Your job contains 1 sequence.
>005661
MFSFFFSLGNGFSNTQRRFQSNYVGSLARRVRDADEASEVAHLRELYRRNDPEAVIRLFE
SQPSLHSNQSALSEYVKALVKVDRLDDSELLKTLQKGIANSARDEESIGGISAFKNVGKP
TKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLH
EEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGK
TMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGG
SRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPN
PDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIAALKAAMDGAKAVT
MADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGM
SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLAR
AMVTKYGMSKEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKEL
HALANALLEHETLSGSQIKALLAQVNSQQQQQHQQIVQSQNNSQSNPVPPPSTPNPAASA
AAAAAAAAAAAKAAAQAKGIAPVGS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005661
(685 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 2500 8.9e-260 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 1251 2.0e-127 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 1193 2.8e-121 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 1158 2.2e-120 2
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 1159 1.1e-117 1
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 1140 1.2e-115 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 1130 1.3e-114 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 1130 1.3e-114 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 1129 1.7e-114 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 1129 1.7e-114 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 1127 2.8e-114 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 1090 4.8e-114 2
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 1090 4.8e-114 2
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 1118 2.5e-113 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 1115 5.2e-113 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 1107 3.6e-112 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 1107 3.6e-112 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 1106 4.6e-112 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 1106 4.6e-112 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 1104 7.6e-112 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 1104 7.6e-112 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 1100 2.0e-111 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 1099 2.6e-111 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 1098 3.3e-111 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 1051 3.1e-106 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 1049 5.1e-106 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 1041 3.6e-105 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 1041 3.6e-105 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 1041 3.6e-105 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 1002 6.5e-104 2
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 1027 1.1e-103 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 1019 7.7e-103 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 1016 1.6e-102 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 1015 2.0e-102 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 1015 2.0e-102 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 1010 6.9e-102 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 1001 6.2e-101 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 985 3.1e-99 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 947 3.3e-95 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 947 3.3e-95 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 900 3.1e-90 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 891 2.8e-89 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 885 1.2e-88 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 880 4.1e-88 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 880 4.1e-88 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 879 5.3e-88 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 878 6.7e-88 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 874 1.8e-87 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 873 2.3e-87 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 869 6.0e-87 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 868 7.7e-87 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 868 7.7e-87 1
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 854 2.4e-85 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 852 3.8e-85 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 846 1.7e-84 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 827 1.7e-82 1
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 823 4.5e-82 1
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 817 2.0e-81 1
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 813 5.2e-81 1
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 500 5.5e-81 2
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 500 5.5e-81 2
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 812 6.6e-81 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 812 6.6e-81 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 810 1.1e-80 1
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 808 1.8e-80 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 804 4.7e-80 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 802 7.6e-80 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 802 7.6e-80 1
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 792 8.7e-79 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 791 1.1e-78 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 791 1.1e-78 1
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 790 1.4e-78 1
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 787 3.0e-78 1
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 784 6.2e-78 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 783 7.9e-78 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 732 3.9e-77 3
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 771 1.5e-76 1
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 763 1.0e-75 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 739 3.6e-73 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 717 8.6e-73 2
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 706 7.6e-72 2
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 696 1.6e-71 2
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 714 1.6e-70 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 690 3.7e-70 2
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 707 8.9e-70 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 705 1.4e-69 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 701 3.8e-69 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 700 4.9e-69 1
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 418 1.6e-59 2
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 418 1.6e-59 2
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 604 2.8e-58 1
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 551 2.4e-56 2
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 564 1.3e-54 1
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 546 1.0e-52 1
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 521 1.6e-50 2
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 492 1.4e-46 2
TAIR|locus:2206380 - symbol:FTSH12 "FTSH protease 12" spe... 425 8.8e-39 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 406 7.0e-38 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 413 1.2e-36 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 380 6.6e-35 1
WARNING: Descriptions of 557 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 2500 (885.1 bits), Expect = 8.9e-260, P = 8.9e-260
Identities = 492/605 (81%), Positives = 534/605 (88%)
Query: 18 RFQSNYVGSLARRVRDADEASEVAHLRELYRRNDPEAVIRLFESQPSLHSNQSALSEYVK 77
RFQS+YVGS ARRVRD +E +EVAHLREL RRNDPEAVIR+FESQPSLH+N SALSEY+K
Sbjct: 51 RFQSSYVGSFARRVRDREEVNEVAHLRELIRRNDPEAVIRMFESQPSLHANASALSEYIK 110
Query: 78 ALVKVDRLDDSELLKTLQKGIANSARDEESIGGISAFKNVGKPTKDGVLGTASAPIHMVA 137
ALVKVDRLD SEL++TLQ+GIA AR+EE+ GG+ AF+NVGKPTKDGVLGTASAPIH ++
Sbjct: 111 ALVKVDRLDQSELVRTLQRGIAGVAREEETFGGLGAFRNVGKPTKDGVLGTASAPIHTIS 170
Query: 138 AEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVK 197
E HFKEQLW TIRTI +GFLLISG+GALIEDRGI KGLGLHEEVQPS++S+TKFSDVK
Sbjct: 171 TERTHFKEQLWSTIRTIGVGFLLISGIGALIEDRGIGKGLGLHEEVQPSMDSSTKFSDVK 230
Query: 198 GVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFS 257
GVDEAK ELEEIVHYLRDPKRFTR TMLARAIAGEAGVPFFS
Sbjct: 231 GVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFS 290
Query: 258 CSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQL 317
CSGSEFEEMFVGVGARRVRDLFSAAKK SPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQ+
Sbjct: 291 CSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQM 350
Query: 318 LVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKV 377
LVELDGFKQNEGIIV+AATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI+ESHMSKV
Sbjct: 351 LVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKV 410
Query: 378 LKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSER 437
LKA+DVDLMIIARGTPGFSGADLANLVN+ VTM+DLE+AKD+IMMGSER
Sbjct: 411 LKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSER 470
Query: 438 KSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSIS 497
KSAVISDESRKLTAFHEGGHALVA+HT+GALPVHKATIVPRGM+LGMV+QLPDKDETSIS
Sbjct: 471 KSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKATIVPRGMALGMVSQLPDKDETSIS 530
Query: 498 RKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTH 557
RKQMLARLDVCMGGRVAEELIFGE+EVTSGASSDL+QATKLARAMVTK+GMSKEVG+V H
Sbjct: 531 RKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGMSKEVGLVAH 590
Query: 558 NYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXXXXXXXXSGSQ 617
NYDDNGKSMSTETRLLIE EV+ L++AYNNAKTILT+++K SG Q
Sbjct: 591 NYDDNGKSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQ 650
Query: 618 IKALL 622
IK LL
Sbjct: 651 IKELL 655
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 1251 (445.4 bits), Expect = 2.0e-127, P = 2.0e-127
Identities = 288/610 (47%), Positives = 382/610 (62%)
Query: 35 DEASEVAHLRELYRRNDPEAVIRLFESQPSLHSNQS-ALSEYVKALVKVDR----LDDSE 89
D A + A L EL ++ PEAV++ FE + H+ S ++EY++ALV + L D +
Sbjct: 189 DAALQGALLAEL-NKHIPEAVVQRFEQRE--HTVDSRGVAEYIRALVITNAISEYLPDEQ 245
Query: 90 LLKTLQKGIANSARDEESIGGIS-AFKNVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLW 148
K + G + +F N G K + T P + F ++L
Sbjct: 246 TGKPSSLPALLQELKHRASGNMDESFVNPGISEKQPLHVTMVNP---KVSNKSRFAQELV 302
Query: 149 RTIR-TIALGFLLISGVGALIEDRGISKGLG--------------LHEEVQPSLESNTK- 192
TI T+A+G + I G AL + G G+G L++E+ P E N K
Sbjct: 303 STILFTVAVGLVWIMGAAALQKYIGSLGGIGTSGVGSSSSYSPKELNKEITP--EKNVKT 360
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DVKG D+AKQELEE+V YL++P +FTR T+LA+AIAGEAG
Sbjct: 361 FKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 420
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKM 312
VPFF +GSEFEEMFVGVGARRVR LF AAKK++PCIIFIDEIDA+G +R + + + K
Sbjct: 421 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHTKK 479
Query: 313 TLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMES 372
TL+QLLVE+DGF+QNEGIIV+AATN P+ LD AL RPGRFDRHIVVP+PDV GR +I+E
Sbjct: 480 TLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILEL 539
Query: 373 HMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIM 432
++ ++DVD+ IARGTPGF+GADLANLVNI ++ LE+AKD+I+
Sbjct: 540 YLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIV 599
Query: 433 MGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKD 492
MG+ERK+ +S++S+KLTA+HE GHA+VA++T GA P+HKATI+PRG +LGMV QLP D
Sbjct: 600 MGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPSND 659
Query: 493 ETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEV 552
ETS+S++Q+LARLDVCMGGRVAEELIFG + +T+GASSDL QAT+LA+ MV+ GMS+ +
Sbjct: 660 ETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEAI 719
Query: 553 GVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXXXXXXX 612
G V H + M + I+ EV L AY K++L H K
Sbjct: 720 GPV-HIKERPSSDMQSR----IDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYET 774
Query: 613 XSGSQIKALL 622
+ IK +L
Sbjct: 775 LTAEDIKRIL 784
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 257/566 (45%), Positives = 354/566 (62%)
Query: 38 SEVAHLRELYRRNDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSE-----LLK 92
++ A + L + N P+ V+ FE+ P + S+ + Y++AL ++ R +++ LL
Sbjct: 120 AQAAFYKLLLQSNYPQYVVSRFET-PGIASSPECMELYMEALQRIGRHSEADAVRQNLLT 178
Query: 93 TLQKGIANSARDEESIGGISAFKNVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIR 152
G N + S S + + G+ P+H+V +E W ++
Sbjct: 179 ASSAGAVNPSLASSS-SNQSGYHGNFPSMYSPLYGSRKEPLHVVVSESTFTVVSRW--VK 235
Query: 153 -TIALGFLLIS---GVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEE 208
+ G L S G + E+ + K + ++ ++N KF DV G DEA+ ELEE
Sbjct: 236 WLLVFGILTYSFSEGFKYITENTTLLKSSEVADKSVDVAKTNVKFDDVCGCDEARAELEE 295
Query: 209 IVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFV 268
IV +L+DP ++ T+LARA AGEAGV FF SGSEF+E++V
Sbjct: 296 IVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYV 355
Query: 269 GVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNE 328
GVGA+R+RDLF+ A+ R+P IIFIDE+DAIGG RNPKDQ Y K TLNQLLVELDGF Q
Sbjct: 356 GVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDGFSQTS 415
Query: 329 GIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMII 388
GII+I ATNFPE+LDKAL RPGRFD+ + V PDV GR I++ HM K+ AD+VD II
Sbjct: 416 GIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTII 475
Query: 389 ARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRK 448
ARGTPG SGA+LANLVN V M+ E+AKDKI+MG+ERK+ V++D +RK
Sbjct: 476 ARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTDAARK 535
Query: 449 LTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVC 508
TAFHE GHA++A +T+GA P++KATI+PRG +LG+ QLP+ D+ I++++ ARLDVC
Sbjct: 536 ATAFHEAGHAIMAKYTNGATPLYKATILPRGRALGITFQLPEMDKVDITKRECQARLDVC 595
Query: 509 MGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNGKSMST 568
MGG++AEELI+G++ TSG SDLQ AT ARAMVT+YGMS +VG V N +N +S S
Sbjct: 596 MGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPV--NLSENWESWSN 653
Query: 569 ETRLLIEKEVRNFLDRAYNNAKTILT 594
+ R + + EV L + A+ +LT
Sbjct: 654 KIRDIADNEVIELLKDSEERARRLLT 679
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 1158 (412.7 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 245/493 (49%), Positives = 334/493 (67%)
Query: 117 VGKPT-KDGVLGTAS-APIHMVAAEGGHFKE-QLWRTIRTIALG-FLLISGVGALIEDRG 172
V PT LGT+S P+++V E K ++++ I +++ + ++ G+ E G
Sbjct: 184 VWAPTIVSSALGTSSKTPVYVVVDEPRFTKFFRIFKFIAGLSVASYFVLLGMSIFAETSG 243
Query: 173 ISKGLGLHEEVQPSLES--NTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXX 230
++ + E +P E N +FSDV+GVDEAK+ELEEIV +LRDP FTR
Sbjct: 244 LNNIMTNTTEQEPMEERAINVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGV 303
Query: 231 XXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCII 290
TMLARA+AGEA VPFF SGS+F+EM+VGVGA+RVR+LF+AA+K++P II
Sbjct: 304 LLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSII 363
Query: 291 FIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEG----IIVIAATNFPESLDKAL 346
FIDE+DAIG RN +D +M+ TLNQLLV+LDGF +NE ++ I ATNFPESLD AL
Sbjct: 364 FIDELDAIGQKRNARDAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPAL 423
Query: 347 VRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNI 406
RPGRFDRHI VP PDV GR I+ H V DVDL IIARGT GF+GADLANL+N
Sbjct: 424 TRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQ 483
Query: 407 XXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDG 466
V+M DLE++KD+I+MG+ERKSA I+ E++ +TA+HEGGHALVA+ T
Sbjct: 484 AAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKN 543
Query: 467 ALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTS 526
A+ +KATI+PRG SLGM LPD D+ S +R++ LA LDV MGGR AEEL++G++++TS
Sbjct: 544 AMRPYKATIMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITS 603
Query: 527 GASSDLQQATKLARAMVTKYGMSKEVGVVTHNYD-DNGKSMSTETRLLIEKEVRNFLDRA 585
GA +D+ +AT++AR MVT++GMS +G V+ + DN +S TR L+E E+++ L+ +
Sbjct: 604 GAHNDIDKATQVARRMVTEFGMSDRIGPVSLEAEMDN---LSPATRALVESEIKSLLEAS 660
Query: 586 YNNAKTILTMHSK 598
Y + ++L H K
Sbjct: 661 YERSLSLLKSHKK 673
Score = 47 (21.6 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 25/92 (27%), Positives = 39/92 (42%)
Query: 45 ELYRR---NDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSELLKTLQKGIANS 101
+LY+ N PEA+I +E+Q + N + Y +AL K + L + ++S
Sbjct: 76 KLYKELADNFPEAIISRYETQ-GVARNSACDRYYQEALRK--KSWSRSLSNNISLSQSSS 132
Query: 102 ARDEESIGGISAFK-NVGKPTKDGVLGTASAP 132
+ S AF V K T D +S P
Sbjct: 133 SPATSSFSDPKAFSAGVPKFTSDTSSTVSSTP 164
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 251/547 (45%), Positives = 345/547 (63%)
Query: 38 SEVAHLRELYRRNDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSELLKTLQKG 97
+++ + L N P +++ FE+Q + S+ + Y+ AL KV + + + Q+
Sbjct: 77 AQLEFYKTLLAYNYPHILVQRFETQ-GIASSPECVQLYIDALNKVGQTAKAAEVARQQQ- 134
Query: 98 IANSARDEESIGGISAFKNVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLW-RTIRTIAL 156
++ GG N+G G G+ P+H+V +E W + + IAL
Sbjct: 135 --QHQTQYQTNGG-----NIGVGLPYG-FGSRQEPVHVVVSESLLTILSKWLKWLIPIAL 186
Query: 157 -GFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRD 215
+ + L+E+ I + ++ +S +F DV+G DEA+ ELEEIV +L+D
Sbjct: 187 LTYGATNAFNYLVENGTIFRNSETSDKSVDVSQSTVRFKDVQGCDEARAELEEIVDFLKD 246
Query: 216 PKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRV 275
P +FT T+LARA AGEAGVPFF SGSEF+E++VGVGA+R+
Sbjct: 247 PSKFTGLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVPFFFMSGSEFDELYVGVGAKRI 306
Query: 276 RDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAA 335
R+LFS A+ ++P IIFIDE+DAIGG RNPKDQ Y K TLNQLLVELDGF Q EGII+I A
Sbjct: 307 RELFSQARDKAPAIIFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDGFSQTEGIIIIGA 366
Query: 336 TNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGF 395
TNFPESLDKAL RPGRFD+ ++V PDV GR I++ HM V ADDVD IIARGTPG
Sbjct: 367 TNFPESLDKALTRPGRFDKEVIVDLPDVRGRIDILKHHMQNVETADDVDPSIIARGTPGL 426
Query: 396 SGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEG 455
SGA+L NLVN V M E+AKDKI+MG+ +K VI++ESR TA+HE
Sbjct: 427 SGAELMNLVNQAAVHASQLSAPAVDMNHFEWAKDKILMGAAKKKMVITEESRINTAYHEA 486
Query: 456 GHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAE 515
GHA++A+ + GA P++KATI+PRG +LG+ QLP+ D+ +S+++ ARLDVCMGG++AE
Sbjct: 487 GHAIMAMFSKGATPLYKATILPRGRALGITFQLPEMDKVDMSKQECFARLDVCMGGKIAE 546
Query: 516 ELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNGKSMSTETRLLIE 575
E+I G+ VTSG +SDL AT +ARAMVT YGMS ++G V D+ +S S + R + +
Sbjct: 547 EMINGKENVTSGCASDLSNATSVARAMVTSYGMSDKIGPV--RLSDDWESWSPQIRNMAD 604
Query: 576 KEVRNFL 582
EVR++L
Sbjct: 605 NEVRDYL 611
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
Identities = 260/568 (45%), Positives = 355/568 (62%)
Query: 41 AHLRELYRRNDPEAVIRLFESQPSLHSNQSALSE--YVKALVKVDRLDDSELLKTLQKGI 98
A + L R N P VI + S H + +A+SE Y+KAL +V S L +G+
Sbjct: 159 AFYQALLRANMPAIVIERYRSG---HFSSNAVSEQIYLKALERVGG-GVSAPAANLNQGL 214
Query: 99 ANSARDEESIGGISAFKN----VGKPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTI 154
+ +++G A +N +G +K G AP+++V E ++R ++ I
Sbjct: 215 RSD--QIQAVGQAVAAQNQGGQIGISSKQSGTGAKEAPLYVVVEES--LGSAVFRWVKFI 270
Query: 155 AL--GFLLISGV--GALIEDRGISKGL-GLHE-EVQPSLESNTKFSDVKGVDEAKQELEE 208
L F S + ++E G+ K + G H E QP ++ +FSDV G DEAK EL+E
Sbjct: 271 VLFCAFAYASMIVLSIVLETTGVLKNIKGPHSNEAQPEHQT-VRFSDVHGCDEAKDELQE 329
Query: 209 IVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFV 268
+V +L +P+RF+ T+LARA+AGEAGVPFF SGSEF+E++V
Sbjct: 330 LVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEVYV 389
Query: 269 GVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNE 328
GVGA+RVR+LF+ A+ +SP IIFIDE+DAIG RN +D Y+K TLNQLL ELDGF Q+
Sbjct: 390 GVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRNERDAAYVKQTLNQLLTELDGFSQST 449
Query: 329 GIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMII 388
G+I++AATN+PE LDKAL RPGRFDR +VV PDV GR I++ HM V + DVD+ +I
Sbjct: 450 GVIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRMDILKHHMKNVQISTDVDVAVI 509
Query: 389 ARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRK 448
ARGT GFSGADL NLVN VT D +YAKDKI+MG+E +S +I D+ +
Sbjct: 510 ARGTSGFSGADLENLVNQAAIFASRNKQSKVTPKDFDYAKDKIIMGAEARSRIIQDKDKL 569
Query: 449 LTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVC 508
LTA+HE GHALVA + ++P++K TI+PRGMSLG LP+ D S + Q L+ +DV
Sbjct: 570 LTAYHEAGHALVAYFSPSSMPLYKITIMPRGMSLGSTHFLPEMDMVSKNYVQYLSDIDVS 629
Query: 509 MGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVT--HNYDDNGKSM 566
MGG+VAEELI+GE++VTSG S+DL AT+ A +VT++G SK++G V NYD S+
Sbjct: 630 MGGKVAEELIYGEDKVTSGISADLASATRTAFTLVTRFGYSKKLGNVDLYANYD----SL 685
Query: 567 STETRLLIEKEVRNFLDRAYNNAKTILT 594
S+ET+ IE EVR ++ A A ILT
Sbjct: 686 SSETKQEIEAEVRRLVEEARQRATNILT 713
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 243/525 (46%), Positives = 342/525 (65%)
Query: 83 DRLDDSE-LLKTLQKG--IANSARDEESIGGISAFKNVGKPTKDGV-LGTASAPIHMVAA 138
+RL +++ + + KG + + D ES+ + KN+ + +D G A + A
Sbjct: 223 ERLAETQNIAPSFVKGFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQAL 282
Query: 139 EGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFS 194
+ L RT R I L LL+ G+ L+++ +S GL V P N F
Sbjct: 283 TQ-KTNDSLRRT-RLI-LFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFE 339
Query: 195 DVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVP 254
VKGV+EAKQEL+E+V +L++P++FT T+LARA+AGEA VP
Sbjct: 340 HVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 399
Query: 255 FFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMT 313
F+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T
Sbjct: 400 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT 459
Query: 314 LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESH 373
+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ +
Sbjct: 460 INQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWY 519
Query: 374 MSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMM 433
++K+ VD IIARGT GFSGA+L NLVN VTM +LE++KDKI+M
Sbjct: 520 LNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 579
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDE 493
G ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D
Sbjct: 580 GPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 639
Query: 494 TSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG 553
+ +R Q+LA++DV MGGRVAEELIFG + +T+GASSD ATK+A+ MVTK+GMS+++G
Sbjct: 640 WNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG 699
Query: 554 VVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
V+T Y D GK +S ET+ IE+E+R L +Y AK IL H+K
Sbjct: 700 VMT--YSDTGK-LSPETQSAIEQEIRILLRDSYERAKHILKTHAK 741
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 213/423 (50%), Positives = 292/423 (69%)
Query: 178 GLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXX 237
GL V P N F VKGV+EAKQEL+E+V +L++P++FT
Sbjct: 323 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 382
Query: 238 XXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDA 297
T+LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D+
Sbjct: 383 TGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDS 442
Query: 298 IGGSRNPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
+GG R Y + T+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD +
Sbjct: 443 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 502
Query: 357 VVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
VP PDV+GR +I++ +++K+ VD IIARGT GFSGA+L NLVN
Sbjct: 503 TVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 562
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
VTM +LE++KDKI+MG ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+
Sbjct: 563 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 622
Query: 477 PRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQAT 536
PRG +LG V+ LP+ D + +R Q+LA++DV MGGRVAEELIFG + +T+GASSD AT
Sbjct: 623 PRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNAT 682
Query: 537 KLARAMVTKYGMSKEVGVVTHNYDDNGK-SMSTETRLLIEKEV--RNFLDRAYNNAKTIL 593
K+A+ MVTK+GMS+++GV+T Y D GK S T++ + E + R+ +RA + KT
Sbjct: 683 KIAKRMVTKFGMSEKLGVMT--YSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHA 740
Query: 594 TMH 596
H
Sbjct: 741 KEH 743
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 243/525 (46%), Positives = 342/525 (65%)
Query: 83 DRLDDSE-LLKTLQKG--IANSARDEESIGGISAFKNVGKPTKDGV-LGTASAPIHMVAA 138
+RL +++ + + KG + + D ES+ + KN+ + +D G A + A
Sbjct: 165 ERLAEAQNIAPSFVKGFLLRDRGTDLESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQAL 224
Query: 139 EGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFS 194
+ L RT R I L LL+ G+ L+++ +S GL V P N F
Sbjct: 225 TQ-KTNDSLRRT-RLI-LFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFE 281
Query: 195 DVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVP 254
VKGV+EAKQEL+E+V +L++P++FT T+LARA+AGEA VP
Sbjct: 282 HVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 341
Query: 255 FFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMT 313
F+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T
Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT 401
Query: 314 LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESH 373
+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ +
Sbjct: 402 INQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWY 461
Query: 374 MSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMM 433
++K+ VD IIARGT GFSGA+L NLVN VTM +LE++KDKI+M
Sbjct: 462 LNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDE 493
G ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D
Sbjct: 522 GPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
Query: 494 TSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG 553
+ +R Q+LA++DV MGGRVAEELIFG + +T+GASSD ATK+A+ MVTK+GMS+++G
Sbjct: 582 WNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG 641
Query: 554 VVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
V+T Y D GK +S ET+ IE+E+R L +Y AK IL H+K
Sbjct: 642 VMT--YSDTGK-LSPETQSAIEQEIRILLRESYERAKHILKTHAK 683
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 213/423 (50%), Positives = 291/423 (68%)
Query: 178 GLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXX 237
GL V P N F VKGV+EAKQEL+E+V +L++P++FT
Sbjct: 265 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPG 324
Query: 238 XXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDA 297
T+LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D+
Sbjct: 325 TGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDS 384
Query: 298 IGGSRNPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
+GG R Y + T+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD +
Sbjct: 385 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 444
Query: 357 VVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
VP PDV+GR +I++ +++K+ VD IIARGT GFSGA+L NLVN
Sbjct: 445 TVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
VTM +LE++KDKI+MG ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 564
Query: 477 PRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQAT 536
PRG +LG V+ LP+ D + +R Q+LA++DV MGGRVAEELIFG + +T+GASSD AT
Sbjct: 565 PRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNAT 624
Query: 537 KLARAMVTKYGMSKEVGVVTHNYDDNGK-SMSTETRLLIEKEV--RNFLDRAYNNAKTIL 593
K+A+ MVTK+GMS+++GV+T Y D GK S T++ + E + R +RA + KT
Sbjct: 625 KIAKRMVTKFGMSEKLGVMT--YSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHA 682
Query: 594 TMH 596
H
Sbjct: 683 KEH 685
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 243/525 (46%), Positives = 342/525 (65%)
Query: 83 DRLDDSE-LLKTLQKG--IANSARDEESIGGISAFKNVGKPTKDGV-LGTASAPIHMVAA 138
+RL +++ + + KG + + D ES+ + KN+ + +D G A + A
Sbjct: 199 ERLAETQHIAPSFVKGFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQAL 258
Query: 139 EGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFS 194
+ L RT R I L LL+ G+ L+++ +S GL V P N F
Sbjct: 259 MQ-KTNDSLRRT-RLI-LFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFE 315
Query: 195 DVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVP 254
VKGV+EAKQEL+E+V +L++P++FT T+LARA+AGEA VP
Sbjct: 316 HVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 375
Query: 255 FFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMT 313
F+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T
Sbjct: 376 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT 435
Query: 314 LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESH 373
+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ +
Sbjct: 436 INQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWY 495
Query: 374 MSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMM 433
++K+ VD IIARGT GFSGA+L NLVN VTM +LE++KDKI+M
Sbjct: 496 LNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 555
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDE 493
G ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D
Sbjct: 556 GPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 615
Query: 494 TSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG 553
+ +R Q+LA++DV MGGRVAEELIFG + +T+GASSD ATK+A+ MVTK+GMS+++G
Sbjct: 616 WNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG 675
Query: 554 VVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
V+T Y D GK +S ET+ IE+E+R L +Y AK IL H+K
Sbjct: 676 VMT--YSDTGK-LSPETQSAIEQEIRILLRDSYERAKHILKTHAK 717
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 213/423 (50%), Positives = 292/423 (69%)
Query: 178 GLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXX 237
GL V P N F VKGV+EAKQEL+E+V +L++P++FT
Sbjct: 299 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPG 358
Query: 238 XXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDA 297
T+LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D+
Sbjct: 359 TGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDS 418
Query: 298 IGGSRNPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
+GG R Y + T+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD +
Sbjct: 419 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 478
Query: 357 VVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
VP PDV+GR +I++ +++K+ VD IIARGT GFSGA+L NLVN
Sbjct: 479 TVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 538
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
VTM +LE++KDKI+MG ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+
Sbjct: 539 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 598
Query: 477 PRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQAT 536
PRG +LG V+ LP+ D + +R Q+LA++DV MGGRVAEELIFG + +T+GASSD AT
Sbjct: 599 PRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNAT 658
Query: 537 KLARAMVTKYGMSKEVGVVTHNYDDNGK-SMSTETRLLIEKEV--RNFLDRAYNNAKTIL 593
K+A+ MVTK+GMS+++GV+T Y D GK S T++ + E + R+ +RA + KT
Sbjct: 659 KIAKRMVTKFGMSEKLGVMT--YSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHA 716
Query: 594 TMH 596
H
Sbjct: 717 KEH 719
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 243/525 (46%), Positives = 342/525 (65%)
Query: 83 DRLDDSE-LLKTLQKG--IANSARDEESIGGISAFKNVGKPTKDGV-LGTASAPIHMVAA 138
+RL +++ + + KG + + D ES+ + KN+ + +D G A + A
Sbjct: 165 ERLVEAQNIAPSFVKGFLLRDRGTDLESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQAL 224
Query: 139 EGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFS 194
+ L RT R I L LL+ G+ L+++ +S GL V P N F
Sbjct: 225 TQ-KTNDSLRRT-RLI-LFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFE 281
Query: 195 DVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVP 254
VKGV+EAKQEL+E+V +L++P++FT T+LARA+AGEA VP
Sbjct: 282 HVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 341
Query: 255 FFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMT 313
F+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T
Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT 401
Query: 314 LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESH 373
+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ +
Sbjct: 402 INQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWY 461
Query: 374 MSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMM 433
++K+ VD IIARGT GFSGA+L NLVN VTM +LE++KDKI+M
Sbjct: 462 LNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDE 493
G ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D
Sbjct: 522 GPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
Query: 494 TSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG 553
+ +R Q+LA++DV MGGRVAEELIFG + +T+GASSD ATK+A+ MVTK+GMS+++G
Sbjct: 582 WNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG 641
Query: 554 VVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
V+T Y D GK +S ET+ IE+E+R L +Y AK IL H+K
Sbjct: 642 VMT--YSDTGK-LSPETQSAIEQEIRILLRESYERAKHILKTHAK 683
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 213/423 (50%), Positives = 291/423 (68%)
Query: 178 GLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXX 237
GL V P N F VKGV+EAKQEL+E+V +L++P++FT
Sbjct: 265 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPG 324
Query: 238 XXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDA 297
T+LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D+
Sbjct: 325 TGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDS 384
Query: 298 IGGSRNPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
+GG R Y + T+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD +
Sbjct: 385 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 444
Query: 357 VVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
VP PDV+GR +I++ +++K+ VD IIARGT GFSGA+L NLVN
Sbjct: 445 TVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
VTM +LE++KDKI+MG ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 564
Query: 477 PRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQAT 536
PRG +LG V+ LP+ D + +R Q+LA++DV MGGRVAEELIFG + +T+GASSD AT
Sbjct: 565 PRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNAT 624
Query: 537 KLARAMVTKYGMSKEVGVVTHNYDDNGK-SMSTETRLLIEKEV--RNFLDRAYNNAKTIL 593
K+A+ MVTK+GMS+++GV+T Y D GK S T++ + E + R +RA + KT
Sbjct: 625 KIAKRMVTKFGMSEKLGVMT--YSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHA 682
Query: 594 TMH 596
H
Sbjct: 683 KEH 685
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 242/525 (46%), Positives = 340/525 (64%)
Query: 83 DRLDDSE-LLKTLQKG--IANSARDEESIGGISAFKNVGKPTKDGV-LGTASAPIHMVAA 138
+RL +++ + KG + + D ES+ + KN+ + +D G A + A
Sbjct: 218 ERLAETQHTAPSFVKGFLLRDRGSDIESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQAL 277
Query: 139 EGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFS 194
+ L RT R I LL+ G+ L+++ +S GL V P N F
Sbjct: 278 TQ-KTNDSLRRT-RLIVF-ILLVVGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFE 334
Query: 195 DVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVP 254
VKGV+EAKQEL+E+V +L++P++FT T+LARA+AGEA VP
Sbjct: 335 HVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 394
Query: 255 FFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMT 313
F+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T
Sbjct: 395 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT 454
Query: 314 LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESH 373
+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ +
Sbjct: 455 INQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWY 514
Query: 374 MSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMM 433
++K+ VD IIARGT GFSGA+L NLVN VTM +LE++KDKI+M
Sbjct: 515 LNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 574
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDE 493
G ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D
Sbjct: 575 GPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 634
Query: 494 TSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG 553
+ +R Q+LA++DV MGGRVAEELIFG + +T+GASSD ATK+A+ MVTK+GMS+++G
Sbjct: 635 WNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG 694
Query: 554 VVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
V+T Y D GK +S ET+ IE+E+R L +Y AK IL H+K
Sbjct: 695 VMT--YSDTGK-LSPETQSAIEQEIRILLRDSYERAKHILKTHAK 736
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 213/423 (50%), Positives = 292/423 (69%)
Query: 178 GLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXX 237
GL V P N F VKGV+EAKQEL+E+V +L++P++FT
Sbjct: 318 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPG 377
Query: 238 XXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDA 297
T+LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D+
Sbjct: 378 TGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDS 437
Query: 298 IGGSRNPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
+GG R Y + T+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD +
Sbjct: 438 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 497
Query: 357 VVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
VP PDV+GR +I++ +++K+ VD IIARGT GFSGA+L NLVN
Sbjct: 498 TVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 557
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
VTM +LE++KDKI+MG ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+
Sbjct: 558 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 617
Query: 477 PRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQAT 536
PRG +LG V+ LP+ D + +R Q+LA++DV MGGRVAEELIFG + +T+GASSD AT
Sbjct: 618 PRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNAT 677
Query: 537 KLARAMVTKYGMSKEVGVVTHNYDDNGK-SMSTETRLLIEKEV--RNFLDRAYNNAKTIL 593
K+A+ MVTK+GMS+++GV+T Y D GK S T++ + E + R+ +RA + KT
Sbjct: 678 KIAKRMVTKFGMSEKLGVMT--YSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHA 735
Query: 594 TMH 596
H
Sbjct: 736 KEH 738
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 1090 (388.8 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 214/457 (46%), Positives = 314/457 (68%)
Query: 144 KEQLWRTIRTIALGFLLISGVGALIED---RGISKGLGL-HEEVQPSLESNTKFSDVKGV 199
K+ LW +++ +GFL++ G++ + + + KG+G+ ++++ P F+DVKG
Sbjct: 201 KKGLWNLLKS-TIGFLILVAAGSVYMEGVSQNVQKGIGVSNKKIIPVENVKVTFADVKGC 259
Query: 200 DEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCS 259
DE KQELEEI+ YL++ +FT+ T++ARAIAGEA VPF S
Sbjct: 260 DEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQAS 319
Query: 260 GSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLV 319
GSEFEEMFVGVGARR+R+LF AAKK +PCI+FIDEIDA+G R+ +D ++MTLNQLLV
Sbjct: 320 GSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRDNSAVRMTLNQLLV 379
Query: 320 ELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLK 379
ELDGF+QNEGI+VI ATNFP+SLDKALVRPGR D+ IVVP PD++GR +I++ + +K++
Sbjct: 380 ELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNKIVL 439
Query: 380 ADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKS 439
+ DVDL +++R T G +GADL N++NI V M +E A D++++G +RKS
Sbjct: 440 SKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVGLQRKS 499
Query: 440 AVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRK 499
+++E + +TA+HEGGH LV +T G+ PVHKATI+PRGMSLG+ ++P D+ S K
Sbjct: 500 P-LNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPRGMSLGVTWKIPISDKYSQKIK 558
Query: 500 QMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNY 559
+ + +D+ MGG V+EE+IFG+N VT+G SSDLQ+AT +A+++V YG+ ++
Sbjct: 559 DVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSLVMNYGVGINEDNISMFL 618
Query: 560 DDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMH 596
D +++S E ++ I+K ++ L +YN AK +L H
Sbjct: 619 HDK-QNISEEMKIKIDKSIQRILLDSYNRAKNVLNQH 654
Score = 55 (24.4 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 50 NDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSEL 90
++P VI+ +E+ + ++S EY+KALV ++L + L
Sbjct: 72 HNPNEVIKHYENANYI-KDESITKEYIKALVYTNKLKYTNL 111
Score = 39 (18.8 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 44 RELYRRNDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSELLKTL 94
RE+ + + +I F + ++H+ + Y A D E +K L
Sbjct: 50 REVRNKPNDNFLILQFYKEANVHNPNEVIKHYENANYIKDESITKEYIKAL 100
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 1090 (388.8 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 214/457 (46%), Positives = 314/457 (68%)
Query: 144 KEQLWRTIRTIALGFLLISGVGALIED---RGISKGLGL-HEEVQPSLESNTKFSDVKGV 199
K+ LW +++ +GFL++ G++ + + + KG+G+ ++++ P F+DVKG
Sbjct: 201 KKGLWNLLKS-TIGFLILVAAGSVYMEGVSQNVQKGIGVSNKKIIPVENVKVTFADVKGC 259
Query: 200 DEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCS 259
