BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005656
(685 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14053|YC47_SCHPO Uncharacterized WD repeat-containing protein C1672.07
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1672.07 PE=4 SV=1
Length = 902
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/673 (36%), Positives = 370/673 (54%), Gaps = 45/673 (6%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + +F +DG P+LAS G +S W+L KRR+Q+V AH ++ + F +P+L+
Sbjct: 246 GQVLSCSFRTDGTPILASSNPIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLNGQPILV 305
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL-SAGQDRAFRLFSV 121
+A DNS+K WIFD+ DG PR+LR R+GH PP ++FY H L SA DR+ R S+
Sbjct: 306 TAGPDNSLKEWIFDSMDGAPRILRSRNGHYEPPSFVKFYGKSVHFLISAATDRSLRAVSL 365
Query: 122 IQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAY 181
QD QS ELSQ V +A+KL ++ EELKL + A + RE+ W NV+T H + + A
Sbjct: 366 YQDSQSTELSQGSVISKAKKLNVRPEELKLPEITALSSSNTREKYWDNVLTAHKNDSSAR 425
Query: 182 VWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL 241
W ++ LG+H+L P + T+V++ +S CGNF ++G++ G ++ +N+QSGI R S+
Sbjct: 426 TWNWKSKTLGQHVL-PTSDG-TSVRSVCVSCCGNFGLIGSSKGVVDVYNMQSGIKRKSFG 483
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVY 301
S V V D+ N ++++A G +K WDF +L +VG S+ +Y
Sbjct: 484 QSS-----LSGKPVTAVMLDNVNRILVTASLDGILKFWDFNKGNLIDSLDVGSSITHAIY 538
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
+ L+A DD IR+ DV ++VR+ GH++R+T F FS+ G+WL+++ +DG++R
Sbjct: 539 QHSSDLVAVACDDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRT 598
Query: 362 WDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYAS 421
WD+ ID+I T+L+ +P D LAT HVDQ G+ LW N MF S
Sbjct: 599 WDLPTGHLIDSISTPSVCTSLTFAPTGDYLATTHVDQVGISLWTNLSMFKHVST--KALR 656
Query: 422 GKEIVSVKMPSVSS------VEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTL 475
++V V PSVS VE + S+ D ++ T Q P+L TL
Sbjct: 657 LDDVVEVSAPSVSGEKGISVVEAALNVESNAED--------EEDISYRTMDQLDPNLQTL 708
Query: 476 SLLPKSQWQSLINLDIIKARNKPIEPPKKPEKAPFFLPSVPSLSGEILFKPSESTKEDTE 535
S LP++QWQ+LINL+ IKARN P E PK PEKAPFFLPS+ S + K +T+
Sbjct: 709 SKLPRTQWQTLINLEAIKARNAPKEVPKVPEKAPFFLPSLKDQSEATVPKQPIATEISKP 768
Query: 536 SLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDH 595
+ K + ++F LLH + AF +Y+KSL P+ +D+E+R
Sbjct: 769 TAVASIK----VSGTEFSTLLHGNDD----DAFFEYLKSLGPAKIDLEIR---------- 810
Query: 596 QELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKL 655
LD P Y L ++ + +S R +FE +QA + +F K H + + H +D
Sbjct: 811 -SLDAYPPYEEFILFINIMTRRLSKRRDFELVQACMSVFTKSHEDVLLMHDTPEDTVPVF 869
Query: 656 LEVQSAVWQKIDK 668
+++ W+ + K
Sbjct: 870 ESLKA--WESVHK 880
>sp|Q8NI36|WDR36_HUMAN WD repeat-containing protein 36 OS=Homo sapiens GN=WDR36 PE=1 SV=1
Length = 951
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 232/692 (33%), Positives = 372/692 (53%), Gaps = 39/692 (5%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +T+++F +DG P++A+G+ G I +W+LE ++L + +R AH AI L F EP+L+
Sbjct: 290 GPITSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLV 349
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSV 121
+ ADN++++WIFD G+ RLLRFR GHSAP IR+Y NG+ ILSA QD + FS
Sbjct: 350 TNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTNIRYYGQNGQQILSASQDGTLQSFST 409
Query: 122 IQDQQSRELSQRHVAKRARKLKMKEEEL--KLKPVIAFDCAEIRERDWCNVVTCHMDTAQ 179
+ ++ ++ L + K+ K K + + +L P+ F E RE DW ++ CH
Sbjct: 410 VHEKFNKSLGHGLINKKRVKRKGLQNTMSVRLPPITKFAAEEARESDWDGIIACHQGKLS 469
Query: 180 AYVWRLQNFVLGEHILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 237
W Q +G + L+P ++ A I++CGNFAV+G + G ++ +N+QSGI R
Sbjct: 470 CSTWNYQKSTIGAYFLKPKELKKDDITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHR 529
Query: 238 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV 297
GS+ + AH G V GVA D N L ++ G G +K W+FK + L + S
Sbjct: 530 GSF-----GKDQAHKGSVRGVAVDGLNQLTVTTGSEGLLKFWNFKNKILIHSVSLSSSPN 584
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
++ HR +G+L DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD
Sbjct: 585 IMLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDC 644
Query: 358 SLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID 417
S+R WD+ ID +D + +S+SP D LAT+HVD G+YLW N ++
Sbjct: 645 SIRTWDLPSGCLIDCFLLDSAPLNVSMSPTGDFLATSHVDHLGIYLWSNISLY------- 697
Query: 418 SYASGKEIVSVKMPSVSSVEG---CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVT 474
S S + + + +PS+ + G QD S+ V +D + + + P +Q LVT
Sbjct: 698 SVVSLRPLPADYVPSIVMLPGTCQTQDVEVSEETVEPSDELIE--YDSP--EQLNEQLVT 753
Query: 475 LSLLPKSQWQSLINLDIIKARNKPIEPPKKPEKAPFFLPSVPSLSGEILFKPSESTKEDT 534
LSLLP+S+W++L+NLD+IK +NKP EPPK P+ APFF+P++P L + + +
Sbjct: 754 LSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNNDPQQS 813
Query: 535 ESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDD 594
+ + +G + S F L + + +K PS ++ ELR L D
Sbjct: 814 KVVNLGVLAQK----SDFCLKLEEGLVNNKYDTALNLLKESGPSGIETELRSL---SPDC 866
Query: 595 HQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKAR 653
++ +L I ++LD + +FE QA + LFLK+H + + L ++
Sbjct: 867 GGSIEVMQSFLKMIGMMLDR-------KRDFELAQAYLALFLKLHLKMLPSEPVLLEEIT 919
Query: 654 KLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 685
L W + +F + C++++L ++ L
Sbjct: 920 NLSSQVEENWTHLQSLFNQSMCILNYLKSALL 951
>sp|Q06078|UTP21_YEAST U3 small nucleolar RNA-associated protein 21 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP21 PE=1
SV=1
Length = 939
Score = 328 bits (841), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 220/690 (31%), Positives = 347/690 (50%), Gaps = 70/690 (10%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRR----LQSVIREAHDNAIISLHFFANEPV 60
+++L+F +DG L+ G SSG + ++L++R L+++ RE++ + F +P+
Sbjct: 251 ISSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESY-GGVTQATFLNGQPI 309
Query: 61 LMSASADNSIKMWIFDTT----DGD-----PRLLRFRSGHSAPPLCIRFYANGRH-ILSA 110
++++ DNS+K ++FD + GD PR LR R GHS PP I F + H +LSA
Sbjct: 310 IVTSGGDNSLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIAFADSQSHFMLSA 369
Query: 111 GQDRAFRLFSVIQDQQSRELSQR-HVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCN 169
+DR+ FS+ +D QS+E+SQR H + ++ + K ++A R +W N
Sbjct: 370 SKDRSLWSFSLRKDAQSQEMSQRLHKKQDGGRVGGSTIKSKFPEIVALAIENARIGEWEN 429
Query: 170 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 229
++T H D A W ++N +G + VK+ +S CGNF +G++ G I +
Sbjct: 430 IITAHKDEKFARTWDMRNKRVGRWTFDTTDDG--FVKSVAMSQCGNFGFIGSSNGSITIY 487
Query: 230 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
N+QSGI R Y H V G++ D N M+S G G + +DF L +
Sbjct: 488 NMQSGILRKKY--------KLHKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKSTLLGK 539
Query: 290 WEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKW 349
++ + +VYHR + L A DDL I + D V R+VR+ GH++RIT F FS +G+W
Sbjct: 540 LKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRW 599
Query: 350 LLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCM 409
++S+ +D ++R WD+ ID I VD T + SPN D+LAT HV NG+ +W NR
Sbjct: 600 IVSASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIWTNRAQ 659
Query: 410 FSGDS--NIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQ 467
F S ID E + +PS +SV G S + + + + F T +
Sbjct: 660 FKTVSTRTIDE----SEFARMALPS-TSVRGNDSMLSGALESNGGEDLNDIDFNTYTSLE 714
Query: 468 QI-PDLVTLSLLPKSQWQSLINLDIIKARNKPIEPPKKPEKAPFFLPSVPSLSGEILF-- 524
QI +L+TLS+ P+S+ +L++LD+I+ R+KP E PKK EK PFFL LSGE +
Sbjct: 715 QIDKELLTLSIGPRSKMNTLLHLDVIRKRSKPKEAPKKSEKLPFFL----QLSGEKVGDE 770
Query: 525 ----------KPSESTKEDTESLKV------GNKTKPDIPV---SQFIQLLHSCAEMKNF 565
P E + D E+ K NK K + S F + L ++ K++
Sbjct: 771 ASVREGIAHETPEEIHRRDQEAQKKLDAEEQMNKFKVTGRLGFESHFTKQLREGSQSKDY 830
Query: 566 SAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISCRNNFE 625
S+ + + SP+ +D+E+R L + D I +D L + NFE
Sbjct: 831 SSLLATLINFSPAAVDLEIRSLNSFEPFDE-----------IVWFIDALTQGLKSNKNFE 879
Query: 626 FIQAVIRLFLKIHGETVRCHTKLQDKARKL 655
+ + L K HG+ + + K QD A L
Sbjct: 880 LYETFMSLLFKAHGDVIHANNKNQDIASAL 909
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 189/436 (43%), Gaps = 55/436 (12%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV +++FS DGQ + ASG S I +W L I H+ + +++F + L S
Sbjct: 1115 AVYSVSFSPDGQTI-ASGGSDKTIKLWQTSDGTLLKTI-TGHEQTVNNVYFSPDGKNLAS 1172
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS+D+SIK+W DTT G +LL +GHSA + +RF +G+ I + +D+ +L+
Sbjct: 1173 ASSDHSIKLW--DTTSG--QLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLW---- 1224
Query: 124 DQQSRELSQRHVAKRARKLKMKEE---ELKLKP---VIAFDCAEIRERDW-------CNV 170
R K + L ++ L P +A A+ + W
Sbjct: 1225 --------HRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKT 1276
Query: 171 VTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGG-WIERF 229
+ H D+ VW + G+ I +N +K G +GG + F
Sbjct: 1277 LKGHNDS----VWDVNFSSDGKAIASASRDN--TIKLWNRHGIELETFTGHSGGVYAVNF 1330
Query: 230 NLQSGISRGSYLDMSER----------SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
S I + LD + R A N V V+ +++ +AG G+I++W
Sbjct: 1331 LPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLW 1390
Query: 280 DFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRIT 339
+ L ++ I + L+A+ D ++++ V + ++ GH + +
Sbjct: 1391 HSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVN 1450
Query: 340 DFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVD 397
FS DGK L S+ D ++++W+V + + H D + +S SP+ ++A+A D
Sbjct: 1451 KVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTD-EVFWVSFSPDGKIIASASAD 1509
Query: 398 QNGVYLWVNRCMFSGD 413
+ + LW + FSG+
Sbjct: 1510 KT-IRLWDS---FSGN 1521
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 164/404 (40%), Gaps = 50/404 (12%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V +L+FS DG+ L AS ++ I +W + +L ++ H++++ ++F ++ + SA
Sbjct: 1242 VNSLSFSPDGKTL-ASASADKTIKLWRIADGKLVKTLK-GHNDSVWDVNFSSDGKAIASA 1299
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S DN+IK+W + L +GHS + F + I SA D RL+
Sbjct: 1300 SRDNTIKLWNRHGIE-----LETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLW----- 1349
Query: 125 QQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWR 184
QR + L + + D + T D +W
Sbjct: 1350 -------QRPLISPLEVLAGNSGVYAVSFL----------HDGSIIATAGAD-GNIQLWH 1391
Query: 185 LQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMS 244
Q+ L L+ P N A+ + + G+ A ++ + ++ G + + +
Sbjct: 1392 SQDGSL----LKTLPGN-KAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLI--- 1443
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
H+ EV V + SA +K+W+ K + V V
Sbjct: 1444 -----GHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSP 1498
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW- 362
+G ++A+ + D IRL+D + +++ H D + F+ DG L S+ D ++++W
Sbjct: 1499 DGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWR 1558
Query: 363 --DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D L H +V + + S SP+ +A+A D+ V +W
Sbjct: 1559 SHDGHLLHTFSG-HSNV-VYSSSFSPDGRYIASASEDKT-VKIW 1599
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 8 LAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASAD 67
++FS DG+ ++AS ++ I +W+ L + AH++ + S++F + +L S SAD
Sbjct: 1494 VSFSPDGK-IIASASADKTIRLWDSFSGNLIKSL-PAHNDLVYSVNFNPDGSMLASTSAD 1551
Query: 68 NSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++K+W D LL SGHS F +GR+I SA +D+ +++ +
Sbjct: 1552 KTVKLW----RSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQI 1601
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 18/208 (8%)
Query: 239 SYLDMSERSNY-AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV 297
+ +M ER+ H V+ ++ + S IK+W GR ++ ++
Sbjct: 1058 ALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRTLNGHEDAVY 1117
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
+ + +A+ D I+L+ +++ GH + + FS DGK L S+ D
Sbjct: 1118 SVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDH 1177
Query: 358 SLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQ----------------NG 400
S+++WD + + + + + SP+ +A D+ NG
Sbjct: 1178 SIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNG 1237
Query: 401 VYLWVNRCMFSGDSNIDSYASGKEIVSV 428
WVN FS D + AS + + +
Sbjct: 1238 HQDWVNSLSFSPDGKTLASASADKTIKL 1265
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNGLL 308
H EV V+ ++ SA I++WD F G +KS + + ++ +L
Sbjct: 1486 GHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSML 1545
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
A+ + D ++L+ ++ F GH++ + FS DG+++ S+ D +++IW +
Sbjct: 1546 ASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQI 1601
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 33 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 92
E+ RL E H + +IS+ + + S S D +IK+W D RL R +GH
Sbjct: 1064 ERNRL-----EGHKDGVISISISRDGQTIASGSLDKTIKLW-----SRDGRLFRTLNGHE 1113
Query: 93 APPLCIRFYANGRHILSAGQDRAFRLF 119
+ F +G+ I S G D+ +L+
Sbjct: 1114 DAVYSVSFSPDGQTIASGGSDKTIKLW 1140
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++ F+ DG +LAS ++ + +W L H N + S F + + SA
Sbjct: 1533 VYSVNFNPDGS-MLASTSADKTVKLWRSHDGHLLHTF-SGHSNVVYSSSFSPDGRYIASA 1590
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D ++K+W D LL H A + F +G+ ++S D +++ D
Sbjct: 1591 SEDKTVKIWQIDG-----HLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRF--D 1643
Query: 125 QQSRELSQ 132
Q + SQ
Sbjct: 1644 SQQAKTSQ 1651
Score = 33.1 bits (74), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AHN V V + +++ S +K+W L + ++V +G +
Sbjct: 1528 AHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYI 1587
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
A+ ++D ++++ + ++ H + FS DGK L+S +D + +IW
Sbjct: 1588 ASASEDKTVKIWQIDG-HLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIW 1640
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 166/403 (41%), Gaps = 45/403 (11%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V + FS DG+ L + GA V +W++ + H++ + S+ F + L SA
Sbjct: 687 VRFVVFSPDGEILASCGADENV-KLWSVRDGVCIKTL-TGHEHEVFSVAFHPDGETLASA 744
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D +IK+W D DG L+ +GH+ C+ F +G + S+ D +L+ V Q
Sbjct: 745 SGDKTIKLW--DIQDGT--CLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQG 800
Query: 125 QQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWR 184
+ R L R+ + L A + + W
Sbjct: 801 KCLRTLKSHTGWVRSVAFSADGQTL------ASGSGDRTIKIW----------------- 837
Query: 185 LQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMS 244
N+ GE L+ + +V + S V G+ I+ ++ Q+ I
Sbjct: 838 --NYHTGE-CLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICI------- 887
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHR 303
++ + H EV VA + +++W+ + G+ LK+ + + + +
Sbjct: 888 -KTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSP 946
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+LA+ ++D ++L+D + + EGHTD I FS D + L S+ D S+R+W+
Sbjct: 947 DRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWN 1006
Query: 364 VILAR--QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + QI H D + A+ P ++AT D V LW
Sbjct: 1007 ISTGQCFQILLEHTDW-VYAVVFHPQGKIIATGSADCT-VKLW 1047
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 168/414 (40%), Gaps = 63/414 (15%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G + + AFS +GQ LLA+ + + +W ++ +L + R H N + + F + +L
Sbjct: 643 GNILSAAFSPEGQ-LLATCDTDCHVRVWEVKSGKLLLICR-GHSNWVRFVVFSPDGEILA 700
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S AD ++K+W D ++ +GH + F+ +G + SA D+ +L+ I
Sbjct: 701 SCGADENVKLWSVR----DGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWD-I 755
Query: 123 QDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMD------ 176
QD + H DW V D
Sbjct: 756 QDGTCLQTLTGHT------------------------------DWVRCVAFSPDGNTLAS 785
Query: 177 TAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGIS 236
+A + +L + G+ LR + V++ SA G G+ I+ +N +G
Sbjct: 786 SAADHTIKLWDVSQGK-CLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGEC 844
Query: 237 RGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG----RDLKSRWEV 292
+Y+ H V +A + +++S IK+WD + + L
Sbjct: 845 LKTYI--------GHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNE 896
Query: 293 GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLS 352
CS + + LA V+ D +RL++ + ++ + G+TD FS D + L S
Sbjct: 897 VCS---VAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILAS 953
Query: 353 SGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD + I ++ H D I ++ SP+ LA+A D + V LW
Sbjct: 954 GSNDKTVKLWDWQTGKYISSLEGHTDF-IYGIAFSPDSQTLASASTDSS-VRLW 1005
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 178/405 (43%), Gaps = 47/405 (11%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++A+S D + +L SG+ I +W+ + + H N + S+ F + L
Sbjct: 854 SVYSIAYSPDSK-ILVSGSGDRTIKLWDCQTHICIKTL-HGHTNEVCSVAFSPDGQTLAC 911
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG-QDRAFRLFSVI 122
S D S+++W T + L+ G++ L + F + R IL++G D+ +L+
Sbjct: 912 VSLDQSVRLWNCRT----GQCLKAWYGNTDWALPVAFSPD-RQILASGSNDKTVKLW--- 963
Query: 123 QDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYV 182
D Q+ + + E IAF D + + D++
