Query 005674
Match_columns 684
No_of_seqs 29 out of 31
Neff 2.8
Searched_HMMs 29240
Date Mon Mar 25 04:15:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005674.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005674hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3na7_A HP0958; flagellar bioge 94.6 2.2 7.6E-05 41.7 18.1 19 462-480 199-217 (256)
2 2dfs_A Myosin-5A; myosin-V, in 88.3 5.4 0.00019 46.9 14.5 79 366-444 976-1054(1080)
3 2bnx_A Diaphanous protein homo 87.8 5 0.00017 41.6 12.5 56 140-197 92-149 (386)
4 2eqb_B RAB guanine nucleotide 87.2 2.4 8.1E-05 37.8 8.3 53 358-410 10-74 (97)
5 1i84_S Smooth muscle myosin he 83.4 2.4 8.4E-05 49.6 8.5 41 358-398 911-951 (1184)
6 1ic2_A Tropomyosin alpha chain 79.3 5 0.00017 33.5 6.8 42 357-398 38-79 (81)
7 1i84_S Smooth muscle myosin he 78.1 2.2 7.4E-05 50.1 5.7 29 127-155 682-715 (1184)
8 2v71_A Nuclear distribution pr 76.9 58 0.002 31.8 15.8 110 352-494 41-150 (189)
9 3oja_B Anopheles plasmodium-re 74.9 26 0.00087 36.8 12.2 23 226-248 454-476 (597)
10 3vkg_A Dynein heavy chain, cyt 74.5 80 0.0028 41.7 18.5 148 311-472 1942-2112(3245)
11 3ghg_A Fibrinogen alpha chain; 72.7 17 0.0006 40.4 10.5 113 285-428 50-164 (562)
12 3u1c_A Tropomyosin alpha-1 cha 68.4 40 0.0014 29.3 10.0 37 357-393 41-77 (101)
13 3u59_A Tropomyosin beta chain; 67.4 61 0.0021 28.0 10.9 43 357-399 41-83 (101)
14 2ocy_A RAB guanine nucleotide 64.9 14 0.00049 35.1 6.9 39 361-399 45-83 (154)
15 3na7_A HP0958; flagellar bioge 64.7 40 0.0014 32.9 10.4 19 229-247 12-30 (256)
16 3vkg_A Dynein heavy chain, cyt 64.3 3.7E+02 0.013 35.9 21.6 63 349-411 2038-2100(3245)
17 3ghg_C Fibrinogen gamma chain; 64.0 44 0.0015 36.0 11.2 80 307-386 38-117 (411)
18 3cve_A Homer protein homolog 1 59.7 41 0.0014 28.5 8.1 39 381-419 21-59 (72)
19 3oja_B Anopheles plasmodium-re 59.0 38 0.0013 35.6 9.6 59 364-422 527-585 (597)
20 2e7s_A RAB guanine nucleotide 58.2 12 0.0004 35.1 5.0 54 351-405 24-89 (135)
21 3cvf_A Homer-3, homer protein 56.3 27 0.00091 30.1 6.5 41 379-419 25-65 (79)
22 2dfs_A Myosin-5A; myosin-V, in 53.9 43 0.0015 39.5 9.8 58 352-413 952-1009(1080)
23 2f31_A Diaphanous protein homo 53.5 14 0.00048 35.4 4.9 56 140-197 88-145 (233)
24 2q12_A DIP13 alpha, DCC-intera 52.1 1.7E+02 0.0057 28.1 13.2 206 360-580 21-242 (265)
25 4h8s_A DCC-interacting protein 51.0 2.1E+02 0.007 29.2 13.2 199 361-580 45-265 (407)
26 4dci_A Uncharacterized protein 49.3 84 0.0029 29.7 9.2 61 353-413 29-102 (150)
27 2wuj_A Septum site-determining 48.5 13 0.00046 29.5 3.2 43 341-383 15-57 (57)
28 1l8d_A DNA double-strand break 46.9 1.3E+02 0.0045 25.4 9.9 34 364-397 7-40 (112)
29 1m1j_B Fibrinogen beta chain; 45.6 1.8E+02 0.0062 31.7 12.4 58 309-391 102-159 (464)
30 1jnm_A Proto-oncogene C-JUN; B 38.7 55 0.0019 26.0 5.4 50 325-381 1-50 (62)
31 3mq9_A Bone marrow stromal ant 38.4 2.8E+02 0.0095 28.5 12.0 36 358-393 434-469 (471)
32 3q8t_A Beclin-1; autophagy, AT 37.7 1.2E+02 0.0041 26.3 7.8 32 351-382 16-47 (96)
33 3oja_A Leucine-rich immune mol 37.3 2E+02 0.0069 29.6 10.8 47 351-397 433-479 (487)
34 1t3j_A Mitofusin 1; coiled coi 37.2 1.1E+02 0.0038 27.2 7.5 39 348-386 42-80 (96)
35 2k48_A Nucleoprotein; viral pr 35.8 86 0.0029 28.5 6.7 55 370-424 38-100 (107)
36 3fpp_A Macrolide-specific effl 33.3 70 0.0024 31.2 6.3 25 362-386 71-95 (341)
37 4etp_A Kinesin-like protein KA 33.2 1E+02 0.0035 32.4 7.9 44 357-400 7-50 (403)
38 1zym_A Enzyme I; phosphotransf 31.8 1.2E+02 0.0042 30.1 7.8 31 428-458 69-99 (258)
39 3mq9_A Bone marrow stromal ant 31.3 84 0.0029 32.3 6.8 22 357-378 447-468 (471)
40 4fi5_A Nucleoprotein; structur 30.7 1.1E+02 0.0039 27.9 6.7 57 369-425 24-88 (113)
41 3eg5_B Protein diaphanous homo 30.4 62 0.0021 33.6 5.6 56 140-197 154-211 (383)
42 2ic9_A Nucleocapsid protein; h 30.3 1.2E+02 0.0042 27.0 6.7 57 369-425 7-71 (96)
43 2ic6_A Nucleocapsid protein; h 29.6 1.4E+02 0.0048 25.8 6.7 55 370-424 8-70 (78)
44 2lw1_A ABC transporter ATP-bin 28.1 1.3E+02 0.0045 25.2 6.3 24 361-384 23-46 (89)
45 3etv_A Protein transport prote 27.5 3.7E+02 0.013 28.7 10.8 61 357-427 13-73 (355)
46 1c1g_A Tropomyosin; contractIl 27.3 3.3E+02 0.011 24.1 28.5 251 226-500 11-284 (284)
47 3hnw_A Uncharacterized protein 26.8 3.2E+02 0.011 25.1 9.1 35 362-396 77-111 (138)
48 3q8t_A Beclin-1; autophagy, AT 26.8 2E+02 0.0069 24.9 7.4 47 356-402 7-53 (96)
49 2efl_A Formin-binding protein 25.5 4.4E+02 0.015 25.0 23.0 64 434-497 194-257 (305)
50 2js5_A Uncharacterized protein 25.0 67 0.0023 27.3 3.9 28 369-396 5-32 (71)
51 3csx_A Putative uncharacterize 24.5 60 0.002 28.2 3.5 28 369-396 17-44 (81)
52 3ol1_A Vimentin; structural ge 24.1 3.8E+02 0.013 23.8 10.5 35 358-392 18-52 (119)
53 3tnu_B Keratin, type II cytosk 24.1 3.8E+02 0.013 23.8 9.3 25 357-381 47-71 (129)
54 2b5u_A Colicin E3; high resolu 23.7 8.2E+02 0.028 27.5 13.8 38 441-488 393-430 (551)
55 1ci6_A Transcription factor AT 23.7 1.2E+02 0.0043 24.3 5.1 41 335-379 9-49 (63)
56 3tnu_A Keratin, type I cytoske 23.2 3E+02 0.01 24.6 8.0 25 357-381 49-73 (131)
57 1gk4_A Vimentin; intermediate 23.2 2E+02 0.0068 24.1 6.5 26 360-385 1-26 (84)
58 2gd5_A Charged multivesicular 23.0 3E+02 0.01 25.5 8.4 38 349-386 10-47 (179)
59 2ion_A PDCD4, programmed cell 22.0 2E+02 0.007 26.3 6.9 37 139-181 39-75 (152)
60 1dh3_A Transcription factor CR 21.7 1.3E+02 0.0044 23.8 4.7 46 327-379 3-48 (55)
61 1cii_A Colicin IA; bacteriocin 21.7 7.2E+02 0.024 27.9 11.9 41 359-399 362-402 (602)
62 3mv2_A Coatomer subunit alpha; 20.7 43 0.0015 35.1 2.3 50 16-65 20-69 (325)
63 3tnu_B Keratin, type II cytosk 20.6 2.2E+02 0.0076 25.3 6.6 33 360-392 36-68 (129)
64 1x8y_A Lamin A/C; structural p 20.5 1.4E+02 0.0049 25.2 5.1 26 360-385 3-28 (86)
65 4gyt_A Uncharacterized protein 20.5 5.2E+02 0.018 24.0 11.4 144 149-305 32-194 (194)
66 2nsz_A Programmed cell death p 20.4 2.5E+02 0.0084 24.8 6.9 37 139-181 37-73 (129)
No 1
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=94.60 E-value=2.2 Score=41.72 Aligned_cols=19 Identities=11% Similarity=0.127 Sum_probs=14.7
Q ss_pred HhhHHHHHHHHHHHHHHHH
Q 005674 462 VKHEDYFVNLAISLLSAYK 480 (684)
Q Consensus 462 er~~d~Fv~La~~~Ls~~k 480 (684)
.+|+-||+.|--+.+..-+
T Consensus 199 ~~C~GC~~~lppq~~~~i~ 217 (256)
T 3na7_A 199 QACGGCFIRLNDKIYTEVL 217 (256)
T ss_dssp TBCTTTCCBCCHHHHHHHH
T ss_pred CccCCCCeeeCHHHHHHHH
Confidence 4899999998777766554
No 2
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=88.27 E-value=5.4 Score=46.90 Aligned_cols=79 Identities=14% Similarity=0.156 Sum_probs=54.3
Q ss_pred HHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHHHHhhhhhcchhhHHHHHHhhchhhh
Q 005674 366 VKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELLKSIAACRVESDVLSTWINFLEDSWV 444 (684)
Q Consensus 366 ekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELskSIasc~vEA~vv~tWInFLEdTW~ 444 (684)
+++..+++++++.+...++..+..+..+..|.+..++...+.-..|+.|...|.+..+.-+-..+-+..||-=.+..|.
