Your job contains 1 sequence.
>005667
MPSRGVNMKSNCSRQYLREYLKMTFFVGTKSNIVPFVDCCFNLIHLHSQSSNSNRYPLQF
TSNSLKSLNEFSLLTSLNDPLNPIFKPLFSVFPFLFFFLFFPREKLIIPALMAAAAAALR
SKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVINTPYHFTSFRPVSL
RGELVEKGSQLCTDNAKCQKLTGGSSSITSSYGDPPEVWQPPGDGIAVRVNGQGPNLVRG
GGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI
YNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVI
ADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDV
SGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERR
QDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLAL
TENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLE
NILMDAMYEIPDVRAGDEVIDAVVVDEEAVGSEDRGCGAKILYGKGALDRYLAQHKRKDL
ETNVAGADGEPEMETEIPSIVASM
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005667
(684 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154257 - symbol:CLPX "CLP protease regulatory... 1939 2.5e-200 1
TAIR|locus:2006942 - symbol:AT1G33360 species:3702 "Arabi... 1532 3.3e-157 1
TAIR|locus:2155446 - symbol:AT5G49840 species:3702 "Arabi... 1310 5.2e-136 2
TIGR_CMR|SO_1795 - symbol:SO_1795 "ATP-dependent Clp prot... 894 1.2e-102 2
TIGR_CMR|CBU_0739 - symbol:CBU_0739 "ATP-dependent Clp pr... 872 1.6e-100 2
TIGR_CMR|CHY_0326 - symbol:CHY_0326 "ATP-dependent Clp pr... 880 2.3e-99 2
UNIPROTKB|P0A6H1 - symbol:clpX "ClpX" species:83333 "Esch... 859 3.3e-98 2
UNIPROTKB|P0CAU2 - symbol:clpX "ATP-dependent Clp proteas... 860 5.3e-98 2
TIGR_CMR|SPO_1004 - symbol:SPO_1004 "ATP-dependent Clp pr... 972 7.4e-98 1
TIGR_CMR|CPS_3784 - symbol:CPS_3784 "ATP-dependent Clp pr... 853 1.3e-96 2
UNIPROTKB|Q9KQS7 - symbol:clpX "ATP-dependent Clp proteas... 957 2.9e-96 1
TIGR_CMR|VC_1921 - symbol:VC_1921 "ATP-dependent Clp prot... 957 2.9e-96 1
TIGR_CMR|GSU_1791 - symbol:GSU_1791 "ATP-dependent Clp pr... 838 1.8e-95 2
TIGR_CMR|APH_0969 - symbol:APH_0969 "ATP-dependent Clp pr... 827 1.4e-93 2
TIGR_CMR|ECH_0900 - symbol:ECH_0900 "ATP-dependent Clp pr... 813 6.2e-93 2
TIGR_CMR|BA_4704 - symbol:BA_4704 "ATP-dependent Clp prot... 823 1.3e-92 2
UNIPROTKB|P0A528 - symbol:clpX "ATP-dependent Clp proteas... 907 5.7e-91 1
MGI|MGI:1346017 - symbol:Clpx "caseinolytic peptidase X (... 783 1.3e-90 2
UNIPROTKB|E2QSS3 - symbol:CLPX "Uncharacterized protein" ... 783 2.1e-90 2
UNIPROTKB|F1N155 - symbol:CLPX "Uncharacterized protein" ... 782 2.7e-90 2
UNIPROTKB|O76031 - symbol:CLPX "ATP-dependent Clp proteas... 782 2.7e-90 2
UNIPROTKB|F1SJL5 - symbol:CLPX "Uncharacterized protein" ... 782 2.7e-90 2
RGD|1304883 - symbol:Clpx "ClpX caseinolytic peptidase X ... 781 3.4e-90 2
UNIPROTKB|Q5U2U0 - symbol:Clpx "ATP-dependent Clp proteas... 781 3.4e-90 2
UNIPROTKB|F1NA92 - symbol:CLPX "Uncharacterized protein" ... 780 1.2e-89 2
TIGR_CMR|CJE_0324 - symbol:CJE_0324 "ATP-dependent Clp pr... 894 1.4e-89 1
ZFIN|ZDB-GENE-040912-143 - symbol:clpx "ClpX caseinolytic... 768 3.0e-89 2
UNIPROTKB|E1BX77 - symbol:CLPX "Uncharacterized protein" ... 771 1.0e-88 2
TIGR_CMR|NSE_0753 - symbol:NSE_0753 "ATP-dependent Clp pr... 874 1.8e-87 1
FB|FBgn0038745 - symbol:CG4538 species:7227 "Drosophila m... 746 6.5e-74 1
SGD|S000000431 - symbol:MCX1 "Mitochondrial matrix protei... 393 1.5e-71 3
ASPGD|ASPL0000057717 - symbol:AN0349 species:162425 "Emer... 339 9.2e-67 4
WB|WBGene00019461 - symbol:K07A3.3 species:6239 "Caenorha... 575 2.3e-66 2
WB|WBGene00008412 - symbol:D2030.2 species:6239 "Caenorha... 664 3.2e-65 1
TIGR_CMR|CHY_1790 - symbol:CHY_1790 "heat shock protein H... 185 1.1e-33 4
TIGR_CMR|SO_4163 - symbol:SO_4163 "heat shock protein Hsl... 163 2.4e-32 4
TIGR_CMR|NSE_0177 - symbol:NSE_0177 "heat shock protein H... 161 1.0e-29 4
UNIPROTKB|P0A6H5 - symbol:hslU species:83333 "Escherichia... 171 1.0e-25 3
UNIPROTKB|Q9KNQ7 - symbol:hslU "ATP-dependent protease AT... 165 5.1e-25 3
TIGR_CMR|VC_2674 - symbol:VC_2674 "protease HslVU, ATPase... 165 5.1e-25 3
TIGR_CMR|CBU_2012 - symbol:CBU_2012 "heat shock protein H... 170 7.4e-25 3
TIGR_CMR|CJE_0764 - symbol:CJE_0764 "heat shock protein H... 164 1.0e-24 3
TIGR_CMR|CPS_4370 - symbol:CPS_4370 "heat shock protein H... 170 1.2e-23 3
TIGR_CMR|SPO_3882 - symbol:SPO_3882 "heat shock protein H... 159 1.9e-23 3
UNIPROTKB|P43773 - symbol:hslU "ATP-dependent protease AT... 156 2.0e-22 3
DICTYBASE|DDB_G0288593 - symbol:DDB_G0288593 "ATP-depende... 162 2.2e-22 3
TIGR_CMR|APH_1074 - symbol:APH_1074 "ATP-dependent Hsl pr... 163 4.9e-22 3
TIGR_CMR|ECH_0997 - symbol:ECH_0997 "heat shock protein H... 153 1.1e-21 3
TIGR_CMR|CHY_2164 - symbol:CHY_2164 "ATPase, AAA family" ... 148 4.0e-07 1
UNIPROTKB|I3LI39 - symbol:I3LI39 "Uncharacterized protein... 121 1.5e-06 1
UNIPROTKB|H0YM48 - symbol:CLPX "ATP-dependent Clp proteas... 138 1.8e-06 1
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 136 2.5e-05 1
FB|FBgn0031519 - symbol:CG3326 species:7227 "Drosophila m... 128 9.3e-05 1
ZFIN|ZDB-GENE-030131-5083 - symbol:psmc4 "proteasome (pro... 126 0.00011 1
UNIPROTKB|F1LZ09 - symbol:F1LZ09 "Uncharacterized protein... 121 0.00031 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 121 0.00031 2
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 120 0.00046 1
ZFIN|ZDB-GENE-040426-2331 - symbol:spast "spastin" specie... 122 0.00048 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 124 0.00051 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 124 0.00051 1
UNIPROTKB|B7PXE3 - symbol:spas "Spastin" species:6945 "Ix... 121 0.00073 1
UNIPROTKB|Q7QBW0 - symbol:spas "Spastin" species:7165 "An... 122 0.00078 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 122 0.00081 1
UNIPROTKB|Q6AZT2 - symbol:spast "Spastin" species:8355 "X... 120 0.00084 1
UNIPROTKB|Q05AS3 - symbol:spast "Spastin" species:8364 "X... 120 0.00085 1
UNIPROTKB|B4K799 - symbol:spas "Spastin" species:7230 "Dr... 121 0.00090 1
DICTYBASE|DDB_G0287165 - symbol:DDB_G0287165 "spastin-lik... 120 0.00095 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 117 0.00099 1
>TAIR|locus:2154257 [details] [associations]
symbol:CLPX "CLP protease regulatory subunit X"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0006457
GO:GO:0006508 GO:GO:0017111 EMBL:AB013388 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 HSSP:O25926
ProtClustDB:CLSN2690007 EMBL:AY035103 EMBL:AY142561 IPI:IPI00536799
RefSeq:NP_568792.1 UniGene:At.21717 ProteinModelPortal:Q9FK07
SMR:Q9FK07 STRING:Q9FK07 PRIDE:Q9FK07 EnsemblPlants:AT5G53350.1
GeneID:835416 KEGG:ath:AT5G53350 TAIR:At5g53350 InParanoid:Q9FK07
OMA:NCRSAYF PhylomeDB:Q9FK07 ArrayExpress:Q9FK07
Genevestigator:Q9FK07 Uniprot:Q9FK07
Length = 579
Score = 1939 (687.6 bits), Expect = 2.5e-200, P = 2.5e-200
Identities = 405/570 (71%), Positives = 442/570 (77%)
Query: 128 TTSLTVSQFRYLMLSYMHAGRVASSS-RCAHRSKWDDHVINTPYHFTSFRPVSL--RGEL 184
T SLT+S FRY + + +H R A+S C HRSK D+ PY +S L RG
Sbjct: 13 TASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKF---PYKISSLGTSFLDNRGGG 69
Query: 185 VEKGSQLCTDNAKCQKLXXXXXXXXXXYGDPPEVWQPPGDGIAVRVNGQGPNLVRXXXXX 244
+ S C K GDPP++WQPPGDG++VRVNG NL R
Sbjct: 70 ERRNSTKCYAAQKKLSGVGSSVVILSSQGDPPDLWQPPGDGVSVRVNGSSVNLGRGGGGG 129
Query: 245 XXX--------XXXXKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNH 296
K+ CWGGSNLG+ FPTPKEICKGL+KFVIGQERAKKVLSVAVYNH
Sbjct: 130 GSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNH 189
Query: 297 YMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNV 356
Y RIY+ESSQKRSAGE+ S DDD VELEKSNILLMGPTGSGKTLLAKTLAR+VNV
Sbjct: 190 YKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNV 249
Query: 357 PFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNI 416
PFVIADATTLTQAGYVGEDVESILYKLLTV+DYNVAAAQQGIVYIDEVDKITKKAESLNI
Sbjct: 250 PFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNI 309
Query: 417 SRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTI 476
SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTI
Sbjct: 310 SRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTI 369
Query: 477 SERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVS 536
SERR DSSIGFGAPVRANMRAGGVT+A V S+LMETVESSDLIAYGLIPEFVGRFPVLVS
Sbjct: 370 SERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVS 429
Query: 537 LLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGARGLR 596
L ALTENQL+QVLTEPKNALGKQY+KM+QMN VKLHFTE+ALRLIA+KAI+KNTGARGLR
Sbjct: 430 LSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLR 489
Query: 597 SLLENILMDAMYEIPDVRXXXXXXXXXXXXXXXXXSEDR-GCGAKILYGKGALDRYLAQH 655
+LLE+ILMD+MYEIPD E R G GAKIL GKGAL RYL++
Sbjct: 490 ALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALARYLSET 549
Query: 656 KRKDL-ETNVAGADGEPEMETEIPSIVASM 684
KD +T G+DGE E+E EIPS+VASM
Sbjct: 550 NSKDSPQTTKEGSDGETEVEAEIPSVVASM 579
>TAIR|locus:2006942 [details] [associations]
symbol:AT1G33360 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006457 "protein folding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006457 GO:GO:0006508
GO:GO:0017111 GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:BT015363
EMBL:BT015893 IPI:IPI00536875 RefSeq:NP_564423.3 UniGene:At.39953
ProteinModelPortal:Q66GN9 SMR:Q66GN9 STRING:Q66GN9 PaxDb:Q66GN9
PRIDE:Q66GN9 EnsemblPlants:AT1G33360.1 GeneID:840230
KEGG:ath:AT1G33360 TAIR:At1g33360 InParanoid:Q66GN9 OMA:KEICKWL
PhylomeDB:Q66GN9 ProtClustDB:CLSN2690007 Genevestigator:Q66GN9
Uniprot:Q66GN9
Length = 656
Score = 1532 (544.3 bits), Expect = 3.3e-157, P = 3.3e-157
Identities = 316/468 (67%), Positives = 358/468 (76%)
Query: 200 KLXXXXXXXXXXYG-DPPEVWQPPGDGIAVRVNGQGPNLVRXXXXXXXXXXX-XKDGC-- 255
KL YG +PPE W PP + N PN + D
Sbjct: 179 KLRSSFWDTLRSYGAEPPEDWSPPPPHSPL--NSSPPNTIPVNASPSAVDTSPLPDAVND 236
Query: 256 ---WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGE 312
WGG+ LG FPTPKEICK LDKFVIGQ RAKKVLSVAVYNHY RIY+ S +K SA +
Sbjct: 237 VSRWGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQ 296
Query: 313 SSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYV 372
DDD VEL+KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYV
Sbjct: 297 PID------DDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYV 350
Query: 373 GEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 432
G+DVESIL+KLLTV+++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK+
Sbjct: 351 GDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKL 410
Query: 433 LEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR 492
LEGT+VNVP KGARKHPRGD+IQIDTKDILFICGGAFVD+EKTI +RRQDSSIGFGAPVR
Sbjct: 411 LEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVR 470
Query: 493 ANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEP 552
ANM GVT +TSSL+E+VES+DL AYGLIPEFVGRFP+LVSL ALTE+QL++VL EP
Sbjct: 471 ANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEP 530
Query: 553 KNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPD 612
KNALGKQY+K+F MN VKLHFTE AL +I+K+A+ KNTGARGLR+LLE+IL +AM+EIPD
Sbjct: 531 KNALGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILTEAMFEIPD 590
Query: 613 VRXXXXXXXXXXXXXXXXXSE-DRGCGAKILYGKGALDRYLAQHKRKD 659
+ SE RGC AKIL G GA +RYL+++K KD
Sbjct: 591 DKKGDERIDAVIVDEESTSSEASRGCTAKILRGDGAFERYLSENKSKD 638
>TAIR|locus:2155446 [details] [associations]
symbol:AT5G49840 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0006457 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 IPI:IPI00522644
RefSeq:NP_568714.4 UniGene:At.49150 ProteinModelPortal:F4K7F6
SMR:F4K7F6 PRIDE:F4K7F6 EnsemblPlants:AT5G49840.1 GeneID:835047
KEGG:ath:AT5G49840 OMA:ASESYNI Uniprot:F4K7F6
Length = 608
Score = 1310 (466.2 bits), Expect = 5.2e-136, Sum P(2) = 5.2e-136
Identities = 267/404 (66%), Positives = 320/404 (79%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTPKEIC+GLD+FVIGQE+AKKVLSVAVYNHY RIY+ S +K SA ES + + +
Sbjct: 196 KLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNI 255
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESILYKL
Sbjct: 256 DHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKL 315
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP-- 441
+ NV AQ+GIVYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGTVV+VP
Sbjct: 316 YVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIP 375
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
EKG R+ PRGD+IQ+DTKDILFICGGAF+D+EKT+SER+ D+SIGFGA VR NM G++
Sbjct: 376 EKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLS 435
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
A VTSSL+E+++S DL+AYGLIPEFVGR P+LVSL AL E+QLVQVLTEPK+ALGKQY+
Sbjct: 436 SAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYK 495
Query: 562 KMFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPD-VRXXXXXX 620
K+F+MN V+L FTE A RLIA+KA+SKNTGARGLRS+LE+IL +AM+E+PD +
Sbjct: 496 KLFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSI 555
Query: 621 XXXXXXXXXXXSEDR-GCGAKILYGKGALDRYL--AQHKRKDLE 661
S GCGAKIL G L +++ A+ K K E
Sbjct: 556 KAVLVDEEAVGSVGSPGCGAKILKGDNVLQQFVEEAESKEKSKE 599
Score = 43 (20.2 bits), Expect = 5.2e-136, Sum P(2) = 5.2e-136
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 168 TPYHFTSFRPVSLRGELVEKGSQLCTDN 195
T ++F F+ L+G +E G TD+
Sbjct: 120 TAFYFRPFKLSPLQGSFIELGKVKGTDD 147
>TIGR_CMR|SO_1795 [details] [associations]
symbol:SO_1795 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:211586 "Shewanella oneidensis MR-1"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_717404.1
ProteinModelPortal:Q8EG18 SMR:Q8EG18 PRIDE:Q8EG18 GeneID:1169568
KEGG:son:SO_1795 PATRIC:23523213 OMA:MEMRESA Uniprot:Q8EG18
Length = 426
Score = 894 (319.8 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 178/291 (61%), Positives = 224/291 (76%)
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVTD 502
G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEKD 280
