BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005675
(684 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
Length = 694
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/691 (77%), Positives = 594/691 (85%), Gaps = 15/691 (2%)
Query: 2 ANRLGSLSQPSSNS---DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE 58
ANR+GS SQ +S DDLY ELWKACAGPLVDVPK G+RV+YFPQGHMEQLEASTNQE
Sbjct: 3 ANRVGSFSQGNSEGSCGDDLYTELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTNQE 62
Query: 59 LNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-SPR 117
LNQR+PLF LPSKILCRV+NIHL+AEQ+TDEVYAQITLLPE Q EPT+PDP PA+ S R
Sbjct: 63 LNQRVPLFNLPSKILCRVINIHLLAEQDTDEVYAQITLLPESDQTEPTSPDPSPAEPSRR 122
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
P VHSF KVLTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVAKDLHGYEWRFKH
Sbjct: 123 PAVHSFCKVLTASDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKH 182
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
IFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR LARQQSSMPSSVIS
Sbjct: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVIS 242
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
SQSMHLGVLATASHAVATQT+FVVYYKPRTSQFIISLNKYLEA+NNKF+VGMR+KMRFEG
Sbjct: 243 SQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISLNKYLEAINNKFSVGMRFKMRFEG 302
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
EDSPERRFSGT+VGVEDFSPHW DSKWR LKVQWDEPASI RPD+VSPWEIEPF ASA
Sbjct: 303 EDSPERRFSGTIVGVEDFSPHWLDSKWRQLKVQWDEPASIPRPDKVSPWEIEPFSASAPS 362
Query: 358 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAW 417
N+ QPV KNKRPR +EVP LDL S AS W++RL QSH+LTQLSVTAE KR +NH+ W
Sbjct: 363 NISQPVPLKNKRPRPPIEVPTLDLSSTASPLWNSRLTQSHDLTQLSVTAEGKRNENHIMW 422
Query: 418 HHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHP 477
HHK +D +S+SN +SRTQ++G WL+SP V SQ LFQE +D+K++S WP SG+STP
Sbjct: 423 HHKQNDINSHSNSISRTQTEGGWLSSPLVNVSQHLFQEVTEDSKSVSNWPVVSGYSTPQS 482
Query: 478 SKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVP-----VSSLTTEGHI 532
SK ND++L+ VE GRK++ TS RLFGIELINH+ SS P+EK P VSS TTE H+
Sbjct: 483 SK-LNDSILDPVEKGRKSDVATSYRLFGIELINHSASSLPTEKAPAQPLSVSSGTTEAHV 541
Query: 533 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 592
+ST+S AADSD KSDI+ KE+K EQ+ VSPK++QS+QS S RSRTKVQMQGVAVGR
Sbjct: 542 VSTLS-AADSDQKSDIS---KERKPEQLHVSPKDAQSRQSS-ASTRSRTKVQMQGVAVGR 596
Query: 593 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
A+DLT + GY+ L+DELEEMFDIKGQLH R KWEIVYTDDEGDMMLVGDDPW EFCNMV+
Sbjct: 597 AIDLTMIKGYNQLLDELEEMFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNMVR 656
Query: 653 RIFICSSQDVKKMSPGSKLPMFSIEGFGLFL 683
RIFICSSQDVKKM PGSKLPMFS EG G +
Sbjct: 657 RIFICSSQDVKKMMPGSKLPMFSTEGEGTVI 687
>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/672 (72%), Positives = 557/672 (82%), Gaps = 16/672 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWKACAGPLVDVP++G+RV+YFPQGH+EQLEASTNQEL+QRIPLF LPSKILCR
Sbjct: 10 DDLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCR 69
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V++I L AEQETDEVYAQITLLPEP Q EP +PDPC + PRP VHSF KVLTASDTSTH
Sbjct: 70 VIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPPRPTVHSFCKVLTASDTSTH 129
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHA ECLP LDMNQ+TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 130 GGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 189