T Consensus 976 ~~e~~~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~~~~~~~~~~~~ 1054 (1080)
T 2dfs_A 976 EEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEIT 1054 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555555666666677777778888888888888888888888888887777766666666666655544443
No 3
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=87.78 E-value=5 Score=41.61 Aligned_cols=56 Identities=7% Similarity=0.234 Sum_probs=42.1
Q ss_pred hhhhhhhhhhhhhhHHHhhccCCChhHHHHHHHHHh-hhccCchh-HHHHHHHhHHHHHH
Q 005674 140 FRDVFLQSQALEAITVSMILEAPNEEEISLLLEMFG-LCLTGGKE-VHHAITSSIQDLAT 197 (684)
Q Consensus 140 FrdVFL~SqALEgI~lSmIleaP~eEEvsLLlEiFg-lCL~Ggke-vH~aivssiqdLA~ 197 (684)
+..|+-+.+++-.|+.| |-+|+..=+.+.+|+++ +|+.+|.+ +|..|++++..++.
T Consensus 92 l~~vl~~~~~i~~l~~s--L~s~~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~ 149 (386)
T 2bnx_A 92 IKTMLETEEGILLLVRA--MDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAE 149 (386)
T ss_dssp HHHHHHSSSHHHHHHHT--CCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHH--hCCCCchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHH
Confidence 34456666677655555 57888988889999876 99987644 69999999998754
No 4
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=87.23 E-value=2.4 Score=37.81 Aligned_cols=53 Identities=23% Similarity=0.414 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH------------hhHHHHHHHHH
Q 005674 358 IGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQ------------FDEANDQIVEH 410 (684)
Q Consensus 358 l~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQ------------FdEA~nqiv~h 410 (684)
+-.+|..|+.+....+++++++...|.-.+.+...+..++.+ |+|||+-....
T Consensus 10 lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~a 74 (97)
T 2eqb_B 10 LKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADA 74 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556788888888888888888888888888888888777765 88888765543
No 5
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=83.44 E-value=2.4 Score=49.61 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 005674 358 IGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEERE 398 (684)
Q Consensus 358 l~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERd 398 (684)
+..++..|++++.+|+.+++.++..|.....++..+.++..
T Consensus 911 ~e~~l~~l~~~~~~Le~~l~ele~elee~ee~l~el~~e~~ 951 (1184)
T 1i84_S 911 AEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKK 951 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555555555555555444444444444333
No 6
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=79.29 E-value=5 Score=33.54 Aligned_cols=42 Identities=31% Similarity=0.342 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 005674 357 EIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEERE 398 (684)
Q Consensus 357 El~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERd 398 (684)
.+-.||..|.+..-.||.+|-+++..|..|+..|..++..++
T Consensus 38 ~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLeeaek~~~ 79 (81)
T 1ic2_A 38 QLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADKKAT 79 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456889999999999999999999999999999887765443
No 7
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=78.05 E-value=2.2 Score=50.05 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=15.0
Q ss_pred EEeecCCCCCCcchhhhhhhhh-----hhhhhHH
Q 005674 127 LYYDADFGGEPLNFRDVFLQSQ-----ALEAITV 155 (684)
Q Consensus 127 lyyD~d~ggePmnFrdVFL~Sq-----ALEgI~l 155 (684)
--+=|.....|..|-......| -||+|-+
T Consensus 682 RCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri 715 (1184)
T 1i84_S 682 RCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRI 715 (1184)
T ss_dssp CEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHH
T ss_pred eeeCCCCcCCCCcccHHHHHHHHhhcCchHHHHh
Confidence 3344555566666655544444 4555543
No 8
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=76.87 E-value=58 Score=31.81 Aligned_cols=110 Identities=20% Similarity=0.296 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHHHHhhhhhcchhh
Q 005674 352 SEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELLKSIAACRVESDV 431 (684)
Q Consensus 352 s~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELskSIasc~vEA~v 431 (684)
.++|.||-.||..++|+--+|...+.++..-+...+.++....-+ +++ -+..| ++|++ ..+.+-..
T Consensus 41 rELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e------~~~-~~~~L---q~el~----~l~~~~~~ 106 (189)
T 2v71_A 41 RELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQ------SYK-QVSVL---EDDLS----QTRAIKEQ 106 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHH-HHHHH---HHHHH----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHH-HHHHH---HHHHH----HHHHHHHH
Confidence 467777777777777777777777776666666666555443322 111 12222 23332 22222222
Q ss_pred HHHHHHhhchhhhHHHhHHHHHHhhhhHHHHhhHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q 005674 432 LSTWINFLEDSWVLQCSQMELKEKQVSEELVKHEDYFVNLAISLLSAYKKELGPSISRIGKFV 494 (684)
Q Consensus 432 v~tWInFLEdTW~LQss~~e~kekq~~dELer~~d~Fv~La~~~Ls~~keeL~psI~rI~~~V 494 (684)
++. -.+ +=.|.||+|||..-. ++.-|..+..-+...|.|+-.+=
T Consensus 107 l~~-------------~ir--eLEq~NDdlEr~~R~----~~~SleD~e~kln~aiEr~alLE 150 (189)
T 2v71_A 107 LHK-------------YVR--ELEQANDDLERAKRA----TIMSLEDFEQRLNQAIERNAFLE 150 (189)
T ss_dssp HHH-------------HHH--HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-------------HHH--HHHHHhhHHHHHHHH----HHhhHHHHHHHHHHHHHHHHHHH
Confidence 222 222 345889999988654 44455556666666666665443
No 9
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=74.92 E-value=26 Score=36.84 Aligned_cols=23 Identities=13% Similarity=0.317 Sum_probs=12.6
Q ss_pred ccchhhhhhHHHHHHHHHHhhhh
Q 005674 226 MNSDIERIDAEASDLKKRLEGMK 248 (684)
Q Consensus 226 ~nadi~riD~Ea~~L~~kl~~~~ 248 (684)
+.+++..++.++..|+++++.+.
T Consensus 454 l~~e~~~~~~~i~~l~~~~~~~~ 476 (597)
T 3oja_B 454 LEAEVNELRAEVQQLTNEQIQQE 476 (597)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666666655443
No 10
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=74.48 E-value=80 Score=41.71 Aligned_cols=148 Identities=12% Similarity=0.182 Sum_probs=72.8
Q ss_pred hHHHHHHhhhcchHHHhhhHhhhhhhhHHhhhhhhcccchhhHHHHHHHHHHHHHHHhhhHHHHHHH-------------
Q 005674 311 KLKVLSESLSNSSVKAEKRISDHRSQKEEALKVRVVKANESSEKEKEIGAEISELVKQRDHLEAELK------------- 377 (684)
Q Consensus 311 KLKvLseSLanSssKAEkRI~d~R~QKEeAL~fRv~K~nEvs~~EKEl~aEI~~LekqrdeLEAeLK------------- 377 (684)
+|.++---|...+..||+-+...-.++++|=.-+ .+|.+.|+++..+-.+..+.|++-|++|.
T Consensus 1942 ~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k----~~v~~~~~~~~~~~~ei~~~k~~~e~dL~~A~Pa~Pkr~~l~ 2017 (3245)
T 3vkg_A 1942 SLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQ----KDARELQVQLDVRNKEIAVQKVKAYADLEKAEPTGPLREEVE 2017 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHH
Confidence 3344445566677777776666655555554322 34555555555555555555555444333
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHHHHhhhhhcchhhH-------HHHHHhhch---hhhHHH
Q 005674 378 KVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELLKSIAACRVESDVL-------STWINFLED---SWVLQC 447 (684)
Q Consensus 378 kVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELskSIasc~vEA~vv-------~tWInFLEd---TW~LQs 447 (684)
+.+..|+.|.++|..++++=..-+ .-|..||.+-+++.+....|..|++.+ ..=|+=|.| .|.-|.