DE KQELEEI+ YL++ +FT+ T++ARAIAGEA VPF S
Sbjct: 260 DEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQAS 319
Query: 260 GSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLV 319
GSEFEEMFVGVGARR+R+LF AAKK +PCI+FIDEIDA+G R+ +D ++MTLNQLLV
Sbjct: 320 GSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRDNSAVRMTLNQLLV 379
Query: 320 ELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLK 379
ELDGF+QNEGI+VI ATNFP+SLDKALVRPGR D+ IVVP PD++GR +I++ + +K++
Sbjct: 380 ELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNKIVL 439
Query: 380 ADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKS 439
+ DVDL +++R T G +GADL N++NI V M +E A D++++G +RKS
Sbjct: 440 SKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVGLQRKS 499
Query: 440 AVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRK 499
+++E + +TA+HEGGH LV +T G+ PVHKATI+PRGMSLG+ ++P D+ S K
Sbjct: 500 P-LNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPRGMSLGVTWKIPISDKYSQKIK 558
Query: 500 QMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNY 559
+ + +D+ MGG V+EE+IFG+N VT+G SSDLQ+AT +A+++V YG+ ++
Sbjct: 559 DVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSLVMNYGVGINEDNISMFL 618
Query: 560 DDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMH 596
D +++S E ++ I+K ++ L +YN AK +L H
Sbjct: 619 HDK-QNISEEMKIKIDKSIQRILLDSYNRAKNVLNQH 654
Score = 55 (24.4 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 50 NDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSEL 90
++P VI+ +E+ + ++S EY+KALV ++L + L
Sbjct: 72 HNPNEVIKHYENANYI-KDESITKEYIKALVYTNKLKYTNL 111
Score = 39 (18.8 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 44 RELYRRNDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSELLKTL 94
RE+ + + +I F + ++H+ + Y A D E +K L
Sbjct: 50 REVRNKPNDNFLILQFYKEANVHNPNEVIKHYENANYIKDESITKEYIKAL 100
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 242/527 (45%), Positives = 340/527 (64%)
Query: 83 DRLDDSE-LLKTLQKG--IANSARDEESIGGISAFKNVGKPTKDGV-LGTASAPIHMVAA 138
+RL +++ + KG + + D ES+ + KN+ + +D G A + A
Sbjct: 165 ERLAETQHTAPSFVKGFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQAL 224
Query: 139 EGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFS 194
+ L RT R I LL+ G+ L+++ +S GL V P N F
Sbjct: 225 TQ-KTNDSLRRT-RLIVF-ILLVVGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFE 281
Query: 195 DVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVP 254
VKGV+EAKQEL+E+V +L++P++FT T+LARA+AGEA VP
Sbjct: 282 HVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 341
Query: 255 FFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMT 313
F+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T
Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT 401
Query: 314 LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESH 373
+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ +
Sbjct: 402 INQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWY 461
Query: 374 MSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMM 433
++K+ VD IIARGT GFSGA+L NLVN VTM +LE++KDKI+M
Sbjct: 462 LNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDE 493
G ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D
Sbjct: 522 GPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
Query: 494 TSISRKQMLARLDVCMGGRVAEELIFGENEVTSG--ASSDLQQATKLARAMVTKYGMSKE 551
+ +R Q+LA++DV MGGRVAEELIFG + +T+G ASSD ATK+A+ MVTK+GMS++
Sbjct: 582 WNETRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSDFDNATKIAKRMVTKFGMSEK 641
Query: 552 VGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
+GV+T Y D GK +S ET+ IE+E+R L +Y AK IL H+K
Sbjct: 642 LGVMT--YSDTGK-LSPETQSAIEQEIRILLRDSYERAKHILKTHAK 685
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 242/525 (46%), Positives = 340/525 (64%)
Query: 83 DRLDDSE-LLKTLQKG--IANSARDEESIGGISAFKNVGKPTKDGV-LGTASAPIHMVAA 138
+RL +++ + + KG + + D ES+ + KN+ + +D G A + A
Sbjct: 165 ERLAEAQNIAPSFVKGFLLRDRGTDLESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQAL 224
Query: 139 EGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFS 194
+ L RT R I L LL+ G+ L+++ +S GL V P N F
Sbjct: 225 TQ-KTNDSLRRT-RLI-LFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFE 281
Query: 195 DVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVP 254
VKGV+EAKQEL+E+V +L++P++FT T+LARA+AGEA VP
Sbjct: 282 HVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 341
Query: 255 FFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMT 313
F+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T
Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPMHPYSRQT 401
Query: 314 LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESH 373
+ QLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ +
Sbjct: 402 IIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWY 461
Query: 374 MSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMM 433
++K+ VD IIARGT GFSGA+L NLVN VTM +LE++KDKI+M
Sbjct: 462 LNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDE 493
G ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D
Sbjct: 522 GPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
Query: 494 TSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG 553
+ R Q+LA++DV MGGRVAEELIFG + +T+GASSD ATK+A+ MVTK+GMS+++G
Sbjct: 582 WNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG 641
Query: 554 VVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
V+T Y D GK +S ET+ IE+E+R L +Y AK IL H+K
Sbjct: 642 VMT--YSDTGK-LSPETQSAIEQEIRILLRESYERAKHILKTHAK 683
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 212/423 (50%), Positives = 289/423 (68%)
Query: 178 GLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXX 237
GL V P N F VKGV+EAKQEL+E+V +L++P++FT
Sbjct: 265 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPG 324
Query: 238 XXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDA 297
T+LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D+
Sbjct: 325 TGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDS 384
Query: 298 IGGSRNPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
+GG R Y + T+ QLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD +
Sbjct: 385 VGGKRIEFPMHPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 444
Query: 357 VVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
VP PDV+GR +I++ +++K+ VD IIARGT GFSGA+L NLVN
Sbjct: 445 TVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
VTM +LE++KDKI+MG ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 564
Query: 477 PRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQAT 536
PRG +LG V+ LP+ D + R Q+LA++DV MGGRVAEELIFG + +T+GASSD AT
Sbjct: 565 PRGPTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNAT 624
Query: 537 KLARAMVTKYGMSKEVGVVTHNYDDNGK-SMSTETRLLIEKEV--RNFLDRAYNNAKTIL 593
K+A+ MVTK+GMS+++GV+T Y D GK S T++ + E + R +RA + KT
Sbjct: 625 KIAKRMVTKFGMSEKLGVMT--YSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHA 682
Query: 594 TMH 596
H
Sbjct: 683 KEH 685
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
Identities = 227/435 (52%), Positives = 293/435 (67%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G++EAK+EL EIV +L+ ++FT+ T+LARAIAGEA
Sbjct: 157 FDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEAN 216
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN-----PKDQ 307
VPFFS SGS+F EMFVGVGA RVRD+F KK +PCIIF+DEIDA+G R D+
Sbjct: 217 VPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGNDE 276
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ + TLNQLLVE+DGF+ NEG+++IAATN P+ LD AL+RPGRFDR + + PD+ GR
Sbjct: 277 R--EQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGRE 334
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYA 427
+I+ H KV A DVDL +IARGTPGFSGADLANLVN VTM D EYA
Sbjct: 335 KIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEYA 394
Query: 428 KDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQ 487
+DK+MMG+ERKS V+ +E R+LTA+HE GHA+VA H + P+HKATI+PRG SLG+V +
Sbjct: 395 RDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRGRSLGLVMR 454
Query: 488 LPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYG 547
LP+ D S +R++MLA L V MGGR AEELIFG N+VTSGASSD++QAT LA++MV K+G
Sbjct: 455 LPETDRVSHTREKMLADLTVAMGGRAAEELIFGYNKVTSGASSDIKQATDLAKSMVMKWG 514
Query: 548 MSKEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXX 607
MS VG + H+ D+ + +ST LI+ EV++ + A AK +LT HS
Sbjct: 515 MSDSVGPLYHS-DEAHERISTNLANLIDDEVKSIVSTALAEAKDVLTKHSDALHAIAANL 573
Query: 608 XXXXXXSGSQIKALL 622
+G I ++
Sbjct: 574 LEFETLTGDDIADII 588
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
Identities = 227/435 (52%), Positives = 293/435 (67%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G++EAK+EL EIV +L+ ++FT+ T+LARAIAGEA
Sbjct: 157 FDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEAN 216
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN-----PKDQ 307
VPFFS SGS+F EMFVGVGA RVRD+F KK +PCIIF+DEIDA+G R D+
Sbjct: 217 VPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGNDE 276
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ + TLNQLLVE+DGF+ NEG+++IAATN P+ LD AL+RPGRFDR + + PD+ GR
Sbjct: 277 R--EQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGRE 334
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYA 427
+I+ H KV A DVDL +IARGTPGFSGADLANLVN VTM D EYA
Sbjct: 335 KIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEYA 394
Query: 428 KDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQ 487
+DK+MMG+ERKS V+ +E R+LTA+HE GHA+VA H + P+HKATI+PRG SLG+V +
Sbjct: 395 RDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRGRSLGLVMR 454
Query: 488 LPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYG 547
LP+ D S +R++MLA L V MGGR AEELIFG N+VTSGASSD++QAT LA++MV K+G
Sbjct: 455 LPETDRVSHTREKMLADLTVAMGGRAAEELIFGYNKVTSGASSDIKQATDLAKSMVMKWG 514
Query: 548 MSKEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXX 607
MS VG + H+ D+ + +ST LI+ EV++ + A AK +LT HS
Sbjct: 515 MSDSVGPLYHS-DEAHERISTNLANLIDDEVKSIVSTALAEAKDVLTKHSDALHAIAANL 573
Query: 608 XXXXXXSGSQIKALL 622
+G I ++
Sbjct: 574 LEFETLTGDDIADII 588
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 216/417 (51%), Positives = 291/417 (69%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
V P N F VKGV+EAKQEL+E+V +L++P +FT T+
Sbjct: 267 VDPIQLKNVTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTL 326
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R LF AK +PC+IFIDE+D++GG R
Sbjct: 327 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKR 386
Query: 303 NPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNP 361
Y + T+NQLL E+DGFK NEG+++I ATNFPE+LD AL+RPGRFD + VP P
Sbjct: 387 IESPMHPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKP 446
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTM 421
DV GR +I++ +++K+ VD IIARGT GFSGA+L NLVN VTM
Sbjct: 447 DVRGRTEILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTM 506
Query: 422 ADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMS 481
+LE++KDKI+MG ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+ RG +
Sbjct: 507 KELEFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTT 566
Query: 482 LGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARA 541
LG V+ LP+ D S +R Q+LA++DVCMGGR AEELIFG + +T+GASSD ATK+A+
Sbjct: 567 LGHVSLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKL 626
Query: 542 MVTKYGMSKEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
MVT++GMS+++GV+T Y D GK +S ET+ IE+EVR L +Y AK IL H+K
Sbjct: 627 MVTRFGMSEKLGVMT--YTDTGK-VSPETQSAIEQEVRTLLRDSYERAKNILKTHAK 680
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 216/417 (51%), Positives = 291/417 (69%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
V P N F VKGV+EAKQEL+E+V +L++P +FT T+
Sbjct: 272 VDPIQLKNVTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTL 331
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R LF AK +PC+IFIDE+D++GG R
Sbjct: 332 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKR 391
Query: 303 NPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNP 361
Y + T+NQLL E+DGFK NEG+++I ATNFPE+LD AL+RPGRFD + VP P
Sbjct: 392 IESPMHPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKP 451
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTM 421
DV GR +I++ +++K+ VD IIARGT GFSGA+L NLVN VTM
Sbjct: 452 DVRGRTEILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTM 511
Query: 422 ADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMS 481
+LE++KDKI+MG ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+ RG +
Sbjct: 512 KELEFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTT 571
Query: 482 LGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARA 541
LG V+ LP+ D S +R Q+LA++DVCMGGR AEELIFG + +T+GASSD ATK+A+
Sbjct: 572 LGHVSLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKL 631
Query: 542 MVTKYGMSKEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
MVT++GMS+++GV+T Y D GK +S ET+ IE+EVR L +Y AK IL H+K
Sbjct: 632 MVTRFGMSEKLGVMT--YTDTGK-VSPETQSAIEQEVRTLLRDSYERAKNILKTHAK 685
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 225/435 (51%), Positives = 297/435 (68%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F+DV G+DEAK+EL EIV +L+ +RF + T+LARAIAGEA
Sbjct: 155 FNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEAN 214
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN-----PKDQ 307
VPFFS SGS+F EMFVGVGA RVRD+F KK +PCIIFIDEIDA+G R D+
Sbjct: 215 VPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDE 274
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ + TLNQLLVE+DGF+ NEG+I+IAATN P+ LD AL+RPGRFDR + + PD+ GR
Sbjct: 275 R--EQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGRE 332
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYA 427
+I+ H+ KV A DV++ IARGTPGFSGADLANLVN VTM+D EYA
Sbjct: 333 KIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYA 392
Query: 428 KDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQ 487
+DK+MMG+ERKS ++++E R+LTA+HE GHA++A T+ + P+HKATI+PRG SLG+V +
Sbjct: 393 RDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEASDPIHKATIIPRGRSLGLVMR 452
Query: 488 LPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYG 547
LP+ D S +R++M+A L V MGGR AEELIFG ++VTSGASSD++QAT LA+AMV K+G
Sbjct: 453 LPESDRVSHTREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDLAKAMVMKWG 512
Query: 548 MSKEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXX 607
MS +VG + HN DD ++S LI++EV+ + A AK++L H +
Sbjct: 513 MSDKVGPLYHN-DDKNDTISNNLANLIDEEVKLIVTSALERAKSLLNEHLESLHIVAKNL 571
Query: 608 XXXXXXSGSQIKALL 622
+G IK ++
Sbjct: 572 LEFETLTGEDIKNII 586
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 225/435 (51%), Positives = 297/435 (68%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F+DV G+DEAK+EL EIV +L+ +RF + T+LARAIAGEA
Sbjct: 155 FNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEAN 214
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN-----PKDQ 307
VPFFS SGS+F EMFVGVGA RVRD+F KK +PCIIFIDEIDA+G R D+
Sbjct: 215 VPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDE 274
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ + TLNQLLVE+DGF+ NEG+I+IAATN P+ LD AL+RPGRFDR + + PD+ GR
Sbjct: 275 R--EQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGRE 332
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYA 427
+I+ H+ KV A DV++ IARGTPGFSGADLANLVN VTM+D EYA
Sbjct: 333 KIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYA 392
Query: 428 KDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQ 487
+DK+MMG+ERKS ++++E R+LTA+HE GHA++A T+ + P+HKATI+PRG SLG+V +
Sbjct: 393 RDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEASDPIHKATIIPRGRSLGLVMR 452
Query: 488 LPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYG 547
LP+ D S +R++M+A L V MGGR AEELIFG ++VTSGASSD++QAT LA+AMV K+G
Sbjct: 453 LPESDRVSHTREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDLAKAMVMKWG 512
Query: 548 MSKEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXX 607
MS +VG + HN DD ++S LI++EV+ + A AK++L H +
Sbjct: 513 MSDKVGPLYHN-DDKNDTISNNLANLIDEEVKLIVTSALERAKSLLNEHLESLHIVAKNL 571
Query: 608 XXXXXXSGSQIKALL 622
+G IK ++
Sbjct: 572 LEFETLTGEDIKNII 586
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 227/463 (49%), Positives = 303/463 (65%)
Query: 162 SGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTR 221
SG G+ + GL V P N F VKGV+EAK EL+++V +LR+P++FT
Sbjct: 263 SGKGSFSDTVRFRTTSGLDSSVDPVQMKNITFEHVKGVEEAKNELQDVVEFLRNPQKFTV 322
Query: 222 XXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSA 281
T+LARA+AGEA VPF+ SGSEF+EMFVGVGA R+R+LF
Sbjct: 323 LGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFKE 382
Query: 282 AKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPE 340
AK +PC+IFIDE+D++GG R Y + T+NQLL E+DGFK NEG+IVI ATNF E
Sbjct: 383 AKASAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIVIGATNFAE 442
Query: 341 SLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADD-VDLMIIARGTPGFSGAD 399
+LD ALVRPGRFD + VP PDV+GR +I+E ++ K+ K D +D IIARGT GFSGA+
Sbjct: 443 ALDNALVRPGRFDMQVTVPIPDVKGRTEILEWYLKKI-KVDSAIDAEIIARGTVGFSGAE 501
Query: 400 LANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHAL 459
L NLVN VTM +L++AKDKI+MG ER+S I ++ +TA+HE GHA+
Sbjct: 502 LENLVNQAALKAAADGKDLVTMKELKFAKDKILMGPERRSVEIDKRNKTITAYHESGHAI 561
Query: 460 VAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIF 519
VA +T A+P++KATI+PRG SLG V+ LP+ D S +R Q+LA++DV MGGRVAEEL+F
Sbjct: 562 VAYYTKDAMPINKATIMPRGPSLGHVSLLPENDRWSETRAQLLAQMDVSMGGRVAEELVF 621
Query: 520 GENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNGKSMSTETRLLIEKEVR 579
G +++TSGASSD ATK+A+ MVT++GMS ++GV+T Y D K S ETR +E+E+R
Sbjct: 622 GNDQITSGASSDFDGATKIAQMMVTRFGMSDKLGVMT--YSDLTKH-SPETRAAVEQEIR 678
Query: 580 NFLDRAYNNAKTILTMHSKXXXXXXXXXXXXXXXSGSQIKALL 622
L +Y AK IL +SK + +I+ +L
Sbjct: 679 VLLQSSYERAKKILKTYSKEHKLLADALLTYETLNAKEIQMIL 721
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 231/461 (50%), Positives = 309/461 (67%)
Query: 144 KEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFSDVKGV 199
+E L RT R I L LL+ G+ L + +S GL V P N F VKGV
Sbjct: 236 QESLRRT-RLILLVLLLV-GLYGLSKTPFLSVRFRTTSGLDSAVDPVQMKNVTFEHVKGV 293
Query: 200 DEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCS 259
+EAK EL+E+V +LR+P++FT T+LARA+AGEA VPF+ S
Sbjct: 294 EEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYAS 353
Query: 260 GSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMTLNQLL 318
GSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T+NQLL
Sbjct: 354 GSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLL 413
Query: 319 VELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVL 378
E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ ++ K+
Sbjct: 414 AEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLKKI- 472
Query: 379 KADD-VDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSER 437
K D V+ +IARGT GFSGA+L NLVN VTM +LE+AKDKI+MG ER
Sbjct: 473 KVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFAKDKILMGPER 532
Query: 438 KSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSIS 497
+SA I ++++TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D S +
Sbjct: 533 RSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSMLPENDRWSET 592
Query: 498 RKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTH 557
R Q+LA++DV MGGRVAEELIFG +T+GASSD ATK+A+ MVT++GMS+++GV+T
Sbjct: 593 RAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSATKIAKMMVTRFGMSEKLGVMT- 651
Query: 558 NYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
Y D K S ET+ IE EVR L +Y AK +L +K
Sbjct: 652 -YSDLTKQ-SPETQAAIEHEVRILLRDSYERAKALLKSRAK 690
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
Identities = 236/509 (46%), Positives = 333/509 (65%)
Query: 83 DRLDDSE-LLKTLQKG--IANSARDEESIGGISAFKNVGKPTKDGV-LGTASAPIHMVAA 138
+RL +++ + + KG + + D ES+ + KN+ + +D G A + A
Sbjct: 165 ERLAETQHIAPSFVKGFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQAL 224
Query: 139 EGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGL----GLHEEVQPSLESNTKFS 194
+ L RT R I L LL+ G+ L+++ +S GL V P N F
Sbjct: 225 MQ-KTNDSLRRT-RLI-LFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFE 281
Query: 195 DVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVP 254
VKGV+EAKQEL+E+V +L++P++FT T+LARA+AGEA VP
Sbjct: 282 HVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 341
Query: 255 FFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ-YMKMT 313
F+ SGSEF+EMFVGVGA R+R+LF AK +PC+IFIDE+D++GG R Y + T
Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT 401
Query: 314 LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESH 373
+NQLL E+DGFK NEG+I+I ATNFPE+LD AL+RPGRFD + VP PDV+GR +I++ +
Sbjct: 402 INQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWY 461
Query: 374 MSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMM 433
++K+ VD IIARGT GFSGA+L NLVN VTM +LE++KDKI+M
Sbjct: 462 LNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDE 493
G ER+S I ++++ +TA+HE GHA++A +T A+P++KATI+PRG +LG V+ LP+ D
Sbjct: 522 GPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
Query: 494 TSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG 553
+ +R Q+LA++DV MGGRVAEELIFG + +T+GASSD ATK+A+ MVTK+GMS+++G
Sbjct: 582 WNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG 641
Query: 554 VVTHNYDDNGKSMSTETRLLIEKEVRNFL 582
V+T Y D GK +S ET+ IE+E+R L
Sbjct: 642 VMT--YSDTGK-LSPETQSAIEQEIRILL 667
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 216/435 (49%), Positives = 288/435 (66%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G+DEAK+EL EIV +LR+PK+F + T+LA+AIAGEA
Sbjct: 156 FHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAK 215
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQQY 309
VPFFS SGS+F EMFVGVGA RVRD+F KK +PC+IFIDEIDA+G R
Sbjct: 216 VPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDE 275
Query: 310 MKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI 369
+ TLNQLLVE+DGF+ NEG+I+IAATN P+ LD AL+RPGRFDR I + PD+ GR++I
Sbjct: 276 REQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKI 335
Query: 370 MESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKD 429
+E H+ K+ A +V++ IIARGTPGFSGADLANLVN VT D EYA+D
Sbjct: 336 LEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEYARD 395
Query: 430 KIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLP 489
KI+MG ERKS V+ +E + LTA+HE GHA+ ++ + + P+HKATI+PRG +LG+V +LP
Sbjct: 396 KILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPIHKATIIPRGRALGLVMRLP 455
Query: 490 DKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMS 549
+ D S +R +M A L V MGGR AE++IFG+++ TSGA+SD++QAT LAR+MVTK+GMS
Sbjct: 456 EHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQATHLARSMVTKWGMS 515
Query: 550 KEVGVVTHNY--DDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXX 607
++VG + + D N +S E LI+ EV+ + A A IL + +
Sbjct: 516 EKVGPLLYGEQNDPNNHILSIEMSNLIDSEVKQLVTDALKEATKILNENIESLHRVAKAL 575
Query: 608 XXXXXXSGSQIKALL 622
+G ++ LL
Sbjct: 576 LEYETLTGQELSDLL 590
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 239/574 (41%), Positives = 342/574 (59%)
Query: 35 DEASEVAHLRELYRRNDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSEL---- 90
+ E+A+ +EL D + +++ FES + SN+ + Y KALV +++ + L
Sbjct: 130 ENIQEMAY-KELIEMGDYDTIVKRFESL-AFSSNEECVRYYFKALVYSGKINKANLGMTK 187
Query: 91 LKTLQKGIANSARD----EESIGGISAFKNVGKPTKDGVLGTASAPIHMVAAEG------ 140
L K + +AR+ EE++ G N + + P+ + A
Sbjct: 188 LPPPTKKMTKAAREALGSEEAMKGFFLRFNHFPEVNEKIHQKPVVPVFNINANSKTNLSW 247
Query: 141 -GHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGV 199
F LW + + L + L S + E G +K +E + ++ T F DVKG+
Sbjct: 248 FDRFVSLLWLPV-LLFLVYSLTSETSTVKEANG-NKPQYFAKEYDETNQTPTSFDDVKGI 305
Query: 200 DEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCS 259
E K+ELEEIV YL P ++ T+LARAIAGEAGV F +
Sbjct: 306 QEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAGVSFLYTT 365
Query: 260 GSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLV 319
GS F+E +VGVG+RRVR+LF+AA+++ PCIIFIDEIDA+G SRN + TL QLL
Sbjct: 366 GSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSRNTA---HHNETLLQLLT 422
Query: 320 ELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLK 379
E+DGF+ N I++I ATN P SLD AL+RPGRFDRHI VP PD++GR +I++ ++ KV
Sbjct: 423 EMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIIDHYLKKVKH 482
Query: 380 ADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKS 439
+V IAR TPGF+GADL+NL+N +++ ++ A+D I+MG R +
Sbjct: 483 TVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGKETISIKQIDDARDDILMGRARLN 542
Query: 440 AVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRK 499
AV+S+E+R+ TA+HE GHALVA T+ A P+HKATIV RG +LGMV+QLP+ D +RK
Sbjct: 543 AVMSEEARRNTAYHEAGHALVAAMTEAADPIHKATIVQRGQALGMVSQLPEMDHVQYTRK 602
Query: 500 QMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNY 559
QM+ARL +C+ GR AEE+ FG + VTSGASSD QQA+ LA +M+TK+GMS +VG + H
Sbjct: 603 QMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQASSLAFSMITKWGMSDKVGFIYHK- 661
Query: 560 DDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
D S E + +IE EV++ LD+ Y +K ++
Sbjct: 662 DKT----SPEVQKIIEDEVKDLLDKQYQYSKELI 691
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 247/587 (42%), Positives = 339/587 (57%)
Query: 54 AVIRLFE-SQPSLHSNQSALSEYVKALVKVDRLDDSELLKTLQKGIANSARDEESIGGIS 112
A+ LF S +L S + SE+V A+ D+ + K + G R S G
Sbjct: 21 ALFNLFSGSGGTLQSQEKTYSEFVSAV------DEGNVTKVILDG--EQIRYRTSDGRDF 72
Query: 113 AFKNVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDR- 171
G +L + P+ + F+ I T+ L FLL+ GV +R
Sbjct: 73 VTIKPGDAEVTTLLIDKNIPVRAEKQQQSGFQS----FIITL-LPFLLLIGVWVYFMNRM 127
Query: 172 -GISKG--LGLHEEVQPSL---ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXX 225
G +G +G + L F DV G+DEAK+ELEEIV +LR+P++F+R
Sbjct: 128 QGGGRGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGK 187
Query: 226 XXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKR 285
T+LARAIAGEAGVPFF+ SGS+F EMFVGVGA RVRD+F AKK
Sbjct: 188 IPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKN 247
Query: 286 SPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESL 342
+PCI+FIDEIDA+G R + TLNQLLVE+DGF+ NEG+I++AATN + L
Sbjct: 248 APCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVL 307
Query: 343 DKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLAN 402
D AL+RPGRFDR++ V NPD++GR +I+ H K DVDL IIARGTPGFSGADLAN
Sbjct: 308 DPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLAN 367
Query: 403 LVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAV 462
LVN VTM D E AKDK+MMG+ER+S V++ + ++ TA+HE GHA+V +
Sbjct: 368 LVNEAALMAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGL 427
Query: 463 HTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGEN 522
PV+KATI+PRG +LGMV LP+ D + R + +L + M G+ AE L +GE+
Sbjct: 428 ALPMCDPVYKATIIPRGGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGED 487
Query: 523 EVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTH-----NYDDN--GKSMSTETRLLIE 575
V++G + D+QQA++LARAMV ++GMS +VG + + Y N G S+S T+ LIE
Sbjct: 488 HVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIE 547
Query: 576 KEVRNFLDRAYNNAKTILTMHSKXXXXXXXXXXXXXXXSGSQIKALL 622
+EV+ F+ + Y+ A ILT + +G +IK ++
Sbjct: 548 EEVKRFIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVM 594
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 215/419 (51%), Positives = 283/419 (67%)
Query: 188 ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAI 247
+ F DV GVDEAK+ELEEI+ +L+DPK+FT+ T+LARA+
Sbjct: 147 QGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAV 206
Query: 248 AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK-- 305
AGEAGVPFFS SGS+F EMFVGVGA RVRDLF KK +PCIIFIDEIDA+G R
Sbjct: 207 AGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLG 266
Query: 306 -DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
+ TLNQLLVE+DGF+ NEG+I+IAATN P+ LD AL+RPGRFDR +VVP PDV+
Sbjct: 267 GGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVK 326
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
GR I++ H K A DVDL +IARGTPGFSGADL+N+VN V M D
Sbjct: 327 GREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMKDF 386
Query: 425 EYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGM 484
+ AKDK++MG ER+S VIS+E +K TA+HE GH LVA G PVHK +I+PRG +LG+
Sbjct: 387 DDAKDKVLMGVERRSMVISEEEKKNTAYHEAGHTLVAKLIPGTDPVHKVSIIPRGRALGV 446
Query: 485 VAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVT 544
QLP +D+ S +++ +L R+ V MGGR AEE+IF NE+T+GA +D+++AT++AR MV
Sbjct: 447 TMQLPIEDKHSYNKESLLNRIAVLMGGRAAEEIIF--NELTTGAGNDIERATEIARKMVC 504
Query: 545 KYGMSKEVGVVTHNYDDN----GKSMSTE------TRLLIEKEVRNFLDRAYNNAKTIL 593
++GMS+++G VT + G+ MS T + I++E+R +D +Y+ K +L
Sbjct: 505 EWGMSEKMGPVTFGKKEESIFLGRDMSMHKNYSEATAVEIDEEIRKIIDGSYSRVKQLL 563
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 247/587 (42%), Positives = 339/587 (57%)
Query: 54 AVIRLFE-SQPSLHSNQSALSEYVKALVKVDRLDDSELLKTLQKGIANSARDEESIGGIS 112
A+ LF S +L S + SE+V A+ D+ + K + G R S G
Sbjct: 21 ALFNLFSGSGGTLQSQEKTYSEFVSAV------DEGNVTKVILDG--EQIRYRTSDGRDF 72
Query: 113 AFKNVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDR- 171
G +L + P+ + F+ I T+ L FLL+ GV +R
Sbjct: 73 VTIKPGDAEVTTLLIDKNIPVRAEKQQQSGFQS----FIITL-LPFLLLIGVWVYFMNRM 127
Query: 172 -GISKG--LGLHEEVQPSL---ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXX 225
G +G +G + L F DV G+DEAK+ELEEIV +LR+P++F+R
Sbjct: 128 QGGGRGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGK 187
Query: 226 XXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKR 285
T+LARAIAGEAGVPFF+ SGS+F EMFVGVGA RVRD+F AKK
Sbjct: 188 IPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKN 247
Query: 286 SPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESL 342
+PCI+FIDEIDA+G R + TLNQLLVE+DGF+ NEG+I++AATN + L
Sbjct: 248 APCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVL 307
Query: 343 DKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLAN 402
D AL+RPGRFDR++ V NPD++GR +I+ H K DVDL IIARGTPGFSGADLAN
Sbjct: 308 DPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLAN 367
Query: 403 LVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAV 462
LVN VTM D E AKDK+MMG+ER+S V++ + ++ TA+HE GHA+V +
Sbjct: 368 LVNEAALMAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGL 427
Query: 463 HTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGEN 522
PV+KATI+PRG +LGMV LP+ D + R + +L + M G+ AE L +GE+
Sbjct: 428 ALPMCDPVYKATIIPRGGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGED 487
Query: 523 EVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTH-----NYDDN--GKSMSTETRLLIE 575
V++G + D+QQA++LARAMV ++GMS +VG + + Y N G S+S T+ LIE
Sbjct: 488 HVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIE 547
Query: 576 KEVRNFLDRAYNNAKTILTMHSKXXXXXXXXXXXXXXXSGSQIKALL 622
+EV+ F+ + Y+ A ILT + +G +IK ++
Sbjct: 548 EEVKRFIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVM 594
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 1002 (357.8 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 215/478 (44%), Positives = 293/478 (61%)
Query: 154 IALGFLLISGVGALIEDRGI-SKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY 212
I G+L + + DR I S +EV P + F DV+G+DEAK E+EEIV Y
Sbjct: 209 IFFGYLT-GRIRVRVGDRQIGSLFFSNPQEVNPE-DVQVTFDDVRGMDEAKLEVEEIVDY 266
Query: 213 LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGA 272
L+DP++++R T+LARAIAGEA VPFF +GSEF+E+ VG GA
Sbjct: 267 LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGA 326
Query: 273 RRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD-QQYMKMTLNQLLVELDGFKQNEGII 331
RRVRDLF AK R+PCIIFIDEID++G R Y T+NQLL E+DGF +NEGII
Sbjct: 327 RRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSIHPYANQTINQLLSEMDGFTRNEGII 386
Query: 332 VIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARG 391
VIAATN + LDKAL+RPGRFD + VP PD+ GR I ++SK++ + +D ++A+G
Sbjct: 387 VIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKG 446
Query: 392 TPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDE-SRKLT 450
+ GF+GAD+ N+VN VTMA L+ A+D+++MG R I DE + + T
Sbjct: 447 STGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNT 506
Query: 451 AFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMG 510
A+HE GH LV+++T A P+HK TI+PRG SLG A LP+KD +++ QMLA LDV MG
Sbjct: 507 AYHEAGHTLVSLYTKDATPLHKVTIIPRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMG 566
Query: 511 GRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNGKSM---- 566
GRVAEELIFG+++VT+GA+ DL +AT+LA MV +GMS +VG+ DN ++
Sbjct: 567 GRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVGLRDFTAQDNESALVKVS 626
Query: 567 --STETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXXXXXXXXSGSQIKALL 622
+ +T LI+ E+ L +Y AK IL K S ++K ++
Sbjct: 627 DLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADEVKRVI 684
Score = 47 (21.6 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 16/79 (20%), Positives = 35/79 (44%)
Query: 107 SIGGISAFKNVG--KPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGV 164
+IGG+ +N G + +++G+ I AA Q+WR + + I+ +
Sbjct: 8 NIGGL--LQNTGLLRNSRNGI-NRKPLDIEATAASLSRVYHQVWRQFSSDTSSPVTINQM 64
Query: 165 GALIEDRGISKGLGLHEEV 183
++ D +S+ + E+
Sbjct: 65 NNILRDSTLSRRIARKSEI 83
Score = 38 (18.4 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 116 NVGKPTKDGV 125
N GKPT+D V
Sbjct: 119 NAGKPTQDEV 128
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 215/443 (48%), Positives = 294/443 (66%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV GVDEAK+E++E+V +LRDP +F R T+LA+A+AGEA
Sbjct: 155 FDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGEAK 214
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQQY 309
VPFF+ SGS+F EMFVGVGA RVRD+F AKK++PCIIFIDEIDA+G R
Sbjct: 215 VPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGGHDE 274
Query: 310 MKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI 369
+ TLNQLLVE+DGF+ EGIIV+AATN P+ LD AL+RPGRFDR +VVP PD++GR I
Sbjct: 275 REQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGREYI 334
Query: 370 MESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKD 429
++ HM+K+ A DV +IARGTPGFSGADLAN+VN V+M++ E AKD
Sbjct: 335 LKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENKKDVSMSEFERAKD 394
Query: 430 KIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLP 489
KIMMG+ER+S V+SD+ +KLTA+HE GHA+V +H PV+K TI+PRG +LG+ LP
Sbjct: 395 KIMMGAERRSMVMSDDEKKLTAYHEAGHAIVGLHMLEHDPVYKVTIIPRGRALGVTMFLP 454
Query: 490 DKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMS 549
+ D S++++++ +L GGR+AEE+IFG + VT+GAS+D+++AT++AR MVTK+G+S
Sbjct: 455 EHDRYSMTKRRLECQLAGLFGGRIAEEIIFGPDLVTTGASNDIEKATEIARNMVTKWGLS 514
Query: 550 KEVGVVTHNYDDN----GKSM------STETRLLIEKEVRNFLDRAYNNAKTILTMHSKX 599
+++G +T+ ++ G+S+ S T I+ EVR +D AY AK L H +
Sbjct: 515 QKLGPLTYREEEGEVFLGRSVTQRKDISDATNKEIDSEVRRIVDTAYTTAKQTLEEHIEQ 574
Query: 600 XXXXXXXXXXXXXXSGSQIKALL 622
+QIK +L
Sbjct: 575 LHLMAKALIKYETIGEAQIKEIL 597
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 208/433 (48%), Positives = 291/433 (67%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAG 249
NT F+DV G +EAK EL+++V +LR+P+++ R T+LA+++AG
Sbjct: 160 NTTFADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKSLAG 219
Query: 250 EAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQY 309
EA V F + +GSEFEE FVGVGA+RVR+LF AA+K SPCI+FIDEID++GGSR + +
Sbjct: 220 EARVSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTKRVNYH 279
Query: 310 MKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI 369
LNQLLVELDGF EG++V+AATN+ +SLD AL+R GRFDR I VP PD + R+ I
Sbjct: 280 PSEALNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDGKARKSI 339
Query: 370 MESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKD 429
++ ++ A V+ IA+ TPGFSGADL NLVN +TM LE AK+
Sbjct: 340 IDHYLKDKPIASHVNTTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITMEQLENAKE 399
Query: 430 KIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLP 489
+MMG ER S ++SDE+RK+ AFHE GHALVA+ T GA VHKATI+PRG +LG+V+ L
Sbjct: 400 NLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGARTVHKATIMPRGDALGLVSML- 458
Query: 490 DKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMS 549
+K+ET +++KQ++A++DV MGGR AEELI G+ ++ GASSD+Q+AT +A+AMV+ YGMS
Sbjct: 459 EKEETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSIAKAMVSNYGMS 518
Query: 550 KEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXXXX 609
++VG + Y + K +S+ R L++ EV++ LD +Y A +L +SK
Sbjct: 519 EKVGQI---YIQSEKKLSSAQRELVDSEVKSLLDSSYIRATQLLKKYSKEHHLIANALLE 575
Query: 610 XXXXSGSQIKALL 622
S +IK ++
Sbjct: 576 YETLSLDEIKDII 588
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 205/450 (45%), Positives = 286/450 (63%)
Query: 177 LGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXX 236
LG EV P E N F DVKG DEAKQEL+E+V +L+ P++F+
Sbjct: 284 LGNQVEVDPE-EINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPP 342
Query: 237 XXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEID 296
T+LARA+AGEA VPFF +G EF+E+ VG GARRVRDLF AAK R+PC+IFIDEID
Sbjct: 343 GTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEID 402
Query: 297 AIGGSR-NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRH 355
++G R N Y T+NQLL E+DGF QN G+IV+ ATN + LD+AL+RPGRFD
Sbjct: 403 SVGAKRTNSVLHPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVE 462
Query: 356 IVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXX 415
++V PD GR++I+ +++K+L D++DL ++ARGT GF+GADL N++N
Sbjct: 463 VMVSTPDFTGRKEILSLYLTKILH-DEIDLDMLARGTSGFTGADLENMINQAALRAAIDG 521
Query: 416 XXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATI 475
V+M LE A+DK++MG ERK+ + +E+ +TA+HEGGHA+VA +T + P+HK TI
Sbjct: 522 AETVSMKHLETARDKVLMGPERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTI 581
Query: 476 VPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQA 535
+PRG SLG A +P+K+ +++ Q+LA +D MGGR AEEL+FG +++TSGASSDL+QA
Sbjct: 582 MPRGPSLGHTAYIPEKERYHVTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQA 641
Query: 536 TKLARAMVTKYGMSKEVGVVTHNYDDN---GKSMSTETRLLIEKEVRNFLDRAYNNAKTI 592
T +A MV +GMS +VG+ T G ++ T ++ E++ L +Y AK I
Sbjct: 642 TSIATHMVRDWGMSDKVGLRTIEASKGLGTGDTLGPNTIEAVDAEIKRILSDSYERAKAI 701
Query: 593 LTMHSKXXXXXXXXXXXXXXXSGSQIKALL 622
L H++ IKA+L
Sbjct: 702 LRKHTREHKALAEALLKYETLDADDIKAIL 731
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 212/416 (50%), Positives = 285/416 (68%)
Query: 191 TKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
T FSDV G DEAK++++E+V YLRDP RF + T+LA+AIAGE
Sbjct: 153 TTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQ 307
A VPFF+ SGS+F EMFVGVGA RVRD+F AKK SPCIIFIDEIDA+G R
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGH 272
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ TLNQ+LVE+DGF+ NEGIIVIAATN P+ LD AL+RPGRFDR +VV PDV GR
Sbjct: 273 DEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGRE 332
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYA 427
QI++ HM KV A+DV+ +IARGTPGFSGADLANLVN V+M + E A
Sbjct: 333 QILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFELA 392
Query: 428 KDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQ 487
KDKIMMG+ER+S V+S+E ++ TA+HE GHA+V PV+K +I+PRG +LG+
Sbjct: 393 KDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRALGVTMY 452
Query: 488 LPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYG 547
LP++D S+S++ + + + GGR+AEELI+G+ +V++GAS+D+++AT++AR MVT++G
Sbjct: 453 LPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKMVTQWG 512
Query: 548 MSKEVGVVTHNYDDN----GKS------MSTETRLLIEKEVRNFLDRAYNNAKTIL 593
S+++G + + D+ G+S MS +T LI+ EVR +DR Y A+ I+
Sbjct: 513 FSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERARQII 568
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 212/416 (50%), Positives = 285/416 (68%)
Query: 191 TKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
T FSDV G DEAK++++E+V YLRDP RF + T+LA+AIAGE
Sbjct: 153 TTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQ 307
A VPFF+ SGS+F EMFVGVGA RVRD+F AKK SPCIIFIDEIDA+G R
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGH 272
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ TLNQ+LVE+DGF+ NEGIIVIAATN P+ LD AL+RPGRFDR +VV PDV GR
Sbjct: 273 DEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGRE 332
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYA 427
QI++ HM KV A+DV+ +IARGTPGFSGADLANLVN V+M + E A
Sbjct: 333 QILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFELA 392
Query: 428 KDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQ 487
KDKIMMG+ER+S V+S+E ++ TA+HE GHA+V PV+K +I+PRG +LG+
Sbjct: 393 KDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRALGVTMY 452
Query: 488 LPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYG 547
LP++D S+S++ + + + GGR+AEELI+G+ +V++GAS+D+++AT++AR MVT++G