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD+FVFLRG+NGEL VGVR LARQQS+MP+SVISSQSMHLGVLATASHAVAT
Sbjct: 190 VTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATASHAVAT 249
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
QT+F+VYYKPRTSQFII LNKYLEAV+N FAVGMR+KMRFEGEDSPERRFSGT+VG EDF
Sbjct: 250 QTLFIVYYKPRTSQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIVGGEDF 309
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SP WKDS+WRSLKVQWDEPASI RP++VSPWEIE +V+S L P + KNKRPR +
Sbjct: 310 SPEWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGVLKNKRPRSNES 369
Query: 376 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD-----FSSNSNF 430
P +AASA W L QSH+LTQ+S TAE KR +NHV WHHK +D +SN+
Sbjct: 370 PVPETGSAAASAVWHLGLTQSHDLTQMSSTAEGKRSENHVMWHHKQADIGGPLINSNTAC 429
Query: 431 MSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 490
+SRTQ++G WL+S V SQ FQ+A +D+K++SAWPA SG+ST H SK +DT+++
Sbjct: 430 VSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYSTLHSSKLTSDTIIDPNG 489
Query: 491 TGRK--TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 548
G+K E TSCRLFG EL+NH +SS P K GH IS +S+ DSD KSD+
Sbjct: 490 NGKKAVAEMATSCRLFGFELMNH-SSSPPVGKA-------HGHSIS-VSSGTDSDQKSDL 540
Query: 549 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 608
+K KE+KQ Q VSPKE QSKQ+C ++ RSRTKVQMQG+AVGRA+DLT L GYD LIDE
Sbjct: 541 SKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIAVGRAVDLTALEGYDELIDE 600
Query: 609 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
LEEMF+IKG+L R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMSPG
Sbjct: 601 LEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPG 660
Query: 669 SKLPMFSIEGFG 680
SKLP+ S+EG G
Sbjct: 661 SKLPISSMEGEG 672
>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
Length = 693
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/687 (71%), Positives = 560/687 (81%), Gaps = 35/687 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWKACAGPLVDVP++G+RV+YFPQGH+EQLEASTNQEL+QRIPLF LPSKILCR
Sbjct: 10 DDLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCR 69
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V++I L AEQETDEVYAQITLLPEP Q EP +PDPC + PRP VHSF KVLTASDTSTH
Sbjct: 70 VIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPPRPTVHSFCKVLTASDTSTH 129
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHA ECLP LDMNQ+TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 130 GGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 189
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD+FVFLRG+NGEL VGVR LARQQS+MP+SVISSQSMHLGVLATASHAVAT
Sbjct: 190 VTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATASHAVAT 249
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
QT+F+VYYKPRTSQFII LNKYLEAV+N FAVGMR+KMRFEGEDSPERRFSGT+VG EDF
Sbjct: 250 QTLFIVYYKPRTSQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIVGGEDF 309
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SP WKDS+WRSLKVQWDEPASI RP++VSPWEIE +V+S L P + KNKRPR S E
Sbjct: 310 SPEWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGVLKNKRPR-SNE 368
Query: 376 VPPLDLP---------------SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHK 420
P +P +AASA W L QSH+LTQ+S TAE KR +NHV WHHK
Sbjct: 369 SP---VPGQGKFLHRFCFETGSAAASAVWHLGLTQSHDLTQMSSTAEGKRSENHVMWHHK 425