T Consensus 2018 ~ae~~l~~~~~~L~~~~~~L~~le----~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~ 2093 (3245)
T 3vkg_A 2018 QLENAANELKLKQDEIVATITALE----KSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQS 2093 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHHHHH
Confidence 334444444444444433332222 223444554444444444454444443 345667776 787665
Q ss_pred hHHHHHHhhhhHHHHhhHHHHHHHH
Q 005674 448 SQMELKEKQVSEELVKHEDYFVNLA 472 (684)
Q Consensus 448 s~~e~kekq~~dELer~~d~Fv~La 472 (684)
.--+..-+ .=.+|+++--+
T Consensus 2094 ~~l~~~~~------~L~GD~LLaaa 2112 (3245)
T 3vkg_A 2094 ENFNTQMS------TVVGDVVLASA 2112 (3245)
T ss_dssp HHHHHHHH------HHHHHHHHHHH
T ss_pred HHHHHHHH------hccHHHHHHHH
Confidence 43322111 12567766544
No 11
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=72.66 E-value=17 Score=40.42 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=81.0
Q ss_pred HHHHHHHh-hhhccCCCChhhhhhhhhhHHHHHHhhhcchHHHhhhHhhhhhhhHHhhhhhhcccchhhHHHHHHHHHHH
Q 005674 285 RLEGLLLK-KKLLSYGDSPEVHAQKVDKLKVLSESLSNSSVKAEKRISDHRSQKEEALKVRVVKANESSEKEKEIGAEIS 363 (684)
Q Consensus 285 rlE~LlLk-Kksl~~GDS~e~haqkVDKLKvLseSLanSssKAEkRI~d~R~QKEeAL~fRv~K~nEvs~~EKEl~aEI~ 363 (684)
||-+||+| .+.+. ..|.|||-.-+.+..+...++.-+ .++-|.|.-|.+..++.. ....||+
T Consensus 50 rLQglLdkqErDlt---------krINELKnqLEdlsKnsKdseqy~----k~~~E~Lr~rq~q~~dNd----NtynE~S 112 (562)
T 3ghg_A 50 RMKGLIDEVNQDFT---------NRINKLKNSLFEYQKNNKDSHSLT----TNIMEILRGDFSSANNRD----NTYNRVS 112 (562)
T ss_dssp HHHHHHHHHHHHHH---------HHHHHHHHHHTHHHHHHHHHHHHH----HHHHHTTSSHHHHHHHHH----HHHHHTT
T ss_pred chhhhHHhhcCcHH---------HHHHHHHHHHHHHHhhchhHHHHH----HHHHHHHHHHHHhhhccc----hhHHHHH
Confidence 56666655 45555 689999999999988888888876 566677766666555322 2667888
Q ss_pred -HHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHHHHhhhhhcc
Q 005674 364 -ELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELLKSIAACRVE 428 (684)
Q Consensus 364 -~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELskSIasc~vE 428 (684)
+|+++...|+.++.-+=..|.+-+..|.+.+.+ +|.=|-+..--|++|+-=
T Consensus 113 ~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~k--------------IQRLEvDIdiqirsCKgs 164 (562)
T 3ghg_A 113 EDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVD--------------MKRLEVDIDIKIRSCRGS 164 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHhcccc
Confidence 899999999887766556666666666655443 455577888889999853
No 12
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=68.38 E-value=40 Score=29.30 Aligned_cols=37 Identities=24% Similarity=0.185 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHH
Q 005674 357 EIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNA 393 (684)
Q Consensus 357 El~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~ 393 (684)
.+-.||..|.++.-.||.+|-+++..|..|...|..+
T Consensus 41 ~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ 77 (101)
T 3u1c_A 41 QLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFA 77 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3667888899999999999999999998888877766
No 13
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=67.36 E-value=61 Score=27.96 Aligned_cols=43 Identities=26% Similarity=0.319 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 005674 357 EIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQ 399 (684)
Q Consensus 357 El~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQ 399 (684)
.+..||..|.++.-.|+.+|.+++..|..|+..|..++..+..
T Consensus 41 ~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~ 83 (101)
T 3u59_A 41 QLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATD 83 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3667888899999999999999999999888888777555543
No 14
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=64.94 E-value=14 Score=35.08 Aligned_cols=39 Identities=18% Similarity=0.310 Sum_probs=21.4
Q ss_pred HHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 005674 361 EISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQ 399 (684)
Q Consensus 361 EI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQ 399 (684)
++..|+.++...+++++++...|+-.+++...+..++.+
T Consensus 45 ~~~~l~~~~~~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ 83 (154)
T 2ocy_A 45 DYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADK 83 (154)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555555555555555555555543
No 15
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=64.74 E-value=40 Score=32.89 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=12.8
Q ss_pred hhhhhhHHHHHHHHHHhhh
Q 005674 229 DIERIDAEASDLKKRLEGM 247 (684)
Q Consensus 229 di~riD~Ea~~L~~kl~~~ 247 (684)
++..||.++..|..++...
T Consensus 12 ~LQ~lD~~i~~l~~~~~~l 30 (256)
T 3na7_A 12 EISHLDKEIDSLEPLIREK 30 (256)
T ss_dssp HHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5566777777777766654
No 16
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=64.25 E-value=3.7e+02 Score=35.89 Aligned_cols=63 Identities=16% Similarity=0.298 Sum_probs=50.6
Q ss_pred chhhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Q 005674 349 NESSEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHL 411 (684)
Q Consensus 349 nEvs~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hL 411 (684)
.++.+.-.+|.++..++-+++..|++++..+...|..|..=+..+-.||....+..+++=..+
T Consensus 2038 ~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~~l~~~~ 2100 (3245)
T 3vkg_A 2038 TALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQM 2100 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHH
Confidence 445555556667777777888999999999999999999999999999999988877654433
No 17
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=63.98 E-value=44 Score=35.98 Aligned_cols=80 Identities=8% Similarity=0.079 Sum_probs=52.2
Q ss_pred hhhhhHHHHHHhhhcchHHHhhhHhhhhhhhHHhhhhhhcccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH
Q 005674 307 QKVDKLKVLSESLSNSSVKAEKRISDHRSQKEEALKVRVVKANESSEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAA 386 (684)
Q Consensus 307 qkVDKLKvLseSLanSssKAEkRI~d~R~QKEeAL~fRv~K~nEvs~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA 386 (684)
.-++-|+-+-++++|+|+.|+..|..-..-=..+.+-+-...+-+.+.=|.+..||..++......+.++..+...++..
T Consensus 38 ~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q~~~~~n~~~~~q~Skkml~~~~~~~~~~~~~~~~i~~l~~~~~~~ 117 (411)
T 3ghg_C 38 KDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRKMLEEIMKYEASILTHDSSIRYLQEIYNSN 117 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45778999999999999999999876533212222222222355666666778888888777766666666555554443
No 18
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=59.75 E-value=41 Score=28.53 Aligned_cols=39 Identities=28% Similarity=0.335 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHH
Q 005674 381 LSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELL 419 (684)
Q Consensus 381 ~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELs 419 (684)
-.+..+..+|...+.+|+++.....+++.-|-.|-+||+
T Consensus 21 ~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~ 59 (72)
T 3cve_A 21 GQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELT 59 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 334455566778888899998889999999999988876
No 19
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=59.03 E-value=38 Score=35.56 Aligned_cols=59 Identities=12% Similarity=0.132 Sum_probs=23.3
Q ss_pred HHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHHHHh
Q 005674 364 ELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELLKSI 422 (684)
Q Consensus 364 ~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELskSI 422 (684)
.++++.+++.++++++......-..++...++.....-+-++.+-.-+|..++++-+--
T Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~~~ 585 (597)
T 3oja_B 527 ARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNRNP 585 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33333333444444444444333333333333333333334444444555555554433
No 20
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=58.23 E-value=12 Score=35.09 Aligned_cols=54 Identities=22% Similarity=0.378 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH------------hhHHHH
Q 005674 351 SSEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQ------------FDEAND 405 (684)
Q Consensus 351 vs~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQ------------FdEA~n 405 (684)
+.+.|+ +-.+...|.+.......+++++...|+-.+++...+..++.+ |+|||+
T Consensus 24 ~~~le~-l~~~l~~l~~~l~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~LTasLFeEAN~ 89 (135)
T 2e7s_A 24 IENYNQ-LKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANN 89 (135)
T ss_dssp HHHHHH-HHHHHHHHHHHTTTHHHHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 21
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=56.29 E-value=27 Score=30.10 Aligned_cols=41 Identities=24% Similarity=0.232 Sum_probs=32.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHH
Q 005674 379 VNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELL 419 (684)
Q Consensus 379 VN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELs 419 (684)
++-.+..+..+|...+.+|+++.....+++.-|-.|-+||+
T Consensus 25 Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~ 65 (79)
T 3cvf_A 25 LEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELS 65 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 34445566667778888899998888999999999988876
No 22
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=53.95 E-value=43 Score=39.53 Aligned_cols=58 Identities=21% Similarity=0.198 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhh
Q 005674 352 SEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKT 413 (684)
Q Consensus 352 s~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~ 413 (684)
...++.+..|++.|+++.++|+...+..+ ++..++.++++|=+..++.........+.
