BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005660
(685 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54X16|GID8_DICDI Glucose-induced degradation protein 8 homolog OS=Dictyostelium
discoideum GN=DDB_G0279265 PE=3 SV=2
Length = 228
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 61 IRRSLEYGDIDAAIDLLRAHAPFILDDH-RLLFRLQKQKFIELLRRGTTEDRKSAINCLR 119
IR +++ GD++ I+++ P ILD + +L F LQ+QK IEL+R+G T + A+ +
Sbjct: 74 IRSAIQCGDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAE---ALKFAQ 130
Query: 120 TALAPCALDAYPEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAG-LMSSVLRAH 178
LAP + + EE + + +++ D SP++ +R + AG L S++L +
Sbjct: 131 DELAPQG-EENNKFLEELEKTISLLVFE-DTAKSPLSSLLDHSQRQKTAGELNSAILLSQ 188
Query: 179 LHAYDPVFAMTLRYL 193
DP L+ L
Sbjct: 189 SQDKDPKLPTILKLL 203
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 452 GMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASH 511
G + +E +N ++ + NP L F L+Q + ++L+ G + AL+ A L P +
Sbjct: 81 GDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEALKFAQDELAPQGEEN 140
Query: 512 PALLKPLKETLLALL 526
L+ L++T+ L+
Sbjct: 141 NKFLEELEKTISLLV 155
>sp|A7SWD3|GID8_NEMVE Glucose-induced degradation protein 8 homolog OS=Nematostella
vectensis GN=v1g247787 PE=3 SV=1
Length = 225
Score = 40.0 bits (92), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 60 QIRRSLEYGDIDAAIDLLRAHAPFILD-DHRLLFRLQKQKFIELLRRGTTEDRKSAINCL 118
+IR +++ GD++ A+ + P ILD + +L F LQ+Q+ IEL+R +D ++A+
Sbjct: 66 KIREAVQKGDLEQAVSMTNKLNPDILDSNQQLYFHLQQQRLIELIRE---KDIEAAVEFA 122
Query: 119 RTALAPCALDA--YPEAYEEFKHVLLTFIYDKDDP-TSPVAIEWAERRRFEIAG-LMSSV 174
+ + ++ Y E E+ LL F D+P SP +R ++A L +++
Sbjct: 123 QGQFSEQGQESGRYLEELEQ-TMALLAF----DNPEESPFGDLLHTSQRQKVASELNAAI 177
Query: 175 LRAHLHAYDPVFAMTLRYLI 194
L A P A L+ L+
Sbjct: 178 LEAEHKKTQPKLANVLKLLL 197
>sp|Q5ZKQ7|GID8_CHICK Glucose-induced degradation protein 8 homolog OS=Gallus gallus
GN=GID8 PE=2 SV=1
Length = 228
Score = 39.7 bits (91), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 60 QIRRSLEYGDIDAAIDLLRAHAPFILDDHRLL-FRLQKQKFIELLRRGTTEDRKSAINCL 118
+IR + G I AI L+ + P +LD +R L F LQ+Q IEL+R+ TE +A+
Sbjct: 69 KIREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETE---AALEFA 125
Query: 119 RTALA 123
+T LA
Sbjct: 126 QTQLA 130
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 443 LGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACA 502
+ ++E+ KG EA+ IN++ + N L F L+Q ++L+ + AL A
Sbjct: 68 IKIREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQT 127
Query: 503 HLGPLAASHPALLKPLKET--LLALLQPNE 530
L L ++ T LLA P E
Sbjct: 128 QLAEQGEESRECLTEMERTLALLAFDNPEE 157
>sp|Q9NWU2|GID8_HUMAN Glucose-induced degradation protein 8 homolog OS=Homo sapiens
GN=GID8 PE=1 SV=1
Length = 228
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 60 QIRRSLEYGDIDAAIDLLRAHAPFILDDHRLL-FRLQKQKFIELLRRGTTEDRKSAINCL 118
+IR + G I AI L+ + P +LD +R L F LQ+Q IEL+R+ TE +A+
Sbjct: 69 KIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETE---AALEFA 125
Query: 119 RTALA 123
+T LA
Sbjct: 126 QTQLA 130
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 443 LGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACA 502
+ ++E+ KG EA+ IN++ + N L F L+Q ++L+ + AL A