Sbjct: 964 -DWQT-----------GKYISSLEGHTDFIYGIAF------SPDSQTLASASTDSSV--- 1002
Query: 183 WRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLD 242
RL N G+ + E+ V A G G+A ++ +N+ +G +
Sbjct: 1003 -RLWNISTGQ-CFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKT--- 1057
Query: 243 MSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVY 301
+SE H+ +++G+A L+ SA +++WD GR + + ++
Sbjct: 1058 LSE-----HSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIF 1112
Query: 302 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 361
++AT + D ++++D + ++ GHT+ + D FS DGK L S+ D ++RI
Sbjct: 1113 SPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRI 1172
Query: 362 WDVILAR--QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
WDV + I H + +++++ SP+ +V+A+ DQ V +W
Sbjct: 1173 WDVNTGKCHHICIGHTHL-VSSVAFSPDGEVVASGSQDQT-VRIW 1215
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 146/375 (38%), Gaps = 69/375 (18%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA--IISLHFFANEPVLM 62
V ++AFS DGQ L V +WN R ++ + N + + F + +L
Sbjct: 897 VCSVAFSPDGQTLACVSLDQSV-RLWNC---RTGQCLKAWYGNTDWALPVAFSPDRQILA 952
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S S D ++K+W + T + + GH+ I F + + + SA D + RL+++
Sbjct: 953 SGSNDKTVKLWDWQT----GKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNIS 1008
Query: 123 QDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEI--RERDWCNVVTCH------ 174
Q C +I DW V H
Sbjct: 1009 TGQ---------------------------------CFQILLEHTDWVYAVVFHPQGKII 1035
Query: 175 -MDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQS 233
+A V +L N G+ L+ E+ + S G +A + ++ +
Sbjct: 1036 ATGSADCTV-KLWNISTGQ-CLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCT 1093
Query: 234 GISRGSYLDMSER---SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSR 289
G G S R + ++ NGE++ C + T +K+WD++ G+ LK+
Sbjct: 1094 GRCVGILRGHSNRVYSAIFSPNGEIIAT-CSTDQT----------VKIWDWQQGKCLKTL 1142
Query: 290 WEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKW 349
+ I + +LA+ + D +R++DV + GHT ++ FS DG+
Sbjct: 1143 TGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEV 1202
Query: 350 LLSSGMDGSLRIWDV 364
+ S D ++RIW+V
Sbjct: 1203 VASGSQDQTVRIWNV 1217
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
LLAT D +R+++V + +++ GH++ + FS DG+ L S G D ++++W V
Sbjct: 656 LLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRD 715
Query: 367 ARQIDAIHV-DVSITALSLSPNMDVLATAHVD--------QNGVYL--------WVNRCM 409
I + + + +++ P+ + LA+A D Q+G L WV
Sbjct: 716 GVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVA 775
Query: 410 FSGDSNIDSYASGKEIVSVKMPSVS 434
FS D N + AS ++K+ VS
Sbjct: 776 FSPDGN--TLASSAADHTIKLWDVS 798
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLL 308
H V + +S+ +++ G +++WD + + L++ S+ + +H + L
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D I+L+DV V +++GHT + FS DGKWL S+ D ++++WD+I +
Sbjct: 121 ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK 180
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
I S + + PN +LA+ D+ V LW
Sbjct: 181 MITEFTSHTSAVNVVQFHPNEYLLASGSADRT-VKLW 216
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN 305
R+ H + + + S +IK+WD + + R++ V+ + +
Sbjct: 99 RTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPD 158
Query: 306 G-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
G LA+ +DD ++L+D++A +M+ +F HT + F + L S D ++++WD+
Sbjct: 159 GKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Query: 365 ILARQIDAIHVDVSIT-ALSLSPNMDVLATAHVDQNGVYLW-VNRCM 409
I + + + ++ +P+ L + + VY W +RC
Sbjct: 219 EKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPDRCF 265
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
LLAT +D + ++ V + GHT + F+ + +++ + GSLR+WD+
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA 94
Query: 367 ARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLWVNR---CMF 410
A+ + + SI++L P + LA+ VD N + LW R C+F
Sbjct: 95 AKILRTLMGHKASISSLDFHPMGEYLASGSVDSN-IKLWDVRRKGCVF 141
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV LAFS DG+ LAS + + +W+L ++ + +H +A+ + F NE +L S
Sbjct: 149 AVRCLAFSPDGK-WLASASDDSTVKLWDLIAGKMITEF-TSHTSAVNVVQFHPNEYLLAS 206
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
SAD ++K+W + + ++ G + + F +G L +G + R++
Sbjct: 207 GSADRTVKLWDLEKFN----MIGSSEGETGVVRSVLFNPDG-SCLYSGSENTLRVY 257
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLHFFANEPV 60
+ ++++L F G+ LASG+ I +W++ RR V R + H A+ L F +
Sbjct: 105 KASISSLDFHPMGE-YLASGSVDSNIKLWDV--RRKGCVFRYKGHTQAVRCLAFSPDGKW 161
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
L SAS D+++K+W D G +++ + H++ ++F+ N + S DR +L+
Sbjct: 162 LASASDDSTVKLW--DLIAG--KMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLW 216
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V++L LLA+G ++IW + K + H +A+ + F ++E +++
Sbjct: 23 VSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSL-TGHTSAVGCIQFNSSEERVVAG 81
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S+++W + ++LR GH A + F+ G ++ S D +L+ V
Sbjct: 82 SLSGSLRLWDLEAA----KILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV 134
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 126/332 (37%), Gaps = 40/332 (12%)
Query: 32 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 91
LE LQ + H +A+ + F + L S+SAD + +W F R ++ GH
Sbjct: 5 LEDPALQRHFK-GHKDAVTYVDFSPDGKQLASSSADACVMIWNFKPQS---RAYKY-PGH 59
Query: 92 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKL 151
C++F +G + S+ +DR RL+ A +K + LK
Sbjct: 60 KEAVTCVQFSPSGHLVASSSKDRTVRLW-------------------APNIKGESSVLKA 100
Query: 152 KPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTIS 211
+ C D +T D W L + L E+ V+ S
Sbjct: 101 HTAVV-RCVNFSS-DGHTFITA-SDDKSIKAWNLHR----QRFLYSLTEHTNWVRCARFS 153
Query: 212 ACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAG 271
G + + +++ + + +++D SNY V + T + SAG
Sbjct: 154 PDGRLIASCSDDKTVRIWDITNRLCINTFVDYKGHSNY--------VDFNPMGTCVASAG 205
Query: 272 YHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRK 330
+KVWD + L ++V + V + +H L T ++D +++ D++ R++
Sbjct: 206 VDSTVKVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASNDGTVKILDLLEGRLIYT 265
Query: 331 FEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
GH + FS+ G S D + +W
Sbjct: 266 LHGHQGPVLSVAFSKSGDQFASGATDAQVLVW 297
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS DG+ L +S A + V+ IWN K + ++ H A+ + F + ++
Sbjct: 18 KDAVTYVDFSPDGKQLASSSADACVM-IWNF-KPQSRAYKYPGHKEAVTCVQFSPSGHLV 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S+S D ++++W G+ +L+ H+A C+ F ++G ++A D++ + +++
Sbjct: 76 ASSSKDRTVRLWA-PNIKGESSVLK---AHTAVVRCVNFSSDGHTFITASDDKSIKAWNL 131
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G L+AS + + +W + SV++ AH + ++F ++
Sbjct: 60 KEAVTCVQFSPSGH-LVASSSKDRTVRLWAPNIKGESSVLK-AHTAVVRCVNFSSDGHTF 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D SIK W R L + H+ C RF +GR I S D+ R++ +
Sbjct: 118 ITASDDKSIKAWNLHRQ----RFLYSLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDI 173
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S I+A IK W+ + + V+ +G L+
Sbjct: 100 AHTAVVRCVNFSSDGHTFITASDDKSIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLI 159
Query: 309 ATVADDLVIRLFDVVALRMVRKF---EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
A+ +DD +R++D+ + F +GH++ + F+ G + S+G+D ++++WD+
Sbjct: 160 ASCSDDKTVRIWDITNRLCINTFVDYKGHSNYVD---FNPMGTCVASAGVDSTVKVWDIR 216
Query: 366 LARQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + V + + +LS P+ + L TA D
Sbjct: 217 TNKLLQHYQVHNAGVNSLSFHPSGNYLLTASND 249
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSITALSLS 385
+ R F+GH D +T FS DGK L SS D + IW+ +R ++T + S
Sbjct: 10 LQRHFKGHKDAVTYVDFSPDGKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFS 69
Query: 386 PNMDVLATAHVDQNGVYLWV 405
P+ ++A++ D+ V LW
Sbjct: 70 PSGHLVASSSKDRT-VRLWA 88
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 12/203 (5%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
+R H V V + S+ + +W+FK + ++ V V
Sbjct: 11 QRHFKGHKDAVTYVDFSPDGKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSP 70
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+G L+A+ + D +RL+ + HT + FS DG +++ D S++ W+
Sbjct: 71 SGHLVASSSKDRTVRLWAPNIKGESSVLKAHTAVVRCVNFSSDGHTFITASDDKSIKAWN 130
Query: 364 VILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW--VNR-CM-----FSGDS 414
+ R + ++ + + SP+ ++A+ D V +W NR C+ + G S
Sbjct: 131 LHRQRFLYSLTEHTNWVRCARFSPDGRLIASC-SDDKTVRIWDITNRLCINTFVDYKGHS 189
Query: 415 N-IDSYASGKEIVSVKMPSVSSV 436
N +D G + S + S V
Sbjct: 190 NYVDFNPMGTCVASAGVDSTVKV 212
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV---YH 302
+S AH V+ + D TNTL+ + G G +KVWD G + + ++ + H
Sbjct: 97 KSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKH 156
Query: 303 RVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
+ +LA+ ADD +RL+D+ + R + FEGH+ I F G +LLS D ++++W
Sbjct: 157 QNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Query: 363 DV---ILARQIDAIHVDVSITALSLSPNMDVLATA 394
++ R I H +I ++ P +L TA
Sbjct: 217 NIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTA 251
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 168/410 (40%), Gaps = 74/410 (18%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNL-EKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
VTALA +SD + L+A+ S +++I+ + RR++S+ +AH+ +I++ +L +
Sbjct: 64 VTALAITSDSKKLIAA-FRSRLLTIYEIPSGRRIKSM--KAHETPVITMTIDPTNTLLAT 120
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSA--PPLCIRFYANGRHILSAGQDRAFRLFSV 121
A+ +K+W G FR GH LC + N + S D RL+ +
Sbjct: 121 GGAEGLVKVW---DIAGAYVTHSFR-GHGGVISALCFGKHQNTWVLASGADDSRVRLWDL 176
Query: 122 IQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAY 181
+ R L +P +F + R++ T Q
Sbjct: 177 NSSRSMAVFEGHSSVIRG---------LTFEPTGSFLLSGSRDK-----------TVQ-- 214
Query: 182 VWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAG--GWIERFNLQSGISRGS 239
VW ++ +R P + ++ +L TAG I ++ +SG S
Sbjct: 215 VWNIKK----RSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSG----S 266
Query: 240 YLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKI 299
LD + ++ ++ V S NTL+ H D+ + L + G + I
Sbjct: 267 RLDPGVDTTHSETNAIIQVVPFSENTLL---SVHSDLSL-------LLRKRVPGEGFITI 316
Query: 300 VYHRVNGLL------ATVADDLV-----IRLFDVVALRMVRKF---EGHTDRITDFCFSE 345
++NG A + DD + DV++ + F EGHTD + SE
Sbjct: 317 --KKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSE 374
Query: 346 DGKWLLSSGMDGSLRIWDVILARQI-DAIHV----DVSITALSLSPNMDV 390
DG WL + D ++R+W++ + + IHV S+TA++L P +DV
Sbjct: 375 DGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGP-LDV 423
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 226 IERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD 285
++RFNL S +++ + + + + AH+ +V + ++ SA IK+WD +
Sbjct: 439 LKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGE 498
Query: 286 L------KSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRIT 339
+ R CS ++ + LA+ + D IR+++V + V+ EGHT I
Sbjct: 499 VVGVLRGHRRGVWACS-----FNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAIL 553
Query: 340 DFCFSEDGKWLLSSGMDGSLRIW 362
+ G ++S+ DG +++W
Sbjct: 554 KLIYISQGTQVVSAAADGLVKVW 576
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 283 GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFC 342
GR +KS ++ + N LLAT + +++++D+ + F GH I+ C
Sbjct: 93 GRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALC 152
Query: 343 FSE-DGKWLLSSGMDGS-LRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQN 399
F + W+L+SG D S +R+WD+ +R + S I L+ P L + D+
Sbjct: 153 FGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKT 212
Query: 400 GVYLW 404
V +W
Sbjct: 213 -VQVW 216
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
LASG+ I IWN++ ++ + E H AI+ L + + ++SA+AD +K+W +
Sbjct: 522 LASGSGDRTIRIWNVDTQQCVQTL-EGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSS 580
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 137
+ L H + +G ++S G D ++ +++++ ++AK
Sbjct: 581 GECVATL----DNHEDRVWALASRFDGSLLVSGGADAVVSVW--------KDVTEEYIAK 628
Query: 138 RARKLKMKEEELKL 151
+A +L+ + E +L
Sbjct: 629 QAEELERRVEAEQL 642
Score = 39.3 bits (90), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 3 GAVTALAFSSDGQP-LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
G ++AL F +LASGA + +W+L R +V E H + I L F L
Sbjct: 146 GVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVF-EGHSSVIRGLTFEPTGSFL 204
Query: 62 MSASADNSIKMW 73
+S S D ++++W
Sbjct: 205 LSGSRDKTVQVW 216
Score = 36.2 bits (82), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 41 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAP------ 94
+ E H + +++L + L + + DN++++W + D + + +GH+A
Sbjct: 359 VLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVAL 418
Query: 95 -PLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 135
PL + Y + S+ QDR + F++ + S R V
Sbjct: 419 GPLDVNGYPT--FLASSSQDRTLKRFNLGSQLNKSDFSNRAV 458
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+AHD + ++ + ++ SAS D +IK+W D++ G+ ++ GH F
Sbjct: 462 KAHDRDVNAIQVSKDGRIIASASQDKTIKLW--DSSTGE--VVGVLRGHRRGVWACSFNP 517
Query: 103 NGRHILSAGQDRAFRLFSVIQDQ 125
R + S DR R+++V Q
Sbjct: 518 FSRQLASGSGDRTIRIWNVDTQQ 540
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 137/353 (38%), Gaps = 47/353 (13%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H AI S F N + +AS D + +W + R R+ GH ++F
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLW---SLKPHARAYRY-VGHKDVVTSLQFSP 70
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEI 162
G + SA +DR RL+ + RK K E + PV + D +
Sbjct: 71 QGNLLASASRDRTVRLWVL-----------------DRKGKSSEFKAHTAPVRSVDFSA- 112
Query: 163 RERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTA 222
D +VT D + VW + + L + V+ S G V +
Sbjct: 113 ---DGQLLVTASEDKS-IKVWSM----FRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 223 GGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK 282
I+ ++ + ++ D +N+ V + T + SAG +K+WD +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANF--------VDFNPNGTCIASAGSDHAVKIWDIR 216
Query: 283 GRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 341
L ++V C + + +H + L T + D +++ D++ R++ +GHT +
Sbjct: 217 MNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTV 276
Query: 342 CFSEDGKWLLSSGMDGSLRIWDVIL--------ARQIDAIHVDVSITALSLSP 386
FS+DG+ L S G D + IW R + +H + S L + P
Sbjct: 277 SFSKDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRLHFEASPHLLDIYP 329
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ A+T+ FS + + + A+ + + +W+L K ++ H + + SL F +L
Sbjct: 18 KAAITSADFSPNCKQI-ATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++W+ D H+AP + F A+G+ +++A +D++ +++S+
Sbjct: 76 ASASRDRTVRLWVLDRKGKSSEF----KAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131
Query: 122 IQDQ 125
+ +
Sbjct: 132 FRQR 135
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH V V + L+++A IKVW F+ R L S + V+ +G L
Sbjct: 100 AHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYR-HTHWVRCAKFSPDGRL 158
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+ + ++D I+++D + V F F+ +G + S+G D +++IWD+ +
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMN 218
Query: 368 RQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + V + LS P + L TA D
Sbjct: 219 KLLQHYQVHSCGVNCLSFHPLGNSLVTASSD 249
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
H V + L+ SA +++W + S ++ + V+ V +G LL
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLL 117
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
T ++D I+++ + R + HT + FS DG+ ++S D +++IWD +
Sbjct: 118 VTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 369 QIDAIHVDVSITA-LSLSPNMDVLATAHVDQNGVYLW 404
++ V + +PN +A+A D + V +W
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSD-HAVKIW 213
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 249 YAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL- 307
Y H V L++S IK+WD + + + V NG
Sbjct: 141 YRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTC 200
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+A+ D ++++D+ ++++ ++ H+ + F G L+++ DG++++ D+I
Sbjct: 201 IASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
Query: 368 RQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
R I + + +S S + ++L + D V +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQ-VLIW 297
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISLHFFANEPVLMS 63
V ++ FS+DGQ LL + + I +W++ ++R L S+ R H + F + +++S
Sbjct: 105 VRSVDFSADGQ-LLVTASEDKSIKVWSMFRQRFLYSLYRHTH--WVRCAKFSPDGRLIVS 161
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S D +IK+W DTT+ + + S + F NG I SAG D A +++ +
Sbjct: 162 CSEDKTIKIW--DTTNK--QCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDI 215
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G + F+ +G +AS S + IW++ +L + H + L F L+
Sbjct: 187 GFANFVDFNPNGT-CIASAGSDHAVKIWDIRMNKLLQHY-QVHSCGVNCLSFHPLGNSLV 244
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
+AS+D ++KM D +G RL+ GH+ P + F +G + S G D
Sbjct: 245 TASSDGTVKM--LDLIEG--RLIYTLQGHTGPVFTVSFSKDGELLTSGGAD 291