T Consensus 952 ~~~~~~~~~e~~~L~~~l~~le~~~~e~~----~~~~~v~~L~~e~~~l~~~~~~~~ke~~~ 1009 (1080)
T 2dfs_A 952 NNLEITYSTETEKLRSDVERLRMSEEEAK----NATNRVLSLQEEIAKLRKELHQTQTEKKT 1009 (1080)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677888888888888877655544 44456666666655555554444443333
No 23
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=53.51 E-value=14 Score=35.38 Aligned_cols=56 Identities=7% Similarity=0.207 Sum_probs=43.9
Q ss_pred hhhhhhhhhhhhhhHHHhhccCCChhHHHHHHHHHh-hhccCchhH-HHHHHHhHHHHHH
Q 005674 140 FRDVFLQSQALEAITVSMILEAPNEEEISLLLEMFG-LCLTGGKEV-HHAITSSIQDLAT 197 (684)
Q Consensus 140 FrdVFL~SqALEgI~lSmIleaP~eEEvsLLlEiFg-lCL~Ggkev-H~aivssiqdLA~ 197 (684)
+..|+-+.+++..|+.| |-+|+..-+.+.+|+++ +|+.+|.+- |..|++++..++.
T Consensus 88 ~~~vl~~~~~i~~l~~~--L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~ 145 (233)
T 2f31_A 88 IKTMLETEEGILLLVRA--MDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAE 145 (233)
T ss_dssp HHHHHTSSSHHHHHHTT--CCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHH--hCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHH
Confidence 44566666777666665 47889999999999987 999987666 9999999998643
No 24
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=52.14 E-value=1.7e+02 Score=28.10 Aligned_cols=206 Identities=11% Similarity=0.125 Sum_probs=110.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHHHH-hhhhhcc---hhhHHHH
Q 005674 360 AEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELLKS-IAACRVE---SDVLSTW 435 (684)
Q Consensus 360 aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELskS-Iasc~vE---A~vv~tW 435 (684)
+-|..+|.+-+.|+..|+++-.......... ..|-.|.+++...|.. ++.. |..|.-+ ..++...
T Consensus 21 ~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~-------~~~~~a~~~f~~~L~~----~~~~~~~~~~~d~~~~~~L~~f 89 (265)
T 2q12_A 21 SLLGVFEEDATAISNYMNQLYQAMHRIYDAQ-------NELSAATHLTSKLLKE----YEKQRFPLGGDDEVMSSTLQQF 89 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHG----GGGSCCC-----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH----HHhhhccCCCCcHHHHHHHHHH
Confidence 3467777777788888887755544433333 2345566666666553 1110 0011111 2344555
Q ss_pred HHhhchhhhHHHhHHHHHHhhhhHHHHhhHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHhhhcccCCCccCCCCCCccc
Q 005674 436 INFLEDSWVLQCSQMELKEKQVSEELVKHEDYFVNLAISLLSAYKKELGPSISRIGKFVENLKNLSEGSENASSGDDEHS 515 (684)
Q Consensus 436 InFLEdTW~LQss~~e~kekq~~dELer~~d~Fv~La~~~Ls~~keeL~psI~rI~~~V~nLk~l~~~~e~~~~~d~e~S 515 (684)
..++..-|.........-..-+. .--..|++--+.-....|+.+.-.-......+.....+.............+.
T Consensus 90 ~~~l~ei~~~~~~l~~~~~~~~~----~PL~~f~~~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k~~e~~l~Ea~~ 165 (265)
T 2q12_A 90 SKVIDELSSCHAVLSTQLADAMM----FPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTE 165 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTH----HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHH
Confidence 55566666655555432222222 22344555555555566666665555555555554444433211000012234
Q ss_pred cccCcccchHHHHHhHhHHHH-----HHHHhhhhhHHHHHhh-----hcC-C-CCCCchHHHHHHHHHHHHHHHhcc
Q 005674 516 KELNPRKNLEEEYLDYEAKII-----TTFSVVDNMKEQFYAQ-----RGA-N-SRKDDPRVKELFDDIEKLRLEFES 580 (684)
Q Consensus 516 k~~npRk~LEeeYLe~E~Kii-----~~fSivD~mk~~fy~~-----q~~-~-sRkdd~~vkeLf~~IeKlR~efEs 580 (684)
+...-|+..+..-|||=.+|- .-|-+++.|..-++++ +|. . ...=.|-.++|-..+.++|.+|+.
T Consensus 166 ~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~ 242 (265)
T 2q12_A 166 DVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDS 242 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555668888887788766552 2245666666544433 343 2 236688889999999999998864
No 25
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=50.99 E-value=2.1e+02 Score=29.16 Aligned_cols=199 Identities=14% Similarity=0.185 Sum_probs=93.6
Q ss_pred HHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhc----------hHHHHHHhhhhhcchh
Q 005674 361 EISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTK----------EDELLKSIAACRVESD 430 (684)
Q Consensus 361 EI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~K----------EdELskSIasc~vEA~ 430 (684)
=|..+|.+-+.|+..|+++-........ .-..|-.|.+.++.+|..= .+++..
T Consensus 45 ~l~~~E~~~~~l~~~l~kl~k~~~~~~~-------~~~~~~~a~~~f~~~l~~~~~~~~~~~~~d~~~~~---------- 107 (407)
T 4h8s_A 45 LLSVFEEDAGTLTDYTNQLLQAMQRVYG-------AQNEMCLATQQLSKQLLAYEKQNFALGKGDEEVIS---------- 107 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHTTGGGSCCC----CHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhhccccccCCcHHHHH----------
Confidence 3566777777777777777665443332 3334555666666665321 122211
Q ss_pred hHHHHHHhhchhhhHHHhHHHHHHhhhhHHHHhhHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHhhhcccCCCccCCCC
Q 005674 431 VLSTWINFLEDSWVLQCSQMELKEKQVSEELVKHEDYFVNLAISLLSAYKKELGPSISRIGKFVENLKNLSEGSENASSG 510 (684)
Q Consensus 431 vv~tWInFLEdTW~LQss~~e~kekq~~dELer~~d~Fv~La~~~Ls~~keeL~psI~rI~~~V~nLk~l~~~~e~~~~~ 510 (684)
.+.....++..-|..+......-+..+.+.| +.|++--+.-+...|+.+.-.-..-...+.....+....+.....
T Consensus 108 ~l~~f~~~~~ei~~~~~~L~~~~~~~i~~pL----~~f~k~di~~~ke~kK~Fek~~~~Yd~~l~Ky~~~~k~k~~~~~~ 183 (407)
T 4h8s_A 108 TLHYFSKVVDELNLLHTELAKQLADTMVLPI----IQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENEKVK 183 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH----HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchHHH
Confidence 2333333444444444444333333344333 345554444455555555555555555555544444322110000
Q ss_pred CCccccccCcccchHHHHHhHhHHH-----HHHHHhhhhhHHHHHhh-----hcC--CCCCCchHHHHHHHHHHHHHHHh
Q 005674 511 DDEHSKELNPRKNLEEEYLDYEAKI-----ITTFSVVDNMKEQFYAQ-----RGA--NSRKDDPRVKELFDDIEKLRLEF 578 (684)
Q Consensus 511 d~e~Sk~~npRk~LEeeYLe~E~Ki-----i~~fSivD~mk~~fy~~-----q~~--~sRkdd~~vkeLf~~IeKlR~ef 578 (684)
.+.+.+...-|+..+..-|||=.+| =-.|-+++.|...++++ +|. ....=+|-+++|-..+..+|.++
T Consensus 184 ~e~~~~l~~~Rk~f~~asldyv~~l~~lq~rk~~e~le~l~~~~~a~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 263 (407)
T 4h8s_A 184 TEVGKEVAAARRKQHLSSLQYYCALNALQYRKQMAMMEPMIGFAHGQINFFKKGAEMFSKRMDSFLSSVADMVQSIQVEL 263 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112333445666666555553332 12234555555433332 222 33344566677766666666665
Q ss_pred cc
Q 005674 579 ES 580 (684)
Q Consensus 579 Es 580 (684)
+.
T Consensus 264 ~~ 265 (407)
T 4h8s_A 264 EA 265 (407)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 26
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=49.30 E-value=84 Score=29.71 Aligned_cols=61 Identities=21% Similarity=0.274 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHH---------HH----HHHHHHHHHHHHhhHHHHHHHHHhhh
Q 005674 353 EKEKEIGAEISELVKQRDHLEAELKKVNLSLAA---------AQ----ARLRNAQEEREQFDEANDQIVEHLKT 413 (684)
Q Consensus 353 ~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~a---------A~----aRl~n~rEERdQFdEA~nqiv~hLK~ 413 (684)
.+.+++.+-|..++.+..+||-|+|++-..... +. .-......||..+.|.-+++.+.|+.