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNAL KQY
Sbjct: 281 KATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNA 340
Query: 563 MFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPDV 613
+F+M GV+L F E+AL+ IA KA+S+ TGARGLRS++E IL+D MY+IP +
Sbjct: 341 LFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSI 391
Score = 143 (55.4 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNES 304
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS 104
>TIGR_CMR|CBU_0739 [details] [associations]
symbol:CBU_0739 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:227377 "Coxiella burnetii RSA 493"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
RefSeq:NP_819765.1 ProteinModelPortal:Q83DJ1 SMR:Q83DJ1
PRIDE:Q83DJ1 GeneID:1208630 KEGG:cbu:CBU_0739 PATRIC:17930169
BioCyc:CBUR227377:GJ7S-736-MONOMER Uniprot:Q83DJ1
Length = 422
Score = 872 (312.0 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 170/290 (58%), Positives = 226/290 (77%)
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D+VE+ KSNILL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 102 DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDVENIIQKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +Y+V A+ GI+YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGTV ++P +
Sbjct: 162 LQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGTVASIPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF D+ K I R S IGF A VR + +A
Sbjct: 222 GGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRP--KEDFSREA 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L++ E DLI YGLIPEFVGR P++ +L L E+ L+++LTEPKNAL KQYRK+
Sbjct: 280 ---SKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKL 336
Query: 564 FQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPDV 613
F+ GV++ F E+AL+ IAK+AI + TGARGLRS++E+ L+D MY++P V
Sbjct: 337 FEFEGVEIDFREDALKAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPGV 386
Score = 145 (56.1 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
GG+ K PTP EI + LD++VIGQE AKKVLSVAVYNHY R+ N++ +K S S S
Sbjct: 54 GGAQ--KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQT-KKDSVEISKS 109
>TIGR_CMR|CHY_0326 [details] [associations]
symbol:CHY_0326 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0051082 "unfolded
protein binding" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_359189.1
ProteinModelPortal:Q3AF95 SMR:Q3AF95 STRING:Q3AF95 GeneID:3726618
KEGG:chy:CHY_0326 PATRIC:21273823
BioCyc:CHYD246194:GJCN-327-MONOMER Uniprot:Q3AF95
Length = 418
Score = 880 (314.8 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 174/288 (60%), Positives = 228/288 (79%)
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNIL++GPTGSGKTLLA+TLAR++NVPF IADAT LT+AGYVGEDVE+IL KL
Sbjct: 99 DDVELSKSNILMLGPTGSGKTLLAQTLARFLNVPFAIADATALTEAGYVGEDVENILLKL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct: 159 IQNADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQ 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFI GGAF IEK I R +GFGA ++ R V +
Sbjct: 219 GGRKHPHQEFIQIDTTNILFIVGGAFEGIEKIIQNRIGKKGLGFGAEIKPK-REQNVGE- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++ + DL+ +GLIPEFVGR P++V+L AL E+ LV++LTEPKNAL KQY+K+
Sbjct: 277 -----ILKHIMPEDLLKFGLIPEFVGRLPIIVTLDALDEDALVRILTEPKNALIKQYQKL 331
Query: 564 FQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
F+++GV L F E+ALR IA+KAI +NTGARGLR++LE +++D MYEIP
Sbjct: 332 FELDGVTLEFEEDALRAIAQKAIKRNTGARGLRAILEEVMLDVMYEIP 379
Score = 126 (49.4 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI 300
+ P P+EI LD++VIGQE AKKVL+VAVYNHY RI
Sbjct: 56 ELPKPQEIKAYLDQYVIGQEEAKKVLAVAVYNHYKRI 92
>UNIPROTKB|P0A6H1 [details] [associations]
symbol:clpX "ClpX" species:83333 "Escherichia coli K-12"
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;IDA] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0006950 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0008270 EMBL:U82664 GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 EMBL:L18867 EMBL:Z23278 PIR:A48709
RefSeq:NP_414972.1 RefSeq:YP_488730.1 PDB:1OVX PDB:2DS5 PDB:2DS6
PDB:2DS7 PDB:2DS8 PDB:3HTE PDB:3HWS PDBsum:1OVX PDBsum:2DS5
PDBsum:2DS6 PDBsum:2DS7 PDBsum:2DS8 PDBsum:3HTE PDBsum:3HWS
ProteinModelPortal:P0A6H1 SMR:P0A6H1 DIP:DIP-35907N IntAct:P0A6H1
PaxDb:P0A6H1 PRIDE:P0A6H1 EnsemblBacteria:EBESCT00000004587
EnsemblBacteria:EBESCT00000004721 EnsemblBacteria:EBESCT00000004722
EnsemblBacteria:EBESCT00000015548 GeneID:12931741 GeneID:945083
KEGG:ecj:Y75_p0426 KEGG:eco:b0438 PATRIC:32116029 EchoBASE:EB0157
EcoGene:EG10159 BioCyc:EcoCyc:EG10159-MONOMER
BioCyc:ECOL316407:JW0428-MONOMER BioCyc:MetaCyc:EG10159-MONOMER
EvolutionaryTrace:P0A6H1 Genevestigator:P0A6H1 Uniprot:P0A6H1
Length = 424
Score = 859 (307.4 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 172/296 (58%), Positives = 225/296 (76%)
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
+G + VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+
Sbjct: 101 NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN 160
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 161 IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 220
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS-IGFGAPVRANMRA 497
VP +G RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A
Sbjct: 221 AVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK--- 277
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
+D L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL
Sbjct: 278 ---SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT 334
Query: 558 KQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPDV 613
KQY+ +F + GV L F + AL IAKKA+++ TGARGLRS++E L+D MY++P +
Sbjct: 335 KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSM 390
Score = 136 (52.9 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN-ESSQKRSAGESS 314
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N ++S G+S+
Sbjct: 65 PTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSN 114
>UNIPROTKB|P0CAU2 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:190650 "Caulobacter crescentus CB15" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AE005673 PIR:D87492
RefSeq:NP_420768.1 ProteinModelPortal:P0CAU2 SMR:P0CAU2
IntAct:P0CAU2 PRIDE:P0CAU2 GeneID:942736 GenomeReviews:AE005673_GR
KEGG:ccr:CC_1961 PATRIC:21300930 Uniprot:P0CAU2
Length = 420
Score = 860 (307.8 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 170/289 (58%), Positives = 225/289 (77%)
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
++ VEL KSNILL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 104 NNDVELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLK 163
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 164 LLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF +EK IS R SIGFGA V +
Sbjct: 224 QGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAKVTD-------PE 276
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T ++ VE DL +GLIPEF+GR PV+ +L L E LV++LTEPKNA KQY++
Sbjct: 277 ERRTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQR 336
Query: 563 MFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
+F+M + L FTE+AL +AKKAI++ TGARGLRS++E IL++ M+E+P
Sbjct: 337 LFEMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELP 385
Score = 133 (51.9 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQ 306
PTP+EIC+ LD +VIGQ AKKVL+VAV+NHY R+ N +S+
Sbjct: 64 PTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRL-NHASK 103
>TIGR_CMR|SPO_1004 [details] [associations]
symbol:SPO_1004 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_166256.1
HSSP:P0A6H1 ProteinModelPortal:Q5LUP9 SMR:Q5LUP9 GeneID:3195507
KEGG:sil:SPO1004 PATRIC:23375301 OMA:YVIGQQQ Uniprot:Q5LUP9
Length = 424
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 198/348 (56%), Positives = 265/348 (76%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++IC LD +VIGQ AK+VLSVAV+NHY R+ + +QK AG
Sbjct: 66 PTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNH--AQK--AGSD------------ 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VRA+ G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERG------- 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 283 VGELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFE 342
Query: 566 MNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPDV 613
+ +L FT++AL+ IAK+AI + TGARGLRS++E+IL+D M+++P +
Sbjct: 343 LEDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDLPSM 390
>TIGR_CMR|CPS_3784 [details] [associations]
symbol:CPS_3784 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:167879 "Colwellia psychrerythraea 34H"
[GO:0005524 "ATP binding" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0008270 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_270451.1
HSSP:P0A6H5 ProteinModelPortal:Q47XL9 SMR:Q47XL9 STRING:Q47XL9
PRIDE:Q47XL9 GeneID:3521714 KEGG:cps:CPS_3784 PATRIC:21470481
BioCyc:CPSY167879:GI48-3806-MONOMER Uniprot:Q47XL9
Length = 424
Score = 853 (305.3 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 168/296 (56%), Positives = 224/296 (75%)
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
+G + + +EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+
Sbjct: 102 NGDNHNGIELGKSNILLIGPTGSGKTLLAQTLARLLDVPFTMADATTLTEAGYVGEDVEN 161
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 162 IIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS-IGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT ILFICGGAF ++K + +R + IGFGA VR +
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVEQRNHTGTGIGFGAEVRGKDQE 281
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
+TD + VE DL+ YGLIPEF+GR PVL +L L E L+Q+L EPKNAL
Sbjct: 282 ISLTDRLAD------VEPQDLVKYGLIPEFIGRLPVLATLRELDEAALIQILQEPKNALT 335
Query: 558 KQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPDV 613
KQ+ +F M V+L F +AL IA+KA+ + TGARGLRS++E +L+D MYE+P +
Sbjct: 336 KQFTALFDMENVELEFRSDALHAIARKAMDRKTGARGLRSIVEAVLLDTMYELPSM 391
Score = 127 (49.8 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P+P EI + LD++VIGQ+ AKKVL+VAVYNHY R+ N
Sbjct: 66 PSPIEIRESLDEYVIGQDHAKKVLAVAVYNHYKRLRN 102
>UNIPROTKB|Q9KQS7 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 198/349 (56%), Positives = 259/349 (74%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N G++ T++GV
Sbjct: 66 PTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDT---TSEGV---- 110
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 -ELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ ++
Sbjct: 230 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK------DNSK 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +F
Sbjct: 284 TLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALF 343
Query: 565 QMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPDV 613
++ V L F E+AL+ IA KA+ + TGARGLRS+LE +L++ MYE+P +
Sbjct: 344 ELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSM 392
>TIGR_CMR|VC_1921 [details] [associations]
symbol:VC_1921 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 198/349 (56%), Positives = 259/349 (74%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N G++ T++GV
Sbjct: 66 PTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDT---TSEGV---- 110
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 -ELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ ++
Sbjct: 230 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK------DNSK 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +F
Sbjct: 284 TLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALF 343
Query: 565 QMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPDV 613
++ V L F E+AL+ IA KA+ + TGARGLRS+LE +L++ MYE+P +
Sbjct: 344 ELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSM 392
>TIGR_CMR|GSU_1791 [details] [associations]
symbol:GSU_1791 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:243231 "Geobacter sulfurreducens PCA"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 OMA:IMFEVPS RefSeq:NP_952841.1
ProteinModelPortal:Q74C83 SMR:Q74C83 PRIDE:Q74C83 GeneID:2686411
KEGG:gsu:GSU1791 PATRIC:22026429
BioCyc:GSUL243231:GH27-1811-MONOMER Uniprot:Q74C83
Length = 417
Score = 838 (300.0 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 165/288 (57%), Positives = 220/288 (76%)
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE++KSNILL+GPTGSGKTLLA+TLAR + VPF +ADAT LT+AGYVGEDVE+I+ LL
Sbjct: 107 VEMQKSNILLLGPTGSGKTLLAQTLARILKVPFAMADATNLTEAGYVGEDVENIILNLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V AQ+GI+YIDE+DKI +K++S +I+RDVSGEGVQQALLK++EGTV +VP KG
Sbjct: 167 AADYDVERAQKGIIYIDEIDKIARKSDSPSITRDVSGEGVQQALLKIIEGTVASVPPKGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM--RAGGVTDA 503
RKHP+ + +++DT +ILFICGGAF ++ I +R +GFGA V++ + RAG
Sbjct: 227 RKHPQQEFLKVDTTNILFICGGAFAGLDSIIQQRIGVKKLGFGADVKSKVEKRAG----- 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ V DL+ +G IPEF+GR PVL +L L E +VQ+L EPKNAL KQY+K+
Sbjct: 282 ----ELLTEVTPEDLLKFGFIPEFIGRLPVLATLRELDETAMVQILKEPKNALIKQYQKL 337
Query: 564 FQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
F+M VKL FT+ +L I+++A+ + TGARGLRS+LEN ++D MYEIP
Sbjct: 338 FEMEHVKLKFTDGSLVAISREALKRKTGARGLRSILENAMLDIMYEIP 385
Score = 131 (51.2 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRS 309
K P P+EI LD++VIGQ++AKKVL+VAVYNHY RI ES K S
Sbjct: 62 KLPKPREIKDVLDEYVIGQDQAKKVLAVAVYNHYKRI--ESMGKPS 105
>TIGR_CMR|APH_0969 [details] [associations]
symbol:APH_0969 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
RefSeq:YP_505536.1 ProteinModelPortal:Q2GJB5 SMR:Q2GJB5
STRING:Q2GJB5 PRIDE:Q2GJB5 GeneID:3930607 KEGG:aph:APH_0969