Sbjct: 453 LPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKMVTQWG 512
Query: 548 MSKEVGVVTHNYDDN----GKS------MSTETRLLIEKEVRNFLDRAYNNAKTIL 593
S+++G + + D+ G+S MS +T LI+ EVR +DR Y A+ I+
Sbjct: 513 FSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERARQII 568
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 211/416 (50%), Positives = 280/416 (67%)
Query: 191 TKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
T F+DV G DEAK+E++E+V YLRDP +F + T+LA+AIAGE
Sbjct: 154 TTFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGE 213
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQ 307
+ VPFF+ SGS+F EMFVGVGA RVRD+F AKK +PCIIFIDEIDA+G R
Sbjct: 214 SKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGLGGGH 273
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ TLNQ+LVE+DGF+ NEGIIVIAATN P+ LD AL+RPGRFDR +VV PDV GR
Sbjct: 274 DEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGRE 333
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYA 427
QI++ HM KV ++DV +IARGTPGFSGADLANLVN V M + E A
Sbjct: 334 QILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNRRVVGMEEFERA 393
Query: 428 KDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQ 487
KDKIMMG+ER+S V+S+ +++TA+HE GHA+V PVHK TI+PRG +LG+
Sbjct: 394 KDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIVGCLVPEHDPVHKVTIIPRGRALGVTFF 453
Query: 488 LPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYG 547
LP+ D S SR+++ +++ V GGR+AEELI+G +V++GAS D++ AT +AR MVT++G
Sbjct: 454 LPEADAISQSRRKLESQISVAYGGRLAEELIYGTEKVSTGASQDIKYATSIARNMVTQWG 513
Query: 548 MSKEVGVVTHNYDDN----------GKSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
S ++G + + ++ K+MS ET LI+ EV+ F+D+ Y+ AK IL
Sbjct: 514 FSDKLGPLLYAEEEGEVFLGRSMGKAKAMSDETATLIDTEVKAFIDKNYSRAKQIL 569
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 1001 (357.4 bits), Expect = 6.2e-101, P = 6.2e-101
Identities = 217/445 (48%), Positives = 292/445 (65%)
Query: 163 GVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRX 222
G GA+ G SK L E+ + T F+DV G DEAK+E+ E+V YLR+P RF +
Sbjct: 128 GKGAM--SFGKSKARMLTED-----QIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKL 180
Query: 223 XXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAA 282
T+LA+AIAGEA VPFF+ SGS+F EMFVGVGA RVRD+F A
Sbjct: 181 GGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA 240
Query: 283 KKRSPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFP 339
KK +PCIIFIDEIDA+G R + TLNQ+LVE+DGF+ NEGIIVIAATN P
Sbjct: 241 KKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRP 300
Query: 340 ESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGAD 399
+ LD AL+RPGRFDR +VV PDV GR QI++ HM +V A D+D IIARGTPGFSGAD
Sbjct: 301 DVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGAD 360
Query: 400 LANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHAL 459
LANLVN V+M + E AKDKIMMG+ER+S V+++ ++ TA+HE GHA+
Sbjct: 361 LANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAI 420
Query: 460 VAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIF 519
+ PVHK TI+PRG +LG+ LP+ D S SR+++ +++ GGR+AEE+I+
Sbjct: 421 IGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIY 480
Query: 520 GENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDN----GKS------MSTE 569
G V++GAS+D++ AT LAR MVT++G S+++G + + ++ G+S MS E
Sbjct: 481 GPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDE 540
Query: 570 TRLLIEKEVRNFLDRAYNNAKTILT 594
T +I++EV+ ++R YN A+ +LT
Sbjct: 541 TARIIDQEVKALIERNYNRARQLLT 565
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 210/444 (47%), Positives = 290/444 (65%)
Query: 163 GVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRX 222
G GA+ G SK L EE + T F+DV G DEAK+++ E+V YLR+P RF +
Sbjct: 130 GKGAM--SFGKSKARQLSEE-----QIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKL 182
Query: 223 XXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAA 282
T+LA+AIAGEA VPFF+ SGS+F EMFVGVGA RVRD+F A
Sbjct: 183 GGRIPSGILLVGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA 242
Query: 283 KKRSPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFP 339
KK +PCIIFIDEIDA+G R + TLNQ+LVE+DGF+ NEG+IVIAATN P
Sbjct: 243 KKAAPCIIFIDEIDAVGRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRP 302
Query: 340 ESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGAD 399
+ LD AL+RPGRFDR + V PD+ GR QI++ HM KV DDV +IARGTPGFSGAD
Sbjct: 303 DVLDPALLRPGRFDRQVTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGAD 362
Query: 400 LANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHAL 459
LANLVN V+M + + AKDKIMMGSERKS V+S+ R++TA+HE GHA+
Sbjct: 363 LANLVNEAALCAARTARRVVSMKEFDAAKDKIMMGSERKSMVMSESEREMTAYHEAGHAI 422
Query: 460 VAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIF 519
+ PV+K +I+PRG +LG+ LP++D S S++ + + + GGRVAEE+I+
Sbjct: 423 IGRLVPDHDPVYKVSIIPRGRALGVTMYLPEQDRFSHSKQHLESNISSLYGGRVAEEVIY 482
Query: 520 GENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDD--------NGKS--MSTE 569
G ++V++GAS+D+++AT +AR MVT++G+S+++G + ++ + KS MS E
Sbjct: 483 GSDKVSTGASNDIERATNIARKMVTQWGLSEKMGPMLFAEEEGEVFLGRTSAKSLHMSDE 542
Query: 570 TRLLIEKEVRNFLDRAYNNAKTIL 593
T I++E+++ + R Y A+ ++
Sbjct: 543 TAKTIDEEIKSVISRNYQRAEDLI 566
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 197/417 (47%), Positives = 271/417 (64%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F+DV G+DE K+EL EIV +L++P+++ T+LARAIAGEAG
Sbjct: 157 FADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAG 216
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQQY 309
VPFFS SGS+F EMFVGVGA RVRDLF AKK +PCI+FIDEIDA+G R
Sbjct: 217 VPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDE 276
Query: 310 MKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI 369
+ TLNQLLVE+DGF NEGII+IAATN P+ LD AL+RPGRFDRHIVV PD+ GR++I
Sbjct: 277 REQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEI 336
Query: 370 MESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKD 429
++ H+ DDVDL ++AR TPGF+GADLAN+VN + M ++E A +
Sbjct: 337 LKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEMEEAIE 396
Query: 430 KIMMGSERKSAVISDESRKLTAFHEGGHALVAV---HTDGALPVHKATIVPRGMSLGMVA 486
+++ G E+KS VIS+ ++L A+HE GHA+V HTD PVHK +I+PRG + G
Sbjct: 397 RVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTD---PVHKISIIPRGRAGGYTL 453
Query: 487 QLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKY 546
LP++D + +++ Q+L + + +GGRVAE L+ ++++GA +DL++AT+ AR MV +Y
Sbjct: 454 LLPEEDRSYMTKSQLLDEITMLLGGRVAEALVL--EDISTGARNDLERATETARRMVMEY 511
Query: 547 GMSKEVGVVTHNYDDN----GKSM------STETRLLIEKEVRNFLDRAYNNAKTIL 593
GMS+E+G +T G+ + S E I+KEVR +D Y+ A+ IL
Sbjct: 512 GMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKIIDSCYSRAEEIL 568
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 197/417 (47%), Positives = 271/417 (64%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F+DV G+DE K+EL EIV +L++P+++ T+LARAIAGEAG
Sbjct: 157 FADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAG 216
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQQY 309
VPFFS SGS+F EMFVGVGA RVRDLF AKK +PCI+FIDEIDA+G R
Sbjct: 217 VPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDE 276
Query: 310 MKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI 369
+ TLNQLLVE+DGF NEGII+IAATN P+ LD AL+RPGRFDRHIVV PD+ GR++I
Sbjct: 277 REQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEI 336
Query: 370 MESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKD 429
++ H+ DDVDL ++AR TPGF+GADLAN+VN + M ++E A +
Sbjct: 337 LKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEMEEAIE 396
Query: 430 KIMMGSERKSAVISDESRKLTAFHEGGHALVAV---HTDGALPVHKATIVPRGMSLGMVA 486
+++ G E+KS VIS+ ++L A+HE GHA+V HTD PVHK +I+PRG + G
Sbjct: 397 RVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTD---PVHKISIIPRGRAGGYTL 453
Query: 487 QLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKY 546
LP++D + +++ Q+L + + +GGRVAE L+ ++++GA +DL++AT+ AR MV +Y
Sbjct: 454 LLPEEDRSYMTKSQLLDEITMLLGGRVAEALVL--EDISTGARNDLERATETARRMVMEY 511
Query: 547 GMSKEVGVVTHNYDDN----GKSM------STETRLLIEKEVRNFLDRAYNNAKTIL 593
GMS+E+G +T G+ + S E I+KEVR +D Y+ A+ IL
Sbjct: 512 GMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKIIDSCYSRAEEIL 568
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 200/453 (44%), Positives = 271/453 (59%)
Query: 158 FLL--ISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRD 215
FLL G G+ + + G SK ++E + +F DV G DE KQEL E+V +L+D
Sbjct: 129 FLLNQAQGGGSRVMNFGKSKAKLYNDE-----KKKVRFRDVAGADEEKQELVEVVEFLKD 183
Query: 216 PKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRV 275
P++F T+LARA+AGEAGVPFFS SGS+F EMFVGVGA RV
Sbjct: 184 PRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRV 243
Query: 276 RDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLLVELDGFKQNEGIIV 332
RDLF AKK +PCIIFIDEIDA+G R + TLNQLLVE+DGF NEGII+
Sbjct: 244 RDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIII 303
Query: 333 IAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGT 392
IAATN P+ LD AL+RPGRFDR I V PDV GR +++ H ++++L IA T
Sbjct: 304 IAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDENINLRAIATRT 363
Query: 393 PGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAF 452
PGFSGADL NL+N + M+D++ A D+++ G +KS VIS++ R + AF
Sbjct: 364 PGFSGADLENLLNEAALVAARQDKKKIDMSDIDEATDRVIAGPAKKSRVISEKERNIVAF 423
Query: 453 HEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGR 512
HE GH ++ V D A VHK TIVPRG + G LP +D +++ ++L ++ +GGR
Sbjct: 424 HEAGHTVIGVVLDEADVVHKVTIVPRGQAGGYAVMLPKEDRYFMTKPELLDKITGLLGGR 483
Query: 513 VAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KSMS 567
VAEE++FGE V++GA +D Q+AT +AR MVT++GMS ++G + G +
Sbjct: 484 VAEEIVFGE--VSTGAHNDFQRATGIARRMVTEFGMSDKLGPMQFGSSQGGQVFLGRDFH 541
Query: 568 TETRLL------IEKEVRNFLDRAYNNAKTILT 594
+E I+ E++ + Y AK ILT
Sbjct: 542 SEQNYSDAIAHEIDMEMQTIMKECYARAKQILT 574
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 217/535 (40%), Positives = 299/535 (55%)
Query: 80 VKVDRLDDSE--LLKTLQKGIANSARDEESIGGISAFKNVGKPTKDGVLGTASAPIHMVA 137
VK ++DD E L L+KG N E + I+ + L +A + V
Sbjct: 50 VKSAQIDDREQQLRLILKKG-NNETDGSEKV--ITKYPTGYAVDLFNALSAKNAKVSTVV 106
Query: 138 AEGGHFKEQLWRTIRTIALGFLLISGVGALIE--DRGISKGLGLHEEVQPSLESN---TK 192
+G E L L LL+ G+ + G G G + L + T
Sbjct: 107 NQGSILGELL-----VYVLPLLLLVGLFVMFSRMQGGARMGFGFGKSRAKQLSKDMPKTT 161
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F+DV GVDEA +EL EI +L++P R+ T+LARA+AGEAG
Sbjct: 162 FADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAG 221
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQQY 309
VPFF+ SGS+F EMFVGVGA RVRDLF AK+ SPCIIF+DEIDA+G R
Sbjct: 222 VPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDE 281
Query: 310 MKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI 369
+ TLNQLLVE+DGF G+I+IAATN P+ LD AL+RPGRFDR I V NPD+ GRR +
Sbjct: 282 REQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAV 341
Query: 370 MESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKD 429
+ H A D DL +A+ T G +GADLAN++N +T LE A D
Sbjct: 342 LRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVD 401
Query: 430 KIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLP 489
+++ G RK +IS++ +K+TA+HEGGH L A P++K TI+ RG + G +P
Sbjct: 402 RVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVP 461
Query: 490 DKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMS 549
++D+ +R +M+A+L MGGR AEEL+F E T+GA SD++QATK+AR+MVT++GMS
Sbjct: 462 EEDKGLRTRSEMIAQLVFAMGGRAAEELVF--REPTTGAVSDIEQATKIARSMVTEFGMS 519
Query: 550 KEVGVVTHNYDDN----GKSMST------ETRLLIEKEVRNFLDRAYNNAKTILT 594
++G V + + G++M T E I++EVR ++ A+ A ILT
Sbjct: 520 SKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILT 574
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 203/481 (42%), Positives = 273/481 (56%)
Query: 158 FLL--ISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRD 215
FLL G G+ + + G SK EE + KF DV G DE KQEL E+V +L+D
Sbjct: 128 FLLNQAQGGGSRVMNFGKSKAKLYTEE-----KKRVKFKDVAGADEEKQELVEVVEFLKD 182
Query: 216 PKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRV 275
P++F T+LA+A AGEAGVPFFS SGS+F EMFVGVGA RV
Sbjct: 183 PRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRV 242
Query: 276 RDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLLVELDGFKQNEGIIV 332
RDLF AKK +PC+IFIDEIDA+G R + TLNQLLVE+DGF NEGII+
Sbjct: 243 RDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIII 302
Query: 333 IAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGT 392
IAATN + LD AL+RPGRFDR I V PDV GR +++ H + V+L IA T
Sbjct: 303 IAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRT 362
Query: 393 PGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAF 452
PGFSGADL NL+N + D++ A D+++ G +KS VIS + R + A+
Sbjct: 363 PGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAY 422
Query: 453 HEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGR 512
HEGGH ++ + D A VHK TIVPRG + G LP +D ++ ++L ++ +GGR
Sbjct: 423 HEGGHTVIGLVLDEADMVHKVTIVPRGQAGGYAVMLPREDRYFQTKPELLDKIVGLLGGR 482
Query: 513 VAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNGK-------- 564
VAEE+IFGE V++GA +D Q+AT +AR MVT++GMS+++G + G+
Sbjct: 483 VAEEIIFGE--VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFN 540
Query: 565 ---SMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSKXXXXXXXXXXXXXXXSGSQIKAL 621
+ S + I++E++ + Y AK ILT + QIK L
Sbjct: 541 NEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHL 600
Query: 622 L 622
+
Sbjct: 601 I 601
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 206/466 (44%), Positives = 278/466 (59%)
Query: 148 WRTIRTIALGFLLISGVGALI--EDRGISK---GLGLHEEVQPSLESNT-KFSDVKGVDE 201
W T+ L FL+ G+ I + RG + G + +++ T F++V GVDE
Sbjct: 107 WGTMILTYLPFLIFGGLLIFIFTQARGANNQAVSFGRSKAKLFNMDKPTITFANVAGVDE 166
Query: 202 AKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGS 261
AKQE+ E+V +L+ ++F T+LA+AIAGEAGVPFFS SGS
Sbjct: 167 AKQEVGEVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGS 226
Query: 262 EFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLL 318
EF EMFVGVGA RVRDLF AKK +PCIIFIDEIDA+G R + TLNQ+L
Sbjct: 227 EFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQIL 286
Query: 319 VELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVL 378
VE+DGF + +IVIAATN P+ LD AL+RPGRFDR +V+ PD+ GR I++ H
Sbjct: 287 VEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAILKIHAKGKP 346
Query: 379 KADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERK 438
AD V+L +A+ T GFSGADLANL+N V DLE + D+++ G ERK
Sbjct: 347 LADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLEESIDRVIAGPERK 406
Query: 439 SAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISR 498
S IS + +++TA+HE GH LV GA PVHK +IV RGM+LG QLP++D ++R
Sbjct: 407 SRRISTQEKEVTAYHETGHGLVLRLVQGADPVHKISIVARGMTLGHTRQLPNEDRYLMTR 466
Query: 499 KQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHN 558
Q A + + G VAEEL F E+++GAS DL++AT +A MVT YGMS ++G T
Sbjct: 467 SQFKAMMAGLLAGYVAEELTF--KELSTGASDDLRRATDIAHKMVTSYGMSDKLGPRTFG 524
Query: 559 YDDN----GKSMSTETRL------LIEKEVRNFLDRAYNNAKTILT 594
+ G+ +S + +I++EVR ++ A+ AKTILT
Sbjct: 525 NKEEMVFLGREISEQKDYGEKVADMIDEEVRGLIEEAHQKAKTILT 570
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 187/422 (44%), Positives = 256/422 (60%)
Query: 185 PSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLA 244
PS + F DV G++ K EL+EIV YLRDPK+F R T+LA
Sbjct: 166 PSAKVKVTFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLA 225
Query: 245 RAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNP 304
RA+AGEA V F S S S+F EMFVGVGA RVRDLF+ AKK +P IIFIDE+DA+G SR
Sbjct: 226 RAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGA 285
Query: 305 K---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNP 361
+ TLNQLL E+DGF ++ +IV+AATN P+ LD AL+RPGRFDRH+V+ P
Sbjct: 286 GLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRP 345
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTM 421
D R +I+ H K+ DVDL +IARGTPG +GADL NLVN VTM
Sbjct: 346 DWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTM 405
Query: 422 ADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMS 481
+E AKDK++MG ERK I+++ +++TA+HE GH +VA G PVHK TI+PRG +
Sbjct: 406 EHMERAKDKVLMGGERKM-FITEQEKRITAYHEAGHTIVAKLLPGTDPVHKVTIIPRGQA 464
Query: 482 LGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARA 541
LG+ QLP+ D + ++ RL V +GGR AE +FG+ +++GA +DL+ LA
Sbjct: 465 LGVTQQLPEDDRYHYPKSYLMNRLSVALGGRQAERAVFGD--LSTGAQNDLKMVNDLAEK 522
Query: 542 MVTKYGMSKEVGVVTHNYDDN----GKSMSTETRL------LIEKEVRNFLDRAYNNAKT 591
MV ++GMS ++G +T + + G+ ++ E LI++E+ + A A
Sbjct: 523 MVCQWGMSDKIGAMTFSRGEEHPFLGRKLAEEKTFSEQMAWLIDQEIAAIIKEAEQKADN 582
Query: 592 IL 593
++
Sbjct: 583 VI 584
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 196/448 (43%), Positives = 276/448 (61%)
Query: 163 GVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRX 222
G+G + D G SK +EV P E+ F DV G D+AK EL+E+V +L++P ++T
Sbjct: 225 GLGGPM-DFGRSKSK--FQEV-P--ETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTAL 278
Query: 223 XXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAA 282
T+LARA+AGEAGVPFFSC+ SEF E+FVGVGA RVRDLF A
Sbjct: 279 GAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 338
Query: 283 KKRSPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFP 339
K ++PCI+FIDEIDA+G R + T+NQLL E+DGF N G+IV+AATN P
Sbjct: 339 KSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRP 398
Query: 340 ESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGAD 399
+ LD AL+RPGRFDR + V PDV GR QI++ H DVD +AR TPGF+GAD
Sbjct: 399 DVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGAD 458
Query: 400 LANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHAL 459
L NL+N ++ ++ A ++I+ G E+K+AV+S+E ++L A+HE GHAL
Sbjct: 459 LQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHAL 518
Query: 460 VAVHTDGALPVHKATIVPRGMSLGMVAQLPDKD--ETSI-SRKQMLARLDVCMGGRVAEE 516
V PV K +I+PRG + G+ P ++ E+ + SR + ++ V +GGRVAEE
Sbjct: 519 VGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEE 578
Query: 517 LIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG-VVTHNYDDN---GKSMSTE--- 569
+IFG+ VT+GAS+D Q +++AR MV ++G SK++G V N G+SMS++
Sbjct: 579 VIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDY 638
Query: 570 ---TRLLIEKEVRNFLDRAYNNAKTILT 594
T +++ EVR +++AY AK I+T
Sbjct: 639 SMATADVVDAEVRELVEKAYVRAKEIIT 666
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 193/450 (42%), Positives = 276/450 (61%)
Query: 163 GVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRX 222
G+G + D G SK +EV P E+ F+DV G D+AK EL+E+V +L++P ++T
Sbjct: 237 GLGGPM-DFGRSKSK--FQEV-P--ETGVSFADVAGADQAKLELQEVVDFLKNPDKYTAL 290
Query: 223 XXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAA 282
T+LARA+AGEAGVPFFSC+ SEF E+FVGVGA RVRDLF A
Sbjct: 291 GAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 350
Query: 283 KKRSPCIIFIDEIDAIGGSRNPK---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFP 339
K ++PCI+FIDEIDA+G R + T+NQLL E+DGF N G+IV+AATN P
Sbjct: 351 KSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRP 410
Query: 340 ESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGAD 399
+ LD AL+RPGRFDR + V PDV GR +I++ H DVD +AR TPGF+GAD
Sbjct: 411 DVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGAD 470
Query: 400 LANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHAL 459
L NL+N ++ ++ A ++I+ G E+K+AV+S+E ++L A+HE GHAL
Sbjct: 471 LQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHAL 530
Query: 460 VAVHTDGALPVHKATIVPRGMSLGMVAQLPDKD--ETSI-SRKQMLARLDVCMGGRVAEE 516
V PV K +I+PRG + G+ P ++ E+ + SR + ++ V +GGRVAEE
Sbjct: 531 VGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEE 590
Query: 517 LIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVG-VVTHNYDDN---GKSMSTE--- 569
+IFG+ VT+GAS+D Q +++AR M+ ++G SK++G V N G+ MS++
Sbjct: 591 VIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDY 650
Query: 570 ---TRLLIEKEVRNFLDRAYNNAKTILTMH 596
T +++ EVR +++AY A I+T H
Sbjct: 651 SMATADIVDAEVRELVEKAYKRATEIITTH 680
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 185/423 (43%), Positives = 261/423 (61%)
Query: 184 QPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTML 243
Q ++ F DV G+DEAK+EL+E+V +L+ P+RFT T+L
Sbjct: 162 QMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLL 221
Query: 244 ARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN 303
A+AIAGEAGVPFFS SGSEF EMFVGVGA RVRDLF AK+ +PC+IFIDEIDA+G R
Sbjct: 222 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRG 281
Query: 304 PK---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPN 360
+ TLNQLL E+DGF+ N GII+IAATN P+ LD AL+RPGRFDR ++V
Sbjct: 282 AGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDA 341
Query: 361 PDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVT 420
PD GR++I+E H A +V + IAR TPGFSGADLANL+N +T
Sbjct: 342 PDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAIT 401
Query: 421 MADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGM 480
+ +++ A D+++ G E + ++ +S++L A+HE GHA+V PV K T++PRG
Sbjct: 402 LLEIDDAVDRVVAGMEG-TPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQ 460
Query: 481 SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLAR 540
+ G+ P++++ ++ Q++AR+ MGGR AEE +FG++EVT+GA DLQQ T++AR
Sbjct: 461 AQGLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMAR 520
Query: 541 AMVTKYGMSKEVGVVTHNYDD----------NGKSMSTETRLLIEKEVRNFLDRAYNNAK 590
MVT++GMS +G ++ N S E I+ +VR ++ + A+
Sbjct: 521 QMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMAR 579
Query: 591 TIL 593
I+
Sbjct: 580 KIV 582
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 187/418 (44%), Positives = 262/418 (62%)
Query: 192 KFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
KFSDV G+DEAK E+ E V +L+ P+RF + T+LA+A AGE+
Sbjct: 400 KFSDVAGMDEAKVEIMEFVSFLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGES 459
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD----Q 307
GVPFFS SGSEF EMFVGVG RVRDLF+ A+K +PCIIFIDEIDAIG SR+ K+
Sbjct: 460 GVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGN 519
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ TLNQ+L E+DGF ++ ++V+A TN P+ LDKAL+RPGRFDRHI + P ++GR+
Sbjct: 520 DERESTLNQILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRK 579
Query: 368 QIMESHMSKVLKADDVDLMI--IARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLE 425
QI H+ K++ +D+D + ++ TPGF+GAD+AN VN VTM E
Sbjct: 580 QIFRVHLKKIVTKEDMDYLTGRLSALTPGFAGADIANCVNEAALVAARENAESVTMKHFE 639
Query: 426 YAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGM-SLGM 484
A ++++ G E+KS V+S E ++ A+HE GHA+ + A P+ K +I+PRG +LG
Sbjct: 640 RAIERVVGGLEKKSLVLSPEEKRTVAYHEAGHAICGWYFRWADPLLKVSIIPRGQGALGY 699
Query: 485 VAQLPDKDETSI-SRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMV 543
LP +T + + QM+ R+ + +GGRV+EEL F + VTSGAS D + T+LA AMV
Sbjct: 700 AQYLPANGDTYLMTANQMMDRMAMTLGGRVSEELHF--DTVTSGASDDFNKVTRLATAMV 757
Query: 544 TKYGMSKEVGVVTHNYDDNG---KSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
TK+GMS ++ + + D + K S ET I+ EVR ++ AY + +LT K
Sbjct: 758 TKFGMSPKLKYIYYEEDPSSQLHKPFSEETAKDIDIEVRRIVNEAYKQCRDLLTAKKK 815
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 212/543 (39%), Positives = 302/543 (55%)
Query: 76 VKALVKVDRLDDSELLKTLQKGIAN-SARDEESIGGISAFKNVGKPTKDGVLGTASAPIH 134
V+ LV V+R + + L+ G+A+ S + SIG I +F + +D P
Sbjct: 174 VERLVVVNR---NMVRVILRGGVASGSGQYYFSIGSIDSFD---RKLEDAQRQLGIPPSE 227
Query: 135 MVAAEGGHFKEQLWRTIRTIALGFLLISGV--------GALIEDRGISKGLGLHEEVQPS 186
V H + + T+ + A L+I V GA +G G+G +
Sbjct: 228 FVPV-AYHDEVSVLATLLSFAPTLLIIGSVIYLSRRASGAAGGGQGGIFGIGKSRAKMFN 286
Query: 187 LESNTK--FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLA 244
E++ K F+DV GVDEAK+E+ E V +L++PK + R T+LA
Sbjct: 287 HETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLA 346
Query: 245 RAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNP 304
+A AGEA VPF S SGSEF EMFVGVG RVRDLF+ A+K +PCIIFIDEIDAIG +R
Sbjct: 347 KATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGR 406
Query: 305 KDQ----QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPN 360
Q + TLNQLLVE+DGF +E I+V A TN P+ LD AL+RPGRFDR I +
Sbjct: 407 GGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDR 466
Query: 361 PDVEGRRQIMESHMSKVLKADDVDLMI--IARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+ GR QI + H+ + AD++DL+ +A T GF+GAD+ N+ N
Sbjct: 467 PDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNE 526
Query: 419 VTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR 478
V M E A +++ G E+KS V+S E + A HE GHA+ + P+ K +I+PR
Sbjct: 527 VQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPR 586
Query: 479 GMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKL 538
+LG + LP KD+ +SR Q+L ++ + + GRV+EE+ FG ++TSGAS D Q+ T++
Sbjct: 587 AQALGYASYLP-KDQYLMSRGQILDQMGMALAGRVSEEIFFGPEKITSGASDDFQKVTRM 645
Query: 539 ARAMVTKYGMSKEVGVVTHNYDDNG---KSMSTETRLLIEKEVRNFLDRAYNNAKTILTM 595
A+A VT+YGMS VG + + D K S T +I++E+R + AY K +L
Sbjct: 646 AQAYVTQYGMSPTVGTIAYPIDTRETVQKPFSEATAQMIDEEIRKLVKHAYERTKKLLLE 705
Query: 596 HSK 598
H +
Sbjct: 706 HKQ 708
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 192/454 (42%), Positives = 278/454 (61%)
Query: 182 EVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+V P + +F ++ G+DE+K EL E+V ++++ +++ T
Sbjct: 138 KVSPHFKP-IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKT 196
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
MLARA+A EA VP+ SG EF E++VG GA+R+R LF+ A+ +P I+FIDEIDAIGG
Sbjct: 197 MLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGK 256
Query: 302 R-----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
R N Q+ TLNQLLVE+DGF I+VI ATN ++LD AL+RPGRFDR +
Sbjct: 257 RSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 357 VVPNPDVEGRRQIMESHMSKV---LKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXX 413
VP PD+ GR++I+E ++ K+ LK +D++ IAR TPGFSGADL N+VN
Sbjct: 317 YVPLPDINGRKKILEIYIKKIKSDLKLEDIEK--IARLTPGFSGADLENVVNEATILATR 374
Query: 414 XXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGAL-PVHK 472
VT+ +L A+DK+ MG ERKS SD R++TA+HE GHA+VA P+HK
Sbjct: 375 NNKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHK 434
Query: 473 ATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDL 532
ATI+ RG +LG V Q+P D + + QM A+L VCMGGR AEE++FG++E +SGASSD+
Sbjct: 435 ATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDI 494
Query: 533 QQATKLARAMVTKYGMSKEVGVVTHN--YDDNGKS--MSTETRLLIEKEVRNFLDRAYNN 588
+AT++A MVT++GMS ++G + + D S +S +T IE EV++ +++ +
Sbjct: 495 SRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSL 554
Query: 589 AKTILTMHSKXXXXXXXXXXXXXXXSGSQIKALL 622
++ IL H K SG +IK ++
Sbjct: 555 SEEILRRHRKELDNLAFALLDKETLSGEEIKNII 588
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 192/454 (42%), Positives = 278/454 (61%)
Query: 182 EVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+V P + +F ++ G+DE+K EL E+V ++++ +++ T
Sbjct: 138 KVSPHFKP-IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKT 196
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
MLARA+A EA VP+ SG EF E++VG GA+R+R LF+ A+ +P I+FIDEIDAIGG
Sbjct: 197 MLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGK 256
Query: 302 R-----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
R N Q+ TLNQLLVE+DGF I+VI ATN ++LD AL+RPGRFDR +
Sbjct: 257 RSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 357 VVPNPDVEGRRQIMESHMSKV---LKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXX 413
VP PD+ GR++I+E ++ K+ LK +D++ IAR TPGFSGADL N+VN
Sbjct: 317 YVPLPDINGRKKILEIYIKKIKSDLKLEDIEK--IARLTPGFSGADLENVVNEATILATR 374
Query: 414 XXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGAL-PVHK 472
VT+ +L A+DK+ MG ERKS SD R++TA+HE GHA+VA P+HK
Sbjct: 375 NNKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHK 434
Query: 473 ATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDL 532
ATI+ RG +LG V Q+P D + + QM A+L VCMGGR AEE++FG++E +SGASSD+
Sbjct: 435 ATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDI 494
Query: 533 QQATKLARAMVTKYGMSKEVGVVTHN--YDDNGKS--MSTETRLLIEKEVRNFLDRAYNN 588
+AT++A MVT++GMS ++G + + D S +S +T IE EV++ +++ +
Sbjct: 495 SRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSL 554
Query: 589 AKTILTMHSKXXXXXXXXXXXXXXXSGSQIKALL 622
++ IL H K SG +IK ++
Sbjct: 555 SEEILRRHRKELDNLAFALLDKETLSGEEIKNII 588
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 197/452 (43%), Positives = 266/452 (58%)
Query: 187 LESNT--KFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLA 244
+E NT F DV GVDEAKQ+ E+V +L+ P+RFT T+LA
Sbjct: 211 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 270
Query: 245 RAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNP 304
+AIAGEAGVPFFS SGSEF EMFVGVGA RVRDLF AK+ +PCI+F+DEIDA+G R
Sbjct: 271 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGT 330
Query: 305 K---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNP 361
+ TLNQLL E+DGF+ N G+IV+AATN + LD AL+RPGRFDR + V P
Sbjct: 331 GIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVP 390
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTM 421
DV+GR I++ H V L +IA TPGFSGADLANL+N ++
Sbjct: 391 DVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISS 450
Query: 422 ADLEYAKDKIMMGSERKSAVISD-ESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGM 480
+++ + D+I+ G E V++D +S+ L A+HE GHA+ T G V K T++PRG
Sbjct: 451 KEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQ 508
Query: 481 SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLAR 540
+ G+ +P D T IS++Q+ AR+ +GGR AEE+IFGE+EVT+GA SDLQQ T LA+
Sbjct: 509 ARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAK 568
Query: 541 AMVTKYGMSKEVG----VVTHNYDD------NGKSMSTETRLLIEKEVRNFLDRAYNNAK 590
MVT +GMS E+G + + D SMS + I+ V+ D+AY A
Sbjct: 569 QMVTTFGMS-EIGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIAL 627
Query: 591 TILTMHSKXXXXXXXXXXXXXXXSGSQIKALL 622
+ + + + SG + +A+L
Sbjct: 628 SQIRNNREAMDKIVEILLEKETMSGDEFRAIL 659
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 183/373 (49%), Positives = 240/373 (64%)
Query: 187 LESNT--KFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLA 244
+E NT F DV GVDEAKQ+ E+V +L+ P+RFT T+LA
Sbjct: 218 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLA 277
Query: 245 RAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNP 304
+AIAGEAGVPFFS SGSEF EMFVGVGA RVRDLF AK+ +PCI+F+DEIDA+G R
Sbjct: 278 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGT 337
Query: 305 K---DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNP 361
+ TLNQLL E+DGF+ N G+IV+AATN + LD AL+RPGRFDR + V P
Sbjct: 338 GIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVP 397
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTM 421
DV+GR I++ H +DV L IIA TPGFSGADLANL+N ++
Sbjct: 398 DVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISS 457
Query: 422 ADLEYAKDKIMMGSERKSAVISD-ESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGM 480
+++ + D+I+ G E V++D +S+ L A+HE GHA+ T G V K T++PRG
Sbjct: 458 KEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQ 515
Query: 481 SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLAR 540
+ G+ +P D T IS++Q+ AR+ +GGR AEE+IFG++EVT+GA DLQQ T LAR
Sbjct: 516 ARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLAR 575
Query: 541 AMVTKYGMSKEVG 553
MVT +GMS ++G
Sbjct: 576 QMVTTFGMS-DIG 587
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 207/554 (37%), Positives = 317/554 (57%)
Query: 69 QSALSEYV-KALVK-VDRLDDSELLKTLQKGIANSARDEE----SIGGISAFKNVGKPTK 122
QS +++Y+ K LVK V +++S + L + A+ ++ +IG + +F+ + +
Sbjct: 238 QSFVTDYLTKNLVKKVTVINNSVVEVELNENGASQHNQQKRLYFTIGSVESFERNLREAQ 297
Query: 123 D--GVLGTASAPIHMVAAEGGHFKEQLWRTIRTIA-LGFLLISGVGALIEDRGISK-GLG 178
D + PIH G+ L + T+ LG + A G+ G G
Sbjct: 298 DKYDIPPQLRVPIHYTTK--GNMARFLINFLPTLLFLGAIYWMTKKAASSMGGMGPMGFG 355
Query: 179 LHEEVQPSLESNTK--FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXX 236
+ + E++ K F DV G+ EAKQE+ E V +L++P+++ +
Sbjct: 356 KSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAILSGPP 415
Query: 237 XXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEID 296
T+LA+A AGEAGVPF+S SGSEF EMFVGVGA RVRDLF A++ +P I+F+DEID
Sbjct: 416 GTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEID 475
Query: 297 AIGGSRNPKD----QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRF 352
AIG R+ + + TLNQLLVE+DGF ++ ++V+A TN P+ LD+AL+RPGRF
Sbjct: 476 AIGKQRSKGNATGANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRF 535
Query: 353 DRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMI---IARGTPGFSGADLANLVNIXXX 409
DRH+ + NP++ GR++I + H+ K+ D+D + +A TPGFSGAD+AN+ N
Sbjct: 536 DRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAAL 595
Query: 410 XXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALP 469
VT+ E A ++++ G E+KS +++ E +K+ A+HE GHA+ + A P
Sbjct: 596 IAARYNAEFVTLRHFELAIERVIGGVEKKSKLLNPEEQKIVAYHEAGHAICGWYLKYAHP 655
Query: 470 VHKATIVPRGM-SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGA 528
+ K +I+PRG +LG LP D+ +S Q+ R+ + +GGRV+EEL F VTSGA
Sbjct: 656 LLKVSIIPRGQGALGYAQYLPP-DQYLMSTLQLYDRMIMTLGGRVSEELHFAS--VTSGA 712
Query: 529 SSDLQQATKLARAMVTKYGMSKEVGVV----THNYDDNGKSMSTETRLLIEKEVRNFLDR 584
D ++ T +A++MV ++GMSK VG+V T + DD K S ET +I+ EV+ +
Sbjct: 713 HDDFKKVTGIAQSMVLRFGMSKTVGMVNYYDTRSQDDLTKPFSDETSRIIDSEVQRIVSD 772
Query: 585 AYNNAKTILTMHSK 598
Y K +LT SK
Sbjct: 773 CYQKCKQLLTEKSK 786
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 191/512 (37%), Positives = 296/512 (57%)
Query: 97 GIANSARDEESIGGISAFKN-VGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTI 154
G+ S + IG F+ V K D G+ + PI E + L + I
Sbjct: 206 GVTYSITNSFKIGDKKVFEEQVEKVQSDLGIPKSQFIPISY--HEYFDPRVALIQVIPYA 263
Query: 155 ALGFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLR 214
+G+L+ ++ ++ S+G + + S S KFSDV G+ EAK E+EE V++L+
Sbjct: 264 IIGYLIFRTFRSIKSNKMFSQGKSTANKFEKST-STVKFSDVAGLGEAKVEIEEFVNFLK 322
Query: 215 DPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARR 274
+PK+F T++A+A AGEA VPF+S SGS+F EMFVGVG R
Sbjct: 323 NPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSR 382
Query: 275 VRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK----DQQYMKMTLNQLLVELDGFKQNEGI 330
VRDLF A+K +PCI+FIDEIDA+G +R + TLNQLLVE+DGFK + +
Sbjct: 383 VRDLFEQARKNAPCIVFIDEIDAVGRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNV 442
Query: 331 IVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMI-IA 389
+V+AATN P+ LDKAL+RPGRFDR I + NPD++ R +I H++ +L ++ ++
Sbjct: 443 VVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFRVHLAALLLDKSINYAERLS 502
Query: 390 RGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKL 449
+ TPGFSGAD+AN+ N +T+ + A D+++ G E+K+ V+S ++
Sbjct: 503 KLTPGFSGADIANVCNEAALIAARRHAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEKRT 562
Query: 450 TAFHEGGHALVAVHTDGALPVHKATIVPRGMS-LGMVAQLPDKDETSISRKQMLARLDVC 508
A+HE GHA+V+ P+ K +IVPRG++ LG LP K++ +++Q+ + +
Sbjct: 563 VAYHEAGHAVVSWFLKHCHPLLKVSIVPRGVAALGYAQYLP-KEQFLQNQEQIFDMMCMA 621
Query: 509 MGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG----K 564
+GGRVAE+L FG +T+GA DL++ TK+A + V+ YGM++++G +++ +G K
Sbjct: 622 LGGRVAEQLTFGT--ITTGAQDDLEKITKMAYSQVSIYGMNEKIGPLSYQKGQDGSDLTK 679
Query: 565 SMSTETRLLIEKEVRNFLDRAYNNAKTILTMH 596
S ET ++++EVR L AY+ +L H
Sbjct: 680 PYSEETAEVMDEEVRKLLKSAYDRTTQVLQEH 711
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 203/561 (36%), Positives = 309/561 (55%)
Query: 88 SELLKTLQKGIANSAR-DEESIGGISAFKNV---GKPTKDGVLGTASAPIHMVAAEGGHF 143
SEL K ++ G N + +I IS+ N K D L + +A G +
Sbjct: 63 SELKKLIESGQINQVSIGQTTIKAISSSHNTVYTAKKVNDPEL-VSLLDSKNIAY--GAY 119
Query: 144 KEQLWRT--IRTIALGFLLISGVGALIEDR-----GIS-KGLGLHEEVQPSLESNTKFSD 195
E W T + + L + G+ + R G S G+G +++ S + KFSD
Sbjct: 120 SETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILGIGSSKKLVNSEKPKVKFSD 179
Query: 196 VKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPF 255
V GV+EAK+E++EIV +L+ P+R+ + T+LA+A+AGEA VPF
Sbjct: 180 VAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAKAVAGEADVPF 239
Query: 256 FSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQ----YMK 311
FS SGS F EMFVGVGA RVRDLF AKK +P I+FIDEIDAIG SR +
Sbjct: 240 FSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKSRAASGMMGGNDERE 299
Query: 312 MTLNQLLVELDGF-KQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIM 370
TLNQLL E+DGF ++ +IV+AATN PE LD AL+RPGRFDR ++V PD +GR I+
Sbjct: 300 QTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLVDKPDFKGRCDIL 359
Query: 371 ESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDK 430
+ HM V + V + IAR T G +GADLAN++N V DL A ++
Sbjct: 360 KVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSKKYVEQNDLVEAVER 419
Query: 431 IMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMS-LGMVAQLP 489
+ G E+KS I+++ +K+ +HE GHAL+A T GA V K +++PRG++ LG P
Sbjct: 420 AIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKRVSKVSVIPRGLAALGYTLNTP 479
Query: 490 DKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMS 549
++++ + + +++A +DV +GGR AEE+ GE +++GAS+DL++AT + +AM++ YGMS
Sbjct: 480 EENKFLMQKHELIAEVDVLLGGRAAEEVFIGE--ISTGASNDLERATDIIKAMISMYGMS 537
Query: 550 KEVGVVT-----HNYDDNGKSMSTETRLLIEK---EVRNFLDRAYNNAKTILTMHSKXXX 601
+ G++ + + G+++ + + E V+ LD Y + K L +
Sbjct: 538 EIAGLMVLEKQRNTFLSGGQTIKDYSEKMAESLDDYVKKTLDERYKDVKDTLNTYKGAIE 597
Query: 602 XXXXXXXXXXXXSGSQIKALL 622
G++++ ++
Sbjct: 598 TMVAALYEEETIEGNKVREII 618
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 192/506 (37%), Positives = 283/506 (55%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTIA-LGFLLISG 163
+IG + F +N+ + G+ G P+ A G F + T+ I L F+L G
Sbjct: 210 NIGSVDTFERNLETAQLELGIEGENRLPVVYSAESDGSFLLSMLPTVLIIGFLLFMLRRG 269
Query: 164 -VGALIEDRGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFT 220
GA RG+ + E L E + KF DV G +EAK E+ E V++L++PK++
Sbjct: 270 PAGAGRPGRGMGGLFSVSETTAKVLRDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQ 329
Query: 221 RXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFS 280
T+LA+A AGEA VPF + +GSEF EMFVGVG RVRDLF
Sbjct: 330 DLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFV 389
Query: 281 AAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATN 337
A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++V+A TN
Sbjct: 390 LARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTN 449
Query: 338 FPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARG----TP 393
P+ LD AL+RPGRFDR I + PD++GR I + H+ + ++D +AR TP
Sbjct: 450 RPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTP 509
Query: 394 GFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFH 453
GFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K A+H
Sbjct: 510 GFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYH 569
Query: 454 EGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRV 513
E GHA+ + A P+ K +I+PRG LG LP K++ +++Q+L R+ + +GGRV
Sbjct: 570 EAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRMCMTLGGRV 628
Query: 514 AEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KSMST 568
+EE+ FG +T+GA DL++ T+ A A + ++GM+++VG V+ + G K S
Sbjct: 629 SEEIFFGR--ITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQVSFDLPRQGELVLEKPYSE 686
Query: 569 ETRLLIEKEVRNFLDRAYNNAKTILT 594
T LI+ EVRN + AY + +L+
Sbjct: 687 ATARLIDTEVRNLISTAYERTQQLLS 712
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 191/509 (37%), Positives = 286/509 (56%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLI--- 161
+IG + F +N+ ++ G+ G P+ +A G F + T+ IA I
Sbjct: 215 NIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRG 274
Query: 162 -SGVGALIEDRGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKR 218
+G+G RG+ + E L E + KF DV G +EAK E+ E V++L++PK+
Sbjct: 275 PAGIGRT--GRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQ 332
Query: 219 FTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDL 278
+ T+LA+A AGEA VPF + SGSEF EMFVGVG RVRDL
Sbjct: 333 YQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDL 392
Query: 279 FSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAA 335
F+ A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++++A
Sbjct: 393 FALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAG 452
Query: 336 TNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDV---DLMI--IAR 390
TN P+ LD AL+RPGRFDR I + PD++GR I + H+ + LK D D + +A
Sbjct: 453 TNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHL-RPLKLDSTLEKDKLARKLAS 511
Query: 391 GTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLT 450
TPGFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K
Sbjct: 512 LTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTV 571
Query: 451 AFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMG 510