T Consensus 29 ~l~~~l~~~i~q~d~elqQLefq~kr~~~e~~~q~~~~~~p~~~~qi~~iq~q~~~ek~~r~e~k~~l~~ql~q 102 (150)
T 4dci_A 29 EAEREISNGIANADQQLAQLEQEGQTVVDQVRRQSANPLDPRVQEQVANIQQQVAGKRSELEEQKRNLLQQQAQ 102 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466788888888888888888888887433322 11 12256678999999999999998864
No 27
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=48.54 E-value=13 Score=29.51 Aligned_cols=43 Identities=14% Similarity=0.268 Sum_probs=35.6
Q ss_pred hhhhhcccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHH
Q 005674 341 LKVRVVKANESSEKEKEIGAEISELVKQRDHLEAELKKVNLSL 383 (684)
Q Consensus 341 L~fRv~K~nEvs~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL 383 (684)
-.||+=...||..---+|..++..|.++..+|..+++.++..|
T Consensus 15 ~~~rGY~~~EVD~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~l 57 (57)
T 2wuj_A 15 KSFRGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDERI 57 (57)
T ss_dssp EETTEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3688999999999999999999999999999999998877543
No 28
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=46.86 E-value=1.3e+02 Score=25.43 Aligned_cols=34 Identities=12% Similarity=0.287 Sum_probs=13.6
Q ss_pred HHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 005674 364 ELVKQRDHLEAELKKVNLSLAAAQARLRNAQEER 397 (684)
Q Consensus 364 ~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEER 397 (684)
.++++.+++..+|.+++........++...+..-
T Consensus 7 ~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l 40 (112)
T 1l8d_A 7 ELETKKTTIEEERNEITQRIGELKNKIGDLKTAI 40 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444443333333333333333
No 29
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=45.63 E-value=1.8e+02 Score=31.73 Aligned_cols=58 Identities=17% Similarity=0.197 Sum_probs=36.8
Q ss_pred hhhHHHHHHhhhcchHHHhhhHhhhhhhhHHhhhhhhcccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH
Q 005674 309 VDKLKVLSESLSNSSVKAEKRISDHRSQKEEALKVRVVKANESSEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAAQA 388 (684)
Q Consensus 309 VDKLKvLseSLanSssKAEkRI~d~R~QKEeAL~fRv~K~nEvs~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA~a 388 (684)
++=|+-..++|+|+++.+..-| +.|.+.+...++|..+++..+++.+..|..-++
T Consensus 102 LqeLe~~l~~lsn~Ts~~~~~i-------------------------~~Iq~slk~~Q~Qi~en~n~~~~~~~~~e~~~~ 156 (464)
T 1m1j_B 102 LRDLKDRVAKFSDTSTTMYQYV-------------------------NMIDNKLVKTQKQRKDNDIILSEYNTEMELHYN 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-------------------------HHHHHHhhcccccccchhhHHHHHHHHHHHHHH
Confidence 5556666677777777555443 356666666777777777777776666665555
Q ss_pred HHH
Q 005674 389 RLR 391 (684)
Q Consensus 389 Rl~ 391 (684)
.++
T Consensus 157 ~i~ 159 (464)
T 1m1j_B 157 YIK 159 (464)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 30
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=38.71 E-value=55 Score=26.01 Aligned_cols=50 Identities=22% Similarity=0.225 Sum_probs=32.0
Q ss_pred HHhhhHhhhhhhhHHhhhhhhcccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHhH
Q 005674 325 KAEKRISDHRSQKEEALKVRVVKANESSEKEKEIGAEISELVKQRDHLEAELKKVNL 381 (684)
Q Consensus 325 KAEkRI~d~R~QKEeAL~fRv~K~nEvs~~EKEl~aEI~~LekqrdeLEAeLKkVN~ 381 (684)
|.|+|-.-| ++-|.++|-.|-..+.++|. ++..|+.+.++|.+++..+..
T Consensus 1 K~errr~rN---r~AA~k~R~rKk~~~~~Le~----~v~~L~~~n~~L~~~v~~L~~ 50 (62)
T 1jnm_A 1 KAERKRMRN---RIAASKSRKRKLERIARLEE----KVKTLKAQNSELASTANMLRE 50 (62)
T ss_dssp CHHHHHHHH---HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHh---HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 345555555 36788999999888877775 345566666666555554433
No 31
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=38.45 E-value=2.8e+02 Score=28.47 Aligned_cols=36 Identities=28% Similarity=0.355 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHH
Q 005674 358 IGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNA 393 (684)
Q Consensus 358 l~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~ 393 (684)
|-++.+.-+|+..|||+|.+++|..|.-++|.++..
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (471)
T 3mq9_A 434 LDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERL 469 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444555677788888888888777777665543
No 32
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=37.70 E-value=1.2e+02 Score=26.30 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHH
Q 005674 351 SSEKEKEIGAEISELVKQRDHLEAELKKVNLS 382 (684)
Q Consensus 351 vs~~EKEl~aEI~~LekqrdeLEAeLKkVN~s 382 (684)
+..-|.++..|+..|++++..|.++|+.+...
T Consensus 16 l~~eE~~L~~eL~~lEke~~~l~~el~~le~E 47 (96)
T 3q8t_A 16 LALEEERLIQELEDVEKNRKVVAENLEKVQAE 47 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 44556666677777777777666666655443
No 33
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=37.31 E-value=2e+02 Score=29.62 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 005674 351 SSEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEER 397 (684)
Q Consensus 351 vs~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEER 397 (684)
+....+....||..|.++++.|+.++-++...+.-|.++++++-...
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (487)
T 3oja_A 433 AIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVRE 479 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHHHH
Confidence 45567778889999999999999999999999999999999886544
No 34
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=37.19 E-value=1.1e+02 Score=27.21 Aligned_cols=39 Identities=26% Similarity=0.298 Sum_probs=31.0
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH
Q 005674 348 ANESSEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAA 386 (684)
Q Consensus 348 ~nEvs~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA 386 (684)
-+.|.++.+||..||..|+++.+.||.-..+.+.--|-|
T Consensus 42 c~~Vd~t~~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA 80 (96)
T 1t3j_A 42 CQQVDMTQKHLEEEIARLSKEIDQLEKMQNNSKLLRNKA 80 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 467899999999999999999999987666655544433
No 35
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=35.82 E-value=86 Score=28.52 Aligned_cols=55 Identities=27% Similarity=0.392 Sum_probs=40.0
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-hHHHH-------HHHHHhhhchHHHHHHhhh
Q 005674 370 DHLEAELKKVNLSLAAAQARLRNAQEEREQF-DEAND-------QIVEHLKTKEDELLKSIAA 424 (684)
Q Consensus 370 deLEAeLKkVN~sL~aA~aRl~n~rEERdQF-dEA~n-------qiv~hLK~KEdELskSIas 424 (684)
.+|+++++.-..+|..|+-+|+.+.+-=++= |+-|. ..|.+|+.|-.||-+-+|-
T Consensus 38 eeLQ~Ei~~~E~QL~iArQKLkdAe~~~E~DPDevNK~tl~~R~~~Vsalq~KiaeLKrqLAd 100 (107)
T 2k48_A 38 QELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLAD 100 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888888889999999999887643321 34443 3567888888888887764
No 36
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=33.31 E-value=70 Score=31.17 Aligned_cols=25 Identities=24% Similarity=0.222 Sum_probs=9.8
Q ss_pred HHHHHHhhhHHHHHHHHHhHHHHHH
Q 005674 362 ISELVKQRDHLEAELKKVNLSLAAA 386 (684)
Q Consensus 362 I~~LekqrdeLEAeLKkVN~sL~aA 386 (684)
+..++.+..+++++|......|..|
T Consensus 71 ~~~~~a~l~~~~a~l~~a~~~~~~a 95 (341)
T 3fpp_A 71 IKEVEATLMELRAQRQQAEAELKLA 95 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444444333333333
No 37
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=33.18 E-value=1e+02 Score=32.37 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q 005674 357 EIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQF 400 (684)
Q Consensus 357 El~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQF 400 (684)
++..||..|++++.+|+.++++....+.....++...+..|.+.