Query: 421 HSD-----FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTP 475
+D +SN+ +SRTQ++G WL+S V SQ FQ+A +D+K++SAWPA SG+ST
Sbjct: 426 QADIGGPLINSNTACVSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYSTL 485
Query: 476 HPSKPNNDTLLEQVETGRK--TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII 533
H SK +DT+++ G+K E TSCRLFG EL+NH +SS P K GH I
Sbjct: 486 HSSKLTSDTIIDPNGNGKKAVAEMATSCRLFGFELMNH-SSSPPVGKA-------HGHSI 537
Query: 534 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 593
S +S+ DSD KSD++K KE+KQ Q VSPKE QSKQ+C ++ RSRTKVQMQG+AVGRA
Sbjct: 538 S-VSSGTDSDQKSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIAVGRA 596
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 653
+DLT L GYD LIDELEEMF+IKG+L R KWEIV+TDDEGDMMLVGDDPW EFCNMV+R
Sbjct: 597 VDLTALEGYDELIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCNMVRR 656
Query: 654 IFICSSQDVKKMSPGSKLPMFSIEGFG 680
IFICSSQDVKKMSPGSKLP+ S+EG G
Sbjct: 657 IFICSSQDVKKMSPGSKLPISSMEGEG 683
>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 691
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/676 (71%), Positives = 545/676 (80%), Gaps = 23/676 (3%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D++Y LWK CAGPLVDVP+ GQRV+YFPQGHMEQLEASTNQELNQRIPL +LP+KI
Sbjct: 16 SGEDEMYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKI 75
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LCRVVN+HL+AEQETDEVYAQITL+PE +Q+EP PDPC A+ PR VHSFSKVLTASDT
Sbjct: 76 LCRVVNVHLLAEQETDEVYAQITLVPESNQDEPMNPDPCTAEPPRAPVHSFSKVLTASDT 135
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLRKHA ECLP LDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW
Sbjct: 136 STHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 195
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
STFVTSKRLVAGDTFVFLRG+NGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHA
Sbjct: 196 STFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHA 255
Query: 253 VATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVV 310
VATQT+FVVYYKPRTSQFIIS+NKYLEA+ N+F+VGMR KMRFEG+DS E +RFSGT+V
Sbjct: 256 VATQTLFVVYYKPRTSQFIISVNKYLEAM-NRFSVGMRLKMRFEGDDSAETDKRFSGTIV 314
Query: 311 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
GVED SPHW +SKWRSLKVQWDEPA++ RPDRVSPWEIEPFVASA+ VQP + K KRP
Sbjct: 315 GVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKRP 374
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS-- 428
R E P +D SAAS W A L Q+ ++ Q +V AE KR D+ WHH +D +S S
Sbjct: 375 RPPSETPDVDTTSAASVFWDAGLQQA-DMAQKNVLAESKRNDSTGTWHHMQTDMNSKSNS 433
Query: 429 -NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 487
N M R Q++G WL+SP LFQ+A DD+K++SAWP S PH S+ NND +L+
Sbjct: 434 GNAMLRNQTEGSWLSSPHSSCPSHLFQDATDDSKSVSAWPV----SKPHSSRLNNDHVLD 489
Query: 488 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSS-----LTTEGHIISTISAAADS 542
QV+ K ET TS RLFGI+LI+H+ +S EK + +TTEG ST++ D+
Sbjct: 490 QVDKESKVETATSYRLFGIDLIDHSRNSPSVEKASAQAGNAPKVTTEG-CTSTLT-RTDA 547
Query: 543 DGKSDI-AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
SD+ KE+KQEQ QVSPKE+QSKQ C RSRTKVQMQGVAVGRA+DLT L G
Sbjct: 548 GHLSDVPMASSKERKQEQQQVSPKETQSKQIC----RSRTKVQMQGVAVGRAVDLTMLDG 603
Query: 602 YDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
YD LI+ELEEMFDIKGQL R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQD
Sbjct: 604 YDQLINELEEMFDIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQD 663
