD-LFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSL--IDDRQY 247
Query: 61 LMSASADNSIKMWIFDTTDGD 81
+ ++N +K+W D G+
Sbjct: 248 FYTGGSENVLKIW--DIKSGE 266
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 99
V R A + II+ + + A A NS + I D P LR GH+ +
Sbjct: 331 VKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEK--PLELRVYEGHTDILNAVD 388
Query: 100 FYANGRHILSAGQDRAFRLF 119
+G+ I +A +D RL+
Sbjct: 389 VSTDGKWIATASKDNEARLW 408
Score = 43 (20.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS-LHFFANEPVL 61
G +A +S+G+ LLA+ + VI I NL+ + + + D +I+ L + L
Sbjct: 19 GGTSASISTSNGELLLATPLNEDVI-ITNLDTNEI--IYKIPGDGEVITNLTITPDGSYL 75
Query: 62 MSASADNSIKMWIFDTTDG 80
S ++ IFD G
Sbjct: 76 AMISQSQLLR--IFDLNKG 92
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 130 (50.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 56/238 (23%), Positives = 105/238 (44%)
Query: 170 VVTCHMDTAQAYVWR----LQNFVLGEHILRPCPENPTAVKACTISACGN---FAVLGTA 222
+ T D +A +WR LQ+F E R + A+ A ++S N F V G+
Sbjct: 396 IATASKDN-EARLWRWNGELQDF---EPFAR-FQGHAGAITAISLSKSQNEPKFLVTGST 450
Query: 223 GGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF- 281
I+++ + + + S + SE + AH+ ++ + + +A Y KVW
Sbjct: 451 DLTIKKWKIPN--TPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTD 508
Query: 282 KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 341
G + L I +++ + L+ T + D I+++ ++ + EGHT+ +
Sbjct: 509 SGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 342 -CFSEDGKWLLSSGMDGSLRIWDVILARQIDAI-HVDVSITALSLSPNMDVLATAHVD 397
F+ + LLS G DG +++WD I ++ + D I A+ L + + TA D
Sbjct: 569 KFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADAD 626
Score = 103 (41.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+K V N LLA + +R+ D+ +R +EGHTD + S DGKW+ ++ D
Sbjct: 344 IKYVGPEFN-LLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKD 402
Query: 357 GSLRIW 362
R+W
Sbjct: 403 NEARLW 408
Score = 80 (33.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
LASG + G + IW+L KRR +++ H+ A+ + F + + +S DN +
Sbjct: 162 LASGDTMGTVKIWDLVKRRCIHTLKD-HNTAVRGVGFDQDGDLFISGGRDNVV 213
Score = 55 (24.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV--IREAHDNA-IISLHFFANEPV 60
AV + F DG L SG V+ I+N + + + I E + A +SL +
Sbjct: 191 AVRGVGFDQDGD-LFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSL--IDDRQY 247
Query: 61 LMSASADNSIKMWIFDTTDGD 81
+ ++N +K+W D G+
Sbjct: 248 FYTGGSENVLKIW--DIKSGE 266
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 99
V R A + II+ + + A A NS + I D P LR GH+ +
Sbjct: 331 VKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEK--PLELRVYEGHTDILNAVD 388
Query: 100 FYANGRHILSAGQDRAFRLF 119
+G+ I +A +D RL+
Sbjct: 389 VSTDGKWIATASKDNEARLW 408
Score = 43 (20.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS-LHFFANEPVL 61
G +A +S+G+ LLA+ + VI I NL+ + + + D +I+ L + L
Sbjct: 19 GGTSASISTSNGELLLATPLNEDVI-ITNLDTNEI--IYKIPGDGEVITNLTITPDGSYL 75
Query: 62 MSASADNSIKMWIFDTTDG 80
S ++ IFD G
Sbjct: 76 AMISQSQLLR--IFDLNKG 92
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 118 (46.6 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +H +AT + D +RL+ + +++R F +T FS DGK L ++G +
Sbjct: 587 VAFHPNGNYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETK 646
Query: 359 LRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNI 416
+RI+D+ Q+ + H SI++LS S + LATA D + LW + + S S+
Sbjct: 647 VRIFDLAAGAQLAELKDH-SASISSLSWSTHNRHLATACSDGT-LRLWDIKKL-SPMSDN 703
Query: 417 DSYASGKEIVSVKMPSVSSVEGCQ 440
S S + ++ +V+S CQ
Sbjct: 704 SSAGSSSSATTNRVLTVNS--SCQ 725
Score = 91 (37.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 27/115 (23%), Positives = 54/115 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
VT + FS+ PL+ S + + W ++ R +H+ I L +++
Sbjct: 500 VTDVRFSAH-YPLMYSVSKDATMRCWRAHNLHCAAIYR-SHNYPIWCLDESPVGQYVVTG 557
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S D S ++W + + + L+ + +GH+ C+ F+ NG +I + D + RL+
Sbjct: 558 SKDLSARLW---SLEKEHALIIY-AGHTQDVECVAFHPNGNYIATGSADHSVRLW 608
Score = 67 (28.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 18/77 (23%), Positives = 38/77 (49%)
Query: 45 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 104
H + + F A+ P++ S S D +++ W +RS H+ P C+ G
Sbjct: 496 HTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHC---AAIYRS-HNYPIWCLDESPVG 551
Query: 105 RHILSAGQDRAFRLFSV 121
+++++ +D + RL+S+
Sbjct: 552 QYVVTGSKDLSARLWSL 568
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 118 (46.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 40/159 (25%), Positives = 72/159 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 310 TVADDLVIRLFDVVALR--MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
T +DD RLFD+ A + MV + IT FS+ G+ LL+ D + +WD + A
Sbjct: 243 TGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKA 302
Query: 368 RQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 303 DRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 111 (44.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D Q + +SG ++ ++W++E + Q+ H ++SL + + +
Sbjct: 144 GYLSCCRFLDDNQIVTSSGDTT--CALWDIETGQ-QTTTFAGHTGDVMSLSLAPDTRLFV 200
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D S K+W D +G R F +GH + I F+ NG + D RLF +
Sbjct: 201 SGACDASAKLW--DIREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 123 QDQQ 126
DQ+
Sbjct: 257 ADQE 260
Score = 81 (33.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ +
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETG 174
Query: 125 QQS 127
QQ+
Sbjct: 175 QQT 177
Score = 76 (31.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 57 (25.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 36 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 95
R + +R H I ++H+ + +L+SAS D + +W TT+ + RS S
Sbjct: 46 RTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN-KVHAIPLRS--SWVM 101
Query: 96 LCIRFYA-NGRHILSAGQDRAFRLFSV 121
C YA +G ++ G D ++S+
Sbjct: 102 TCA--YAPSGNYVACGGLDNICSIYSL 126
>DICTYBASE|DDB_G0288659 [details] [associations]
symbol:wdr18 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0288659 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GenomeReviews:CM000154_GR EMBL:AAFI02000119 KO:K14829 OMA:KLYIWEL
RefSeq:XP_636608.1 ProteinModelPortal:Q54IM3
EnsemblProtists:DDB0233986 GeneID:8626736 KEGG:ddi:DDB_G0288659
InParanoid:Q54IM3 ProtClustDB:CLSZ2728833 Uniprot:Q54IM3
Length = 560
Score = 104 (41.7 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 11 SSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
SSDG L G++SG++ +W + L + EAH N I + F ++ +++A D I
Sbjct: 121 SSDGN-YLVMGSASGMVYLWEVSTGTLLRMW-EAHYNKISCITFTKDDFYIITAGDDGII 178
Query: 71 KMWIFDTT-DGDPRLLRFR---SGHSA--PPLCIRFYANGRHILSAGQDRAFRLFSVI 122
W F+ D D LLR R S HS + F + S DR +++ ++
Sbjct: 179 NCWSFEQCLDRDVSLLRARNSFSDHSLGITSIVCSFGGCNSRLFSVSLDRTCKIWDLV 236
Score = 102 (41.0 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 329 RKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNM 388
+ F GHT IT S DG L+S +DG+ IWD + + +I + + SLS M
Sbjct: 324 KTFNGHTKAITSISLSMDGSLLISGSIDGNCNIWDTFSRQIVRSIANTIKGSISSLSVLM 383
Query: 389 DVLATAHVDQNG 400
+ + + + + NG
Sbjct: 384 NPIDSLNFNVNG 395
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 114 (45.2 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 245 ERSNYAHNGEVVGVACDSTN--TLMISAGYHGDIKVWDFKGRDL-----KSRWEVGCSLV 297
E+ H G V+ +CD ++ T S K+W F DL + R GC V
Sbjct: 1078 EKDFVCHQGTVL--SCDISHDATKFSSTSADKTAKIWSF---DLLLPLHELRGHNGC--V 1130
Query: 298 KIVYHRVNG-LLATVADDLVIRLFDVV---ALRMVRKF--EG---HTDRITDFCFSEDGK 348
+ V+ LLAT D+ IR+++V L + EG H +TD CFS DGK
Sbjct: 1131 RCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGK 1190
Query: 349 WLLSSGMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGV 401
L+S+G G ++ W+V+ + + ++ + +SP+ T VD G+
Sbjct: 1191 MLISAG--GYIKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVT--VDNLGI 1240
Score = 99 (39.9 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 30/116 (25%), Positives = 58/116 (50%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
LLA+G+S + +W+L ++ ++ + H N++ F ++ +L S SAD ++K+W D
Sbjct: 715 LLATGSSDCFLKLWDLNQKECRNTMF-GHTNSVNHCRFSPDDKLLASCSADGTLKLW--D 771
Query: 77 TTDGDPR----LLRFRSGHSAPP-------LCIRFYANGRHILSAGQDRAFRLFSV 121
T + R + +F P C + A+G I+ A +++ F LF +
Sbjct: 772 ATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIF-LFDI 826
Score = 98 (39.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPVLM 62
AV FS DGQ + + GA + ++ E +L + +AH++ ++ F ++ +
Sbjct: 617 AVYHACFSEDGQRIASCGADK-TLQVFKAETGEKLLEI--KAHEDEVLCCAFSTDDRFIA 673
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA-GQDRAF-RLFS 120
+ S D +K+W ++ G+ L+ HS C F + H+L A G F +L+
Sbjct: 674 TCSVDKKVKIW--NSMTGE--LVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWD 729
Query: 121 VIQDQ 125
+ Q +
Sbjct: 730 LNQKE 734
Score = 81 (33.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 30/152 (19%), Positives = 73/152 (48%)
Query: 256 VGVACDSTNTLMISAG-YHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVAD 313
V C S + I+ G +G I++ + R +SR++ ++ I + L + +D
Sbjct: 964 VSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSD 1023
Query: 314 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA-RQIDA 372
D I++++ + + GH + + DF ++ + LLS DG++++W++I ++ D
Sbjct: 1024 DAEIQVWNWQLDKCIF-LRGHQETVKDFRLLKNSR-LLSWSFDGTVKVWNIITGNKEKDF 1081
Query: 373 IHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ ++ + +S + ++ D+ +W
Sbjct: 1082 VCHQGTVLSCDISHDATKFSSTSADKTAK-IW 1112
Score = 76 (31.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 22/90 (24%), Positives = 39/90 (43%)
Query: 308 LATVA-DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
LA VA + L++ + V GH + FS DG L+S D ++R+W+
Sbjct: 854 LAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKK 913
Query: 367 ARQIDAIHVDVSITALSLSPNMDVLATAHV 396
+ A+ + + + + VLA H+
Sbjct: 914 VCKNSAVMLKQEVDVVFQENEVMVLAVDHI 943
Score = 67 (28.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/119 (21%), Positives = 51/119 (42%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M V ++S+DG ++ A+ I ++++ L I H + I F +
Sbjct: 797 MEVIVKCCSWSADGARIMV--AAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHL 854
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ A + +++W TD ++ R GH + + F +G L++ D+ RL+
Sbjct: 855 AVVALSQYCVELW---NTDSRSKVADCR-GHLSWVHGVMFSPDGSSFLTSSDDQTIRLW 909
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 153 (58.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 223 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
G W+ + I G+Y E++ H + VA S + L++S +KVW+
Sbjct: 84 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWEL 143
Query: 282 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 144 STGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 203
Query: 341 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 398
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 204 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 262
Query: 399 NGVYLW---VNRCM--FSGDSNID-------SYASGKEIVSVKMPSVSSVEGCQDENSSQ 446
N + LW +C+ ++G N S GK IVS ++ + Q + Q
Sbjct: 263 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQ 322
Query: 447 PDVHRTDRV 455
TD V
Sbjct: 323 KLQGHTDTV 331
Score = 125 (49.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD + LL SG+ + +W L + ++ H N + +F +++S
Sbjct: 117 ISDVAWSSDSR-LLVSGSDDKTLKVWELSTGKSLKTLK-GHSNYVFCCNFNPQSNLIVSG 174
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D S+++W D G + L+ HS P + F +G I+S+ D R++
Sbjct: 175 SFDESVRIW--DVRTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 230
Query: 125 Q 125
Q
Sbjct: 231 Q 231
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+A+ FS +G+ LAS ++ +I IW + + I H I + + ++ +L+S
Sbjct: 74 AVSAVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSRLLVS 131
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S D ++K+W T G + L+ GHS C F I+S D + R++ V
Sbjct: 132 GSDDKTLKVWELST--G--KSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 39/136 (28%), Positives = 75/136 (55%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFFANEPVLM 62
V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F N ++
Sbjct: 201 VSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYIL 257
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSAGQDRAFR 117
+A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S +D
Sbjct: 258 AATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSGSEDNMVY 311
Query: 118 LFSVIQDQQSRELSQR 133
++++ QS+E+ Q+
Sbjct: 312 IWNL----QSKEVVQK 323
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/69 (28%), Positives = 30/69 (43%)
Query: 215 NFAVLGTAGGWIERFNLQSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGY 272
NF+V G G WI + + + + L E + H V+ AC T ++ SA
Sbjct: 292 NFSVTG--GKWIVSGSEDNMVYIWN-LQSKEVVQKLQGHTDTVLCTACHPTENIIASAAL 348
Query: 273 HGD--IKVW 279
D IK+W
Sbjct: 349 ENDKTIKLW 357
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 131 (51.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 268 ISAGYHGDIKVWDFKGRDLKSRWEVG-CSLVKIV-YHRVNGLLATVADDLVIRLFDVVAL 325
+S Y ++W R VG S V V +H + +AT + D +RL+D +
Sbjct: 508 VSCSYDKTARLWATDSNQAL-RVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTG 566
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALS 383
+ VR GH ++ FS G++L S +D ++ IWD+ + + H ++T ++
Sbjct: 567 QSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTS-TVTTIT 625
Query: 384 LSPNMDVLATAHVDQNGVYLW 404
S + VLA A +D N + LW
Sbjct: 626 FSRDGTVLAAAGLDNN-LTLW 645
Score = 103 (41.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW--DV 364
LL + ++D IRL+ ++ V + GH + D F+ G + +S D + R+W D
Sbjct: 464 LLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDS 523
Query: 365 ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVN 406
A ++ H+ + + PN + +AT D+ V LW N
Sbjct: 524 NQALRVFVGHLS-DVDCVQFHPNSNYVATGSSDRT-VRLWDN 563
Score = 101 (40.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V AF+ + LL S + I +W+L R H + + F + +
Sbjct: 451 GPVYRCAFAPE-MNLLLSCSEDSTIRLWSLLTWSCVVTYR-GHVYPVWDVRFAPHGYYFV 508
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S S D + ++W TD + + LR GH + C++F+ N ++ + DR RL+ +
Sbjct: 509 SCSYDKTARLW---ATDSN-QALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 123 QDQQSR 128
Q R
Sbjct: 565 TGQSVR 570
Score = 94 (38.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 276 IKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGH 334
+++WD G+ ++ S+ + + LA+ + D I ++D+ +V H
Sbjct: 558 VRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRH 617
Query: 335 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVS 378
T +T FS DG L ++G+D +L +WD + D I H+ VS
Sbjct: 618 TSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTE-DYISNHITVS 662
Score = 75 (31.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/111 (27%), Positives = 50/111 (45%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
SD +LA G + IW+L +L++ +++A SL E SAD +++
Sbjct: 386 SDDSTMLACGFGDSSVRIWSLTPAKLRT-LKDAD-----SLRELDKE------SADINVR 433