T Consensus 7 ~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l 50 (403)
T 4etp_A 7 ALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTL 50 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46678888888888888888888888888888888888887766
No 38
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=31.81 E-value=1.2e+02 Score=30.06 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=18.8
Q ss_pred chhhHHHHHHhhchhhhHHHhHHHHHHhhhh
Q 005674 428 ESDVLSTWINFLEDSWVLQCSQMELKEKQVS 458 (684)
Q Consensus 428 EA~vv~tWInFLEdTW~LQss~~e~kekq~~ 458 (684)
++.++.+-+-+|+|+-..+.....++....|
T Consensus 69 ~a~If~ah~~~L~D~~l~~~v~~~I~~~~~~ 99 (258)
T 1zym_A 69 KEAIFEGHIMLLEDEELEQEIIALIKDKHMT 99 (258)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhCCCC
Confidence 4556667777777766666666655544444
No 39
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=31.25 E-value=84 Score=32.30 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHHH
Q 005674 357 EIGAEISELVKQRDHLEAELKK 378 (684)
Q Consensus 357 El~aEI~~LekqrdeLEAeLKk 378 (684)
|+-.||..|+.+..+++||.|+
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~ 468 (471)
T 3mq9_A 447 ELEGEITTLNHKLQDASAEVER 468 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555555443
No 40
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=30.68 E-value=1.1e+02 Score=27.94 Aligned_cols=57 Identities=26% Similarity=0.381 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-hHHHH-------HHHHHhhhchHHHHHHhhhh
Q 005674 369 RDHLEAELKKVNLSLAAAQARLRNAQEEREQF-DEAND-------QIVEHLKTKEDELLKSIAAC 425 (684)
Q Consensus 369 rdeLEAeLKkVN~sL~aA~aRl~n~rEERdQF-dEA~n-------qiv~hLK~KEdELskSIasc 425 (684)
..+|++++..-..+|..|+-+|+.+.+-=++= |+-|. ..|..|+.|-.||-+.++.-
T Consensus 24 ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e~DPDevNK~tl~~R~~~Vs~lq~KiaeLKrqLAd~ 88 (113)
T 4fi5_A 24 MEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGVAVSIQAKIDELKRQLADR 88 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788888889999999999998887533321 34443 35678888988888888753
No 41
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=30.41 E-value=62 Score=33.59 Aligned_cols=56 Identities=7% Similarity=0.234 Sum_probs=45.3
Q ss_pred hhhhhhhhhhhhhhHHHhhccCCChhHHHHHHHHHh-hhccCchh-HHHHHHHhHHHHHH
Q 005674 140 FRDVFLQSQALEAITVSMILEAPNEEEISLLLEMFG-LCLTGGKE-VHHAITSSIQDLAT 197 (684)
Q Consensus 140 FrdVFL~SqALEgI~lSmIleaP~eEEvsLLlEiFg-lCL~Ggke-vH~aivssiqdLA~ 197 (684)
+..|+-+.+++..|+.+ |-+|+..-+.+.+|+++ +|+..+.+ -|..+++++..++.
T Consensus 154 ~~~vl~~~~~i~~l~~~--L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~ 211 (383)
T 3eg5_B 154 IKTMLETEEGILLLVRA--MDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAE 211 (383)
T ss_dssp HHHHHTCSSHHHHHHHT--CCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHH--hCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHH
Confidence 45577777788777776 67889999999999998 89988744 49999999988765
No 42
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=30.31 E-value=1.2e+02 Score=27.04 Aligned_cols=57 Identities=23% Similarity=0.309 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-hHHHH-------HHHHHhhhchHHHHHHhhhh
Q 005674 369 RDHLEAELKKVNLSLAAAQARLRNAQEEREQF-DEAND-------QIVEHLKTKEDELLKSIAAC 425 (684)
Q Consensus 369 rdeLEAeLKkVN~sL~aA~aRl~n~rEERdQF-dEA~n-------qiv~hLK~KEdELskSIasc 425 (684)
..+|+.+++....+|..|+-+|+.+.+-=++= |+-|. ..|.+|+.|-.+|-+.+|.-
T Consensus 7 i~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNk~~~~~R~~~V~~lq~Ki~elkr~lAd~ 71 (96)
T 2ic9_A 7 LKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELADL 71 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788889999999999999999887543321 34443 35677888888888777643
No 43
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=29.60 E-value=1.4e+02 Score=25.81 Aligned_cols=55 Identities=24% Similarity=0.344 Sum_probs=40.3
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-hHHHHH-------HHHHhhhchHHHHHHhhh
Q 005674 370 DHLEAELKKVNLSLAAAQARLRNAQEEREQF-DEANDQ-------IVEHLKTKEDELLKSIAA 424 (684)
Q Consensus 370 deLEAeLKkVN~sL~aA~aRl~n~rEERdQF-dEA~nq-------iv~hLK~KEdELskSIas 424 (684)
.+|+.+++.-..+|..|+-+|+.+.+-=++= |+-|.+ .|.+|+.|-.||-+-++-
T Consensus 8 ~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNK~~~~~R~~~V~~lq~Ki~elkrqlAd 70 (78)
T 2ic6_A 8 KEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELAD 70 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688888999999999999999887533221 444443 467888888888877764
No 44
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=28.09 E-value=1.3e+02 Score=25.20 Aligned_cols=24 Identities=29% Similarity=0.458 Sum_probs=12.0
Q ss_pred HHHHHHHhhhHHHHHHHHHhHHHH
Q 005674 361 EISELVKQRDHLEAELKKVNLSLA 384 (684)
Q Consensus 361 EI~~LekqrdeLEAeLKkVN~sL~ 384 (684)
|+..|+++.+.||++++.++..|+
T Consensus 23 Ele~le~~Ie~LE~~i~~le~~la 46 (89)
T 2lw1_A 23 ELEQLPQLLEDLEAKLEALQTQVA 46 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455555555555555554444
No 45
>3etv_A Protein transport protein TIP20,linker,protein transport protein DSL1; TIP20P-DSL1P complex, endoplasmic reticulum, ER-golgi transport; 1.94A {Saccharomyces cerevisiae} PDB: 3etu_A
Probab=27.52 E-value=3.7e+02 Score=28.73 Aligned_cols=61 Identities=18% Similarity=0.261 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhchHHHHHHhhhhhc
Q 005674 357 EIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDEANDQIVEHLKTKEDELLKSIAACRV 427 (684)
Q Consensus 357 El~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdEA~nqiv~hLK~KEdELskSIasc~v 427 (684)
+|-..|.+.++|||+|--+|+.++... |.+|--.--++-++|++ |..++.+|++.|...+-
T Consensus 13 ~id~~I~~i~~eRd~La~~lq~~~~~~--~~~~~~~~~~~~~d~e~--------llkre~~Lt~EL~~l~~ 73 (355)
T 3etv_A 13 NINDRIKQVQNERNELASKLQNLKQSL--ASNDTGGGSGGGSDSSD--------LLQREAILANELNILDN 73 (355)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHC-------------------------------CTTHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccc--ccccccCCCcchhhHHH--------HHHHHHHHHHHHHHHHh
Confidence 456789999999999999999999877 33332222234445544 88899999999876553
No 46
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=27.27 E-value=3.3e+02 Score=24.13 Aligned_cols=251 Identities=12% Similarity=0.116 Sum_probs=0.0
Q ss_pred ccchhhhhhHHHHHHHHHHhhhhhhccCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCChhhh
Q 005674 226 MNSDIERIDAEASDLKKRLEGMKALQNSSNEDLEQASEKTTKATIEALKEALAQIRVCTRLEGLLLKKKLLSYGDSPEVH 305 (684)
Q Consensus 226 ~nadi~riD~Ea~~L~~kl~~~~~~~~~~~~~~~k~~~~~~~a~~ea~keal~qirlCSrlE~LlLkKksl~~GDS~e~h 305 (684)
+..++..+......|..++.... ..-......+..++..+..++- .++.+--.-..+.
T Consensus 11 l~~~~~~~~~~~~~l~~~l~~l~------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------- 68 (284)
T 1c1g_A 11 LKLDKENALDRADEAEADKKAAE------------DRSKQLEDELVSLQKKLKATED--ELDKYSEALKDAQ-------- 68 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH--------
T ss_pred HHHhHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH--------
Q ss_pred hhhhhhHHHHHHhhhcchHHHhhhHhhhhhhhHHhhhhhhcccchhhHHHHHH---HHHHHHHHHhhhHHHHHHHHHhHH
Q 005674 306 AQKVDKLKVLSESLSNSSVKAEKRISDHRSQKEEALKVRVVKANESSEKEKEI---GAEISELVKQRDHLEAELKKVNLS 382 (684)
Q Consensus 306 aqkVDKLKvLseSLanSssKAEkRI~d~R~QKEeAL~fRv~K~nEvs~~EKEl---~aEI~~LekqrdeLEAeLKkVN~s 382 (684)
..+..+..--..+-........||.....+.+..-.-...-.......+.++ ..++..++.+...++.++..+...
T Consensus 69 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (284)
T 1c1g_A 69 -EKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQ 147 (284)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHH-----------------HHHhhhchHHHHHHhhhhhcchhhHHHHHHhhch---h
Q 005674 383 LAAAQARLRNAQEEREQFDEANDQI-----------------VEHLKTKEDELLKSIAACRVESDVLSTWINFLED---S 442 (684)
Q Consensus 383 L~aA~aRl~n~rEERdQFdEA~nqi-----------------v~hLK~KEdELskSIasc~vEA~vv~tWInFLEd---T 442 (684)
+..+...+..++.+..........+ +..+...-..+...+.....+...+...+.-++. .