Score = 40.0 bits (92), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ERS H + + +A + + +W K R+ +V +
Sbjct: 11 ERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
G LLA+ + D +RL+ + +F+ HT + FS DG+ L+++ D S+++W
Sbjct: 71 QGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWS 130
Query: 364 VILARQIDAIH 374
+ R + +++
Sbjct: 131 MFRQRFLYSLY 141
>sp|Q5ZME8|SMU1_CHICK WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2
SV=1
Length = 513
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG++++W+V
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNV 378
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F + +L
Sbjct: 222 FSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ + D IK+W + L RF HS C+ F + ILSA D+ R+ +
Sbjct: 281 TGAQDGKIKVWKIQSGQC---LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLK 337
Query: 123 QDQQSREL 130
+ +E
Sbjct: 338 SGKTLKEF 345
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I++ + L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIRIHGLKS---GKTLKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKVWN 377
Query: 121 V 121
V
Sbjct: 378 V 378
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 119/321 (37%), Gaps = 39/321 (12%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ + F + L S+SAD + +W F R ++ GH C++F
Sbjct: 15 KGHKDAVTCVDFSPDSKQLASSSADACVMIWNFKPQS---RAYKY-PGHKEAVTCVQFSP 70
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEI 162
+G + S+ +DR RL++ +S L R + + A D I
Sbjct: 71 SGHLVASSSKDRTVRLWAPNIKGESTVLKAHTAVVRCVNFSSDGQTF----ITASDDKSI 126
Query: 163 RERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTA 222
+ W L + L ++ V+ S G +
Sbjct: 127 K------------------AWNLHR----QRFLFSLTQHTNWVRCARFSPDGRLIASCSD 164
Query: 223 GGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK 282
+ ++L + + +++D SNY V + T + SAG +KVWD +
Sbjct: 165 DKTVRIWDLTNRLCINTFVDYKGHSNY--------VDFNQMGTCVASAGADSTVKVWDIR 216
Query: 283 GRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 341
L ++V + + +H L T + D +++ D++ R++ GH +
Sbjct: 217 MNKLLQHYQVHNAGVSSLSFHPSGNYLLTASSDGTLKILDLLEGRLIYTLHGHQGPVLSV 276
Query: 342 CFSEDGKWLLSSGMDGSLRIW 362
FS+ G S D + +W
Sbjct: 277 TFSKSGDQFASGATDAQVLVW 297
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S I+A IK W+ + + V+ +G L+
Sbjct: 100 AHTAVVRCVNFSSDGQTFITASDDKSIKAWNLHRQRFLFSLTQHTNWVRCARFSPDGRLI 159
Query: 309 ATVADDLVIRLFDVVALRMVRKF---EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
A+ +DD +R++D+ + F +GH++ + F++ G + S+G D ++++WD+
Sbjct: 160 ASCSDDKTVRIWDLTNRLCINTFVDYKGHSNYVD---FNQMGTCVASAGADSTVKVWDIR 216
Query: 366 LARQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + + V + +++LS P+ + L TA D
Sbjct: 217 MNKLLQHYQVHNAGVSSLSFHPSGNYLLTASSD 249
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G L+AS + + +W + +S + +AH + ++F ++
Sbjct: 60 KEAVTCVQFSPSGH-LVASSSKDRTVRLW-APNIKGESTVLKAHTAVVRCVNFSSDGQTF 117
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D SIK W R L + H+ C RF +GR I S D+ R++ +
Sbjct: 118 ITASDDKSIKAWNLHRQ----RFLFSLTQHTNWVRCARFSPDGRLIASCSDDKTVRIWDL 173
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+G + F+ G + ++GA S + +W++ +L + H+ + SL F + L
Sbjct: 186 KGHSNYVDFNQMGTCVASAGADS-TVKVWDIRMNKLLQHY-QVHNAGVSSLSFHPSGNYL 243
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
++AS+D ++K I D +G RL+ GH P L + F +G S D
Sbjct: 244 LTASSDGTLK--ILDLLEG--RLIYTLHGHQGPVLSVTFSKSGDQFASGATD 291
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSITALSLS 385
+ R F+GH D +T FS D K L SS D + IW+ +R ++T + S
Sbjct: 10 LQRHFKGHKDAVTCVDFSPDSKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFS 69
Query: 386 PNMDVLATAHVDQNGVYLWV 405
P+ ++A++ D+ V LW
Sbjct: 70 PSGHLVASSSKDRT-VRLWA 88
>sp|Q99M63|SMU1_RAT WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1
PE=2 SV=1
Length = 513
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F + +L
Sbjct: 222 FSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ + D IK+W + L RF HS C+ F + ILSA D+ R+ +
Sbjct: 281 TGAQDGKIKVWKIQSGQC---LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLK 337
Query: 123 QDQQSREL 130
+ +E
Sbjct: 338 SGKTLKEF 345
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I++ + L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIRIHGLKS---GKTLKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
>sp|Q3UKJ7|SMU1_MOUSE WD40 repeat-containing protein SMU1 OS=Mus musculus GN=Smu1 PE=2
SV=2
Length = 513
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F + +L
Sbjct: 222 FSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ + D IK+W + L RF HS C+ F + ILSA D+ R+ +
Sbjct: 281 TGAQDGKIKVWKIQSGQC---LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLK 337
Query: 123 QDQQSREL 130
+ +E
Sbjct: 338 SGKTLKEF 345
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I++ + L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIRIHGLKS---GKTLKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
>sp|Q2TAY7|SMU1_HUMAN WD40 repeat-containing protein SMU1 OS=Homo sapiens GN=SMU1 PE=1
SV=2
Length = 513
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F + +L
Sbjct: 222 FSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ + D IK+W + L RF HS C+ F + ILSA D+ R+ +
Sbjct: 281 TGAQDGKIKVWKIQSGQC---LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLK 337
Query: 123 QDQQSREL 130
+ +E
Sbjct: 338 SGKTLKEF 345
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I++ + L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIRIHGLKS---GKTLKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
>sp|Q76B40|SMU1_CRIGR WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1
PE=2 SV=1
Length = 513
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F + +L
Sbjct: 222 FSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ + D IK+W + L RF HS C+ F + ILSA D+ R+ +
Sbjct: 281 TGAQDGKIKVWKIQSGQC---LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLK 337
Query: 123 QDQQSREL 130
+ +E
Sbjct: 338 SGKTLKEF 345
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I++ + L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIRIHGLKS---GKTLKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
>sp|Q2TBS9|SMU1_BOVIN WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1
Length = 513
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F + +L
Sbjct: 222 FSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ + D IK+W + L RF HS C+ F + ILSA D+ R+ +
Sbjct: 281 TGAQDGKIKVWKIQSGQC---LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLK 337
Query: 123 QDQQSREL 130
+ +E
Sbjct: 338 SGKTLKEF 345
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I++ + L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIRIHGLKS---GKTLKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
>sp|Q6NRT3|SMU1_XENLA WD40 repeat-containing protein SMU1 OS=Xenopus laevis GN=smu1 PE=2
SV=1
Length = 513
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F + +L
Sbjct: 222 FSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ + D IK+W + L RF HS C+ F + ILSA D+ R+ +
Sbjct: 281 TGAQDGKIKVWKIQSGQC---LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLK 337
Query: 123 QDQQSREL 130
+ +E
Sbjct: 338 SGKTLKEF 345
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I++ + L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIRIHGLKS---GKTLKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 276 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGH 334
I VWD D E V+ V +G LLA+ +DD +RL+DV A FEGH
Sbjct: 483 IHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGH 542
Query: 335 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLA 392
T + D FS DG + S DG+ R+W+V + + H D + A++ SP+ ++A
Sbjct: 543 THYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDY-VYAVAFSPDGSMVA 601
Query: 393 TAHVDQNGVYLW 404
+ D + LW
Sbjct: 602 SGSRDGT-IRLW 612
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV-KIVYHRVNGLL 308
H V VA L+ S +++WD + ++ +E V I + ++
Sbjct: 499 GHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMV 558
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D RL++V +GHTD + FS DG + S DG++R+WDV +
Sbjct: 559 ASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGK 618
Query: 369 QIDAIHVDV-SITALSLSPNMDVLATAHVDQNGVYLW 404
+ D + ++ +L+ SP+ +L H + V+LW
Sbjct: 619 ERDVLQAPAENVVSLAFSPDGSML--VHGSDSTVHLW 653
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V A S G+ G+ G I +++ +G R +E VV +A
Sbjct: 588 VYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAEN--------VVSLAFSPDG 639
Query: 265 TLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVV 323
++++ G + +WD + +E V+ V +G LLA+ +DD IRL+DV
Sbjct: 640 SMLVH-GSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVA 698
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
A EGHT+ + F +G L S+ DG++RIW +
Sbjct: 699 AQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V A+AFS DG ++ASG+ G I +W++ + + V++ +N ++SL F + +L+
Sbjct: 588 VYAVAFSPDGS-MVASGSRDGTIRLWDVATGKERDVLQAPAEN-VVSLAFSPDGSMLVHG 645
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D+++ +W D G+ L GH+ + F +G + S DR RL+ V
Sbjct: 646 S-DSTVHLW--DVASGE--ALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQ 700
Query: 125 QQSREL 130
++ L
Sbjct: 701 EEHTTL 706
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V A+AFS DG LLASG+ + +W++ ++V E H + ++ + F + ++ S
Sbjct: 504 VRAVAFSPDGA-LLASGSDDATVRLWDVAAAEERAVF-EGHTHYVLDIAFSPDGSMVASG 561
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D + ++W T + +L+ GH+ + F +G + S +D RL+ V
Sbjct: 562 SRDGTARLWNV-ATGTEHAVLK---GHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATG 617
Query: 125 QQ 126
++
Sbjct: 618 KE 619
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V A+AFS DG LLASG+ I +W++ + + + E H + S+ F L SA
Sbjct: 671 VRAVAFSPDGA-LLASGSDDRTIRLWDVAAQEEHTTL-EGHTEPVHSVAFHPEGTTLASA 728
Query: 65 SADNSIKMWIFDT 77
S D +I++W T
Sbjct: 729 SEDGTIRIWPIAT 741
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 122/329 (37%), Gaps = 55/329 (16%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ S+ F N L S S D+ + +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKP---QTRAYRF-AGHKDAVTCVNFSP 71
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEI 162
+G + S +D+ R++ +K E V A +
Sbjct: 72 SGHLLASGSRDKTVRIWVP---------------------NVKGEST----VFRAHTATV 106
Query: 163 RERDWCN----VVTCHMDTAQAYVWRLQN----FVLGEHILRPCPENPTAVKACTISACG 214
R +C+ VT D VW F L +HI V+ S G
Sbjct: 107 RSVHFCSDGQSFVTA-SDDKTVKVWSTHRQKFLFSLSQHI--------NWVRCAKFSPDG 157
Query: 215 NFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHG 274
V + ++ ++ S SY + H G V V + T + +AG
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCE--------HGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 275 DIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEG 333
+KVWD + L +++ + V + +H L T + D +++ D++ R++ G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 269
Query: 334 HTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
H T FS G++ S G D + +W
Sbjct: 270 HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 112/278 (40%), Gaps = 40/278 (14%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++
Sbjct: 61 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W + + L S H C +F +GR I+SA D+ +L+
Sbjct: 119 VTASDDKTVKVW----STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 172
Query: 122 IQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAY 181
D+ SRE + E + F + C + MD
Sbjct: 173 --DKTSRECVHSYC-----------EHGGFVTYVDFHPSGT-----C-IAAAGMDNT-VK 212
Query: 182 VWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL 241
VW ++ L +H + AV A + GN+ V ++ ++ +L G R Y
Sbjct: 213 VWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG--RLLY- 265
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+ + H G VA T S G + VW
Sbjct: 266 -----TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S ++A +KVW + + V+ +G L+
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
+ +DD ++L+D + V + H +T F G + ++GMD ++++WDV R
Sbjct: 161 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHR 220
Query: 369 QIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + ++ ALS P+ + L TA D
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLVTASSD 250
Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 329 RKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID--AIHVDVSITALSLSP 386
R F+GH D +T FS + K L S MD L +W + + A H D ++T ++ SP
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKD-AVTCVNFSP 71
Query: 387 NMDVLATAHVDQNGVYLWV 405
+ +LA+ D+ V +WV
Sbjct: 72 SGHLLASGSRDKT-VRIWV 89
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 29/193 (15%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
LAT A+D +IR++D+ + + F GH I FS DG+ + S D ++R+WD+
Sbjct: 359 LATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETG 418
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFS-----GDSNIDSYAS- 421
+ + ++ +T +++SP+ +A +D++ V +W R + D + DS S
Sbjct: 419 QNTSVLSIEDGVTTVAISPDKQFVAAGSLDKS-VRVWDMRGYLAERLEGPDGHKDSVYSV 477
Query: 422 -----GKEIVS------VKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIP 470
G+ +VS +KM +S+ G SS P PK + TF+
Sbjct: 478 AFSPDGRNLVSGSLDKTIKMWELSAPRGIP---SSAP--------PKGGRCIKTFEGHRD 526
Query: 471 DLVTLSLLPKSQW 483
+++++L P SQW
Sbjct: 527 FVLSVALTPDSQW 539
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+ ++ FS DG+ LA+GA +I +W+++ R +++ H+ I SL F + + S
Sbjct: 347 IRSVCFSPDGK-YLATGAEDKLIRVWDIQSRTIRNTF-HGHEQDIYSLDFSRDGRTIASG 404
Query: 65 SADNSIKMWIFDT 77
S D ++++W +T
Sbjct: 405 SGDRTVRLWDIET 417
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 17/125 (13%)
Query: 255 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV----GCSLVKIVYHRVNGLLAT 310
V VA + + ++VWD +G L R E S+ + + L +
Sbjct: 430 VTTVAISPDKQFVAAGSLDKSVRVWDMRGY-LAERLEGPDGHKDSVYSVAFSPDGRNLVS 488
Query: 311 VADDLVIRLFDVVALR------------MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ D I+++++ A R ++ FEGH D + + D +W+LS D
Sbjct: 489 GSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGSKDRG 548
Query: 359 LRIWD 363
++ WD
Sbjct: 549 VQFWD 553
>sp|Q6P4J8|SMU1_XENTR WD40 repeat-containing protein SMU1 OS=Xenopus tropicalis GN=smu1
PE=2 SV=1
Length = 513
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 265 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 321
T M++ G G IKVW + R+E S + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDCSQILSASFDQTIRVHG 335
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFANEPVLM 62
FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F + +L
Sbjct: 222 FSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ + D IK+W + L RF HS C+ F + ILSA D+ R+ +
Sbjct: 281 TGAQDGKIKVWKIQSGQC---LRRFERAHSKGVTCLSFSKDCSQILSASFDQTIRVHGLK 337
Query: 123 QDQQSREL 130
+ +E
Sbjct: 338 SGKTLKEF 345
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 60
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDCSQ 321
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
++SAS D +I++ + L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIRVHGLKS---GKTLKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 121 V 121
+
Sbjct: 378 M 378
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 223 GGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK 282
GG ++ NL + + + +S H V V +S+ L+++ G +K++D +
Sbjct: 35 GGEDKKVNLWAVGKQNCIISLS-----GHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLE 89
Query: 283 -GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 341
+ +++ S+ + +H +A+ + D ++L+DV + ++GH+D++
Sbjct: 90 PAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMI 149
Query: 342 CFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV-SITALSLSPNMDVLATAHVDQNG 400
FS DGKWL+++ D ++++WD+ + + +T + PN +LA+ D+
Sbjct: 150 KFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRT- 208
Query: 401 VYLW 404
V W
Sbjct: 209 VQFW 212
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/141 (19%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 266 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVA 324
+ S ++K+WD + + ++ V ++ +G L T ++D I+L+D+
Sbjct: 115 FVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTM 174
Query: 325 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 383
++ ++F+ HT +T F + L S D +++ WD+ + + + S + ++S
Sbjct: 175 GKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSIS 234
Query: 384 LSPNMDVLATAHVDQNGVYLW 404
P+ L + D + W
Sbjct: 235 FHPDGSYLFCSSQDMLHAFGW 255
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 16/127 (12%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V + FS DG+ L + + I +W+L +L + H + + F NE +L S
Sbjct: 146 VNMIKFSPDGK-WLVTASEDTTIKLWDLTMGKLFQEFKN-HTGGVTGIEFHPNEFLLASG 203
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD----------R 114
S+D +++ W +T +L+ S ++ I F+ +G ++ + QD R
Sbjct: 204 SSDRTVQFWDLETF----QLVSSTSPGASAVRSISFHPDGSYLFCSSQDMLHAFGWEPIR 259
Query: 115 AFRLFSV 121
F FSV
Sbjct: 260 CFDTFSV 266
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++ F+S + L+ +G+ SG + I++LE ++ + H N+I + F + S