PATRIC:20950654 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 BioCyc:APHA212042:GHPM-981-MONOMER
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 Uniprot:Q2GJB5
Length = 415
Score = 827 (296.2 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 164/284 (57%), Positives = 221/284 (77%)
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSN+LL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+IL KLL
Sbjct: 101 VEISKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQ 160
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+++NV AAQ+GI+YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 161 AANFNVEAAQRGIIYIDEVDKISRKSENASITRDVSGEGVQQALLKVIEGTVSSVPPQGG 220
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + IQI T +ILFI GGAF +EK I R + SS+GF A V++ +
Sbjct: 221 RKHPHQEFIQISTDNILFIFGGAFDGLEKIIEARNRGSSMGFEANVQSMVSP-------- 272
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ E DL+ +GLIPEF+GR PV+ SL L EN L +VL EPKN+L KQY K+F+
Sbjct: 273 TKDVLSYAEPEDLVKFGLIPEFIGRIPVITSLGKLDENTLFRVLVEPKNSLVKQYAKLFE 332
Query: 566 MNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYE 609
M+ ++L F ++AL IA+KA+ +NTGARGLR+++E++L+D M++
Sbjct: 333 MDNLELKFDDDALMAIARKAVDRNTGARGLRAIMESLLLDFMFD 376
Score = 124 (48.7 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P+EI + LD++VIGQE +KKVLSVAVYNHY R+ N
Sbjct: 60 PREIKEVLDEYVIGQEHSKKVLSVAVYNHYKRLRN 94
>TIGR_CMR|ECH_0900 [details] [associations]
symbol:ECH_0900 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0008270 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_507694.1 ProteinModelPortal:Q2GFT9
SMR:Q2GFT9 STRING:Q2GFT9 PRIDE:Q2GFT9 GeneID:3927295
KEGG:ech:ECH_0900 PATRIC:20577200
BioCyc:ECHA205920:GJNR-903-MONOMER Uniprot:Q2GFT9
Length = 406
Score = 813 (291.2 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 164/286 (57%), Positives = 218/286 (76%)
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSN+LL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+IL KLL
Sbjct: 102 VEISKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQ 161
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+++NV AAQ+GI+YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 162 AANFNVDAAQRGIIYIDEVDKISRKSENTSITRDVSGEGVQQALLKVIEGTVSSVPPQGG 221
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + IQI+T +ILFI GGAF ++K I R + SS+GF A V+ +
Sbjct: 222 RKHPHQEFIQINTDNILFIFGGAFDGLDKIIESRHRGSSMGFEANVQKVSK--------- 272
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ E DL+ +GLIPEFVGR PV+ SL L E+ L ++L EPKN+L KQY+K+F+
Sbjct: 273 NKDIFCYTEPEDLVKFGLIPEFVGRIPVITSLGELDESTLCRILVEPKNSLVKQYKKLFE 332
Query: 566 MNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
M+ + L F ++AL +IAKKA + TGARGLR++LE +L+D M+E P
Sbjct: 333 MDNINLQFDDSALSVIAKKAAVRKTGARGLRAILEALLLDLMFESP 378
Score = 132 (51.5 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNES 304
PKEI K LD++VIGQE +KKVLSVAVYNHY R+ N S
Sbjct: 61 PKEIKKVLDEYVIGQEHSKKVLSVAVYNHYKRLSNLS 97
>TIGR_CMR|BA_4704 [details] [associations]
symbol:BA_4704 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_846917.1
RefSeq:YP_021352.1 RefSeq:YP_030616.1 ProteinModelPortal:Q81LB9
SMR:Q81LB9 PRIDE:Q81LB9 DNASU:1083685
EnsemblBacteria:EBBACT00000013271 EnsemblBacteria:EBBACT00000014313
EnsemblBacteria:EBBACT00000019954 GeneID:1083685 GeneID:2816065
GeneID:2851842 KEGG:ban:BA_4704 KEGG:bar:GBAA_4704 KEGG:bat:BAS4369
OMA:IMFEVPS BioCyc:BANT260799:GJAJ-4424-MONOMER
BioCyc:BANT261594:GJ7F-4572-MONOMER Uniprot:Q81LB9
Length = 419
Score = 823 (294.8 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
Identities = 166/288 (57%), Positives = 220/288 (76%)
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNI L+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 103 DDVELAKSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 162
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY+V A++GI+YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +
Sbjct: 163 IQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQ 222
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFICGGAF IE I R + IGFG+ + N V +
Sbjct: 223 GGRKHPHQEFIQIDTTNILFICGGAFDGIEPIIKRRLGEKVIGFGSE-KKN---ADVNEK 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V S ++ DL+ +GLIPEF+GR PV+ +L L E+ LV +LT+PKNAL KQ++K+
Sbjct: 279 HVLSHVLP----EDLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKL 334
Query: 564 FQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
+++ V+L F E AL IAKKAI + TGARGLRS++E ++++ M+E+P
Sbjct: 335 LELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELP 382
Score = 119 (46.9 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNES 304
P P EI + LD++VIGQ+ AKK L+VAVYNHY RI + S
Sbjct: 62 PKPVEIREILDEYVIGQDNAKKALAVAVYNHYKRINSNS 100
>UNIPROTKB|P0A528 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
GO:GO:0006457 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270 EMBL:BX842579
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:IMFEVPS PIR:H70864
RefSeq:NP_216973.1 RefSeq:NP_337018.1 RefSeq:YP_006515894.1
ProteinModelPortal:P0A528 SMR:P0A528 PRIDE:P0A528
EnsemblBacteria:EBMYCT00000001091 EnsemblBacteria:EBMYCT00000069736
GeneID:13319167 GeneID:888167 GeneID:925794 KEGG:mtc:MT2532
KEGG:mtu:Rv2457c KEGG:mtv:RVBD_2457c PATRIC:18127322
TubercuList:Rv2457c Uniprot:P0A528
Length = 426
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 188/349 (53%), Positives = 251/349 (71%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P EI + L+ +VIGQ+ AK+ L+VAVYNHY RI ++ +K G S C
Sbjct: 59 DELPKPAEIREFLEGYVIGQDTAKRTLAVAVYNHYKRI--QAGEK---GRDSRC------ 107
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNIL++GPTG GKT LA+TLA+ +NVPF IADAT LT+AGYVGEDVE+IL K
Sbjct: 108 -EPVELTKSNILMLGPTGCGKTYLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
L+ +DY+V A+ GI+YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP
Sbjct: 167 LIQAADYDVKRAETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTQASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQIDT ++LFI GAF +EK I ER +GFGA VR+
Sbjct: 227 QGGRKHPHQEFIQIDTTNVLFIVAGAFAGLEKIIYERVGKRGLGFGAEVRSKAE------ 280
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ T+ V DLI +GLIPEF+GR PV+ S+ L + LV++L+EPKNAL KQY +
Sbjct: 281 -IDTTDHFADVMPEDLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYIR 339
Query: 563 MFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
+F+M+GV+L FT++AL IA +AI + TGARGLR+++E +L+ MY+IP
Sbjct: 340 LFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
>MGI|MGI:1346017 [details] [associations]
symbol:Clpx "caseinolytic peptidase X (E.coli)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=ISO]
[GO:0016504 "peptidase activator activity" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=ISO] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
MGI:MGI:1346017 GO:GO:0005524 GO:GO:0005634 GO:GO:0006457
GO:GO:0005743 GO:GO:0046872 GO:GO:0016504 GO:GO:0016887
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
EMBL:AJ276991 EMBL:AF134983 EMBL:AC110235 IPI:IPI00119808
RefSeq:NP_035932.2 UniGene:Mm.30088 ProteinModelPortal:Q9JHS4
SMR:Q9JHS4 STRING:Q9JHS4 PhosphoSite:Q9JHS4 PaxDb:Q9JHS4
PRIDE:Q9JHS4 Ensembl:ENSMUST00000015501 GeneID:270166
KEGG:mmu:270166 UCSC:uc009qdb.1 GeneTree:ENSGT00390000017625
InParanoid:Q9JHS4 ChiTaRS:CLPX NextBio:393279 Bgee:Q9JHS4
CleanEx:MM_CLPX Genevestigator:Q9JHS4 GermOnline:ENSMUSG00000015357
Uniprot:Q9JHS4
Length = 634
Score = 783 (280.7 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 164/329 (49%), Positives = 228/329 (69%)
Query: 299 RIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPF 358
++ + Q++ GE D DD ++LEKSNILL+GPTGSGKTLLA+TLA+ ++VPF
Sbjct: 261 QVNQQMPQEKRGGE----VLDSSQDD-IKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPF 315
Query: 359 VIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISR 418
I D TTLTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ R
Sbjct: 316 AICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLR 374
Query: 419 DVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISE 478
DV GEGVQQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT ++LF+ GAF +++ IS
Sbjct: 375 DVGGEGVQQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNVLFVASGAFNGLDRIISR 433
Query: 479 RRQDSSIGFGAP--VRANMRAGGVTDAVVTSS-------------LMETVESSDLIAYGL 523
R+ + +GFG P + RA D S L+ VE+ DLI +G+
Sbjct: 434 RKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGM 493
Query: 524 IPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAK 583
IPEFVGR PV+V L +L E LVQ+LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+
Sbjct: 494 IPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIAR 553
Query: 584 KAISKNTGARGLRSLLENILMDAMYEIPD 612
A+ + TGARGLRS++E +L++ M+E+P+
Sbjct: 554 LALERKTGARGLRSIMEKLLLEPMFEVPN 582
Score = 140 (54.3 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 30/54 (55%), Positives = 36/54 (66%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNE-SSQKRSAGESSSCTT 318
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN + R E+ T+
Sbjct: 168 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEAEKQTS 221
>UNIPROTKB|E2QSS3 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AAEX03016215
RefSeq:XP_852508.1 Ensembl:ENSCAFT00000027135 GeneID:609344
KEGG:cfa:609344 NextBio:20894946 Uniprot:E2QSS3
Length = 633
Score = 783 (280.7 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 165/329 (50%), Positives = 228/329 (69%)
Query: 299 RIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPF 358
++ + Q++ GE D DD ++LEKSNILL+GPTGSGKTLLA+TLA+ ++VPF
Sbjct: 260 QVNQQMPQEKRGGE----VLDSSHDD-IKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPF 314
Query: 359 VIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISR 418
I D TTLTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ R
Sbjct: 315 AICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLR 373
Query: 419 DVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISE 478
DV GEGVQQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT +ILF+ GAF +++ IS
Sbjct: 374 DVGGEGVQQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISR 432
Query: 479 RRQDSSIGFGAP--VRANMRAGGVTDAVVTSS-------------LMETVESSDLIAYGL 523
R+ + +GFG P + RA D S L+ VE+ DLI +G+
Sbjct: 433 RKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGM 492
Query: 524 IPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAK 583
IPEFVGR PV+V L +L E LVQ+LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+
Sbjct: 493 IPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIAR 552
Query: 584 KAISKNTGARGLRSLLENILMDAMYEIPD 612
A+ + TGARGLRS++E +L++ M+E+P+
Sbjct: 553 LALERKTGARGLRSIMEKLLLEPMFEVPN 581
Score = 138 (53.6 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYN 203
>UNIPROTKB|F1N155 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:DAAA02027858
EMBL:DAAA02027859 EMBL:DAAA02027860 IPI:IPI00696713
Ensembl:ENSBTAT00000011038 Uniprot:F1N155
Length = 607
Score = 782 (280.3 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 165/329 (50%), Positives = 228/329 (69%)
Query: 299 RIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPF 358
++ + Q++ GE D DD ++LEKSNILL+GPTGSGKTLLA+TLA+ ++VPF
Sbjct: 234 QVNQQIPQEKRGGE----VLDSSHDD-IKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPF 288
Query: 359 VIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISR 418
I D TTLTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ R
Sbjct: 289 AICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLR 347
Query: 419 DVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISE 478
DV GEGVQQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT +ILF+ GAF +++ IS
Sbjct: 348 DVGGEGVQQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISR 406
Query: 479 RRQDSSIGFGAP--VRANMRAGGVTDAVVTSS-------------LMETVESSDLIAYGL 523
R+ + +GFG P + RA D S L+ VE+ DLI +G+
Sbjct: 407 RKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGM 466
Query: 524 IPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAK 583
IPEFVGR PV+V L +L E LVQ+LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+
Sbjct: 467 IPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIAR 526
Query: 584 KAISKNTGARGLRSLLENILMDAMYEIPD 612
A+ + TGARGLRS++E +L++ M+E+P+
Sbjct: 527 LALERKTGARGLRSIMEKLLLEPMFEVPN 555
Score = 138 (53.6 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 141 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYN 177
>UNIPROTKB|O76031 [details] [associations]
symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IDA] [GO:0016504 "peptidase activator activity"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=NAS;IDA]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IDA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0010952 "positive regulation of peptidase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0016887 GO:GO:0042645
EMBL:CH471082 GO:GO:0051603 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AJ006267
EMBL:AJ276980 EMBL:AJ276981 EMBL:AJ276966 EMBL:AJ276967
EMBL:AJ276968 EMBL:AJ276969 EMBL:AJ276970 EMBL:AJ276971
EMBL:AJ276972 EMBL:AJ276973 EMBL:AJ276974 EMBL:AJ276975
EMBL:AJ276976 EMBL:AJ276977 EMBL:AK292316 EMBL:BC130373
EMBL:BC136487 IPI:IPI00008728 RefSeq:NP_006651.2 UniGene:Hs.113823
ProteinModelPortal:O76031 SMR:O76031 IntAct:O76031
MINT:MINT-3002168 STRING:O76031 PhosphoSite:O76031 PaxDb:O76031
PeptideAtlas:O76031 PRIDE:O76031 Ensembl:ENST00000300107
GeneID:10845 KEGG:hsa:10845 UCSC:uc002aom.3 CTD:10845
GeneCards:GC15M065440 HGNC:HGNC:2088 HPA:HPA040262
neXtProt:NX_O76031 PharmGKB:PA26614 HOVERGEN:HBG004940
InParanoid:O76031 OMA:KSIIKEP OrthoDB:EOG46DM2G PhylomeDB:O76031
GenomeRNAi:10845 NextBio:41174 ArrayExpress:O76031 Bgee:O76031