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
M D G+ + R GH+ P F +LS +D RL+S++
Sbjct: 434 M--LDDRSGE--VTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLL 480
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 140 (54.3 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ +LA S + + LLA+G+ +W L + +L V H + ++ F + VL +A
Sbjct: 482 INSLAVSPNDK-LLATGSQDRTAKLWALPQCQLLGVFT-GHRRGLWNVQFSPTDQVLATA 539
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SAD +IK+W D L+ GH A L + F + G +LS+G D +L+++ +
Sbjct: 540 SADGTIKLWALQ----DFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSN 595
Query: 125 QQSREL 130
+ R L
Sbjct: 596 ECVRTL 601
Score = 133 (51.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 42/155 (27%), Positives = 68/155 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 307
H V +A D+T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L + A D IR++ + + H +T FSE G +LSSG D +WD+
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSY 227
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 402
+ + V S+ A L P A V +G++
Sbjct: 228 QTTRTVPVFESVEASVLLPEQPAPALG-VKSSGLH 261
Score = 119 (46.9 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 43/172 (25%), Positives = 72/172 (41%)
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC--S 295
G L ++ + H+ ++ +A + L+ + K+W L + G
Sbjct: 465 GPVLLQAQTTRRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVF-TGHRRG 523
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
L + + + +LAT + D I+L+ + ++ FEGH + F G LLSSG
Sbjct: 524 LWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGS 583
Query: 356 DGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
DG L++W + R +DA H D + L S D T D + LW
Sbjct: 584 DGLLKLWTIKSNECVRTLDA-HED-KVWGLHCSQLDDHAITGGSDSR-IILW 632
Score = 94 (38.1 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 36/132 (27%), Positives = 57/132 (43%)
Query: 3 GAVTALAFSSDGQPLLA-SGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G V +AF D LL S A I +W+L+ R +V+ AH +A+ SL F +
Sbjct: 152 GVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLT-AHYSAVTSLSFSEGGHTM 210
Query: 62 MSASADNSIKMW---IFDTTDGDPRLLRFRSG-----HSAPPLCIRFYANGRHILSAGQD 113
+S+ D +W + TT P + AP L ++ ++G H L+AG
Sbjct: 211 LSSGRDKICIVWDLQSYQTTRTVPVFESVEASVLLPEQPAPALGVK--SSGLHFLTAGDQ 268
Query: 114 RAFRLFSVIQDQ 125
R++ Q
Sbjct: 269 GILRVWEAASGQ 280
Score = 93 (37.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 31/131 (23%), Positives = 61/131 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 61
V ++AF + LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 112 VASMAFDATST-LLATGGCDGAVRVWDIVQHYGTHHFRGSP--GVVHLVAFHPDPTRLLL 168
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S++ D SI++W D L + H + + F G +LS+G+D+ +
Sbjct: 169 FSSAVDTSIRVWSLQ----DRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDK----ICI 220
Query: 122 IQDQQSRELSQ 132
+ D QS + ++
Sbjct: 221 VWDLQSYQTTR 231
Score = 91 (37.1 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 45/193 (23%), Positives = 92/193 (47%)
Query: 262 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEV-GC--SLVKIVYHRVNGLLATVADDLVI 317
S+ ++AG G ++VW+ G+ + ++ ++ G L R LL TV D +
Sbjct: 257 SSGLHFLTAGDQGILRVWEAASGQCVYTQPQMPGLRQELTHCTLARAADLLLTVTADHNL 316
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIH 374
L++ +L++ ++F G+++ + D F D +++S L+++++ LA QI H
Sbjct: 317 LLYEAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSP-CLKVFELQTLACQILHGH 375
Query: 375 VDVSITALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSV 428
D+ + AL + + A+ DQ+ + +W +N+ C+ G + S + I
Sbjct: 376 TDI-VLALDVFRKGWLFASCAKDQS-IRIWKMNKAGQVACVAQGSGHTHSVGT---ICCS 430
Query: 429 KMPSVSSVEGCQD 441
++ V G QD
Sbjct: 431 RLKESFLVTGSQD 443
Score = 65 (27.9 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 25/132 (18%), Positives = 58/132 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+T+ S D + +L + + + +++ W + + + + H + S+ F A +L +
Sbjct: 69 ITSFDLSPDDE-VLVTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAFDATSTLLATG 127
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 122
D ++++W G FR L + F+ + +L S+ D + R++S +
Sbjct: 128 GCDGAVRVWDIVQHYGTHH---FRGSPGVVHL-VAFHPDPTRLLLFSSAVDTSIRVWS-L 182
Query: 123 QDQQSRELSQRH 134
QD+ + H
Sbjct: 183 QDRSCLAVLTAH 194
Score = 62 (26.9 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
SD ++AS +S + ++ L+ Q I H + +++L F + S + D SI+
Sbjct: 346 SDSHIVVAS--NSPCLKVFELQTLACQ--ILHGHTDIVLALDVFRKGWLFASCAKDQSIR 401
Query: 72 MWIFDTTDGDPRLLRFRSGH--SAPPLCIRFYANGRHILSAGQDRAFRLF 119
+W + G + SGH S +C +++ QD +L+
Sbjct: 402 IWKMNKA-GQVACVAQGSGHTHSVGTICCSRLKES-FLVTGSQDCTVKLW 449
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 589 IIDHDDHQELDKRPEYLSIELLLDYLIHE 617
+ + + +E KR E + + LD L+HE
Sbjct: 635 VTEAEQAEEQAKREEQVIKQQELDNLLHE 663
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF--FANEP--- 59
V +A+S D + AS +G I IWN + + H I SL + +P
Sbjct: 150 VLCIAWSPDATKI-ASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCR 208
Query: 60 VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+L S D +I +W DT G ++R SGH+A C+R+ G I S QDR +++
Sbjct: 209 LLASCGKDGNIFIW--DTVQGT--VVRCLSGHTASVTCLRWGGEGL-IYSGSQDRTVKMW 263
Score = 92 (37.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 28/112 (25%), Positives = 56/112 (50%)
Query: 254 EVVGVACDSTNTLMI-SAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLLAT 310
++V S +T I SA + +K+W + G+ L S R VG + ++ + + LL +
Sbjct: 361 QLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVG-PVYQVAWSADSRLLVS 419
Query: 311 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ D +++F++ + GH D + +S +G ++S G D L++W
Sbjct: 420 GSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 68 (29.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 308 LATVADDLVIRLFDVVALRM-VRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
L + +DD + +++ + + + GH + FS D +++ S+ D S+++W
Sbjct: 332 LVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLW 387
Score = 56 (24.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 12/67 (17%), Positives = 33/67 (49%)
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++V+ +A+ + D ++L+ + + GH + +S D + L+S D
Sbjct: 365 QVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADS 424
Query: 358 SLRIWDV 364
+L+++++
Sbjct: 425 TLKVFEL 431
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 143 (55.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 44/155 (28%), Positives = 69/155 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 307
H V +A D+T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L + A D IR++ + + H +T FSEDG +LSSG D +WD+
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSY 227
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 402
+ V S+ A L P LA V +G++
Sbjct: 228 ETSRTVPVFESVEASVLLPEEPALALG-VKNSGLH 261
Score = 141 (54.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ +LA S + + LLA+G+ +W L + +L V H + ++ F + VL +A
Sbjct: 482 INSLAVSPNDK-LLATGSQDRTAKLWALPQCQLLGVF-SGHRRGLWNVQFSPTDQVLATA 539
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
SAD +IK+W D L+ GH A L + F + G +LS+G D +L+++ +
Sbjct: 540 SADGTIKLWALQ----DFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSN 595
Query: 125 QQSREL 130
+ R L
Sbjct: 596 ECVRTL 601
Score = 116 (45.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 43/174 (24%), Positives = 72/174 (41%)
Query: 236 SRGSYLDMSERSNY-AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC 294
S G + + +S H+ ++ +A + L+ + K+W L +
Sbjct: 462 SDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHR 521
Query: 295 -SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
L + + + +LAT + D I+L+ + ++ FEGH + F G LLSS
Sbjct: 522 RGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSS 581
Query: 354 GMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
G DG L++W + R +DA H D + L S D T D + LW
Sbjct: 582 GSDGLLKLWTIKSNECVRTLDA-HED-KVWGLHCSRLDDHAITGGSDSR-IILW 632
Score = 98 (39.6 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 43/186 (23%), Positives = 90/186 (48%)
Query: 268 ISAGYHGDIKVWDF-KGRDLKSRWEV-GC--SLVKIVYHRVNGLLATVADDLVIRLFDVV 323
++AG G ++VW+ G+ + ++ ++ G L R GLL TV D + L++
Sbjct: 263 LTAGDQGILRVWEAASGQCVYTQPQMSGLRQELTHCTLARAAGLLLTVTADHNLLLYEAR 322
Query: 324 ALRMVRKFEGHTDRITDFCF-SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSITA 381
+L++ ++F G+++ + D F + ++ + L+++++ LA QI H D+ + A
Sbjct: 323 SLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKVFELQTLACQILHGHTDI-VLA 381
Query: 382 LSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSVKMPSVSS 435
L + + A+ DQ+ + +W +N+ C+ G + S + I ++
Sbjct: 382 LDVFRKGWLFASCAKDQS-IRIWRMNKAGQVACVAQGSGHTHSVGT---ICCSRLKESFL 437
Query: 436 VEGCQD 441
V G QD
Sbjct: 438 VTGSQD 443
Score = 97 (39.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 3 GAVTALAFSSDGQPLLA-SGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G V +AF D LL S A I +W+L+ R +V+ AH +A+ SL F + +
Sbjct: 152 GVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLT-AHYSAVTSLSFSEDGHTM 210
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSA------PPLCIRFYANGRHILSAGQDRA 115
+S+ D +W + + + F S ++ P L + +G H L+AG
Sbjct: 211 LSSGRDKICIVWDLRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGI 270
Query: 116 FRLFSVIQDQ 125
R++ Q
Sbjct: 271 LRVWEAASGQ 280
Score = 96 (38.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 61
V ++AF + LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 112 VASMAFDATST-LLATGGCDGAVRVWDIVQHYGTHHFRGSP--GVVHLVAFHPDPTRLLL 168
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S++ D SI++W D L + H + + F +G +LS+G+D+ +
Sbjct: 169 FSSAVDTSIRVWSLQ----DRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDK----ICI 220
Query: 122 IQDQQSRELSQ 132
+ D +S E S+
Sbjct: 221 VWDLRSYETSR 231
Score = 68 (29.0 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 26/132 (19%), Positives = 58/132 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+TA S D + +L + + + +++ W + + + + H + S+ F A +L +
Sbjct: 69 ITAFDLSPDDE-VLVTASRALLLAQWAWREGTVARLWKAIHTAPVASMAFDATSTLLATG 127
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 122
D ++++W G FR L + F+ + +L S+ D + R++S +
Sbjct: 128 GCDGAVRVWDIVQHYGTHH---FRGSPGVVHL-VAFHPDPTRLLLFSSAVDTSIRVWS-L 182
Query: 123 QDQQSRELSQRH 134
QD+ + H
Sbjct: 183 QDRSCLAVLTAH 194
Score = 60 (26.2 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+D ++AS +S + ++ L+ Q I H + +++L F + S + D SI+
Sbjct: 346 NDSHIIVAS--NSPCLKVFELQTLACQ--ILHGHTDIVLALDVFRKGWLFASCAKDQSIR 401
Query: 72 MWIFDTTDGDPRLLRFRSGH--SAPPLCIRFYANGRHILSAGQDRAFRLF 119
+W + G + SGH S +C +++ QD +L+
Sbjct: 402 IWRMNKA-GQVACVAQGSGHTHSVGTICCSRLKES-FLVTGSQDCTVKLW 449
Score = 38 (18.4 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 589 IIDHDDHQELDKRPEYLSIELLLDYLIHE 617
+ + + +E KR E + + LD L+HE
Sbjct: 635 VTEAEQAEEQAKREEQVIKQQELDNLLHE 663
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 117 (46.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/159 (25%), Positives = 72/159 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 310 TVADDLVIRLFDVVALR--MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
T +DD RLFD+ A + MV + IT FS+ G+ LL+ D + +WD + A
Sbjct: 243 TGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 368 RQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 303 DRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 112 (44.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D Q + +SG ++ ++W++E + Q+ H ++SL + + +
Sbjct: 144 GYLSCCRFLDDNQIVTSSGDTT--CALWDIETGQ-QTTTFAGHTGDVMSLSLAPDTRLFV 200
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D S K+W D +G R F +GH + I F+ NG + D RLF +
Sbjct: 201 SGACDASAKLW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 123 QDQQ 126
DQ+
Sbjct: 257 ADQE 260
Score = 80 (33.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETG 174
Query: 125 QQS 127
QQ+
Sbjct: 175 QQT 177
Score = 76 (31.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 54 (24.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 36 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 95
R + +R H I ++H+ + +L+SAS D + +W TT+ + RS S
Sbjct: 46 RTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN-KVHAIPLRS--SWVM 101
Query: 96 LCIRFYA-NGRHILSAGQDRAFRLFSV 121
C YA +G ++ G D ++++
Sbjct: 102 TCA--YAPSGNYVACGGLDNICSIYNL 126
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 110 (43.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 27/134 (20%), Positives = 64/134 (47%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
++ + A+ ++ +G+ L+ + SG S+WN ++++ +AHD+A+ ++ + +
Sbjct: 92 VKHVIPAIQWTPEGRRLVVA-TYSGEFSLWNASSFTFETLM-QAHDSAVTTMKYSHDSDW 149
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++S AD IK+W + + H+ + F +N ++ D ++++
Sbjct: 150 MISGDADGMIKIW----QPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSDDNILKIWN 205
Query: 121 VIQDQQSRELSQRH 134
+Q R LS H
Sbjct: 206 FSNGKQERVLSGHH 219
Score = 91 (37.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 46/189 (24%), Positives = 85/189 (44%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHR 303
ER H+ +V L+ SA +K+WD + G + S + +++K +
Sbjct: 212 ERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRSGNCISSILKFKHTVLKTRFQP 271
Query: 304 VNG-LLATVADDLVIRLFDV-VALRMVRKFEGHTDRIT-DFCFSEDGKWLLSSGMDGSLR 360
G LL ++ D R+FD+ +++ + TD +T ++ + + L+ DGSL+
Sbjct: 272 TKGNLLMAISKDKSCRVFDIRYSMKELMCVRDETDYMTLEWHPINESMFTLAC-YDGSLK 330
Query: 361 IWDVI--LARQIDAIHV--DVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNI 416
+D++ L I I D IT+LS +P + ATA D+ + W ++
Sbjct: 331 HFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRT-IRFWTRARPIDPNAYD 389
Query: 417 DSYASGKEI 425
D + K+I
Sbjct: 390 DPTYNNKKI 398
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/185 (24%), Positives = 88/185 (47%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
LAT +D IR++D+ R+ R GH I FS+DGK L+S D ++ +WDV
Sbjct: 361 LATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAG 420
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVN-----RCMFSGDSNIDSYA-- 420
Q +H D +T + SP+ +A +D+ + +W + + + ++ S A
Sbjct: 421 EQKLILHTDDGVTTVMFSPDGQFIAAGSLDKV-IRIWTSSGTLVEQLHGHEESVYSVAFS 479
Query: 421 -SGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSF-GLPTFKQQIPDLVTLSLL 478
GK +VS + + + Q ++ P +++ + K +F G F ++++++
Sbjct: 480 PDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDF------ILSVTVS 533
Query: 479 PKSQW 483
P +W
Sbjct: 534 PDGKW 538
Score = 90 (36.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 39/171 (22%), Positives = 72/171 (42%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGD-IKVWDFKGRDLKSRWEVGCSLVKI 299
++ E+ H + V S + I+AG I++W G ++ S+ +
Sbjct: 417 VEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSV 476
Query: 300 VYHRVNGLLATVADDLVIRLFDV-----VALRMVRK-------FEGHTDRITDFCFSEDG 347
+ L + + D I+L+++ VA M ++ F GH D I S DG
Sbjct: 477 AFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDG 536