Sbjct: 62 VDSVKFNSSEE-LVVAGSQSGTMKIYDLEPAKIVRTL-TGHRNSIRCMDFHPFGEFVASG 119
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D ++K+W + GHS I+F +G+ +++A +D +L+ +
Sbjct: 120 STDTNVKLWDVRRKG----CIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMG 175
Query: 125 QQSREL 130
+ +E
Sbjct: 176 KLFQEF 181
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 181/443 (40%), Gaps = 64/443 (14%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V ++ FS DG+ +LASG+ + +W++ + + H + + S+ F N +L S
Sbjct: 909 VNSVGFSQDGK-MLASGSDDQTVRLWDISSGQCLKTFK-GHTSRVRSVVFSPNSLMLASG 966
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S+D ++++W D + G+ L GH+ + F +G + + D+ RL+ I
Sbjct: 967 SSDQTVRLW--DISSGE--CLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWD-ISS 1021
Query: 125 QQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWR 184
Q + Q H + R + V + D A ++ D +W
Sbjct: 1022 SQCFYIFQGHTSC-VRSV-----------VFSSDGA---------MLASGSDDQTVRLWD 1060
Query: 185 LQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSG---ISRGSYL 241
+ + + L + + V++ S G G + +++ SG + Y
Sbjct: 1061 ISS----GNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYT 1116
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVY 301
++ NG V +A S++ + +++WD + + + V V
Sbjct: 1117 SWVRFLVFSPNG--VTLANGSSDQI---------VRLWDISSKKCLYTLQGHTNWVNAVA 1165
Query: 302 HRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 360
+G LA+ + D +RL+D+ + + + +GHT + F+ DG L S D ++R
Sbjct: 1166 FSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVR 1225
Query: 361 IWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQN----------------GVYL 403
+W++ ++ + S + ++ +P+ +LA+ D+ G
Sbjct: 1226 LWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTN 1285
Query: 404 WVNRCMFSGDSNIDSYASGKEIV 426
WVN F+ D ++ + SG + V
Sbjct: 1286 WVNSVAFNPDGSMLASGSGDQTV 1308
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLL 308
H G V VA + +++ + +++WD ++ S V+ +V+ +L
Sbjct: 988 GHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAML 1047
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ +DD +RL+D+ + + +GHT + FS DG L S G D +R+WD+
Sbjct: 1048 ASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGN 1107
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVDQ----------------NGVYLWVNRCMFS 411
+ + S + L SPN LA DQ G WVN FS
Sbjct: 1108 CLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFS 1167
Query: 412 GDSNIDSYASGKEIVSVKMPSVSS 435
D + ASG +V++ +SS
Sbjct: 1168 PDGA--TLASGSGDQTVRLWDISS 1189
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 144/370 (38%), Gaps = 59/370 (15%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V A+AFS DG L ASG+ + +W++ + ++ + H + + S+ F + L S
Sbjct: 1161 VNAVAFSPDGATL-ASGSGDQTVRLWDISSSKCLYIL-QGHTSWVNSVVFNPDGSTLASG 1218
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S+D ++++W +++ + L GH++ + F +G + S D+ RL+ I
Sbjct: 1219 SSDQTVRLWEINSS----KCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWD-ISS 1273
Query: 125 QQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQ----- 179
+ Q H +W N V + D +
Sbjct: 1274 SKCLHTFQGHT------------------------------NWVNSVAFNPDGSMLASGS 1303
Query: 180 ----AYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGI 235
+W + + L + + V + T S G G+ + +++ SG
Sbjct: 1304 GDQTVRLWEISS----SKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGE 1359
Query: 236 SRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGC 294
++L H V V ++ S +++W G+ L +
Sbjct: 1360 CLYTFL--------GHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNN 1411
Query: 295 SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 354
+ IV+ LLA+ +DD +RL+++ + + GH + + FS DG L S
Sbjct: 1412 WVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGS 1471
Query: 355 MDGSLRIWDV 364
D ++++WDV
Sbjct: 1472 DDETIKLWDV 1481
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLL 308
H V V + + + S +++W+ ++ S V +V++ +L
Sbjct: 1198 GHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSML 1257
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D +RL+D+ + + + F+GHT+ + F+ DG L S D ++R+W++ ++
Sbjct: 1258 ASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSK 1317
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVDQN----------------GVYLWVNRCMFS 411
+ S +++++ SP+ +LA+ DQ G WV +FS
Sbjct: 1318 CLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFS 1377
Query: 412 GDSNIDSYASGKEIVSVKMPSVSS 435
D I + SG + +V++ S+SS
Sbjct: 1378 PDGAILASGSGDQ--TVRLWSISS 1399
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 253 GEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATV 311
G V+ VA L + G ++ W+ G++L + + + + + +LA+
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASG 924
Query: 312 ADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID 371
+DD +RL+D+ + + ++ F+GHT R+ FS + L S D ++R+WD I + +
Sbjct: 925 SDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWD-ISSGECL 983
Query: 372 AIHVDVSITALSLSPNMD--VLATAHVDQNGVYLW-----------------VNRCMFSG 412
I + S++ N+D +LAT DQ V LW V +FS
Sbjct: 984 YIFQGHTGWVYSVAFNLDGSMLATGSGDQT-VRLWDISSSQCFYIFQGHTSCVRSVVFSS 1042
Query: 413 DSNIDSYASGKEIVSVKMPSVSS 435
D + ASG + +V++ +SS
Sbjct: 1043 DGAM--LASGSDDQTVRLWDISS 1063
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-L 308
HN V V ++ S +++WD ++ S V+ V N L L
Sbjct: 904 GHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLML 963
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D +RL+D+ + + F+GHT + F+ DG L + D ++R+WD+ ++
Sbjct: 964 ASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQ 1023
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW---VNRCMFS 411
S + ++ S + +LA+ DQ V LW C+++
Sbjct: 1024 CFYIFQGHTSCVRSVVFSSDGAMLASGSDDQT-VRLWDISSGNCLYT 1069
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V ++AF+ DG +LA+G+ + +W++ + I + H + + S+ F ++ +L
Sbjct: 991 GWVYSVAFNLDGS-MLATGSGDQTVRLWDISSSQC-FYIFQGHTSCVRSVVFSSDGAMLA 1048
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S S D ++++W D + G+ L GH++ + F +G + S G D+ RL+ +
Sbjct: 1049 SGSDDQTVRLW--DISSGN--CLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDI 1103
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+++ +LA+ + D +RL+ + + + + +GH + + FS DG L S D +
Sbjct: 1374 VIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQT 1433
Query: 359 LRIWDVILARQIDAIHVDV-SITALSLSPNMDVLATAHVDQNGVYLW 404
+R+W++ + +H + S+ +++ S + +LA+ D+ + LW
Sbjct: 1434 VRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDET-IKLW 1479
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 265 TLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIRLFD 321
+L ++G H ++W F R R G + + +H + LAT + D +RL+
Sbjct: 396 SLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSI 379
VR F GH + FS +GK+L S+G D L++WD+ + H D SI
Sbjct: 455 AQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTD-SI 513
Query: 380 TALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGC 439
T+L+ SP+ ++A+A +D N V +W R S N + S E+V V +S+V
Sbjct: 514 TSLAFSPDSGLIASASMD-NSVRVWDIR---STCCNTPADGSSGELVGVYTGQMSNVLSV 569
Query: 440 Q 440
Q
Sbjct: 570 Q 570
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
ASG+ +W+ + R I H + + F N L + S D ++++W
Sbjct: 399 FASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+ +R +GH P L + F NG+++ SAG+D+ +L+ + +EL
Sbjct: 458 GNS----VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 506
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RG V +L+FS +G+ LAS + +W+L L +R H ++I SL F + ++
Sbjct: 468 RGPVLSLSFSPNGK-YLASAGEDQRLKLWDLASGTLFKELR-GHTDSITSLAFSPDSGLI 525
Query: 62 MSASADNSIKMWIFDTT------DGDP-RLLRFRSGHSAPPLCIRFYA 102
SAS DNS+++W +T DG L+ +G + L ++F A
Sbjct: 526 ASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMA 573
Score = 37.7 bits (86), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 66/187 (35%), Gaps = 70/187 (37%)
Query: 11 SSDGQPLLASGASSGVISIWNLEKRRLQS------------------------------- 39
SSD + LLA+G + I +W+L ++L+S
Sbjct: 277 SSDSK-LLAAGFDNSCIKLWSLRSKKLKSEPHHVDTSRIRLACDTLEEEENEEDNTGTEM 335
Query: 40 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-----------------IFD------ 76
I H + S F A+ L+S S D SI+ W ++D
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPF 395
Query: 77 -------TTDGDPRL--------LRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ D RL LR +GH A C++F+ N ++ + D+ RL+S
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 122 IQDQQSR 128
Q R
Sbjct: 456 QQGNSVR 462
Score = 37.0 bits (84), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 362
+GLL + ++D+ IR +D+ + ++GH + D S + S D + R+W
Sbjct: 355 SGLL-SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSF 413
Query: 363 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 414 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 453
>sp|P69104|GBLP_TRYBR Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei rhodesiense PE=2 SV=1
Length = 318
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V +S GNFAV + + +NLQ+G + +L H +V+ VA N
Sbjct: 70 VSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFL--------GHTKDVLSVAFSPDN 121
Query: 265 TLMISAGYHGDIKVWDFKG-------RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVI 317
++S G ++VW+ KG R + W S V+ ++ + D ++
Sbjct: 122 RQIVSGGRDNALRVWNVKGECMHTLSRGAHTDW---VSCVRFSPSLDAPVIVSGGWDNLV 178
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV 377
+++D+ R+V +GHT+ +T S DG SS DG R+WD+ + +
Sbjct: 179 KVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGA 238
Query: 378 SITALSLSPN 387
I + SPN
Sbjct: 239 PINQICFSPN 248
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA--NEPVLM 62
V ++AFS D + ++ SG + +WN++ + ++ R AH + + + F + PV++
Sbjct: 112 VLSVAFSPDNRQIV-SGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIV 170
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S DN +K+W T RL+ GH+ + +G S+ +D RL+ +
Sbjct: 171 SGGWDNLVKVWDLATG----RLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLT 226
Query: 123 QDQQSRELS 131
+ + E++
Sbjct: 227 KGEALSEMA 235
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 30 WNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 89
+ L RRL E H + + N +SAS D+S+++W + L
Sbjct: 56 YGLPDRRL-----EGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFL---- 106
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GH+ L + F + R I+S G+D A R+++V
Sbjct: 107 GHTKDVLSVAFSPDNRQIVSGGRDNALRVWNV 138
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 329 RKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
R+ EGH+ ++D S +G + +S+ D SLR+W++
Sbjct: 61 RRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNL 96
>sp|P69103|GBLP_TRYBB Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei brucei PE=2 SV=1
Length = 318
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 205 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 264
V +S GNFAV + + +NLQ+G + +L H +V+ VA N
Sbjct: 70 VSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFL--------GHTKDVLSVAFSPDN 121
Query: 265 TLMISAGYHGDIKVWDFKG-------RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVI 317
++S G ++VW+ KG R + W S V+ ++ + D ++
Sbjct: 122 RQIVSGGRDNALRVWNVKGECMHTLSRGAHTDW---VSCVRFSPSLDAPVIVSGGWDNLV 178
Query: 318 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV 377
+++D+ R+V +GHT+ +T S DG SS DG R+WD+ + +
Sbjct: 179 KVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGA 238
Query: 378 SITALSLSPN 387
I + SPN
Sbjct: 239 PINQICFSPN 248
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA--NEPVLM 62
V ++AFS D + ++ SG + +WN++ + ++ R AH + + + F + PV++
Sbjct: 112 VLSVAFSPDNRQIV-SGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIV 170
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S DN +K+W T RL+ GH+ + +G S+ +D RL+ +
Sbjct: 171 SGGWDNLVKVWDLATG----RLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLT 226
Query: 123 QDQQSRELS 131
+ + E++
Sbjct: 227 KGEALSEMA 235
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 30 WNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 89
+ L RRL E H + + N +SAS D+S+++W + L
Sbjct: 56 YGLPDRRL-----EGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFL---- 106
Query: 90 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
GH+ L + F + R I+S G+D A R+++V
Sbjct: 107 GHTKDVLSVAFSPDNRQIVSGGRDNALRVWNV 138
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 329 RKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
R+ EGH+ ++D S +G + +S+ D SLR+W++
Sbjct: 61 RRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNL 96
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 123/329 (37%), Gaps = 55/329 (16%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ + F N L S S D+++ +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS---RAYRF-TGHKDAVTCVNFSP 71
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEI 162
+G + S +D+ R++ +K E V A +
Sbjct: 72 SGHLLASGSRDKTVRIWVP---------------------NVKGEST----VFRAHTATV 106
Query: 163 RERDWCN----VVTCHMDTAQAYVWRLQN----FVLGEHILRPCPENPTAVKACTISACG 214
R +C+ +VT D VW F L +HI V+ S G
Sbjct: 107 RSVHFCSDGQSLVTA-SDDKTVKVWSTHRQRFLFSLTQHI--------NWVRCAKFSPDG 157
Query: 215 NFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHG 274
V + ++ ++ S SY + H G V V + T + +AG
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECIHSYCE--------HGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 275 DIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEG 333
+KVWD + L +++ + V + +H L T + D +++ D++ R++ G
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 334 HTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
H T FS G++ S G D + +W
Sbjct: 270 HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 112/278 (40%), Gaps = 40/278 (14%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++ L
Sbjct: 61 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSL 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W + R L + H C +F +GR I+SA D+ +L+
Sbjct: 119 VTASDDKTVKVW----STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 172
Query: 122 IQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAY 181
D+ SRE + E + F + C + MD
Sbjct: 173 --DKTSRECIHSYC-----------EHGGFVTYVDFHPSGT-----C-IAAAGMDNT-VK 212
Query: 182 VWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL 241
VW + L +H + AV A + GN+ + ++ ++ +L G R Y
Sbjct: 213 VWDARTHRLLQHYQL----HSAAVNALSFHPSGNYLITASSDSTLKILDLMEG--RLLY- 265
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+ + H G VA T S G + VW
Sbjct: 266 -----TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S +++A +KVW + + V+ +G L+
Sbjct: 101 AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLI 160
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
+ +DD ++L+D + + + H +T F G + ++GMD ++++WD R
Sbjct: 161 VSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHR 220
Query: 369 QIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + ++ ALS P+ + L TA D
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLITASSD 250
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 329 RKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSITALSLSPN 387
R F+GH D +T FS + K L S MD +L IW + +R ++T ++ SP+
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 388 MDVLATAHVDQNGVYLWV 405
+LA+ D+ V +WV
Sbjct: 73 GHLLASGSRDKT-VRIWV 89
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 3/162 (1%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ER H V V + S + +W K + R+ V V
Sbjct: 12 ERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+G LLA+ + D +R++ F HT + F DG+ L+++ D ++++W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWS 131
Query: 364 VILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
R + ++ ++ + SP+ ++ +A D+ V LW
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT-VKLW 172
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 124/328 (37%), Gaps = 53/328 (16%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H +A+ + F N L S S D+ + +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQS---RAYRF-TGHKDAVTCVNFSP 71
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEI 162
+G + S +D+ R++ +K E V A +
Sbjct: 72 SGHLLASGSRDKTVRIWVP---------------------NVKGEST----VFRAHTATV 106
Query: 163 RERDWCN----VVTCHMD-TAQAYVWRLQNFV--LGEHILRPCPENPTAVKACTISACGN 215
R +C+ VT D T + + Q F+ L +HI V+ S G
Sbjct: 107 RSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHI--------NWVRCAKFSPDGR 158
Query: 216 FAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGD 275
V + ++ ++ S SY + H G V V + T + +AG
Sbjct: 159 LIVSASDDKTVKLWDKSSRECVHSYCE--------HGGFVTYVDFHPSGTCIAAAGMDNT 210
Query: 276 IKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGH 334
+KVWD + L +++ + V + +H L T + D +++ D++ R++ GH
Sbjct: 211 VKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Query: 335 TDRITDFCFSEDGKWLLSSGMDGSLRIW 362
T FS G++ S G D + +W
Sbjct: 271 QGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 110/278 (39%), Gaps = 40/278 (14%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ AVT + FS G LLASG+ + IW + + +S + AH + S+HF ++
Sbjct: 61 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