A+HE GHA+ + + A P+ K +I+PRG LG LP K++ +++Q+L R+ + +G
Sbjct: 572 AYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRMCMTLG 630
Query: 511 GRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KS 565
GRV+EE+ FG +T+GA DL++ T+ A A + ++GM+++VG ++ + G K
Sbjct: 631 GRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKP 688
Query: 566 MSTETRLLIEKEVRNFLDRAYNNAKTILT 594
S T LI+ EVR ++ AY +LT
Sbjct: 689 YSEATARLIDDEVRILINDAYKRTVALLT 717
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 500 (181.1 bits), Expect = 5.5e-81, Sum P(2) = 5.5e-81
Identities = 105/202 (51%), Positives = 136/202 (67%)
Query: 188 ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAI 247
E KF DV G DE+K+E+ E V +L+DP ++ + T+LA+A
Sbjct: 281 EVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKAT 340
Query: 248 AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR-NPK- 305
AGEAGVPF S SGSEF EMFVGVGA RVRDLF A++ +P IIF+DEIDAIG R N +
Sbjct: 341 AGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRM 400
Query: 306 -DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
+ TLNQLLVE+DGF + ++V+A TN P+ LDKAL+RPGRFDRHI + PDVE
Sbjct: 401 GGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVE 460
Query: 365 GRRQIMESHMSKV-LKA-DDVD 384
GR+QI + H++K+ LK+ D+D
Sbjct: 461 GRKQIFKVHLNKLKLKSVQDID 482
Score = 342 (125.4 bits), Expect = 5.5e-81, Sum P(2) = 5.5e-81
Identities = 81/243 (33%), Positives = 137/243 (56%)
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMI--IARGTPGFSGADLANLVNIXXXXXXXXXXXXV 419
D++ +++ ++ + LK ++++ + +A TPGF+GAD+AN N V
Sbjct: 480 DIDAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 420 TMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRG 479
E A ++++ G E+KS ++S E +K A+HE GHA+ A P+ K +I+PRG
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRG 599
Query: 480 M-SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKL 538
+LG LP KD+ S++Q R+ + +GGRV+EEL F + VTSGAS D ++ T++
Sbjct: 600 QGALGYAQYLP-KDQYLTSQEQFKHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQM 656
Query: 539 ARAMVTKYGMSKEVGVVTHNYD-DNGKSM------STETRLLIEKEVRNFLDRAYNNAKT 591
A+ M+ K GMS ++G + ++ DNG S T +I++EV+ +D +Y
Sbjct: 657 AQQMILKLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHK 716
Query: 592 ILT 594
+LT
Sbjct: 717 LLT 719
Score = 50 (22.7 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 15/68 (22%), Positives = 33/68 (48%)
Query: 133 IHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTK 192
+ M G L++T R +A + + + A+ ++RG + +G ++E + +L N
Sbjct: 357 VEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGR-MGGNDERENTL--NQL 413
Query: 193 FSDVKGVD 200
++ G D
Sbjct: 414 LVEMDGFD 421
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 500 (181.1 bits), Expect = 5.5e-81, Sum P(2) = 5.5e-81
Identities = 105/202 (51%), Positives = 136/202 (67%)
Query: 188 ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAI 247
E KF DV G DE+K+E+ E V +L+DP ++ + T+LA+A
Sbjct: 281 EVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKAT 340
Query: 248 AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR-NPK- 305
AGEAGVPF S SGSEF EMFVGVGA RVRDLF A++ +P IIF+DEIDAIG R N +
Sbjct: 341 AGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRM 400
Query: 306 -DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
+ TLNQLLVE+DGF + ++V+A TN P+ LDKAL+RPGRFDRHI + PDVE
Sbjct: 401 GGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVE 460
Query: 365 GRRQIMESHMSKV-LKA-DDVD 384
GR+QI + H++K+ LK+ D+D
Sbjct: 461 GRKQIFKVHLNKLKLKSVQDID 482
Score = 342 (125.4 bits), Expect = 5.5e-81, Sum P(2) = 5.5e-81
Identities = 81/243 (33%), Positives = 137/243 (56%)
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMI--IARGTPGFSGADLANLVNIXXXXXXXXXXXXV 419
D++ +++ ++ + LK ++++ + +A TPGF+GAD+AN N V
Sbjct: 480 DIDAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 420 TMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRG 479
E A ++++ G E+KS ++S E +K A+HE GHA+ A P+ K +I+PRG
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRG 599
Query: 480 M-SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKL 538
+LG LP KD+ S++Q R+ + +GGRV+EEL F + VTSGAS D ++ T++
Sbjct: 600 QGALGYAQYLP-KDQYLTSQEQFKHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQM 656
Query: 539 ARAMVTKYGMSKEVGVVTHNYD-DNGKSM------STETRLLIEKEVRNFLDRAYNNAKT 591
A+ M+ K GMS ++G + ++ DNG S T +I++EV+ +D +Y
Sbjct: 657 AQQMILKLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHK 716
Query: 592 ILT 594
+LT
Sbjct: 717 LLT 719
Score = 50 (22.7 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 15/68 (22%), Positives = 33/68 (48%)
Query: 133 IHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTK 192
+ M G L++T R +A + + + A+ ++RG + +G ++E + +L N
Sbjct: 357 VEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGR-MGGNDERENTL--NQL 413
Query: 193 FSDVKGVD 200
++ G D
Sbjct: 414 LVEMDGFD 421
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 191/509 (37%), Positives = 287/509 (56%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLI--- 161
+IG + F +N+ ++ G+ G P+ +A G F + T+ IA I
Sbjct: 216 NIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRG 275
Query: 162 -SGVGALIEDRGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKR 218
+G+G RG+ + E L E + KF DV G +EAK E+ E V++L++PK+
Sbjct: 276 PAGIGRT--GRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQ 333
Query: 219 FTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDL 278
+ T+LA+A AGEA VPF + SGSEF EMFVGVG RVRDL
Sbjct: 334 YQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDL 393
Query: 279 FSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAA 335
F+ A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++++A
Sbjct: 394 FALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAG 453
Query: 336 TNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADD-VDLMIIARG--- 391
TN P+ LD AL+RPGRFDR I + PD++GR I + H+ + LK D ++ +AR
Sbjct: 454 TNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHL-RPLKLDSTLEKEKLARKLAS 512
Query: 392 -TPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLT 450
TPGFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K
Sbjct: 513 LTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTV 572
Query: 451 AFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMG 510
A+HE GHA+ + + A P+ K +I+PRG LG LP +++ +R+Q+L R+ + +G
Sbjct: 573 AYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLP-REQYLYTREQLLDRMCMTLG 631
Query: 511 GRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KS 565
GRV+EE+ FG +T+GA DL++ T+ A A + ++GM+++VG ++ + G K
Sbjct: 632 GRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKP 689
Query: 566 MSTETRLLIEKEVRNFLDRAYNNAKTILT 594
S T LI+ EVR ++ AY +LT
Sbjct: 690 YSEATARLIDDEVRILINDAYKRTVALLT 718
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 191/509 (37%), Positives = 287/509 (56%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLI--- 161
+IG + F +N+ ++ G+ G P+ +A G F + T+ IA I
Sbjct: 216 NIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRG 275
Query: 162 -SGVGALIEDRGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKR 218
+G+G RG+ + E L E + KF DV G +EAK E+ E V++L++PK+
Sbjct: 276 PAGIGRT--GRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQ 333
Query: 219 FTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDL 278
+ T+LA+A AGEA VPF + SGSEF EMFVGVG RVRDL
Sbjct: 334 YQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDL 393
Query: 279 FSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAA 335
F+ A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++++A
Sbjct: 394 FALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAG 453
Query: 336 TNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADD-VDLMIIARG--- 391
TN P+ LD AL+RPGRFDR I + PD++GR I + H+ + LK D ++ +AR
Sbjct: 454 TNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHL-RPLKLDSALEKEKLARKLAS 512
Query: 392 -TPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLT 450
TPGFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K
Sbjct: 513 LTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTV 572
Query: 451 AFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMG 510
A+HE GHA+ + + A P+ K +I+PRG LG LP K++ +++Q+L R+ + +G
Sbjct: 573 AYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRMCMTLG 631
Query: 511 GRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KS 565
GRV+EE+ FG +T+GA DL++ T+ A A + ++GM+++VG ++ + G K
Sbjct: 632 GRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKP 689
Query: 566 MSTETRLLIEKEVRNFLDRAYNNAKTILT 594
S T LI+ EVR ++ AY +LT
Sbjct: 690 YSEATARLIDDEVRILINDAYKRTVALLT 718
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 190/509 (37%), Positives = 285/509 (55%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLI--- 161
+IG + F +N+ ++ G+ G P+ +A G F + T+ IA I
Sbjct: 214 NIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRG 273
Query: 162 -SGVGALIEDRGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKR 218
+G+G RG+ + E L E + KF DV G +EAK E+ E V++L++PK+
Sbjct: 274 PAGIGRT--GRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQ 331
Query: 219 FTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDL 278
+ T+LA+A AGEA VPF + SGSEF EMFVGVG RVRDL
Sbjct: 332 YQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDL 391
Query: 279 FSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAA 335
F+ A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++++A
Sbjct: 392 FALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAG 451
Query: 336 TNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDV---DLMI--IAR 390
TN P+ LD AL+RPGRFDR I + PD++GR I + H+ + LK D D + +A
Sbjct: 452 TNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHL-RPLKLDSALEKDKLARKLAS 510
Query: 391 GTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLT 450
TPGFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K
Sbjct: 511 LTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTV 570
Query: 451 AFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMG 510
A+HE GHA+ + + A P+ K +I+PRG LG LP K++ +++Q+L R+ + +G
Sbjct: 571 AYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRMCMTLG 629
Query: 511 GRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KS 565
GRV+EE+ FG +T+GA DL++ T+ A A + ++GM+++VG ++ + G K
Sbjct: 630 GRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKP 687
Query: 566 MSTETRLLIEKEVRNFLDRAYNNAKTILT 594
S T +I+ EVR + AY +LT
Sbjct: 688 YSEATARMIDDEVRILISEAYKRTVALLT 716
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 190/509 (37%), Positives = 285/509 (55%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLI--- 161
+IG + F +N+ ++ G+ G P+ +A G F + T+ IA I
Sbjct: 214 NIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRG 273
Query: 162 -SGVGALIEDRGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKR 218
+G+G RG+ + E L E + KF DV G +EAK E+ E V++L++PK+
Sbjct: 274 PAGIGRT--GRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQ 331
Query: 219 FTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDL 278
+ T+LA+A AGEA VPF + SGSEF EMFVGVG RVRDL
Sbjct: 332 YQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDL 391
Query: 279 FSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAA 335
F+ A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++++A
Sbjct: 392 FALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAG 451
Query: 336 TNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDV---DLMI--IAR 390
TN P+ LD AL+RPGRFDR I + PD++GR I + H+ + LK D D + +A
Sbjct: 452 TNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHL-RPLKLDSALEKDKLARKLAS 510
Query: 391 GTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLT 450
TPGFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K
Sbjct: 511 LTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTV 570
Query: 451 AFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMG 510
A+HE GHA+ + + A P+ K +I+PRG LG LP K++ +++Q+L R+ + +G
Sbjct: 571 AYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRMCMTLG 629
Query: 511 GRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KS 565
GRV+EE+ FG +T+GA DL++ T+ A A + ++GM+++VG ++ + G K
Sbjct: 630 GRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKP 687
Query: 566 MSTETRLLIEKEVRNFLDRAYNNAKTILT 594
S T +I+ EVR + AY +LT
Sbjct: 688 YSEATARMIDDEVRILISDAYRRTVALLT 716
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 200/540 (37%), Positives = 304/540 (56%)
Query: 75 YVKALVKVDRLDDSELLKTLQKGIA-NSARDEE--SIGGISAFKNVGKPTKDGVLGTASA 131
YV L+ V++ +L K A N R+ +IG I +F++ + +D +
Sbjct: 220 YVAKLIVVNKSMVKVMLNDNGKNQADNYGRNFYYFTIGSIDSFEHKLQKAQDELDIDKDF 279
Query: 132 PIHMVAAEGGHFKEQLWRTIRTIAL--GFLLISGVGALIEDRGISKG--LGLHEEVQPSL 187
I ++ + G++ + +++ + T+ + G + ++ A + G S+G GL
Sbjct: 280 RIPVLYVQEGNWAKAMFQILPTVLMIAGIIWLTRRSA--QAAGGSRGGIFGLSRSKAKKF 337
Query: 188 ESNT----KFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTML 243
+ T KF DV G DEAK+E+ E V +L++P R+ + T+L
Sbjct: 338 NTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLL 397
Query: 244 ARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN 303
A+A AGEAGVPF+ SGSEF EMFVGVGA RVRDLF A++ +P I+FIDEIDAIG +R
Sbjct: 398 AKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQ 457
Query: 304 PKD----QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
+ + TLNQ+LVE+DGF + ++V+A TN P+ LDKAL+RPGRFDRHI +
Sbjct: 458 KGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINID 517
Query: 360 NPDVEGRRQIMESHMSKVLKADDV-DLMI-IARGTPGFSGADLANLVNIXXXXXXXXXXX 417
P++EGR+ I H+ + A ++ DL +A TPGFSGAD+AN+ N
Sbjct: 518 KPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDED 577
Query: 418 XVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVP 477
V + E A ++++ G ERKS ++S E +K+ A+HE GHA+ + A P+ K +I+P
Sbjct: 578 AVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIP 637
Query: 478 RGM-SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQAT 536
RG +LG LP D ++ +Q+ R+ + +GGRV+EEL F VTSGAS D ++ T
Sbjct: 638 RGQGALGYAQYLPG-DIFLLTEQQLKDRMTMSLGGRVSEELHFPS--VTSGASDDFKKVT 694
Query: 537 KLARAMVTKYGMSKEVGVVTHNYDDNG---KSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
+A AMVT+ GMS ++G V + D+ K S ET +I+ EV + ++ +L
Sbjct: 695 SMATAMVTELGMSDKIGWVNYQKRDDSDLTKPFSDETGDIIDSEVYRIVQECHDRCTKLL 754
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 191/507 (37%), Positives = 287/507 (56%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTI-ALGFLLISG 163
+IG + F +N+ +D G+ P+ G F L TI I +L + L G
Sbjct: 215 NIGSVDTFERNLETVQQDLGIEVENRLPVVYSTESDGSFLLSLLPTILIIGSLLYTLRRG 274
Query: 164 VGALIED-RGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFT 220
L RG+ + E L E + KF DV G +EAK E+ E V++L++PK++
Sbjct: 275 PAGLGRGGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYE 334
Query: 221 RXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFS 280
T+LA+A AGEA VPF + +GSEF EMFVGVG RVRDLF+
Sbjct: 335 DLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFA 394
Query: 281 AAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATN 337
A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++++A TN
Sbjct: 395 LARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTN 454
Query: 338 FPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDV-DLMIIARG----T 392
P+ LD AL+RPGRFDR I + PD++GR I + H+ + LK D V D +AR T
Sbjct: 455 RPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHL-RPLKLDTVLDKDNLARKLASLT 513
Query: 393 PGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAF 452
PGFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K A+
Sbjct: 514 PGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAY 573
Query: 453 HEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGR 512
HE GHA+ + A P+ K +I+PRG LG LP K++ +++Q+L R+ + +GGR
Sbjct: 574 HEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRMCMTLGGR 632
Query: 513 VAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KSMS 567
V+E++ FG +T+GA DL++ T+ A A + ++GM+++VG ++ + G K S
Sbjct: 633 VSEQIFFGR--ITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYS 690
Query: 568 TETRLLIEKEVRNFLDRAYNNAKTILT 594
T +I++EVR+ ++ AY+ ++LT
Sbjct: 691 EATARMIDEEVRSLINIAYDRTLSLLT 717
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 191/507 (37%), Positives = 287/507 (56%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTI-ALGFLLISG 163
+IG + F +N+ +D G+ P+ G F L TI I +L + L G
Sbjct: 59 NIGSVDTFERNLETVQQDLGIEVENRLPVVYSTESDGSFLLSLLPTILIIGSLLYTLRRG 118
Query: 164 VGALIED-RGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFT 220
L RG+ + E L E + KF DV G +EAK E+ E V++L++PK++
Sbjct: 119 PAGLGRGGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYE 178
Query: 221 RXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFS 280
T+LA+A AGEA VPF + +GSEF EMFVGVG RVRDLF+
Sbjct: 179 DLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFA 238
Query: 281 AAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATN 337
A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++++A TN
Sbjct: 239 LARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTN 298
Query: 338 FPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDV-DLMIIARG----T 392
P+ LD AL+RPGRFDR I + PD++GR I + H+ + LK D V D +AR T
Sbjct: 299 RPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHL-RPLKLDTVLDKDNLARKLASLT 357
Query: 393 PGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAF 452
PGFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K A+
Sbjct: 358 PGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAY 417
Query: 453 HEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGR 512
HE GHA+ + A P+ K +I+PRG LG LP K++ +++Q+L R+ + +GGR
Sbjct: 418 HEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRMCMTLGGR 476
Query: 513 VAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KSMS 567
V+E++ FG +T+GA DL++ T+ A A + ++GM+++VG ++ + G K S
Sbjct: 477 VSEQIFFGR--ITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYS 534
Query: 568 TETRLLIEKEVRNFLDRAYNNAKTILT 594
T +I++EVR+ ++ AY+ ++LT
Sbjct: 535 EATARMIDEEVRSLINIAYDRTLSLLT 561
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 170/421 (40%), Positives = 252/421 (59%)
Query: 188 ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAI 247
E F DV G +EAK E+ E V++L++P+++ T+LA+A
Sbjct: 322 EIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKAT 381
Query: 248 AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD- 306
AGEA VPF + SGSEF EMFVGVG RVRD+F+ A+K +PCI+FIDEIDA+G R K
Sbjct: 382 AGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTF 441
Query: 307 --QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
+ TLNQLLVE+DGF ++V+AATN + LDKAL+RPGRFDR I VP PD++
Sbjct: 442 GGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIK 501
Query: 365 GRRQIMESHMSKVLKADDVDLMI--IARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMA 422
GR I + H+ + + D + + +A TPGF+GAD+AN+ N + +
Sbjct: 502 GRASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLK 561
Query: 423 DLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSL 482
E A ++++ G E+K+ V++ E ++ A HE GHA+ + A P+ K +I+PRG L
Sbjct: 562 HFEQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKGL 621
Query: 483 GMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAM 542
G LP KD +S++Q+ R+ + +GGRVAEEL F N +T+GA DL++ T +A +
Sbjct: 622 GYAQYLP-KDHYLLSKEQLFDRMCMTLGGRVAEELFF--NRITTGAQDDLKKITDIAYSQ 678
Query: 543 VTKYGMSKEVGVVTHNYDDNG-----KSMSTETRLLIEKEVRNFLDRAYNNAKTILTMHS 597
V ++GM+++VG V+ + G K S +T LI+ EVR+ + A+ ++LT H
Sbjct: 679 VVRFGMNEKVGQVSFDVGQAGDPVFSKPYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHK 738
Query: 598 K 598
+
Sbjct: 739 E 739
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 181/452 (40%), Positives = 263/452 (58%)
Query: 164 VGALIE-DRGISKGL-----GLHEEVQPSLE--SNTKFSDVKGVDEAKQELEEIVHYLRD 215
+G LI RGI+ L L + +++ S T F DV G+DEAK+E+ E V +L+D
Sbjct: 316 IGLLIYFSRGINSSLTKGASSLFKSKSKAVKATSTTTFKDVAGMDEAKEEIMEFVSFLKD 375
Query: 216 PKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRV 275
P R+ + T+LA+A AGEAGV F++ SGS+F EMFVGVG RV
Sbjct: 376 PSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRV 435
Query: 276 RDLFSAAKKRSPCIIFIDEIDAIGG--SRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVI 333
RDLF A+ +PCI+FIDEIDA+G SR + TLNQLLVE+DGF G++V
Sbjct: 436 RDLFKEARANTPCIVFIDEIDAVGRARSRGGFHNDERENTLNQLLVEMDGFSSTSGVVVF 495
Query: 334 AATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMI--IARG 391
A TN + LD AL+RPGRFDR I V PD++GR+ I H+ + +++ + +A
Sbjct: 496 AGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDIFMVHLKNIKLDGEMEEIAKKLATL 555
Query: 392 TPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTA 451
TPGFSGAD+AN+ N E A +++++G +R++ V+S E R + A
Sbjct: 556 TPGFSGADIANVCNEGALVAARKDATSANFDHFEEAIERVLVGLKRENRVLSPEERTIVA 615
Query: 452 FHEGGHALVAVHTDGALPVHKATIVPRGM-SLGMVAQLPDKDETSISRKQMLARLDVCMG 510
HE GHA+V + P+ K +IVPRG +LG AQ KD+ +R+Q+ R+ V +G
Sbjct: 616 HHEAGHAVVGWFLEHTDPLLKVSIVPRGSGTLGF-AQYQPKDQYLYTREQLFDRICVSLG 674
Query: 511 GRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG----KSM 566
GR+AE +IF + +++GA DL + TK+A A V YGMS++VGV + + + K
Sbjct: 675 GRIAESIIF--DRISTGAMDDLDKVTKMASASVVNYGMSEKVGVASFRKEGDDITVVKPY 732
Query: 567 STETRLLIEKEVRNFLDRAYNNAKTILTMHSK 598
S T +I++E+R ++ AY+ KT +H K
Sbjct: 733 SQATARMIDEEIRRMVNDAYS--KTTQLLHEK 762
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 183/453 (40%), Positives = 266/453 (58%)
Query: 157 GFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTK--FSDVKGVDEAKQELEEIVHYLR 214
G L + G G RGI +G + S K F DV G DEAKQE+ E VH+L+
Sbjct: 285 GGLGVGGTGGK-NGRGIFN-IGKATITRADKHSKNKIYFKDVAGCDEAKQEIMEFVHFLK 342
Query: 215 DPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARR 274
+PK++ T+LA+A AGE+GVPF S SGS+F EMFVGVG R
Sbjct: 343 NPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSR 402
Query: 275 VRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQYMKMTLNQLLVELDGFKQNEGII 331
VR LF A++ +P IIFIDEIDAIG +R + TLNQLLVE+DGF G++
Sbjct: 403 VRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVV 462
Query: 332 VIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMI---I 388
V+A TN P+ LDKAL+RPGRFDR I + PD++GR QI + ++ K+ K D +
Sbjct: 463 VLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKI-KLDHEPSYYSQRL 521
Query: 389 ARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRK 448
A TPGF+GAD+AN+ N VTMA E A D+++ G E+K+ VIS R+
Sbjct: 522 AALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVIGGLEKKNRVISKLERR 581
Query: 449 LTAFHEGGHALVAVHTDGALPVHKATIVPRGMS-LGMVAQLPDKDETSISRKQMLARLDV 507
A+HE GHA+V + A P+ K TIVPRG + LG +P+++ ++++Q+ +
Sbjct: 582 TVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCM 640
Query: 508 CMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG---- 563
+GGR AE+++ G+ +++GA +DL++ TK+ A V YG S +VG+++ D+G
Sbjct: 641 TLGGRAAEQVLIGK--ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDFS 698
Query: 564 KSMSTETRLLIEKEVRNFLDRAYNNAKTILTMH 596
K S +T +I++EVR+++ +AY ++ H
Sbjct: 699 KPYSNKTGAIIDEEVRDWVAKAYERTVELVEEH 731
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 196/544 (36%), Positives = 302/544 (55%)
Query: 74 EYVKALVKVDRLD--DSELLKTLQKGIANSARDEE-SIGGISAF-KNVGKPTKD-GVLGT 128
+Y A VDRL+ + + ++ + S R +IG + F +N+ + G+ T
Sbjct: 172 QYYLARGLVDRLEVVNKQFVRVIPVPGTTSERFVWFNIGSVDTFERNLESAQWELGIEPT 231
Query: 129 ASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLH---EEVQP 185
A + G F L T+ +++ L G + RG +G GL E
Sbjct: 232 NQAAVVYTTESDGSFLRSLVPTLVLVSI-LLYAMRRGPMGTGRG-GRGGGLFSVGETTAK 289
Query: 186 SLESN--TKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTML 243
L++N +F+DV G +EAK E+ E V++L++PK++ T+L
Sbjct: 290 ILKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLL 349
Query: 244 ARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN 303
A+A AGEA VPF + +GSEF EMFVGVG RVRD+F+ A+K +PCI+FIDEIDAIG R
Sbjct: 350 AKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRG 409
Query: 304 PKD---QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPN 360
Q + TLNQ+LVE+DGF + ++V+A TN P+ LD AL RPGRFDR I +
Sbjct: 410 RGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGP 469
Query: 361 PDVEGRRQIMESHMSKVLKAD---DVDLMI--IARGTPGFSGADLANLVNIXXXXXXXXX 415
PD++GR I + H+ + LK D D + +A TPGF+GAD++N+ N
Sbjct: 470 PDIKGRSSIFKVHL-RPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHL 528
Query: 416 XXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATI 475
V E A ++++ G E+K+ V+ + A+HE GHA+V + A P+ K +I
Sbjct: 529 SPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSI 588
Query: 476 VPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQA 535
+PRG LG LP +++ +R+Q+ R+ + +GGRVAE+L FG+ +T+GA DL++
Sbjct: 589 IPRGKGLGYAQYLP-REQFLYTREQLFDRMCMMLGGRVAEQLFFGQ--ITTGAQDDLRKV 645
Query: 536 TKLARAMVTKYGMSKEVGVVTHNYDDNGKSM-----STETRLLIEKEVRNFLDRAYNNAK 590
T+ A A + ++GMS+++G V+ ++ G++M S T LI++EVR + AYN
Sbjct: 646 TQSAYAQIVQFGMSEKLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRSAYNRTL 705
Query: 591 TILT 594
+LT
Sbjct: 706 ELLT 709
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 179/443 (40%), Positives = 258/443 (58%)
Query: 163 GVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRX 222
G+G + G S ++ E + KF+DV G +EAK E+ E V++L++P+++
Sbjct: 267 GLGGMFGGFGQSTARVINRE-----DIKVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDL 321
Query: 223 XXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAA 282
T+LA+A AGEA VPF + SGSEF EMFVGVG RVRD+FS A
Sbjct: 322 GAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMA 381
Query: 283 KKRSPCIIFIDEIDAIGGSRNPKD----QQYMKMTLNQLLVELDGFKQNEG-IIVIAATN 337
+K SPCI+FIDEIDA+G R K + TLNQLLVE+DGF +E +IVIAATN
Sbjct: 382 RKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATN 441
Query: 338 FPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMI--IARGTPGF 395
+ LD AL+RPGRFDR I VP PD++GR I H+ + + D ++ +A TPGF
Sbjct: 442 RVDILDSALLRPGRFDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGF 501
Query: 396 SGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEG 455
SGAD++N+ N ++ E A ++++ G E+K+ V+ E +K A+HE
Sbjct: 502 SGADISNVCNEAALIAARDANHEISNKHFEQAIERVVAGMEKKTQVLQKEEKKTVAYHEA 561
Query: 456 GHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAE 515
GHA+ A P+ K +I+PRG LG LP K++ S+ Q+L R+ + +GGRVAE
Sbjct: 562 GHAIAGWFLQHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYSKDQLLDRMCMTLGGRVAE 620
Query: 516 ELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG-----KSMSTET 570
E+ FG +T+GA DLQ+ T++A + V K+GMS++VG ++ G K S T
Sbjct: 621 EIFFGR--ITTGAQDDLQKVTQMAYSQVVKFGMSEKVGPLSFETPAPGEMAFDKPYSEAT 678
Query: 571 RLLIEKEVRNFLDRAYNNAKTIL 593
LI++EVR+ + A + +L
Sbjct: 679 AQLIDQEVRDLVMNALRRTRDLL 701
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 177/418 (42%), Positives = 251/418 (60%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F +V G DEAKQE+ E VH+L++P ++T+ T+LA+A AGEA
Sbjct: 287 FKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEAN 346
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD-----Q 307
VPF S SGSEF EMFVGVGA RVRDLF+ A+ +P IIFIDEIDAIG R
Sbjct: 347 VPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGAN 406
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ TLNQLLVE+DGF ++ ++V+A TN P+ LD AL+RPGRFDRHI + +PDV GR+
Sbjct: 407 DEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQ 466
Query: 368 QIMESHMSKV----LKADDVDLMI--IARGTPGFSGADLANLVNIXXXXXXXXXXXXVTM 421
QI H+ ++ L DD++ + +A TPGF+GAD+AN N +T+
Sbjct: 467 QIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITI 526
Query: 422 ADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGM- 480
E A ++++ G E+K+ V+S E ++ A+HE GHA+ A P+ K +I+PRG
Sbjct: 527 HHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQG 586
Query: 481 SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLAR 540
+LG LP D+ IS +Q R+ + +GGRV+EEL F VTSGA D ++ T++A
Sbjct: 587 ALGYAQYLPP-DQYLISEEQFRHRMIMALGGRVSEELHFPS--VTSGAHDDFKKVTQMAN 643
Query: 541 AMVTKYGMSKEVGVVTHNYDDNG----KSMSTETRLLIEKEVRNFLDRAYNNAKTILT 594
AMVT GMS ++G ++ + +D K S +T I+ EV++ +D A+ +LT
Sbjct: 644 AMVTSLGMSPKIGYLSFDQNDGNFKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLT 701
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 196/545 (35%), Positives = 302/545 (55%)
Query: 74 EYVKALVKVDRLD--DSELLKTLQ-KGIANSARDEESIGGISAF-KNVGKPTKD-GVLGT 128
+Y A VDRL+ + + ++ + G + +IG + F +N+ + GV T
Sbjct: 144 QYYLARGLVDRLEVVNKQFVRVIPVPGTTSEKFVWFNIGSVDTFERNLESAQWELGVEPT 203
Query: 129 ASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGV-GALIEDRGISKGLGLH---EEVQ 184
+ G L T+ + +G LL + G + RG +G GL E
Sbjct: 204 NQVSVVYTTESDGSLLRSLVPTL--VLVGILLYAMKRGPMGTGRG-GRGGGLFSVGETTA 260
Query: 185 PSLESN--TKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
L++N +F+DV G +EAK E+ E V++L++PK++ T+
Sbjct: 261 KILKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTL 320
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
LA+A AGEA VPF + +GSEF EMFVGVG RVRD+F+ A+K +PCI+FIDEIDAIG R
Sbjct: 321 LAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKR 380
Query: 303 NPKD---QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
Q + TLNQ+LVE+DGF ++V+A TN P+ LD AL RPGRFDR I +
Sbjct: 381 GRGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIG 440
Query: 360 NPDVEGRRQIMESHMSKVLKADDV---DLMI--IARGTPGFSGADLANLVNIXXXXXXXX 414
PD++GR I + H+ + LK D+ D + +A TPGF+GAD++N+ N
Sbjct: 441 PPDIKGRSSIFKVHL-RPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALIAARH 499
Query: 415 XXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKAT 474
V E A ++++ G E+K+ V+ + A+HE GHA+V + A P+ K +
Sbjct: 500 LSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVS 559
Query: 475 IVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQ 534
I+PRG LG LP +++ +R+Q+ R+ + +GGRVAE+L FG+ +T+GA DL++
Sbjct: 560 IIPRGKGLGYAQYLP-REQYLYTREQLFDRMCMMLGGRVAEQLFFGQ--ITTGAQDDLRK 616
Query: 535 ATKLARAMVTKYGMSKEVGVVTHNYDDNGKSM-----STETRLLIEKEVRNFLDRAYNNA 589
T+ A A + ++GMS+++G V+ ++ G++M S T LI++EVR + AYN
Sbjct: 617 VTQSAYAQIVQFGMSEKLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRSAYNRT 676
Query: 590 KTILT 594
+LT
Sbjct: 677 LELLT 681
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 732 (262.7 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 163/413 (39%), Positives = 250/413 (60%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G+ EAKQE++E V YL+ P+++ R T+LA+A+A EA
Sbjct: 340 FRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQ 399
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYM-- 310
VPF S +GSEF EM G+GA RVRDLF KKR+PCII+IDEIDAIG R+ +
Sbjct: 400 VPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGS 459
Query: 311 ----KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGR 366
+ TLNQLLVE+DG EG++++A+TN + LDKAL+RPGRFDRHI++ P + R
Sbjct: 460 SGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAER 519
Query: 367 RQIMESHMSKV-LKADDVDL-MIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
++I E H+S V L++ +AR TPGFSGAD+AN+ N V+ +L
Sbjct: 520 KEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNL 579
Query: 425 EYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR-GMSLG 483
EYA ++++ G+E++S +S RK+ A+HE GHALV + + K TIVPR ++LG
Sbjct: 580 EYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALG 639
Query: 484 MVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMV 543
AQ ++ S++++ ++ + +GGR AE L+F N +T+GA +DL++ TK+A + +
Sbjct: 640 F-AQYTPSEQHLYSKEELFDKMCMALGGRAAENLVF--NRITTGAQNDLEKVTKIAYSQI 696
Query: 544 TKYGMSKEVG-VVTHNYDDN--GKSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
K+GM+ +G + + D+ G +M + + + + + +D N A+ ++
Sbjct: 697 KKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMID---NEARHVV 746
Score = 498 (180.4 bits), Expect = 9.1e-51, Sum P(3) = 9.1e-51
Identities = 113/300 (37%), Positives = 179/300 (59%)
Query: 311 KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIM 370
+ TLNQLLVE+DG EG++++A+TN + LDKAL+RPGRFDRHI++ P + R++I
Sbjct: 464 EQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIF 523
Query: 371 ESHMSKV-LKADDVDL-MIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
E H+S V L++ +AR TPGFSGAD+AN+ N V+ +LEYA
Sbjct: 524 EKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAV 583
Query: 429 DKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR-GMSLGMVAQ 487
++++ G+E++S +S RK+ A+HE GHALV + + K TIVPR ++LG AQ
Sbjct: 584 ERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGF-AQ 642
Query: 488 LPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYG 547
++ S++++ ++ + +GGR AE L+F N +T+GA +DL++ TK+A + + K+G
Sbjct: 643 YTPSEQHLYSKEELFDKMCMALGGRAAENLVF--NRITTGAQNDLEKVTKIAYSQIKKFG 700
Query: 548 MSKEVG-VVTHNYDDN---------GKS-MSTETRLLIEKEVRNFLDRAYNNAKTILTMH 596
M+ +G + + D+ GK S +I+ E R+ + AY + ILT H
Sbjct: 701 MNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTH 760
Score = 42 (19.8 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 79 LVKVDRLD--DSELLKTLQKGIANSARDEESIGGISAFKNVGKPTKDGVLGTAS 130
++ +D +D + T G +S E+++ + + G TK+GVL AS
Sbjct: 436 IIYIDEIDAIGRQRSGTESMGQGSSGESEQTLNQLLVEMD-GMATKEGVLMLAS 488
Score = 39 (18.8 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 23/110 (20%), Positives = 43/110 (39%)
Query: 18 RFQSNY---VGSLARRVRDADEASEVAHLRELYRRNDPEAVIRLFESQPSLHSNQSALSE 74
+ Q+ Y VG +AR ++ + + HLR L P + + H E
Sbjct: 48 QLQAEYKAIVGLIARSLQLTPKEVRLMHLRSLSSTAKPPTAS---DGKTEKHEQP----E 100
Query: 75 YVKALVKVDRLDDSELLKTLQKGIANS-ARDEESIGGISAFKNVGKPTKD 123
A K D + + + G +S A +E+ ++ +G+P +D
Sbjct: 101 KGSAKAKDDSSKEKKSAVAAEDGDKSSRAAGDEAASTPTSSSTIGEPGED 150
Score = 37 (18.1 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 129 ASAPIHMVAAEGGHFKEQL 147
+S HM A+ F+E+L
Sbjct: 244 SSTIFHMAVADANKFEEKL 262
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 173/440 (39%), Positives = 258/440 (58%)
Query: 171 RGISKGLGLHEEVQPSLESNTK--FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXX 228
RGI +G + + S K F DV G +EAKQE+ E VH+L++PK++
Sbjct: 303 RGIFN-IGKAQITRADKNSKNKIYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPK 361
Query: 229 XXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPC 288
T+LA+A AGE+ VPF S SGS+F EMFVGVG RVR+LF A++ +P
Sbjct: 362 GALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 421
Query: 289 IIFIDEIDAIGGSRN----PKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDK 344
IIFIDEIDAIG +R + TLNQLLVE+DGF G++V+A TN P+ LDK
Sbjct: 422 IIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDK 481
Query: 345 ALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMI---IARGTPGFSGADLA 401
AL+RPGRFDR I + PD++GR QI + ++ K+ K D +A TPGF+GAD+A
Sbjct: 482 ALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKI-KLDHEPSYYSQRLAALTPGFAGADIA 540
Query: 402 NLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVA 461
N+ N VTMA + A D+++ G E+K+ VIS R+ A+HE GHA+
Sbjct: 541 NVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAG 600
Query: 462 VHTDGALPVHKATIVPRGMS-LGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFG 520
+ A P+ K TIVPRG + LG +P+++ ++++Q+ + +GGR AE+++ G
Sbjct: 601 WFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLIG 659
Query: 521 ENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVT--HNYDDNGKSMSTETRLLIEKEV 578
+++GA +DL++ TK+ A V YG S ++G+++ D+ K S T +I++EV
Sbjct: 660 R--ISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQREDEFSKPYSNRTGAMIDEEV 717
Query: 579 RNFLDRAYNNAKTILTMHSK 598
R ++ +AY ++ H +
Sbjct: 718 REWVGKAYKRTVELIEEHKE 737
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 196/547 (35%), Positives = 299/547 (54%)
Query: 74 EYVKALVKVDRLD--DSELLKTLQK-GIANSARDEESIGGISAFKNVGKPTKDGVLG--- 127
+Y A VDRL+ + + ++ + G + SIG + F+ T LG
Sbjct: 175 QYYLARGLVDRLEVVNKQFVRVIPAPGTSLEKYAWFSIGSVDTFER-NLETAQWELGIEP 233
Query: 128 -TASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKG--LGLHEEVQ 184
+A ++ ++G F L T+ I + FL G + RG G G+ E +
Sbjct: 234 PNQTAVVYTTESDGT-FLRSLVPTLLLIGI-FLYAMRRGPMGAGRGGRGGRLFGIGETIA 291
Query: 185 PSLESN--TKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
++ + +F+DV G +EAK E+ E V++L++PK++ T+
Sbjct: 292 KIIKDDIGVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTL 351
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
LA+A AGEAGVPF + +GSEF EMFVGVG RVRD+F+ A+K +PCI+F+DEIDAIG R
Sbjct: 352 LAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKR 411
Query: 303 NPKD---QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
Q + TLNQLLVE+DGF ++V+A TN P+ LD AL+RPGRFDR I +
Sbjct: 412 GRGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIG 471
Query: 360 NPDVEGRRQIMESHMSKVLKADDV---DLMI--IARGTPGF--SGADLANLVNIXXXXXX 412
PD++GR I H+ + LK D+ D + +A TPGF SGAD++N+ N
Sbjct: 472 PPDIKGRSSIFRVHL-RPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAA 530
Query: 413 XXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHK 472
V E A ++++ G E+K+ V+ + A+HE GHA+V + A P+ K
Sbjct: 531 RHLNPSVGEKHFEQAIERVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFLEHADPLLK 590
Query: 473 ATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDL 532
+IVPRG LG LP +++ +R+Q+ R+ +GGRVAE+L FG VT+GA DL
Sbjct: 591 VSIVPRGKGLGYAQCLP-REQYLYTREQLFDRMCAMLGGRVAEQLFFGR--VTTGAQDDL 647
Query: 533 QQATKLARAMVTKYGMSKEVGVVTHNYDDNGKSM-----STETRLLIEKEVRNFLDRAYN 587
++ T+ A A + ++GMS+++G V+ + G+++ S T LI++EVR + A+
Sbjct: 648 RKVTQSAYAQIVQFGMSEKLGQVSFDLPRPGEALVEKPFSEATAQLIDEEVRRLIGSAHA 707
Query: 588 NAKTILT 594
+LT
Sbjct: 708 RTLDLLT 714
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 185/511 (36%), Positives = 278/511 (54%)
Query: 107 SIGGISAF-KNVGKPTKD-GVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLI--- 161
+IG + F +N+ ++ G+ G P+ +A G F + T IA I
Sbjct: 6 NIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTALIIAFLLYTIRRG 65
Query: 162 -SGVGALIEDRGISKGLGLHEEVQPSL--ESNTKFSDVKGVDEAKQELEEIVHYLRDPKR 218
+G+G RG+ + E L E + KF DV G +EAK E+ E V++L++PK+
Sbjct: 66 PAGIGR--SGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQ 123
Query: 219 FTRXXXXXXXXXXXXXXX-XXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRD 277
+ T+LA+A AGEA VPF + SGSEF EMFVGVG RVRD
Sbjct: 124 YQDLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRD 183
Query: 278 LFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIA 334
LF+ A+K +PCI+FIDEIDA+G R N Q + TLNQLLVE+DGF ++++A
Sbjct: 184 LFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILA 243
Query: 335 ATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADD-VDLMIIARG-- 391
TN P+ LD AL+RPGRFDR I + PD++GR I + H+ + LK D ++ +AR
Sbjct: 244 GTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHL-RPLKLDSTLEKEKLARKLA 302
Query: 392 --TPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKL 449
TPGFSGAD+AN+ N + E A ++++ G E+K+ V+ E +K
Sbjct: 303 SLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKT 362
Query: 450 TAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISRKQMLARLDVCM 509
A+HE GHA+ + + A P+ K +I+PRG LG LP K++ +++Q+L R+ +
Sbjct: 363 VAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRMCMTP 421
Query: 510 GGRVA-EELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTHNYDDNG----- 563
G + FG +T+GA D ++ T+ A A + ++GM+++VG ++ + G
Sbjct: 422 GWPCGPRKSSFGR--ITTGAQDD-RKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLE 478
Query: 564 KSMSTETRLLIEKEVRNFLDRAYNNAKTILT 594
K S T LI+ EVR ++ AY +LT
Sbjct: 479 KPYSEATARLIDDEVRILINDAYKRTVALLT 509
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 717 (257.5 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 159/424 (37%), Positives = 242/424 (57%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
V + F DV G+ EAK E++E V YL+ P+RF + T+
Sbjct: 298 VDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTL 357
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
LA+A+A EA VPF + +G EF E+ G+GA RVR LF A+ R+PCI++IDEIDA+G R
Sbjct: 358 LAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKR 417
Query: 303 NPKDQQYM----KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
+ + + TLNQLLVE+DG + +IV+AATN + LD AL+RPGR DRH+ +
Sbjct: 418 STAVSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFI 477
Query: 359 PNPDVEGRRQIMESHMS--KVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
P ++ R++I E H+ K+ +A +A TPGFSGAD+AN+ N
Sbjct: 478 DLPTLQERKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREGH 537
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
V ++L+YA ++++ G+ +KS V+S E +K+ AFHE GHALV + V K +I
Sbjct: 538 TAVHTSNLDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIT 597
Query: 477 PR-GMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQA 535
PR +LG LP +D+ +R+Q+ R+ + +GGR +E + F N VTSGA DL++