Query: 348 KWLLSSGMDGSLRIWDVILAR-QIDAIHVDVSITALSLSPNMDVLATAHVD 397
KW++S D +++ W Q+ + S+ ++++SPN AT D
Sbjct: 537 KWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGD 587
Score = 89 (36.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 31/122 (25%), Positives = 59/122 (48%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH-----DNAIISLHFFANEPVLMSA 64
FS+DG+ LA+G + + ++N+E +L ++++E D + S+ F + L +
Sbjct: 307 FSADGK-FLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATG 364
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
D I++W D R+ R +GH + F +G+ ++S DR L+ V
Sbjct: 365 VEDQQIRIW--DIAQ--KRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAG 420
Query: 125 QQ 126
+Q
Sbjct: 421 EQ 422
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 113 (44.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 36/114 (31%), Positives = 58/114 (50%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ +V+ LAFS DGQ LLASG GV+ I++ L+ V+ + I + + ++
Sbjct: 113 KDSVSCLAFSYDGQ-LLASGGLDGVVQIFDASSGTLKCVL-DGPGAGIEWVRWHPRGHIV 170
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRA 115
++ S D S+ MW D + L F SGH+ C F +G+ ++ G D A
Sbjct: 171 LAGSEDCSLWMW---NADKEAYLNMF-SGHNLNVTCGDFTPDGK-LICTGSDDA 219
Score = 86 (35.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 35/189 (18%), Positives = 79/189 (41%)
Query: 176 DTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGI 235
D A VW + HI++ P + + I++ + A+ G+ G + N+ +G
Sbjct: 217 DDASLIVWNPKTCE-SIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGK 275
Query: 236 SRGSYLDMSERSNYAHNGEVVGVACDS-TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC 294
+S +++ + E V + S T L + G + +WD + + E
Sbjct: 276 V------VSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEE 329
Query: 295 SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
+ + + + LAT + + ++D + V + GH D + S + +++S
Sbjct: 330 GVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVS 389
Query: 355 MDGSLRIWD 363
+D + R+++
Sbjct: 390 VDNTARVFE 398
Score = 80 (33.2 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 334 HTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV-SITALSLSPNMDVLA 392
H + +T + K+L + +G++ IWD +L + H ++ A+S+S N D +
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 393 TAHVD 397
+ VD
Sbjct: 387 SVSVD 391
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/155 (27%), Positives = 68/155 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 307
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 105 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPARLL 164
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 165 LFSSAADATIRMWSLQDQSCLAVMTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLQSH 224
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 402
+ + V S+ A L P +++ V G++
Sbjct: 225 QATRTVPVFESVEAAVLLPE-ELVPKLDVKSKGLH 258
Score = 106 (42.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 35/131 (26%), Positives = 62/131 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 61
V +AF LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 109 VATMAFDPTST-LLATGGCDGAVRVWDIVRHYGTHHFRGSP--GVVHLVTFHPDPARLLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S++AD +I+MW D L + H + + F A+G +LS+G+D+ V
Sbjct: 166 FSSAADATIRMWSLQ----DQSCLAVMTAHYSAVTSLTFSADGHTMLSSGRDK----ICV 217
Query: 122 IQDQQSRELSQ 132
I D QS + ++
Sbjct: 218 IWDLQSHQATR 228
Score = 101 (40.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/173 (23%), Positives = 73/173 (42%)
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SL 296
G L ++ + H+ ++ VA + L+ + K+W L + L
Sbjct: 462 GPILLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGL 521
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLS--SG 354
+ + ++ +LAT + D I+L+ + ++ FEGH + F G LLS SG
Sbjct: 522 WCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSG 581
Query: 355 MDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
DG +++W + + +DA H D + L S +D A + V LW
Sbjct: 582 SDGLVKLWTIKNNECVKTLDA-HED-KVWGLHCS-RLDDRALTGASDSCVILW 631
Score = 96 (38.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 3 GAVTALAFSSD-GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G V + F D + LL S A+ I +W+L+ + +V+ AH +A+ SL F A+ +
Sbjct: 149 GVVHLVTFHPDPARLLLFSSAADATIRMWSLQDQSCLAVMT-AHYSAVTSLTFSADGHTM 207
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSA--------PPLCIRFYANGRHILSAGQD 113
+S+ D +W + + F S +A P L ++ + G H L+AG
Sbjct: 208 LSSGRDKICVIWDLQSHQATRTVPVFESVEAAVLLPEELVPKLDVK--SKGLHFLTAGDQ 265
Query: 114 RAFRLFSVIQDQ 125
R++ Q
Sbjct: 266 GLLRVWEAASGQ 277
Score = 90 (36.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 43/187 (22%), Positives = 91/187 (48%)
Query: 268 ISAGYHGDIKVWDF-KGRDLKSRWEV-GC--SLVKIVYHRVNGLLATVADDLVIRLFDVV 323
++AG G ++VW+ G+ + ++ + G L + GLL +V D + L++
Sbjct: 260 LTAGDQGLLRVWEAASGQCVYAQPQPPGPRQGLTHCTLAQSAGLLLSVTTDHNLLLYEAR 319
Query: 324 ALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSIT 380
+L++ ++F G+++ + D F ED +++S SL+++++ + QI H D+ +
Sbjct: 320 SLQLQKQFAGYSEEVLDVRFLGPEDSHIVVASNSP-SLKVFELQTMTCQILHGHTDI-VL 377
Query: 381 ALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSVKMPSVS 434
AL + + A+ DQ+ + +W +N+ C+ G + S + I ++
Sbjct: 378 ALDVFRKGRLFASCAKDQS-ICIWRMNKAGRVACVAQGSGHTHSVGT---ICCSRLKETF 433
Query: 435 SVEGCQD 441
V G QD
Sbjct: 434 LVTGSQD 440
Score = 70 (29.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 26/132 (19%), Positives = 55/132 (41%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+TA S D Q +L + + +++ W + + + + H + ++ F +L +
Sbjct: 66 ITAFELSPDDQ-VLVTATRALLLAQWAWREGSITRLWKAIHTAPVATMAFDPTSTLLATG 124
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 122
D ++++W G FR L + F+ + +L S+ D R++S +
Sbjct: 125 GCDGAVRVWDIVRHYGTHH---FRGSPGVVHL-VTFHPDPARLLLFSSAADATIRMWS-L 179
Query: 123 QDQQSRELSQRH 134
QDQ + H
Sbjct: 180 QDQSCLAVMTAH 191
Score = 69 (29.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 28/118 (23%), Positives = 54/118 (45%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW---D 363
LLAT + D +L+ + +++ F GH + FS + L ++ DG++++W D
Sbjct: 490 LLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQD 549
Query: 364 VILARQIDAIHVDVSIT-ALSLSPNMDVLATAHVDQNGVYLWV---NRCMFSGDSNID 417
+ + H D S+ + +S +L+ V LW N C+ + D++ D
Sbjct: 550 FSCLKTFEG-H-DASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIKNNECVKTLDAHED 605
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00018
Identities = 41/161 (25%), Positives = 71/161 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H + VA + + + Y ++WD G +L + S+ I + + L A
Sbjct: 338 HLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAA 397
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ D + R++D+ R + F+GH + FS +G L S G D RIWD+ + +
Sbjct: 398 SCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 457
Query: 370 IDAI--HVDVSITALSLSPNMDV-LATAHVDQNGVYLWVNR 407
+ I H ++ ++ + P LATA D V +W R
Sbjct: 458 LYIIPAHANL-VSQVKYEPQEGYFLATASYDMK-VNIWSGR 496
Score = 122 (48.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 32/117 (27%), Positives = 60/117 (51%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+T +FS DG+ +LA+ + SGV +W + + + + H + F + L +A
Sbjct: 258 LTGCSFSRDGK-ILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATA 316
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAD + K+W TDG LL+ GH + F+ +G+++ + D+ +RL+ +
Sbjct: 317 SADRTAKLW---KTDGT--LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI 368
Score = 121 (47.7 bits), Expect = 0.00064, P = 0.00064
Identities = 38/156 (24%), Positives = 65/156 (41%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS-LVKIVYHRVNGLLA 309
H V + + +A K+W G L++ +E L ++ +H L
Sbjct: 297 HKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQT-FEGHLDRLARVAFHPSGKYLG 355
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
T + D RL+D+ + EGH+ + F +DG S G+D R+WD+ R
Sbjct: 356 TTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRS 415
Query: 370 IDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
I + + +++ SPN LA+ D N +W
Sbjct: 416 ILVFQGHIKPVFSVNFSPNGYHLASGGED-NQCRIW 450
Score = 96 (38.9 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 26/114 (22%), Positives = 53/114 (46%)
Query: 8 LAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASAD 67
+AF G+ L + + +W++ + +++E H ++ + F + + S D
Sbjct: 345 VAFHPSGK-YLGTTSYDKTWRLWDINTGA-ELLLQEGHSRSVYGIAFQQDGALAASCGLD 402
Query: 68 NSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ ++W D G +L F+ GH P + F NG H+ S G+D R++ +
Sbjct: 403 SLARVW--DLRTGRS-ILVFQ-GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Score = 80 (33.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 267 MISAGYHGDIKVWDFKGRDLKSRWEVGC--SLV-KIVYHRVNG-LLATVADDLVIRLFDV 322
+ S G ++WD + R KS + + +LV ++ Y G LAT + D+ + ++
Sbjct: 438 LASGGEDNQCRIWDLRMR--KSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSG 495
Query: 323 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+V+ GH ++ + D + + D ++++W
Sbjct: 496 RDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>WB|WBGene00010631 [details] [associations]
symbol:cash-1 species:6239 "Caenorhabditis elegans"
[GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0002009 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0040035 EMBL:Z71181 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 EMBL:Z71177 PIR:T18598
RefSeq:NP_505664.2 ProteinModelPortal:G5EE12 SMR:G5EE12
IntAct:G5EE12 EnsemblMetazoa:K07C5.8 GeneID:179445
KEGG:cel:CELE_K07C5.8 CTD:179445 WormBase:K07C5.8 OMA:IRFWDNT
NextBio:905428 Uniprot:G5EE12
Length = 678
Score = 104 (41.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
KIV H L +D IR FD ++ + H + ++ +G +LLS DG
Sbjct: 563 KIVSHPTMPLTLIGGEDRTIRYFDNTNGSIIHEAIAHVEGVSSLAIDPNGLYLLSGSHDG 622
Query: 358 SLRIWDV---ILARQIDAIHV--DVSITALSLSPNMDVLATAHVD 397
S+R+W++ ++I A D ++T+++ P+ ++ +A D
Sbjct: 623 SIRMWNMEKRSCLQEISAHRKKNDSAVTSVAFHPSRSLIGSAGAD 667
Score = 101 (40.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 30 WNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT----------TD 79
WN++ V +H ++I ++ F EPVL +AS D IK+W D T+
Sbjct: 349 WNIK------VTLRSHLDSIRAMQFHPVEPVLFTASEDGLIKLWNLDQKKDEKHNSGGTE 402
Query: 80 GDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+P + FR GH P LC+ G H+ + G D F+V
Sbjct: 403 LEP-VYTFR-GHKGPVLCLVLSPTGDHLYTGGIDGNICCFNV 442
Score = 71 (30.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR---LQS----VIREA---HDNAIIS 51
+G V L S G L G G I +N+ S V+ E H +AI S
Sbjct: 413 KGPVLCLVLSPTGDHLYTGGID-GNICCFNVPSSNGDPFDSYDPRVLTETLTGHTDAIWS 471
Query: 52 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAP-PLCIRFYANGR-HILS 109
+ + ++ L+SAS+D+++++W + +G+P + + S P + F + H+L+
Sbjct: 472 VAYHSSNSRLVSASSDSTVRLW--EPGNGEPLIRTIGAPKSGILPTSVDFVSTETSHLLA 529
Query: 110 A 110
A
Sbjct: 530 A 530
Score = 56 (24.8 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 15 QPLLASGASSGVISIWNLEKRR----------LQSVIR-EAHDNAIISLHFFANEPVLMS 63
+P+L + + G+I +WNL++++ L+ V H ++ L L +
Sbjct: 371 EPVLFTASEDGLIKLWNLDQKKDEKHNSGGTELEPVYTFRGHKGPVLCLVLSPTGDHLYT 430
Query: 64 ASADNSIKMWIFDTTDGDP 82
D +I + +++GDP
Sbjct: 431 GGIDGNICCFNVPSSNGDP 449
Score = 50 (22.7 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 81 DPRLL-RFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
DPR+L +GH+ + ++++ ++SA D RL+
Sbjct: 454 DPRVLTETLTGHTDAIWSVAYHSSNSRLVSASSDSTVRLW 493
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 106 (42.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 22/103 (21%), Positives = 58/103 (56%)
Query: 264 NTLMISA-GY-HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 321
N + ++A GY G + ++D + L+ + + +V++++ + ++ T + D +RL+D
Sbjct: 301 NVMPLAAVGYLDGTLAIYDLSTQSLRHKCQHESGIVQLLWEENSAVVYTCSLDGAVRLWD 360
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ +M+ ++ GH+ I DF ++D ++++ D +++ V
Sbjct: 361 ARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAKVFCV 403
Score = 93 (37.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 29/122 (23%), Positives = 59/122 (48%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ +VT FS D +A+G SG+I +W ++ + ++ E D + H A+ VL
Sbjct: 108 KDSVTCAGFSHDSV-FVATGDMSGLIKVWRVDTKE-EAWSFEVGDLEWMEWHPQAH--VL 163
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++ +AD + W++ GD + + G + P C + +G+ + +D R++ +
Sbjct: 164 LAGTADGN--SWMWKIPSGDCKTFQ---GPACPATCGKILPDGKRAVVGYEDGTMRIWDL 218
Query: 122 IQ 123
Q
Sbjct: 219 KQ 220
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 114 (45.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVL 61
G V A+ FS G LLA+G + +W + + + + NA I S+ F + L
Sbjct: 323 GEVNAVQFSP-GSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYL 381
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D + ++W D D RL +GHS L +F + I+S DR +L+ +
Sbjct: 382 LAASNDFASRIWTVD----DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Score = 89 (36.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/144 (25%), Positives = 66/144 (45%)
Query: 257 GVACDS---TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG----LLA 309
G +C+ T ++S + I+ WD + + +S +G L K R N LL+
Sbjct: 449 GSSCNDIVCTEQCVMSGHFDKKIRFWDIR-YNTRSLVSLGQLLGKQTASRFNPERTELLS 507
Query: 310 TVADDLVIRLFD--VVALRMVRKFEGHT--DRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
DDL +++ D + A+R G T FS DG ++ + +GSL +W V+
Sbjct: 508 CSRDDL-LKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVL 566
Query: 366 LAR--QIDAIHVDVSITALSLSPN 387
+ ++ + H I A++ SP+
Sbjct: 567 SGKVEKVLSKHHSSPINAVAWSPS 590
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFR-SGHSAPPLCIRF 100
+AHD + ++ F +L + D +K+W +F GD + SG +A I F
Sbjct: 319 DAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVF----GDKCEFKGSLSGSNAGITSIEF 374
Query: 101 YANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 137
+ G ++L+A D A R+++V D + R H K
Sbjct: 375 DSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGK 410
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/121 (32%), Positives = 68/121 (56%)
Query: 2 RGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F + +
Sbjct: 147 RGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL 204
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++AS D IK I+D + L SGH++ L + F + H +S+ D++ +++
Sbjct: 205 LVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 121 V 121
V
Sbjct: 261 V 261
Score = 125 (49.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 42/188 (22%), Positives = 76/188 (40%)
Query: 178 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
A +W L+N G+ I + P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQI-KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--K 139
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 296
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 357 GSLRIWDV 364
S+++WDV
Sbjct: 254 KSVKVWDV 261
Score = 116 (45.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 253 GEVVGV-ACDSTNTLMISAGYHGD--IKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 308