++AS D ++K+W + L S H C +F +GR I+SA D+ +L+
Sbjct: 119 VTASDDKTVKVWATHRQ----KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW-- 172
Query: 122 IQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAY 181
D+ SRE + E + F + C + MD
Sbjct: 173 --DKSSRECVHSYC-----------EHGGFVTYVDFHPSGT-----C-IAAAGMDNT-VK 212
Query: 182 VWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL 241
VW ++ L +H + AV + GN+ + ++ ++ +L G R Y
Sbjct: 213 VWDVRTHRLLQHYQL----HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG--RLLY- 265
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 279
+ + H G VA T S G + VW
Sbjct: 266 -----TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH V V S ++A +KVW + + V+ +G L+
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
+ +DD ++L+D + V + H +T F G + ++GMD ++++WDV R
Sbjct: 161 VSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHR 220
Query: 369 QIDAIHV-DVSITALSLSPNMDVLATAHVD 397
+ + ++ LS P+ + L TA D
Sbjct: 221 LLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 329 RKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSITALSLSPN 387
R F+GH D +T FS + K L S MD L +W + +R ++T ++ SP+
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 388 MDVLATAHVDQNGVYLWV 405
+LA+ D+ V +WV
Sbjct: 73 GHLLASGSRDKT-VRIWV 89
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 135/354 (38%), Gaps = 48/354 (13%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 102
+ H AI S F N + +AS D + +W + R R+ GH ++F
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLW---SLKPHARAYRY-VGHKDVVTSLQFSP 70
Query: 103 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEI 162
G + SA +D+ RL+ + RK K E + PV + D +
Sbjct: 71 QGNLLASASRDKTVRLWVL-----------------DRKGKSSEFKAHTAPVRSVDFSA- 112
Query: 163 RERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTA 222
D +VT D + VW + + L + V+ S G V +
Sbjct: 113 ---DGQFLVTASEDKS-IKVWSMYR----QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 223 GGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK 282
I+ ++ S ++ D +N+ V T + SAG +++WD +
Sbjct: 165 DKTIKIWDTTSKQCVNNFSDSVGFANF--------VDFSPNGTCIASAGSDHAVRIWDIR 216
Query: 283 GRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 341
L ++V C + + +H L T + D +++ D+V R++ +GHT +
Sbjct: 217 MNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTV 276
Query: 342 CFSEDGKWLLSSGMDGSLRIWDVIL---------ARQIDAIHVDVSITALSLSP 386
FS+DG+ S G D + +W R + +H++ S L + P
Sbjct: 277 SFSKDGELFTSGGADAQVLVWRTSFNQVHYRDPSKRNLKRLHLEASPHLLDIYP 330
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH V V + +++A IKVW ++ R L S + V+ +G L
Sbjct: 100 AHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRL 158
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
+ + ++D I+++D + + V F FS +G + S+G D ++RIWD+ +
Sbjct: 159 IVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMN 218
Query: 368 RQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
R + V + LS P+ + L TA D
Sbjct: 219 RLLQHYQVHSCGVNCLSFHPSGNSLVTASSD 249
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
+ A+T+ FS + + + A+ + + +W+L K ++ H + + SL F +L
Sbjct: 18 KAAITSADFSPNCKQI-ATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++W+ D H+AP + F A+G+ +++A +D++ +++S+
Sbjct: 76 ASASRDKTVRLWVLDRKGKSSEF----KAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
Query: 122 IQDQ 125
+ +
Sbjct: 132 YRQR 135
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G + FS +G +AS S + IW++ RL + H + L F + L+
Sbjct: 187 GFANFVDFSPNGT-CIASAGSDHAVRIWDIRMNRLLQHY-QVHSCGVNCLSFHPSGNSLV 244
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+AS+D ++K I D +G RL+ GH+ P + F +G S G D ++
Sbjct: 245 TASSDGTVK--ILDLVEG--RLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTS 300
Query: 123 QDQ-QSRELSQRHVAK 137
+Q R+ S+R++ +
Sbjct: 301 FNQVHYRDPSKRNLKR 316
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISLHFFANEPVLMS 63
V ++ FS+DGQ L + + I +W++ ++R L S+ R H + F + +++S
Sbjct: 105 VRSVDFSADGQ-FLVTASEDKSIKVWSMYRQRFLYSLYRHTH--WVRCAKFSPDGRLIVS 161
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S D +IK+W DTT + + S + F NG I SAG D A R++ +
Sbjct: 162 CSEDKTIKIW--DTTSK--QCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDI 215
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V FS DG+ L+ S + I IW+ ++ + ++ A + F N + SA
Sbjct: 147 VRCAKFSPDGR-LIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANF-VDFSPNGTCIASA 204
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
+D+++++W RLL+ HS C+ F+ +G +++A D ++ +++
Sbjct: 205 GSDHAVRIWDIRMN----RLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVE 259
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ER H + + +A + + +W K R+ +V +
Sbjct: 11 ERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
G LLA+ + D +RL+ + +F+ HT + FS DG++L+++ D S+++W
Sbjct: 71 QGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWS 130
Query: 364 VILARQIDAIH 374
+ R + +++
Sbjct: 131 MYRQRFLYSLY 141
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 249 YAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGL 307
Y H+ + V D++ L+ + G IK+WD + + +++ + + + +H
Sbjct: 56 YGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
A+ + D ++++D+ + ++GHT + F+ DG+W++S G D +++WD+
Sbjct: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAG 175
Query: 368 RQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
+ + + I +L P+ +LAT D+ V W
Sbjct: 176 KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRT-VKFW 212
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
V L F+ DG+ + SG ++ +W+L +L + + +H+ I SL F +E +L +
Sbjct: 145 GVNVLRFTPDGR-WVVSGGEDNIVKVWDLTAGKLLTEFK-SHEGQIQSLDFHPHEFLLAT 202
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
SAD ++K W +T + L+ +A C+ F +G+ +L G + ++FS
Sbjct: 203 GSADRTVKFWDLETFE----LIGSGGPETAGVRCLSFNPDGKTVL-CGLQESLKIFS 254
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
L+A+GA+SG I +W+LE+ ++ + H + IS+ F S S D ++K+W
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTL-TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+ GH+ +RF +GR ++S G+D +++
Sbjct: 132 KKG----CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 267 MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFDVVAL 325
++S G +KVWD L + ++ ++ + +H LLAT + D ++ +D+
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217
Query: 326 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLS 385
++ T + F+ DGK +L G+ SL+I+ R D VDV + LS
Sbjct: 218 ELIGSGGPETAGVRCLSFNPDGKTVL-CGLQESLKIFSWEPIRCHDG--VDVGWSRLS-- 272
Query: 386 PNMDV----LATAHVDQNGVYLWV 405
+M+V L +Q+ V +WV
Sbjct: 273 -DMNVHEGKLLGCSYNQSCVGVWV 295
>sp|Q8I0F4|LIS1_DICDI Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1
SV=1
Length = 419
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 135/350 (38%), Gaps = 57/350 (16%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
L+ S + I +W+ E + ++ H NA+ + F +L S SAD +IK+W F
Sbjct: 120 LMVSASEDATIKVWDFESGEFERTLK-GHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQ 178
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
T D ++ GH C+RF +G ++S+ +D+ +++ + L
Sbjct: 179 TYD----CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHE-- 232
Query: 137 KRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILR 196
RK+ + E D + +C D + N V GE L
Sbjct: 233 DWVRKITVSE-------------------DGSCIASCSNDQTI----KTWNIVKGE-CLA 268
Query: 197 PCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVV 256
E+ V+ S ++ G + +S + +G ++ + Y G
Sbjct: 269 TYREHSHVVECLAFSTAN---IIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSR- 324
Query: 257 GVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL 315
D T IK+W+ GR L + + + +H L +V DD
Sbjct: 325 ----DKT------------IKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDK 368
Query: 316 VIRLFDVVALRMVRKF-EGHTDRIT--DFCFSEDGKWLLSSGMDGSLRIW 362
IR++D+ R ++ E HT I+ DFC + + G+D +++W
Sbjct: 369 TIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPH--IATGGVDDVIKVW 416
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 265 TLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFDVV 323
+LM+SA IKVWDF+ + + + + V+ I + + LLA+ + DL I+L+D
Sbjct: 119 SLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQ 178
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITA 381
V+ GH ++ F+ G L+SS D ++++W+ I + H D +
Sbjct: 179 TYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDW-VRK 237
Query: 382 LSLSPNMDVLATAHVDQN 399
+++S + +A+ DQ
Sbjct: 238 ITVSEDGSCIASCSNDQT 255
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 306 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
G LAT + D I+++++ R + + GH + + F GK+LLS G D ++R+WD+
Sbjct: 317 GYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIA 376
Query: 366 LARQIDAIHVDVS--ITALSLSPNMDVLATAHVD 397
R I I+ + I+ L + +AT VD
Sbjct: 377 QGRCIKTINEAHTHFISCLDFCLHNPHIATGGVD 410
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ER+ H V + D T L+ S IK+WDF+ D V V
Sbjct: 141 ERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTP 200
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+G L + + D I++++ ++ GH D + SEDG + S D +++ W+
Sbjct: 201 SGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Query: 364 VI----LARQIDAIHVDVSITALSLSPNMDV 390
++ LA + HV V A S + +D+
Sbjct: 261 IVKGECLATYREHSHV-VECLAFSTANIIDI 290
Score = 40.0 bits (92), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 123/336 (36%), Gaps = 76/336 (22%)
Query: 41 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD------------------------ 76
I H N I S+ F + +++SAS D +IK+W F+
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 77 ------TTDGDPRLLRFRS--------GHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
+ D +L F++ GH C+RF +G ++S+ +D+ +++
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 123 QDQQSRELSQRHVAKRARKLKMKE-----------EELKLKPVIAFDC-AEIRERDWCNV 170
+ L RK+ + E + +K ++ +C A RE
Sbjct: 221 TGYCIKTLVGHE--DWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYRE------ 272
Query: 171 VTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVK----ACTISACGNFAVLGTAGGWI 226
H + + N + L PE + VK + CG A G+ I
Sbjct: 273 ---HSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLAT-GSRDKTI 328
Query: 227 ERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRD 285
+ + L +G +Y+ H+ V V ++S G I+VWD +GR
Sbjct: 329 KIWELATGRCLATYI--------GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRC 380
Query: 286 LKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLF 320
+K+ E + + + N +AT D VI+++
Sbjct: 381 IKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V A+ F G+ LL+ G I +W++ + R I EAH + I L F + P + +
Sbjct: 349 VRAVRFHPCGKFLLSVGDDK-TIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATG 407
Query: 65 SADNSIKMW 73
D+ IK+W
Sbjct: 408 GVDDVIKVW 416
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLL 308
H V V ++ L+++ G ++VWD + + L++ ++ + +H +
Sbjct: 61 GHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFV 120
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D I+L+DV V +++GHT + FS DGKWL S+ D S+++WD+ +
Sbjct: 121 ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGK 180
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
+ + + + PN +LA+ D+ V W
Sbjct: 181 MMAELSEHKGPVNIIEFHPNEYLLASGSADRT-VRFW 216
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
++ + L+ +G+ SG + +W+LE ++ + H + SL F + S S D +IK
Sbjct: 72 NNAEELIVAGSQSGSLRVWDLEAAKILRTLM-GHKANVCSLDFHPYGDFVASGSLDTNIK 130
Query: 72 MWIFDTTDGDPRLLRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+W D + FR GH+ C+RF +G+ + SA D + +L+ + + EL
Sbjct: 131 LW-----DVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAEL 185
Query: 131 SQ 132
S+
Sbjct: 186 SE 187
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV L FS DG+ LAS + + +W+L ++ + + E H + + F NE +L S
Sbjct: 149 AVRCLRFSPDGK-WLASASDDHSVKLWDLTAGKMMAELSE-HKGPVNIIEFHPNEYLLAS 206
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
SAD +++ W + +L+ G + P I F ++G I G+D A R++
Sbjct: 207 GSADRTVRFWDLEKF----QLIGCTEGETIPVRAILFSSDGGCIFCGGRD-ALRVYGWEP 261
Query: 124 DQ 125
DQ
Sbjct: 262 DQ 263
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 287 KSRWEV------GCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRIT 339
K+ W++ G S+ +V + +G L+AT DD + L+ V + GHT +
Sbjct: 8 KTTWKLQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVE 67
Query: 340 DFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQ 398
F+ + +++ GSLR+WD+ A+ + + ++ +L P D +A+ +D
Sbjct: 68 SVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDT 127
Query: 399 NGVYLWVNR---CMF 410
N + LW R C+F
Sbjct: 128 N-IKLWDVRRKGCVF 141
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN 305
R+ H V + + S +IK+WD + + R++ V+ + +
Sbjct: 99 RTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPD 158
Query: 306 G-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
G LA+ +DD ++L+D+ A +M+ + H + F + L S D ++R WD+
Sbjct: 159 GKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218
Score = 40.0 bits (92), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 249 YAHNGEVVGVAC---DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRV 304
+ + G V C + SA +K+WD + + V I+ +H
Sbjct: 141 FRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPN 200
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
LLA+ + D +R +D+ +++ EG T + FS DG + G D +LR++
Sbjct: 201 EYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGGRD-ALRVY 257
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 262 STNTLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIR 318
S +L ++G H ++W F R R G + + +H + LAT + D +R
Sbjct: 393 SPYSLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 319 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---ILARQIDAIHV 375
L+ VR F GH + FS +GK+L S+G D L++WD+ L +++ H
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HT 510
Query: 376 DVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSS 435
D +IT+L+ SP+ ++A+A +D N V +W R + + + S E+V V +S+
Sbjct: 511 D-NITSLTFSPDSGLIASASMD-NSVRVWDIRNTY---CSAPADGSSSELVGVYTGQMSN 565
Query: 436 VEGCQ 440
V Q
Sbjct: 566 VLSVQ 570
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 18 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 77
ASG+ +W+ + R I H + + F N L + S D ++++W
Sbjct: 399 FASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 78 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+ +R +GH P L + F NG+++ SAG+D+ +L+ + +EL
Sbjct: 458 GNS----VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 506
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
RG V +LAFS +G+ LAS + +W+L L +R H + I SL F + ++
Sbjct: 468 RGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLYKELR-GHTDNITSLTFSPDSGLI 525
Query: 62 MSASADNSIKMWIFDTT------DG-DPRLLRFRSGHSAPPLCIRFYA 102
SAS DNS+++W T DG L+ +G + L ++F A
Sbjct: 526 ASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMA 573
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V + F +D LL S + I W+L +V+ + H + L
Sbjct: 343 GPVYSTRFLADSSGLL-SCSEDMSIRYWDLGSFT-NTVLYQGHAYPVWDLDISPYSLYFA 400
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 122
S S D + ++W FD T LR +GH A C++F+ N ++ + D+ RL+S
Sbjct: 401 SGSHDRTARLWSFDRT----YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Query: 123 QDQQSR 128
Q R
Sbjct: 457 QGNSVR 462
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 254 EVVGVACDSTNTLMISAGYHGD-IKVWDFKGRDLKS--------RWEVGCSLV------- 297
+++ A S ++ +++AG+ IK+W + + LKS R + C ++
Sbjct: 269 QLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDED 328
Query: 298 -------KIVYHRVNGLLAT-----------VADDLVIRLFDVVALRMVRKFEGHTDRIT 339
KI+ + +T ++D+ IR +D+ + ++GH +
Sbjct: 329 DNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVW 388
Query: 340 DFCFSEDGKWLLSSGMDGSLRIW--DVILARQIDAIHVDVSITALSLSPNMDVLATAHVD 397
D S + S D + R+W D +I A H+ + + PN + LAT D
Sbjct: 389 DLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTD 447
Query: 398 QNGVYLW 404
+ V LW
Sbjct: 448 KT-VRLW 453
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLL 308
H V V ++ L+++ G I+VWD + + L++ ++ + +H +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
+ + + PN +LA+ D+ + W
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT-IRFW 216
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 5/183 (2%)
Query: 232 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 349 WLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW-VN 406
L S D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE 262
Query: 407 RCM 409
RC
Sbjct: 263 RCF 265
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+ R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 136 RKGC---VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLHFFANEPV 60
+ + +L F G+ +ASG+ I +W++ RR V R H A+ L F +
Sbjct: 105 KANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L SA+ D+++K+W D T G +++ GH+ P + F+ N + S DR R +
Sbjct: 162 LASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Query: 121 V 121
+
Sbjct: 218 L 218
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV L FS DG+ LAS A + +W+L ++ S H + + F NE +L S