Sbjct: 598 PRTNAALGFAQMLP-RDQHLFTREQLFERMCMALGGRASESISF--NRVTSGAQDDLRKV 654
Query: 536 TKLARAMVTKYGMSKEVGVVTHNYDDNG------KSMSTETRLLIEKEVRNFLDRAYNNA 589
T++A +MV ++GM+ +G V+ G + S + +I+ E R + AY +
Sbjct: 655 TRIAYSMVKQFGMAPSIGPVSFPEAQEGVTGIGRRPFSQGLQQMIDHEARLLVATAYRHT 714
Query: 590 KTIL 593
+ +L
Sbjct: 715 EQVL 718
Score = 37 (18.1 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 561 DNGKSMSTETRLLIEKEVRNFLD 583
DN + L+EKEV N+ D
Sbjct: 720 DNLDKLHALASALLEKEVINYED 742
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 706 (253.6 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 155/424 (36%), Positives = 243/424 (57%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
V + F DV G+ EAK E++E V YL+ P+RF + T+
Sbjct: 298 VDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTL 357
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
LA+A+A EA VPF + +G EF E+ G+GA RVR LF A+ R+PCI++IDEIDA+G R
Sbjct: 358 LAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKR 417
Query: 303 NPKDQQYM----KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
+ + + TLNQLLVE+DG + +IV+A+TN + LD AL+RPGR DRH+ +
Sbjct: 418 STTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFI 477
Query: 359 PNPDVEGRRQIMESHMS--KVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
P ++ RR+I E H+ K+ +A +A TPGFSGAD+AN+ N
Sbjct: 478 DLPTLQERREIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAREGH 537
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
V + EYA ++++ G+ +KS ++S E +K+ AFHE GHALV + V K +I
Sbjct: 538 TSVHTFNFEYAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIA 597
Query: 477 PR-GMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQA 535
PR +LG LP +D+ +++Q+ R+ + +GGRV+E + F N+VTSGA DL++
Sbjct: 598 PRTNAALGFAQMLP-RDQHLFTKEQLFERMCMALGGRVSETISF--NKVTSGAQDDLRKV 654
Query: 536 TKLARAMVTKYGMSKEVGVVTHNYDDNG------KSMSTETRLLIEKEVRNFLDRAYNNA 589
T++A +MV ++GM+ +G ++ G + S + +++ E + + +AY +
Sbjct: 655 TRIAYSMVKQFGMAPSIGPISFPEVQEGLTGIGRRPFSQGLQQMMDHEAKLLVAKAYRHT 714
Query: 590 KTIL 593
+ +L
Sbjct: 715 EKVL 718
Score = 39 (18.8 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 561 DNGKSMSTETRLLIEKEVRNFLD 583
DN + L+EKEV N+ D
Sbjct: 720 DNLDKLQALANALLEKEVINYED 742
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 696 (250.1 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 153/413 (37%), Positives = 241/413 (58%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G+ EAK E++E V YL++P R+ + T+LA+A+A EA
Sbjct: 281 FKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQ 340
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYM-- 310
VPF + +GSEF E+ G+GA RVR LF A+ R+PCI++IDEIDA+G R+ +
Sbjct: 341 VPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVSGFANA 400
Query: 311 --KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+ TLNQLLVE+DG + +IV+A+TN + LD AL+RPGR DRHI + P ++ RR+
Sbjct: 401 EEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQERRE 460
Query: 369 IMESHMSKVLKADDVDLMI--IARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
I E H+ + D +A TPGFSGAD+AN+ N + + EY
Sbjct: 461 IFEQHLKGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFNFEY 520
Query: 427 AKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR-GMSLGMV 485
A ++++ G+ +++ ++S E RK+ AFHE GHALV + V K +I PR +LG
Sbjct: 521 AVERVIAGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFA 580
Query: 486 AQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTK 545
LP +++ +++Q+L R+ + +GGRV+E + F N+VT+GA DL++ TK+A +MV +
Sbjct: 581 QILP-REQYLFTKEQLLERMCMALGGRVSEAITF--NKVTTGAQDDLKRVTKIAYSMVKQ 637
Query: 546 YGMSKEVGVVTHNYDDN--G---KSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
YGM +G ++ ++ G + S + +++ E + + +AY + +L
Sbjct: 638 YGMVPSIGQISFPDGESTVGIGRRPFSQGLQQMMDHEAKVLVAQAYRRTEKLL 690
Score = 46 (21.3 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 561 DNGKSMSTETRLLIEKEVRNFLD 583
DN + T + L+EKEV N+ D
Sbjct: 692 DNRDKLQTLSNALLEKEVINYDD 714
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 164/376 (43%), Positives = 225/376 (59%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F+DV GVDEAK+ELEEIV +LR+P+++ R T+LA+A+AGEA
Sbjct: 324 FADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAE 383
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK----DQQ 308
VPF SCS SEF E++VG+GA RVRDLF+ AKK +P IIFIDEIDA+ SR+ K
Sbjct: 384 VPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSND 443
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+ TLNQLL E+DGF N +IV+ ATN + LD AL RPGRFDR + V PD GR
Sbjct: 444 EREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRES 503
Query: 369 IMESHMSK--VLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
I+ H+SK + DDV+L IA T GF+GADLANLVN V D
Sbjct: 504 ILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQ 563
Query: 427 AKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGAL---P-VHKATIVPR-GMS 481
A ++ + G E+KSA + + + A HE GHA+V L P V K +I+PR G +
Sbjct: 564 AVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGA 623
Query: 482 LGMVAQLP-DKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLAR 540
LG P +D + ++L RL +GGR AEE+++ +++GA D+++AT +A
Sbjct: 624 LGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYS-GRISTGAFDDIRRATDMAY 682
Query: 541 AMVTKYGMSKEVGVVT 556
V +YG+++++G V+
Sbjct: 683 KAVAEYGLNQKIGPVS 698
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 690 (248.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 152/414 (36%), Positives = 237/414 (57%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G+ EAK E+ E V YL+ P+RF + T+LA+A+A EA
Sbjct: 308 FQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQ 367
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYM-- 310
VPF + +G EF E+ G+GA RVR LF A+ R+PCI++IDEIDA+G R+ +
Sbjct: 368 VPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNT 427
Query: 311 --KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+ TLNQLLVE+DG + +IV+A+TN + LD AL+RPGR DRH+ + P ++ RR+
Sbjct: 428 EEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERRE 487
Query: 369 IMESHMS--KVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
I E H+ K+ + +A TPGFSGAD+AN+ N V + EY
Sbjct: 488 IFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEY 547
Query: 427 AKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR-GMSLGMV 485
A ++++ G+ +KS ++S E +++ AFHE GHALV + V K +I PR +LG
Sbjct: 548 AVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFS 607
Query: 486 AQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTK 545
LP +D+ +++Q+ R+ + +GGR AE + F + VTSGA DL++ T++A +MV +
Sbjct: 608 QMLP-RDQYLFTKEQLFERMCMALGGRAAEAISF--SRVTSGAQDDLRKVTRIAYSMVKQ 664
Query: 546 YGMSKEVGVVTHNYDDNG------KSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
+GM+ +G V+ G + S + +++ E + + +AY + + +L
Sbjct: 665 FGMAPSIGPVSFPEAQEGLMGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVL 718
Score = 39 (18.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 561 DNGKSMSTETRLLIEKEVRNFLD 583
DN + L+EKEV N+ D
Sbjct: 720 DNLDKLQALANALLEKEVINYED 742
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 156/424 (36%), Positives = 241/424 (56%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
V + F DV G+ EAK E+ E V YL+ P+RF + T+
Sbjct: 298 VDGKMGKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTL 357
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
LA+A+A EA VPF + +G EF E+ G+GA RVR LF A+ R+PCI++IDEIDA+G R
Sbjct: 358 LAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKR 417
Query: 303 NPKDQQYM----KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
+ + + TLNQLLVE+DG + +IV+A+TN + LD AL+RPGR DRH+ +
Sbjct: 418 STTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFI 477
Query: 359 PNPDVEGRRQIMESHMS--KVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXX 416
P ++ RR+I E H+ K+ ++ +A TPGFSGAD+AN+ N
Sbjct: 478 DLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGH 537
Query: 417 XXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIV 476
V + EYA ++++ G+ +KS ++S E +K+ AFHE GHALV + V K +I
Sbjct: 538 TSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSIT 597
Query: 477 PR-GMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQA 535
PR +LG LP +D+ +++Q+ R+ + +GGR +E L F NEVTSGA DL++
Sbjct: 598 PRTNAALGFAQMLP-RDQHLFTKEQLFERMCMALGGRASEALSF--NEVTSGAQDDLRKV 654
Query: 536 TKLARAMVTKYGMSKEVGVVTHNYDDNG------KSMSTETRLLIEKEVRNFLDRAYNNA 589
T++A +MV ++GM+ +G ++ G + S + +++ E R + +AY +
Sbjct: 655 TRIAYSMVKQFGMAPGIGPISFPEAQEGLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHT 714
Query: 590 KTIL 593
+ +L
Sbjct: 715 EKVL 718
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 161/376 (42%), Positives = 228/376 (60%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F+DV GVDEAK+ELEEIV +L++P R+ R T+LA+A+AGE+
Sbjct: 328 FADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESD 387
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK----DQQ 308
VPF SCS SEF E++VG+GA RVRDLF+ AKK +P IIFIDEIDA+ SR+ K
Sbjct: 388 VPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSND 447
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+ TLNQLL E+DGF + +IV+ ATN + LD AL RPGRFDR + V +PD GR
Sbjct: 448 EREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRES 507
Query: 369 IMESHMSK--VLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
I++ H+SK + DDV+L IA T GF+GADLANLVN V D +
Sbjct: 508 ILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIH 567
Query: 427 AKDKIMMGSERKSAVISDESRKLTAFHEGGHALV--AVHT--DGALPVHKATIVPR-GMS 481
A ++ + G E+K+A + + + A HE GHA+V AV + G V K +I+PR G +
Sbjct: 568 AVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGA 627
Query: 482 LGMVAQLPD-KDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLAR 540
LG P +D + ++ RL +GGR AEE+++ +++GA D+++AT +A
Sbjct: 628 LGFTYIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYS-GRISTGALDDIRRATDMAY 686
Query: 541 AMVTKYGMSKEVGVVT 556
V +YG+++++G V+
Sbjct: 687 KAVAEYGLNEKIGPVS 702
Score = 268 (99.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 77/229 (33%), Positives = 123/229 (53%)
Query: 381 DDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSA 440
DDV+L IA T GF+GADLANLVN V D +A ++ + G E+K+A
Sbjct: 522 DDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEKKTA 581
Query: 441 VISDESRKLTAFHEGGHALV--AVHT--DGALPVHKATIVPR-GMSLGMVAQLPD-KDET 494
+ + + A HE GHA+V AV + G V K +I+PR G +LG P +D
Sbjct: 582 RLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHEDRY 641
Query: 495 SISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGV 554
+ ++ RL +GGR AEE+++ +++GA D+++AT +A V +YG+++++G
Sbjct: 642 LLFIDELHGRLVTLLGGRAAEEVVYS-GRISTGALDDIRRATDMAYKAVAEYGLNEKIGP 700
Query: 555 VT------HNYDDNGKSM--STETRL--LIEKEVRNFLDRAYNNAKTIL 593
V+ DD+G S + L L+++EV N L A + A T++
Sbjct: 701 VSVATLSAGGIDDSGGSPWGRDQGHLVDLVQREVTNLLQSALDVALTVV 749
Score = 42 (19.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 21/84 (25%), Positives = 35/84 (41%)
Query: 19 FQSNYVGSLARRVRDADEASEVAHLRELYRRNDPEAVIRLFESQPSLHSNQSALSEYVKA 78
F YVG A RVRD ++ + ++ +AV + + + + SN +
Sbjct: 398 FVELYVGMGASRVRDLFARAK-KEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQL 456
Query: 79 LVKVDRLDDSELLKTLQKGIANSA 102
L ++D D S + L G N A
Sbjct: 457 LTEMDGFDSSSAVIVL--GATNRA 478
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 165/387 (42%), Positives = 222/387 (57%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
V+ + KF DV G EAK E+ E V YL++P RFT+ T+
Sbjct: 274 VEGKKQLKIKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTL 333
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
LA+A+A E+ VPF S +GSEF E+ G+GA R+R LF A+ R+PCII+IDEIDAIG R
Sbjct: 334 LAKALAAESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKR 393
Query: 303 NPK---------DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFD 353
+ + TLNQLLVE+DG G++V+A+TN + LDKAL+RPGRFD
Sbjct: 394 SEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFD 453
Query: 354 RHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMI---IARGTPGFSGADLANLVNIXXXX 410
RHI + P V R+ + E +M K+ K D +A TPGF+GAD+ N+ N
Sbjct: 454 RHISIDLPTVLERKDMFELYMRKI-KLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIR 512
Query: 411 XXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVA---VHTDGA 467
VT D+EYA D+++ GSE++S + +E R++ A+HE GHALV HTD
Sbjct: 513 AASNKCHVVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDAL 572
Query: 468 LPVHKATIVPR-GMSLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTS 526
L K TI+PR +LG AQ +D+ S+ ++ R+ + +GGR AE L FG TS
Sbjct: 573 L---KVTIIPRTSAALGF-AQYSPRDKHLFSKDELFDRMCMMLGGRCAENLKFGR--ATS 626
Query: 527 GASSDLQQATKLARAMVTKYGMSKEVG 553
GA DLQ+ TK A A V YGMS VG
Sbjct: 627 GAQDDLQKVTKSAYAQVKLYGMSSIVG 653
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 159/415 (38%), Positives = 243/415 (58%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G+ EAK E++E V YL++P R+ + T+LA+A+A EA
Sbjct: 299 FKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEAQ 358
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYM-- 310
VPF + +GSEF E+ G+GA RVR LF A+ R+PCI++IDEIDA+G R+ +
Sbjct: 359 VPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMSGFSNT 418
Query: 311 --KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+ TLNQLLVE+DG + +IV+A+TN + LD AL+RPGR DRHI + P ++ R++
Sbjct: 419 EEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERKE 478
Query: 369 IMESHMSKVLK----ADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
I E H+ K+LK AD L + A TPGFSGAD+AN+ N +
Sbjct: 479 IFEQHL-KILKLTQPADFYSLRL-AELTPGFSGADIANICNEAALHAAREGFKSIDTFSF 536
Query: 425 EYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR-GMSLG 483
EYA ++++ GS +KS ++S E +++ AFHE GHALV + V K +I PR +LG
Sbjct: 537 EYAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALG 596
Query: 484 MVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMV 543
LP +D+ +++Q+ R+ + +GGR +E + F N+VT+GA DL++ T++A +MV
Sbjct: 597 FAQILP-RDQFLFTKEQLFERMCMALGGRASEAITF--NKVTTGAQDDLRKVTRVAYSMV 653
Query: 544 TKYGMSKEVGVVTHNYDDN--G---KSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
+YGM VG V+ +N G + S + ++ E + + +AY + + +L
Sbjct: 654 KQYGMVDSVGQVSFPDSENQSGIGRRPFSQGLQQQMDLEAKMLIAKAYRHTEKLL 708
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 418 (152.2 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 90/211 (42%), Positives = 126/211 (59%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G+ EAK E+ E V YL+ P+RF + T+LA+A+A EA
Sbjct: 308 FQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQ 367
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYM-- 310
VPF + +G EF E+ G+GA RVR LF A+ R+PCI++IDEIDA+G R+ +
Sbjct: 368 VPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNT 427
Query: 311 --KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+ TLNQLLVE+DG + +IV+A+TN + LD AL+RPGR DRH+ + P ++ RR+
Sbjct: 428 EEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERRE 487
Query: 369 IMESHMS--KVLKADDVDLMIIARGTPGFSG 397
I E H+ K+ + +A TPGFSG
Sbjct: 488 IFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 235 (87.8 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 55/167 (32%), Positives = 95/167 (56%)
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR-GMSLGMVAQLPDKD 492
G+ +KS ++S E +++ AFHE GHALV + V K +I PR +LG LP +D
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLP-RD 576
Query: 493 ETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEV 552
+ +++Q+ R+ + +GGR AE + F + VTSGA DL++ T++A +MV ++GM+ +
Sbjct: 577 QYLFTKEQLFERMCMALGGRAAEAISF--SRVTSGAQDDLRKVTRIAYSMVKQFGMAPSI 634
Query: 553 GVVTHNYDDNG------KSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
G V+ G + S + +++ E R + RAY + + +L
Sbjct: 635 GPVSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVL 681
Score = 39 (18.8 bits), Expect = 6.6e-39, Sum P(2) = 6.6e-39
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 561 DNGKSMSTETRLLIEKEVRNFLD 583
DN + L+EKEV N+ D
Sbjct: 683 DNLDKLQALANALLEKEVINYED 705
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 418 (152.2 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 90/211 (42%), Positives = 126/211 (59%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV G+ EAK E+ E V YL+ P+RF + T+LA+A+A EA
Sbjct: 308 FQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQ 367
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYM-- 310
VPF + +G EF E+ G+GA RVR LF A+ R+PCI++IDEIDA+G R+ +
Sbjct: 368 VPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNT 427
Query: 311 --KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+ TLNQLLVE+DG + +IV+A+TN + LD AL+RPGR DRH+ + P ++ RR+
Sbjct: 428 EEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERRE 487
Query: 369 IMESHMS--KVLKADDVDLMIIARGTPGFSG 397
I E H+ K+ + +A TPGFSG
Sbjct: 488 IFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 235 (87.8 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 55/167 (32%), Positives = 95/167 (56%)
Query: 434 GSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR-GMSLGMVAQLPDKD 492
G+ +KS ++S E +++ AFHE GHALV + V K +I PR +LG LP +D
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLP-RD 576
Query: 493 ETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEV 552
+ +++Q+ R+ + +GGR AE + F + VTSGA DL++ T++A +MV ++GM+ +
Sbjct: 577 QYLFTKEQLFERMCMALGGRAAEAISF--SRVTSGAQDDLRKVTRIAYSMVKQFGMAPSI 634
Query: 553 GVVTHNYDDNG------KSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
G V+ G + S + +++ E R + RAY + + +L
Sbjct: 635 GPVSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVL 681
Score = 39 (18.8 bits), Expect = 6.6e-39, Sum P(2) = 6.6e-39
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 561 DNGKSMSTETRLLIEKEVRNFLD 583
DN + L+EKEV N+ D
Sbjct: 683 DNLDKLQALANALLEKEVINYED 705
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 604 (217.7 bits), Expect = 2.8e-58, P = 2.8e-58
Identities = 153/388 (39%), Positives = 212/388 (54%)
Query: 189 SNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
+ KF+DV G+DEA EL+E+V YL++P F + T++A+AIA
Sbjct: 425 TGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIA 484
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNP---- 304
GEAGVPF+ +GSEF E+ VGVG+ R+RDLF AK P +IFIDEIDA+ R
Sbjct: 485 GEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKE 544
Query: 305 -KDQQY------MKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
DQ Y + TLNQLL+ELDGF +G+I + ATN + LD AL+RPGRFDR I
Sbjct: 545 NSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIR 604
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXX 417
V P+ +GR I++ H SKV +D VDL A PG+SGA LA LV
Sbjct: 605 VRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHN 664
Query: 418 XVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGG-----HALVAVHTDGALPVHK 472
+ +D++ A D++ +G R + + + A E G H L+ +
Sbjct: 665 SILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAKIERCDR 724
Query: 473 ATIVPRGMSLGMVA--QLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASS 530
+I+PRG +L V +L D+ Q+L RL V +GGR AEE+I+G + TS AS
Sbjct: 725 VSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRLQVLLGGRAAEEVIYGSD--TSKASV 782
Query: 531 D-LQQATKLARAMVTKYGMSKEVGVVTH 557
D L A+ LAR ++T + + E +V H
Sbjct: 783 DYLSDASWLARKILTIWNL--ENPMVIH 808
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 551 (199.0 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
Identities = 151/413 (36%), Positives = 218/413 (52%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAG 249
+ KF+DV G+ + + ELEEIV + + + R T+LA+A+AG
Sbjct: 406 DVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAG 465
Query: 250 EAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN---PKD 306
EAGV FFS S S+F E++VGVGA RVR L+ A++ +P ++FIDE+DA+G R
Sbjct: 466 EAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSG 525
Query: 307 QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGR 366
Q TLNQLLV LDGF+ +I IA+TN P+ LD ALVRPGRFDR I +P P + GR
Sbjct: 526 GQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 585
Query: 367 RQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
+I++ H K A+D+D M +A T G GA+LAN+V I +T DL
Sbjct: 586 MEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRTELTTDDLLQ 645
Query: 427 AKDKIMMGS-ERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPR-GMSLGM 484
A G +RK + E+ + A +E A+VAV+ + TI PR G LG
Sbjct: 646 AAQIEERGMLDRKDRSL--ETWRQVAINEAAMAVVAVNFPDMKNIEFLTINPRAGRELGY 703
Query: 485 VAQLPDK---DETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARA 541
V D E +SR+ +L + V + R A+EL +GE+++++ + A AR+
Sbjct: 704 VRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLSTIWAETSDNARSAARS 763
Query: 542 MVTKYGMSKEVGVVTHNYDDNGKSMSTETRLL-IEKEVRNFLDRAYNNAKTIL 593
+V G+S + H+ +N R+ I+ E L+ Y AK IL
Sbjct: 764 LVLG-GLSDK-----HHGLNN---FWVADRINDIDVEALRILNMCYERAKEIL 807
Score = 58 (25.5 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 17 RRFQSNYVGSLARRVRDADEASEVAHL-REL--YRRNDPEAVIRLFESQPSLHSNQSALS 73
R+ + +Y L +ADE ++ L RE+ D E E P L Q A+
Sbjct: 325 RKQKKDYEDRLKIEKAEADERKKMRELEREMEGIEEEDEEVEEGTGEKNPYL---QMAM- 380
Query: 74 EYVKALVKVDRLDDSELLKTLQKGIANSARDEESIGGI 111
+++K+ +V R + L + L++G+ D +G I
Sbjct: 381 QFMKSGARVRRASNKRLPEYLERGVDVKFTDVAGLGKI 418
Score = 41 (19.5 bits), Expect = 1.5e-54, Sum P(2) = 1.5e-54
Identities = 9/49 (18%), Positives = 24/49 (48%)
Query: 23 YVGSLARRVRDADEASEVAHLRELYRRNDPEAVIRLFESQPSLHSNQSA 71
Y+ + + +++ A+E+ +RE ++R E + + E + + A
Sbjct: 211 YMLTWVKPKKESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKTMKA 259
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 142/401 (35%), Positives = 223/401 (55%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTM 242
++P + SN F+DV GVDE K EL E+V +L++PK++ T+
Sbjct: 142 IKPVI-SNITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTL 200
Query: 243 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR 302
+A+A+AGEAGVPFF SGS F E++VG+GA+RVR+LFS AK +P I+FIDEIDA+G +R
Sbjct: 201 IAKAVAGEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKAR 260
Query: 303 NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPD 362
TLNQLL ++DGF+ N G+IVIAATN E +D AL+R GRFDR I + PD
Sbjct: 261 GEMSNVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPD 320
Query: 363 VEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMA 422
+ R +I+E +M K ++++L IA+ + GFSGA L LVN V +
Sbjct: 321 FKDRLKILEIYMKD--KNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEES 378
Query: 423 DLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSL 482
D +K+++G ++K ++E +K+ A ++ AL A + D + K T++
Sbjct: 379 DFYAVLNKVLLG-KKKILSFNNEEKKIQATYQAAKALSAYYLD--IGFEKITLIED---- 431
Query: 483 GMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAM 542
+ + + S+ +++ R+ V + G A +LI+ NE + + D + +L M
Sbjct: 432 ----RFKEYEHNIRSKSELINRIKVYLAGSRAMKLIY--NESYTNSQDDFLKIKELLDYM 485
Query: 543 VTKYGMSKEVGVVTHN--YDDNGKSMSTE----TRLLIEKE 577
++ + M +E + D+ SM + + LL+EKE
Sbjct: 486 LS-FDMLEESNLSEQKKEMDEFLNSMKDKILKLSELLLEKE 525
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 120/250 (48%), Positives = 150/250 (60%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAG 252
F DV+GVD AK EL EIV L+ + + T+LARA+AGEAG
Sbjct: 333 FDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAG 392
Query: 253 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKM 312
VPFFS S SEF E+FVG GA R+RDLF+AA+K SP IIFIDE+DA+GG R
Sbjct: 393 VPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRSFNDERDQ 452
Query: 313 TLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMES 372
TLNQLL E+DGF+ + +IVIAATN PE+LD AL RPGRF R ++V PD EGRR+I+
Sbjct: 453 TLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAI 512
Query: 373 HMSKVLKADDVDLM--IIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDK 430
H+ V +D L+ ++A TPGF GADLAN+VN V D+ A ++
Sbjct: 513 HLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDIMEAIER 572
Query: 431 IMMGSERKSA 440
G K A
Sbjct: 573 AKFGINDKEA 582
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 521 (188.5 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 139/456 (30%), Positives = 229/456 (50%)
Query: 144 KEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAK 203
+EQ+ + I + F +S V +IE + I + ++ + P+ K DV G+ AK
Sbjct: 825 QEQVGK-IENFDVSFHQLS-VNQVIESKDIQETSFFNQSL-PT----EKLDDVIGLQRAK 877
Query: 204 QELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEF 263
L +++ +++ P + T LA+A+AGE G+PFFS S SE
Sbjct: 878 NRLLDVIEWMKFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGECGLPFFSVSASEL 937
Query: 264 EEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ---QYMKMTLNQLLVE 320
+G + ++ LFS A+K +P I+FIDEIDAI R+ Q + +N LL E
Sbjct: 938 SSTIIGGSSEKIMALFSVARKYAPSIVFIDEIDAIASQRSEDSQGNSRERNAIVNTLLTE 997
Query: 321 LDGFKQNEG-IIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKV-L 378
+DGF +E + V+AATN+P+ LDKA++RPGRFD I P+ E R E K L
Sbjct: 998 MDGFSSSESPVFVMAATNYPQLLDKAILRPGRFDETIFCDLPNSEARTIFFEKFAQKQNL 1057
Query: 379 KADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERK 438
+ DL + + G S A++ ++ +T+ ++ +++ GS +
Sbjct: 1058 QWQQSDLTALVSSSQGMSSAEIDQVLR-EAIYQAVGTEKPLTIEHIKQTIVRVVYGSPSE 1116
Query: 439 SAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGMSLGMVAQLPDKDETSISR 498
+ + E ++ TAFHE H L + ATI PR SLG VA ++ S S+
Sbjct: 1117 NIKLGKEEKRRTAFHEAAHLLTYKLLFPNQIIDFATIEPRNQSLGFVATRASEEYESYSK 1176
Query: 499 KQMLARLDVCMGGRVAEELIFGE-NEVTSGASSDLQQATKLARAMVTKYGMSKEVGVVTH 557
+++ +L V + GRVAE+L +E+++GAS+D+++AT+LA + G+ + VG V
Sbjct: 1177 TRVMNKLQVLLAGRVAEKLCTNNADEISTGASNDIEKATQLAMHAIYDGGIEESVGPV-- 1234
Query: 558 NYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTIL 593
N K +E +K V+ +L A + + +L
Sbjct: 1235 NVGILTKFEESELLAKAQKAVQQWLITAEQSVEKLL 1270
Score = 45 (20.9 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 68 NQSALSEYVKALVKVDRLDDSELLKTLQKGIANSARDEE 106
N A + + ++V +D + L+K L++ IAN RD E
Sbjct: 130 NDGAYLDELFSVVLSKNIDKNRLVKDLEQFIAN--RDAE 166
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 492 (178.3 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 128/417 (30%), Positives = 207/417 (49%)
Query: 186 SLESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLAR 245
SL N+ DV G++ AK+ L E+V +L+ P++ T+LA+
Sbjct: 844 SLPDNS-LDDVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAK 902
Query: 246 AIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK 305
A+AGE +PFFS + SE G ++ LF+ A+K +P IIFIDEIDAI R
Sbjct: 903 AVAGECELPFFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQRTDN 962
Query: 306 DQQYMK---MTLNQLLVELDGFKQNE-GIIVIAATNFPESLDKALVRPGRFDRHIVVPNP 361
+ +T+N LL E+DGF E + V+AATN P+ LD A+ RPGRFD I P
Sbjct: 963 SDGSSRDKNLTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLP 1022
Query: 362 DVEGRRQIMESHMSK-VLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVT 420
+ R + SK L + +L + G S A++ ++ +T
Sbjct: 1023 NKNARLIFFKRFASKHKLNWQETELQQLVSSAQGMSSAEIDQVLR-ESIYQAVGENQQLT 1081
Query: 421 MADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHTDGALPVHKATIVPRGM 480
++ +I+ G+ + E ++ TA+HE H L P+ TI PR
Sbjct: 1082 TEHIKQTMIRIVYGAPSDHIFLGAEEKRRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQ 1141
Query: 481 SLGMVAQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGE-NEVTSGASSDLQQATKLA 539
+LG VA ++ S S+++++ +L V + GRVAE+L G+ EV++GAS+D+++AT+LA
Sbjct: 1142 ALGFVATRASEEYESYSKRRVMHKLQVLLAGRVAEKLCTGDCEEVSTGASNDIEKATQLA 1201
Query: 540 RAMVTKYGMSKEVGVVTHNYDDNGKSMSTETRLLIEKEVRNFLDRAYNNAKTILTMH 596
+ + G+ VG V N K ++ ++ V+ +LD++ + +L H
Sbjct: 1202 MHAIYEGGIEPTVGPV--NIAMLTKFEESDLLANAQQAVKQWLDQSEQQVEQLLKDH 1256
Score = 37 (18.1 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 90 LLKTLQKGIANSARDEESI 108
LL L KGIA +E I
Sbjct: 493 LLSILDKGIAQDQTSQEFI 511
>TAIR|locus:2206380 [details] [associations]
symbol:FTSH12 "FTSH protease 12" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS;IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 HSSP:Q01853
eggNOG:COG0465 GO:GO:0009535 EMBL:AC007202 GO:GO:0004176 KO:K03798
EMBL:AY035166 IPI:IPI00518515 PIR:A96827 RefSeq:NP_565212.1
UniGene:At.48395 UniGene:At.66914 ProteinModelPortal:Q9SAJ3
SMR:Q9SAJ3 STRING:Q9SAJ3 MEROPS:M41.A06 PaxDb:Q9SAJ3 PRIDE:Q9SAJ3
EnsemblPlants:AT1G79560.1 GeneID:844294 KEGG:ath:AT1G79560
GeneFarm:1828 TAIR:At1g79560 HOGENOM:HOG000090030 InParanoid:Q9SAJ3
OMA:QAVIFIC PhylomeDB:Q9SAJ3 ProtClustDB:CLSN2689328
Genevestigator:Q9SAJ3 Uniprot:Q9SAJ3
Length = 1008
Score = 425 (154.7 bits), Expect = 8.8e-39, P = 8.8e-39
Identities = 116/379 (30%), Positives = 182/379 (48%)
Query: 188 ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAI 247
E+ + + +V + L+E++ Y+ +P ++ T+ AR +
Sbjct: 487 ETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTL 546
Query: 248 AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ 307
A E+G+PF SG+EF + GA ++ ++FS A++ +P +F+DEIDAI G KD
Sbjct: 547 AKESGLPFVFASGAEFTDSEKS-GAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDP 605
Query: 308 QYMKMTLNQLLVELDGFKQNEGI---------IVIAATNFPESLDKALVRPGRFDRHIVV 358
+ + T L+ +LDG K+ GI I I ATN P+ LD VR GR DR + +
Sbjct: 606 R-RRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYI 664
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD + R QI H + A+D+D + T GFSGAD+ NLVN
Sbjct: 665 GLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSY 724
Query: 419 VTMADLEYAKDK-------IMMGSERKSAV---ISDESRKLTAFHEGGHALVAVHTDGAL 468
+ D+ DK +++ E + +S E ++L A HE GH ++A H
Sbjct: 725 IYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLA-HLFPRF 783
Query: 469 PVHK-ATIVPRGMSLGMVAQLPDKDETS---ISRKQMLARLDVCMGGRVAEELIFGENEV 524
H + ++P G + P +D + M ++ V GGR AE ++FG+N V
Sbjct: 784 DWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGDN-V 842
Query: 525 TSGASSDLQQATKLARAMV 543
T G DL++ TK+AR MV
Sbjct: 843 TDGGKDDLEKITKIAREMV 861
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 97/260 (37%), Positives = 141/260 (54%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N ++ D+ G+++ QE+ E+V L+ P+ F + T+LA+A+A
Sbjct: 166 NVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA 225
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK--- 305
E F GSE + F+G GA V+D+F AK+++P IIFIDEIDAI R
Sbjct: 226 TETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG 285
Query: 306 -DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D++ + TL QLL E+DGF + +I ATN P+ LD A++RPGRFDR I VP PD +
Sbjct: 286 GDREVQR-TLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEK 344
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
GR +I++ H K+ A+DV+L IA+ T G GA+L + VTM D
Sbjct: 345 GRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDF 404
Query: 425 EYAKDKIMMGSERKSAVISD 444
A +KIM E+K + +
Sbjct: 405 RKAVEKIM---EKKKVKVKE 421
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 413 (150.4 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 125/379 (32%), Positives = 189/379 (49%)
Query: 188 ESNTKFSDVKGVDEAKQELEEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAI 247
++ F D G + K+EL+EIV L++ + F T+LA+AI
Sbjct: 310 KTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAI 369
Query: 248 AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD- 306
AGEAG+PFF+ +G++F EMFVGV A RV+DLF++++ +P IIFIDEIDAIG R D
Sbjct: 370 AGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDI 429
Query: 307 ---QQYMKMTLNQLLVELDGFKQNEG-IIVIAATNFPESLDKALVRPGRFDRHIVVPNPD 362
+ L Q+L E+DGFK ++VI ATN + LD AL+R GRFD+ I V P
Sbjct: 430 GGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPS 489
Query: 363 VEGRRQIMESHM-SKVLKADDVD---LMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
+GR I++ H +K +++D L +A T F+GA+L N++N
Sbjct: 490 KDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGILTARKDLDY 549
Query: 419 VTMADLEYA----KDKIMMGSERKSAVISDESRKLTAFHEGGHALVAVHT-DGALPVHKA 473
+ +L A K G E S + +E + A+ E A++A + D P+ +
Sbjct: 550 IGREELLEALKRQKGTFETGQE-DSTEVPEELKLRLAYREAAVAVLACYLPDQYRPISET 608
Query: 474 TIVPRGMSLGMVAQLPDKDETSISRKQMLAR--LDVCMGGRVAEELIFG-ENEVTSGASS 530
I M + + +RK + C RV EE +FG EN A S
Sbjct: 609 DINSIRSQPNM--RYSETSGRVFARKSDYVNSIIRAC-APRVVEEEMFGIENLCWISAKS 665
Query: 531 DLQQATKLARAMVTKYGMS 549
L+ A++ A ++ + GM+
Sbjct: 666 TLE-ASQRAEFLILQTGMT 683
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 380 (138.8 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 97/284 (34%), Positives = 148/284 (52%)
Query: 160 LISGVGALIEDRGISKGLGLHEEVQP-----SLES--NTKFSDVKGVDEAKQELEEIVHY 212
L+ GV ++ ++ L EV P S+E + F+ V G++E +EL E++
Sbjct: 91 LVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIEL 150
Query: 213 -LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVG 271
L++P+ F R T+LARA+A GV F S + ++G
Sbjct: 151 PLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGES 210
Query: 272 ARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NPKDQQYMKMTLNQLLVELDGFKQN 327
AR +R++F AK+ PC+IF+DEIDAIGG R D++ + TL +LL ++DGF
Sbjct: 211 ARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQR-TLMELLNQMDGFDYL 269
Query: 328 EGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMI 387
+I ATN P++LD AL+RPGR DR I +P P+ GR +I++ H+ KV K ++D
Sbjct: 270 GQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEA 329
Query: 388 IARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKI 431
+ + T G +GADL N+V V +DL A K+
Sbjct: 330 LVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKV 373
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 377 (137.8 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/252 (35%), Positives = 132/252 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G E ++L E+V L P+RF T+ ARAIA
Sbjct: 161 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRT 220
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQ 308
F GSE + +VG GAR VR+LF AK + CI+FIDE+DAIGGSR +
Sbjct: 221 DACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDH 280
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +++ +LDGF I V+ ATN P++LD ALVRPGR DR I PD+EGR
Sbjct: 281 EVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTH 340
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H + + + DV ++AR P +G+D+ ++ +T DL A
Sbjct: 341 IFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAI 400
Query: 429 DKIMMGSERKSA 440
+K++ G ++ SA
Sbjct: 401 NKVIHGCKQFSA 412
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 377 (137.8 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/252 (35%), Positives = 132/252 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G E ++L E+V L P+RF T+ ARAIA
Sbjct: 161 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRT 220
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQ 308
F GSE + +VG GAR VR+LF AK + CI+FIDE+DAIGGSR +
Sbjct: 221 DACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDH 280
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +++ +LDGF I V+ ATN P++LD ALVRPGR DR I PD+EGR
Sbjct: 281 EVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTH 340
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H + + + DV ++AR P +G+D+ ++ +T DL A
Sbjct: 341 IFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAI 400
Query: 429 DKIMMGSERKSA 440
+K++ G ++ SA
Sbjct: 401 NKVIHGCKQFSA 412
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 397 (144.8 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 93/234 (39%), Positives = 125/234 (53%)
Query: 172 GISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRD-PKRFTRXXXXXXXXX 230
G+S L E + N ++ D+ G+DE KQ+L E V Y D P++F +
Sbjct: 475 GVSNPSALREVAVVEVP-NVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGV 533
Query: 231 XXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCII 290
TMLA+A+A E F S G E M+ G +RD+F A+ +PCI+
Sbjct: 534 LFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIV 593
Query: 291 FIDEIDAI----GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKAL 346
F+DE+D+I GGS ++ +NQLL E+DG + + VI ATN PE LD AL
Sbjct: 594 FLDELDSIAKARGGSVGDAGGASDRV-VNQLLTEMDGMTSKKNVFVIGATNRPEQLDPAL 652
Query: 347 VRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
RPGR D I VP PD GR I+++ + K +DDVDL IA T GFSGADL
Sbjct: 653 CRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADL 706
Score = 336 (123.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 81/241 (33%), Positives = 122/241 (50%)
Query: 165 GALIEDRGIS-KGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRX 222
G + +D I +G + + + + + + D+ G + ++ E+V LR P+ F
Sbjct: 192 GIVAQDTVIHCEGEPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSI 251
Query: 223 XXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAA 282
T++ARA+A E G FF +G E G +R F A
Sbjct: 252 GIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA 311
Query: 283 KKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESL 342
+K SP IIFIDEID+I R + + + ++QLL +DG K ++V+AATN P S+
Sbjct: 312 EKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSI 371
Query: 343 DKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLAN 402
D AL R GRFDR + + PD GR +I++ H + DDVDL IA T G+ G+D+A
Sbjct: 372 DPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAA 431
Query: 403 L 403
L
Sbjct: 432 L 432
Score = 43 (20.2 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 496 ISRKQMLARLDVCMGGRVAEELIFGENEVTSGASSDLQQATKLARAMVTKYGMSKEVGVV 555
+S L + V V E I G +EV +Q + K+G+S GV+
Sbjct: 476 VSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFL-KFGLSPSRGVL 534
Query: 556 THNYDDNGKSM 566
+ GK+M
Sbjct: 535 FYGPPGTGKTM 545
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 373 (136.4 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 108/353 (30%), Positives = 179/353 (50%)
Query: 60 ESQPSLHSNQSALSEY--VKALVKVDRLDDSELLKTLQKGIANSARDEESIGGI--SAFK 115
E +L+S + L+E ++ +K R +SE+ K K N + +S+G I K
Sbjct: 21 ERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKS-ENDIKSLQSVGQIVGEVLK 79
Query: 116 NVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISK 175
+ + + ++ + P ++V KE+L + R ++L ++ + L +
Sbjct: 80 QLSE--EKFIVKATNGPRYVVGCRRSINKEELKQGTR-VSLDMTTLTIMRQLPREVDPLV 136
Query: 176 GLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXX 234
HE+ P N +SDV G+ E +EL E+V L +P+ F R
Sbjct: 137 YKMSHED--PG---NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFG 191
Query: 235 XXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDE 294
T+LARA+A + F S + ++G AR +R++F+ A+ PCI+F+DE
Sbjct: 192 PPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDE 251
Query: 295 IDAIGGSR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPG 350
IDAIGG R D++ + TL +LL +LDGF + VI ATN P++LD AL+RPG
Sbjct: 252 IDAIGGRRFSEGTSADREIQR-TLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPG 310
Query: 351 RFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R DR I + P+ + R +I++ H +K+ K ++D + + + GFS ADL N+
Sbjct: 311 RLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNV 363
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 373 (136.4 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 108/353 (30%), Positives = 179/353 (50%)
Query: 60 ESQPSLHSNQSALSEY--VKALVKVDRLDDSELLKTLQKGIANSARDEESIGGI--SAFK 115
E +L+S + L+E ++ +K R +SE+ K K N + +S+G I K
Sbjct: 21 ERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKS-ENDIKSLQSVGQIVGEVLK 79
Query: 116 NVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISK 175
+ + + ++ + P ++V KE+L + R ++L ++ + L +
Sbjct: 80 QLSE--EKFIVKATNGPRYVVGCRRSINKEELKQGTR-VSLDMTTLTIMRQLPREVDPLV 136
Query: 176 GLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXX 234
HE+ P N +SDV G+ E +EL E+V L +P+ F R
Sbjct: 137 YKMSHED--PG---NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFG 191
Query: 235 XXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDE 294
T+LARA+A + F S + ++G AR +R++F+ A+ PCI+F+DE
Sbjct: 192 PPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDE 251
Query: 295 IDAIGGSR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPG 350
IDAIGG R D++ + TL +LL +LDGF + VI ATN P++LD AL+RPG
Sbjct: 252 IDAIGGRRFSEGTSADREIQR-TLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPG 310
Query: 351 RFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R DR I + P+ + R +I++ H +K+ K ++D + + + GFS ADL N+
Sbjct: 311 RLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNV 363
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 371 (135.7 bits), Expect = 7.3e-34, P = 7.3e-34
Identities = 120/408 (29%), Positives = 199/408 (48%)
Query: 44 RELYRRNDPEAVIRLFESQPSLHSNQSALS-EYVK--ALVKVDRLDDSELLKTLQ-KGIA 99
R+ ++ PEA RL PS L E +K L++ + + + E LK + K
Sbjct: 38 RKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEE 97
Query: 100 NSARDEESIGGISAFKNVGKPTKDG--VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALG 157
+ ++ ++ G + N+ + + ++ ++ P + V K+QL +I +
Sbjct: 98 DRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGC-SILMH 156