Query: 662 VKKMSPGSKLPMFSIE 677
VKKMS GSKLP+ S+E
Sbjct: 664 VKKMSCGSKLPISSVE 679
>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 692
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/676 (71%), Positives = 544/676 (80%), Gaps = 22/676 (3%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D+LY + WKACAGPLVDVP+ GQRV+YFPQGHMEQLEASTNQELNQRIPL +LP+KI
Sbjct: 16 SGEDELYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKI 75
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LCRVVN+HL+AEQETDEVYAQITL+PE SQ+EPT DPC A+ PR VHSFSKVLTASDT
Sbjct: 76 LCRVVNVHLLAEQETDEVYAQITLVPESSQDEPTNADPCTAEPPRAPVHSFSKVLTASDT 135
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLRKHATECLP LDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW
Sbjct: 136 STHGGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 195
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
STFVTSKRLVAGDTFVFLRG+NGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHA
Sbjct: 196 STFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHA 255
Query: 253 VATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVV 310
VATQT+FVVYYKPRTSQFII +NKYLEA++ KF+VGMR+KMRFEG+DS E +RFSGT+V
Sbjct: 256 VATQTLFVVYYKPRTSQFIIGVNKYLEAMDKKFSVGMRFKMRFEGDDSAETDKRFSGTIV 315
Query: 311 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
GVED SPHW +SKWRSLKVQWDEPA++ RPDRVSPWEIEPFVASA+ VQP + K KRP
Sbjct: 316 GVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKRP 375
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS-- 428
R E P +D S AS W A L Q+ ++ Q +V AE K DN WHH +D +S S
Sbjct: 376 RPPSETPDVDTTSVASVFWDAGLQQA-DMAQKNVLAESKWNDNTGTWHHMQTDMNSKSNS 434
Query: 429 -NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 487
N M R Q++G WL+SP LFQ+ DD+K +SAWP S PH SK NND +L+
Sbjct: 435 GNTMLRNQTEGSWLSSPHSSCPSHLFQDVTDDSKIVSAWPV----SKPHSSKLNNDHVLD 490
Query: 488 QVETGRKTETGTSCRLFGIELINHATSSAPSEK-----VPVSSLTTEGHIISTISAAADS 542
QV+ K ET TS RLFGI+LI+ + +S EK V V +TTEG ST+S D+
Sbjct: 491 QVDKESKVETATSYRLFGIDLIDPSRNSPSVEKASAQAVNVPKVTTEG-CTSTLS-RTDA 548
Query: 543 DGKSDIA-KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
KSD++ E+KQEQ+QVSPK++QSKQ C RSRTKVQMQGVAVGRA+DLT L G
Sbjct: 549 GHKSDVSMASSMERKQEQLQVSPKDTQSKQIC----RSRTKVQMQGVAVGRAVDLTMLDG 604
Query: 602 YDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
Y LI+ELE+MF+IKGQL R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQD
Sbjct: 605 YGQLINELEDMFNIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQD 664
Query: 662 VKKMSPGSKLPMFSIE 677
VKKMS GSKLP+ S+E
Sbjct: 665 VKKMSCGSKLPISSVE 680
>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
Length = 666
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/662 (69%), Positives = 526/662 (79%), Gaps = 36/662 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELWKA AGPLVDVP GQ V+YFPQGHMEQLEASTNQELNQRIP+ +LP+KILCR+VNIH
Sbjct: 19 ELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVLKLPTKILCRIVNIH 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L+AEQETDEVYAQITL+PE +QNEPT PDP + PRPK+HSF K+LTASDTSTHGGFSV
Sbjct: 79 LLAEQETDEVYAQITLVPESNQNEPTIPDPPTEELPRPKIHSFCKILTASDTSTHGGFSV 138
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
LRKHATECLPPLDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR
Sbjct: 139 LRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 198
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