Sbjct: 149 AVRCLRFSPDGK-WLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVNVVEFHPNEYLLAS 206
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S+D +I+ W + +++ G P + F +G + S QD + R++
Sbjct: 207 GSSDRTIRFWDLEKF----QVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V++L LLA+G +++W++ K + H + + S+ E ++++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRLNTPEELIVAG 81
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SI++W + ++LR GH A + F+ G + S QD +L+ +
Sbjct: 82 SQSGSIRVWDLEAA----KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 299 IVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
+V + +G LLAT DD + L+ + + GHT + + + +++ G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 358 SLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLWVNR---CMF 410
S+R+WD+ A+ + + +I +L P + +A+ D N + LW R C+F
Sbjct: 86 SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVF 141
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLL 308
H V V ++ L+++ G I+VWD + + L++ ++ + +H +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
+ + + PN +LA+ D+ + W
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT-IRFW 216
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 5/183 (2%)
Query: 232 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 289
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 290 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 348
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 349 WLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW-VN 406
L S D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE 262
Query: 407 RCM 409
RC
Sbjct: 263 RCF 265
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
L+ +G+ SG I +W+LE ++ + H I SL F + S S D +IK+W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+ R+R GHS C+RF +G+ + SA D +L+ + + E
Sbjct: 136 RKGC---VFRYR-GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLHFFANEPV 60
+ + +L F G+ +ASG+ I +W++ RR V R H A+ L F +
Sbjct: 105 KANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 120
L SA+ D+++K+W D T G +++ GH+ P + F+ N + S DR R +
Sbjct: 162 LASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Query: 121 V 121
+
Sbjct: 218 L 218
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV L FS DG+ LAS A + +W+L ++ S H + + F NE +L S
Sbjct: 149 AVRCLRFSPDGK-WLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVNVVEFHPNEYLLAS 206
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
S+D +I+ W + +++ G P + F +G + S QD + R++
Sbjct: 207 GSSDRTIRFWDLEKF----QVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V++L LLA+G +++W++ K + H + + S+ E ++++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRLNTPEELIVAG 81
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
S SI++W + ++LR GH A + F+ G + S QD +L+ +
Sbjct: 82 SQSGSIRVWDLEAA----KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 299 IVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 357
+V + +G LLAT DD + L+ + + GHT + + + +++ G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 358 SLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLWVNR---CMF 410
S+R+WD+ A+ + + +I +L P + +A+ D N + LW R C+F
Sbjct: 86 SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVF 141
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 41/322 (12%)
Query: 43 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFR-SGHSAPPLCIRFY 101
+ H + + ++ F N L S S D+ + +W + P++ +R GH L + F
Sbjct: 15 KGHRDTVTTVDFNPNTKQLASGSMDSCLMIW-----NMKPQMRAYRFVGHKDAILSVDFS 69
Query: 102 ANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAE 161
+G I SA +D+ RL+ +S R+ + L V A D
Sbjct: 70 PSGHLIASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSL----VTASDDKT 125
Query: 162 IRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGT 221
I+ V T H Q ++ F L +HI V+ S G V +
Sbjct: 126 IK------VWTVHR---QKFL-----FSLNQHI--------NWVRCAKFSPDGRLIVSAS 163
Query: 222 AGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 281
I+ ++ S S+ + H G V V + T + +A +KVWD
Sbjct: 164 DDKTIKLWDKTSRECIHSFCE--------HGGFVNFVDFHPSGTCIAAAATDNTVKVWDI 215
Query: 282 KGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 340
+ L ++V +V + +H L T ++D +++ D++ R++ GH +T
Sbjct: 216 RMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTS 275
Query: 341 FCFSEDGKWLLSSGMDGSLRIW 362
FS +G++ S G D + +W
Sbjct: 276 VKFSREGEFFASGGSDEQVMVW 297
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT + F+ + + L ASG+ + IWN+ K ++++ H +AI+S+ F + ++
Sbjct: 18 RDTVTTVDFNPNTKQL-ASGSMDSCLMIWNM-KPQMRAYRFVGHKDAILSVDFSPSGHLI 75
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
SAS D ++++W+ + G+ + + H+ + F +G+ +++A D+ ++++V
Sbjct: 76 ASASRDKTVRLWV-PSVKGESTVFK---AHTGTVRSVSFSGDGQSLVTASDDKTIKVWTV 131
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 308
AH G V V+ +++A IKVW + + V+ +G L+
Sbjct: 100 AHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLI 159
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
+ +DD I+L+D + + F H + F G + ++ D ++++WD+ + +
Sbjct: 160 VSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNK 219
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVD 397
I V + +LS P+ + L TA D
Sbjct: 220 LIQHYQVHSGVVNSLSFHPSGNYLITASND 249
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR--EAHDNAIISLHFFANEPV 60
G V + F G +A+ A+ + +W++ R+ +I+ + H + SL F +
Sbjct: 187 GFVNFVDFHPSGT-CIAAAATDNTVKVWDI---RMNKLIQHYQVHSGVVNSLSFHPSGNY 242
Query: 61 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 113
L++AS D+++K + D +G RLL GH P ++F G S G D
Sbjct: 243 LITASNDSTLK--VLDLLEG--RLLYTLHGHQGPVTSVKFSREGEFFASGGSD 291
Score = 40.4 bits (93), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 329 RKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI----HVDVSITALSL 384
R F+GH D +T F+ + K L S MD L IW+ + Q+ A H D +I ++
Sbjct: 12 RHFKGHRDTVTTVDFNPNTKQLASGSMDSCLMIWN--MKPQMRAYRFVGHKD-AILSVDF 68
Query: 385 SPNMDVLATAHVDQNGVYLWV 405
SP+ ++A+A D+ V LWV
Sbjct: 69 SPSGHLIASASRDKT-VRLWV 88
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G V +++FS DGQ L+ + + I +W + +++ + + H N + F + +++
Sbjct: 103 GTVRSVSFSGDGQSLV-TASDDKTIKVWTVHRQKFLFSLNQ-HINWVRCAKFSPDGRLIV 160
Query: 63 SASADNSIKMW 73
SAS D +IK+W
Sbjct: 161 SASDDKTIKLW 171
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-L 308
H ++ V + L+ SA +++W + + ++ V+ V +G L
Sbjct: 58 GHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSL 117
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
T +DD I+++ V + + H + + FS DG+ ++S+ D ++++WD
Sbjct: 118 VTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWD 172
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLL 308
H V V +++ L+++ G +++WD + + L++ ++ + +H +
Sbjct: 61 GHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFV 120
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D I+L+DV V +++GHT + FS DGKWL S+ D S+++WD+ +
Sbjct: 121 ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGK 180
Query: 369 QIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 404
+ + + + PN +LA+ D+ V W
Sbjct: 181 MMAELSEHKGPVNIIEFHPNEYLLASGSADRT-VRFW 216
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 287 KSRWEV------GCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRIT 339
K+ W++ GCS+ +V R +G L+AT DD + L+ V + GHT +
Sbjct: 8 KTTWKLQEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVE 67
Query: 340 DFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQ 398
F+ + +++ GSLRIWD+ A+ + + ++++L P + +A+ +D
Sbjct: 68 SVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDT 127
Query: 399 NGVYLWVNR---CMF 410
N + LW R C+F
Sbjct: 128 N-IKLWDVRRKGCVF 141
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
++ + L+ +G+ SG + IW+LE ++ + H + SL F + S S D +IK
Sbjct: 72 NNSEELIVAGSQSGSLRIWDLEAAKILRTLM-GHKANVSSLDFHPYGEFVASGSLDTNIK 130
Query: 72 MWIFDTTDGDPRLLRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 130
+W D + FR GH+ C+RF +G+ + SA D + +L+ + + EL
Sbjct: 131 LW-----DVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAEL 185
Query: 131 SQ 132
S+
Sbjct: 186 SE 187
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV L FS DG+ LAS + + +W+L ++ + + E H + + F NE +L S
Sbjct: 149 AVRCLRFSPDGK-WLASASDDHSVKLWDLTAGKMMAELSE-HKGPVNIIEFHPNEYLLAS 206
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
SAD +++ W + +L+ G + P I F +G I G+D + R++
Sbjct: 207 GSADRTVRFWDLEKF----QLVGCTEGETIPVRAILFSNDGGCIFCGGKD-SLRVYGWEP 261
Query: 124 DQ 125
DQ
Sbjct: 262 DQ 263
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN 305
R+ H V + + S +IK+WD + + R++ V+ + +
Sbjct: 99 RTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPD 158
Query: 306 G-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
G LA+ +DD ++L+D+ A +M+ + H + F + L S D ++R WD+
Sbjct: 159 GKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 249 YAHNGEVVGVAC---DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRV 304
+ + G V C + SA +K+WD + + V I+ +H
Sbjct: 141 FRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPN 200
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
LLA+ + D +R +D+ ++V EG T + FS DG + G D SLR++
Sbjct: 201 EYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKD-SLRVY 257
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN 305
R H G + V + +AG +K+WD G L++ S+ + +
Sbjct: 595 REFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQTLKGHQDSVYSVSFSPDG 654
Query: 306 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV- 364
+LA+ + D +RL+ + + + GHT + D FS DG+ L+S DG +R+WD+
Sbjct: 655 EILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLD 714
Query: 365 -ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWV 405
L RQ +V+ ++ PN ++LA A D V LW
Sbjct: 715 GNLIRQFGL--PEVAFFGVNWHPNGNLLAVA-ADDGTVRLWT 753
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 153/379 (40%), Gaps = 56/379 (14%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKR------RLQSVIREAHDNAIISLHFFA- 56
A+ LA +S+G LLA GA + ++ +W++ + L +V+ +NA + A
Sbjct: 809 AIFGLALASNG-ALLAIGAENNLVKVWDMSPKSDLVNLNLPAVLGAVAENAKTNTIALAM 867
Query: 57 -NEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRA 115
NEP+++ F+T + R +F S S ++F A+G+ +L + R
Sbjct: 868 ENEPLIL------------FNTKN---RSRQFLSDASQNLDRLKFSADGQWLLGQ-RGRQ 911
Query: 116 FRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHM 175
++L+ +Q + + R R + ++ + IA + W
Sbjct: 912 WQLWQ-LQTKSQLLKTWRTDISRVYDVDLRTTPTSPQWAIAMATGSGEVQLWQGTKNNQT 970
Query: 176 DTAQA----------YVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGW 225
Q+ V L N + + +R +PT + GN + G
Sbjct: 971 SGNQSQGVPIELNDPIVLALGNSIQRKEPIRSVSLHPTLPQLAAGDEQGNLTLWNFDGTL 1030
Query: 226 IERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD 285
I +S ++ G L+ + Y+ NG+ ++SAG G K+W +G+
Sbjct: 1031 I-----RSIVAHGDRLNQLQ---YSPNGKY-----------LLSAGREGTAKIWSVEGQL 1071
Query: 286 LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSE 345
L + + +I + +AT A D ++RL+D + +F + + F+
Sbjct: 1072 LHTLKSDPLPIDQIAISPDSQWIATAASDGMVRLWDQQG-NLRGEFTSTSGSLLGLDFNR 1130
Query: 346 DGKWLLSSGMDGSLRIWDV 364
G+WLL+ +G L+ W V
Sbjct: 1131 QGQWLLAVAQNGDLQSWPV 1149
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 61
R VT++A SS + L+AS + G + +W + L+ H +I + F N +
Sbjct: 560 RDGVTSVAISSH-KNLIASASRDGTVHLWTPQGEFLREFT--GHTGSIYRVDFSPNGKIF 616
Query: 62 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
+A D ++K+W D D LL+ GH + F +G + S +DR RL+
Sbjct: 617 ATAGQDQTVKIW-----DLDGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLW 669
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 267 MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALR 326
++S G I++WD G ++ + + +H LLA ADD +RL+
Sbjct: 699 LVSVCRDGQIRLWDLDGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWTPQG-E 757
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSP 386
+ GH + +T F+ DGK L SS +GS+ W +I L+L+
Sbjct: 758 IKATLSGHDEFVTRVVFTPDGKQLFSSSSNGSVIHWSTSGKMLKKYQGYPEAIFGLALAS 817
Query: 387 NMDVLATAHVDQNGVYLW 404
N +LA + N V +W
Sbjct: 818 NGALLAIG-AENNLVKVW 834
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 293 GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLS 352
G + V I H+ L+A+ + D + L+ +R+F GHT I FS +GK +
Sbjct: 562 GVTSVAISSHK--NLIASASRDGTVHLWTPQG-EFLREFTGHTGSIYRVDFSPNGKIFAT 618
Query: 353 SGMDGSLRIWDV--ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 404
+G D +++IWD+ L + + H D S+ ++S SP+ ++LA+ D+ V LW
Sbjct: 619 AGQDQTVKIWDLDGNLLQTLKG-HQD-SVYSVSFSPDGEILASTSRDRT-VRLW 669
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/382 (18%), Positives = 157/382 (41%), Gaps = 60/382 (15%)
Query: 22 ASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGD 81
A+S ++S+ + + + + H + + S+ +++ ++ SAS D ++ +W T G+
Sbjct: 536 ATSPLVSLQQILSQIAEKNVLTGHRDGVTSVAISSHKNLIASASRDGTVHLW---TPQGE 592
Query: 82 PRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARK 141
LR +GH+ + F NG+ +AGQD+ +++ + ++ + +
Sbjct: 593 --FLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDL----------DGNLLQTLKG 640
Query: 142 LKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNF--VLGEHI----- 194
+ + P + R+R T + + WR VLG H
Sbjct: 641 HQDSVYSVSFSPDGEILASTSRDR-----------TVRLWHWRSGKTLAVLGGHTKSVDD 689
Query: 195 LRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGE 254
+ P+ T V C G + G I +F G+ ++ + N+ NG
Sbjct: 690 AQFSPDGQTLVSVCR---DGQIRLWDLDGNLIRQF----GLPEVAFFGV----NWHPNGN 738
Query: 255 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG--LLATVA 312
++ VA D G +++W +G ++K+ V V +G L ++ +
Sbjct: 739 LLAVAADD-----------GTVRLWTPQG-EIKATLSGHDEFVTRVVFTPDGKQLFSSSS 786
Query: 313 DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDA 372
+ VI + +M++K++G+ + I + +G L + +++WD+ +
Sbjct: 787 NGSVIHW--STSGKMLKKYQGYPEAIFGLALASNGALLAIGAENNLVKVWDMSPKSDLVN 844
Query: 373 IHVDVSITALSLSPNMDVLATA 394
+++ + A++ + + +A A
Sbjct: 845 LNLPAVLGAVAENAKTNTIALA 866
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 327 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD-VSITALSLS 385
++R H DR+ +S +GK+LLS+G +G+ +IW V + + + D + I +++S
Sbjct: 1030 LIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSV-EGQLLHTLKSDPLPIDQIAIS 1088
Query: 386 PNMDVLATAHVDQNGVYLWVNRCMFSGD 413
P+ +ATA D V LW + G+
Sbjct: 1089 PDSQWIATAASD-GMVRLWDQQGNLRGE 1115
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 32/257 (12%)
Query: 196 RPCPENPTAVKACTISACGNFAVLGTA-----GGWI-----ERFNLQSGISRGSYLDMSE 245
+ PENP CT+ G+ + + G W+ +R + G G Y E
Sbjct: 23 KEVPENPNYALKCTL--VGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKY----E 76
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRV 304
R+ Y HN E+ VA S ++ ++SA +K+WD + G+ LK+ + ++
Sbjct: 77 RTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPP 136
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ L+ + + D +++++V + ++ H+D ++ F+ G ++S DG RIWD
Sbjct: 137 SNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDA 196
Query: 365 ILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLW---VNRCM--FSGDSNID 417
+ + + D + ++ + SPN + TA +D N + LW RC+ ++G N
Sbjct: 197 ASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLD-NTLKLWDYSRGRCLKTYTGHKNEK 255
Query: 418 -------SYASGKEIVS 427
S GK IVS
Sbjct: 256 YCIFANFSVTGGKWIVS 272
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH+ V V + + +L++S Y G ++WD G+ LK+ + V V NG
Sbjct: 165 AHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKY 224
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSED-----GKWLLSSGMDGSLRIW 362
+ T D ++L+D R ++ + GH + +C + GKW++S D + IW
Sbjct: 225 ILTATLDNTLKLWDYSRGRCLKTYTGHKNE--KYCIFANFSVTGGKWIVSGSEDNLVYIW 282
Query: 363 DVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQN-GVYLWVNR 407
++ + + H DV I+A + P +++A+A ++ + + LW++
Sbjct: 283 NLQTKEIVQKLQGHTDVVISA-ACHPTENLIASAALENDKTIKLWMSN 329
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 16/134 (11%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V+A+ F+ G L+ SG+ G+ IW+ + + + + + + F N +++A
Sbjct: 170 VSAVHFNCSGS-LIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTA 228
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSAGQDRAFRLF 119
+ DN++K+W D + G R L+ +GH CI +AN G+ I+S +D ++
Sbjct: 229 TLDNTLKLW--DYSRG--RCLKTYTGHKNEKYCI--FANFSVTGGKWIVSGSEDNLVYIW 282
Query: 120 SVIQDQQSRELSQR 133
++ Q++E+ Q+
Sbjct: 283 NL----QTKEIVQK 292
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD L+ S + + +W++ + ++ H N + +F +++S
Sbjct: 86 ISDVAWSSDSSRLV-SASDDKTLKLWDMRSGKCLKTLK-GHSNYVFCCNFNPPSNLIISG 143
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D ++K+W T + L+ S HS P + F +G I+S D R++
Sbjct: 144 SFDETVKIWEVKT----GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASG 199
Query: 125 QQSREL 130
Q + L
Sbjct: 200 QCLKTL 205
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + + H+ I + + ++ L+S
Sbjct: 43 AVSSVKFSPNGE-WLASSSADRLIIIWGAYDGKYERTLY-GHNLEISDVAWSSDSSRLVS 100
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D ++K+W D G + L+ GHS C F I+S D +++ V
Sbjct: 101 ASDDKTLKLW--DMRSG--KCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKT 156