T Consensus 148 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 227 (284)
T 1c1g_A 148 LKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKV 227 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q ss_pred hhHHHhHHHHHHhhhhHHHHhhHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHhhhcc
Q 005674 443 WVLQCSQMELKEKQVSEELVKHEDYFVNLAISLLSAYKKELGPSISRIGKFVENLKNL 500 (684)
Q Consensus 443 W~LQss~~e~kekq~~dELer~~d~Fv~La~~~Ls~~keeL~psI~rI~~~V~nLk~l 500 (684)
..-+-.-.+..-.....++.......-.+-..+ ..+...+.-.-.++..+...|.++
T Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~ 284 (284)
T 1c1g_A 228 LSDKLKEAETRAEFAERSVTKLEKSIDDLEDEL-YAQKLKYKAISEELDHALNDMTSI 284 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcC
No 47
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=26.84 E-value=3.2e+02 Score=25.07 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=15.6
Q ss_pred HHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005674 362 ISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEE 396 (684)
Q Consensus 362 I~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEE 396 (684)
+..|+.+.++++-++..+.-.|.+++.++..++.+
T Consensus 77 ~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e 111 (138)
T 3hnw_A 77 ADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKE 111 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444333
No 48
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=26.78 E-value=2e+02 Score=24.91 Aligned_cols=47 Identities=26% Similarity=0.408 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhH
Q 005674 356 KEIGAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQFDE 402 (684)
Q Consensus 356 KEl~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQFdE 402 (684)
..+-+|+..|.+....|.++|++|...=+....-|...+.|-.++|+
T Consensus 7 ~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~ 53 (96)
T 3q8t_A 7 EQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQ 53 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 44566677777777777777777666655555555555555544443
No 49
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=25.54 E-value=4.4e+02 Score=24.98 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=30.2
Q ss_pred HHHHhhchhhhHHHhHHHHHHhhhhHHHHhhHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 005674 434 TWINFLEDSWVLQCSQMELKEKQVSEELVKHEDYFVNLAISLLSAYKKELGPSISRIGKFVENL 497 (684)
Q Consensus 434 tWInFLEdTW~LQss~~e~kekq~~dELer~~d~Fv~La~~~Ls~~keeL~psI~rI~~~V~nL 497 (684)
.+...|..+=..|..|-+..-.++.+.|+.+...++...+..|..|-......+..+....+.|
T Consensus 194 ~Y~~~v~~~n~~~~~~~~~~~~~~~~~lQ~le~~r~~~lk~~l~~~~~~~~~~~~~~~~~~~~l 257 (305)
T 2efl_A 194 DYSSILQKFNHEQHEYYHTHIPNIFQKIQEMEERRIVRMGESMKTYAEVDRQVIPIIGKCLDGI 257 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3444444444443333334444555555555555555555555555554444333333333333
No 50
>2js5_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural genomics, PSI-2, protein structure initiative; NMR {Methylococcus capsulatus}
Probab=24.99 E-value=67 Score=27.31 Aligned_cols=28 Identities=32% Similarity=0.466 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005674 369 RDHLEAELKKVNLSLAAAQARLRNAQEE 396 (684)
Q Consensus 369 rdeLEAeLKkVN~sL~aA~aRl~n~rEE 396 (684)
.++|.+++||+|..-.++.+.|+++-|+
T Consensus 5 i~eLkkevkKL~~~A~q~kmdLHDLaEd 32 (71)
T 2js5_A 5 AEELKAKLKKLNAQATALKMDLHDLAED 32 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 3678999999999999999999998763
No 51
>3csx_A Putative uncharacterized protein; metalloprotein, nitrogen fixation, cyanobacteria, circadian rhythms, metal binding protein, unknown function; 1.84A {Cyanothece}
Probab=24.49 E-value=60 Score=28.23 Aligned_cols=28 Identities=18% Similarity=0.270 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005674 369 RDHLEAELKKVNLSLAAAQARLRNAQEE 396 (684)
Q Consensus 369 rdeLEAeLKkVN~sL~aA~aRl~n~rEE 396 (684)
.++|.+++||+|..-.++.+.||++-|+
T Consensus 17 i~eLkkevkKL~~~A~q~kmdLHDLaEd 44 (81)
T 3csx_A 17 VADLKKKVRKLNSKAGQMKMDLHDLAEG 44 (81)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4678999999999999999999998775
No 52
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=24.13 E-value=3.8e+02 Score=23.76 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHH
Q 005674 358 IGAEISELVKQRDHLEAELKKVNLSLAAAQARLRN 392 (684)
Q Consensus 358 l~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n 392 (684)
.-++|..|.+|.|.+..+=.++...+..++.-+.+
T Consensus 18 ye~~I~~LR~qid~~~~e~a~l~leldn~~~~~ed 52 (119)
T 3ol1_A 18 YEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMR 52 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678888888888887777777666655544433
No 53
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=24.12 E-value=3.8e+02 Score=23.76 Aligned_cols=25 Identities=24% Similarity=0.348 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhH
Q 005674 357 EIGAEISELVKQRDHLEAELKKVNL 381 (684)
Q Consensus 357 El~aEI~~LekqrdeLEAeLKkVN~ 381 (684)
.|..||..|..|+..||+.|..+..
T Consensus 47 ~L~~el~~l~~~~~~LE~~l~e~e~ 71 (129)
T 3tnu_B 47 RLRAEIDNVKKQCANLQNAIADAEQ 71 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4566777777777777777765544
No 54
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=23.69 E-value=8.2e+02 Score=27.50 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=22.1
Q ss_pred hhhhHHHhHHHHHHhhhhHHHHhhHHHHHHHHHHHHHHHHHhhchhhH
Q 005674 441 DSWVLQCSQMELKEKQVSEELVKHEDYFVNLAISLLSAYKKELGPSIS 488 (684)
Q Consensus 441 dTW~LQss~~e~kekq~~dELer~~d~Fv~La~~~Ls~~keeL~psI~ 488 (684)
-+|..|...++.+-+|+. |-.+ +.-+|.-+..|++.++
T Consensus 393 ~~~~~~~~~~dv~~~~a~---------~d~~-~~~~s~~~~~ls~~me 430 (551)
T 2b5u_A 393 AGLKAQRAQTDVNNKQAA---------FDAA-AKEKSDADAALSSAME 430 (551)
T ss_dssp HHHHHHHHHHHHHHHHHH---------HHHH-HHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhhhHHHH---------HHHH-hhcccchhhhhhhhhh
Confidence 346666666665555443 3333 3344777777777665
No 55
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=23.68 E-value=1.2e+02 Score=24.29 Aligned_cols=41 Identities=24% Similarity=0.272 Sum_probs=26.4
Q ss_pred hhhHHhhhhhhcccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 005674 335 SQKEEALKVRVVKANESSEKEKEIGAEISELVKQRDHLEAELKKV 379 (684)
Q Consensus 335 ~QKEeAL~fRv~K~nEvs~~EKEl~aEI~~LekqrdeLEAeLKkV 379 (684)
+-+.-|-.||.+|-.+...++. +...|+++.++|++++..+
T Consensus 9 rNr~AA~R~R~KKk~~~~~le~----~~~~L~~~N~~L~~~i~~L 49 (63)
T 1ci6_A 9 QNKTAATRYRQKKRAEQEALTG----ECKELEKKNEALKERADSL 49 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 4456788999999888776664 4455555555555555443
No 56
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=23.24 E-value=3e+02 Score=24.57 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhH
Q 005674 357 EIGAEISELVKQRDHLEAELKKVNL 381 (684)
Q Consensus 357 El~aEI~~LekqrdeLEAeLKkVN~ 381 (684)
.|..||..|..++..||+.|..+..
T Consensus 49 ~L~~el~~l~~~~~sLE~~l~e~e~ 73 (131)
T 3tnu_A 49 NLEIELQSQLSMKASLENSLEETKG 73 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4556777777777777776665544
No 57
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=23.22 E-value=2e+02 Score=24.10 Aligned_cols=26 Identities=19% Similarity=0.414 Sum_probs=19.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHhHHHHH
Q 005674 360 AEISELVKQRDHLEAELKKVNLSLAA 385 (684)
Q Consensus 360 aEI~~LekqrdeLEAeLKkVN~sL~a 385 (684)
+||..|..|+..||+.|..+......