Sbjct: 68 IKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQT 127
Query: 503 HLGPLAASHPALLKPLKET--LLALLQPNEDVLVKGFPLHTL 542
L L ++ T LLA P E G LHT+
Sbjct: 128 QLAEQGEESRECLTEMERTLALLAFDSPEESPF--GDLLHTM 167
>sp|Q9D7M1|GID8_MOUSE Glucose-induced degradation protein 8 homolog OS=Mus musculus
GN=Gid8 PE=2 SV=1
Length = 228
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 60 QIRRSLEYGDIDAAIDLLRAHAPFILDDHRLL-FRLQKQKFIELLRRGTTEDRKSAINCL 118
+IR + G I AI L+ + P +LD +R L F LQ+Q IEL+R+ TE +A+
Sbjct: 69 KIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETE---AALEFA 125
Query: 119 RTALA 123
+T LA
Sbjct: 126 QTQLA 130
Score = 33.9 bits (76), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 443 LGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACA 502
+ ++E+ KG EA+ IN++ + N L F L+Q ++L+ + AL A
Sbjct: 68 IKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQT 127
Query: 503 HLGPLAASHPALLKPLKET--LLALLQPNE 530
L L ++ T LLA P E
Sbjct: 128 QLAEQGEESRECLTEMERTLALLAFDSPEE 157
>sp|Q32L52|GID8_BOVIN Glucose-induced degradation protein 8 homolog OS=Bos taurus GN=GID8
PE=2 SV=1
Length = 228
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 60 QIRRSLEYGDIDAAIDLLRAHAPFILDDHRLL-FRLQKQKFIELLRRGTTEDRKSAINCL 118
+IR + G I AI L+ + P +LD +R L F LQ+Q IEL+R+ TE +A+
Sbjct: 69 KIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETE---AALEFA 125
Query: 119 RTALA 123
+T LA
Sbjct: 126 QTQLA 130
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 443 LGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACA 502
+ ++E+ KG EA+ IN++ + N L F L+Q ++L+ + AL A
Sbjct: 68 IKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQT 127
Query: 503 HLGPLAASHPALLKPLKETLLAL 525
L L ++ TL L
Sbjct: 128 QLAEQGEESRECLTEMERTLALL 150
>sp|Q6PC55|GID8_DANRE Glucose-induced degradation protein 8 homolog OS=Danio rerio
GN=gid8 PE=2 SV=1
Length = 228
Score = 36.2 bits (82), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 443 LGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACA 502
+ ++E+ KG EA+ IN++ + N L F L+Q ++L+ + AL A +
Sbjct: 68 IKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFAQS 127
Query: 503 HLGPLAASHPALLKPLKET--LLALLQPNE 530
L L ++ T LLA P E
Sbjct: 128 QLAEQGEESRECLTEMERTLALLAFDNPEE 157
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 60 QIRRSLEYGDIDAAIDLLRAHAPFILDDHRLL-FRLQKQKFIELLRRGTTE 109
+IR + G I AI L+ + P +LD +R L F LQ+Q IEL+R TE
Sbjct: 69 KIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETE 119
>sp|Q7S2X0|FYV10_NEUCR Protein fyv-10 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=fyv-10 PE=3 SV=1
Length = 410
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 56 LIIRQIRRSLEYGDIDAAIDLLRAHAPFILD-DHRLLFRLQKQKFIELLRRGTTEDRKSA 114
L + +IR SLE G + A+ + + L F L+ Q++IELLR T A
Sbjct: 165 LTMSKIRESLENGSVTEALAWCNDNKKELRKLQSNLEFLLRCQQYIELLRINTPSKSVEA 224
Query: 115 INCLRTALAPCALDAYPEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSV 174
I + +AP + YP+ E +L DK+ P A W R+ L +S
Sbjct: 225 ITHAKKYIAPFQ-EQYPDEVREMAALLAHRPTDKNLPLKYAA--WYSPDRW--TKLATSF 279
Query: 175 LRAH 178
+ AH
Sbjct: 280 VEAH 283
>sp|Q8Y1D2|T23O1_RALSO Tryptophan 2,3-dioxygenase 1 OS=Ralstonia solanacearum (strain