LVAGDTFVFL GENGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHAVATQT+FV
Sbjct: 199 LVAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVISSQSMHLGVLATASHAVATQTLFV 257
Query: 261 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPH 318
VYYKPRTSQFI+S+NKYL AV+NKFAVGMR++MRFE +DS E +RFSGT+VGVED SPH
Sbjct: 258 VYYKPRTSQFIVSVNKYLSAVSNKFAVGMRFRMRFESDDSAESDKRFSGTIVGVEDISPH 317
Query: 319 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 378
W +SKWRSLKVQWDEP++ITRPDRVSPWEIEPFV+SA+ VQP AK KRPR + E+P
Sbjct: 318 WANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVSSASTATVQPTAAKTKRPRPTSEIPD 377
Query: 379 LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 438
+D SAAS W AR++Q+ ++TQ RI N +N+N R Q++G
Sbjct: 378 VDTTSAASIFWDARMSQT-DMTQ--------RIMNS----------KTNNNATLRNQTEG 418
Query: 439 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETG 498
WL+SPR + L + DD K++SAWP S P S N D +L+QVE K ET
Sbjct: 419 SWLSSPRSSYPSHLLHDTTDDGKSVSAWPV----SQPQSSILNIDRMLDQVEKDNKVETA 474
Query: 499 TSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG-----KSDIAKEFK 553
T+ RLFGI+LI+H+ SA E +P SS G+ ++T +++ KSDI+K
Sbjct: 475 TTYRLFGIDLIDHSKKSAAVE-IP-SSHAVNGNGVTTEVSSSTLSSSDTARKSDISKASF 532
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
E+KQE QVSPKE+QSKQ C +RSRTKVQMQGVAVGRA+DL TL GYD LI ELEE+F
Sbjct: 533 ERKQEPQQVSPKETQSKQIC---SRSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELF 589
Query: 614 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 673
DIKGQL R WEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKM GSKLP+
Sbjct: 590 DIKGQLQHRNTWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMKSGSKLPI 649
Query: 674 FS 675
S
Sbjct: 650 SS 651
>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/665 (68%), Positives = 524/665 (78%), Gaps = 29/665 (4%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D+LY +LWKACAGP V+VP+ GQRV+YFPQGHMEQLE STNQELNQRIPLF+L SKILCR
Sbjct: 13 DELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLSSKILCR 72
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+HL+AEQETDEVYAQITL+PE +Q EPT+PDPCPA+ PRP+VHSF KVLTASDTSTH
Sbjct: 73 VVNVHLLAEQETDEVYAQITLVPESNQTEPTSPDPCPAELPRPRVHSFCKVLTASDTSTH 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLP LDM++STPTQELVAKDL G+EWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 133 GGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQPRRHLLTTGWSTF 192
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGDTFVFLRG NGEL VGVR +A QSSMPSSVISSQSMHLGVLATASHAVAT
Sbjct: 193 VTSKRLVAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVISSQSMHLGVLATASHAVAT 252
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVE 313
QT+FVVYYKPRTSQFI+S+NKYLEA+N K VGMR+KMRFEG++SPE +RFSGT++GVE
Sbjct: 253 QTLFVVYYKPRTSQFIVSVNKYLEAINQKCNVGMRFKMRFEGDESPENDKRFSGTILGVE 312
Query: 314 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
D SPHW +S WRSLKVQWDEPAS RPDRVS WEIE +A QP + KNKRPR +
Sbjct: 313 DISPHWVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPTTSSQPAVIKNKRPRQA 372
Query: 374 MEVPPL-DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 432
EVP L D P AA W A L Q ++TQL V E KR D+ + H +H + SN+N +S
Sbjct: 373 SEVPDLGDTPLAAPTFWDAGLTQC-DMTQLRVMTESKRSDS--SSHMRHHNSKSNNNGIS 429
Query: 433 RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 492
Q++ WL+SP QL+Q+ DDNK+I AWP S PH + NND L+QV+