G +GV + D ++TL I+A D I++WD + G+ +KS + + + L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
AT + +F V + + + I +S DGK+L S +DG + I+D+ +
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 369 QIDAI--HVDVSITALSLSPNMDVLATAHVD 397
+ + H + I +L+ SP+ +L TA D
Sbjct: 182 LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 68 (29.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 4 AVTALAFSS---DGQPLLASGASSGVISIWNL--EKRRLQSVIREAHDNAIISLHFFANE 58
A+ ++A+ S + + +G+ ++ +W EK LQ + E H ++S+
Sbjct: 18 AIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSL-EGHQLGVVSVDISHTL 76
Query: 59 PVLMSASADNSIKMW 73
P+ S+S D I++W
Sbjct: 77 PIAASSSLDAHIRLW 91
Score = 50 (22.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 43 EAHDNAIISLHFFANEP----VLMSASADNSIKMW 73
+AHD+AI S+ + +N+ +++ S D+ +K+W
Sbjct: 13 QAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVW 47
>UNIPROTKB|F1ND84 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 OMA:VWSFEVG GO:GO:0014909
EMBL:AADN02016792 IPI:IPI00821947 Ensembl:ENSGALT00000038174
ArrayExpress:F1ND84 Uniprot:F1ND84
Length = 411
Score = 106 (42.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 22/103 (21%), Positives = 58/103 (56%)
Query: 264 NTLMISA-GY-HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 321
N + ++A GY G + ++D + L+ + + +V++++ + ++ T + D +RL+D
Sbjct: 304 NVMPLAAVGYLDGTLAIYDLSTQSLRHKCQHESGIVQLLWEENSAVVYTCSLDGAVRLWD 363
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ +M+ ++ GH+ I DF ++D ++++ D +++ V
Sbjct: 364 ARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAKVFCV 406
Score = 93 (37.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 29/122 (23%), Positives = 59/122 (48%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ +VT FS D +A+G SG+I +W ++ + ++ E D + H A+ VL
Sbjct: 111 KDSVTCAGFSHDSV-FVATGDMSGLIKVWRVDTKE-EAWSFEVGDLEWMEWHPQAH--VL 166
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++ +AD + W++ GD + + G + P C + +G+ + +D R++ +
Sbjct: 167 LAGTADGN--SWMWKIPSGDCKTFQ---GPACPATCGKILPDGKRAVVGYEDGTMRIWDL 221
Query: 122 IQ 123
Q
Sbjct: 222 KQ 223
>MGI|MGI:2158400 [details] [associations]
symbol:Wdr18 "WD repeat domain 18" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2158400 GO:GO:0007275
GO:GO:0005737 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00390000000289
CTD:57418 HOGENOM:HOG000046506 HOVERGEN:HBG059735 OMA:KQCIRTV
OrthoDB:EOG4PZJ6K InterPro:IPR026987 Pfam:PF14077 EMBL:AK133716
EMBL:AK160713 EMBL:AK168691 EMBL:BC095984 IPI:IPI00136252
RefSeq:NP_780659.2 UniGene:Mm.35828 ProteinModelPortal:Q4VBE8
SMR:Q4VBE8 STRING:Q4VBE8 PhosphoSite:Q4VBE8 PaxDb:Q4VBE8
PRIDE:Q4VBE8 Ensembl:ENSMUST00000045247 GeneID:216156
KEGG:mmu:216156 UCSC:uc007gat.1 InParanoid:Q4VBE8 NextBio:375024
Bgee:Q4VBE8 CleanEx:MM_WDR18 Genevestigator:Q4VBE8
GermOnline:ENSMUSG00000035754 Uniprot:Q4VBE8
Length = 431
Score = 113 (44.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 13 DGQPLLASGASSGVISIWNLEKR-RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
+G+ LLA+ I W L+++ +LQ I + L N +++ A+ SI
Sbjct: 48 NGEYLLAAQQGKNYICAWELQRKDQLQQKIM--CPGPVTCLTTAPNGLYVLAGIAE-SIY 104
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD---RAFRLFSVIQDQQSR 128
+W + G+ LL S H C++F +G H +SAG+D A+ L SV+Q SR
Sbjct: 105 LW--EVCTGN--LLVILSRHYQDVSCLKFTGDGSHFVSAGKDCLALAWSLCSVLQADPSR 160
Query: 129 ELSQRHV 135
L+ RHV
Sbjct: 161 ILAPRHV 167
Score = 86 (35.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 331 FEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSIT--ALSLSP 386
F+GH +++T S DG LLS D S+R+WDV + + + + +T A+ L+P
Sbjct: 265 FKGHRNQVTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCLRTVTLKGPVTNAAIILAP 322
Score = 52 (23.4 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 334 HTDRITDF-C-FSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVL 391
HT ITD C F + ++ +D ++++W + + ++ D+ IT+++ MD L
Sbjct: 171 HTLPITDLHCGFGGPMARVATASLDQTVKLWAISSGDLLLSVLFDMGITSVT----MD-L 225
Query: 392 ATAHV---DQNGVYLWVNRCMFSG 412
A H+ +G V+ C + G
Sbjct: 226 AEHHIFCGGSDGSIFQVDLCSWPG 249
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 138 (53.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 310
H G + + S+ ++ SA +KVWD + ++ + + +H L T
Sbjct: 128 HEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQHDDVVTMLKFHPTLLKLVT 187
Query: 311 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
V DL IR++D+V V H +I+ FS GK L+SSG D L +WD++
Sbjct: 188 VCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKELISSGRDKVLNVWDML 241
Score = 116 (45.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 46/171 (26%), Positives = 77/171 (45%)
Query: 281 FKGRDLKSRWEV-GCS--LVKIVY-HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTD 336
+ G+ L+ + E+ G + ++ I Y + N ++AT +++ I+ +D+ R + GH D
Sbjct: 369 YNGKTLERQGEIIGYNDEIIDIKYINDDNIIVATNSNE--IKTYDLNTKR-AQVLRGHED 425
Query: 337 RITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDV-SITALSLSPNMDVLAT 393
+ S DGK ++S D S IWD+ I + H V S AL P+ + A
Sbjct: 426 LVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAI 485
Query: 394 AHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENS 444
D + LW S DS K+I + SV+ + +D NS
Sbjct: 486 TASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISA----SVTKIAHEKDINS 532
Score = 91 (37.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/128 (20%), Positives = 60/128 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G + + S G ++AS +S + +W+LEK + HD+ + L F L+
Sbjct: 130 GPINEIDIHSSGN-IVASASSDKTVKVWDLEKGYCTHNFQ--HDDVVTMLKFHPTLLKLV 186
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ D +I+ ++D + +L + H + I F +G+ ++S+G+D+ ++ ++
Sbjct: 187 TVCLDLNIR--VYDLVTKECVIL---TNHLSQISGITFSNSGKELISSGRDKVLNVWDML 241
Query: 123 QDQQSREL 130
+ +
Sbjct: 242 SKNPKKTI 249
Score = 88 (36.0 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 26/114 (22%), Positives = 49/114 (42%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLL 308
AH V V + ++ G IK+W LK+ S++K + +
Sbjct: 567 AHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQI 626
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+VA + +I+L+++ + FEGH +I ++D + ++ G D L W
Sbjct: 627 VSVASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 83 (34.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 36/161 (22%), Positives = 72/161 (44%)
Query: 283 GRDLKSR-WEVGCSLVKIVYHR-VNGL--------LATVADDLVIRLFDVVALRMVRKFE 332
G D K + ++ S+ KI + + +N + AT + D ++L++V L + +
Sbjct: 507 GDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIK 566
Query: 333 GHTDRITDFCFSEDGKWLLSSGMDGSLRIW---DVILARQIDAIHVDVSITALSLSPNMD 389
H + FS + L+ DG+++IW D + ++ H + A +S M
Sbjct: 567 AHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEG-HKGSVLKASFISFGMQ 625
Query: 390 VLATAHVDQNGVYLW---VNRCM--FSG-DSNIDSYASGKE 424
+++ A + + LW N C+ F G +S I + + K+
Sbjct: 626 IVSVA--SEGLIKLWNIKTNECLNTFEGHESKIWALSVAKD 664
Score = 69 (29.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 16/69 (23%), Positives = 37/69 (53%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ A S + + +L G S+ I + +E + L + + H+ I + ++ ++ SA
Sbjct: 90 ISTFALSPNNEEILI-GCSNLQIKQYRIEDQSLVKIWK-GHEGPINEIDIHSSGNIVASA 147
Query: 65 SADNSIKMW 73
S+D ++K+W
Sbjct: 148 SSDKTVKVW 156
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLK 287
H ++ G+ ++ +IS+G + VWD ++ K
Sbjct: 210 HLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPK 246
Score = 46 (21.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 378 SITALSLSPNMDVLATAHVDQN 399
SI + + +MD + T+H+DQN
Sbjct: 839 SINPAASTLSMDRVETSHIDQN 860
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 138 (53.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/150 (27%), Positives = 65/150 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLK--SRWEVGCSLVKIVYHRVNGL 307
H+ EV V TN +SA G +D G L S +H +
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
L T V++++DV + V KF+GHT +T FSE+G +L ++ DG +R+WD+
Sbjct: 368 LGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKL 426
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVD 397
R + + ++ P+ L A D
Sbjct: 427 RNFKSF-LSADANSVEFDPSGSYLGIAASD 455
Score = 62 (26.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 28 SIWNLEK-RRLQS-VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLL 85
SI LE+ +L S + + + I S+ ++ V+ + D + + FD G ++L
Sbjct: 202 SIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVDATAVL--FDRPSG--QIL 257
Query: 86 RFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+GHS ++F + +L+A D+ R++
Sbjct: 258 STLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
>TAIR|locus:2063349 [details] [associations]
symbol:AT2G05720 "AT2G05720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 EMBL:AC007170 GO:GO:0030529 InterPro:IPR027106
PANTHER:PTHR19846 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000157615
IPI:IPI00531184 PIR:C84471 RefSeq:NP_178635.1 UniGene:At.52653
ProteinModelPortal:Q9SIB8 SMR:Q9SIB8 STRING:Q9SIB8
EnsemblPlants:AT2G05720.1 GeneID:815121 KEGG:ath:AT2G05720
TAIR:At2g05720 InParanoid:Q9SIB8 OMA:YIIPAHV PhylomeDB:Q9SIB8
ArrayExpress:Q9SIB8 Genevestigator:Q9SIB8 Uniprot:Q9SIB8
Length = 276
Score = 114 (45.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 38/129 (29%), Positives = 64/129 (49%)
Query: 314 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 373
D + R++D+ R + F+GH ++ FS +G L S G D RIWD+ + + + I
Sbjct: 151 DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII 210
Query: 374 --HVDVSITALSLSPNMDV-LATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKM 430
HV++ ++ + P LATA D N V +W R FS ++ + S ++ S+ +
Sbjct: 211 PAHVNL-VSQVKYEPQERYFLATASHDMN-VNIWSGRD-FSLVKSLVGHES--KVASLDI 265
Query: 431 PSVSSVEGC 439
SS C
Sbjct: 266 AVDSSSRKC 274
Score = 78 (32.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA-NEPVLMS 63
+T + S DG+ +L + + SGV +W + + + V+ + H + + F + ++ L +
Sbjct: 66 LTGCSLSRDGK-ILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLAT 124
Query: 64 ASADNSIKMWIFDTT 78
AS D + K+W D T
Sbjct: 125 ASTDRTEKIWKTDGT 139
Score = 43 (20.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 39
VT + FSS LA+ ++ IW + LQ+
Sbjct: 109 VTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQT 143
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 102 (41.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 17 LLASGASSGVISIWNLEKRR--------LQSVIREA-HD----NAIISLHFFANEPVLMS 63
LLASG+ IWNL + L+ IRE HD + SL + ++ +L +
Sbjct: 196 LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAT 255
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
S D ++W T DG+ L H P +++ G +ILSAG D+ ++I
Sbjct: 256 GSYDGFARIW---TEDGN--LASTLGQHKGPIFALKWNKKGNYILSAGVDKT----TIIW 306
Query: 124 DQQSRELSQR 133
D + E Q+
Sbjct: 307 DAHTGEAKQQ 316
Score = 99 (39.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG----RDLKSR----WEVG 293
D ++ H EV + D + L+ S +K+W K DL++ + +
Sbjct: 352 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIK 411
Query: 294 CSLVKIVYHRVNG--LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLL 351
S N +LA+ + D +RL+DV + H + + FS DGK+L
Sbjct: 412 WSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLA 471
Query: 352 SSGMDGSLRIWD 363
S D + IW+
Sbjct: 472 SGSFDKCVHIWN 483
Score = 76 (31.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 26/109 (23%), Positives = 52/109 (47%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK---------WLLSSGMDG 357
LLA+ +DD+ ++++ + V + H+ I +S G L S+ D
Sbjct: 376 LLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDS 435
Query: 358 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++R+WDV I + H + + +++ SP+ LA+ D+ V++W
Sbjct: 436 TVRLWDVERGVCIHTLTKHQE-PVYSVAFSPDGKYLASGSFDKC-VHIW 482
Score = 72 (30.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/104 (19%), Positives = 52/104 (50%)
Query: 262 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLF 320
++N ++ SA + +++WD +G + + + + + + LA+ + D + ++
Sbjct: 423 NSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + +V + G T I + C++ G + +S DGS+ + D+
Sbjct: 483 NTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 525
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 102 (41.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 17 LLASGASSGVISIWNLEKRR--------LQSVIREA-HD----NAIISLHFFANEPVLMS 63
LLASG+ IWNL + L+ IRE HD + SL + ++ +L +
Sbjct: 196 LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAT 255
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
S D ++W T DG+ L H P +++ G +ILSAG D+ ++I
Sbjct: 256 GSYDGFARIW---TEDGN--LASTLGQHKGPIFALKWNKKGNYILSAGVDKT----TIIW 306
Query: 124 DQQSRELSQR 133
D + E Q+
Sbjct: 307 DAHTGEAKQQ 316
Score = 99 (39.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG----RDLKSR----WEVG 293
D ++ H EV + D + L+ S +K+W K DL++ + +
Sbjct: 352 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIK 411
Query: 294 CSLVKIVYHRVNG--LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLL 351
S N +LA+ + D +RL+DV + H + + FS DGK+L
Sbjct: 412 WSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLA 471
Query: 352 SSGMDGSLRIWD 363
S D + IW+
Sbjct: 472 SGSFDKCVHIWN 483
Score = 76 (31.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 26/109 (23%), Positives = 52/109 (47%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK---------WLLSSGMDG 357
LLA+ +DD+ ++++ + V + H+ I +S G L S+ D
Sbjct: 376 LLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDS 435
Query: 358 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++R+WDV I + H + + +++ SP+ LA+ D+ V++W
Sbjct: 436 TVRLWDVERGVCIHTLTKHQE-PVYSVAFSPDGKYLASGSFDKC-VHIW 482
Score = 72 (30.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/104 (19%), Positives = 52/104 (50%)
Query: 262 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLF 320
++N ++ SA + +++WD +G + + + + + + LA+ + D + ++
Sbjct: 423 NSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + +V + G T I + C++ G + +S DGS+ + D+
Sbjct: 483 NTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 525
>UNIPROTKB|E2RH42 [details] [associations]
symbol:TEP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723
GO:GO:0030529 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00690000102183 OMA:SVPDAWK InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
EMBL:AAEX03009827 EMBL:AAEX03009828 EMBL:AAEX03009829
Ensembl:ENSCAFT00000008693 Uniprot:E2RH42
Length = 2602
Score = 125 (49.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 64/223 (28%), Positives = 95/223 (42%)
Query: 199 PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSY-LDMSERSN-----YAHN 252
P+ P + C+ AC + V G A W L S S GS L ER H
Sbjct: 2071 PQGPVVI--CSFLACHHDWVTGCA--WTRDNLLVSCSSDGSVGLWDPERQQRLGLFLGHQ 2126
Query: 253 GEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS-RWEVG-CSLVKIVYH-RVNG--- 306
V VA + + ++S G G +KVWD +G +L S G S + R G
Sbjct: 2127 SAVSAVA--AVDAHVVSVGRDGTLKVWDHRGVELTSIPAHSGPISQCAVALEPRAAGQPG 2184
Query: 307 ---LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
L+ATV D RL+ + + GH+ I+ SE LL++ DGS+R+W
Sbjct: 2185 SELLVATVGLDGATRLWHPLLVSQTHTLLGHSGPISAAAVSEASGLLLTASEDGSVRLWQ 2244