CleanEx:HS_CLPX Genevestigator:O76031 GermOnline:ENSG00000166855
GO:GO:0009841 Uniprot:O76031
Length = 633
Score = 782 (280.3 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 165/329 (50%), Positives = 228/329 (69%)
Query: 299 RIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPF 358
++ + Q++ GE D DD ++LEKSNILL+GPTGSGKTLLA+TLA+ ++VPF
Sbjct: 260 QVNQQIPQEKRGGE----VLDSSHDD-IKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPF 314
Query: 359 VIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISR 418
I D TTLTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ R
Sbjct: 315 AICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLR 373
Query: 419 DVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISE 478
DV GEGVQQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT +ILF+ GAF +++ IS
Sbjct: 374 DVGGEGVQQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISR 432
Query: 479 RRQDSSIGFGAP--VRANMRAGGVTDAVVTSS-------------LMETVESSDLIAYGL 523
R+ + +GFG P + RA D S L+ VE+ DLI +G+
Sbjct: 433 RKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGM 492
Query: 524 IPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAK 583
IPEFVGR PV+V L +L E LVQ+LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+
Sbjct: 493 IPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIAR 552
Query: 584 KAISKNTGARGLRSLLENILMDAMYEIPD 612
A+ + TGARGLRS++E +L++ M+E+P+
Sbjct: 553 LALERKTGARGLRSIMEKLLLEPMFEVPN 581
Score = 138 (53.6 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYN 203
>UNIPROTKB|F1SJL5 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:CU856492
Ensembl:ENSSSCT00000005437 Uniprot:F1SJL5
Length = 619
Score = 782 (280.3 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 165/329 (50%), Positives = 228/329 (69%)
Query: 299 RIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPF 358
++ + Q++ GE D DD ++LEKSNILL+GPTGSGKTLLA+TLA+ ++VPF
Sbjct: 246 QVNQQIPQEKRGGE----VLDSSHDD-IKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPF 300
Query: 359 VIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISR 418
I D TTLTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ R
Sbjct: 301 AICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLR 359
Query: 419 DVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISE 478
DV GEGVQQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT +ILF+ GAF +++ IS
Sbjct: 360 DVGGEGVQQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISR 418
Query: 479 RRQDSSIGFGAP--VRANMRAGGVTDAVVTSS-------------LMETVESSDLIAYGL 523
R+ + +GFG P + RA D S L+ VE+ DLI +G+
Sbjct: 419 RKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGM 478
Query: 524 IPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAK 583
IPEFVGR PV+V L +L E LVQ+LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+
Sbjct: 479 IPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIAR 538
Query: 584 KAISKNTGARGLRSLLENILMDAMYEIPD 612
A+ + TGARGLRS++E +L++ M+E+P+
Sbjct: 539 LALERKTGARGLRSIMEKLLLEPMFEVPN 567
Score = 138 (53.6 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYN 203
>RGD|1304883 [details] [associations]
symbol:Clpx "ClpX caseinolytic peptidase X homolog (E. coli)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006457
"protein folding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA;ISO] [GO:0010952 "positive regulation of peptidase
activity" evidence=ISO] [GO:0016504 "peptidase activator activity"
evidence=IEA;ISO] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 RGD:1304883
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0042645 GO:GO:0051603
GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 CTD:10845 HOVERGEN:HBG004940 OMA:KSIIKEP
OrthoDB:EOG46DM2G GO:GO:0009841 GeneTree:ENSGT00390000017625
EMBL:BC085867 IPI:IPI00196478 RefSeq:NP_001007804.1
UniGene:Rn.203913 HSSP:O25926 ProteinModelPortal:Q5U2U0 SMR:Q5U2U0
STRING:Q5U2U0 PhosphoSite:Q5U2U0 PRIDE:Q5U2U0
Ensembl:ENSRNOT00000048302 GeneID:300786 KEGG:rno:300786
UCSC:RGD:1304883 InParanoid:Q5U2U0 NextBio:647505
ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0 Uniprot:Q5U2U0
Length = 633
Score = 781 (280.0 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 165/322 (51%), Positives = 225/322 (69%)
Query: 306 QKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATT 365
Q++ GE D DD ++LEKSNILL+GPTGSGKTLLA+TLA+ ++VPF I D TT
Sbjct: 267 QEKRGGE----VLDSPHDD-IKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTT 321
Query: 366 LTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGV 425
LTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ RDV GEGV
Sbjct: 322 LTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGV 380
Query: 426 QQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSI 485
QQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT +ILF+ GAF +++ IS R+ + +
Sbjct: 381 QQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYL 439
Query: 486 GFGAP--VRANMRAGGVTDAVVTSS-------------LMETVESSDLIAYGLIPEFVGR 530
GFG P + RA D S L+ VE+ DLI +G+IPEFVGR
Sbjct: 440 GFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGR 499
Query: 531 FPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNT 590
PV+V L +L E LVQ+LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+ A+ + T
Sbjct: 500 LPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKT 559
Query: 591 GARGLRSLLENILMDAMYEIPD 612
GARGLRS++E +L++ M+E+P+
Sbjct: 560 GARGLRSIMEKLLLEPMFEVPN 581
Score = 138 (53.6 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYN 203
>UNIPROTKB|Q5U2U0 [details] [associations]
symbol:Clpx "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:10116 "Rattus norvegicus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009841 "mitochondrial endopeptidase Clp complex" evidence=IEA]
[GO:0016504 "peptidase activator activity" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 RGD:1304883 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0046872 GO:GO:0016504
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
GeneTree:ENSGT00390000017625 EMBL:BC085867 IPI:IPI00196478
RefSeq:NP_001007804.1 UniGene:Rn.203913 HSSP:O25926
ProteinModelPortal:Q5U2U0 SMR:Q5U2U0 STRING:Q5U2U0
PhosphoSite:Q5U2U0 PRIDE:Q5U2U0 Ensembl:ENSRNOT00000048302
GeneID:300786 KEGG:rno:300786 UCSC:RGD:1304883 InParanoid:Q5U2U0
NextBio:647505 ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0
Uniprot:Q5U2U0
Length = 633
Score = 781 (280.0 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 165/322 (51%), Positives = 225/322 (69%)
Query: 306 QKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATT 365
Q++ GE D DD ++LEKSNILL+GPTGSGKTLLA+TLA+ ++VPF I D TT
Sbjct: 267 QEKRGGE----VLDSPHDD-IKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTT 321
Query: 366 LTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGV 425
LTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ RDV GEGV
Sbjct: 322 LTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGV 380
Query: 426 QQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSI 485
QQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT +ILF+ GAF +++ IS R+ + +
Sbjct: 381 QQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYL 439
Query: 486 GFGAP--VRANMRAGGVTDAVVTSS-------------LMETVESSDLIAYGLIPEFVGR 530
GFG P + RA D S L+ VE+ DLI +G+IPEFVGR
Sbjct: 440 GFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGR 499
Query: 531 FPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNT 590
PV+V L +L E LVQ+LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+ A+ + T
Sbjct: 500 LPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKT 559
Query: 591 GARGLRSLLENILMDAMYEIPD 612
GARGLRS++E +L++ M+E+P+
Sbjct: 560 GARGLRSIMEKLLLEPMFEVPN 581
Score = 138 (53.6 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYN 203
>UNIPROTKB|F1NA92 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=IEA] [GO:0016504
"peptidase activator activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AADN02038940
IPI:IPI00651275 Ensembl:ENSGALT00000011804 ArrayExpress:F1NA92
Uniprot:F1NA92
Length = 630
Score = 780 (279.6 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 166/324 (51%), Positives = 228/324 (70%)
Query: 306 QKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATT 365
Q++ GE D +DD ++LEKSNILL+GPTGSGKTLLA+TLA+ ++VPF I D TT
Sbjct: 264 QEKRGGE----VLDSPNDD-IKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTT 318
Query: 366 LTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGV 425
LTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ RDV GEGV
Sbjct: 319 LTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGV 377
Query: 426 QQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSI 485
QQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT +ILF+ GAF +++ IS R+ + +
Sbjct: 378 QQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYL 436
Query: 486 GFGAPVRANM----RAGGVTDAVVTSS-------------LMETVESSDLIAYGLIPEFV 528
GFG P +NM RA D S L+ VE+ DLI +G+IPEFV
Sbjct: 437 GFGTP--SNMGKGRRAAAAADLANISGESNTHEDIEEKDRLLRHVEARDLIEFGMIPEFV 494
Query: 529 GRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISK 588
GR PV+V L +L E LV++LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+ A+ +
Sbjct: 495 GRLPVVVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAIARLALER 554
Query: 589 NTGARGLRSLLENILMDAMYEIPD 612
TGARGLRS++E +L++ M+E+P+
Sbjct: 555 KTGARGLRSIMEKLLLEPMFEVPN 578
Score = 134 (52.2 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 164 PPPKKIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYN 200
>TIGR_CMR|CJE_0324 [details] [associations]
symbol:CJE_0324 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:195099 "Campylobacter jejuni RM1221"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111 GO:GO:0008233
InterPro:IPR025943 PROSITE:PS00676 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_178344.1 ProteinModelPortal:Q5HWJ1
SMR:Q5HWJ1 STRING:Q5HWJ1 GeneID:3231086 KEGG:cjr:CJE0324
PATRIC:20042350 BioCyc:CJEJ195099:GJC0-329-MONOMER Uniprot:Q5HWJ1
Length = 407
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 183/348 (52%), Positives = 250/348 (71%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTV 326
TPKE+ LD++VIGQ+RAKKV SV VYNHY R++ Q DDDT
Sbjct: 62 TPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQ---------------DDDT- 105
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
EL KSNILL+GPTGSGKTLLA+TLA++++VP I DAT+LT+AGYVGEDVE+IL +LL
Sbjct: 106 ELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTRLLQA 165
Query: 387 SDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGAR 446
+D +V AQ+GIV+IDE+DKI + +E+ +I+RDVSGEGVQQALLK++EG++VN+P KG R
Sbjct: 166 ADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVNIPPKGGR 225
Query: 447 KHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVT 506
KHP + IQIDT +ILF+CGGAF +E + + D +GF + +A
Sbjct: 226 KHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKA--------- 276
Query: 507 SSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQM 566
L+E +E DL+ +GLIPE +GR V+ SL L E +V++LTEPKNA+ KQY+K+F +
Sbjct: 277 --LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAI 334
Query: 567 NGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIPDVR 614
+GV L F E+ALR IA+ A+ + TGARGLRS++E +++D M+E+P+ +
Sbjct: 335 DGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYK 382
>ZFIN|ZDB-GENE-040912-143 [details] [associations]
symbol:clpx "ClpX caseinolytic peptidase X homolog
(E. coli)" species:7955 "Danio rerio" [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
ZFIN:ZDB-GENE-040912-143 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845
HOVERGEN:HBG004940 OrthoDB:EOG46DM2G EMBL:BC081643 IPI:IPI00494396
RefSeq:NP_001004581.1 UniGene:Dr.4306 ProteinModelPortal:Q66HW5
STRING:Q66HW5 GeneID:447842 KEGG:dre:447842 NextBio:20832363
ArrayExpress:Q66HW5 Bgee:Q66HW5 Uniprot:Q66HW5
Length = 610
Score = 768 (275.4 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 162/309 (52%), Positives = 219/309 (70%)
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
D D ++LEKSNI+L+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGYVGED+ES
Sbjct: 252 DSTHTD-IKLEKSNIVLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIES 310
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
++ KLL ++Y + AQQGIV++DEVDKI ++ RDV GEGVQQ LLK+LEGT+V
Sbjct: 311 VIAKLLQDANYVIEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLKLLEGTIV 369
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV------R 492
NVPEK RK RG+ +Q+DT +ILF+ GAF +++ IS R+ + +GFG P R
Sbjct: 370 NVPEKNTRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPSNMGKGRR 428
Query: 493 ANMRA------GGVTDAVVT----SSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTE 542
A A GG DAV L++ VE+ DLI +G+IPEFVGR PV+V L +L E
Sbjct: 429 AAAAADLANTTGGEVDAVAEIEEKDRLLKHVEARDLIEFGMIPEFVGRLPVVVPLHSLDE 488
Query: 543 NQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENI 602
LV++LTEP+NA+ QY+ +F M+ +L+ T +ALR IA+ A+ + TGARGLRS++E +
Sbjct: 489 ETLVRILTEPRNAVVPQYQALFSMDKCELNMTPDALRAIARLALERKTGARGLRSIMEKL 548
Query: 603 LMDAMYEIP 611
L+D M+E+P
Sbjct: 549 LLDPMFEVP 557
Score = 142 (55.0 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ+ AKKVLSVAVYNHY RIYN
Sbjct: 156 PPPKKIFAYLDKYVVGQDHAKKVLSVAVYNHYKRIYN 192
>UNIPROTKB|E1BX77 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625
EMBL:AADN02038940 IPI:IPI00820856 Ensembl:ENSGALT00000038419
ArrayExpress:E1BX77 Uniprot:E1BX77
Length = 617
Score = 771 (276.5 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 164/323 (50%), Positives = 226/323 (69%)
Query: 306 QKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGS-GKTLLAKTLARYVNVPFVIADAT 364
Q++ GE D +DD ++LEKSNILL+GPTGS GKTLLA+TLA+ ++VPF I D T