Query: 158 FLLISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDP 216
++S VG +++D + + + + + LES ++D+ G++ QE++E V L P
Sbjct: 157 NKVLSVVG-ILQDE-VDPMVSVMKVEKAPLES---YADIGGLEAQIQEIKEAVELPLTHP 211
Query: 217 KRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVR 276
+ + T+LA+A+A F GSE + ++G G + VR
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 271
Query: 277 DLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVI 333
+LF A SP I+FIDEIDA+G R N ++ ++ T+ +LL +LDGF + VI
Sbjct: 272 ELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVI 331
Query: 334 AATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTP 393
ATN ESLD AL+RPGR DR I P PD++ RR+I + H SK+ A+DV+L
Sbjct: 332 LATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKD 391
Query: 394 GFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAV 441
FSGAD+ + VT D + AK+K+M ++K V
Sbjct: 392 EFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMF--KKKEGV 437
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 369 (135.0 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 114/371 (30%), Positives = 181/371 (48%)
Query: 79 LVKVDRLDDSELLK----TLQKGIANSARDEESIGGISAFKNVGKPTKDGVLGTASAPIH 134
L+K++R+ D LL+ T Q+ I +S D+++ + G P G L H
Sbjct: 71 LLKLERIKDYLLLEEEYITNQEQIKSS--DDKNYVKLKIDDLRGSPVSVGTLEELIDENH 128
Query: 135 -MVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISK-GLGLHEEVQP--SLESN 190
++A G + + I + LL G L+ ++ S G+ L +EV P S+
Sbjct: 129 GIIATSVG---PEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGI-LLDEVDPLVSVMKV 184
Query: 191 TK-----FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLA 244
K ++D+ G++ QE++E V L P+ + T+LA
Sbjct: 185 EKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLA 244
Query: 245 RAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR-- 302
+A+A E F GSE + ++G G + VR++F A++ +P I+FIDEIDA+G R
Sbjct: 245 KAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYE 304
Query: 303 -NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNP 361
++ ++ T+ +LL +LDGF + VI ATN +SLD AL+RPGR DR I +PNP
Sbjct: 305 ATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNP 364
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTM 421
D + +R+I + H SK+ + DVDL SGAD+ + +T
Sbjct: 365 DTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQ 424
Query: 422 ADLEYAKDKIM 432
ADL A+DK +
Sbjct: 425 ADLRKARDKAL 435
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 369 (135.0 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 114/371 (30%), Positives = 181/371 (48%)
Query: 79 LVKVDRLDDSELLK----TLQKGIANSARDEESIGGISAFKNVGKPTKDGVLGTASAPIH 134
L+K++R+ D LL+ T Q+ I +S D+++ + G P G L H
Sbjct: 71 LLKLERIKDYLLLEEEYITNQEQIKSS--DDKNYVKLKIDDLRGSPVSVGTLEELIDENH 128
Query: 135 -MVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISK-GLGLHEEVQP--SLESN 190
++A G + + I + LL G L+ ++ S G+ L +EV P S+
Sbjct: 129 GIIATSVG---PEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGI-LLDEVDPLVSVMKV 184
Query: 191 TK-----FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLA 244
K ++D+ G++ QE++E V L P+ + T+LA
Sbjct: 185 EKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLA 244
Query: 245 RAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR-- 302
+A+A E F GSE + ++G G + VR++F A++ +P I+FIDEIDA+G R
Sbjct: 245 KAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYE 304
Query: 303 -NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNP 361
++ ++ T+ +LL +LDGF + VI ATN +SLD AL+RPGR DR I +PNP
Sbjct: 305 ATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNP 364
Query: 362 DVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTM 421
D + +R+I + H SK+ + DVDL SGAD+ + +T
Sbjct: 365 DTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQ 424
Query: 422 ADLEYAKDKIM 432
ADL A+DK +
Sbjct: 425 ADLRKARDKAL 435
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 366 (133.9 bits), Expect = 2.7e-33, P = 2.7e-33
Identities = 113/386 (29%), Positives = 186/386 (48%)
Query: 61 SQPSLHSNQSALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVG- 118
++P + ALS++ L++ + D LK L+ I + +D E++ I A ++VG
Sbjct: 37 AEPIDPERERALSKFKDKLLEHRKWDAR--LKDLRLSIRDLDKDYEKTENDIKALQSVGQ 94
Query: 119 ------KPTKDG--VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIED 170
K D ++ T+S P ++V KE L +R ++L ++ + L
Sbjct: 95 IIGEVLKQLDDERYIVKTSSGPRYIVGCRNTIKKENLKNGVR-VSLDMTTLTIMRIL--P 151
Query: 171 RGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXX 229
R + + +P F+ + G+ E +EL E++ L++P+ FTR
Sbjct: 152 REVDPLVYNMTTFEPG---EISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKG 208
Query: 230 XXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCI 289
T+LA+A+A G F S + ++G AR +R++F+ AK+ PCI
Sbjct: 209 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCI 268
Query: 290 IFIDEIDAIGGSR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKA 345
IF+DE+DAIGG R D++ + TL +LL ++DGF +I ATN P++LD A
Sbjct: 269 IFMDEVDAIGGRRFSEGTSADREIQR-TLMELLNQMDGFDTLGQTKIIMATNRPDTLDPA 327
Query: 346 LVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVN 405
L+R GR DR I + P+ GR +I + H SKV K + D + + GF+GAD+ N+V
Sbjct: 328 LLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVT 387
Query: 406 IXXXXXXXXXXXXVTMADLEYAKDKI 431
+ DL A K+
Sbjct: 388 EAGFFAIRDDRDYILQNDLMKAVRKV 413
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 364 (133.2 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 110/375 (29%), Positives = 182/375 (48%)
Query: 76 VKALVKVDRLDDSELLKTLQKGIANSARDEESIGGISAFKNVGKPTKDG--VLGTASAPI 133
+++ VK RLD EL K +K ++ + +S+G I V K +D ++ +S P
Sbjct: 20 IESKVKKLRLDIKELNKKYEK-TEDNLKALQSVGQIIG--QVLKQLEDEKFIVKASSGPR 76
Query: 134 HMVAAEGGHFKEQLWRTIRTIALGFLLISGVGAL-IEDRGISKGLGLHEEVQPSLESNTK 192
++V + K +L R ++L ++ + L E + + ++ S S K
Sbjct: 77 YVVGCKSKINKSKLVIGTR-VSLDMTTLTVMKRLPCEVDPLV--FNMISDIDKSENSTNK 133
Query: 193 --FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAG 249
++ + G+ E +++ E+V + +P + R T+LARA+A
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 250 EAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGG---SRNPKD 306
F S + ++G AR +R++F+ AK+ PCIIF+DEIDAIGG S+
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253
Query: 307 QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGR 366
+ ++ TL +LL LDGF++ + +I ATN P+ LD ALVRPGR DR I +P P+ R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 367 RQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
+I++ H +K+ K D+D + R GF+GADL N+ V D
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 427 AKDKIMMGSERKSAV 441
A KI G + + +
Sbjct: 374 AARKISEGKKLEGKI 388
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 364 (133.2 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 110/375 (29%), Positives = 182/375 (48%)
Query: 76 VKALVKVDRLDDSELLKTLQKGIANSARDEESIGGISAFKNVGKPTKDG--VLGTASAPI 133
+++ VK RLD EL K +K ++ + +S+G I V K +D ++ +S P
Sbjct: 20 IESKVKKLRLDIKELNKKYEK-TEDNLKALQSVGQIIG--QVLKQLEDEKFIVKASSGPR 76
Query: 134 HMVAAEGGHFKEQLWRTIRTIALGFLLISGVGAL-IEDRGISKGLGLHEEVQPSLESNTK 192
++V + K +L R ++L ++ + L E + + ++ S S K
Sbjct: 77 YVVGCKSKINKSKLVIGTR-VSLDMTTLTVMKRLPCEVDPLV--FNMISDIDKSENSTNK 133
Query: 193 --FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAG 249
++ + G+ E +++ E+V + +P + R T+LARA+A
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 250 EAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGG---SRNPKD 306
F S + ++G AR +R++F+ AK+ PCIIF+DEIDAIGG S+
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253
Query: 307 QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGR 366
+ ++ TL +LL LDGF++ + +I ATN P+ LD ALVRPGR DR I +P P+ R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 367 RQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
+I++ H +K+ K D+D + R GF+GADL N+ V D
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 427 AKDKIMMGSERKSAV 441
A KI G + + +
Sbjct: 374 AARKISEGKKLEGKI 388
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 364 (133.2 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 103/353 (29%), Positives = 176/353 (49%)
Query: 63 PSLHSNQSALSEYVKALVKVDRLDDSELLKTLQKGIANSAR-DEESIGGISAFKNVGKPT 121
P ++ AL+++ + L++ R DD LK ++ I + + +++ I A +++G+
Sbjct: 48 PEQEAHNKALNQFKRKLLEHRRYDDQ--LKQRRQNIRDLEKLYDKTENDIKALQSIGQLI 105
Query: 122 KDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHE 181
+ V+ S ++V A G + +R L GV ++ ++ L
Sbjct: 106 GE-VMKELSEEKYIVKASSG---PRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPR 161
Query: 182 EVQPSLESNTKFSD-------VKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXX 233
E P + + T F + G+ E +EL E++ L++P+ F R
Sbjct: 162 ETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLY 221
Query: 234 XXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFID 293
T+LA+A+A G F S + ++G AR +R++F+ AK+ PCIIF+D
Sbjct: 222 GPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMD 281
Query: 294 EIDAIGGSR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRP 349
E+DAIGG R D++ + TL +LL ++DGF +I ATN P++LD AL+RP
Sbjct: 282 EVDAIGGRRFSEGTSADREIQR-TLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRP 340
Query: 350 GRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLAN 402
GR DR + +P P+ GR +I + H +KV K + D + + GF+GAD+ N
Sbjct: 341 GRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRN 393
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 384 (140.2 bits), Expect = 6.8e-33, P = 6.8e-33
Identities = 89/233 (38%), Positives = 122/233 (52%)
Query: 172 GISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHYLRD-PKRFTRXXXXXXXXX 230
G+S L E + N ++ D+ G++E K+EL E V Y D P++F +
Sbjct: 478 GVSNPSALREVAVVEVP-NVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGV 536
Query: 231 XXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCII 290
TMLA+A+A E F S G E M+ G +RD+F A+ +PC++
Sbjct: 537 LFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVV 596
Query: 291 FIDEIDAIGGSRNPK--DQQYMK-MTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALV 347
F+DE+D+I SR D +NQLL E+DG + + VI ATN PE LD ALV
Sbjct: 597 FLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALV 656
Query: 348 RPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
RPGR D + VP PD R I+++ + K A DVD+ IA T GFSGADL
Sbjct: 657 RPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADL 709
Score = 342 (125.4 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 80/231 (34%), Positives = 118/231 (51%)
Query: 174 SKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXX 232
S+G + E + + + + D+ G + ++ E+V LR P+ F
Sbjct: 205 SEGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILM 264
Query: 233 XXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFI 292
T++ARA+A E G FF +G E G +R F A+K SP IIFI
Sbjct: 265 YGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFI 324
Query: 293 DEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRF 352
DEID+I R + + + ++QLL +DG K ++V+AATN P S+D AL R GRF
Sbjct: 325 DEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRF 384
Query: 353 DRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
DR + + PD GR +I+ H + +DVDL IA T G+ G+DLA+L
Sbjct: 385 DREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASL 435
Score = 39 (18.8 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 545 KYGMSKEVGVVTHNYDDNGKSM 566
K+G+S GV+ + GK+M
Sbjct: 527 KFGLSPSRGVLFYGPPGTGKTM 548
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 362 (132.5 bits), Expect = 7.7e-33, P = 7.7e-33
Identities = 114/401 (28%), Positives = 185/401 (46%)
Query: 48 RRNDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLDDSELLK----TLQKGIA-NSA 102
+R P+ ++L PS++ N + L+K++R+ D LL+ T Q+ A
Sbjct: 40 KRRGPDTAVKL----PSVYPNTRCKLK----LLKLERIKDHLLLEEEFVTNQEAFQPTEA 91
Query: 103 RDEESIGGISAFKNVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLIS 162
R E + + G P G L H + + + + +I + LL
Sbjct: 92 RQAEEREKVDELR--GYPMAIGTLEEIIDDDHAIVSSTA--SSEYYVSIMSFVDKGLLEP 147
Query: 163 GVGALIEDRGISKGLGLHEEVQPSL------ESNTK-FSDVKGVDEAKQELEEIVHY-LR 214
G L+ + ++ L ++ P + +S T+ ++D+ G++ QE++E V L
Sbjct: 148 GCSVLLHHKTVAVVGVLQDDADPMVSVMKLDKSPTESYADIGGLESQIQEIKESVELPLT 207
Query: 215 DPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARR 274
P+ + T+LA+A+A + F GSE + ++G G R
Sbjct: 208 HPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRL 267
Query: 275 VRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQYMKMTLNQLLVELDGFKQNEGII 331
R +F A +P I+FIDEIDAIG R ++ ++ T+ +LL +LDGF I
Sbjct: 268 CRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTMLELLNQLDGFDDRGDIK 327
Query: 332 VIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARG 391
VI ATN ESLD AL+RPGR DR I+ NPD +++I+ H SK+ ADDV+L I G
Sbjct: 328 VIMATNKIESLDPALIRPGRIDRKILFENPDANTKKKILTIHTSKMSLADDVNLDEIVTG 387
Query: 392 TPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIM 432
SGAD+ + V D + AK++++
Sbjct: 388 KDDLSGADIKAICTEAGLLALRERRMQVKAEDFKSAKERVL 428
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 362 (132.5 bits), Expect = 7.7e-33, P = 7.7e-33
Identities = 118/408 (28%), Positives = 199/408 (48%)
Query: 44 RELYRRNDPEAVIRLFESQPSLHSNQSALS-EYVK--ALVKVDRLDDSELLKTLQ-KGIA 99
R+ ++ PEA RL PS L E +K L++ + + + E LK + K
Sbjct: 38 RKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEE 97
Query: 100 NSARDEESIGGISAFKNVGKPTKDG--VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALG 157
+ ++ ++ G + N+ + + ++ ++ P + V K+QL +I +
Sbjct: 98 DRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGC-SILMH 156
Query: 158 FLLISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDP 216
++S VG +++D + + + + + LES ++D+ G++ QE++E V L P
Sbjct: 157 NKVLSVVG-ILQDE-VDPMVSVMKVEKAPLES---YADIGGLEAQIQEIKEAVELPLTHP 211
Query: 217 KRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVR 276
+ + T+LA+A+A F GSE + ++G G + VR
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 271
Query: 277 DLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVI 333
+LF A SP I+FIDEIDA+G R + ++ ++ T+ +LL +LDGF + VI
Sbjct: 272 ELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVI 331
Query: 334 AATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTP 393
ATN ESLD AL+RPGR DR I P PD++ RR+I + H SK+ ++DV+L
Sbjct: 332 LATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKD 391
Query: 394 GFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAV 441
FSGAD+ + VT D + AK+K+M ++K V
Sbjct: 392 EFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMF--KKKEGV 437
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 362 (132.5 bits), Expect = 7.7e-33, P = 7.7e-33
Identities = 109/353 (30%), Positives = 174/353 (49%)
Query: 64 SLHSNQSALSEYVKALVKVDRLDDS-----ELLKTLQKGIANSARDEESIGGISAF-KNV 117
S+ +A+SEY K L++ L+ E L+ +K + D +S+ + V
Sbjct: 7 SVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEV 66
Query: 118 GKPTKDG--VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISK 175
+P + ++ +S P ++V KE+L R + L ++ + AL +
Sbjct: 67 LRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVV-LDMTTLTIMRALPREVDPVV 125
Query: 176 GLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXX 234
LHE+ P N +S V G+ + +EL E + L +P+ F R
Sbjct: 126 YNMLHED--PG---NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
Query: 235 XXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDE 294
T+LARAIA F S + ++G AR +R++F+ A++ PCIIF+DE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240
Query: 295 IDAIGGSR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPG 350
IDAIGG R D++ + TL +LL +LDGF + +I ATN P+ LD AL+RPG
Sbjct: 241 IDAIGGRRFSEGTSADREIQR-TLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPG 299
Query: 351 RFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R DR I +P P+ + R I++ H + + K ++D I + GF+GADL N+
Sbjct: 300 RLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNI 352
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 343 (125.8 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 82/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +R+
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ ++
Sbjct: 424 ENVL 427
Score = 40 (19.1 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 361 (132.1 bits), Expect = 1.0e-32, P = 1.0e-32
Identities = 108/347 (31%), Positives = 173/347 (49%)
Query: 70 SALSEYVKALVKVDRLDDS-----ELLKTLQKGIANSARDEESIGGISAF-KNVGKPTKD 123
+A+++Y K L+ L+ E L+ +K + D +S+ + V +P +
Sbjct: 13 AAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDN 72
Query: 124 G--VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHE 181
++ +S P ++V KE+L R + L ++ + AL + LHE
Sbjct: 73 ERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVV-LDMTTLTIMRALPREVDPVVYNMLHE 131
Query: 182 EVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXX 240
+ P N +S V G+ + +EL E + L +P+ F R
Sbjct: 132 D--PG---NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGK 186
Query: 241 TMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGG 300
T+LARAIA F S + ++G AR +R++F+ A++ PCIIF+DEIDAIGG
Sbjct: 187 TLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGG 246
Query: 301 SR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHI 356
R D++ + TL +LL +LDGF Q + +I ATN P+ LD AL+RPGR DR I
Sbjct: 247 RRFSEGTSADREIQR-TLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKI 305
Query: 357 VVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+P P+ + R +I++ H S + K ++D I + GF+GADL N+
Sbjct: 306 EIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNI 352
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 360 (131.8 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 114/376 (30%), Positives = 177/376 (47%)
Query: 69 QSALSEYVKALVKVDRLDDSELLKTLQKGIANSARDEE-SIGGISAFKNVGKPTKDGVLG 127
+ AL EY ++L+ D + LK L+ GI + R+ + S I A ++VG+ + VL
Sbjct: 10 EQALEEYKRSLL--DLREWEAKLKALRMGIKDLQREFDISEENIKALQSVGQIIGE-VLK 66
Query: 128 TASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP-- 185
+V A G + R+ L G ++ ++ L EV P
Sbjct: 67 QLDEERFIVKASSG---PRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVDPLV 123
Query: 186 ---SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
SLE F+ + G+++ +EL E++ L++P+ F R
Sbjct: 124 YNMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTG 183
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T+LARA+A F S + ++G AR +R++F AK+ PCIIF+DEIDAIG
Sbjct: 184 KTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIG 243
Query: 300 GSR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRH 355
G R D++ + TL +LL +LDGF +I ATN P++LD AL+R GR DR
Sbjct: 244 GRRFSEGTSADREIQR-TLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRK 302
Query: 356 IVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXX 415
I +P P+ GR +I++ H S V D+D + + + G +GADL N+V
Sbjct: 303 IEIPLPNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDY 362
Query: 416 XXXVTMADLEYAKDKI 431
+ D A K+
Sbjct: 363 RDAINQDDFNRAVRKV 378
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 360 (131.8 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 89/257 (34%), Positives = 134/257 (52%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+D+ QE++E++ ++ P+ F T+LARA+A
Sbjct: 139 DSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVA 198
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPK 305
F SGSE + F+G G+R VR+LF A++ +P IIF+DEID+IG +R
Sbjct: 199 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG 258
Query: 306 DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
D + + T+ +LL +LDGF+ + I VI ATN + LD+AL+RPGR DR I P P+ E
Sbjct: 259 DSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEA 317
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLE 425
R I++ H K+ ++L IA PG SGA++ + VT D E
Sbjct: 318 RLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 377
Query: 426 YAKDKIMMGSERKSAVI 442
A K+MM K+ I
Sbjct: 378 MAVSKVMMKDSEKNMSI 394
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 340 (124.7 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 80/244 (32%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++DV G+D+ QE++E V L P+ + T+LA+A+A +
Sbjct: 187 YADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQT 246
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDA+G R N ++
Sbjct: 247 SATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGER 306
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + V+ ATN ESLD AL+RPGR DR I P PD + +R+
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRR 366
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ +V+L SGAD+ + VTM D + +K
Sbjct: 367 IFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSK 426
Query: 429 DKIM 432
+ ++
Sbjct: 427 ENVL 430
Score = 41 (19.5 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 167 LIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
L+E I L + + E K +++G A LEEI+
Sbjct: 76 LMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEII 119
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 340 (124.7 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +R+
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ A+DV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ ++
Sbjct: 424 ENVL 427
Score = 40 (19.1 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 358 (131.1 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 104/348 (29%), Positives = 171/348 (49%)
Query: 69 QSALSEYVKALVKVDRLDDS-----ELLKTLQKGIANSARDEESIGGISAF-KNVGKPTK 122
+++++EY K L+ L+ E LK +K + D +S+ + V +P
Sbjct: 13 RASVTEYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLD 72
Query: 123 DG--VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLH 180
+ ++ +S P ++V KE+L R + L ++ + L + LH
Sbjct: 73 NERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVV-LDMTTLTIMRTLPREVDPVVYNMLH 131
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ P N +S V G+ + +EL E + L +P+ F R
Sbjct: 132 ED--PG---NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTG 186
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T+LARAIA F S + ++G AR +R++F A+ PCIIF+DEIDAIG
Sbjct: 187 KTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIG 246
Query: 300 GSR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRH 355
G R D++ + TL +LL +LDGF + + +I ATN P+ LD AL+RPGR DR
Sbjct: 247 GRRFSEGTSADREIQR-TLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRK 305
Query: 356 IVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I +P P+ + R ++++ H + + K ++D + + GF+GADL N+
Sbjct: 306 IEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 353
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 183 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 302
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 303 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 362
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 363 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 422
Query: 429 DKIM 432
+ ++
Sbjct: 423 ENVL 426
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 88 EEKQE--EERSKVDDLRGTPMSVGTLEEII 115
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 182 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 241
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 242 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 301
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 302 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 361
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 362 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 421
Query: 429 DKIM 432
+ ++
Sbjct: 422 ENVL 425
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 87 EEKQE--EERSKVDDLRGTPMSVGTLEEII 114
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ ++
Sbjct: 424 ENVL 427
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ ++
Sbjct: 424 ENVL 427
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 111 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 170
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 171 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 230
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 231 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 290
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 291 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 350
Query: 429 DKIM 432
+ ++
Sbjct: 351 ENVL 354
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 16 EEKQE--EERSKVDDLRGTPMSVGTLEEII 43
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ ++
Sbjct: 424 ENVL 427
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ ++
Sbjct: 424 ENVL 427
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ ++
Sbjct: 424 ENVL 427
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 339 (124.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ +P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ ++
Sbjct: 424 ENVL 427
Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 357 (130.7 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 113/396 (28%), Positives = 186/396 (46%)
Query: 48 RRNDPEAVIRLFESQPSLHSNQSALS-EYVK--ALVKVDRLDDSELLKTLQKGIANSARD 104
R+ P +L PS L E +K L++ + + +SE+LK +K +
Sbjct: 36 RKGGPATAEKLPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQ 95
Query: 105 EESIGG----ISAFKNVGKPTKDGVLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLL 160
E I G I + + ++ + + P + V+ KE L ++ L
Sbjct: 96 LEEIRGNPLSIGTLEEI-IDDDHAIVTSPTMPDYYVSILSFVDKELLEPGC-SVLLHHKT 153
Query: 161 ISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRF 219
+S VG L +D + + + P+ ES +SD+ G++ QE++E V L P+ +
Sbjct: 154 MSIVGVLQDDADPMVSV-MKMDKSPT-ES---YSDIGGLESQIQEIKESVELPLTHPELY 208
Query: 220 TRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLF 279
T+LA+A+A + F GSE + ++G G R R +F
Sbjct: 209 EEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIF 268
Query: 280 SAAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAAT 336
A + +P I+FIDEIDAIG R N ++ ++ T+ +LL +LDGF + VI AT
Sbjct: 269 KVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMAT 328
Query: 337 NFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFS 396
N E+LD AL+RPGR DR I+ NPD+ +++I+ H SK+ ++DV+L + S
Sbjct: 329 NKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLS 388
Query: 397 GADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIM 432
GAD+ + VT D + AK+++M
Sbjct: 389 GADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVM 424
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 377 (137.8 bits), Expect = 4.4e-32, P = 4.4e-32
Identities = 82/218 (37%), Positives = 119/218 (54%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N ++ D+ G++E K+EL E V + ++F R T+LA+AIA
Sbjct: 493 NVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIA 552
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK--D 306
E F S G E M+ G VRD+F A+ +PC++F+DE+D+I +R D
Sbjct: 553 NECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGD 612
Query: 307 QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGR 366
+NQLL E+DG + + VI ATN P+ +D AL+RPGR D+ I VP PD E R
Sbjct: 613 SGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEAR 672
Query: 367 RQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLV 404
I+++ + A+DVDL +A+ T GFSGADL +V
Sbjct: 673 FSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVV 710
Score = 350 (128.3 bits), Expect = 5.9e-29, P = 5.9e-29
Identities = 86/241 (35%), Positives = 123/241 (51%)
Query: 165 GALIEDRGIS-KGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRX 222
G + +D I +G ++ E + S + + D+ G ++ E+V LR P+ F
Sbjct: 194 GIVSQDTIIHWEGEPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSI 253
Query: 223 XXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAA 282
T++ARA+A E G FF +G E G +R F A
Sbjct: 254 GIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA 313
Query: 283 KKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESL 342
+K SP IIFIDEID+I R + + + ++QLL +DG K ++V+AATN P S+
Sbjct: 314 EKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSI 373
Query: 343 DKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLAN 402
D AL R GRFDR + V PD GR +I+ H + ADDVDL IA T G+ G+DLA+
Sbjct: 374 DPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLAS 433
Query: 403 L 403
L
Sbjct: 434 L 434
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 355 (130.0 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 86/247 (34%), Positives = 121/247 (48%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ DV G E ++L E+V L P+RF T+ ARA+A
Sbjct: 184 YGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + +VG GAR VR+LF A+ + CIIF DEIDA+GG+R
Sbjct: 244 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDN 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +L+ +LDGF I V+ ATN P +LD AL+RPGR DR I PDVEGR
Sbjct: 304 EVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRAN 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I+ H + D+ +I+R P +GA+L ++ T D A
Sbjct: 364 ILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRARRKVATEKDFLAAV 423
Query: 429 DKIMMGS 435
DK++ G+
Sbjct: 424 DKVIKGN 430
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 355 (130.0 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 87/262 (33%), Positives = 129/262 (49%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + + DV G E + L E+V L P+RF + T
Sbjct: 168 MQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKT 227
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + CIIF DEIDAIGG+
Sbjct: 228 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGA 287
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P +LD+AL+RPGR DR +
Sbjct: 288 RFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEF 347
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I+ H + D+ +IAR P +GA+L ++
Sbjct: 348 GLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRV 407
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A K++ G+++ S+
Sbjct: 408 ATEKDFLDAVQKVVKGNQKFSS 429
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 338 (124.0 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 83/262 (31%), Positives = 131/262 (50%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G + ++L E+V L P+R+ T
Sbjct: 166 MQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDA+GG+
Sbjct: 226 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGA 285
Query: 302 RNPKDQ---QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R Q ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR +
Sbjct: 286 RFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 345
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+ GR I++ H ++ D+ ++AR P +GA++ ++
Sbjct: 346 ALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ G + SA
Sbjct: 406 ATEKDFLEAINKVVKGYAKFSA 427
Score = 38 (18.4 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 68 NQSALSEY-VKALVKVDRLDDSELLKTLQKGIANSARDEESIGGI 111
N AL E + L + + +E LKTL I N + + G+
Sbjct: 23 NFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGV 67
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 338 (124.0 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 83/262 (31%), Positives = 131/262 (50%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G + ++L E+V L P+R+ T
Sbjct: 166 MQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDA+GG+
Sbjct: 226 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGA 285
Query: 302 RNPKDQ---QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R Q ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR +
Sbjct: 286 RFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 345
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+ GR I++ H ++ D+ ++AR P +GA++ ++
Sbjct: 346 ALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ G + SA
Sbjct: 406 ATEKDFLEAINKVVKGYAKFSA 427
Score = 38 (18.4 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 68 NQSALSEY-VKALVKVDRLDDSELLKTLQKGIANSARDEESIGGI 111
N AL E + L + + +E LKTL I N + + G+
Sbjct: 23 NFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGV 67
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 335 (123.0 bits), Expect = 7.3e-32, Sum P(2) = 7.3e-32
Identities = 81/244 (33%), Positives = 125/244 (51%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+D QE++E V L P+ + T+LA+A+A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + ++G G + VR+LF A++ P I+FIDEIDAIG R N ++
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P PD + +++
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H S++ ADDV L + SGAD+ + VT D + +K
Sbjct: 364 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 429 DKIM 432
+ +
Sbjct: 424 ENFL 427
Score = 40 (19.1 bits), Expect = 7.3e-32, Sum P(2) = 7.3e-32
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIV 210
EE Q E +K D++G + LEEI+
Sbjct: 89 EEKQE--EERSKVDDLRGTPMSVGTLEEII 116
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 353 (129.3 bits), Expect = 8.0e-32, P = 8.0e-32
Identities = 80/212 (37%), Positives = 125/212 (58%)
Query: 193 FSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+SD+ G+D+ ++L E IV + ++F + T+LARA A +
Sbjct: 185 YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQT 244
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQ 308
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R + +
Sbjct: 245 NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDR 304
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF ++ + VIAATN P++LD AL+R GR DR I +P+P+ E R +
Sbjct: 305 EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRAR 364
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
I++ H K+ DV+ +AR T F+GA L
Sbjct: 365 ILQIHSRKMNVHKDVNFEELARSTDDFNGAQL 396
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 353 (129.3 bits), Expect = 8.0e-32, P = 8.0e-32
Identities = 80/212 (37%), Positives = 125/212 (58%)
Query: 193 FSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+SD+ G+D+ ++L E IV + ++F + T+LARA A +
Sbjct: 185 YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQT 244
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQ 308
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R + +
Sbjct: 245 NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDR 304
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF ++ + VIAATN P++LD AL+R GR DR I +P+P+ E R +
Sbjct: 305 EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRAR 364
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
I++ H K+ DV+ +AR T F+GA L
Sbjct: 365 ILQIHSRKMNVHKDVNFEELARSTDDFNGAQL 396
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 353 (129.3 bits), Expect = 8.0e-32, P = 8.0e-32
Identities = 83/212 (39%), Positives = 121/212 (57%)
Query: 193 FSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+++ QEL E IV + +RF + T++ARA A +
Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQ 308
F +G + +MF+G GA+ VRD F AK+++PCIIFIDEIDAIG R + +
Sbjct: 230 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 289
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF +E I VIAATN + LD AL+R GR DR I P+P E R +
Sbjct: 290 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 349
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
I++ H K+ DV+ +AR T F+GA L
Sbjct: 350 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQL 381
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 353 (129.3 bits), Expect = 8.0e-32, P = 8.0e-32
Identities = 87/257 (33%), Positives = 133/257 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 155 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVA 214
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPK 305
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 215 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG 274
Query: 306 DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
++ T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P PD +
Sbjct: 275 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKA 334
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLE 425
R I++ H K+ +++ IA PG SGA++ ++ VT D E
Sbjct: 335 RADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 394
Query: 426 YAKDKIMMGSERKSAVI 442
A K+M K+ I
Sbjct: 395 MAVGKVMQKDSEKNMSI 411
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 352 (129.0 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 80/213 (37%), Positives = 123/213 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
K++D+ G+D+ +E+ E IV +++ +RF + T+LARA A E
Sbjct: 209 KYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAE 268
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DA+G R ++
Sbjct: 269 TNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGD 328
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF ++ I V+AATN + LD AL+R GR DR I P P+ E R
Sbjct: 329 REVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARA 388
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
I++ H K+ D V+ +AR T F GA L
Sbjct: 389 NILQIHSRKMTVEDSVNWAELARSTDEFGGAQL 421
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 352 (129.0 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 106/378 (28%), Positives = 175/378 (46%)
Query: 67 SNQSALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGV 125
+ + L +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 4 NREKGLQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVL 61
Query: 126 LGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 62 KQLTEEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDP 117
Query: 186 -----SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXX 237
S E + +S++ G+ E +EL E++ L +P+ F R
Sbjct: 118 LVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 238 XXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDA 297
T+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDA
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA 237
Query: 298 IGGSR----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFD 353
IGG R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR D
Sbjct: 238 IGGRRFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 296
Query: 354 RHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXX 413
R I + P+ + R I++ H + K D+D I + + GF+GADL N+
Sbjct: 297 RKIHIELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
Query: 414 XXXXXVTMADLEYAKDKI 431
VT D A K+
Sbjct: 357 ADHEYVTQEDFMKAVRKV 374
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 351 (128.6 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 87/253 (34%), Positives = 127/253 (50%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+SDV G E ++L E+V L P+RF + T+ ARA+A
Sbjct: 185 YSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRT 244
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + +VG GAR VR+LF A+ + CIIF DE+DAIGG+R
Sbjct: 245 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDN 304
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +L+ +LDGF I V+ ATN P +LD AL+RPGR DR + PD+EGR
Sbjct: 305 EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRAN 364
Query: 369 IMESHMSKVLKAD-DVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYA 427
I H SK + + D+ +I+R P +GA+L ++ D A
Sbjct: 365 IFRIH-SKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKDFLKA 423
Query: 428 KDKIMMGSERKSA 440
DK++ G+ + S+
Sbjct: 424 VDKVIKGNLKFSS 436
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 351 (128.6 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 88/257 (34%), Positives = 132/257 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+D +E++E++ ++ P+ F T+LARA+A
Sbjct: 171 DSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 230
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPK 305
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 231 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRG 290
Query: 306 DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
++ T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P PD +
Sbjct: 291 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKA 350
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLE 425
R QI++ H K+ + + IA PG SGA++ ++ VT D E
Sbjct: 351 RAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 410
Query: 426 YAKDKIMMGSERKSAVI 442
A K+M K+ I
Sbjct: 411 MAVGKVMQKDSEKNMSI 427
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 86/252 (34%), Positives = 124/252 (49%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ DV G E ++L E+V L P++F T+ ARA+A
Sbjct: 169 YKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRT 228
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + +VG GAR VRDLF A+ + CIIF DE+DAIGG+R
Sbjct: 229 DAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDN 288
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR + PD+EGR
Sbjct: 289 EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAH 348
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I H + A D+ ++AR P +GAD+ ++ V+ D A