T Consensus 1 ~el~~l~~~~~sLE~~l~e~e~~~~~ 26 (84)
T 1gk4_A 1 CEVDALKGTNESLERQMREMEENFAV 26 (84)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47888888888888887776655443
No 58
>2gd5_A Charged multivesicular BODY protein 3; CHMP3, ESCRT-III, protein transport; 2.80A {Homo sapiens} PDB: 3frv_A
Probab=22.98 E-value=3e+02 Score=25.52 Aligned_cols=38 Identities=24% Similarity=0.202 Sum_probs=29.5
Q ss_pred chhhHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH
Q 005674 349 NESSEKEKEIGAEISELVKQRDHLEAELKKVNLSLAAA 386 (684)
Q Consensus 349 nEvs~~EKEl~aEI~~LekqrdeLEAeLKkVN~sL~aA 386 (684)
.-+...-..|-..+..|++++..|+.+.||+...+..|
T Consensus 10 e~lr~~~~~L~~~~r~Ldr~~~kle~~ekk~~~~Ikka 47 (179)
T 2gd5_A 10 ELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDA 47 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667788889999999999999999887776544
No 59
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=22.01 E-value=2e+02 Score=26.29 Aligned_cols=37 Identities=16% Similarity=0.393 Sum_probs=26.4
Q ss_pred chhhhhhhhhhhhhhHHHhhccCCChhHHHHHHHHHhhhccCc
Q 005674 139 NFRDVFLQSQALEAITVSMILEAPNEEEISLLLEMFGLCLTGG 181 (684)
Q Consensus 139 nFrdVFL~SqALEgI~lSmIleaP~eEEvsLLlEiFglCL~Gg 181 (684)
.|++.|.+ ..+.|.||..++.++.+++.++--|..+|
T Consensus 39 ~f~~e~V~------~~i~~alE~~~~~~re~~~~LL~~L~~~~ 75 (152)
T 2ion_A 39 HFHHELVY------EAIVMVLESTGESAFKMILDLLKSLWKSS 75 (152)
T ss_dssp GGHHHHHH------HHHHHHHHCCSSHHHHHHHHHHHHHHHTT
T ss_pred cchHHHHH------HHHHHHHcCCChHHHHHHHHHHHHHHHCC
Confidence 67887776 45667789887777777777776555444
No 60
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=21.73 E-value=1.3e+02 Score=23.78 Aligned_cols=46 Identities=30% Similarity=0.323 Sum_probs=29.4
Q ss_pred hhhHhhhhhhhHHhhhhhhcccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 005674 327 EKRISDHRSQKEEALKVRVVKANESSEKEKEIGAEISELVKQRDHLEAELKKV 379 (684)
Q Consensus 327 EkRI~d~R~QKEeAL~fRv~K~nEvs~~EKEl~aEI~~LekqrdeLEAeLKkV 379 (684)
.+|+..|| +-|...|..|-.-+.++|.. +..|+++-..|..++..+
T Consensus 3 ~rR~~~NR---esA~rSR~RKk~~~~~LE~~----v~~L~~eN~~L~~~~~~L 48 (55)
T 1dh3_A 3 EVRLMKNR---EAARESRRKKKEYVKSLENR----VAVLENQNKTLIEELKAL 48 (55)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhH---HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 46666666 66888899888777766654 344555555555555444
No 61
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=21.66 E-value=7.2e+02 Score=27.91 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 005674 359 GAEISELVKQRDHLEAELKKVNLSLAAAQARLRNAQEEREQ 399 (684)
Q Consensus 359 ~aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n~rEERdQ 399 (684)
-+||..+++-++.+.+++-.++.....|.-+|+.+++|.+-
T Consensus 362 rNEItsaeSaInslqaqvSa~t~e~k~A~d~l~a~~kek~~ 402 (602)
T 1cii_A 362 RNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKEN 402 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555555555555555555555443
No 62
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=20.73 E-value=43 Score=35.06 Aligned_cols=50 Identities=18% Similarity=0.209 Sum_probs=42.9
Q ss_pred cCCCcchhhhhhhhhhHHHhhchhhhhhhhhhhhcccccccccHHHHHHH
Q 005674 16 GNKNNLTRTVKNYADNVVHQAGQAVAEGAKILQDRIGVRSFKSVNQTIRR 65 (684)
Q Consensus 16 Gg~~~ltRtV~~YadsVv~hAGqAVaeGAKilqdRig~rnykS~k~TvkR 65 (684)
||-+-..+-|+|+.-++.|-|.++.-...++||+.+|..|+.-+|.-...
T Consensus 20 ~~~~~~~~W~~nS~laadhvAAGsFetAm~lLnrQvGivnf~PLk~~F~~ 69 (325)
T 3mv2_A 20 GPHMETAIWIKNSKLPAVLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTN 69 (325)
T ss_dssp -CCHHHHHHHHHCCSHHHHHHTTCHHHHHHHHHHHHCBCCCGGGHHHHHH
T ss_pred CCCcHHHHHHHcCCcHHHHHHccCHHHHHHHHHHHhCccCchhhHHHHHH
Confidence 56666778899999999999999999999999999999999988875443
No 63
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=20.62 E-value=2.2e+02 Score=25.26 Aligned_cols=33 Identities=30% Similarity=0.369 Sum_probs=17.2
Q ss_pred HHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHH
Q 005674 360 AEISELVKQRDHLEAELKKVNLSLAAAQARLRN 392 (684)
Q Consensus 360 aEI~~LekqrdeLEAeLKkVN~sL~aA~aRl~n 392 (684)
.||.+|..+...|+++|--+-..-++-...|..
T Consensus 36 ~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e 68 (129)
T 3tnu_B 36 HEISEMNRMIQRLRAEIDNVKKQCANLQNAIAD 68 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 456666666666666665443333333333333
No 64
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=20.54 E-value=1.4e+02 Score=25.19 Aligned_cols=26 Identities=35% Similarity=0.348 Sum_probs=11.6
Q ss_pred HHHHHHHHhhhHHHHHHHHHhHHHHH
Q 005674 360 AEISELVKQRDHLEAELKKVNLSLAA 385 (684)
Q Consensus 360 aEI~~LekqrdeLEAeLKkVN~sL~a 385 (684)
+||..|..|+..||+.|..+......
T Consensus 3 ~eie~L~~q~~~Le~~l~e~E~~~~~ 28 (86)
T 1x8y_A 3 CQLSQLQCQLAAKEAKLRDLEDSLAR 28 (86)
T ss_dssp ---------CTTHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788888888888777776665443
No 65
>4gyt_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, predicted legionella effector; 2.05A {Legionella pneumophila subsp}
Probab=20.51 E-value=5.2e+02 Score=24.05 Aligned_cols=144 Identities=19% Similarity=0.287 Sum_probs=78.0
Q ss_pred hhhhhHHHhhccCCChhHHHHHHHHHhhhccCchhHHHHHHHhHHHH----HHHhhcc---------hhh-hccChHH-H
Q 005674 149 ALEAITVSMILEAPNEEEISLLLEMFGLCLTGGKEVHHAITSSIQDL----ATAISKY---------QDE-VLVKREE-L 213 (684)
Q Consensus 149 ALEgI~lSmIleaP~eEEvsLLlEiFglCL~GgkevH~aivssiqdL----A~afs~y---------~DE-VLvKReE-L 213 (684)
-|-|+..+|+.-+-....-..|-.+|+. .|. .........++++ ...+... .|+ -|.-|-+ |
T Consensus 32 ElHG~L~Gll~gg~~~~~~~wl~~l~~~--~~~-~~~~~~~~~l~~l~~~~~~~L~d~~~~f~plLP~dd~~l~eR~~aL 108 (194)
T 4gyt_A 32 ELHGIMCGYLCAGADSQGEAYIRALLNN--KKD-EQSRNALLSMFSVFSISQQQMNNFDFEFEMLLPDDDESLVTRAQAF 108 (194)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTTTT--CCS-HHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHhc--CCc-cccHHHHHHHHHHHHHHHHHHhcCCcccccCCCCcccchHHHHHHH
Confidence 3678888887665555566666677663 222 2222332333322 2333321 123 2555644 5
Q ss_pred HHHHHHhhhhccccc-hhhh-hhHHHHHHHHHHhhhhhhccCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH--HHH
Q 005674 214 LQFAQTAITGLKMNS-DIER-IDAEASDLKKRLEGMKALQNSSNEDLEQASEKTTKATIEALKEALAQIRVCTRL--EGL 289 (684)
Q Consensus 214 LqfaQ~AIsGLK~na-di~r-iD~Ea~~L~~kl~~~~~~~~~~~~~~~k~~~~~~~a~~ea~keal~qirlCSrl--E~L 289 (684)
-+.+|+-+.|+-+.. +... ++.|..++-+-|..+.........+.+ ..-.+|.|.+.-||+|-.+ .++
T Consensus 109 ~~Wc~GFL~G~gl~~~~~~~~~~~e~~E~l~dl~~Ia~l~~d~~dd~e--------e~E~~~~El~EyvR~aal~~~~e~ 180 (194)
T 4gyt_A 109 SEWCEGFTQGLTIAGVGMEQFYEEESQDALQHLMEFAELDCESLEVGE--------EDERALMEVSEYTRMAVLRLHSDL 180 (194)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCHHHHHHHHHHHHHTTCCTTTCCSSH--------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHhccCcccCcCc--------ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 577999999998753 3333 688888888888777644332111111 2345777888889999887 777
Q ss_pred HHhhhhccCCCChhhh
Q 005674 290 LLKKKLLSYGDSPEVH 305 (684)
Q Consensus 290 lLkKksl~~GDS~e~h 305 (684)
-.+.. ..+++|-+|
T Consensus 181 ~~~~~--~~~~~~tlH 194 (194)
T 4gyt_A 181 VLHER--ELGDSGTTH 194 (194)
T ss_dssp HHCC------------
T ss_pred ccCcc--CCCCCCCCC
Confidence 65433 336777776
No 66
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=20.44 E-value=2.5e+02 Score=24.84 Aligned_cols=37 Identities=16% Similarity=0.393 Sum_probs=25.3
Q ss_pred chhhhhhhhhhhhhhHHHhhccCCChhHHHHHHHHHhhhccCc
Q 005674 139 NFRDVFLQSQALEAITVSMILEAPNEEEISLLLEMFGLCLTGG 181 (684)
Q Consensus 139 nFrdVFL~SqALEgI~lSmIleaP~eEEvsLLlEiFglCL~Gg 181 (684)
.|++.|.+ ..+.|.+|..++.++.+++.++--|..+|
T Consensus 37 ~f~~e~V~------~~i~~alE~~~~~~~e~~~~LL~~L~~~~ 73 (129)
T 2nsz_A 37 HFHHELVY------EAIVMVLESTGESAFKMILDLLKSLWKSS 73 (129)
T ss_dssp GGHHHHHH------HHHHHHHHCCSSHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHH------HHHHHHHcCCChHHHHHHHHHHHHHHHCC
Confidence 67777776 45567789887777777777776555444
Done!