Sbjct: 250 QEKRGGE----VLDSPNDD-IKLEKSNILLLGPTGSAGKTLLAQTLAKCLDVPFAICDCT 304
Query: 365 TLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEG 424
TLTQAGYVGED+ES++ KLL ++YNV AQQGIV++DEVDKI ++ RDV GEG
Sbjct: 305 TLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEG 363
Query: 425 VQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS 484
VQQ LLK+LEGT+VNVPEK +RK RG+ +Q+DT +ILF+ GAF +++ IS R+ +
Sbjct: 364 VQQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKY 422
Query: 485 IGFGAP--VRANMRAGGVTDAVVTSS-------------LMETVESSDLIAYGLIPEFVG 529
+GFG P + RA D S L+ VE+ DLI +G+IPEFVG
Sbjct: 423 LGFGTPSNMGKGRRAAAAADLANISGESNTHEDIEEKDRLLRHVEARDLIEFGMIPEFVG 482
Query: 530 RFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKN 589
R PV+V L +L E LV++LTEP+NA+ QY+ +F M+ +L+ TE+AL+ IA+ A+ +
Sbjct: 483 RLPVVVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAIARLALERK 542
Query: 590 TGARGLRSLLENILMDAMYEIPD 612
TGARGLRS++E +L++ M+E+P+
Sbjct: 543 TGARGLRSIMEKLLLEPMFEVPN 565
Score = 134 (52.2 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 164 PPPKKIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYN 200
>TIGR_CMR|NSE_0753 [details] [associations]
symbol:NSE_0753 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] [GO:0051082 "unfolded protein binding"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 GO:GO:0017111 EMBL:CP000237
GenomeReviews:CP000237_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
OMA:IMFEVPS RefSeq:YP_506628.1 ProteinModelPortal:Q2GD18
STRING:Q2GD18 PRIDE:Q2GD18 GeneID:3931978 KEGG:nse:NSE_0753
PATRIC:22681511 BioCyc:NSEN222891:GHFU-764-MONOMER Uniprot:Q2GD18
Length = 400
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 178/345 (51%), Positives = 251/345 (72%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTV 326
TPK+I K D F+ QE AKK+LSVAVYNHY K G ++ V
Sbjct: 59 TPKDIKKYFDSFITAQEDAKKILSVAVYNHY---------KCFVGNR-------LNSKDV 102
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
E+ KSNIL++GPTG GKTL AKTLAR++NVPF I DAT++T+AGYVG+DVE+IL LL
Sbjct: 103 EITKSNILIIGPTGCGKTLFAKTLARFLNVPFAICDATSITEAGYVGDDVENILRMLLQS 162
Query: 387 SDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGAR 446
+DYNV AAQ+GIVYIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGT+ +VP +G R
Sbjct: 163 ADYNVEAAQKGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLKIMEGTIASVPPQGGR 222
Query: 447 KHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVT 506
KHP + IQIDT +ILFICGGAFV ++ I+ R+ +++GF + +++ V+
Sbjct: 223 KHPNQETIQIDTTNILFICGGAFVGLDNIIANRQSINTMGFKSELQSKE---------VS 273
Query: 507 SSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQM 566
++++ VE DL+ +G+IPEFVGR PV+ L LTE+ LV++L+ PKNAL KQY +F M
Sbjct: 274 PTILKKVEPEDLVKFGMIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALVKQYVCLFGM 333
Query: 567 NGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
+ ++L F++ AL+ +A+ AI + GARGLR+++E++L + M+E+P
Sbjct: 334 DNIQLSFSDEALKTVARAAIKRKVGARGLRAIMESVLRNYMFELP 378
>FB|FBgn0038745 [details] [associations]
symbol:CG4538 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051082 "unfolded
protein binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
GeneTree:ENSGT00390000017625 HSSP:O25926 RefSeq:NP_732463.1
UniGene:Dm.2399 ProteinModelPortal:Q8IN64 SMR:Q8IN64 STRING:Q8IN64
PaxDb:Q8IN64 PRIDE:Q8IN64 EnsemblMetazoa:FBtr0083856 GeneID:42369
KEGG:dme:Dmel_CG4538 UCSC:CG4538-RB FlyBase:FBgn0038745
InParanoid:Q8IN64 OrthoDB:EOG4RBP0W GenomeRNAi:42369 NextBio:828465
ArrayExpress:Q8IN64 Bgee:Q8IN64 Uniprot:Q8IN64
Length = 673
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 156/323 (48%), Positives = 222/323 (68%)
Query: 304 SSQKRSAGE--SSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIA 361
SS R G+ S S D D V+LEKSNI+++GPTGSGKTL+A+T+A+ ++VPF I
Sbjct: 300 SSNARGGGDNRSGSEILDRQSTD-VKLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAIC 358
Query: 362 DATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVS 421
D TTLTQAGYVGED+ES++ KLL ++YNV AQ GIV++DEVDKI ++ RDV
Sbjct: 359 DCTTLTQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDEVDKIGA-VPGIHQLRDVG 417
Query: 422 GEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ 481
GEGVQQ +LKMLEGTVVNVPE+ + + RG+ +Q+DT +ILF+ GA+ +++ I+ R
Sbjct: 418 GEGVQQGMLKMLEGTVVNVPERNSPRKLRGETVQVDTTNILFVASGAYTGLDRLIARRLN 477
Query: 482 DSSIGFGAPV------RANMRAGGV--TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPV 533
+ +GFG P RA A D + V++ DL+ +G+IPEFVGRFPV
Sbjct: 478 EKYLGFGMPSTSGSGRRAAQSAASPMDNDQEERDKCLTKVQARDLVEFGMIPEFVGRFPV 537
Query: 534 LVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGAR 593
+V +L + LV++LTEP+NAL QY+ + ++ V L FTE+A++ IA+ A+ ++TGAR
Sbjct: 538 IVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGAR 597
Query: 594 GLRSLLENILMDAMYEIP--DVR 614
GLRS++E +L+D M+ +P D+R
Sbjct: 598 GLRSIMEQLLLDPMFIVPGSDIR 620
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P++I + LDK V+GQ+ AKKVL+VAVYNHY RI++ Q ++ G +S G D
Sbjct: 190 PPPQKIMEYLDKHVVGQDFAKKVLAVAVYNHYKRIHHNLPQLQNQGAGASNGAGGGLDG- 248
Query: 326 VELEKSNILLMGPTGSGKTL 345
+ + ++L + TG G TL
Sbjct: 249 --IPRPDLLHI--TGIGHTL 264
>SGD|S000000431 [details] [associations]
symbol:MCX1 "Mitochondrial matrix protein" species:4932
"Saccharomyces cerevisiae" [GO:0005759 "mitochondrial matrix"
evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0042026 "protein refolding" evidence=IMP]
[GO:0006457 "protein folding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
SGD:S000000431 GO:GO:0005524 GO:GO:0005759 EMBL:BK006936
GO:GO:0017111 GO:GO:0042026 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625 EMBL:Z36096
PIR:S46103 RefSeq:NP_009786.1 ProteinModelPortal:P38323 SMR:P38323
DIP:DIP-6422N IntAct:P38323 MINT:MINT-4477678 STRING:P38323
PaxDb:P38323 EnsemblFungi:YBR227C GeneID:852528 KEGG:sce:YBR227C
CYGD:YBR227c OMA:QMASSEL OrthoDB:EOG4FXVH6 NextBio:971574
Genevestigator:P38323 GermOnline:YBR227C Uniprot:P38323
Length = 520
Score = 393 (143.4 bits), Expect = 1.5e-71, Sum P(3) = 1.5e-71
Identities = 85/173 (49%), Positives = 122/173 (70%)
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
VD+D +EL KSN+L++GP+GSGKTLLA TLA+ +NVP I D T LTQAGY+GEDVE +
Sbjct: 125 VDED-LELSKSNVLVVGPSGSGKTLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCI 183
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
+LL ++++VA A++GI+ +DE+DK+ K A S+ ++DVSGEGVQQ+LLK++EG V +
Sbjct: 184 ERLLVNAEFDVARAEKGIIVLDEIDKLAKPAASIG-TKDVSGEGVQQSLLKIIEGHKVEI 242
Query: 441 PEKGARKHP----------RGDNI-QIDTKDILFICGGAFVDIEKTISERRQD 482
K KH + D + +DT +ILF+ GAFV ++K I +R +D
Sbjct: 243 TVKRPVKHDIDGQKNQTTTKKDEVFVVDTSNILFMIMGAFVGLDKHIVKRIED 295
Score = 231 (86.4 bits), Expect = 1.5e-71, Sum P(3) = 1.5e-71
Identities = 42/102 (41%), Positives = 69/102 (67%)
Query: 510 METVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGV 569
++ +DL+++GLIPE +GR P++ +L L + L +L EPKNAL QY +F+ GV
Sbjct: 342 LDLTTPTDLVSFGLIPELIGRVPIITALQPLQRDDLFHILKEPKNALLDQYEYIFKQFGV 401
Query: 570 KLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
+L T+ AL+ +A+ A+ + TGARGLR ++E +L++ Y+ P
Sbjct: 402 RLCVTQKALKKVAQFALKEGTGARGLRGIMERLLLNVNYDCP 443
Score = 142 (55.0 bits), Expect = 1.5e-71, Sum P(3) = 1.5e-71
Identities = 32/72 (44%), Positives = 40/72 (55%)
Query: 236 NLVRXXXXXXXXXXXXKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
N R G S L N PTPK + K LD++++GQE KKVLSVAVYN
Sbjct: 8 NFFRAYSSRIGRYAATASGKLAQSRLSN-IPTPKALKKFLDEYIVGQEIGKKVLSVAVYN 66
Query: 296 HYMRIYNESSQK 307
HY+RI N+ +K
Sbjct: 67 HYLRI-NDKQKK 77
>ASPGD|ASPL0000057717 [details] [associations]
symbol:AN0349 species:162425 "Emericella nidulans"
[GO:0042026 "protein refolding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 EMBL:BN001308 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 EMBL:AACD01000006 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 OrthoDB:EOG4FXVH6 RefSeq:XP_657953.1
ProteinModelPortal:Q5BGI1 STRING:Q5BGI1
EnsemblFungi:CADANIAT00002357 GeneID:2876125 KEGG:ani:AN0349.2
OMA:DAMFETP Uniprot:Q5BGI1
Length = 630
Score = 339 (124.4 bits), Expect = 9.2e-67, Sum P(4) = 9.2e-67
Identities = 67/139 (48%), Positives = 100/139 (71%)
Query: 315 SCTTDG--VDDDT-VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
S TD +D+ + +++EKSN+LL+GP+G GKTL+ ++LAR ++VPF I+D T TQAGY
Sbjct: 182 SYATDNAEIDESSQLQIEKSNVLLLGPSGVGKTLMCRSLARVLSVPFSISDCTPFTQAGY 241
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
+G+D E +++LL ++Y+V A++GI+ +DE+DKI A ++ RDV G GVQ++LLK
Sbjct: 242 IGDDAEVCVHRLLAAANYDVEQAERGIIVLDEIDKIA--AAKVSHGRDVGGSGVQESLLK 299
Query: 432 MLEGTVVNVPEKGARKHPR 450
+LEGT V V K R PR
Sbjct: 300 LLEGTTVQVQAKQERSAPR 318
Score = 246 (91.7 bits), Expect = 9.2e-67, Sum P(4) = 9.2e-67
Identities = 49/102 (48%), Positives = 69/102 (67%)
Query: 510 METVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGV 569
++ + +DL YG IPE VGR PV +L AL++ LV++LTEP+N+L QY +F ++G+
Sbjct: 449 LDLINQTDLQNYGFIPELVGRIPVNAALSALSQPLLVRILTEPRNSLVAQYTTLFSLSGI 508
Query: 570 KLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP 611
+L FT AL IA A + TGAR LR+ +E IL DAM+E P
Sbjct: 509 ELRFTTPALHKIAANAFTMGTGARALRTEMETILSDAMFETP 550
Score = 134 (52.2 bits), Expect = 9.2e-67, Sum P(4) = 9.2e-67
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGE 312
TPK + + LD+FV+GQERAKK+LSVAVYNHY R+ E +++ E
Sbjct: 80 TPKSLKQYLDQFVVGQERAKKILSVAVYNHYQRV-QELQRRQEEAE 124
Score = 108 (43.1 bits), Expect = 9.2e-67, Sum P(4) = 9.2e-67
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 435 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR 492
G P G +G+ + T +ILFIC GAF + K + +R S+GFG PVR
Sbjct: 334 GNTPFTPPGGGNVPHKGEVYNVRTDNILFICSGAFAGLHKVVMDRISRGSMGFGQPVR 391
>WB|WBGene00019461 [details] [associations]
symbol:K07A3.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 EMBL:FO080962 GeneID:171817
KEGG:cel:CELE_K07A3.3 CTD:171817 RefSeq:NP_001021562.1
ProteinModelPortal:Q65XY4 SMR:Q65XY4 STRING:Q65XY4 PRIDE:Q65XY4
EnsemblMetazoa:K07A3.3b UCSC:K07A3.3b WormBase:K07A3.3b
InParanoid:Q65XY4 OMA:PFHCLDK NextBio:872825 ArrayExpress:Q65XY4
Uniprot:Q65XY4
Length = 518
Score = 575 (207.5 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 127/302 (42%), Positives = 194/302 (64%)
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
L+KSN++L+G +G+GKT + + LA ++VP VI D TTLTQAGYVG+DV++++ KLL +
Sbjct: 192 LDKSNMILLGASGTGKTFMTQKLAEVLDVPIVICDCTTLTQAGYVGDDVDTVIQKLLAEA 251
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNIS--RDVSGEGVQQALLKMLEGTVVNVPEKGA 445
++ Q+GIV++DE DKI ++ L+ S RDVSG+GVQQALLK++EG++V V + A
Sbjct: 252 MGDIEKCQRGIVFLDEFDKIYTSSDPLHTSGNRDVSGKGVQQALLKLVEGSLVKVRDPLA 311
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT---- 501
P + IDT +ILFI GAF +IE ++ R S+GF + + T
Sbjct: 312 ---PNS-KVTIDTSNILFIASGAFSNIEHIVARRMDKRSLGFLSATSPHKLGDQDTTEKL 367
Query: 502 ----DAVVTSSLMETV---ESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKN 554
+ +V+ + E + + DLI++G+IPE VGRFPV+V L + L+ VLTEP+
Sbjct: 368 RDSDEEIVSKARNEMIKQCDQGDLISFGMIPELVGRFPVIVPFHCLDKTHLMSVLTEPRG 427
Query: 555 ALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAMYEIP--D 612
+L Q +K F+ V+L F+ A+ IA+ A+ + TGAR L+S++E +M+A YE+P D
Sbjct: 428 SLIAQTKKFFENENVELRFSPAAIEAIAEMAVKRKTGARALKSIVEKAVMNAKYEVPGSD 487
Query: 613 VR 614
V+
Sbjct: 488 VK 489
Score = 118 (46.6 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
PKEI + L+K+V+GQE AKK L+VAVY HY R+ N
Sbjct: 101 PKEIVEHLNKYVVGQEEAKKYLAVAVYQHYRRVEN 135
>WB|WBGene00008412 [details] [associations]
symbol:D2030.2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 HSSP:O25926 EMBL:Z73906 OMA:QMASSEL
PIR:T20353 RefSeq:NP_001021076.1 ProteinModelPortal:P90788
SMR:P90788 STRING:P90788 PaxDb:P90788 PRIDE:P90788
EnsemblMetazoa:D2030.2a.1 EnsemblMetazoa:D2030.2a.2
EnsemblMetazoa:D2030.2a.3 GeneID:172511 KEGG:cel:CELE_D2030.2
UCSC:D2030.2a.1 CTD:172511 WormBase:D2030.2a InParanoid:P90788
NextBio:875833 ArrayExpress:P90788 Uniprot:P90788
Length = 586
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 153/364 (42%), Positives = 227/364 (62%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES---S 314
G +L N PK + +G+ F + R ++ S + N M+ ++Q S +S +
Sbjct: 184 GKSLSNDGMDPK-MPRGV--FYQDELRLGQMASSELRNSIMQ-QQSNNQPPSPAQSPRNA 239
Query: 315 SCTTDGV--DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYV 372
+ T + + +V LEKSN+LL+GP+G GKT L +TLAR ++VP + D T++TQAGYV
Sbjct: 240 APTFRALPEKEQSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYV 299
Query: 373 GEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNIS-RDVSGEGVQQALLK 431
GEDVES++ KL+ + NV AQQGIV++DEVDKI E + + RDVSGEGVQ ALLK
Sbjct: 300 GEDVESVIQKLVQAAGGNVEKAQQGIVFLDEVDKIAAAHEGHSAAYRDVSGEGVQHALLK 359
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV 491
++EGTVVNV + D +QIDT DILFI GAF +++K + R ++GFG
Sbjct: 360 LVEGTVVNVKSGKKGMGSQQDQVQIDTTDILFIASGAFSNLDKIVGRRLDKKALGFGTS- 418
Query: 492 RANMR-AGGVTDAVVT---SSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQ 547
N+R +G +++ V L+ + DLI++G++PE VGRFPVLV + + LV+
Sbjct: 419 SGNVRISGDDSNSEVMRKRDELLSKADQGDLISFGMVPELVGRFPVLVPFHSFDKQMLVR 478
Query: 548 VLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIAKKAISKNTGARGLRSLLENILMDAM 607
V+TEP+N+L Q + F ++ V L F+ AL +A+ A+ + TGAR LRS+LE L++A
Sbjct: 479 VMTEPQNSLLAQLKLQFGIDNVDLSFSAEALEQVAQLALDRKTGARALRSILEAALLEAK 538
Query: 608 YEIP 611
+ +P
Sbjct: 539 FTVP 542
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMR-----------IYNESSQKRSAGESS 314
P P +I + LDKFV+GQ++AKK L+V VY HY R IY +Q S+G+S
Sbjct: 128 PYPTQIAEYLDKFVVGQKKAKKTLAVGVYQHYRRLEHNIETGASSIYQTHAQTSSSGKSL 187
Query: 315 SCTTDGVD 322
S DG+D
Sbjct: 188 S--NDGMD 193
>TIGR_CMR|CHY_1790 [details] [associations]