Sbjct: 349 IFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAI 408
Query: 429 DKIMMGSERKSA 440
DK++ + SA
Sbjct: 409 DKVIKSYAKFSA 420
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 151 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 210
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 211 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 270
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 271 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 329
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 330 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 389
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 390 EMAVAKVMQKDSEKNMSI 407
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 265 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 384 EMAVAKVMQKDSEKNMSI 401
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 102/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 8 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 65
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 121
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E N +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 242 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 300
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 301 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNV 346
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 265 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 384 EMAVAKVMQKDSEKNMSI 401
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 265 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 384 EMAVAKVMQKDSEKNMSI 401
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 265 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 384 EMAVAKVMQKDSEKNMSI 401
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 153 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 272
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 273 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 331
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 332 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 391
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 392 EMAVAKVMQKDSEKNMSI 409
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 153 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 272
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 273 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 331
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 332 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 391
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 392 EMAVAKVMQKDSEKNMSI 409
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 265 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 384 EMAVAKVMQKDSEKNMSI 401
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 265 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 384 EMAVAKVMQKDSEKNMSI 401
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 265 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 384 EMAVAKVMQKDSEKNMSI 401
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 349 (127.9 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 102/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 8 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 65
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 121
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E N +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 242 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 300
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 301 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 346
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 349 (127.9 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 102/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 14 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 71
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 72 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 127
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E N +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 128 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 187
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 188 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 247
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 248 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 306
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 307 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 352
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 349 (127.9 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 102/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 8 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 65
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 121
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E N +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 242 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 300
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 301 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 346
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 349 (127.9 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 102/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 22 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 79
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 80 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 135
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E N +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 136 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 256 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 314
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 315 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 360
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 349 (127.9 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 102/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 8 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 65
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 121
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E N +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 242 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 300
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 301 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 346
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 349 (127.9 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 102/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 8 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 65
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 121
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E N +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 242 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 300
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 301 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 346
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 349 (127.9 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 102/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 22 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 79
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 80 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 135
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E N +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 136 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 256 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 314
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 315 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 360
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 370 (135.3 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 82/238 (34%), Positives = 126/238 (52%)
Query: 171 RGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXX 229
+G S L E V + NT +SD+ G+ K+EL+E+V Y + P+++ +
Sbjct: 462 QGKSSPSALREAVVET--PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRG 519
Query: 230 XXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCI 289
T+LA+AIA E F S G E M+ G VRD+F A+ +PC+
Sbjct: 520 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCV 579
Query: 290 IFIDEIDAI----GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKA 345
+F DE+D+I GG +NQ+L E+DG + + +I ATN P+ +D A
Sbjct: 580 LFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPA 639
Query: 346 LVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
++RPGR D+ I +P PD R QI+++ + K + D+DL +A+ T GFSGADL +
Sbjct: 640 VLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEI 697
Score = 339 (124.4 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 84/224 (37%), Positives = 117/224 (52%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
EE + S+ ++ + D+ GV + +++E+V LR P+ F
Sbjct: 198 EEEEESM-NDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTG 256
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F +K P I+FIDEIDAI
Sbjct: 257 KTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIA 316
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + + ++QLL +DG K ++VIAATN P S+D AL R GRFDR I +
Sbjct: 317 PKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIG 376
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I+ H + ADDVDL IA GF GADLA+L
Sbjct: 377 IPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASL 420
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 370 (135.3 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 82/238 (34%), Positives = 126/238 (52%)
Query: 171 RGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXX 229
+G S L E V + NT +SD+ G+ K+EL+E+V Y + P+++ +
Sbjct: 462 QGKSSPSALREAVVET--PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRG 519
Query: 230 XXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCI 289
T+LA+AIA E F S G E M+ G VRD+F A+ +PC+
Sbjct: 520 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCV 579
Query: 290 IFIDEIDAI----GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKA 345
+F DE+D+I GG +NQ+L E+DG + + +I ATN P+ +D A
Sbjct: 580 LFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPA 639
Query: 346 LVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
++RPGR D+ I +P PD R QI+++ + K + D+DL +A+ T GFSGADL +
Sbjct: 640 VLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEI 697
Score = 339 (124.4 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 84/224 (37%), Positives = 117/224 (52%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
EE + S+ ++ + D+ GV + +++E+V LR P+ F
Sbjct: 198 EEEEESM-NDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTG 256
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F +K P I+FIDEIDAI
Sbjct: 257 KTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIA 316
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + + ++QLL +DG K ++VIAATN P S+D AL R GRFDR I +
Sbjct: 317 PKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIG 376
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I+ H + ADDVDL IA GF GADLA+L
Sbjct: 377 IPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASL 420
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 348 (127.6 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 83/253 (32%), Positives = 131/253 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 175 DSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKD 306
F SGSE + ++G G+R VR+LF A++ +P IIF+DEID+IG R
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHG 294
Query: 307 QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGR 366
++ T+ +LL +LDGF+ + I VI TN + LD+AL+RPGR DR I PNP+VE R
Sbjct: 295 DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEAR 354
Query: 367 RQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
+I++ H K+ +D++ IA SGA++ + VT D E
Sbjct: 355 MEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEM 414
Query: 427 AKDKIMMGSERKS 439
A K+M K+
Sbjct: 415 AVAKVMKQDAEKN 427
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 348 (127.6 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 83/253 (32%), Positives = 131/253 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 175 DSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKD 306
F SGSE + ++G G+R VR+LF A++ +P IIF+DEID+IG R
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHG 294
Query: 307 QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGR 366
++ T+ +LL +LDGF+ + I VI TN + LD+AL+RPGR DR I PNP+VE R
Sbjct: 295 DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEAR 354
Query: 367 RQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEY 426
+I++ H K+ +D++ IA SGA++ + VT D E
Sbjct: 355 MEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEM 414
Query: 427 AKDKIMMGSERKS 439
A K+M K+
Sbjct: 415 AVAKVMKQDAEKN 427
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 347 (127.2 bits), Expect = 3.8e-31, P = 3.8e-31
Identities = 108/372 (29%), Positives = 181/372 (48%)
Query: 79 LVKVDRLDDSELLKTLQKGIANSAR----DEESIGGISAFKNV-GKPTKDGVLGTASAPI 133
L+K+ R+ D L++ ++ + N R DE + + + G P G L
Sbjct: 69 LLKMQRIHDHLLME--EEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDD 126
Query: 134 HMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGIS-KGLGLHEEVQPSL----- 187
H + + G + + +I + +L G L+ + +S GL L ++ P +
Sbjct: 127 HAIVSTAG---PEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGL-LLDDTDPMINVMKL 182
Query: 188 -ESNTK-FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLA 244
++ T+ ++D+ G++ QE++E V L P+ + T+LA
Sbjct: 183 DKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLA 242
Query: 245 RAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNP 304
+A+A + F GSE + ++G G R VR LF+AA++ SP I+FIDEIDAIG R
Sbjct: 243 KAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYD 302
Query: 305 KD---QQYMKMTLNQLLVELDGFKQNE-GIIVIAATNFPESLDKALVRPGRFDRHIVVPN 360
++ ++ T+ +LL +LDGF ++ I VI ATN LD AL+RPGR DR I+ N
Sbjct: 303 AQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFEN 362
Query: 361 PDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVT 420
PD +R+I H SK+ +DV+L + + SGA++ +V+ V
Sbjct: 363 PDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVV 422
Query: 421 MADLEYAKDKIM 432
M D A++K++
Sbjct: 423 MDDFRQAREKVL 434
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 347 (127.2 bits), Expect = 3.8e-31, P = 3.8e-31
Identities = 82/211 (38%), Positives = 123/211 (58%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G D+ QEL E +V + RF TM+ARA+A +
Sbjct: 175 QYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQ 234
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 235 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 294
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N+ I VIAATN + LD AL+R GR DR I +P+P+ + R
Sbjct: 295 REVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARA 354
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ DV+ +AR T F+GA
Sbjct: 355 RIMQIHSRKMNVNKDVNFEELARCTDDFNGA 385
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 347 (127.2 bits), Expect = 3.8e-31, P = 3.8e-31
Identities = 82/211 (38%), Positives = 123/211 (58%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G D+ QEL E +V + RF TM+ARA+A +
Sbjct: 175 QYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQ 234
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 235 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 294
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N+ I VIAATN + LD AL+R GR DR I +P+P+ + R
Sbjct: 295 REVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARA 354
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ DV+ +AR T F+GA
Sbjct: 355 RIMQIHSRKMNVNKDVNFEELARCTDDFNGA 385
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 346 (126.9 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 96/320 (30%), Positives = 157/320 (49%)
Query: 125 VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQ 184
++ + P H V K +L+ T+ L +S VG + D + + + + +
Sbjct: 121 IVSSTVGPEHYVRIMSFVDKSKLYLGA-TVLLNNKTLSVVGVI--DGEVDPMVNVMKVEK 177
Query: 185 PSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTML 243
ES +SD+ G++ QE++E + L P+ + T+L
Sbjct: 178 APTES---YSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLL 234
Query: 244 ARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN 303
A+A+A + F GSE + ++G G + VR+LF A + +P I+FIDEIDA+G R
Sbjct: 235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRY 294
Query: 304 PKD---QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPN 360
++ ++ T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I P
Sbjct: 295 DSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 354
Query: 361 PDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVT 420
PD++ +R+I E H +K+ ++DV+L SGAD+ + VT
Sbjct: 355 PDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVT 414
Query: 421 MADLEYAKDKIMMGSERKSA 440
D + AK+K++ RK+A
Sbjct: 415 HTDFKKAKEKVLY---RKTA 431
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 346 (126.9 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 105/346 (30%), Positives = 175/346 (50%)
Query: 71 ALSEYVKALVK---VD-RLDDS-ELLKTLQKGIANSARDEESIGGISAFKN--VGKPTKD 123
ALSEY K L++ ++ RL + E +K L K S D +++ + + + T+D
Sbjct: 16 ALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLTED 75
Query: 124 G-VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEE 182
++ + P ++V K +L R +AL ++ + L + HE+
Sbjct: 76 KFIVKATNGPRYVVGCRRQLDKAKLKSGTR-VALDMTTLTIMRYLPREVDPLVYNMSHED 134
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
P + +S + G+ + +EL E++ L +P+ F R T
Sbjct: 135 --PG---DVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKT 189
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 190 LLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 249
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P+SLD AL+RPGR DR I
Sbjct: 250 RFSEGTSADREIQR-TLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIE 308
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+P P+ + R +I++ H K+ K ++D I + + F+GADL N+
Sbjct: 309 IPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNV 354
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 346 (126.9 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 88/258 (34%), Positives = 133/258 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 144 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + F+G G+R VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 263
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 264 GDSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEE 322
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ ++L IA PG SGA++ + VT D
Sbjct: 323 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 382
Query: 425 EYAKDKIMMGSERKSAVI 442
E A K+M K+ I
Sbjct: 383 EMAVAKVMQKDSEKNMSI 400
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 346 (126.9 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 82/252 (32%), Positives = 129/252 (51%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++DV G E +++ E+V + P++F + T+LARA+A
Sbjct: 167 YNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRT 226
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + +VG GAR VR+LF A+ + CI+F DE+DAIGG+R
Sbjct: 227 DACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDN 286
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +++ +LDGF I V+ ATN P++LD AL+RPGR DR + PD+E R Q
Sbjct: 287 EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQ 346
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I + H + D+ ++AR P +GAD+ ++ VT D A
Sbjct: 347 IFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAV 406
Query: 429 DKIMMGSERKSA 440
+K++ G ++ SA
Sbjct: 407 NKVIKGYQKFSA 418
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 345 (126.5 bits), Expect = 6.3e-31, P = 6.3e-31
Identities = 77/219 (35%), Positives = 121/219 (55%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N +S++ G+ E +EL E++ L +P+ F R T+LARA+A
Sbjct: 121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
+ F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG R
Sbjct: 181 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 240
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I + P+ +
Sbjct: 241 ADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 299
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R I++ H + K ++D I + + GF+GADL N+
Sbjct: 300 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 338
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 345 (126.5 bits), Expect = 6.3e-31, P = 6.3e-31
Identities = 82/212 (38%), Positives = 121/212 (57%)
Query: 193 FSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G+++ QEL E IV + ++F + T++ARA A +
Sbjct: 169 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 228
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQ 308
F +G + +MF+G GA+ VRD F AK++SPCIIFIDEIDAIG R + +
Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF ++ I VIAATN + LD AL+R GR DR I P+P E R +
Sbjct: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGR 348
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
I++ H K+ DV+ +AR T F+GA L
Sbjct: 349 ILQIHSRKMNVNADVNFEELARSTDDFNGAQL 380
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 367 (134.2 bits), Expect = 6.3e-31, P = 6.3e-31
Identities = 79/218 (36%), Positives = 122/218 (55%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
NT ++D+ G++ K+EL+E+V Y + P +F + T+LA+AIA
Sbjct: 470 NTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 529
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKD 306
E F S G E M+ G VRD+F A+ +PC++F DE+D+I +R N D
Sbjct: 530 NECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGD 589
Query: 307 QQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD +
Sbjct: 590 AGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKS 649
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R I+++++ K A +VDL IA+ T GFSGADL +
Sbjct: 650 REAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEI 687
Score = 341 (125.1 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 84/224 (37%), Positives = 117/224 (52%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
EE + SL + + D+ G + +++E+V LR P F
Sbjct: 189 EEEEESLNA-VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 247
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K SP IIFIDEIDAI
Sbjct: 248 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIA 307
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R+ + + ++QLL +DG K++ +IV+AATN P S+D AL R GRFDR I +
Sbjct: 308 PKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIG 367
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +++ H + DDVDL IA + G GADLA+L
Sbjct: 368 IPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASL 411
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 344 (126.2 bits), Expect = 8.1e-31, P = 8.1e-31
Identities = 101/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 22 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 79
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 80 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 135
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E + +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 136 MSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 256 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 314
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 315 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 360
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 344 (126.2 bits), Expect = 8.1e-31, P = 8.1e-31
Identities = 101/346 (29%), Positives = 168/346 (48%)
Query: 71 ALSEYVKALVKVDRLDDSELLKTLQKGIANSARD-EESIGGISAFKNVGKPTKDGVLGTA 129
AL +Y K L++ +D LK L++ + + E+S + A ++VG+ + +
Sbjct: 8 ALQDYRKKLLEHKEIDGR--LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLT 65
Query: 130 SAPIHMVAAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQP---- 185
+ A G + R + L G ++ ++ L EV P
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLK----PGTRVALDMTTLTIMRYLPREVDPLVYN 121
Query: 186 -SLES--NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
S E + +S++ G+ E +EL E++ L +P+ F R T
Sbjct: 122 MSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+LARA+A + F S + ++G AR +R++F+ A+ PCIIF+DEIDAIGG
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ + TL +LL ++DGF + +I ATN P++LD AL+RPGR DR I
Sbjct: 242 RFSEGTSADREIQR-TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH 300
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ P+ + R I++ H + K ++D I + + GF+GADL N+
Sbjct: 301 IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV 346
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 344 (126.2 bits), Expect = 8.1e-31, P = 8.1e-31
Identities = 86/262 (32%), Positives = 129/262 (49%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I++ H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 366 (133.9 bits), Expect = 8.3e-31, P = 8.3e-31
Identities = 79/218 (36%), Positives = 121/218 (55%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
+ + D+ G+DE K+EL+E+V Y + P +F + T+LA+AIA
Sbjct: 475 HVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIA 534
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRN--PKD 306
E F S G E M+ G VRD+F A++ +PCI+F DE+D+I +R D
Sbjct: 535 NECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGD 594
Query: 307 QQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD+
Sbjct: 595 AGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPS 654
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R I+ +++ K A DVDLM +++ T GFSGADL +
Sbjct: 655 RTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEI 692
Score = 331 (121.6 bits), Expect = 8.1e-27, P = 8.1e-27
Identities = 85/246 (34%), Positives = 124/246 (50%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL ++ + D+ G + +++E+V LR P F
Sbjct: 194 EDEEESL-NDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 252
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 253 KTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 312
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ ++V+AATN P S+D AL R GRFDR I +
Sbjct: 313 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIG 372
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXV 419
PD GR +I++ H + ++DVDL I+ T G GADLA L + +
Sbjct: 373 IPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCS---EAALQAIRKKM 429
Query: 420 TMADLE 425
T+ DLE
Sbjct: 430 TLIDLE 435
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 366 (133.9 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 81/218 (37%), Positives = 118/218 (54%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N + D+ G++ K+EL+E V Y + P++F + T+LA+AIA
Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK--D 306
E F S G E M+ G VR++F A++ +PC++F DE+D+I R D
Sbjct: 537 NECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGD 596
Query: 307 QQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
LNQLL E+DG + + +I ATN P+ +D AL+RPGR D+ I +P PD E
Sbjct: 597 AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 656
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R QI +S + K A DVDL +A+ T GFSGAD+ +
Sbjct: 657 RYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEI 694
Score = 332 (121.9 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 78/212 (36%), Positives = 110/212 (51%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ DV GV + ++ E+V LR P+ F T++ARA+A E
Sbjct: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMK 311
G FF +G E G +R F A+K +P IIFIDEID+I R + +
Sbjct: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
Query: 312 MTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIME 371
++QLL +DG K +IV+ ATN P S+D AL R GRFDR I + PD GR +++
Sbjct: 327 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 386
Query: 372 SHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
H + A+DVDL +++ T G+ GADLA L
Sbjct: 387 IHTKNMKLAEDVDLERVSKDTHGYVGADLAAL 418
Score = 37 (18.1 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 545 KYGMSKEVGVVTHNYDDNGKSM 566
K+GMS GV+ + GK++
Sbjct: 509 KFGMSPSKGVLFYGPPGCGKTL 530
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 343 (125.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 86/257 (33%), Positives = 131/257 (50%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 140 DSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVA 199
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGG---SRNPK 305
F SGSE + F+G GAR VR+LF A++ +P IIF+DEID+IG +
Sbjct: 200 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGG 259
Query: 306 DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
D + + T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P+ E
Sbjct: 260 DSEVQR-TMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 318
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLE 425
R I++ H K+ ++L IA PG SGA++ + VT D E
Sbjct: 319 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 378
Query: 426 YAKDKIMMGSERKSAVI 442
A K+M K+ I
Sbjct: 379 MAVAKVMQKDSEKNMSI 395
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 155 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 214
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 215 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 274
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 275 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 334
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 335 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 394
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 395 ATEKDFLEAVNKVIKSYAKFSA 416
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 163 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 222
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 223 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 282
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 283 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 342
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 343 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 402
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 403 ATEKDFLEAVNKVIKSYAKFSA 424
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 27 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 86
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 87 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 146
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 147 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 206
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 207 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 266
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 267 ATEKDFLEAVNKVIKSYAKFSA 288
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 165 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 224
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 225 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 284
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 285 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 344
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 345 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 404
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 405 ATEKDFLEAVNKVIKSYAKFSA 426
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 84/255 (32%), Positives = 132/255 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + ++G G+R VR+LF A++ +P IIF+DEID+IG +R +
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
++ T+ +LL +LDGF+ + I V+ ATN + LD+AL+RPGR DR I PNP+ E
Sbjct: 277 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEE 336
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ +DL IA G SGA+L + VT D
Sbjct: 337 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 396
Query: 425 EYAKDKIMMGSERKS 439
E A K+M K+
Sbjct: 397 EMAVAKVMKKDTEKN 411
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 84/255 (32%), Positives = 132/255 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + ++G G+R VR+LF A++ +P IIF+DEID+IG +R +
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
++ T+ +LL +LDGF+ + I V+ ATN + LD+AL+RPGR DR I PNP+ E
Sbjct: 277 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEE 336
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I++ H K+ +DL IA G SGA+L + VT D
Sbjct: 337 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 396
Query: 425 EYAKDKIMMGSERKS 439
E A K+M K+
Sbjct: 397 EMAVAKVMKKDTEKN 411
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 342 (125.4 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 404 ATEKDFLEAVNKVIKSYAKFSA 425
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 111/395 (28%), Positives = 187/395 (47%)
Query: 48 RRNDPEAVIRLFESQPSLHSNQSALS-EYVKA-LVKVDR-LDDSELLKTL-QKGIANSAR 103
R P+A ++L + P L E +K L+ D + + E LK +K ++
Sbjct: 38 RAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSK 97
Query: 104 DEESIGGISAFKNVGKPTKDG--VLGTASAPIHMVAAEGGHFKEQLWRTIRTIALGFLLI 161
++ G + N+ + D ++ T+ H V+ K+QL ++ L +
Sbjct: 98 VDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGC-SVLLNHKVH 156
Query: 162 SGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFT 220
+ VG L +D + + E P E+ ++D+ G+D QE++E V L P+ +
Sbjct: 157 AVVGVLSDDTDPMVTV-MKLEKAPQ-ET---YADIGGLDTQIQEIKESVELPLTHPEYYE 211
Query: 221 RXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFS 280
T+LA+A+A + F GSE + ++G G + VR+LF
Sbjct: 212 EMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFR 271
Query: 281 AAKKRSPCIIFIDEIDAIGGSR---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATN 337
A++ +P I+FIDEIDA+G R N ++ ++ T+ +LL +LDGF + VI ATN
Sbjct: 272 VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATN 331
Query: 338 FPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSG 397
E+LD AL+RPGR DR I P PD + +R+I H S++ A+DV+L + SG
Sbjct: 332 RIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSG 391
Query: 398 ADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIM 432
AD+ + VT D + +K+ ++
Sbjct: 392 ADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 426
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 130 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 189
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 190 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 249
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 250 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 309
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 310 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 340
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 134 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 193
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 194 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 253
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 254 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 313
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 314 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 344
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 184 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 243
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 244 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 303
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 304 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 363
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 364 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 394
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 142 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 201
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 202 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 261
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 262 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 321
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 322 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 352
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 184 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 243
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 244 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 303
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 304 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 363
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 364 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 394
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 191 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 250
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 251 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 310
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 311 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 370
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 371 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 401
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 187 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 246
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 247 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 306
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 307 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 366
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 367 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 397
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 184 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 243
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 244 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 303
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 304 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 363
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 364 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 394
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 341 (125.1 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 187 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 246
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 247 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 306
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 307 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 366
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 367 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 397
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 363 (132.8 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 90/287 (31%), Positives = 141/287 (49%)
Query: 172 GISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXX 230
G S L E V + NT +SD+ G+ K+EL+E+V Y + P+++ +
Sbjct: 462 GKSSPSALREAVVET--PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGV 519
Query: 231 XXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCII 290
T+LA+AIA E F S G E M+ G VRD+F A+ +PC++
Sbjct: 520 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVL 579
Query: 291 FIDEIDAI----GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKAL 346
F DE+D+I GGS ++ +NQ+L E+DG + + +I ATN P+ +D A+
Sbjct: 580 FFDELDSIAKARGGSVGDAGGAADRV-INQVLTEMDGMNAKKNVFIIGATNRPDIIDPAV 638
Query: 347 VRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNI 406
+RPGR D+ I +P PD R QI ++ + K + D+DL +A+ T GFSGADL +
Sbjct: 639 LRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQR 698
Query: 407 XXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFH 453
+ E +D+ G E ++D ++T H
Sbjct: 699 ACKLAIRESIEREIRQEKE-RQDRSARGEELMEDELADPVPEITRAH 744
Score = 338 (124.0 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
EE + +L + + D+ GV + +++E+V LR P+ F
Sbjct: 197 EEEEEAL-NEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTG 255
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F+ +K SP I+FIDEIDAI
Sbjct: 256 KTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIA 315
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + K ++QLL +DG K ++VIAATN P S+D AL R GRFDR I +
Sbjct: 316 PKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIG 375
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I+ H + +DVDL +A GF GADLA+L
Sbjct: 376 IPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASL 419
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 363 (132.8 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 90/287 (31%), Positives = 141/287 (49%)
Query: 172 GISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXX 230