Query: 124 DQQSRELS 131
+ + LS
Sbjct: 157 GKCLKTLS 164
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
L+ SG+ + IW ++ + + AH + + ++HF + +++S S D ++W D
Sbjct: 139 LIISGSFDETVKIWEVKTGKCLKTL-SAHSDPVSAVHFNCSGSLIVSGSYDGLCRIW--D 195
Query: 77 TTDGDPRLLRFRSGHSAPPLC-IRFYANGRHILSAGQDRAFRLF 119
G + L+ PP+ ++F NG++IL+A D +L+
Sbjct: 196 AASG--QCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLW 237
>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1
Length = 505
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK----GRDLK--SRWEVGCSLVKIVYHR 303
AH G V G++ +T ++S+ D + W F GR L + GC+L +H
Sbjct: 305 AHEGSVTGLSLHATGDYLLSSS---DDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHP 361
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ T D I+++D+ V F GH+ IT FSE+G +L ++ D S+++WD
Sbjct: 362 DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 421
Query: 364 VILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYL 403
+ + + +D + SL DQ+G YL
Sbjct: 422 LRKLKNFKTLQLDNNFEVKSLI----------FDQSGTYL 451
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +T++AFS +G LA+ A + +W+L K + ++ ++ + SL F + L
Sbjct: 394 GPITSIAFSENGY-YLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLA 452
Query: 63 SASADNSI---KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
D I K W +L F + HS + F + + I S G DR+ + +
Sbjct: 453 LGGTDVQIYICKQWT--------EILHF-TEHSGLTTGVAFGHHAKFIASTGMDRSLKFY 503
Query: 120 SV 121
S+
Sbjct: 504 SL 505
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 2 RGAVTALAFSSDGQPLLASGASSGVISIWNLEK----RRLQSVIREAHDNAIISLHFFAN 57
G+VT L+ + G LL+S W R L V E+ A+ F +
Sbjct: 307 EGSVTGLSLHATGDYLLSSSDDQ----YWAFSDIQTGRVLTKVTDESSGCALTCAQFHPD 362
Query: 58 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 117
+ + + D+ IK+W + F GHS P I F NG ++ +A D + +
Sbjct: 363 GLIFGTGTMDSQIKIWDLKERT---NVANF-PGHSGPITSIAFSENGYYLATAADDSSVK 418
Query: 118 LF 119
L+
Sbjct: 419 LW 420
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 16/179 (8%)
Query: 251 HNGEVVGVA----CDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRV 304
H+ + G+ C S +++ G ++ V+D + + + G S + +V+H
Sbjct: 218 HSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLK-GHSKKVTSVVFHPS 276
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
L+ + + D IR++ V V+ H +T G +LLSS D D+
Sbjct: 277 QDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDI 336
Query: 365 ILARQIDAIHVDVSITALSLS---PNMDVLATAHVDQNGVYLW-----VNRCMFSGDSN 415
R + + + S AL+ + P+ + T +D + +W N F G S
Sbjct: 337 QTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQ-IKIWDLKERTNVANFPGHSG 394
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
SD +L GA VI +++ ++ + ++ H + S+ F ++ ++ SAS D +I+
Sbjct: 233 SDTNKILTGGADKNVI-VFDKSSEQILATLK-GHSKKVTSVVFHPSQDLVFSASPDATIR 290
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
+W + ++ H + +A G ++LS+ D+ + FS IQ
Sbjct: 291 IWSVP----NASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQ-YWAFSDIQ 337
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 32/257 (12%)
Query: 196 RPCPENPTAVKACTISACGNFAVLGTA-----GGWI-----ERFNLQSGISRGSYLDMSE 245
+ PENP CT+ G+ + + G W+ +R + G G Y E
Sbjct: 23 KEVPENPNYALKCTL--VGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKY----E 76
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRV 304
++ Y HN E+ VA S ++ ++SA +K+WD + G+ LK+ + ++
Sbjct: 77 KTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPP 136
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ L+ + + D +++++V + ++ H+D ++ F+ G ++S DG RIWD
Sbjct: 137 SNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDA 196
Query: 365 ILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLW---VNRCM--FSGDSNID 417
+ + + D + ++ + SPN + TA +D N + LW RC+ ++G N
Sbjct: 197 ASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLD-NTLKLWDYSRGRCLKTYTGHKNEK 255
Query: 418 -------SYASGKEIVS 427
S GK IVS
Sbjct: 256 YCIFANFSVTGGKWIVS 272
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH+ V V + + +L++S Y G ++WD G+ LK+ + V V NG
Sbjct: 165 AHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKY 224
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSED-----GKWLLSSGMDGSLRIW 362
+ T D ++L+D R ++ + GH + +C + GKW++S D + IW
Sbjct: 225 ILTATLDNTLKLWDYSRGRCLKTYTGHKNE--KYCIFANFSVTGGKWIVSGSEDNLVYIW 282
Query: 363 DVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQN-GVYLWVNR 407
++ + + H DV I+A + P +++A+A ++ + + LW++
Sbjct: 283 NLQTKEIVQKLQGHTDVVISA-ACHPTENLIASAALENDKTIKLWMSN 329
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 16/134 (11%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V+A+ F+ G L+ SG+ G+ IW+ + + + + + + F N +++A
Sbjct: 170 VSAVHFNCSGS-LIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTA 228
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSAGQDRAFRLF 119
+ DN++K+W D + G R L+ +GH CI +AN G+ I+S +D ++
Sbjct: 229 TLDNTLKLW--DYSRG--RCLKTYTGHKNEKYCI--FANFSVTGGKWIVSGSEDNLVYIW 282
Query: 120 SVIQDQQSRELSQR 133
++ Q++E+ Q+
Sbjct: 283 NL----QTKEIVQK 292
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
++ +A+SSD L+ S + + +W++ + ++ H N + +F +++S
Sbjct: 86 ISDVAWSSDSSRLV-SASDDKTLKLWDVRSGKCLKTLK-GHSNYVFCCNFNPPSNLIISG 143
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
S D ++K+W T + L+ S HS P + F +G I+S D R++
Sbjct: 144 SFDETVKIWEVKT----GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASG 199
Query: 125 QQSREL 130
Q + L
Sbjct: 200 QCLKTL 205
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV+++ FS +G+ LAS ++ +I IW + + + H+ I + + ++ L+S
Sbjct: 43 AVSSVKFSPNGE-WLASSSADRLIIIWGAYDGKYEKTLY-GHNLEISDVAWSSDSSRLVS 100
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D ++K+W D G + L+ GHS C F I+S D +++ V
Sbjct: 101 ASDDKTLKLW--DVRSG--KCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKT 156
Query: 124 DQQSRELS 131
+ + LS
Sbjct: 157 GKCLKTLS 164
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
L+ SG+ + IW ++ + + AH + + ++HF + +++S S D ++W D
Sbjct: 139 LIISGSFDETVKIWEVKTGKCLKTL-SAHSDPVSAVHFNCSGSLIVSGSYDGLCRIW--D 195
Query: 77 TTDGDPRLLRFRSGHSAPPLC-IRFYANGRHILSAGQDRAFRLF 119
G + L+ PP+ ++F NG++IL+A D +L+
Sbjct: 196 AASG--QCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLW 237
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 246 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRV 304
R+ H V + + ++L+ SAG+ ++VWDFK G +K + I Y+
Sbjct: 291 RTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHD 350
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDR--ITDFCFSEDGKWLLSSGMDGSLRIW 362
+AT + D IR++D + ++ TD +T CFS +GK+LLS+ +D SL++W
Sbjct: 351 GNTMATSSYDGCIRVWDAASGSCLKTLV-DTDHAPVTFVCFSPNGKYLLSAQLDSSLKLW 409
Query: 363 DVILARQI 370
D A+ +
Sbjct: 410 DPKKAKPL 417
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 204 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYA-HNGEVVGVACDS 262
+V S CG + G+A I+ +N +DM+ A H + + S
Sbjct: 215 SVSVIKFSYCGKYLGTGSADKQIKVWNT---------VDMTYLQTLASHQLGINDFSWSS 265
Query: 263 TNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 321
+ + SA +K++D G L++ + ++ + L+A+ D +R++D
Sbjct: 266 NSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWD 325
Query: 322 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI----LARQIDAIHVDV 377
V+ H+D IT ++ DG + +S DG +R+WD L +D H V
Sbjct: 326 FKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPV 385
Query: 378 SITALSLSPNMDVLATAHVDQNGVYLW 404
T + SPN L +A +D + + LW
Sbjct: 386 --TFVCFSPNGKYLLSAQLDSS-LKLW 409
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-L 307
AH+ + ++ + M ++ Y G I+VWD G LK+ + + V V NG
Sbjct: 337 AHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKY 396
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSED-----GKWLLSSGMDGSLRIW 362
L + D ++L+D + ++ + GH ++ +C + GK ++S DG + +W
Sbjct: 397 LLSAQLDSSLKLWDPKKAKPLKYYNGHKNK--KYCLFANMSVPLGKHIISGSEDGRILVW 454
Query: 363 DVILARQIDAI---HVDVSITALSLSPNMDVLATAHVDQNGV 401
I +QI I H + A P ++++A+ ++ + V
Sbjct: 455 S-IQTKQIVQILEGHT-TPVLATDSHPTLNIIASGGLEPDNV 494
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
+T+++++ DG +A+ + G I +W+ + + + + F N L+SA
Sbjct: 342 ITSISYNHDGN-TMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSA 400
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSAGQDRAFRLF 119
D+S+K+W D P L++ +GH C+ +AN G+HI+S +D ++
Sbjct: 401 QLDSSLKLW--DPKKAKP--LKYYNGHKNKKYCL--FANMSVPLGKHIISGSEDGRILVW 454
Query: 120 SVIQDQQSRELSQRHV 135
S IQ +Q ++ + H
Sbjct: 455 S-IQTKQIVQILEGHT 469
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWN-LEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
+V+ + FS G+ L +G++ I +WN ++ LQ++ +H I + +N +
Sbjct: 215 SVSVIKFSYCGK-YLGTGSADKQIKVWNTVDMTYLQTL--ASHQLGINDFSWSSNSQFIA 271
Query: 63 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
SAS D ++K IFD G LR GH+ C F I SAG D R++
Sbjct: 272 SASDDTTVK--IFDVISG--ACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVW 324
Score = 36.6 bits (83), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
L+AS + +W+ + I AH + I S+ + + + ++S D I++W D
Sbjct: 311 LIASAGFDETVRVWDFKTGLCVKCI-PAHSDPITSISYNHDGNTMATSSYDGCIRVW--D 367
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
G + H AP + F NG+++LSA D + +L+
Sbjct: 368 AASGSCLKTLVDTDH-APVTFVCFSPNGKYLLSAQLDSSLKLW 409
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ + ++D I+++D R +GHTD + D F + GK L S
Sbjct: 109 ITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSA 168
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++ PN D L +A D+ + +W
Sbjct: 169 DMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKT-IKMW 217
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 127/316 (40%), Gaps = 42/316 (13%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
++ S + I IW+ E + ++ H +A+ + F +L S SAD +IK+W F
Sbjct: 120 VMVSASEDATIKIWDYETGDFERTLK-GHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQ 178
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 136
T + ++ GH + F NG ++SA +D+ +++ + + +
Sbjct: 179 TFEN----IKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREW 234
Query: 137 KRARKLKM---------KEEELKLKPVIAFDC-AEIRERDWCNVVTCHMDTAQAYVWRLQ 186
R ++ ++ +++ V +C AE+RE + +VV C ++ +
Sbjct: 235 VRTVRVNQDGSLLASCSNDQTVRVWVVANKECKAELREHE--HVVECIAWAPESCNGHVS 292
Query: 187 NFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSER 246
+ E R P F + G+ I+ +++ +G+ + +
Sbjct: 293 EVMGAEKKGRSGP----------------FLLSGSRDKTIKMWDISTGVCIMTLV----- 331
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSL-VKIVYHRVN 305
H+ V GV +ISA I+VWD+K + + E I +HR
Sbjct: 332 ---GHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQKTLEAHQHFCTSIDFHRSA 388
Query: 306 GLLATVADDLVIRLFD 321
+ T + D +++++
Sbjct: 389 PYVITGSVDQTVKVWE 404
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLL 308
H + V ++M+SA IK+WD++ D + + V+ + + + LL
Sbjct: 104 GHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLL 163
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D+ I+L+D ++ GH ++ F +G +L+S+ D ++++W++
Sbjct: 164 ASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGY 223
Query: 369 QIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWV 405
+ H + + + ++ + +LA+ DQ V +WV
Sbjct: 224 CVKTFTGHREW-VRTVRVNQDGSLLASCSNDQT-VRVWV 260
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV ++F G+ LLAS ++ I +W+ + + HD+ + S+HF N L+S
Sbjct: 150 AVQDVSFDQQGK-LLASCSADMTIKLWDFQTFENIKTMH-GHDHNVSSVHFMPNGDFLIS 207
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T ++ +GH +R +G + S D+ R++ V
Sbjct: 208 ASRDKTIKMWELATG----YCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVAN 263
Query: 124 DQQSRELSQ 132
+ EL +
Sbjct: 264 KECKAELRE 272
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ER+ H V V+ D L+ S IK+WDF+ + V V+
Sbjct: 141 ERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMP 200
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
NG L + + D I+++++ V+ F GH + + ++DG L S D ++R+W
Sbjct: 201 NGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWV 260
Query: 364 V 364
V
Sbjct: 261 V 261
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 124/341 (36%), Gaps = 61/341 (17%)
Query: 44 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 103
H + I + F V++SAS D +IK+W ++T D R GH+ + F
Sbjct: 104 GHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGD----FERTLKGHTDAVQDVSFDQQ 159
Query: 104 GRHILSAGQDRA-----FRLFSVIQDQQSRE--LSQRHVAKRARKL--KMKEEELKLKPV 154
G+ + S D F+ F I+ + +S H L +++ +K+ +
Sbjct: 160 GKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWEL 219
Query: 155 IAFDCAEI--RERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISA 212
C + R+W V + D + +L C + T V+ ++
Sbjct: 220 ATGYCVKTFTGHREWVRTVRVNQDGS---------------LLASCSNDQT-VRVWVVAN 263
Query: 213 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDS-TNTLMISAG 271
A L +E + + S H EV+G + ++S
Sbjct: 264 KECKAELREHEHVVE------------CIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGS 311
Query: 272 YHGDIKVWDFK---------GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 322
IK+WD G D W G +V+H + + +DD IR++D
Sbjct: 312 RDKTIKMWDISTGVCIMTLVGHD---NWVRG-----VVWHPGGKYIISASDDKTIRVWDY 363
Query: 323 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
R + E H T F ++++ +D ++++W+
Sbjct: 364 KNKRCQKTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKVWE 404
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
G + S + I +W+ + +R Q + EAH + S+ F + P +++ S D ++K+W
Sbjct: 345 GGKYIISASDDKTIRVWDYKNKRCQKTL-EAHQHFCTSIDFHRSAPYVITGSVDQTVKVW 403
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ K+++H V ++ T ++D ++++D R +GHTD + D F GK+L SS
Sbjct: 109 ITKVLFHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHTGKFLASSSA 168
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++S P+ D L +A D+ + +W
Sbjct: 169 DMTIKLWDFQGFECIRTLHGHDHNVSSISFLPSGDHLVSASRDKT-IKMW 217
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLL 308
H + V ++M+++ +KVWD++ D + + V+ + + L
Sbjct: 104 GHRSPITKVLFHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHTGKFL 163
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
A+ + D+ I+L+D +R GH ++ F G L+S+ D ++++W++
Sbjct: 164 ASSSADMTIKLWDFQGFECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEI 219
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
++ + + + +W+ E + ++ H +A+ L F L S+SAD +IK+W F
Sbjct: 120 VMVTSSEDATVKVWDYETGDFERTLK-GHTDAVQDLAFDHTGKFLASSSADMTIKLWDFQ 178
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
+ +R GH I F +G H++SA +D+ +++ +
Sbjct: 179 GFE----CIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEI 219
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
AV LAF G+ LAS ++ I +W+ + + HD+ + S+ F + L+S
Sbjct: 150 AVQDLAFDHTGK-FLASSSADMTIKLWDFQGFECIRTLH-GHDHNVSSISFLPSGDHLVS 207
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 121
AS D +IKMW T ++ GH +R A+G I S D+ R++ V
Sbjct: 208 ASRDKTIKMWEIATG----YCVKTFQGHGEWVRRVRPNADGSLIASCSNDQTIRVWVV 261
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHR 303
ER+ H V +A D T + S+ IK+WDF+G + +++ ++ I +
Sbjct: 141 ERTLKGHTDAVQDLAFDHTGKFLASSSADMTIKLWDFQGFECIRTLHGHDHNVSSISFLP 200
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
L + + D I+++++ V+ F+GH + + + DG + S D ++R+W
Sbjct: 201 SGDHLVSASRDKTIKMWEIATGYCVKTFQGHGEWVRRVRPNADGSLIASCSNDQTIRVW- 259
Query: 364 VILARQ 369
V+ +R+
Sbjct: 260 VVASRE 265
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 27/141 (19%)
Query: 11 SSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF-------FANE----- 58
++DG L+AS ++ I +W + R + +R+ HD+ I L++ NE
Sbjct: 241 NADGS-LIASCSNDQTIRVWVVASRECKCDLRD-HDHVIEDLNWAPESATPVINEAAGVE 298
Query: 59 ---------PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILS 109
P L+SAS D SIK+W D + G L GH + F+ G+ I+S
Sbjct: 299 GGKKAMSPGPFLVSASRDKSIKIW--DVSAG--VCLVTLVGHDNWVRAVMFHPGGKFIVS 354
Query: 110 AGQDRAFRLFSVIQDQQSREL 130
D+ R++ + ++ L
Sbjct: 355 CSDDKTLRIWDYKNKRCAKTL 375
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 19/112 (16%)
Query: 262 STNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV----------YHRVNGLLATV 311
S ++SA IK+WD G LV +V +H + +
Sbjct: 305 SPGPFLVSASRDKSIKIWDVSA---------GVCLVTLVGHDNWVRAVMFHPGGKFIVSC 355
Query: 312 ADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+DD +R++D R + H +T F + ++ + +D +L++W+
Sbjct: 356 SDDKTLRIWDYKNKRCAKTLVAHEHFVTTLDFHKSAPFVATGSVDLTLKVWE 407
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
L + + D I+++DV A + GH + + F GK+++S D +LRIWD
Sbjct: 309 FLVSASRDKSIKIWDVSAGVCLVTLVGHDNWVRAVMFHPGGKFIVSCSDDKTLRIWDYKN 368
Query: 367 ARQIDAIHV-DVSITALSLSPNMDVLATAHVD 397
R + + +T L + +AT VD
Sbjct: 369 KRCAKTLVAHEHFVTTLDFHKSAPFVATGSVD 400
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
V A+ F G+ + S + + IW+ + +R + AH++ + +L F + P + +
Sbjct: 340 VRAVMFHPGGK-FIVSCSDDKTLRIWDYKNKRCAKTLV-AHEHFVTTLDFHKSAPFVATG 397
Query: 65 SADNSIKMW 73
S D ++K+W
Sbjct: 398 SVDLTLKVW 406
>sp|Q9C270|PWP2_NEUCR Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=B18D24.40 PE=3 SV=1
Length = 899