symbol:CHY_1790 "heat shock protein HslVU, ATPase subunit
HslU" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_00249
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006200 GO:GO:0016887 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_360610.1
ProteinModelPortal:Q3AB74 SMR:Q3AB74 STRING:Q3AB74 GeneID:3728442
KEGG:chy:CHY_1790 PATRIC:21276691
BioCyc:CHYD246194:GJCN-1789-MONOMER Uniprot:Q3AB74
Length = 461
Score = 185 (70.2 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 42/96 (43%), Positives = 59/96 (61%)
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIA 582
LIPE GRFP+ V L +LT ++LT P+NAL KQY ++ GV L FTE++L IA
Sbjct: 336 LIPELQGRFPIRVELKSLTVEDFKKILTVPENALTKQYVELLATEGVNLKFTEDSLEEIA 395
Query: 583 KKAIS-----KNTGARGLRSLLENILMDAMYEIPDV 613
K A + +N GAR L ++LE +L D + P++
Sbjct: 396 KMAYTVNERNENIGARRLITILEKVLEDLSFNAPEM 431
Score = 151 (58.2 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
E+ NIL++GPTG GKT +A+ LA+ + PFV +AT T+ GYVG DVE ++ L+
Sbjct: 47 EIIPKNILMIGPTGVGKTEIARRLAKLIKAPFVKVEATKFTEVGYVGRDVEGMIRDLVET 106
Query: 387 S 387
S
Sbjct: 107 S 107
Score = 97 (39.2 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMR 299
TP++I + LDK++IGQE AKK ++VA+ N Y R
Sbjct: 5 TPRQIVEYLDKYIIGQEAAKKAVAVALRNRYRR 37
Score = 92 (37.4 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGD 452
A + GIV++DE+DKI + DVS GVQ+ +L ++EG+ V + + G P
Sbjct: 265 AEEDGIVFLDEIDKIASTGNTHG--PDVSRGGVQRDILPIVEGSTV-LTKYG----P--- 314
Query: 453 NIQIDTKDILFICGGAF 469
+ T ILFI GAF
Sbjct: 315 ---VKTDHILFIAAGAF 328
>TIGR_CMR|SO_4163 [details] [associations]
symbol:SO_4163 "heat shock protein HslVU, ATPase subunit
HslU" species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0009376 "HslUV protease complex"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_719692.1 ProteinModelPortal:Q8E9U9 SMR:Q8E9U9
GeneID:1171770 KEGG:son:SO_4163 PATRIC:23527956 Uniprot:Q8E9U9
Length = 440
Score = 163 (62.4 bits), Expect = 2.4e-32, Sum P(4) = 2.4e-32
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIA 582
LIPE GR P+ V L ALT + ++LTEP +L +QY + GV + FTE+ + IA
Sbjct: 315 LIPELQGRLPIRVELDALTADDFKRILTEPHASLTEQYIALMATEGVIIEFTESGIESIA 374
Query: 583 KKAI-----SKNTGARGLRSLLENILMDAMYEIPD 612
K A ++N GAR L +++E ++ D YE D
Sbjct: 375 KAAWQVNERTENIGARRLHTVMEKLMEDISYEASD 409
Score = 152 (58.6 bits), Expect = 2.4e-32, Sum P(4) = 2.4e-32
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
E+ NIL++GPTG GKT +A+ LA+ N PF+ +AT T+ GYVG++VE I+ L +
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVEQIIRDLTDI 106
Query: 387 S 387
+
Sbjct: 107 A 107
Score = 120 (47.3 bits), Expect = 2.4e-32, Sum P(4) = 2.4e-32
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 395 QQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNI 454
Q GIV++DE+DKI K+ E+ DVS EGVQ+ LL ++EG V KH G
Sbjct: 246 QNGIVFLDEIDKICKRGETSG--PDVSREGVQRDLLPLVEGCTVTT------KH--G--- 292
Query: 455 QIDTKDILFICGGAF 469
+ T ILFI GAF
Sbjct: 293 MVKTDHILFIASGAF 307
Score = 79 (32.9 bits), Expect = 2.4e-32, Sum P(4) = 2.4e-32
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI 300
TP+EI LD +IGQ++AK+ ++VA+ N + R+
Sbjct: 5 TPREIVHELDAHIIGQKKAKRSVAVALRNRWRRM 38
>TIGR_CMR|NSE_0177 [details] [associations]
symbol:NSE_0177 "heat shock protein HslVU, ATPase subunit
HslU" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009376 "HslUV protease
complex" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 GO:GO:0006200 GO:GO:0016887
EMBL:CP000237 GenomeReviews:CP000237_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:YP_506072.1 ProteinModelPortal:Q2GEM4 SMR:Q2GEM4
STRING:Q2GEM4 GeneID:3931406 KEGG:nse:NSE_0177 PATRIC:22680453
BioCyc:NSEN222891:GHFU-208-MONOMER Uniprot:Q2GEM4
Length = 472
Score = 161 (61.7 bits), Expect = 1.0e-29, Sum P(4) = 1.0e-29
Identities = 35/95 (36%), Positives = 59/95 (62%)
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIA 582
L+PE GR P+ V L +L ++++LTE +++L KQY + + GV L FT++ +R IA
Sbjct: 347 LLPELQGRLPIRVELDSLDVEDMIRILTETESSLLKQYCALLETEGVSLEFTKDGVRAIA 406
Query: 583 KKAIS-----KNTGARGLRSLLENILMDAMYEIPD 612
+ AI+ +N GAR L +++E +L + +E D
Sbjct: 407 EAAITVNNEVENIGARRLHTIMETLLEEINFEAND 441
Score = 146 (56.5 bits), Expect = 1.0e-29, Sum P(4) = 1.0e-29
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
E+ NIL++GPTG GKT +A+ +A+ PF+ +AT T+ GYVG DVESI+ L+
Sbjct: 70 EIIPKNILMIGPTGVGKTEIARRVAKLSGAPFIKVEATKFTEVGYVGRDVESIIRDLV 127
Score = 105 (42.0 bits), Expect = 1.0e-29, Sum P(4) = 1.0e-29
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 375 DVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 434
+VE + + + + +G+V+IDE+DKI + E + +V+ EGVQ+ LL +LE
Sbjct: 259 EVEDLFDEDAIIKEALDLVTNRGMVFIDEIDKICARTE---VRGEVNREGVQRDLLPLLE 315
Query: 435 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 469
GT V V + G K T ILF+ GAF
Sbjct: 316 GTTV-VTKYGVVK----------TDHILFVGSGAF 339
Score = 79 (32.9 bits), Expect = 1.0e-29, Sum P(4) = 1.0e-29
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMR 299
PK + LD+FV+GQ+ AKK +++A+ N + R
Sbjct: 29 PKALVSYLDRFVVGQKLAKKKIAIAIRNRWRR 60
>UNIPROTKB|P0A6H5 [details] [associations]
symbol:hslU species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0070011 "peptidase
activity, acting on L-amino acid peptides" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009376 "HslUV
protease complex" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006200 GO:GO:0016887 GO:GO:0009408
EMBL:L19201 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:JT0761
RefSeq:NP_418366.1 RefSeq:YP_491520.1 PDB:1DO0 PDB:1DO2 PDB:1E94
PDB:1G4A PDB:1G4B PDB:1HQY PDB:1HT1 PDB:1HT2 PDB:1YYF PDBsum:1DO0
PDBsum:1DO2 PDBsum:1E94 PDBsum:1G4A PDBsum:1G4B PDBsum:1HQY
PDBsum:1HT1 PDBsum:1HT2 PDBsum:1YYF ProteinModelPortal:P0A6H5
SMR:P0A6H5 DIP:DIP-31855N IntAct:P0A6H5 SWISS-2DPAGE:P0A6H5
PaxDb:P0A6H5 PRIDE:P0A6H5 EnsemblBacteria:EBESCT00000003987
EnsemblBacteria:EBESCT00000018172 GeneID:12932793 GeneID:948430
KEGG:ecj:Y75_p3256 KEGG:eco:b3931 PATRIC:32123377 EchoBASE:EB1827
EcoGene:EG11881 BioCyc:EcoCyc:EG11881-MONOMER
BioCyc:ECOL316407:JW3902-MONOMER EvolutionaryTrace:P0A6H5
Genevestigator:P0A6H5 Uniprot:P0A6H5
Length = 443
Score = 171 (65.3 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 63/244 (25%), Positives = 123/244 (50%)
Query: 388 DYNVAAAQQGIVYIDE--VDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+ ++AAA G+ + ++++T + +S+ +++ G+ + LK+ + + + E+ A
Sbjct: 174 EIDLAAAPMGVEIMAPPGMEEMTSQLQSM--FQNLGGQKQKARKLKIKDAMKLLIEEEAA 231
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVD-IEKTISERRQDSSIGFGAP-VRANMR--AGGVT 501
K + ++ D D + G F+D I+K I +R + S V+ ++ G T
Sbjct: 232 -KLVNPEELKQDAIDAVEQHGIVFIDEIDK-ICKRGESSGPDVSREGVQRDLLPLVEGCT 289
Query: 502 DA-----VVTSSLMETVESSDLIAY--GLIPEFVGRFPVLVSLLALTENQLVQVLTEPKN 554
+ V T ++ + IA LIPE GR P+ V L ALT + ++LTEP
Sbjct: 290 VSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNA 349
Query: 555 ALGKQYRKMFQMNGVKLHFTENALRLIAKKA-----ISKNTGARGLRSLLENILMDAMYE 609
++ QY+ + GV + FT++ ++ IA+ A ++N GAR L ++LE ++ + Y+
Sbjct: 350 SITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYD 409
Query: 610 IPDV 613
D+
Sbjct: 410 ASDL 413
Score = 155 (59.6 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
E+ NIL++GPTG GKT +A+ LA+ N PF+ +AT T+ GYVG++V+SI +
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSI------I 100
Query: 387 SDYNVAAAQQGIVYIDEVDKITKKAESL 414
D AA + +V + ++K +AE L
Sbjct: 101 RDLTDAAVK--MVRVQAIEKNRYRAEEL 126
Score = 85 (35.0 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIY-NE 303
TP+EI LDK +IGQ+ AK+ +++A+ N + R+ NE
Sbjct: 5 TPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNE 42
>UNIPROTKB|Q9KNQ7 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006200 GO:GO:0006508 GO:GO:0016887
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 PIR:E82046 RefSeq:NP_232302.1
ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7 DNASU:2615502 GeneID:2615502
KEGG:vch:VC2674 PATRIC:20084366 Uniprot:Q9KNQ7
Length = 443
Score = 165 (63.1 bits), Expect = 5.1e-25, Sum P(3) = 5.1e-25
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ NIL++GPTG GKT +A+ LA+ NVPF+ +AT T+ GYVG++VESI+ L
Sbjct: 46 VEVTPKNILMIGPTGVGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTD 105
Query: 386 VS 387
V+
Sbjct: 106 VA 107
Score = 155 (59.6 bits), Expect = 5.1e-25, Sum P(3) = 5.1e-25
Identities = 64/237 (27%), Positives = 109/237 (45%)
Query: 388 DYNVAAAQQGIVYIDE--VDKITKKAESL--NISRDVSGEG---VQQALLKMLEGTVVNV 440
+ NVA Q G+ + ++++T + + L N++ D + ++ AL ++E +
Sbjct: 174 EINVAVPQMGVEIMAPPGMEEMTNQLQGLFQNLAGDTKKKRKMKIKDALKALVEEEAAKL 233
Query: 441 PEKGARKHPRGDNIQ----IDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ K N++ + +I IC V E Q + + +
Sbjct: 234 VNQEELKEQAIYNVENNGIVFIDEIDKICKRGEVSGPDVSREGVQRDLLPLIEGSTVSTK 293
Query: 497 AGGV-TDAV--VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
G V TD + + S + + SDLI PE GR P+ V L AL+ N ++LTEPK
Sbjct: 294 HGMVRTDHILFIASGAFQVAKPSDLI-----PELQGRLPIRVELEALSSNDFKRILTEPK 348
Query: 554 NALGKQYRKMFQMNGVKLHFTENALRLIAKKA-----ISKNTGARGLRSLLENILMD 605
+L +QY + + V + FTE+ ++ IA A ++N GAR L ++LE LMD
Sbjct: 349 ASLTEQYVALMKTEQVDVQFTEDGIKQIADAAWQVNETTENIGARRLHTVLER-LMD 404
Score = 85 (35.0 bits), Expect = 5.1e-25, Sum P(3) = 5.1e-25
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESS 305
TP+EI L++ +IGQ++AK+ +++A+ N + R+ E S
Sbjct: 5 TPREIVSELNRHIIGQDKAKRAVAIALRNRWRRMQLEES 43
>TIGR_CMR|VC_2674 [details] [associations]
symbol:VC_2674 "protease HslVU, ATPase subunit HslU"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006200 GO:GO:0006508 GO:GO:0016887 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:E82046
RefSeq:NP_232302.1 ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7
DNASU:2615502 GeneID:2615502 KEGG:vch:VC2674 PATRIC:20084366
Uniprot:Q9KNQ7
Length = 443
Score = 165 (63.1 bits), Expect = 5.1e-25, Sum P(3) = 5.1e-25
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ NIL++GPTG GKT +A+ LA+ NVPF+ +AT T+ GYVG++VESI+ L
Sbjct: 46 VEVTPKNILMIGPTGVGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTD 105
Query: 386 VS 387
V+
Sbjct: 106 VA 107
Score = 155 (59.6 bits), Expect = 5.1e-25, Sum P(3) = 5.1e-25
Identities = 64/237 (27%), Positives = 109/237 (45%)
Query: 388 DYNVAAAQQGIVYIDE--VDKITKKAESL--NISRDVSGEG---VQQALLKMLEGTVVNV 440
+ NVA Q G+ + ++++T + + L N++ D + ++ AL ++E +
Sbjct: 174 EINVAVPQMGVEIMAPPGMEEMTNQLQGLFQNLAGDTKKKRKMKIKDALKALVEEEAAKL 233
Query: 441 PEKGARKHPRGDNIQ----IDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ K N++ + +I IC V E Q + + +
Sbjct: 234 VNQEELKEQAIYNVENNGIVFIDEIDKICKRGEVSGPDVSREGVQRDLLPLIEGSTVSTK 293
Query: 497 AGGV-TDAV--VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
G V TD + + S + + SDLI PE GR P+ V L AL+ N ++LTEPK
Sbjct: 294 HGMVRTDHILFIASGAFQVAKPSDLI-----PELQGRLPIRVELEALSSNDFKRILTEPK 348
Query: 554 NALGKQYRKMFQMNGVKLHFTENALRLIAKKA-----ISKNTGARGLRSLLENILMD 605
+L +QY + + V + FTE+ ++ IA A ++N GAR L ++LE LMD
Sbjct: 349 ASLTEQYVALMKTEQVDVQFTEDGIKQIADAAWQVNETTENIGARRLHTVLER-LMD 404
Score = 85 (35.0 bits), Expect = 5.1e-25, Sum P(3) = 5.1e-25
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESS 305
TP+EI L++ +IGQ++AK+ +++A+ N + R+ E S
Sbjct: 5 TPREIVSELNRHIIGQDKAKRAVAIALRNRWRRMQLEES 43
>TIGR_CMR|CBU_2012 [details] [associations]
symbol:CBU_2012 "heat shock protein HslVU, ATPase subunit
HslU" species:227377 "Coxiella burnetii RSA 493" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:NP_820987.2 ProteinModelPortal:Q83A94
SMR:Q83A94 PRIDE:Q83A94 GeneID:1209925 KEGG:cbu:CBU_2012
PATRIC:17932769 BioCyc:CBUR227377:GJ7S-1986-MONOMER Uniprot:Q83A94
Length = 447
Score = 170 (64.9 bits), Expect = 7.4e-25, Sum P(3) = 7.4e-25
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIA 582
L+PE GRFP+ V L ALT + V++LTEPK +L +QY ++ + L FT++ ++ +A
Sbjct: 322 LVPELQGRFPIRVELKALTADDFVRILTEPKASLTEQYTELLKTENFGLSFTKDGIKRLA 381
Query: 583 KKAI-----SKNTGARGLRSLLENILMDAMYEIPD 612
+ A S+N GAR L +++E +L + +E D
Sbjct: 382 EIAYQVNDRSENIGARRLHTIMERLLEEVSFEATD 416
Score = 145 (56.1 bits), Expect = 7.4e-25, Sum P(3) = 7.4e-25
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
E+ NIL++GPTG GKT +A+ L+ PF+ +AT T+ GYVG DVESI+ L+ V
Sbjct: 46 EIFPKNILMIGPTGVGKTEIARRLSDLAGAPFLKIEATKFTEVGYVGRDVESIIRDLVDV 105
Query: 387 S 387
+
Sbjct: 106 A 106
Score = 117 (46.2 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 321 VDDDTVELEKS---NILLMGPTGSGKTL-----LAKTLA--RYVNVPFVIADATTLTQAG 370
+DD +E+E S + +MGP G + + + +++ R + + DA +
Sbjct: 173 LDDKEIEVEVSAHPSFEIMGPPGMEEMVSQLQGIMSSMSSRRSKSRRLKVKDALRI---- 228
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQ-GIVYIDEVDKITKKAESLNISRDVSGEGVQQAL 429
+GE+ + L + +A+ +Q GIV+IDE+DKI K+ + + DVS EGVQ+ L
Sbjct: 229 -LGEEEAAKLVDEDQIKSTALASVEQNGIVFIDEIDKIVKREGA--VGADVSREGVQRDL 285
Query: 430 LKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 469
L ++EG+ V K+ G + T ILFI GAF
Sbjct: 286 LPLVEGSTVFT------KY--G---MVKTDHILFIASGAF 314
Score = 88 (36.0 bits), Expect = 7.4e-25, Sum P(3) = 7.4e-25
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI 300
TP+EI LDKF+IGQ AK+ +++A+ N + R+
Sbjct: 4 TPREIVAELDKFIIGQNDAKRAVAIALRNRWRRM 37
>TIGR_CMR|CJE_0764 [details] [associations]
symbol:CJE_0764 "heat shock protein HslVU, ATPase subunit
HslU" species:195099 "Campylobacter jejuni RM1221" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006200 GO:GO:0016887 EMBL:CP000025
GenomeReviews:CP000025_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 RefSeq:YP_178773.1 ProteinModelPortal:Q5HVB2
SMR:Q5HVB2 STRING:Q5HVB2 GeneID:3230716 KEGG:cjr:CJE0764
PATRIC:20043261 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 BioCyc:CJEJ195099:GJC0-780-MONOMER