GMI1000) GN=kynA1 PE=3 SV=1
Length = 294
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 34 PSSPSSSSTSSVSLSSSSYHSRLIIRQIRRSLEYGDIDAAIDLLRAHAPFILDDHRLLFR 93
P+ P++S + S+H + +S+ YGD A +L A P D + +LF
Sbjct: 7 PTRPAASGCPMHGAQAESWHDAQM--DFSKSMSYGDYLALDQILNAQHPRSPDHNEMLFI 64
Query: 94 LQKQKFIELLRRGTTEDRKSAINCLRTALAPCAL 127
+Q Q EL + + ++A +C+R P A
Sbjct: 65 VQHQT-TELWMKLMLHELRAARDCVRNDDLPPAF 97
>sp|P56744|DAT_ACIBA Diaminobutyrate--2-oxoglutarate aminotransferase OS=Acinetobacter
baumannii GN=dat PE=1 SV=1
Length = 445
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 524 ALLQPNEDVLVKGFPLHT--LATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMC 581
A++Q +D L G PLHT L T L+ A + L A L E + LQ C
Sbjct: 73 AVIQSIQDTLASGLPLHTLDLTTPLKDA-----------FTEALLAYLPGGKEEYCLQFC 121
Query: 582 ----KDRFESLLRIDLLKEVYTPFLATVAMSKSHADSTQGSSQITISSNARVSEDGSSPN 637
D E+ ++ L + YT + ++ S + T GS +T + +A+ + +G P
Sbjct: 122 GPSGADATEAAIK---LAKTYTGRSSVISFSGGYHGMTHGSLAMTGNLSAKNAVNGLMPG 178
>sp|P27357|TLP_WHEAT Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1
Length = 173
Score = 34.3 bits (77), Expect = 3.3, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 281 SGLSTPSGTQTISIPIKVD---KPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGS 337
S ++ P+GTQ I + SG C + +C ++ CS+S T TI GS
Sbjct: 52 SSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCSLSGRPPA-TLAEYTIGGGS 110
Query: 338 PENNTDVISIQGADVELRFTGGPTGSNEDCSTSGSHQPES 377
++ D+ I G ++ + F+ TG C P++
Sbjct: 111 TQDFYDISVIDGFNLAMDFSCS-TGDALQCRDPSCPPPQA 149
>sp|P32937|PR1A_HORVU Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1
Length = 173
Score = 33.9 bits (76), Expect = 4.2, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 281 SGLSTPSGTQTISIPIKVD---KPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGS 337
S ++ P+GTQ I + SG C + +C ++ CS+S T TI GS
Sbjct: 52 SSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCSLSGQPPA-TLAEFTIGGGS 110
Query: 338 PENNTDVISIQGADVELRFTGGPTGSNEDCSTSGSHQPES 377
++ D+ I G ++ + F+ TG C P++
Sbjct: 111 TQDFYDISVIDGFNLAMDFSCS-TGDALQCRDPSCPPPQA 149
>sp|P32938|PR1C_HORVU Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1
Length = 173
Score = 33.9 bits (76), Expect = 4.6, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 281 SGLSTPSGTQTISIPIKVD---KPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGS 337
S ++ P+GTQ I + SG C + +C ++ CS+S T TI GS
Sbjct: 52 SSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCSLSGRPPA-TLAEFTIGGGS 110
Query: 338 PENNTDVISIQGADVELRFTGGPTGSNEDCSTSGSHQPES 377
++ D+ I G ++ + F+ TG C P++
Sbjct: 111 TQDFYDISVIDGFNLAMDFSCS-TGDALQCRDPSCPPPQA 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,638,883
Number of Sequences: 539616
Number of extensions: 10103791
Number of successful extensions: 35609
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 35407
Number of HSP's gapped (non-prelim): 211
length of query: 685
length of database: 191,569,459
effective HSP length: 124
effective length of query: 561
effective length of database: 124,657,075
effective search space: 69932619075
effective search space used: 69932619075
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)