Sbjct: 430 MNQTEASWLSSP------QLYQDTTDDNKSILAWPI----SKPHSERLNNDHFLDQVDKN 479
Query: 493 -RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 551
K E TS RLFGI+LI+HA + +SL+ E D + +SD++K
Sbjct: 480 INKVEAATSYRLFGIDLIDHARN---------NSLSVENASGVASECKTDVNHESDLSKA 530
Query: 552 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
KE QEQ+ VSPKE+QSKQ C +RS TKVQMQGVAVGRA+DLTTL GYD L+DELE+
Sbjct: 531 SKEWNQEQLLVSPKETQSKQVC---SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEK 587
Query: 612 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
MFDIKGQL R KWE V+TDDEGDMMLVGDDPW EFCNMVKRIFICSSQDV K+S GSKL
Sbjct: 588 MFDIKGQLQHRNKWETVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVHKLSSGSKL 647
Query: 672 PMFSI 676
P+ S+
Sbjct: 648 PISSM 652
>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/667 (68%), Positives = 524/667 (78%), Gaps = 30/667 (4%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D+LY +LWKACAGP V+VP+ GQRV+YFPQGHMEQLE STNQELNQRIPLF+LPSKILCR
Sbjct: 12 DELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPSKILCR 71
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+HL+AEQETDEVYAQITL+PE +Q EP +PDPCPA+ P P+VHSF KVLTASDTSTH
Sbjct: 72 VVNVHLLAEQETDEVYAQITLVPESNQAEPMSPDPCPAELPSPRVHSFCKVLTASDTSTH 131
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLP LDM++STPTQELVAKDL GYEWRFKHIFRGQPRRHLLTTGWS F
Sbjct: 132 GGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRHLLTTGWSNF 191
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGDTFVFLRG NGEL VGVR +A QSSMPSSVISSQSMHLGVLATASHAVAT
Sbjct: 192 VTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGVLATASHAVAT 251
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVE 313
QT+FVVYYKPR SQFI+S+NKYLEA+N K VGMR+K RFEG++SPE +RFSGT+VGVE
Sbjct: 252 QTLFVVYYKPRASQFIVSVNKYLEAINQKCNVGMRFKTRFEGDESPENYKRFSGTIVGVE 311
Query: 314 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
D SPHW +S WRSLKVQWDEPAS RPDRV PWEIEP +AS Q KNKRPR +
Sbjct: 312 DISPHWVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSSQTAAIKNKRPRQA 371
Query: 374 MEVPPL-DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHV-AWHHKHSDFSSNSNFM 431
E+ L D P A W A L QS ++ +LSV AE KR D+ WHH + S++N +
Sbjct: 372 SELADLGDTPLAFPTFWDAGLTQS-DMAKLSVMAEIKRSDSSSHMWHH---NSKSSNNGI 427
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
S Q++ WL+SP QL+ + DD+K+ISAWP S PH + NND L+QV+
Sbjct: 428 SMNQTEASWLSSP-----SQLYHDTTDDSKSISAWPI----SKPHSERLNNDHFLDQVDK 478
Query: 492 G-RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 550
K E TS RLFGI+LI+HA +++ S + S +T+E I D + SDI+K
Sbjct: 479 EINKVEAATSYRLFGIDLIDHARNNSLSAE-NASGITSECKI--------DVNHVSDISK 529
Query: 551 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 610
KE QEQ+Q+SPKE+QSKQ C +RS TKVQMQGVAVGRA+DLTTL GYD L+DELE
Sbjct: 530 ASKEWNQEQLQLSPKETQSKQVC---SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELE 586
Query: 611 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
+MFDIKGQL R KWEIV+TDDEGDMMLVGDDPW EFC MV+RIFI SSQDV K+S GSK
Sbjct: 587 KMFDIKGQLQLRNKWEIVFTDDEGDMMLVGDDPWLEFCKMVRRIFIYSSQDVHKLSSGSK 646
Query: 671 LPMFSIE 677
LP+ S+E
Sbjct: 647 LPISSME 653
>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 764
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/693 (63%), Positives = 524/693 (75%), Gaps = 26/693 (3%)
Query: 4 RLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