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 Uniprot:Q5HVB2
Length = 439
Score = 164 (62.8 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 37/92 (40%), Positives = 56/92 (60%)
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIA 582
LIPE GRFP+ V L +L + L ++LT PKN+L KQY ++ + ++L F + A++ IA
Sbjct: 314 LIPELQGRFPLRVELDSLDDKALYEILTRPKNSLLKQYSQLLKTENLELEFNDEAIKEIA 373
Query: 583 KKAISKNT-----GARGLRSLLENILMDAMYE 609
K A N GAR L +++E +L D +E
Sbjct: 374 KIASRANEEMQDIGARRLHTVIEKLLEDLSFE 405
Score = 133 (51.9 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
+ DD V NIL++G TG GKT +A+ LA+ + PF+ +A+ T+ G+VG DVES++
Sbjct: 43 LQDDIVP---KNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMV 99
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDK 406
L + N+ +Q D++D+
Sbjct: 100 RDLANAA-LNLVKNEQREKNKDKIDE 124
Score = 108 (43.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 56/206 (27%), Positives = 89/206 (43%)
Query: 275 LDKFVIGQ--ERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSN 332
+D+F+ + E+ L + + Y S +K + +D+ T+E+E S
Sbjct: 122 IDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMR----TKLRNGNLDESTIEIEISQ 177
Query: 333 ILL-----MGPTGSGKTLLAKTL---ARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+ + P + K + ++ V I DA + E E IL +
Sbjct: 178 NMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKNALK----NEAGEKILDQES 233
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK- 443
S+ A +GI++IDE+DKI + + N +D S EGVQ+ LL ++EG+ NV K
Sbjct: 234 IKSEALKRAENEGIIFIDEIDKIAVSSGNSN-RQDPSKEGVQRDLLPIVEGS--NVQTKI 290
Query: 444 GARKHPRGDNIQIDTKDILFICGGAF 469
G K T ILFI GAF
Sbjct: 291 GTLK----------TDHILFIAAGAF 306
Score = 105 (42.0 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI 300
TPKEI K LD +VIGQ++AKK++++A+ N Y R+
Sbjct: 4 TPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRM 37
>TIGR_CMR|CPS_4370 [details] [associations]
symbol:CPS_4370 "heat shock protein HslVU, ATPase subunit
HslU" species:167879 "Colwellia psychrerythraea 34H" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0006200 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P0A6H5
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_271019.1
ProteinModelPortal:Q47W03 SMR:Q47W03 STRING:Q47W03 GeneID:3518888
KEGG:cps:CPS_4370 PATRIC:21471585
BioCyc:CPSY167879:GI48-4379-MONOMER Uniprot:Q47W03
Length = 443
Score = 170 (64.9 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 65/240 (27%), Positives = 117/240 (48%)
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
+ ++AA Q G+ + ++ N+ +++S E + LK ++ + + E+ A K
Sbjct: 173 ELDLAAPQVGVEIMAPPGMEDMTSQLQNMFQNMSSEKTNKRKLK-IKDALKALQEEEAAK 231
Query: 448 HPRGDNIQIDTKDILFICGGAFVD-IEKTISERRQDSSIGFGAPVRANMRAG--GVTDAV 504
D+I+ D + G F+D I+K +R DSS G G R ++ + +
Sbjct: 232 IVNQDDIKQKAIDAVEQNGIVFIDEIDKIC--KRADSS-GGGDVSREGVQRDLLPLVEGS 288
Query: 505 VTSSLMETVESSDL--IAYG---------LIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
S+ +++ + IA G LIPE GR P+ V L ALT + V++LTEP
Sbjct: 289 TVSTKHGMIKTDHILFIASGAFQMTKPSDLIPELQGRLPIRVELQALTADDFVRILTEPF 348
Query: 554 NALGKQYRKMFQMNGVKLHFTENALRLIAKKA-----ISKNTGARGLRSLLENILMDAMY 608
+L +QY + GV + FT++ ++ IA A ++N GAR L +++E ++ D +
Sbjct: 349 ASLTEQYIALLATEGVSVTFTDDGIKAIADSAWQVNETTENIGARRLHTMMERLVEDLSF 408
Score = 146 (56.5 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
E+ NIL++GPTG GKT +A+ LA+ + PF+ +AT T+ GYVG++VE+I+ L
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLAHAPFIKVEATKFTEVGYVGKEVETIIRDL 103
Score = 75 (31.5 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI 300
TP+EI LD ++GQ AK+ +++A+ N + R+
Sbjct: 5 TPREIVHELDSHIVGQSDAKRAVAIALRNRWRRM 38
>TIGR_CMR|SPO_3882 [details] [associations]
symbol:SPO_3882 "heat shock protein HslVU, ATPase subunit
HslU" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_169070.1 ProteinModelPortal:Q5LLP0
SMR:Q5LLP0 GeneID:3196200 KEGG:sil:SPO3882 PATRIC:23381271
Uniprot:Q5LLP0
Length = 435
Score = 159 (61.0 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 42/112 (37%), Positives = 61/112 (54%)
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DD E+ NIL++GPTG GKT +++ LA+ PF+ +AT T+ GYVG DVE I+
Sbjct: 42 DDLRDEVYPKNILMIGPTGVGKTEISRRLAKLARAPFIKVEATKFTEVGYVGRDVEQIIR 101
Query: 382 KLLTVSDYNVAAAQQGIVYI-DEVDKITKKAESLNISRDVSGEGVQQALLKM 432
L +D AA Q Y+ DEV KA + ++GE ++ +M
Sbjct: 102 DL---AD---AAIVQTRDYMRDEVRARAHKAAEDRVITAIAGEDAREGTREM 147
Score = 144 (55.7 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIA 582
L+PE GR P+ V L ALTE V++LTE NAL QY + V + FT + + +A
Sbjct: 310 LLPELQGRLPIRVELRALTEEDFVRILTETDNALTLQYTALMGTENVAVTFTPDGIAALA 369
Query: 583 KKAIS-----KNTGARGLRSLLENILMDAMYEIPD 612
A +N GAR L +++E + + + PD
Sbjct: 370 HIAAEVNQSVENIGARRLYTVMERVFEELSFTAPD 404
Score = 127 (49.8 bits), Expect = 5.5e-20, Sum P(3) = 5.5e-20
Identities = 37/98 (37%), Positives = 54/98 (55%)
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
+GE+ + +L L A Q GIV++DE+DK+ ++++ DVS EGVQ+ LL
Sbjct: 218 IGEEADKLLDDELVNKTALEAVEQNGIVFLDEIDKVCARSDARGA--DVSREGVQRDLLP 275
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 469
++EGT V+ K+ G I T ILFI GAF
Sbjct: 276 LIEGTTVST------KY--GP---IKTDHILFIASGAF 302
Score = 87 (35.7 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMR 299
TP+EI LD+F+IGQ+ AK+ ++VA+ N + R
Sbjct: 5 TPREIVSELDRFIIGQKDAKRAVAVALRNRWRR 37
>UNIPROTKB|P43773 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:71421 "Haemophilus influenzae Rd KW20" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:L42023 GenomeReviews:L42023_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_438655.1 PDB:1G3I PDB:1G41 PDB:1IM2 PDB:1KYI PDB:1OFH
PDB:1OFI PDBsum:1G3I PDBsum:1G41 PDBsum:1IM2 PDBsum:1KYI
PDBsum:1OFH PDBsum:1OFI ProteinModelPortal:P43773 SMR:P43773
DIP:DIP-6175N IntAct:P43773 GeneID:950614 KEGG:hin:HI0497
PATRIC:20189545 EvolutionaryTrace:P43773 Uniprot:P43773
Length = 444
Score = 156 (60.0 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 50/154 (32%), Positives = 79/154 (51%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
E+ NIL++GPTG GKT +A+ LA+ N PF+ +AT T+ GYVG++V+SI+ L
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL--- 103
Query: 387 SDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL---KMLEGTVVNVPEK 443
+D + +Q E+ K +AE DV+ E + ALL K G V N
Sbjct: 104 TDSAMKLVRQ-----QEIAKNRARAE------DVAEERILDALLPPAKNQWGEVENHDSH 152
Query: 444 GARKHPRGDNI---QIDTKDI-LFICGGAFVDIE 473
+ + + Q+D K+I + + G + +E
Sbjct: 153 SSTRQAFRKKLREGQLDDKEIEIDVSAGVSMGVE 186
Score = 148 (57.2 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 40/112 (35%), Positives = 61/112 (54%)
Query: 501 TDAV--VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
TD + + S + SDLI PE GR P+ V L AL+ ++LTEP +L +
Sbjct: 300 TDHILFIASGAFQVARPSDLI-----PELQGRLPIRVELTALSAADFERILTEPHASLTE 354
Query: 559 QYRKMFQMNGVKLHFTENALRLIAKKAI-----SKNTGARGLRSLLENILMD 605
QY+ + GV + FT +A++ IA+ A ++N GAR L +++E LMD
Sbjct: 355 QYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMER-LMD 405
Score = 129 (50.5 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 37/78 (47%), Positives = 45/78 (57%)
Query: 392 AAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRG 451
A Q GIV+IDE+DKI KK E DVS EGVQ+ LL ++EG+ V+ KH G
Sbjct: 247 AVEQNGIVFIDEIDKICKKGEYSGA--DVSREGVQRDLLPLVEGSTVST------KH--G 296
Query: 452 DNIQIDTKDILFICGGAF 469
+ T ILFI GAF
Sbjct: 297 ---MVKTDHILFIASGAF 311
Score = 77 (32.2 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI 300
TP+EI LD+ +IGQ AK+ +++A+ N + R+
Sbjct: 5 TPREIVSELDQHIIGQADAKRAVAIALRNRWRRM 38
>DICTYBASE|DDB_G0288593 [details] [associations]
symbol:DDB_G0288593 "ATP-dependent hsl protease
ATP-binding subunit hslU" species:44689 "Dictyostelium discoideum"
[GO:0070011 "peptidase activity, acting on L-amino acid peptides"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
dictyBase:DDB_G0288593 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AAFI02000117 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:XP_636662.1
ProteinModelPortal:Q54IQ2 SMR:Q54IQ2 STRING:Q54IQ2
EnsemblProtists:DDB0188012 GeneID:8626708 KEGG:ddi:DDB_G0288593
InParanoid:Q54IQ2 OMA:IAFEANA Uniprot:Q54IQ2
Length = 694
Score = 162 (62.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 40/112 (35%), Positives = 65/112 (58%)
Query: 332 NILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNV 391
NIL++GPTG GKT LA+ LA+ +N PFV +AT T+ G+ G DV++I+ L+ S N+
Sbjct: 316 NILMIGPTGVGKTELARRLAKIINAPFVKVEATKYTEVGFHGPDVDTIIRDLIEASISNI 375
Query: 392 AA--AQQGIVYID-EVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
A I+ +V+K + + + D+S +++ L K EG + +V
Sbjct: 376 KTKIANSHKASIEADVEK-NVISSLIGLQNDLSAITIEELLKKYREGQLDSV 426
Score = 138 (53.6 bits), Expect = 9.9e-20, Sum P(3) = 9.9e-20
Identities = 52/152 (34%), Positives = 77/152 (50%)
Query: 321 VDDDTVELEKSNILLMGPTGSG-KTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
+D +E+E S+ G G +AK L+ P I T + +A + E
Sbjct: 423 LDSVEIEIEVSSDS-KGSLGQAYDENIAKLLSAIDKQPSKIKKVT-IAEAKEIFEKQYRD 480
Query: 380 LYKLLT-VSDYNVAAAQQ-GIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
LY + V+ + +A+Q GIV++DE+DKI ES+ D S +GVQ+ LL ++EG +
Sbjct: 481 LYTVSQDVTKLAIQSAEQNGIVFLDEIDKICTSRESIKNGGDASTDGVQRDLLPIVEGCM 540
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAF 469
V+ K+ G QIDT ILFI GAF
Sbjct: 541 VST------KY--G---QIDTSRILFIASGAF 561
Score = 137 (53.3 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ S + SDLI+ E GR P+ V L L + ++LTEPKN +Q + +
Sbjct: 556 IASGAFHNTKPSDLIS-----ELQGRLPIRVELKPLEQKDFYKILTEPKNNQIQQQKALL 610
Query: 565 QMNGVKLHFTENALRLIAKKAIS-----KNTGARGLRSLLENILMDAMY 608
+ ++L FT++AL +AK A +N GAR L ++E I+ D +
Sbjct: 611 KTEDIQLEFTDDALLEVAKIAFEANAQVQNLGARRLHGIIERIVEDISF 659
Score = 90 (36.7 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK 307
P++I GLD++VIGQ AK+ +S+A+ N + R ++S K
Sbjct: 270 PRDIVSGLDEYVIGQSDAKRAISIALRNRWRRKRLDASMK 309
Score = 38 (18.4 bits), Expect = 4.8e-17, Sum P(3) = 4.8e-17
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 316 CT-TDGVDDDTVELEKSNIL 334
C+ T+G D D +E + SN L
Sbjct: 38 CSITNGKDKDDIENDDSNPL 57
Score = 37 (18.1 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 534 LVSLLALTENQLVQV-LTEPKNALGKQYRKMFQMN 567
L+S + +++ +V + E K KQYR ++ ++
Sbjct: 451 LLSAIDKQPSKIKKVTIAEAKEIFEKQYRDLYTVS 485
>TIGR_CMR|APH_1074 [details] [associations]
symbol:APH_1074 "ATP-dependent Hsl protease, ATP-binding
subunit HslU" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0006508
GO:GO:0016887 EMBL:CP000235 GenomeReviews:CP000235_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_505627.1 ProteinModelPortal:Q2GJ24
SMR:Q2GJ24 STRING:Q2GJ24 GeneID:3931122 KEGG:aph:APH_1074
PATRIC:20950902 BioCyc:APHA212042:GHPM-1080-MONOMER Uniprot:Q2GJ24
Length = 437
Score = 163 (62.4 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 36/91 (39%), Positives = 56/91 (61%)
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIA 582
L+PE GR P+ V L L+ + LV++LTEP+ L KQYR + + GV + FTE+ + IA
Sbjct: 312 LLPELQGRLPIRVELQPLSRDDLVRILTEPEANLLKQYRALLETEGVTVEFTEDGIFAIA 371
Query: 583 KKAIS-----KNTGARGLRSLLENILMDAMY 608
+ A + +N GAR L +++E ++ D Y
Sbjct: 372 EIASTVNREVENIGARRLHTIMEKLMEDISY 402
Score = 138 (53.6 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
E+ NIL++G TG GKT +A+ LA+ PF+ +AT T+ GYVG DV+SI+ L+
Sbjct: 47 EIIPKNILMIGHTGVGKTEIARRLAKLAQAPFIKVEATKFTEIGYVGRDVDSIMRDLV 104
Score = 118 (46.6 bits), Expect = 5.5e-20, Sum P(3) = 5.5e-20
Identities = 36/109 (33%), Positives = 60/109 (55%)
Query: 363 ATTLTQAGYV--GEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDV 420
+TT+ +A + E+ E ++ + V + A+ +GIV++DE+DKI + E + +V
Sbjct: 210 STTVKEAREILLDEETEKLIDEDKIVREALHIASNEGIVFLDEIDKIAARTE---VRGEV 266
Query: 421 SGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 469
+ EGVQ+ LL +LEGT V+ + G + T +LFI GAF
Sbjct: 267 NREGVQRDLLPLLEGTSVST-KYGT----------VTTDHVLFIASGAF 304
Score = 75 (31.5 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMR 299
+PK+I K LD+F++GQ AK+ ++ A+ + + R
Sbjct: 5 SPKQITKELDRFIVGQTEAKRAVANALRSRWRR 37
>TIGR_CMR|ECH_0997 [details] [associations]
symbol:ECH_0997 "heat shock protein HslVU, ATPase subunit
HslU" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_507784.1 ProteinModelPortal:Q2GFJ9
SMR:Q2GFJ9 STRING:Q2GFJ9 GeneID:3927521 KEGG:ech:ECH_0997
PATRIC:20577368 BioCyc:ECHA205920:GJNR-1000-MONOMER Uniprot:Q2GFJ9
Length = 487
Score = 153 (58.9 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 33/91 (36%), Positives = 56/91 (61%)
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGVKLHFTENALRLIA 582
L+PE GR P+ V L L+++ LV++LTEP+++L KQY + + + + FT+ + IA
Sbjct: 362 LLPELQGRLPIRVELKPLSKDDLVRILTEPESSLLKQYCALMKTENITIDFTDEGVSTIA 421
Query: 583 KKAIS-----KNTGARGLRSLLENILMDAMY 608
+ A + +N GAR L ++LE ++ D Y
Sbjct: 422 EIASTVNREVENIGARRLHTILEKLMEDISY 452
Score = 142 (55.0 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
E+ NIL++G TG GKT +A+ LA+ PF+ +AT T+ GYVG DV+SI+ L+ V
Sbjct: 98 EIIPKNILMIGHTGIGKTEIARRLAKLAKAPFIKVEATKFTEIGYVGRDVDSIIRDLVDV 157
Query: 387 S 387
+
Sbjct: 158 A 158
Score = 123 (48.4 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 37/98 (37%), Positives = 54/98 (55%)
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
+ E+ E ++ + + D + A+ GIV++DE+DKI + E I +V+ EGVQ+ LL
Sbjct: 271 INEESEKLMDEDKIIKDALLLASNDGIVFLDEIDKIAARTE---IRGEVNREGVQRDLLP 327
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 469
+LEGT V K+ G I T ILFI GAF
Sbjct: 328 LLEGTSVTT------KY--GT---ITTDHILFIASGAF 354
Score = 81 (33.6 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMR 299
TP++I + LD+F+IGQ AK+ +++A+ N + R
Sbjct: 56 TPQQITQELDRFIIGQADAKRAVAIALRNRWRR 88