Query: 364 VIL-ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNG-VYLW 404
V A A ++ A++ +P+ V A+ + G + LW
Sbjct: 2245 VPEEADDTCAPRSPATVAAVAWAPDGSVAASG--SRTGELTLW 2285
Score = 90 (36.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 37/129 (28%), Positives = 56/129 (43%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV-IREAHDNAIISLHFFANEPVLM 62
AV AL + S G L SGA G + W LE R L+ + + + L + E +L
Sbjct: 1949 AVWALVWLSPGA--LVSGAEDGSLQGWVLEARSLRPLWLLPGRQGPVWGLAV-SGE-LLA 2004
Query: 63 SASADNSIKMW-----IFDTTDGD-PRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAF 116
S S +++W + + D PR R H P C F A+G + + G+DR
Sbjct: 2005 STSEALPVRLWPRQPLMLPLQEADFPRGAELRE-HQGPVSCCGFSADGGRLATGGRDRNL 2063
Query: 117 RLFSVIQDQ 125
+ V + Q
Sbjct: 2064 FCWDVRKPQ 2072
Score = 67 (28.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNL-EKRRLQSVIREAHDNAIISLHFFANEPVLM 62
+V ALAF + G+ ++A G G + +W+ E RL + AH +++ + L+
Sbjct: 1822 SVRALAFRAPGR-VVAVGRLDGTVELWSWREGVRLATF--PAHRGVVVAALPLQDGCQLV 1878
Query: 63 SASADNSIKMW 73
+A D +++W
Sbjct: 1879 TAGEDGEVQVW 1889
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 150 (57.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 47/210 (22%), Positives = 93/210 (44%)
Query: 200 ENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNG-EVVGV 258
+N ++K A N V G + G + + ++ + + NG + V +
Sbjct: 256 QNNASLKCAAFHAESNLLVAGFSNGIFGLYEMPD-------FNLIHTLSISQNGIDFVSI 308
Query: 259 ACDSTNTLMISAGYHGDIKVWDFKGRD--LKSRWEVGCSLVKIVYHRVNGLLATVADDLV 316
S L A G + VW+++ LK + S+ + Y + T ADD
Sbjct: 309 N-KSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFD-SMNALAYSPDGKRIVTAADDGK 366
Query: 317 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD 376
++++D+ + + F HT +T F++ G L ++ +DGS+R WD+I R
Sbjct: 367 LKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAP 426
Query: 377 --VSITALSLSPNMDVLATAHVDQNGVYLW 404
+S + +++ P+ +V+A +D V++W
Sbjct: 427 TRLSFSCMAVDPSGEVVAAGSLDSFDVHIW 456
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 31/129 (24%), Positives = 53/129 (41%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKR----------RLQSVIRE----AHDN 47
R AVTAL+FS G+ A G I +W + + +R AH +
Sbjct: 96 RTAVTALSFSPSGRHF-AVGIGRR-IEVWQVPQTPDSATGDDGLEFAPFVRHHSHAAHFD 153
Query: 48 AIISLHFFANEPVLMSASADNSIKMWIFDTTDG-DPRLLRFRSGHSAPPLCIRFYANGRH 106
+ + + + +SAS D + ++W + +G P +L SGH + F +
Sbjct: 154 EVRHIEWSRDSRFFLSASKDLTARIWSLNQEEGFTPTVL---SGHRQGVVGAWFSMDQET 210
Query: 107 ILSAGQDRA 115
I + +D A
Sbjct: 211 IYTVSKDGA 219
Score = 51 (23.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 27/134 (20%), Positives = 52/134 (38%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISLHFFANEPVLMS 63
V + +S D + L S + IW+L + + H ++ F ++ + +
Sbjct: 155 VRHIEWSRDSRFFL-SASKDLTARIWSLNQEEGFTPTVLSGHRQGVVGAWFSMDQETIYT 213
Query: 64 ASADNSIKMWIF--------DTTDG-DPRLLRFR--SGH-----SAPPLCIRFYANGRHI 107
S D ++ W + D DG D LR+R H +A C F+A +
Sbjct: 214 VSKDGAVFDWQYVGPQDKEDDDMDGADESDLRWRIVKRHYFMQNNASLKCAAFHAESNLL 273
Query: 108 LSAGQDRAFRLFSV 121
++ + F L+ +
Sbjct: 274 VAGFSNGIFGLYEM 287
Score = 41 (19.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 98 IRFYANGRHILSAGQDRAFRLFSVIQDQ 125
I + + R LSA +D R++S+ Q++
Sbjct: 158 IEWSRDSRFFLSASKDLTARIWSLNQEE 185
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 106 (42.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 39/130 (30%), Positives = 58/130 (44%)
Query: 17 LLASGASSGVISIWNLEKRR--------LQSVIREA-HD----NAIISLHFFANEPVLMS 63
LLASG+ IWNL + L+ IRE HD + SL + N +L +
Sbjct: 246 LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLAT 305
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
S D ++W T DG+ L H P +++ G +ILSAG D+ ++I
Sbjct: 306 GSYDGFARIW---TEDGN--LASTLGQHKGPIFALKWNRKGNYILSAGVDKT----TIIW 356
Query: 124 DQQSRELSQR 133
D + E Q+
Sbjct: 357 DAHTGEAKQQ 366
Score = 95 (38.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 31/132 (23%), Positives = 53/132 (40%)
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR----DLKSR----WEVG 293
D ++ H EV + D + L+ S +K+W K DL++ + +
Sbjct: 402 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIK 461
Query: 294 CSLVKIVYHRVNG--LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLL 351
S N +LA+ + D +RL+D+ H + + FS DGK+L
Sbjct: 462 WSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLA 521
Query: 352 SSGMDGSLRIWD 363
S D + IW+
Sbjct: 522 SGSFDKCVHIWN 533
Score = 71 (30.1 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 20/104 (19%), Positives = 51/104 (49%)
Query: 262 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLF 320
++N ++ SA + +++WD +G + + + + + LA+ + D + ++
Sbjct: 473 NSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 532
Query: 321 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + +V + G T I + C++ G + +S DGS+ + D+
Sbjct: 533 NTQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 575
Score = 68 (29.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/110 (20%), Positives = 51/110 (46%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK---------WLLSSGMDG 357
LLA+ +DD+ ++++ + + + H I +S G L S+ D
Sbjct: 426 LLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDS 485
Query: 358 SLRIWDV---ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++R+WD+ + + H + + +++ SP+ LA+ D+ V++W
Sbjct: 486 TVRLWDIERGVCTHTLTK-HQE-PVYSVAFSPDGKYLASGSFDKC-VHIW 532
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 122 (48.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 49/238 (20%), Positives = 99/238 (41%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
V T MDT A +W +QN GE + + + + + + G+ + G+ + +
Sbjct: 192 VATGSMDTT-AKLWDIQN---GEEVYT-LRGHSAEIISLSFNTSGDRIITGSFDHTVVVW 246
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKS 288
+ +G + + L H E+ + + +L+++ K+WD G+ + +
Sbjct: 247 DADTG-RKVNIL-------IGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVAT 298
Query: 289 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
++ + L+AT + D R+F + + K EGH I+ F+ G
Sbjct: 299 LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN 358
Query: 349 WLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
LL+ D + RIWD + + + H D I + + + +++ T D N +W
Sbjct: 359 HLLTGSSDKTARIWDAQTGQCLQVLEGHTD-EIFSCAFNYKGNIVITGSKD-NTCRIW 414
Score = 74 (31.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 25/120 (20%), Positives = 51/120 (42%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV---L 61
+T +A + G + +G+ +W+ + + E H N + ++ F N P +
Sbjct: 95 LTNVALNKSGSCFI-TGSYDRTCKLWDTASGEELNTL-EGHRNVVYAIAF--NNPYGDKI 150
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ S D + K+W +T FR GH+A +C+ F + + D +L+ +
Sbjct: 151 ATGSFDKTCKLWSVET---GKCYHTFR-GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 145 (56.1 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 47/197 (23%), Positives = 86/197 (43%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V IS+ G FA+ G+ G + ++L +G + ++ H +V+ VA + N
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--------GHTKDVLSVAFSADN 117
Query: 265 TLMISAGYHGDIKVWDFKG-------RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVI 317
++S IK+W+ G D + W V C V+ + N ++ + D ++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEW-VSC--VRFSPNSSNPIIVSCGWDKMV 174
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV 377
+++++ ++ GHT + S DG S G DG +WD+ + + +
Sbjct: 175 KVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 378 SITALSLSPNMDVLATA 394
+I AL SPN L A
Sbjct: 235 TINALCFSPNRYWLCAA 251
Score = 98 (39.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 261 DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIR 318
+S+N +++S G+ +KVW+ LK+ +G + L + L A+ D
Sbjct: 159 NSSNPIIVSCGWDKMVKVWNLANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAM 217
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 378
L+D+ + + +G D I CFS + WL ++ S++IWD+ +D + D+
Sbjct: 218 LWDLNEGKHLYTLDGG-DTINALCFSPNRYWLCAA-TGPSIKIWDLEGKIIVDELRQDII 275
Query: 379 ITALSLSP 386
T P
Sbjct: 276 TTNSKAEP 283
Score = 96 (38.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRL-----QSVIREAHDNAIISLHFFAN 57
G VT +A + ++ S + I +W L + Q +R H + + + ++
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR-GHSHFVSDVVISSD 74
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+S S D ++++W D T G RF GH+ L + F A+ R I+S +D+ +
Sbjct: 75 GQFALSGSWDGTLRLW--DLTTGTTTR-RF-VGHTKDVLSVAFSADNRQIVSGSRDKTIK 130
Query: 118 LFSVI 122
L++ +
Sbjct: 131 LWNTL 135
Score = 65 (27.9 bits), Expect = 0.00068, Sum P(2) = 0.00067
Identities = 30/117 (25%), Positives = 45/117 (38%)
Query: 170 VVTCHMDTAQAYVWRLQNFVLG-EHILRPCPENPTAVKACTISACGNFAVLGTAGGWIER 228
+V+C D VW L N L HI + + T+S G+ G G
Sbjct: 165 IVSCGWDK-MVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 229 FNLQSGISRGSY-LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR 284
++L G + Y LD G+ + C S N + A IK+WD +G+
Sbjct: 219 WDLNEG--KHLYTLD---------GGDTINALCFSPNRYWLCAATGPSIKIWDLEGK 264
Score = 64 (27.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 29/132 (21%), Positives = 52/132 (39%)
Query: 246 RSNY-AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHR 303
++N+ H G + V +L S G G +WD +G+ L + G + +
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL--DGGDTINALCFS 242
Query: 304 VNGLLATVADDLVIRLFD------VVALR---MVRKFEGHTDRITDFCFSEDGKWLLSSG 354
N A I+++D V LR + + + T +S DG+ L +
Sbjct: 243 PNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 355 MDGSLRIWDVIL 366
D +R+W V +
Sbjct: 303 TDNLIRVWQVTI 314
Score = 41 (19.5 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 107 ILSAGQDRAFRLFSVIQDQQSRELSQR 133
ILSA +D+ ++ + +D+ + + QR
Sbjct: 31 ILSASRDKTIIMWKLTRDETNYGIPQR 57
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 133 (51.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 39/121 (32%), Positives = 68/121 (56%)
Query: 2 RGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F + +
Sbjct: 147 RGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL 204
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++AS D IK I+D + L SGH++ L + F + H +S+ D++ +++
Sbjct: 205 LVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 121 V 121
V
Sbjct: 261 V 261
Score = 125 (49.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 42/188 (22%), Positives = 76/188 (40%)
Query: 178 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
A +W L+N G+ I + P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQI-KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--K 139
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 296
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 357 GSLRIWDV 364
S+++WDV
Sbjct: 254 KSVKVWDV 261
Score = 116 (45.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 253 GEVVGV-ACDSTNTLMISAGYHGD--IKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 308
G +GV + D ++TL I+A D I++WD + G+ +KS + + + L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
AT + +F V + + + I +S DGK+L S +DG + I+D+ +
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 369 QIDAI--HVDVSITALSLSPNMDVLATAHVD 397
+ + H + I +L+ SP+ +L TA D
Sbjct: 182 LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 65 (27.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 18 LASGASSGVISIWNLEKRRLQ-SVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
+ +G+ ++ +W RL E H ++S+ P+ S+S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Score = 49 (22.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 43 EAHDNAIISLHFFANEP----VLMSASADNSIKMW 73
+AHD+AI S+ + N+ +++ S D+ +K+W
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVW 47
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 106 (42.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 258 VACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHR-VNGLLATVADDLV 316
V DS + +IS Y I+ WD + + + + + N L+ +V DD
Sbjct: 452 VTTDSLGSTIISGHYDKKIRFWDIRTEKQADDVLMPAKITSLDLSKDCNYLICSVRDD-T 510
Query: 317 IRLFDVVALRMVRKFEGHTDRIT-DFC---FSEDGKWLLSSGMDGSLRIWDV--ILARQI 370
I+L D+ +++ F +I+ DF F+ G + DG++ IW+V L +
Sbjct: 511 IKLLDLRKNQVISTFTNEHFKISCDFARASFNSSGLKIACGSADGAIYIWNVNGFLEATL 570
Query: 371 DAIHVDVSITALSLSPNMDVLAT 393
H ++ A+S SPN ++LA+
Sbjct: 571 KG-H-STAVNAVSWSPNNNMLAS 591
Score = 95 (38.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
EAH+N ++ + E ++ + AD +K+W +PR + SG SA + F +
Sbjct: 315 EAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVL--SGSSAGINSVDFDS 372
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 137
G +IL D R+++V+ D + R H K
Sbjct: 373 TGAYILGTSNDYGARVWTVM-DNRLRHTLTGHSGK 406
Score = 76 (31.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/106 (17%), Positives = 46/106 (43%)
Query: 17 LLASGASSGVISIWNLEKRRLQS-VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIF 75
++A+G + + +W++ K + + I S+ F + ++ S D ++W
Sbjct: 332 MVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVW-- 389
Query: 76 DTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
T D RL +GHS + ++ +++ DR +++ +
Sbjct: 390 --TVMDNRLRHTLTGHSGKVMAAKYVQEPIKVVTGSHDRTLKIWDL 433
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 151 (58.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 40/160 (25%), Positives = 79/160 (49%)
Query: 206 KACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNT 265
++ S N+ V G+ G+IE +N +G R L + N V S ++
Sbjct: 218 ESAVFSPDANYLVSGSKDGFIEVWNYMNGKLRKD-LKYQAQDNLMMMDAAVRCISFSRDS 276
Query: 266 LMISAG-YHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFDV 322
M++ G G IKVW + D R++ + + + + + N + + +D V+R+ +
Sbjct: 277 EMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGM 336
Query: 323 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ + +++ GH+ ITD +S++G ++S DGS+R+W
Sbjct: 337 KSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVW 376
Score = 138 (53.6 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS D L SG+ G I +WN +L+ ++ +A DN A+ + F + +L
Sbjct: 222 FSPDAN-YLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ S D IK+W +T GD L RF H+ +RF + HILS G D R+ +
Sbjct: 281 TGSIDGKIKVWKVET--GDC-LRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMK 337
Query: 123 QDQQSREL 130
+ +E+
Sbjct: 338 SGKCLKEM 345
Score = 55 (24.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 33/166 (19%), Positives = 67/166 (40%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 310
H+ + V +IS G I+VW K + S + VG I+ V + +
Sbjct: 348 HSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGECLSTFRVGSEDYPIL--NVIPIPKS 405
Query: 311 VADDLVI-----RLFDV-VALRMVRKFEGHTDRITDF--CF-SEDGKWLLSSGMDGSLRI 361
+++ L+ V ++ ++VR DF C S G+W + DG +
Sbjct: 406 DPPQMIVCNRSNTLYVVNISGQVVRTMTSGKREKGDFINCILSPKGEWAYAIAEDGVMYC 465
Query: 362 WDVILARQIDAIHVDVSIT-ALSLSPNMDVLATAHVDQNGVYLWVN 406
+ V+ + V + L+ P+ +++A+ + + + LW +
Sbjct: 466 FMVLSGTLETTLPVTERLPIGLAHHPHQNLIAS-YAEDGLLKLWTD 510
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 113 (44.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D Q + +SG ++ ++W++E + Q+ H ++SL + + +
Sbjct: 44 GYLSCCRFLDDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFV 100