R+G +S+ S+ +LW+ACAGPLVDVPK +RV+YFPQGHMEQL+ASTNQ ++QRI
Sbjct: 75 RMGIISEAVSS------QLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRI 128
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSF 123
PLF LPSKILCRVV+ L+AEQETDEVYAQITL PE Q EP +PD CP ++P+ VHSF
Sbjct: 129 PLFNLPSKILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQTVHSF 188
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K+LTASDTSTHGGFSVLRKHA ECLPPLDM+Q+TPTQELVA+DLHGYEWRFKHIFRGQP
Sbjct: 189 CKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQP 248
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGVR LARQQS MPSSVISSQSMHL
Sbjct: 249 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHL 308
Query: 244 GVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
GVLATASHAV TQT+FVVYYKPRTSQFIISLNKYLEAVN FAVGMR+KMRFEGEDSPER
Sbjct: 309 GVLATASHAVTTQTLFVVYYKPRTSQFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPER 368
Query: 304 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
RF+GT+VG+ D SP W +SKWRSLK+QWDEPA+I RP+RVS W+IEPFVASA+ NL QP
Sbjct: 369 RFTGTIVGIGDISPQWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPP 428
Query: 364 LAKNKRPRLSMEVPPLDLPSA----ASAP---WSARLAQSHNLTQLSVTAEDKRIDNHVA 416
+ K KRPR PLDLP A +S P W A + SH LTQL E + ++ V
Sbjct: 429 V-KIKRPR------PLDLPVAENTSSSVPSPFWYAGSSPSHELTQLGGVTEVQSSESQVH 481
Query: 417 WHHKHSDFSSNSNFMSRTQS-----DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSG 471
W K + + N S S +G W +SP V S LFQ+ +D+K +S SG
Sbjct: 482 WPPKPKEINGNVIHNSNCGSSIGRPEGIWSSSPSVNVSLNLFQDLTEDSKTVSTRSILSG 541
Query: 472 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEG 530
++T S+PNN + +QVE G++ E CRLFGI+L N++ ++A E P + ++
Sbjct: 542 YNTSLSSRPNNGLISDQVEKGKRIEASIGCRLFGIDLTNNSKATALLEMSCPSITSSSVK 601
Query: 531 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 590
IS + + AD D++K E+KQ + S KE+Q +QSC S+R+RTKVQMQGVAV
Sbjct: 602 GPISAVVSEADRIQNLDVSKSSNEQKQVVPEASQKETQGRQSCTPSSRTRTKVQMQGVAV 661
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 650
GRA+DLT L GYD LI ELE+MF+IKG+L R KWE+V+TDDEGDMMLVGDDPW EFC M
Sbjct: 662 GRAVDLTALEGYDELISELEKMFEIKGELCPRNKWEVVFTDDEGDMMLVGDDPWQEFCKM 721
Query: 651 VKRIFICSSQDVKKMSPGSKLPMFSIEGFGLFL 683
V++IFI SS++VKKMSP KL S++G G +
Sbjct: 722 VRKIFIYSSEEVKKMSPRCKLSTSSLDGEGTVI 754
>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 669
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/676 (64%), Positives = 513/676 (75%), Gaps = 27/676 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELWK AGPLV++P+ ++V YFPQGHMEQLEASTNQELNQ++PLF LP KILC+VV+
Sbjct: 1 ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLFNLPXKILCQVVDTR 60
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L+AEQ++DEVYAQITL+PE +Q P+T +P + + KVHSF KVLTASDTSTHGGFSV
Sbjct: 61 LLAEQDSDEVYAQITLMPEANQALPSTFEPPLIECRKTKVHSFCKVLTASDTSTHGGFSV 120
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
LRKHATECLPPLDM Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR
Sbjct: 121 LRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 180
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
LVAGD+FVFLRGENGEL VGVR LARQQSSMPSSVISS SMHLGVLATASHAV+TQT FV
Sbjct: 181 LVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFV 240
Query: 261 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 320
VYYKPR SQFI+SL+KY+EA+NNKF VGMR+KMRFEGE+SPERRFSGT+VGV+D SPHW