G S L E V + NT +SD+ G+ K+EL+E+V Y + P+++ +
Sbjct: 462 GKSSPSALREAVVET--PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGV 519
Query: 231 XXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCII 290
T+LA+AIA E F S G E M+ G VRD+F A+ +PC++
Sbjct: 520 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVL 579
Query: 291 FIDEIDAI----GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKAL 346
F DE+D+I GGS ++ +NQ+L E+DG + + +I ATN P+ +D A+
Sbjct: 580 FFDELDSIAKARGGSVGDAGGAADRV-INQVLTEMDGMNAKKNVFIIGATNRPDIIDPAV 638
Query: 347 VRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNI 406
+RPGR D+ I +P PD R QI ++ + K + D+DL +A+ T GFSGADL +
Sbjct: 639 LRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQR 698
Query: 407 XXXXXXXXXXXXVTMADLEYAKDKIMMGSERKSAVISDESRKLTAFH 453
+ E +D+ G E ++D ++T H
Sbjct: 699 ACKLAIRESIEREIRQEKE-RQDRSARGEELMEDELADPVPEITRAH 744
Score = 338 (124.0 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
EE + +L + + D+ GV + +++E+V LR P+ F
Sbjct: 197 EEEEEAL-NEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTG 255
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F+ +K SP I+FIDEIDAI
Sbjct: 256 KTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIA 315
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + K ++QLL +DG K ++VIAATN P S+D AL R GRFDR I +
Sbjct: 316 PKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIG 375
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I+ H + +DVDL +A GF GADLA+L
Sbjct: 376 IPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASL 419
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 363 (132.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 85/224 (37%), Positives = 119/224 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + ++ E+V LR P+ F
Sbjct: 203 EDEENSL-NEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTG 261
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K SP IIFIDEID+I
Sbjct: 262 KTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIA 321
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R+ + + + ++QLL +DG K ++VIAATN P S+D AL R GRFDR + +
Sbjct: 322 PKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 381
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD EGR +I+ H + ADDVDL IA T GF GAD+A+L
Sbjct: 382 VPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASL 425
Score = 341 (125.1 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 82/238 (34%), Positives = 123/238 (51%)
Query: 172 GISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXX 230
G S L E V ++ N + D+ G+D K EL+E V Y + P ++ +
Sbjct: 468 GNSNPSALRETVVENV--NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGV 525
Query: 231 XXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCII 290
T+LA+A+A E F S G E M+ G +RD+F A+ +P ++
Sbjct: 526 LFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVV 585
Query: 291 FIDEIDAI----GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKAL 346
F+DE+D+I GGS ++ +NQLL E+DG + + VI ATN P+ +D AL
Sbjct: 586 FLDELDSIAKARGGSHGDAGGASDRV-VNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAL 644
Query: 347 VRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLV 404
+RPGR D+ I VP PD R I+++ + +DL IA+ T GFSGADL+ +V
Sbjct: 645 LRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIV 702
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 363 (132.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 85/224 (37%), Positives = 119/224 (53%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + ++ E+V LR P+ F
Sbjct: 203 EDEENSL-NEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTG 261
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K SP IIFIDEID+I
Sbjct: 262 KTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIA 321
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R+ + + + ++QLL +DG K ++VIAATN P S+D AL R GRFDR + +
Sbjct: 322 PKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 381
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD EGR +I+ H + ADDVDL IA T GF GAD+A+L
Sbjct: 382 VPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASL 425
Score = 341 (125.1 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 82/238 (34%), Positives = 123/238 (51%)
Query: 172 GISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXX 230
G S L E V ++ N + D+ G+D K EL+E V Y + P ++ +
Sbjct: 468 GNSNPSALRETVVENV--NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGV 525
Query: 231 XXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCII 290
T+LA+A+A E F S G E M+ G +RD+F A+ +P ++
Sbjct: 526 LFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVV 585
Query: 291 FIDEIDAI----GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKAL 346
F+DE+D+I GGS ++ +NQLL E+DG + + VI ATN P+ +D AL
Sbjct: 586 FLDELDSIAKARGGSHGDAGGASDRV-VNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAL 644
Query: 347 VRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLV 404
+RPGR D+ I VP PD R I+++ + +DL IA+ T GFSGADL+ +V
Sbjct: 645 LRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIV 702
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 340 (124.7 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 84/241 (34%), Positives = 127/241 (52%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N K++D+ G+D KQE++E V L P+ + + TML +A+A
Sbjct: 134 NVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVA 193
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
E V F GSEF + ++G G R VRD+F A++ SP IIFIDE+DAI R
Sbjct: 194 NETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTG 253
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D++ ++ L +LL ++DGF ++ + VI ATN ++LD AL+RPGR DR I P PD +
Sbjct: 254 ADREVQRILL-ELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRK 312
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
+R I ++ +SK+ + DV++ T S AD+A + +T D
Sbjct: 313 QKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDF 372
Query: 425 E 425
E
Sbjct: 373 E 373
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 340 (124.7 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 82/211 (38%), Positives = 121/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 149 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 208
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD FS AK+++P IIFIDE+DAIG R ++
Sbjct: 209 TKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGD 268
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 269 REVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 328
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ + DV+ +AR T F+GA
Sbjct: 329 RIMQIHSRKMNVSPDVNYEELARCTDDFNGA 359
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 340 (124.7 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 84/241 (34%), Positives = 127/241 (52%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N K++D+ G+D KQE++E V L P+ + + TML +A+A
Sbjct: 134 NVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVA 193
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
E V F GSEF + ++G G R VRD+F A++ SP IIFIDE+DAI R
Sbjct: 194 NETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTG 253
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D++ ++ L +LL ++DGF ++ + VI ATN ++LD AL+RPGR DR I P PD +
Sbjct: 254 ADREVQRILL-ELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRK 312
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
+R I ++ +SK+ + DV++ T S AD+A + +T D
Sbjct: 313 QKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDF 372
Query: 425 E 425
E
Sbjct: 373 E 373
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 340 (124.7 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 82/211 (38%), Positives = 121/211 (57%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E IV + ++F T+LARA A +
Sbjct: 172 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 231
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ--- 307
F +G + +MF+G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++
Sbjct: 232 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 291
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF+ N + VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 292 REVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 351
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGA 398
+IM+ H K+ DV+ +AR T F+GA
Sbjct: 352 RIMQIHSRKMNVCPDVNFEELARCTDDFNGA 382
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 339 (124.4 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 85/259 (32%), Positives = 130/259 (50%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + + G+D+ +E++E++ L+ P+ F T+LARA+A
Sbjct: 128 DSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F SGSE + ++G G+R VR+LF A++ +P IIF+DEID+IG SR
Sbjct: 188 HHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGS 247
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D + + T+ +LL +LDGF+ + I +I ATN + LD AL+RPGR DR I P P VE
Sbjct: 248 GDSEVQR-TMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVE 306
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R I+ H + ++L IA G SGA+L + VT D
Sbjct: 307 ARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDF 366
Query: 425 EYAKDKIMMGSERKSAVIS 443
+ A KI+ + K +S
Sbjct: 367 DLATAKILNKHDDKEVAVS 385
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 339 (124.4 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 78/219 (35%), Positives = 116/219 (52%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
+ + ++ G+ +EL E+V L P+ F R T+LARAIA
Sbjct: 133 SVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIA 192
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR----NP 304
F S + ++G AR +R++F A+ PC+IF+DEIDAIGG R
Sbjct: 193 SNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTS 252
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
D++ + TL +LL ++DGF + +I ATN P+ LD AL+RPGR DR I +P P+
Sbjct: 253 ADREIQR-TLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEA 311
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
GR +++ H + + K DVD IA+ GF+ ADL N+
Sbjct: 312 GRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNV 350
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 364 (133.2 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 80/213 (37%), Positives = 118/213 (55%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKR-FTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G++E K++L+E + Y + K + + T+LA+AIA E
Sbjct: 933 WNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANEC 992
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK-DQQYM 310
F S G E M+ G VRDLF A+ SPCIIF DEID++ RN +
Sbjct: 993 KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDAS 1052
Query: 311 KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIM 370
+NQ+L E+DG + + I +IAATN P+ LDKAL RPGR D+ I + PD++ R I
Sbjct: 1053 DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIF 1112
Query: 371 ESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
++ + +DVD+ +A+ T GFSGAD+ NL
Sbjct: 1113 KAILKNTPLNEDVDIHDMAKRTEGFSGADITNL 1145
Score = 341 (125.1 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 74/212 (34%), Positives = 118/212 (55%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+ + ++ E++ L+ P+ F T +A+AIA E+
Sbjct: 526 YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANES 585
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMK 311
+ +G E +G +++R +F A +++PCIIFIDEID+I R+ + + K
Sbjct: 586 NAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK 645
Query: 312 MTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIME 371
++QLL +DG K+N ++V+AATN P S+D AL R GRFDR I +P PD +GR +I+
Sbjct: 646 RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILL 705
Query: 372 SHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ K+ DV+L IA+ G+ GADLA L
Sbjct: 706 TKTKKMKLDPDVNLRKIAKECHGYVGADLAQL 737
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 364 (133.2 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 80/213 (37%), Positives = 118/213 (55%)
Query: 193 FSDVKGVDEAKQELEEIVHYLRDPKR-FTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
++D+ G++E K++L+E + Y + K + + T+LA+AIA E
Sbjct: 933 WNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANEC 992
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK-DQQYM 310
F S G E M+ G VRDLF A+ SPCIIF DEID++ RN +
Sbjct: 993 KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDAS 1052
Query: 311 KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIM 370
+NQ+L E+DG + + I +IAATN P+ LDKAL RPGR D+ I + PD++ R I
Sbjct: 1053 DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIF 1112
Query: 371 ESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
++ + +DVD+ +A+ T GFSGAD+ NL
Sbjct: 1113 KAILKNTPLNEDVDIHDMAKRTEGFSGADITNL 1145
Score = 341 (125.1 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 74/212 (34%), Positives = 118/212 (55%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+ + ++ E++ L+ P+ F T +A+AIA E+
Sbjct: 526 YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANES 585
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMK 311
+ +G E +G +++R +F A +++PCIIFIDEID+I R+ + + K
Sbjct: 586 NAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK 645
Query: 312 MTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIME 371
++QLL +DG K+N ++V+AATN P S+D AL R GRFDR I +P PD +GR +I+
Sbjct: 646 RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILL 705
Query: 372 SHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ K+ DV+L IA+ G+ GADLA L
Sbjct: 706 TKTKKMKLDPDVNLRKIAKECHGYVGADLAQL 737
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 354 (129.7 bits), Expect = 3.6e-30, P = 3.6e-30
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 208 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 267
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 268 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 327
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 328 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 387
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 388 ILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEI 422
Score = 284 (105.0 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 63/145 (43%), Positives = 82/145 (56%)
Query: 259 SGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLL 318
SG E G +R F A+K +P IIFIDE+DAI R + + ++QLL
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 61
Query: 319 VELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKVL 378
+DG KQ +IV+AATN P S+D AL R GRFDR + + PD GR +I++ H +
Sbjct: 62 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMK 121
Query: 379 KADDVDLMIIARGTPGFSGADLANL 403
ADDVDL + T G GADLA L
Sbjct: 122 LADDVDLEQVGNETHGHVGADLAAL 146
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 342 (125.4 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 84/252 (33%), Positives = 123/252 (48%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+SDV G + ++L E+V L P+RF T+ ARA+A
Sbjct: 208 YSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRT 267
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPKDQQ 308
F GSE + +VG GAR VR+LF A+ + CIIF DEIDA+GG+R
Sbjct: 268 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDN 327
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +L+ +LDGF I V+ ATN P +LD AL+RPGR DR + PD+EGR
Sbjct: 328 EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRAN 387
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAK 428
I H + + +I+R P +GA+L ++ T D A
Sbjct: 388 IFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAV 447
Query: 429 DKIMMGSERKSA 440
DK++ G ++ S+
Sbjct: 448 DKVISGYKKFSS 459
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 360 (131.8 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 77/218 (35%), Positives = 122/218 (55%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N + D+ G+D+ K+EL+E+V Y + P +F + T+LA+AIA
Sbjct: 473 NITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKD 306
E F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGD 592
Query: 307 QQ-YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD +
Sbjct: 593 GGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R I+++++ K + DVDL +A+ T GFSGADL +
Sbjct: 653 RIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEI 690
Score = 348 (127.6 bits), Expect = 9.7e-29, P = 9.7e-29
Identities = 84/224 (37%), Positives = 117/224 (52%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ GV + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 414
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 360 (131.8 bits), Expect = 4.5e-30, P = 4.5e-30
Identities = 85/238 (35%), Positives = 125/238 (52%)
Query: 172 GISKGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXX 230
G S L E V S+ N + DV G+DE K+EL+E V Y + P ++T+
Sbjct: 467 GNSNPSALRETVVESV--NVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGV 524
Query: 231 XXXXXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCII 290
T+LA+A+A E F S G E M+ G +RD+F A+ +P ++
Sbjct: 525 LFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVV 584
Query: 291 FIDEIDAI----GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKAL 346
F+DE+D+I GGS ++ +NQLL E+DG + + VI ATN P+ +D A+
Sbjct: 585 FLDELDSIAKARGGSLGDAGGASDRV-VNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAI 643
Query: 347 VRPGRFDRHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLV 404
+RPGR D+ I VP PD R I+ + + K ++L IA+ T GFSGADL +V
Sbjct: 644 LRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIV 701
Score = 347 (127.2 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 79/230 (34%), Positives = 120/230 (52%)
Query: 175 KGLGLHEEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXX 233
+G ++ E + + + + D+ G + ++ E+V LR P+ F
Sbjct: 195 EGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMY 254
Query: 234 XXXXXXXTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFID 293
T++ARA+A E G FF +G E G +R F A+K +P IIFID
Sbjct: 255 GPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFID 314
Query: 294 EIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFD 353
EID+I R+ + + + ++QLL +DG K ++VIAATN P S+D AL R GRFD
Sbjct: 315 EIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFD 374
Query: 354 RHIVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R + + PD GR +++ H + ADDVDL +A T G+ GAD+A+L
Sbjct: 375 REVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASL 424
Score = 42 (19.8 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 544 TKYGMSKEVGVVTHNYDDNGKSM 566
TK+G+S GV+ + GK++
Sbjct: 514 TKFGLSPSKGVLFYGPPGTGKTL 536
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 337 (123.7 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 78/212 (36%), Positives = 120/212 (56%)
Query: 193 FSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+SDV G+D+ +EL E IV ++ +F T+LARA A +
Sbjct: 180 YSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQT 239
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ---Q 308
F + + +M++G GA+ VRD F+ AK+++P IIFIDE+DAIG R ++ +
Sbjct: 240 NATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDR 299
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
++ T+ +LL +LDGF ++ + V+AATN + LD AL+R GR DR I P P + R Q
Sbjct: 300 EVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQ 359
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
I++ H K+ DD++ +AR T F+GA L
Sbjct: 360 ILQIHSRKMTTDDDINWQELARSTDEFNGAQL 391
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 359 (131.4 bits), Expect = 5.4e-30, P = 5.4e-30
Identities = 78/217 (35%), Positives = 123/217 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 369 IMESHMSK--VLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K V KA DVDL +A+ T GFSGADL +
Sbjct: 656 ILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEI 692
Score = 343 (125.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 414
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 357 (130.7 bits), Expect = 9.2e-30, P = 9.2e-30
Identities = 77/219 (35%), Positives = 118/219 (53%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N ++D+ G++ K+EL+E V Y + P++F + T+LA+AIA
Sbjct: 476 NVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAI----GGSRNP 304
E F S G E M+ G VR++F A++ +PC++F DE+D+I GG
Sbjct: 536 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGG 595
Query: 305 KDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
LNQLL E+DG + + +I ATN P+ +D AL+RPGR D+ I +P PD +
Sbjct: 596 DGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDED 655
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R I ++ + K A DVD+ +A+ T GFSGAD+ +
Sbjct: 656 SRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEI 694
Score = 335 (123.0 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 79/212 (37%), Positives = 111/212 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ DV GV + ++ E+V LR P+ F T++ARA+A E
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMK 311
G FF +G E G +R F A+K +P IIFIDEID+I R + + +
Sbjct: 266 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVER 325
Query: 312 MTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIME 371
++QLL +DG K +IV+ ATN P S+D AL R GRFDR I + PD GR +++
Sbjct: 326 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 385
Query: 372 SHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
H + A+DVDL I++ T G+ GADLA L
Sbjct: 386 IHTKNMKLAEDVDLERISKDTHGYVGADLAAL 417
Score = 37 (18.1 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 545 KYGMSKEVGVVTHNYDDNGKSM 566
K+GMS GV+ + GK++
Sbjct: 508 KFGMSPSKGVLFYGPPGCGKTL 529
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 117/420 (27%), Positives = 190/420 (45%)
Query: 27 LARRVRDADEASEVAHLRELYRRNDPEAVIRLFESQPSLHSNQSALSEYVKALVKVDRLD 86
+ R+ R A S + L +++ + +R Q +H + EYV+ + ++ R
Sbjct: 37 IGRKKRKAAGPSTASKLPDIFPTS--RCKLRYLRMQ-RVHDHLLLEEEYVENMERL-RKA 92
Query: 87 DSELLKTLQKG---IANSARDEESI-----GGISAFKNVGKPTKD--GVLGTASAPIHMV 136
+ + +G I + DE S G N+ + D ++ +A+ P + V
Sbjct: 93 KASASDSANRGDVDITDRNADERSRVDDMRGSPMGVGNLEELIDDDHAIVSSATGPEYYV 152
Query: 137 AAEGGHFKEQLWRTIRTIALGFLLISGVGALIEDRGISKGLGLHEEVQPSLESNTKFSDV 196
+ K+ L +I L +S VG L E+ + + + P+ ES ++D+
Sbjct: 153 SIMSFVDKDLL-EPGASILLHHKTVSVVGVLTEESDPLVSV-MKLDKAPT-ES---YADI 206
Query: 197 KGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEAGVPF 255
G++ QE+ E V L P+ + T+LA+A+A + F
Sbjct: 207 GGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF 266
Query: 256 FSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---QQYMKM 312
GSE + ++G G R VR +F A + +P I+FIDEIDAIG R ++ ++
Sbjct: 267 LRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGGEREIQR 326
Query: 313 TLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMES 372
T+ +LL +LDGF + VI ATN E+LD AL+RPGR DR I+ NPD +++I
Sbjct: 327 TMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTKKKIFTL 386
Query: 373 HMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLEYAKDKIM 432
H SK+ DDVDL SGAD+ + V M D A+++IM
Sbjct: 387 HTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERRMRVQMDDFRAARERIM 446
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 342 (125.4 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 86/262 (32%), Positives = 128/262 (48%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
+Q + + +SDV G E ++L E+V L P+RF T
Sbjct: 206 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 265
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
+ ARA+A F GSE + +VG GAR VR+LF A+ + C+IF DEIDAIGG+
Sbjct: 266 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 325
Query: 302 R---NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVV 358
R ++ T+ +L+ +LDGF I V+ ATN P++LD AL+RPGR DR I
Sbjct: 326 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 385
Query: 359 PNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXX 418
PD+EGR I + H + D+ ++AR P +GA++ ++
Sbjct: 386 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 445
Query: 419 VTMADLEYAKDKIMMGSERKSA 440
T D A +K++ + SA
Sbjct: 446 ATEKDFLEAVNKVIKSYAKFSA 467
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 355 (130.0 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690
Score = 343 (125.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 414
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 355 (130.0 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690
Score = 343 (125.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 414
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 355 (130.0 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690
Score = 343 (125.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 414
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 355 (130.0 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690
Score = 343 (125.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 414
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 355 (130.0 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690
Score = 343 (125.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 414
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 355 (130.0 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 492 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 551
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 552 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 611
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 612 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 671
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 672 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 706
Score = 343 (125.8 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 208 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 266
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 267 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 326
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 327 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 386
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 387 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 430
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 332 (121.9 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 82/248 (33%), Positives = 126/248 (50%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+++ +E++E++ ++ P+ F T+LARA+A
Sbjct: 141 DSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD-- 306
F SGSE + ++G G+R VR+LF A++ +P IIF+DEID+IG SR+
Sbjct: 201 HHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGG 260
Query: 307 --QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
++ T+ +LL +LDGF+ + I VI ATN + LD AL+RPGR DR I P P E
Sbjct: 261 SGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAE 320
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
R +I+ H + +DL IA G SGA+L + VT D
Sbjct: 321 ARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDF 380
Query: 425 EYAKDKIM 432
E A K++
Sbjct: 381 ELAVAKVL 388
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 354 (129.7 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 474 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 534 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 593
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 594 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 653
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 654 ILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEI 688
Score = 261 (96.9 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 73/224 (32%), Positives = 104/224 (46%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G G R S A D
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFP 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
+ + + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 SPQTHGEVE--RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 368
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 369 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 412
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 354 (129.7 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIA 655
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 656 ILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEI 690
Score = 338 (124.0 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 82/224 (36%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + +DDVDL +A T G GADLA L
Sbjct: 371 IPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAAL 414
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 354 (129.7 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 77/218 (35%), Positives = 117/218 (53%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N + D+ G++ K+EL+E V Y + P++F + T+LA+AIA
Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR-NPKDQ 307
E F S G E M+ G VR++F A++ +PC++F DE+D+I R N
Sbjct: 536 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGD 595
Query: 308 Q--YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
LNQLL E+DG + + +I ATN P+ +D AL+RPGR D+ I +P PD +
Sbjct: 596 AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS 655
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R I ++ + K A DVD+ +A+ T GFSGAD+ +
Sbjct: 656 RLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEI 693
Score = 335 (123.0 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 79/212 (37%), Positives = 111/212 (52%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ DV GV + ++ E+V LR P+ F T++ARA+A E
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMK 311
G FF +G E G +R F A+K +P IIFIDEID+I R + + +
Sbjct: 266 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVER 325
Query: 312 MTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIME 371
++QLL +DG K +IV+ ATN P S+D AL R GRFDR I + PD GR +++
Sbjct: 326 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 385
Query: 372 SHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
H + A+DVDL I++ T G+ GADLA L
Sbjct: 386 IHTKNMKLAEDVDLERISKDTHGYVGADLAAL 417
Score = 37 (18.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 545 KYGMSKEVGVVTHNYDDNGKSM 566
K+GMS GV+ + GK++
Sbjct: 508 KFGMSPSKGVLFYGPPGCGKTL 529
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 354 (129.7 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 76/215 (35%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+E+V Y + P +F + T+LA+AIA E
Sbjct: 480 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 539
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 540 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 599
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 600 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 659
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 660 ILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEI 694
Score = 325 (119.5 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 83/228 (36%), Positives = 117/228 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F +K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIA 310
Query: 300 GSRN-PKDQQYMKMT---LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRH 355
P Q + ++ ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR
Sbjct: 311 SDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 370
Query: 356 IVVPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
+ + PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 418
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 354 (129.7 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 81/218 (37%), Positives = 117/218 (53%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHYLRD-PKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N K+ D+ G+DE K L E++ Y D P +F + T+LA+A+A
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK--D 306
E F S G E M+ G VR++F A+ +PC++F DE+D+IG R D
Sbjct: 536 SECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGD 595
Query: 307 QQYM-KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
+NQLL E+DG + + I ATN PE LD+AL+RPGR D+ I +P PD+
Sbjct: 596 GSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGA 655
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R I+ + + K A++V + +A+ T GFSGADLA L
Sbjct: 656 RISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAEL 693
Score = 313 (115.2 bits), Expect = 8.8e-25, P = 8.8e-25
Identities = 77/212 (36%), Positives = 105/212 (49%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G + ++ E++ LR P F T +ARA+A E
Sbjct: 206 YDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANET 265
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMK 311
G FF +G E G +R F A+K SP IIFIDEID+I R + + +
Sbjct: 266 GAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 325
Query: 312 MTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIME 371
++QLL +DG K ++VIAATN S+D AL R GRFDR I + PD GR +I+
Sbjct: 326 RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILR 385
Query: 372 SHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
H + + DV L +A T GF GADLA L
Sbjct: 386 IHTKNMKLSPDVKLEELASNTHGFVGADLAQL 417
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 354 (129.7 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 81/218 (37%), Positives = 117/218 (53%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHYLRD-PKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
N K+ D+ G+DE K L E++ Y D P +F + T+LA+A+A
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPK--D 306
E F S G E M+ G VR++F A+ +PC++F DE+D+IG R D
Sbjct: 536 SECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGD 595
Query: 307 QQYM-KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
+NQLL E+DG + + I ATN PE LD+AL+RPGR D+ I +P PD+
Sbjct: 596 GSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGA 655
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
R I+ + + K A++V + +A+ T GFSGADLA L
Sbjct: 656 RISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAEL 693
Score = 313 (115.2 bits), Expect = 8.8e-25, P = 8.8e-25
Identities = 77/212 (36%), Positives = 105/212 (49%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G + ++ E++ LR P F T +ARA+A E
Sbjct: 206 YDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANET 265
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMK 311
G FF +G E G +R F A+K SP IIFIDEID+I R + + +
Sbjct: 266 GAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 325
Query: 312 MTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIME 371
++QLL +DG K ++VIAATN S+D AL R GRFDR I + PD GR +I+
Sbjct: 326 RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILR 385
Query: 372 SHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
H + + DV L +A T GF GADLA L
Sbjct: 386 IHTKNMKLSPDVKLEELASNTHGFVGADLAQL 417
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 330 (121.2 bits), Expect = 2.9e-29, P = 2.9e-29
Identities = 82/247 (33%), Positives = 127/247 (51%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 140 DSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR---NPK 305
F SGSE + ++G G+R VR+LF A++ +P IIF+DEID+IG SR +
Sbjct: 200 HHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG 259
Query: 306 DQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 365
++ T+ +LL +LDGF+ ++ I +I ATN + LD AL+RPGR DR I P P V
Sbjct: 260 GDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAA 319
Query: 366 RRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADLE 425
R I++ H + ++L IA G SGAD+ + VT D E
Sbjct: 320 RTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 379
Query: 426 YAKDKIM 432
A K+M
Sbjct: 380 LAVAKVM 386
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 330 (121.2 bits), Expect = 2.9e-29, P = 2.9e-29
Identities = 80/213 (37%), Positives = 119/213 (55%)
Query: 192 KFSDVKGVDEAKQEL-EEIVHYLRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGE 250
++SD+ G+D+ QEL E +V + +RF T+LARA A +
Sbjct: 166 EYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQ 225
Query: 251 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKD---Q 307
+ +G + +MF+G GA+ VRD F+ AK++ P IIFIDE+DAIG R +
Sbjct: 226 TNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGD 285
Query: 308 QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRR 367
+ ++ T+ +LL +LDGF + I VIAATN + LD AL+R GR DR I P P+ E R
Sbjct: 286 REVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARA 345
Query: 368 QIMESHMSKVLKADDVDLMIIARGTPGFSGADL 400
I++ H K+ + DV+ +AR + F+GA L
Sbjct: 346 HILQIHSRKMNVSADVNFDELARSSEDFNGAQL 378
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 352 (129.0 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 75/215 (34%), Positives = 121/215 (56%)
Query: 193 FSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIAGEA 251
+ D+ G+++ K+EL+++V Y + P +F + T+LA+AIA E
Sbjct: 476 WEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 252 GVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSR--NPKDQQ- 308
F S G E M+ G VR++F A++ +PC++F DE+D+I +R N D
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 309 YMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 368
+NQ+L E+DG + + +I ATN P+ +D A++RPGR D+ I +P PD + R
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 369 IMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
I+++++ K A DVDL +A+ T GFSGADL +
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690
Score = 343 (125.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 83/224 (37%), Positives = 116/224 (51%)
Query: 181 EEVQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXX 239
E+ + SL + + D+ G + +++E+V LR P F
Sbjct: 192 EDEEESL-NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 240 XTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIG 299
T++ARA+A E G FF +G E G +R F A+K +P IIFIDE+DAI
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 300 GSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVP 359
R + + ++QLL +DG KQ +IV+AATN P S+D AL R GRFDR + +
Sbjct: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 360 NPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANL 403
PD GR +I++ H + ADDVDL +A T G GADLA L
Sbjct: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 414
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 329 (120.9 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 83/258 (32%), Positives = 131/258 (50%)
Query: 190 NTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXTMLARAIA 248
++ + V G+D+ +E++E++ ++ P+ F T+LARA+A
Sbjct: 141 DSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 200
Query: 249 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQ- 307
F SGSE + ++G G+R VR+LF A++ +P IIF+DEID+IG SR
Sbjct: 201 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSG 260
Query: 308 ---QYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVE 364
++ T+ +LL +LDGF+ + I V+ TN + LD AL+RPGR DR I PNP
Sbjct: 261 GGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDA 320
Query: 365 GRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXXXVTMADL 424
GR I++ H K+ ++L I+ G SGA+L + V+ D
Sbjct: 321 GRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDF 380
Query: 425 EYAKDKIMM-GSERKSAV 441
E A K+M SE+ ++
Sbjct: 381 EMAVSKVMKKDSEQNMSI 398
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 329 (120.9 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 86/255 (33%), Positives = 127/255 (49%)
Query: 183 VQPSLESNTKFSDVKGVDEAKQELEEIVHY-LRDPKRFTRXXXXXXXXXXXXXXXXXXXT 241
++P + + + D+ G+D KQE+ E V L + + + T
Sbjct: 150 LRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKT 209
Query: 242 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGS 301
MLA+A+A F GSEF + ++G G R VRD+F AK+ SP IIFIDEIDAI
Sbjct: 210 MLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATK 269
Query: 302 R----NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIV 357
R D++ ++ L +LL ++DGF Q+ + VI ATN ++LD AL+RPGR DR I
Sbjct: 270 RFDAQTGADREVQRILL-ELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIE 328
Query: 358 VPNPDVEGRRQIMESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNIXXXXXXXXXXX 417
P PD +R + + S++ +DDVDL SGAD+ ++
Sbjct: 329 FPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRY 388
Query: 418 XVTMADLEYAKDKIM 432
V DLE A ++
Sbjct: 389 VVLTKDLEKAYKNVV 403
WARNING: HSPs involving 407 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 685 571 0.00080 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 657
No. of states in DFA: 607 (65 KB)
Total size of DFA: 257 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.24u 0.09s 45.33t Elapsed: 00:00:02
Total cpu time: 45.30u 0.09s 45.39t Elapsed: 00:00:02
Start: Thu May 9 18:07:50 2013 End: Thu May 9 18:07:52 2013
WARNINGS ISSUED: 2