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D S K+W D +G R F +GH + I F+ NG + D RLF +
Sbjct: 101 SGACDASAKLW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR 156
Query: 123 QDQQSRELSQRHV 135
DQ+ S ++
Sbjct: 157 ADQELMTYSHDNI 169
Score = 112 (44.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 83 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 142
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 143 TGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 201
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
A + + H D ++ L ++ + +AT D + + +W
Sbjct: 202 ADRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 239
Score = 74 (31.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 171 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 230
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 231 SWDSFLKIWN 240
Score = 66 (28.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 67 DNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 126
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ + QQ
Sbjct: 18 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQ 76
Query: 127 S 127
+
Sbjct: 77 T 77
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 117 (46.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 41/159 (25%), Positives = 71/159 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+ + +A L IS K+WD + + + S + + NG +
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAIC 242
Query: 310 TVADDLVIRLFDVVALR--MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
T +DD RLFD+ A + +V E IT FS G+ LL+ D + IWD + A
Sbjct: 243 TGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKA 302
Query: 368 RQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++ + H D ++ L ++ + +AT D + + +W
Sbjct: 303 ERVGILSGH-DNRVSCLGVTADGMAVATGSWD-SFLKIW 339
Score = 107 (42.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D + +SG ++ ++W++E + ++V H +SL + + +
Sbjct: 144 GYLSCCRFLDDNSIVTSSGDTT--CALWDIETGQQKTVFL-GHTGDCMSLAVSPDFKLFI 200
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D + K+W D +G R F SGH + I F+ NG I + D RLF +
Sbjct: 201 SGACDATAKLW--DVREGTCRQT-F-SGHESDINAICFFPNGEAICTGSDDATCRLFDLR 256
Query: 123 QDQQ 126
DQ+
Sbjct: 257 ADQE 260
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + R LL DD ++D + V GH +R++ + DG + +
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTADGMAVATG 330
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 76 (31.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 25/122 (20%), Positives = 53/122 (43%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+ +S+D + LL S + G + +W+ I + +++ + + +
Sbjct: 58 IYAMHWSTDSK-LLVSASQDGKLIVWDTYTTNKVHAI-PLRSSWVMTCAYAPSGNFVACG 115
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
DN ++ T +G+ ++ R S H+ C RF + + S+G D L+ +
Sbjct: 116 GLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSG-DTTCALWDIETG 174
Query: 125 QQ 126
QQ
Sbjct: 175 QQ 176
Score = 60 (26.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/114 (26%), Positives = 52/114 (45%)
Query: 24 SGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT-TDGDP 82
SGV + ++ R +++ H I ++H+ + +L+SAS D + +W DT T
Sbjct: 35 SGVEVVGRIQMRTRRTL--RGHLAKIYAMHWSTDSKLLVSASQDGKLIVW--DTYTTNKV 90
Query: 83 RLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSVIQDQQ----SRELS 131
+ RS S C YA +G + G D ++++ + SRELS
Sbjct: 91 HAIPLRS--SWVMTCA--YAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELS 140
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/198 (24%), Positives = 91/198 (45%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V C IS+ G +A+ + W + L ++ G+ + R H +V+ V+ + N
Sbjct: 66 VSDCVISSDGAYAL---SASWDKTLRLWE-LATGT----TTRRFVGHTNDVLSVSFSADN 117
Query: 265 TLMISAGYHGDIKVWDFKGRDLK--------SRWEVGCSLVKIVYHRVNGLLATVADDLV 316
++S IK+W+ G D K S W V C V+ + N ++ + D +
Sbjct: 118 RQIVSGSRDRSIKLWNTLG-DCKYTITEKGHSEW-VSC--VRFSPNPQNPVIVSSGWDKL 173
Query: 317 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD 376
++++++ + ++ GHT I S DG S G DG+ +WD+ ++ + +++ +
Sbjct: 174 VKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAN 233
Query: 377 VSITALSLSPNMDVLATA 394
I AL SPN L A
Sbjct: 234 DEIHALVFSPNRYWLCAA 251
Score = 116 (45.9 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 35/119 (29%), Positives = 57/119 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V+ SSDG L S + + +W L H N ++S+ F A+ ++S
Sbjct: 66 VSDCVISSDGAYAL-SASWDKTLRLWELATGTTTRRF-VGHTNDVLSVSFSADNRQIVSG 123
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH--ILSAGQDRAFRLFSV 121
S D SIK+W T GD + GHS C+RF N ++ I+S+G D+ +++ +
Sbjct: 124 SRDRSIKLW---NTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWEL 179
Score = 113 (44.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQ----SVIREAHDNAIISLHFFANE 58
G VT+LA S + +L S + + IWNL + + H + + ++
Sbjct: 16 GWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISSDG 75
Query: 59 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 118
+SAS D ++++W T R + GH+ L + F A+ R I+S +DR+ +L
Sbjct: 76 AYALSASWDKTLRLWELATGTTTRRFV----GHTNDVLSVSFSADNRQIVSGSRDRSIKL 131
Query: 119 FSVIQD 124
++ + D
Sbjct: 132 WNTLGD 137
Score = 53 (23.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 29/132 (21%), Positives = 50/132 (37%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHR 303
+ + H G + V +L S G G +WD + + L S + +V+
Sbjct: 185 QTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSL-NANDEIHALVFSP 243
Query: 304 VN-GLLATVADDLVIRLFDVVALRMVRKFE------GHTDRITD---FCFSEDGKWLLSS 353
L A A ++I FD+ V + + G R + +S DG+ L +
Sbjct: 244 NRYWLCAATASSIII--FDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLFAG 301
Query: 354 GMDGSLRIWDVI 365
D +R W V+
Sbjct: 302 YTDNIIRAWGVM 313
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 104 (41.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 42/171 (24%), Positives = 70/171 (40%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-----SLVKIV 300
RS H+ V G+ + N L +S +K WD ++S+W V L+ +
Sbjct: 116 RSFKGHDNIVNGLDIINHN-LFVSCSDDNTLKFWD-----IRSKWAVHIIKHDFPLLSVC 169
Query: 301 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+ L T D I+ +D ++ F GH D IT ++D L S D S+
Sbjct: 170 SDKKGEFLFTSCVDNTIKKYDCKNYKLKDTFIGHKDYITGLDINKDETMLASISADESIC 229
Query: 361 IWDVI-------LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
WD+ L Q+++ ++ + LS N D L N +Y++
Sbjct: 230 FWDIQPFSCEEKLLFQLNSPKYNIDYNLIKLSFNNDNLLACGSGDNYLYIY 280
Score = 89 (36.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+G V ++ FSSDG+ +AS + I + N+ + H NA++ + ++ +
Sbjct: 37 KGEVYSINFSSDGK-YIASSSFDMTIMVHNVYNECETIGVLRGHKNAVLQAKWLQDDNYI 95
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGH 91
SASAD+ + +W D + + +L F+ GH
Sbjct: 96 CSASADHKLFLW--DV-ECESKLRSFK-GH 121
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/121 (32%), Positives = 68/121 (56%)
Query: 2 RGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F + +
Sbjct: 147 RGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL 204
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++AS D IK I+D + L SGH++ L + F + H +S+ D++ +++
Sbjct: 205 LVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 121 V 121
V
Sbjct: 261 V 261
Score = 125 (49.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 42/188 (22%), Positives = 76/188 (40%)
Query: 178 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
A +W L+N G+ I + P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQI-KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--K 139
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 296
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 357 GSLRIWDV 364
S+++WDV
Sbjct: 254 KSVKVWDV 261
Score = 116 (45.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 253 GEVVGV-ACDSTNTLMISAGYHGD--IKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 308
G +GV + D ++TL I+A D I++WD + G+ +KS + + + L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
AT + +F V + + + I +S DGK+L S +DG + I+D+ +
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 369 QIDAI--HVDVSITALSLSPNMDVLATAHVD 397
+ + H + I +L+ SP+ +L TA D
Sbjct: 182 LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 65 (27.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 18 LASGASSGVISIWNLEKRRLQ-SVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
+ +G+ ++ +W RL E H ++S+ P+ S+S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Score = 49 (22.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 43 EAHDNAIISLHFFANEP----VLMSASADNSIKMW 73
+AHD+AI S+ + N+ +++ S D+ +K+W
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVW 47
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 102 (41.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 17 LLASGASSGVISIWNLEKRR--------LQSVIREA-HD----NAIISLHFFANEPVLMS 63
LLASG+ IWNL + L+ IRE HD + SL + ++ +L +
Sbjct: 197 LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAT 256
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
S D ++W T DG+ L H P +++ G +ILSAG D+ ++I
Sbjct: 257 GSYDGFARIW---TEDGN--LASTLGQHKGPIFALKWNKKGNYILSAGVDKT----TIIW 307
Query: 124 DQQSRELSQR 133
D + E Q+
Sbjct: 308 DAHTGEAKQQ 317
Score = 97 (39.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG----RDLKSR----WEVG 293
D ++ H EV + D + L+ S +K+W K DL++ + +
Sbjct: 353 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIK 412
Query: 294 CSLVKIVYHRVNG--LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLL 351
S N +LA+ + D +RL+DV + H + + FS DGK+L
Sbjct: 413 WSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLA 472
Query: 352 SSGMDGSLRIWD 363
S D + IW+
Sbjct: 473 SGSFDKCVHIWN 484
Score = 74 (31.1 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 25/109 (22%), Positives = 52/109 (47%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK---------WLLSSGMDG 357
LLA+ +DD+ ++++ + V + H+ I +S G L S+ D
Sbjct: 377 LLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDS 436
Query: 358 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
++R+WDV + + H + + +++ SP+ LA+ D+ V++W
Sbjct: 437 TVRLWDVERGVCLHTLTKHQE-PVYSVAFSPDGKYLASGSFDKC-VHIW 483
Score = 71 (30.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 25/127 (19%), Positives = 57/127 (44%)
Query: 241 LDMSERSNYAHNGEVVGVACDSTNT--LMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLV 297
L + Y G A + N+ ++ SA + +++WD +G L + + +
Sbjct: 401 LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVY 460
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
+ + LA+ + D + +++ + +V + G T I + C++ G + +S DG
Sbjct: 461 SVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDG 519
Query: 358 SLRIWDV 364
S+ + D+
Sbjct: 520 SVCVLDL 526
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/121 (32%), Positives = 68/121 (56%)
Query: 2 RGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F + +
Sbjct: 147 RGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL 204
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L++AS D IK I+D + L SGH++ L + F + H +S+ D++ +++
Sbjct: 205 LVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 121 V 121
V
Sbjct: 261 V 261
Score = 123 (48.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 41/188 (21%), Positives = 76/188 (40%)
Query: 178 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
A +W L+N G+ ++ P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQ-MKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESG--K 139
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 296
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 297 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 356
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 357 GSLRIWDV 364
S+++WDV
Sbjct: 254 KSVKVWDV 261
Score = 116 (45.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 253 GEVVGV-ACDSTNTLMISAGYHGD--IKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 308
G +GV + D ++TL I+A D I++WD + G+ +KS + + + L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYL 121
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
AT + +F V + + + I +S DGK+L S +DG + I+D+ +
Sbjct: 122 ATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 369 QIDAI--HVDVSITALSLSPNMDVLATAHVD 397
+ + H + I +L+ SP+ +L TA D
Sbjct: 182 LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 67 (28.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 18 LASGASSGVISIWNLEKRRLQ-SVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
+ +G+ ++ +W RL+ E H ++S+ P+ S+S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Score = 49 (22.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 43 EAHDNAIISLHFFANEP----VLMSASADNSIKMW 73
+AHD+AI S+ + N+ +++ S D+ +K+W
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVW 47
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 138 (53.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 48/212 (22%), Positives = 93/212 (43%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ +S+ G FA+ G+ G + ++L +G++ ++ H+ +V+ VA N
Sbjct: 78 VQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFV--------GHDKDVLSVAFSVDN 129
Query: 265 TLMISAGYHGDIKVWDFKGRDLKSRWEVGCSL---------VKIVYHRVNGLLATVAD-- 313
++SA IK+W+ G + ++ +G L V V N T+
Sbjct: 130 RQIVSASRDRTIKLWNTLG---ECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGS 186
Query: 314 -DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDA 372
D ++++++ ++ EGH + S DG S G DG +WD+ +++ +
Sbjct: 187 WDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYS 246
Query: 373 IHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ I +L SPN L A Q+ + +W
Sbjct: 247 LDAGSIIHSLCFSPNRYWLCAA--TQDSIKIW 276
Score = 106 (42.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V + SSDGQ L SG+ G + +W+L + + HD ++S+ F + ++SA
Sbjct: 78 VQDVVLSSDGQFAL-SGSWDGELRLWDLSTG-VTTRRFVGHDKDVLSVAFSVDNRQIVSA 135
Query: 65 SADNSIKMW--IFD---TTDGDPRLLRFRSGHSAPPLCIRFYANGRH--ILSAGQDRAFR 117
S D +IK+W + + T GD L GH+ C+RF N I+S DR +
Sbjct: 136 SRDRTIKLWNTLGECKYTIGGD---LGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVK 192
Query: 118 LFSV 121
++++
Sbjct: 193 VWNL 196
Score = 71 (30.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 29/122 (23%), Positives = 53/122 (43%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H G V VA +L S G G +WD +G+ L S + G + + + L
Sbjct: 208 HGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSL-DAGSIIHSLCFSPNRYWLC 266
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITD---FC----FSEDGKWLLSSGMDGSLRIW 362
D I+++D+ + +V+ + + +C +S DG L + DG++RI+
Sbjct: 267 AATQDS-IKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRIY 325
Query: 363 DV 364
+
Sbjct: 326 KI 327
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 533 DTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSA 567
D ES + KP+IPVS+ Q+L+ C + N+SA
Sbjct: 277 DLESKHIVQDLKPEIPVSKN-QMLY-CTSL-NWSA 308
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/119 (31%), Positives = 66/119 (55%)
Query: 2 RGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F + +