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 266 LMISAGYHGDIKVWDFKGRD--LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVV 323
L A G + VW+++ LK + S+ +VY + TVADD I+++D
Sbjct: 311 LAFGASKLGQLLVWEWQSESYILKQQGHFD-SMNSLVYSPDGQRIVTVADDGKIKVWDTE 369
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD--VSITA 381
+ + F HT IT FS+ G L +S +DGS+R WD+I R +S +
Sbjct: 370 SGFCIVTFTEHTSGITACEFSKKGNVLFTSSLDGSIRAWDLIRYRNFRTFTAPERLSFSC 429
Query: 382 LSLSPNMDVLATAHVDQNGVYLW 404
+++ P+ +++A VD +++W
Sbjct: 430 MAVDPSGEIVAAGSVDSFDIHIW 452
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 10/156 (6%)
Query: 251 HNGEVVGVACDSTNTLMISAGYHGDIKVWD------FKGRDLKSRWEVGCSLVKIVYHRV 304
H + ++ ++ G I+ WD F+ R C V V
Sbjct: 380 HTSGITACEFSKKGNVLFTSSLDGSIRAWDLIRYRNFRTFTAPERLSFSCMAVDPSGEIV 439
Query: 305 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
A D I ++ V +++ + GH ++ F+ +G L+S D + RIW +
Sbjct: 440 ---AAGSVDSFDIHIWSVQTGQLLDRLSGHEGPVSSLAFAPNGGLLVSGSWDRTARIWSI 496
Query: 365 ILARQI-DAIHVDVSITALSLSPNMDVLATAHVDQN 399
Q + + ++ + ++ P+ +A + +D N
Sbjct: 497 FNRTQTSEPLQLNSDVLDIAFRPDSLQIAISTLDGN 532
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 308 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 367
LAT +D IR++D+ R+ R GH I FS+DGK L+S D ++ +WDV
Sbjct: 361 LATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAG 420
Query: 368 RQIDAIHVDVSITALSLSPNMDVLATAHVDQ 398
Q +H D +T + SP+ +A +D+
Sbjct: 421 EQKLILHTDDGVTTVMFSPDGQFIAAGSLDK 451
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
VT + FS DGQ +A+G+ VI IW ++ + H+ ++ S+ F + L+S
Sbjct: 431 GVTTVMFSPDGQ-FIAAGSLDKVIRIWTSSGTLVEQL--HGHEESVYSVAFSPDGKYLVS 487
Query: 64 ASADNSIKMWIFD-TTDGDPRLLR-------FRSGHSAPPLCIRFYANGRHILSAGQDRA 115
S DN+IK+W ++ P + + +GH L + +G+ I+S +DR
Sbjct: 488 GSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRT 547
Query: 116 FRLFS 120
+ +S
Sbjct: 548 IQFWS 552
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 51/324 (15%)
Query: 91 HSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARKLKMKEEELK 150
H++ +RF A+G+ L+ G +RA +F+V + + L Q +KR L ++ +
Sbjct: 298 HTSVICYVRFSADGK-FLATGCNRAAMVFNV-ETGKLITLLQEESSKREGDLYVRS--VA 353
Query: 151 LKP---VIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKA 207
P +A + + R W D AQ V+RL L H + +
Sbjct: 354 FSPDGKYLATGVEDQQIRIW--------DIAQKRVYRL----LTGH--------EQEIYS 393
Query: 208 CTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLM 267
S G V G+ + +++++G E+ H + V S +
Sbjct: 394 LDFSKDGKTLVSGSGDRTVCLWDVEAG----------EQKLILHTDDGVTTVMFSPDGQF 443
Query: 268 ISAGYHGD-IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV---- 322
I+AG I++W G ++ S+ + + L + + D I+L+++
Sbjct: 444 IAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVS 503
Query: 323 -VALRMVRK-------FEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR-QIDAI 373
VA M ++ F GH D I S DGKW++S D +++ W Q+
Sbjct: 504 NVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQ 563
Query: 374 HVDVSITALSLSPNMDVLATAHVD 397
+ S+ ++++SPN AT D
Sbjct: 564 GHNNSVISVAVSPNGHCFATGSGD 587
Score = 40.0 bits (92), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 10 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH-----DNAIISLHFFANEPVLMSA 64
FS+DG+ LA+G + + ++N+E +L ++++E D + S+ F + L +
Sbjct: 307 FSADGK-FLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATG 364
Query: 65 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 124
D I++W R+ R +GH + F +G+ ++S DR L+ V
Sbjct: 365 VEDQQIRIWDI----AQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAG 420
Query: 125 QQ 126
+Q
Sbjct: 421 EQ 422
>sp|D3BUN1|LIS1_POLPA Lissencephaly-1 homolog OS=Polysphondylium pallidum PE=3 SV=1
Length = 417
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 146/366 (39%), Gaps = 60/366 (16%)
Query: 2 RGAVTALAFSSDGQPLLA---SGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 58
R + A+ F PL + S + + IW+ + + ++ H NA+ + F +
Sbjct: 104 RNCINAVRF----HPLFSVIVSASEDATMRIWDFDSGDFERTLK-GHTNAVQDIDFDKSG 158
Query: 59 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 118
+L S SAD +IK+W F + D ++ GH C+RF +G ++S+ +D++ ++
Sbjct: 159 NLLASCSADLTIKLWDFQSFD----CIKTLHGHDHNVSCVRFLPSGDQLVSSSRDKSIKV 214
Query: 119 FSVIQDQQSRELSQRHVAKRARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTA 178
+ ++ L+ E+ K +++ D + +C D
Sbjct: 215 WETATGYCTKTLTGH-------------EDWVRKVIVS--------EDGTTLASCSNDQT 253
Query: 179 QAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRG 238
A VW N GE +L E+ V+ S V G+ L + +
Sbjct: 254 -ARVW---NLAKGECLL-TFREHSHVVECLAYSPANIVEVPGSL--------LSTPEGKA 300
Query: 239 SYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLV 297
+ +++ G + + D T IK+W+ GR L++ +
Sbjct: 301 KAKAGAGGTSFGQAGYLATGSRDKT------------IKIWELATGRCLQTYIGHDNWVR 348
Query: 298 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF-EGHTDRITDFCFSEDGKWLLSSGMD 356
I +H L +V DD IR++D+ R ++ E H+ I+ F + + G+D
Sbjct: 349 SIKFHPCGKYLISVGDDKSIRVWDIAQGRCIKTINEAHSHFISCLDFCSHNPHIATGGVD 408
Query: 357 GSLRIW 362
++IW
Sbjct: 409 DIIKIW 414
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 306 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
G LAT + D I+++++ R ++ + GH + + F GK+L+S G D S+R+WD+
Sbjct: 315 GYLATGSRDKTIKIWELATGRCLQTYIGHDNWVRSIKFHPCGKYLISVGDDKSIRVWDIA 374
Query: 366 LARQIDAIHVDVS--ITALSLSPNMDVLATAHVD 397
R I I+ S I+ L + +AT VD
Sbjct: 375 QGRCIKTINEAHSHFISCLDFCSHNPHIATGGVD 408
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 265 TLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFDVV 323
++++SA +++WDF D + + + V+ I + + LLA+ + DL I+L+D
Sbjct: 117 SVIVSASEDATMRIWDFDSGDFERTLKGHTNAVQDIDFDKSGNLLASCSADLTIKLWDFQ 176
Query: 324 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 364
+ ++ GH ++ F G L+SS D S+++W+
Sbjct: 177 SFDCIKTLHGHDHNVSCVRFLPSGDQLVSSSRDKSIKVWET 217
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 299 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 358
+ +H + ++ + ++D +R++D + R +GHT+ + D F + G L S D +
Sbjct: 110 VRFHPLFSVIVSASEDATMRIWDFDSGDFERTLKGHTNAVQDIDFDKSGNLLASCSADLT 169
Query: 359 LRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
+++WD I +H D +++ + P+ D L ++ D++ + +W
Sbjct: 170 IKLWDFQSFDCIKTLHGHDHNVSCVRFLPSGDQLVSSSRDKS-IKVW 215
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ER+ H V + D + L+ S IK+WDF+ D V V
Sbjct: 139 ERTLKGHTNAVQDIDFDKSGNLLASCSADLTIKLWDFQSFDCIKTLHGHDHNVSCVRFLP 198
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+G L + + D I++++ + GH D + SEDG L S D + R+W+
Sbjct: 199 SGDQLVSSSRDKSIKVWETATGYCTKTLTGHEDWVRKVIVSEDGTTLASCSNDQTARVWN 258
Query: 364 V 364
+
Sbjct: 259 L 259
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V L+ + ++D I+++D A R +GHTD + D F + GK L S
Sbjct: 111 VTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQN 399
D ++++WD I +H D +++++++ PN D + +A D+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLL 308
H V V +LM+SA IKVWD++ D + + V+ I + + LL
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D+ I+L+D +R GH ++ +G ++S+ D ++++W+V
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY 225
Query: 369 QIDAIHVDVSITALSLSPNMD--VLATAHVDQNGVYLWV---NRCMFSGDSNIDSYASGK 423
+ + + PN D +LA+ DQ V +WV C + + +
Sbjct: 226 CVKTFTGHREWVRM-VRPNQDGTLLASCSNDQT-VRVWVVATKEC----KAELREHEHVV 279
Query: 424 EIVS----VKMPSVSSVEGCQDENSSQP 447
E +S P++S G +++ S +P
Sbjct: 280 ECISWAPESAHPTISEATGSENKKSGKP 307
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 129/316 (40%), Gaps = 40/316 (12%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
L+ S + I +W+ E + ++ H +++ + F +L S SAD +IK+W F
Sbjct: 122 LMVSASEDATIKVWDYEAGDFERTLK-GHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ 180
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS-QRHV 135
+ +R GH + NG HI+SA +D+ +++ V + + R
Sbjct: 181 GFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREW 236
Query: 136 AKRARKLK--------MKEEELKLKPVIAFDC-AEIRERDWCNVVTCHMDTAQAYVWRLQ 186
+ R + ++ +++ V +C AE+RE + +VV C W +
Sbjct: 237 VRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHE--HVVEC-------ISWAPE 287
Query: 187 NFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSER 246
+ P T + G F + G+ I+ +++ +G+ + +
Sbjct: 288 S-------AHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLV----- 335
Query: 247 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVN 305
H+ V GV ++S +++WD+K R +K+ + + +H+ +
Sbjct: 336 ---GHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAS 392
Query: 306 GLLATVADDLVIRLFD 321
+ T + D +++++
Sbjct: 393 PYVVTGSVDQTVKVWE 408
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ER+ H V ++ D T L+ S IK+WDF+G + V V
Sbjct: 143 ERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
NG + + + D +++++V V+ F GH + + ++DG L S D ++R+W
Sbjct: 203 NGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW- 261
Query: 364 VILARQIDA 372
V+ ++ A
Sbjct: 262 VVATKECKA 270
Score = 39.7 bits (91), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDQTGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D ++KMW T ++ +GH +R +G + S D+ R++ V
Sbjct: 210 ASRDKTMKMWEVATG----YCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVAT 265
Query: 124 DQQSRELSQ 132
+ EL +
Sbjct: 266 KECKAELRE 274
Score = 37.4 bits (85), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
G + S A + IW+ + +R + AH++ + SL F P +++ S D ++K+W
Sbjct: 349 GGRFVVSCADDKTLRIWDYKNKRCMKTL-SAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 266 LMISAGYHGDIKVWDFK---------GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLV 316
++S IK+WD G D W G +++H + + ADD
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHD---NWVRG-----VLFHPGGRFVVSCADDKT 361
Query: 317 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+R++D R ++ H +T F + ++++ +D ++++W+
Sbjct: 362 LRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 296 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 355
+ ++++H V ++ T ++D I+++D A R +GHTD + D F + GK L S
Sbjct: 111 VTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSA 170
Query: 356 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 404
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLL 308
H V V ++M+++ IKVWD++ D + + V+ I + + LL
Sbjct: 106 GHRSPVTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 309 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 368
A+ + D+ I+L+D +R GH ++ +G ++S+ D ++++W+V
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY 225
Query: 369 QIDAIHVDVSITALSLSPNMD--VLATAHVDQNGVYLWV 405
+ + + PN D ++A+ DQ V +WV
Sbjct: 226 CVKTFTGHREWVRM-VRPNQDGSLIASCSNDQT-VRVWV 262
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 115/283 (40%), Gaps = 49/283 (17%)
Query: 17 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 76
++ + + I +W+ E + ++ H +++ + F +L S SAD +IK+W F
Sbjct: 122 VMVTSSEDATIKVWDYEAGDFERTLK-GHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ 180
Query: 77 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS-QRHV 135
+ +R GH + NG HI+SA +D+ +++ V + + R
Sbjct: 181 GFE----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW 236
Query: 136 AKRARKLK--------MKEEELKLKPVIAFDC-AEIRERDWCNVVTCHMDTAQAYVWRLQ 186
+ R + ++ +++ + +C AE+RE + +VV C W
Sbjct: 237 VRMVRPNQDGSLIASCSNDQTVRVWVATSKECKAELREHE--HVVEC-------IAW--- 284
Query: 187 NFVLGEHILRPCPENPTAVKACTISA-----CGNFAVLGTAGGWIERFNLQSGISRGSYL 241
P +PT ++A + + G F + G+ I+ +++ +G+ + +
Sbjct: 285 ---------APDTAHPTILEATSSESKKNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLV 335
Query: 242 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR 284
H+ V GV ++S +++WD+K +
Sbjct: 336 --------GHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYKNK 370
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 245 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 304
ER+ H V ++ D T L+ S IK+WDF+G + V V
Sbjct: 143 ERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 305 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 362
NG + + + D I++++V V+ F GH + + ++DG + S D ++R+W
Sbjct: 203 NGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVW 261
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 4 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 63
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N ++S
Sbjct: 152 SVQDISFDQTGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVS 209
Query: 64 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
AS D +IKMW T ++ +GH +R +G I S D+ R++
Sbjct: 210 ASRDKTIKMWEVATG----YCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATS 265
Query: 124 DQQSRELSQ 132
+ EL +
Sbjct: 266 KECKAELRE 274
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 14 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 73
G + S A + IW+ + +R + AH++ + SL P +++ S D ++K+W
Sbjct: 349 GGRFIVSCADDKTLRIWDYKNKRCMKTLC-AHEHFVTSLDMHQTAPYVVTGSVDQTVKVW 407
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 307 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 366
L + + D I+++D+ + GH + + G++++S D +LRIWD
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYKN 369
Query: 367 ARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLWVNR 407
R + + + +T+L + + T VDQ V +W R
Sbjct: 370 KRCMKTLCAHEHFVTSLDMHQTAPYVVTGSVDQT-VKVWECR 410
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1
Length = 504
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 250 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK----GRDLKSRWE--VGCSLVKIVYHR 303
AH V G++ +T ++S+ D + W F GR L + GCSL +H
Sbjct: 304 AHESAVTGLSLHATGDYLLSSS---DDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP 360
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
+ T D I+++D+ V F GH+ IT FSE+G +L ++ D S+++WD
Sbjct: 361 DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 420
Query: 364 VILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYL 403
+ + + +D + SL DQ+G YL
Sbjct: 421 LRKLKNFKTLQLDNNFEVKSLI----------FDQSGTYL 450
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 304 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 363
N +L AD V+ +FD + +++ +GHT ++T F + + S+ D ++RIW
Sbjct: 234 TNKILTGGADKNVV-VFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292
Query: 364 VILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQ 398
V A + + + ++T LSL D L ++ DQ
Sbjct: 293 VPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ 328
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 3 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 62
G +T++AFS +G LA+ A + +W+L K + ++ ++ + SL F + L
Sbjct: 393 GPITSIAFSENGY-YLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLA 451
Query: 63 SASADNSI---KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 119
D I K W +L F + HS + F + + I S G DR+ + +
Sbjct: 452 LGGTDVQIYICKQWT--------EILHF-TEHSGLTTGVAFGHHAKFIASTGMDRSLKFY 502
Query: 120 SV 121
S+
Sbjct: 503 SL 504
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 14/178 (7%)
Query: 251 HNGEVVGVA----CDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV-KIVYHRVN 305
H+ + G+ C S +++ G ++ V+D + + + V +V+H
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 306 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 365
L+ + + D IR++ V V+ H +T G +LLSS D D+
Sbjct: 277 ELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQ 336
Query: 366 LARQIDAIHVDV---SITALSLSPNMDVLATAHVDQNGVYLW-----VNRCMFSGDSN 415
R + + + S+T P+ + T +D + +W N F G S
Sbjct: 337 TGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQ-IKIWDLKERTNVANFPGHSG 393
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 48/158 (30%)
Query: 5 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 64
VT++ F Q L+ S + I IW++ V+R AH++A+ L A L+S+
Sbjct: 267 VTSVVFHPS-QELVFSASPDATIRIWSVPNASCVQVVR-AHESAVTGLSLHATGDYLLSS 324
Query: 65 SADNSIKMWIF-------------DTTDG--------DPRLLRFRSG------------- 90
S D + W F D T G P L F +G
Sbjct: 325 SDD---QYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKE 381
Query: 91 ---------HSAPPLCIRFYANGRHILSAGQDRAFRLF 119
HS P I F NG ++ +A D + +L+
Sbjct: 382 RTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 12 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 71
SD +L GA V+ +++ ++ + ++ H + S+ F ++ ++ SAS D +I+
Sbjct: 232 SDTNKILTGGADKNVV-VFDKSSEQILATLK-GHTKKVTSVVFHPSQELVFSASPDATIR 289
Query: 72 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 123
+W + ++ H + + +A G ++LS+ D+ + FS IQ
Sbjct: 290 IWSVP----NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ-YWAFSDIQ 336
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,640,444
Number of Sequences: 539616
Number of extensions: 10707829
Number of successful extensions: 36009
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 549
Number of HSP's that attempted gapping in prelim test: 26491
Number of HSP's gapped (non-prelim): 8170
length of query: 685
length of database: 191,569,459
effective HSP length: 124
effective length of query: 561
effective length of database: 124,657,075
effective search space: 69932619075
effective search space used: 69932619075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)