>TIGR_CMR|CHY_2164 [details] [associations]
symbol:CHY_2164 "ATPase, AAA family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0019538 "protein metabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
KEGG:chy:CHY_2164 PATRIC:21277395
BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
Length = 411
Score = 148 (57.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 332 NILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNV 391
NI+L GP G+GKT A+T+A+ +PF + +A+ + +G + E L +L N
Sbjct: 195 NIILYGPPGNGKTNFARTVAQAYGLPFFVVNASAIISSGQLVGAAEKTLLELFA----NA 250
Query: 392 AAAQQGIVYIDEVDKITKK--AESLNISRDV 420
A + I++ DE+D I KK AE+LN + D+
Sbjct: 251 KALRPAIIFFDEIDAIAKKRRAETLNSASDI 281
>UNIPROTKB|I3LI39 [details] [associations]
symbol:I3LI39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00570000078874
Ensembl:ENSSSCT00000029727 OMA:QARECAP Uniprot:I3LI39
Length = 160
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L V+
Sbjct: 50 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVA----R 103
Query: 393 AAQQGIVYIDEVDKITKK 410
Q I++IDEVD + ++
Sbjct: 104 ELQPSIIFIDEVDSLLRE 121
>UNIPROTKB|H0YM48 [details] [associations]
symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR004487 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 EMBL:AC068213 PANTHER:PTHR11262:SF4 HGNC:HGNC:2088
EMBL:AC013553 ProteinModelPortal:H0YM48 SMR:H0YM48
Ensembl:ENST00000559152 Bgee:H0YM48 Uniprot:H0YM48
Length = 268
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN 302
P PK+I LDK+V+GQ AKKVLSVAVYNHY RIYN
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYN 203
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/100 (41%), Positives = 54/100 (54%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
ILL GP+G GKTLLAK +A + VP AT +T +G GE E+ + L + N
Sbjct: 253 ILLHGPSGCGKTLLAKAIAGELKVPLFAISATEIT-SGVSGES-EARVRTLFS----NAI 306
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 432
A I++IDE+D I K ES S+D+ V Q L M
Sbjct: 307 AQAPCIIFIDEIDAIAPKRESA--SKDMERRIVSQLLTCM 344
>FB|FBgn0031519 [details] [associations]
symbol:CG3326 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0036078 "minus-end specific microtubule depolymerization"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IMP] [GO:0005694 "chromosome" evidence=IDA] [GO:0051013
"microtubule severing" evidence=IMP] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0000091 "mitotic anaphase
A" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005813 GO:GO:0005694 EMBL:AE014134
GO:GO:0000287 GO:GO:0000070 eggNOG:COG0464 GO:GO:0008568
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 HSSP:P43773
GeneTree:ENSGT00570000078874 EMBL:AY058790 RefSeq:NP_608763.2
ProteinModelPortal:Q9VQN8 SMR:Q9VQN8 PaxDb:Q9VQN8 PRIDE:Q9VQN8
EnsemblMetazoa:FBtr0077603 EnsemblMetazoa:FBtr0331372 GeneID:33544
KEGG:dme:Dmel_CG3326 UCSC:CG3326-RA FlyBase:FBgn0031519
InParanoid:Q9VQN8 OMA:AWNEIYG OrthoDB:EOG41RN95 PhylomeDB:Q9VQN8
GenomeRNAi:33544 NextBio:784133 Bgee:Q9VQN8 GO:GO:0036078
GO:GO:0000091 Uniprot:Q9VQN8
Length = 523
Score = 128 (50.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 38/107 (35%), Positives = 57/107 (53%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKTL+AK++A F + ++LT +VG D E ++ L V+ A
Sbjct: 286 VLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSK-WVG-DAEKLVKTLFAVA----A 339
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
A Q I++IDEVD + K S N + S ++ L L+G N
Sbjct: 340 AHQPAIIFIDEVDSLLSK-RSAN--ENESTLRLKNEFLIHLDGAASN 383
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 43/150 (28%), Positives = 65/150 (43%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+L+ GP G GKT+LAK +A + F+ + Q Y+GE + + ++ N
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGD 452
A I++IDE+D I K D + + LL ++G NV K R D
Sbjct: 260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 453 NIQIDTKDILFICGGAFV-DIEKTISERRQ 481
T D +C G IE + +RRQ
Sbjct: 316 -----TLDPALLCPGRLDRKIEFPLPDRRQ 340
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+L+ GP G GKT+LAKT+A ++ F+ + Y+GE I++ + + N
Sbjct: 151 VLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHK-YLGEGPR-IIWDVFHLDKENAP 208
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGD 452
A I++IDE+D I K D + + LL ++G N+ K R D
Sbjct: 209 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNISVKAIMATNRKD 264
Query: 453 NI 454
+
Sbjct: 265 TL 266
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 121 (47.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 32/108 (29%), Positives = 58/108 (53%)
Query: 329 EKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSD 388
+ ILL GP G+GKTLLA+ +A + + F+ + L Q Y+GE ++ +L ++
Sbjct: 178 QPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 235
Query: 389 YNVAAAQQGIVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 435
+ + I+++DE+D I + +++S S D + LL L+G
Sbjct: 236 EHAPS----IIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDG 279
Score = 44 (20.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 563 MFQMNGVKLHFTENALRLIAKKAISK-NTGARGLRSLLE 600
MF + ++H T+ L K ++K ++G L+ L +
Sbjct: 365 MFALRERRVHVTQEDFELAVAKVLNKGDSGEMSLQKLFK 403
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKT+LAK +A + + F+ + Q Y+GE ++ + ++ N
Sbjct: 187 VLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQK-YLGEGPR-LVRDVFRLARENSP 244
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGD 452
A I++IDE+D I K D + + LL ++G V+V K R D
Sbjct: 245 A----IIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQD 300
Query: 453 NI 454
+
Sbjct: 301 TL 302
>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
symbol:spast "spastin" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IMP]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
Length = 570
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKT+LAK +A N F A TLT YVGE E ++ L V+
Sbjct: 331 LLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSK-YVGEG-EKLVRALFAVA----R 384
Query: 393 AAQQGIVYIDEVDKI 407
Q I++IDE+D +
Sbjct: 385 ELQPSIIFIDEIDSL 399
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 124 (48.7 bits), Expect = 0.00051, P = 0.00051
Identities = 45/139 (32%), Positives = 67/139 (48%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL+GP GSGKT+LA+ +A NVP++ + YVG+ + I + L +VA
Sbjct: 185 VLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI-YVGQGAKRI--RQLFAHARSVA 241
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPR-- 450
+ IV+IDE+D I K S V+G G Q+ + L +V + H
Sbjct: 242 PS---IVFIDEIDAIGGKRSS----GSVNGAG-QREHDQTLNQLLVEMDGFSNTVHIMVI 293
Query: 451 GDNIQIDTKDILFICGGAF 469
G +IDT D + G F
Sbjct: 294 GATNRIDTLDSALLRPGRF 312
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 124 (48.7 bits), Expect = 0.00051, P = 0.00051
Identities = 45/139 (32%), Positives = 67/139 (48%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL+GP GSGKT+LA+ +A NVP++ + YVG+ + I + L +VA
Sbjct: 185 VLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI-YVGQGAKRI--RQLFAHARSVA 241
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPR-- 450
+ IV+IDE+D I K S V+G G Q+ + L +V + H
Sbjct: 242 PS---IVFIDEIDAIGGKRSS----GSVNGAG-QREHDQTLNQLLVEMDGFSNTVHIMVI 293
Query: 451 GDNIQIDTKDILFICGGAF 469
G +IDT D + G F
Sbjct: 294 GATNRIDTLDSALLRPGRF 312
>UNIPROTKB|B7PXE3 [details] [associations]
symbol:spas "Spastin" species:6945 "Ixodes scapularis"
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
GO:GO:0005815 Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0051013 GO:GO:0005874 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA EMBL:DS813618
RefSeq:XP_002400359.1 EnsemblMetazoa:ISCW020482-RA GeneID:8032764
KEGG:isc:IscW_ISCW020482 VectorBase:ISCW020482 CTD:8032764
PhylomeDB:B7PXE3 Uniprot:B7PXE3
Length = 648
Score = 121 (47.7 bits), Expect = 0.00073, P = 0.00073
Identities = 37/109 (33%), Positives = 54/109 (49%)
Query: 300 IYNESSQKRSAGESSSCTTDGVDDDT-VELEKSNILLMGPTGSGKTLLAKTLARYVNVPF 358
I + K++ E TD + T + +LL GP G+GKT+LAK +A N F
Sbjct: 376 IAGQEVAKQALSEMVILPTDRPELFTGLRAPPKGLLLFGPPGNGKTMLAKAVAHESNSTF 435
Query: 359 VIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKI 407
+ A +LT YVGE E ++ L V+ Q I++IDEVD +
Sbjct: 436 LNISAASLTSK-YVGEG-EKLVRALFAVA----RELQPSIIFIDEVDSL 478
>UNIPROTKB|Q7QBW0 [details] [associations]
symbol:spas "Spastin" species:7165 "Anopheles gambiae"
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005815 Pfam:PF04212
eggNOG:COG0464 GO:GO:0008017 HSSP:O75351 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 EMBL:AAAB01008859
RefSeq:XP_312634.5 GeneID:1273633 KEGG:aga:AgaP_AGAP002334
VectorBase:AGAP002334 CTD:1273633 KO:K13254 OrthoDB:EOG44XGXW
PhylomeDB:Q7QBW0 HAMAP:MF_03021 Uniprot:Q7QBW0
Length = 827
Score = 122 (48.0 bits), Expect = 0.00078, P = 0.00078
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKTLLA+ +A + F A TLT YVG D E ++ L V+
Sbjct: 588 LLLFGPPGNGKTLLARAVATECSATFFSISAATLTSK-YVG-DGEKLVRALFAVA----R 641
Query: 393 AAQQGIVYIDEVDKITKKAES 413
Q I++IDEVD + + S
Sbjct: 642 ELQPSIIFIDEVDSVLSERSS 662
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 122 (48.0 bits), Expect = 0.00081, P = 0.00081
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKTLLAK +A +PF A+ T + +VG V + K L S + A
Sbjct: 352 VLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEM-FVG--VAASRVKDLFASSRSYA 408
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ--QALLKML 433
+ I++IDE+D I K D+ G G + Q LL++L
Sbjct: 409 PS---IIFIDEIDAIGSKRGG----PDIGGGGAEREQGLLQIL 444
>UNIPROTKB|Q6AZT2 [details] [associations]
symbol:spast "Spastin" species:8355 "Xenopus laevis"
[GO:0001578 "microtubule bundle formation" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
GO:GO:0048487 GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
EMBL:BC077358 RefSeq:NP_001086725.1 UniGene:Xl.32426
ProteinModelPortal:Q6AZT2 SMR:Q6AZT2 GeneID:446560 KEGG:xla:446560
Xenbase:XB-GENE-947846 Uniprot:Q6AZT2
Length = 600
Score = 120 (47.3 bits), Expect = 0.00084, P = 0.00084
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L +V+
Sbjct: 362 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFSVA----R 415
Query: 393 AAQQGIVYIDEVDKI 407
Q I++IDEVD +
Sbjct: 416 ELQPSIIFIDEVDSL 430
>UNIPROTKB|Q05AS3 [details] [associations]
symbol:spast "Spastin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0051260 GO:GO:0005815 GO:GO:0007049
Pfam:PF04212 eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:CR760974
EMBL:BC123973 RefSeq:NP_001016453.1 UniGene:Str.10574
ProteinModelPortal:Q05AS3 SMR:Q05AS3 STRING:Q05AS3
Ensembl:ENSXETT00000057121 GeneID:549207 KEGG:xtr:549207
Xenbase:XB-GENE-947839 Bgee:Q05AS3 Uniprot:Q05AS3
Length = 603
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L +V+
Sbjct: 365 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFSVA----R 418
Query: 393 AAQQGIVYIDEVDKI 407
Q I++IDEVD +
Sbjct: 419 ELQPSIIFIDEVDSL 433
>UNIPROTKB|B4K799 [details] [associations]
symbol:spas "Spastin" species:7230 "Drosophila mojavensis"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 EMBL:CH933806 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001998762.1
EnsemblMetazoa:FBtr0174870 GeneID:6572656 KEGG:dmo:Dmoj_GI24145
FlyBase:FBgn0146868 InParanoid:B4K799 Uniprot:B4K799
Length = 765
Score = 121 (47.7 bits), Expect = 0.00090, P = 0.00090
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
GS G+ TP KG+++ ++ Q +++ + I + K++ E
Sbjct: 451 GSGSGSGASTPMISVKGVEQKLV-QLIMDEIVEGGAKVEWTDIAGQDVAKQALQEMVILP 509
Query: 318 TDGVDDDT-VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
+ + T + +LL GP G+GKTLLA+ +A + F+ A +LT YVG D
Sbjct: 510 SVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DG 567
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAES 413
E ++ L V+ + Q I++IDEVD + + S
Sbjct: 568 EKLVRALFAVARH----LQPSIIFIDEVDSLLSERSS 600
>DICTYBASE|DDB_G0287165 [details] [associations]
symbol:DDB_G0287165 "spastin-like protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0287165 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
Pfam:PF04212 eggNOG:COG0464 HSSP:O75351 GO:GO:0008568 GO:GO:0005874
EMBL:AAFI02000098 KO:K13254 HAMAP:MF_03021 RefSeq:XP_637373.1
ProteinModelPortal:Q54KQ7 SMR:Q54KQ7 EnsemblProtists:DDB0231319
GeneID:8625995 KEGG:ddi:DDB_G0287165 InParanoid:Q54KQ7 OMA:TERSSNE
ProtClustDB:CLSZ2729356 Uniprot:Q54KQ7
Length = 655
Score = 120 (47.3 bits), Expect = 0.00095, P = 0.00095
Identities = 38/121 (31%), Positives = 61/121 (50%)
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
+LL GP G+GKT++AK +A V F +++LT YVG D E ++ L V+ +
Sbjct: 420 LLLFGPPGNGKTMIAKAVAYESKVTFFSISSSSLTSK-YVG-DGEKLVRALFAVATH--- 474
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK----GARKH 448
Q I++IDE+D + + S N S + ++ +L +G N E+ GA
Sbjct: 475 -FQPSIIFIDEIDSLLTERSS-NESE--ASRRLKTEILVQFDGARTNGDERVLVMGATNR 530
Query: 449 P 449
P
Sbjct: 531 P 531
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 329 EKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSD 388
+ +LL GP G+GKTLLA+ +A + + F+ + L Q Y+GE + + +
Sbjct: 178 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFIMARE 236
Query: 389 YNVAAAQQGIVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 435
+ I+++DE+D I + + ES + D + LL L+G
Sbjct: 237 H-----APSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDG 279
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 684 617 0.00089 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 68
No. of states in DFA: 617 (66 KB)
Total size of DFA: 306 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.56u 0.17s 48.73t Elapsed: 00:00:02
Total cpu time: 48.57u 0.17s 48.74t Elapsed: 00:00:02
Start: Tue May 21 18:08:17 2013 End: Tue May 21 18:08:19 2013