Sbjct: 147 RGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL 204
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
L++AS D IK I+D + L SGH + L + F + H +S+ D++ +++
Sbjct: 205 LVTASDDGYIK--IYDVQHAN--LAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 309
H VV V T ++ S+ I++WD + G+ +KS + + + LA
Sbjct: 63 HQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLA 122
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
T + + +F V + + I +S DGK+L S +DG + I+D+ +
Sbjct: 123 TGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVD 397
+ + H + I +L+ SP+ +L TA D
Sbjct: 183 LHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 111 (44.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 38/181 (20%), Positives = 73/181 (40%)
Query: 184 RLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDM 243
RL + G+ I + P + S F G+ G + F +++G + Y +
Sbjct: 89 RLWDLETGKQI-KSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETG--KKEY-SL 144
Query: 244 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYH 302
R + ++ +A + S G I ++D G+ L + + + +
Sbjct: 145 DTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 303 RVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ LL T +DD I+++DV + GH + + F D +SS D S+++W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 363 D 363
D
Sbjct: 260 D 260
Score = 110 (43.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 262 STNTLMISAGYH-GDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRL 319
S ++ ++ G H G + ++ + G+ S G ++ I Y LA+ A D +I +
Sbjct: 115 SPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Query: 320 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
FD+ +++ EGH I FS D + L+++ DG ++I+DV
Sbjct: 175 FDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 80 (33.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 13 DGQPLLASGASSGVISIW--NLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 70
DG + SG+ ++ +W N EK LQ + E H ++S+ + S+S D I
Sbjct: 30 DGSETVISGSLDDLVKVWKWNDEKLDLQWTL-EGHQLGVVSVDISHTGSIAASSSLDAHI 88
Query: 71 KMWIFDT 77
++W +T
Sbjct: 89 RLWDLET 95
Score = 59 (25.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 22/92 (23%), Positives = 42/92 (45%)
Query: 43 EAHDNAIISLHFFANEP----VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI 98
+AHD+AI S+ + N+ ++S S D+ +K+W ++ D L GH + +
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLD--LQWTLEGHQLGVVSV 70
Query: 99 RFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
G S+ D RL+ + +Q + +
Sbjct: 71 DISHTGSIAASSSLDAHIRLWDLETGKQIKSI 102
>WB|WBGene00004265 [details] [associations]
symbol:qui-1 species:6239 "Caenorhabditis elegans"
[GO:0050913 "sensory perception of bitter taste" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 HSSP:P16649
GO:GO:0050913 GeneTree:ENSGT00700000104282 EMBL:AL021487 PIR:T26919
RefSeq:NP_502613.2 ProteinModelPortal:O62471 SMR:O62471
STRING:O62471 PaxDb:O62471 EnsemblMetazoa:Y45F10B.10 GeneID:178326
KEGG:cel:CELE_Y45F10B.10 UCSC:Y45F10B.10 CTD:178326
WormBase:Y45F10B.10a HOGENOM:HOG000016418 InParanoid:O62471
OMA:MARDSEQ NextBio:900668 Uniprot:O62471
Length = 1592
Score = 121 (47.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
VT +SD Q L+ + A S I LE + + H +++SL +N L++
Sbjct: 956 VTCAILTSDDQYLITASADSSAKMI-KLETGEVMRSFND-HTGSVVSLQLTSNNQFLITG 1013
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D ++MW D T+G + + G AP + +N ++ A +D ++FS +
Sbjct: 1014 SGDFVVQMW--DVTNG--KCISRMGGLMAPVSTLAITSNDAFVVVACEDETLKVFSTVGG 1069
Query: 125 QQSREL 130
Q+ EL
Sbjct: 1070 QELHEL 1075
Score = 89 (36.4 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 26/118 (22%), Positives = 55/118 (46%)
Query: 6 TALAFSSDGQPLLASGASS--GVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
T L S++ Q +L SG S GVI +++ +L + H A+ L + + +S
Sbjct: 870 TVLTLSANHQYILISGNQSDPGVIYAYHIASEQLIGTFK-GHTAAVTCLCSSNDSSLFVS 928
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S D ++ +W+F + L H+A C ++ +++++A D + ++ +
Sbjct: 929 TSFDKTVNVWVFSQSTPTMSLTH----HTAKVTCAILTSDDQYLITASADSSAKMIKL 982
Score = 88 (36.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 21/97 (21%), Positives = 49/97 (50%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+AT + D+ ++++ + + + GH + +T C S D + ++S D + +W+V
Sbjct: 1351 IATGSRDMSLKIWQIDKGFLTQVLVGHENVVTCCCISFDERLVVSGARDEKIIVWNVQSG 1410
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ ++ +IT+LS++ + V+ + D V W
Sbjct: 1411 DMVCTVNTTAAITSLSMTGDSTVVFSTTED-GWVETW 1446
Score = 80 (33.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 44/199 (22%), Positives = 87/199 (43%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN 305
R + H+ EV+ + + MIS G + +W+ G D V + ++
Sbjct: 1243 RELFMHSSEVLSIM-SLVHNKMISCDIQGKMVIWELFGDDDTPEM-VATGVKPPIFVPPT 1300
Query: 306 GLL----ATVAD-DLVIRLFDVVALRMVRKFEGHTDRITDFCFS-EDGKWLLSSGMDGSL 359
G + ++++ ++ I F + R H+D IT F S + G ++ + D SL
Sbjct: 1301 GRIMVGHCSLSNKEMKIWAFPEEGPPVTRAKLSHSDEITCFATSPKGGNFIATGSRDMSL 1360
Query: 360 RIWDVI--LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID 417
+IW + Q+ H +V +T +S + ++ + D+ + +W N + SGD +
Sbjct: 1361 KIWQIDKGFLTQVLVGHENV-VTCCCISFDERLVVSGARDEK-IIVW-N--VQSGDM-VC 1414
Query: 418 SYASGKEIVSVKMPSVSSV 436
+ + I S+ M S+V
Sbjct: 1415 TVNTTAAITSLSMTGDSTV 1433
>UNIPROTKB|I3L928 [details] [associations]
symbol:THOC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000445 "THO complex part of
transcription export complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K13175 GO:GO:0046784
GO:GO:0000445 CTD:79228 GeneTree:ENSGT00390000015278 OMA:MVCGGGP
EMBL:FP312929 RefSeq:NP_001230613.1 UniGene:Ssc.54512
Ensembl:ENSSSCT00000026356 GeneID:100626533 KEGG:ssc:100626533
Uniprot:I3L928
Length = 341
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 209 TISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSER--SNYAHNGEVVGVACDSTNTL 266
++S CG F G G I F+L + +S + + + + AH+G V + ST+
Sbjct: 31 SVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPIVTFQAHDGPVYSMV--STDRH 88
Query: 267 MISAGYHGDIKVW---DFKGRDLKSRWEVGCSL-VKIVYHRVNGLLATVAD--------D 314
++SAG G++K W + + K W + +N LL + D
Sbjct: 89 LLSAG-DGEVKAWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGD 147
Query: 315 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIH 374
+ D+ R GHTD I E +LS G DG++R+WD+ AR++ I
Sbjct: 148 CQLHTMDLETGAFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAREVQTIE 207
Query: 375 V 375
V
Sbjct: 208 V 208
>RGD|708553 [details] [associations]
symbol:Thoc6 "THO complex 6 homolog (Drosophila)" species:10116
"Rattus norvegicus" [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000347 "THO complex" evidence=ISO] [GO:0000445
"THO complex part of transcription export complex"
evidence=IEA;ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:708553 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 GO:GO:0003723 KO:K13175 GO:GO:0046784 GO:GO:0000445
CTD:79228 HOGENOM:HOG000008085 HOVERGEN:HBG079643 OrthoDB:EOG42V8GK
GeneTree:ENSGT00390000015278 OMA:MVCGGGP EMBL:BC079149
IPI:IPI00201096 RefSeq:NP_077360.2 UniGene:Rn.42184
ProteinModelPortal:Q6AY87 PRIDE:Q6AY87 Ensembl:ENSRNOT00000004672
GeneID:79227 KEGG:rno:79227 UCSC:RGD:708553 InParanoid:Q6AY87
NextBio:614660 Genevestigator:Q6AY87 GermOnline:ENSRNOG00000003497
Uniprot:Q6AY87
Length = 341
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 47/181 (25%), Positives = 80/181 (44%)
Query: 209 TISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSER--SNYAHNGEVVGVACDSTNTL 266
++S CG F G G I F+L + +S + + + + +AH+G V + ST+
Sbjct: 31 SVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPMVTFHAHDGPVYSMV--STDRH 88
Query: 267 MISAGYHGDIKVW---DFKGRDLKSRWEVGCSL-VKIVYHRVNGLLATVAD--------D 314
++SAG G++K W + + K W + +N LL + D
Sbjct: 89 LLSAG-DGEVKGWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGD 147
Query: 315 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIH 374
+ D+ R GHTD I E +LS G DG++R+WD+ +A+++ I
Sbjct: 148 CQLHTMDLETGTFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRIAKEVQTIE 207
Query: 375 V 375
V
Sbjct: 208 V 208
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 140 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 114 (45.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F ++ S + I +W+ E + ++ H +++ + F +L
Sbjct: 108 RSPVTRVIFHPVFS-VIVSASEDATIKVWDHETGDFERTLK-GHTDSVQDISFDHTGKLL 165
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SAD +IK+W F + +R GH + NG HI+SA +D+ +++ V
Sbjct: 166 ASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 103 (41.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDHTGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW + G ++ +GH +R +G I S+ D+ R++ V
Sbjct: 210 ASRDKTIKMW--EVATG--YCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQR-HVAK 137
+ EL + HV +
Sbjct: 266 KECKAELREHEHVVE 280
Score = 81 (33.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 267 MISAGYHGDIKVWDFK-GRDLKSRWEVGC-SLVK-IVYHRVNGLLATVADDLVIRLFDVV 323
++S IK+WD G L + VG + V+ ++ H + + ADD +R++D
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTL--VGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYK 368
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
R + H +T F + ++++ +D ++++W+
Sbjct: 369 NKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00090, Sum P(2) = 0.00089
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 347 GKWLLSSGMDGSLRIWDV 364
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>SGD|S000001744 [details] [associations]
symbol:CAF4 "WD40 repeat-containing protein associated with
the CCR4-NOT complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IPI] [GO:0030014 "CCR4-NOT complex" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IGI] [GO:0000266 "mitochondrial fission"
evidence=IMP;IPI] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000001744 GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006357 EMBL:BK006944
GO:GO:0016559 GO:GO:0030014 EMBL:Z28261 PIR:S38108
RefSeq:NP_012962.3 PDB:2PQR PDBsum:2PQR ProteinModelPortal:P36130
SMR:P36130 DIP:DIP-5945N IntAct:P36130 MINT:MINT-674079
STRING:P36130 PaxDb:P36130 PeptideAtlas:P36130 EnsemblFungi:YKR036C
GeneID:853908 KEGG:sce:YKR036C GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 EvolutionaryTrace:P36130
NextBio:975239 Genevestigator:P36130 GermOnline:YKR036C
GO:GO:0000266 InterPro:IPR021653 Pfam:PF11615 Uniprot:P36130
Length = 643
Score = 142 (55.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
N LAT D ++RL+D+ + VR EGHTD IT F D + L++ MD S+RIWD+
Sbjct: 499 NSALATGTKDGIVRLWDLRVGKPVRLLEGHTDGITSLKF--DSEKLVTGSMDNSVRIWDL 556
Query: 365 ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGV 401
+ +D I D+ +++L L T ++ GV
Sbjct: 557 RTSSILDVIAYDLPVSSLDFDGK---LITVGANEGGV 590
Score = 57 (25.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA-NEPVLM 62
++TAL F + L +S ++ +W+L +Q H + + N +L+
Sbjct: 321 SITALDFDTPWGTLCSSSYQDRIVKVWDLN-HGIQVGELPGHLATVNCMQIDKKNYNMLI 379
Query: 63 SASADNSIKMW 73
+ S D ++K+W
Sbjct: 380 TGSKDATLKLW 390
Score = 45 (20.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 225 WIERFNLQSGISRGSYLDM-----SERSNYAHNGEVVGVACD 261
+IE +NL++ + M SE S++ N E + CD
Sbjct: 230 FIEEYNLEADREQSLRKQMEEERSSEASSFTQNEEAISSLCD 271
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 101 (40.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 41/177 (23%), Positives = 70/177 (39%)
Query: 232 QSGISRGSYLDMSERSNY----AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDL 286
+ G++R DM RSN H G V V C + +I+ +++WD G+ +
Sbjct: 247 RDGVAR--VWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTM 304
Query: 287 KSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSED 346
+ + H A+ + I+ + ++ FEGH I +ED
Sbjct: 305 GVLTHHKKGIRSLATHPREFTFASASTGS-IKQWKCPGGEFMQNFEGHNAIINTLSVNED 363
Query: 347 GKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYL 403
L S G +GS+ WD + I D + SL ++ T+ D+ G+ L
Sbjct: 364 NV-LFSGGDNGSMSFWDWKTGYRYQTI--DTTAQPGSLEAEAGIM-TSTFDRTGLRL 416
Score = 96 (38.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +LA + + ASGA I IWNL L+ + H + + L P L
Sbjct: 144 GWVRSLAVEPNNE-WFASGAGDRTIKIWNLATGALRLTLT-GHISTVRGLAVSPRHPYLF 201
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S D +K W +T +++R GH + + + +++ G+D R++ +
Sbjct: 202 SCGEDKMVKCWDLETN----KVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDM 256
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 144 (55.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 38/163 (23%), Positives = 79/163 (48%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMSFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + + DG +S+ DG++++W++
Sbjct: 336 LKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNM 378
Score = 127 (49.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 57
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRD 275
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+L + + D IK+W + G L R+ HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRYERAHSKGVTCLSFSKDSTQILSASFDQTIR 332
Query: 118 L 118
+
Sbjct: 333 I 333
Score = 120 (47.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV ++FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMSFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I+ I G L FR GHS+ +G H +SA D ++++
Sbjct: 322 ILSASFDQTIR--IHGLKSGKC-LKEFR-GHSSFVNEATLTPDGHHAISASSDGTVKVWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
Score = 70 (29.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 38/150 (25%), Positives = 65/150 (43%)
Query: 268 ISAGYHGDIKVWDFKGRDLKSRWE-VGCSL-VKIVYHRVNGLLATVADDLVI--RLFDVV 323
ISA G +KVW+ K + S ++ +G S I + V LL + V+ R VV
Sbjct: 365 ISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVI-LLPKNPEHFVVCNRSNTVV 423
Query: 324 ALRM----VRKFEGHTDRITDF--C-FSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV- 375
+ M VR F DF C S G+W+ G D L + + + + V
Sbjct: 424 IMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVTGKLERTLTVH 483
Query: 376 DVSITALSLSPNMDVLATAHVDQNGVY-LW 404
+ + ++ P+ +++ T ++G+ LW
Sbjct: 484 EKDVIGIAHHPHQNLIGT--YSEDGLLKLW 511
Score = 45 (20.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
ER+ H +V+G+A L+ + G +K+W
Sbjct: 477 ERTLTVHEKDVIGIAHHPHQNLIGTYSEDGLLKLW 511
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 466 KQQIPDLVTLSLLPKSQWQSLINLDII 492
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCTLSPRGEWIYCVGEDYV 465
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 117 (46.2 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C+ V+ +H LAT ++D RL+++ + VR F GH I FS DG+ L ++
Sbjct: 766 CNTVR--FHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATA 823
Query: 354 GMDGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
G D S+ +WD+ +++ + + +L S + +LA+ D V LW
Sbjct: 824 GEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCT-VRLW 874
Score = 109 (43.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
LLAT +D + L+D+ + V+K +GHT + FS DG L S D ++R+WDV
Sbjct: 819 LLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDV 876
Score = 92 (37.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +FS D Q LL+ + +W++E V + H+ + + F
Sbjct: 680 GPVYGCSFSPDSQYLLSCSEDT-TARLWSMETMS-NLVCYKGHNFPVWDVSFSPFGFYFA 737
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+AS D + ++W T P LR +GH + +RF+ N ++ + D++ RL+ +
Sbjct: 738 TASHDRTARLWT--TNHISP--LRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEI 792
Score = 87 (35.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIRE--AHDNAIISLHFFANEPVLMSASADNSIKMWIF 75
L SG+SS S L+K++ +S + H + F + L+S S D + ++W
Sbjct: 652 LNSGSSS---SSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSM 708
Query: 76 DTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
+T L+ ++ GH+ P + F G + +A DR RL++
Sbjct: 709 ETMSN---LVCYK-GHNFPVWDVSFSPFGFYFATASHDRTARLWT 749
Score = 54 (24.1 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 11 SSDGQPLLASGASSGVISIWNLEKRRLQ 38
S D Q L+A G S + IWNL++ + Q
Sbjct: 567 SKDAQ-LVAGGFSDSSVKIWNLKEMKEQ 593
Score = 54 (24.1 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GHS P F + +++LS +D RL+S+
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSM 708
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 142 (55.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 33/157 (21%), Positives = 72/157 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H + + + L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 61 HTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA 120
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+DV + K++ HT + FS DGKWL S+ D ++++WD+ +
Sbjct: 121 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV 180
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ H + + P+++ L + + W
Sbjct: 181 MFEFTGHYG-PVNVVEFHPSIEYLLASGSSSMTIRFW 216
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/210 (22%), Positives = 93/210 (44%)
Query: 203 TAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDS 262
T +++ ISA V G+ G I ++L++ L R+ H + +
Sbjct: 63 TPIESLQISAKEELIVAGSQSGSIRVWDLEAA----KIL----RTLLGHKANICSLDFHP 114
Query: 263 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LATVADDLVIRLFD 321
+ + S DIK+WD + + +++ V+ + +G LA+ ADD ++L+D
Sbjct: 115 YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 174
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG-SLRIWDVILARQIDAIHVDVS-I 379
+ A +++ +F GH + F ++LL+SG ++R WD+ + I + + +
Sbjct: 175 LTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPV 234
Query: 380 TALSLSPNMDVLATAHVDQNGVYLWV-NRC 408
+ +P+ L D VY W RC
Sbjct: 235 RCILFNPDGCCLYGGFQDSLRVYGWEPERC 264
Score = 119 (46.9 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ +L S+ + L+ +G+ SG I +W+LE ++ + H I SL F + S
Sbjct: 65 IESLQISAK-EELIVAGSQSGSIRVWDLEAAKILRTLL-GHKANICSLDFHPYGSFVASG 122
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S D IK+W D + +++S H+ C+RF +G+ + SA D +L+ +
Sbjct: 123 SLDTDIKLW--DVRRKGC-IFKYKS-HTQAVRCLRFSPDGKWLASAADDHTVKLWDL 175
Score = 106 (42.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/117 (24%), Positives = 54/117 (46%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V++L LLA+G +++W++ + L+ + H I SL A E ++++
Sbjct: 23 VSSLVLGKSTGRLLATGGDDCRVNVWSVAQ--LRHDLLTGHTTPIESLQISAKEELIVAG 80
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SI++W + ++LR GH A + F+ G + S D +L+ V
Sbjct: 81 SQSGSIRVWDLEAA----KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 133
Score = 81 (33.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 42/183 (22%), Positives = 76/183 (41%)
Query: 267 MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YH-RVNGLLATVADDLVIRLFDVVA 324
+ SA +K+WD + + V +V +H + LLA+ + + IR +D+
Sbjct: 161 LASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 220
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITA-LS 383
+V E + F+ DG L G SLR++ R D + V+ A LS
Sbjct: 221 FHVVSCIEEEATPVRCILFNPDG-CCLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLS 279
Query: 384 LSPNMDV-LATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDE 442
+ N + ++ A + + ++R SG S E+++ P+ SS+ D
Sbjct: 280 VCHNQLIGVSFAQSTVSSFVVDLSRVTKSG-SVPHGLLRNNELLAQPTPTGSSLRRSYDR 338
Query: 443 NSS 445
S+
Sbjct: 339 PST 341
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 142 (55.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 33/157 (21%), Positives = 72/157 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 309
H + + + L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA 121
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 369
+ + D I+L+DV + K++ HT + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV 181
Query: 370 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ H + + P+++ L + + W
Sbjct: 182 MFEFTGHYG-PVNVVEFHPSIEYLLASGSSSMTIRFW 217
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/210 (22%), Positives = 93/210 (44%)
Query: 203 TAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDS 262
T +++ ISA V G+ G I ++L++ L R+ H + +
Sbjct: 64 TPIESLQISAKEELIVAGSQSGSIRVWDLEAA----KIL----RTLLGHKANICSLDFHP 115
Query: 263 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LATVADDLVIRLFD 321
+ + S DIK+WD + + +++ V+ + +G LA+ ADD ++L+D
Sbjct: 116 YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG-SLRIWDVILARQIDAIHVDVS-I 379
+ A +++ +F GH + F ++LL+SG ++R WD+ + I + + +
Sbjct: 176 LTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPV 235
Query: 380 TALSLSPNMDVLATAHVDQNGVYLWV-NRC 408
+ +P+ L D VY W RC
Sbjct: 236 RCILFNPDGCCLYGGFQDSLRVYGWEPERC 265
Score = 119 (46.9 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ +L S+ + L+ +G+ SG I +W+LE ++ + H I SL F + S
Sbjct: 66 IESLQISAK-EELIVAGSQSGSIRVWDLEAAKILRTLL-GHKANICSLDFHPYGSFVASG 123
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S D IK+W D + +++S H+ C+RF +G+ + SA D +L+ +
Sbjct: 124 SLDTDIKLW--DVRRKGC-IFKYKS-HTQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 106 (42.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/117 (24%), Positives = 52/117 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V++L LLA+G +++W++ K + H I SL A E ++++
Sbjct: 23 VSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT-GHTTPIESLQISAKEELIVAG 81
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SI++W + ++LR GH A + F+ G + S D +L+ V
Sbjct: 82 SQSGSIRVWDLEAA----KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 134
Score = 81 (33.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 42/183 (22%), Positives = 76/183 (41%)
Query: 267 MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YH-RVNGLLATVADDLVIRLFDVVA 324
+ SA +K+WD + + V +V +H + LLA+ + + IR +D+
Sbjct: 162 LASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 221
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITA-LS 383
+V E + F+ DG L G SLR++ R D + V+ A LS
Sbjct: 222 FHVVSCIEEEATPVRCILFNPDG-CCLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLS 280
Query: 384 LSPNMDV-LATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDE 442
+ N + ++ A + + ++R SG S E+++ P+ SS+ D
Sbjct: 281 VCHNQLIGVSFAQSTVSSFVVDLSRVTKSG-SVPHGLLRNNELLAQPTPTGSSLRRSYDR 339
Query: 443 NSS 445
S+
Sbjct: 340 PST 342
>TAIR|locus:2018319 [details] [associations]
symbol:MAC3A "AT1G04510" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0005730
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0042742 eggNOG:COG2319 GO:GO:0006397 GO:GO:0045087
GO:GO:0005681 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 EMBL:AY039940 EMBL:AY142564 EMBL:AK221436
IPI:IPI00529251 PIR:E86177 RefSeq:NP_563708.1 UniGene:At.21449
HSSP:P32523 ProteinModelPortal:Q94BR4 SMR:Q94BR4 IntAct:Q94BR4
STRING:Q94BR4 PaxDb:Q94BR4 PRIDE:Q94BR4 DNASU:839503
EnsemblPlants:AT1G04510.1 GeneID:839503 KEGG:ath:AT1G04510
GeneFarm:3007 TAIR:At1g04510 HOGENOM:HOG000177308 InParanoid:Q94BR4
OMA:FPDANSV PhylomeDB:Q94BR4 ProtClustDB:CLSN2687671
Genevestigator:Q94BR4 Uniprot:Q94BR4
Length = 523
Score = 125 (49.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG----RDLKSRWEVGCSLVKIVYHRVNG 306
H+ EV V +TN +SA +D + E + +H
Sbjct: 308 HSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGL 367
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+L T +++++DV + V KF GH IT FSE+G +L ++ +DG +R+WD+
Sbjct: 368 ILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG-VRLWDL 424
Score = 72 (30.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 28/114 (24%), Positives = 53/114 (46%)
Query: 28 SIWNLEK-RRLQS-VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLL 85
S+ LEK +L S + + + I S+ ++ V+ + D + + FD G ++L
Sbjct: 202 SVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGIDTTAVL--FDRPSG--QIL 257
Query: 86 RFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ--SRELSQRHVAK 137
+GHS I+F + +L+A D+ R++ +D SR + H A+
Sbjct: 258 STLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAE 311
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 113 (44.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D Q + +SG ++ ++W++E + Q+ H ++SL + + +
Sbjct: 144 GYLSCCRFLDDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D S K+W D +G R F +GH + I F+ NG + D RLF +
Sbjct: 201 SGACDASAKLW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 123 QDQQSRELSQRHV 135
DQ+ S ++
Sbjct: 257 ADQELMTYSHDNI 269
Score = 112 (44.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 243 TGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
A + + H D ++ L ++ + +AT D + + +W
Sbjct: 302 ADRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETG 174
Query: 125 QQS 127
QQ+
Sbjct: 175 QQT 177
Score = 74 (31.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 36 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 95
R + +R H I ++H+ + +L+SAS D + +W TT+ + RS S
Sbjct: 46 RTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN-KVHAIPLRS--SWVM 101
Query: 96 LCIRFYA-NGRHILSAGQDRAFRLFSV 121
C YA +G ++ G D ++++
Sbjct: 102 TCA--YAPSGNYVACGGLDNICSIYNL 126
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 113 (44.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D Q + +SG ++ ++W++E + Q+ H ++SL + + +
Sbjct: 144 GYLSCCRFLDDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D S K+W D +G R F +GH + I F+ NG + D RLF +
Sbjct: 201 SGACDASAKLW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 123 QDQQSRELSQRHV 135
DQ+ S ++
Sbjct: 257 ADQELMTYSHDNI 269
Score = 112 (44.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 243 TGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
A + + H D ++ L ++ + +AT D + + +W
Sbjct: 302 ADRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETG 174
Query: 125 QQS 127
QQ+
Sbjct: 175 QQT 177
Score = 74 (31.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 36 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 95
R + +R H I ++H+ + +L+SAS D + +W TT+ + RS S
Sbjct: 46 RTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN-KVHAIPLRS--SWVM 101
Query: 96 LCIRFYA-NGRHILSAGQDRAFRLFSV 121
C YA +G ++ G D ++++
Sbjct: 102 TCA--YAPSGNYVACGGLDNICSIYNL 126
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 113 (44.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D Q + +SG ++ ++W++E + Q+ H ++SL + + +
Sbjct: 144 GYLSCCRFLDDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D S K+W D +G R F +GH + I F+ NG + D RLF +
Sbjct: 201 SGACDASAKLW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 123 QDQQSRELSQRHV 135
DQ+ S ++
Sbjct: 257 ADQELMTYSHDNI 269
Score = 112 (44.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 243 TGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
A + + H D ++ L ++ + +AT D + + +W
Sbjct: 302 ADRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETG 174
Query: 125 QQS 127
QQ+
Sbjct: 175 QQT 177
Score = 74 (31.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 36 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 95
R + +R H I ++H+ + +L+SAS D + +W TT+ + RS S
Sbjct: 46 RTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN-KVHAIPLRS--SWVM 101
Query: 96 LCIRFYA-NGRHILSAGQDRAFRLFSV 121
C YA +G ++ G D ++++
Sbjct: 102 TCA--YAPSGNYVACGGLDNICSIYNL 126
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 113 (44.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D Q + +SG ++ ++W++E + Q+ H ++SL + + +
Sbjct: 144 GYLSCCRFLDDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D S K+W D +G R F +GH + I F+ NG + D RLF +
Sbjct: 201 SGACDASAKLW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 123 QDQQSRELSQRHV 135
DQ+ S ++
Sbjct: 257 ADQELMTYSHDNI 269
Score = 112 (44.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 243 TGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
A + + H D ++ L ++ + +AT D + + +W
Sbjct: 302 ADRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETG 174
Query: 125 QQS 127
QQ+
Sbjct: 175 QQT 177
Score = 74 (31.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 36 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 95
R + +R H I ++H+ + +L+SAS D + +W TT+ + RS S
Sbjct: 46 RTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN-KVHAIPLRS--SWVM 101
Query: 96 LCIRFYA-NGRHILSAGQDRAFRLFSV 121
C YA +G ++ G D ++++
Sbjct: 102 TCA--YAPSGNYVACGGLDNICSIYNL 126
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 113 (44.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G ++ F D Q + +SG ++ ++W++E + Q+ H ++SL + + +
Sbjct: 144 GYLSCCRFLDDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S + D S K+W D +G R F +GH + I F+ NG + D RLF +
Sbjct: 201 SGACDASAKLW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 123 QDQQSRELSQRHV 135
DQ+ S ++
Sbjct: 257 ADQELMTYSHDNI 269
Score = 112 (44.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 309
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 310 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 243 TGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301
Query: 367 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
A + + H D ++ L ++ + +AT D + + +W
Sbjct: 302 ADRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETG 174
Query: 125 QQS 127
QQ+
Sbjct: 175 QQT 177
Score = 74 (31.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 294 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 353
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 354 GMDGSLRIWD 363
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 36 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 95
R + +R H I ++H+ + +L+SAS D + +W TT+ + RS S
Sbjct: 46 RTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN-KVHAIPLRS--SWVM 101
Query: 96 LCIRFYA-NGRHILSAGQDRAFRLFSV 121
C YA +G ++ G D ++++
Sbjct: 102 TCA--YAPSGNYVACGGLDNICSIYNL 126
WARNING: HSPs involving 502 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 685 662 0.00097 120 3 11 22 0.50 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 752
No. of states in DFA: 625 (66 KB)
Total size of DFA: 383 KB (2187 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.47u 0.16s 61.63t Elapsed: 00:00:02
Total cpu time: 61.58u 0.16s 61.74t Elapsed: 00:00:03
Start: Tue May 21 17:31:18 2013 End: Tue May 21 17:31:21 2013
WARNINGS ISSUED: 2