Sbjct: 241 VYYKPRASQFIVSLSKYMEAMNNKFMVGMRFKMRFEGEESPERRFSGTIVGVDDMSPHWP 300
Query: 321 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 380
+S+WRSL+VQWDE ASI RPDRVSPWEIEPFVA TP++ + KNKRPR PPL+
Sbjct: 301 NSEWRSLRVQWDELASIQRPDRVSPWEIEPFVA-PTPSIPHSISVKNKRPR-----PPLE 354
Query: 381 LPSAASAPWSARL---AQSH-NLTQLSVT-AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 435
+P + ++ + + SH + TQLSV+ AE KR +NH WH+K +D N N +SRT
Sbjct: 355 IPDSDNSTVTTLRHPGSTSHDDRTQLSVSAAELKRFENHATWHYKQTDAGGNGNSVSRTA 414
Query: 436 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAW--------PAHSGHSTPHPSKPNNDTLLE 487
+G WL S SQ Q+ IDD K+ S W AHS TP S +D + +
Sbjct: 415 MEGSWLASSSGCVSQHRLQDLIDDRKSGSVWSTVFPGQLAAHSTCPTPRSSNTKSDQVQD 474
Query: 488 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 547
E G+K E SCRLFGIELINH+ S +E+ +T I +++ S+
Sbjct: 475 LGEKGKKAEASPSCRLFGIELINHSKSPVLTERAADQPNSTPNEI-------TEAEQNSN 527
Query: 548 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
+ K KE+K +QV PKE Q KQ+ TS+RSRTKVQMQG+AVGRA+DLTTL GY LID
Sbjct: 528 LPKISKERKLGLLQVPPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLID 587
Query: 608 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
ELE+MFDIKG+L R KWEIV+TDDEGDMML+GD PW EFCNMV+RI+I SSQDV KM
Sbjct: 588 ELEKMFDIKGELRPRNKWEIVFTDDEGDMMLMGDYPWQEFCNMVRRIYIWSSQDV-KMGS 646
Query: 668 GSKLPMFSIEGFGLFL 683
SKL M ++E G +
Sbjct: 647 VSKLAMSALECEGTVI 662
>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
Length = 695
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/652 (62%), Positives = 498/652 (76%), Gaps = 4/652 (0%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWK CAGPLVDVP+ G++VYYFPQGHMEQLE+STNQELNQ+IPLF LPSKILC
Sbjct: 20 DDLYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLFNLPSKILCS 79
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VV+I L+AEQETDEVYAQITL PE Q EP++PDPC ++P+ VH F K+LTASDTSTH
Sbjct: 80 VVHIRLLAEQETDEVYAQITLHPEADQCEPSSPDPCKPEAPKATVHWFCKILTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDMNQ+TPTQEL+AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTF
Sbjct: 140 GGFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD FVFLRG+NGEL GVR LARQQS +PSSVISSQSMHLGVLATASHA+ T
Sbjct: 200 VTSKRLVAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSVISSQSMHLGVLATASHALMT 259
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+T+FVVY KPRTSQFII L+KYLEA KF++G R++MRFEG++SPERRF+GT+V V D
Sbjct: 260 KTLFVVYSKPRTSQFIIGLSKYLEATKTKFSLGTRFRMRFEGDESPERRFTGTIVEVGDL 319
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR-LSM 374
SP W +SKWRSLKVQWDE A++ RPDRVSPW+IEPFVASA NL QP + K+KRPR + +
Sbjct: 320 SPQWSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAPSNLAQP-MVKSKRPRPVEI 378
Query: 375 EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 434
+ SAAS+ W Q+ L + V E + + V W + + +S+S +R
Sbjct: 379 SSSEVTTNSAASSFWYHSSPQTTELNRGGV-PEVQTSGSQVVWPLRQKESNSSSYSSARV 437
Query: 435 QSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK 494
S+G W +SP V LF+++ + +KN+ A S ++P SKPNN + +QVE G+K
Sbjct: 438 CSEGIWPSSPHVDVPLSLFRDSKESSKNVIAGSVLSSIASPILSKPNNVLIHDQVEKGKK 497
Query: 495 TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
+++ + LFG L N+ ++ P E PV G + A +SD D++K KE
Sbjct: 498 SDS-SGFWLFGCNLSNNTKTTCPQEIEPVFKTMPSGAKGPIPADAFESDQGLDVSKLSKE 556
Query: 555 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 614
+KQ ++ SPKE+Q KQ S R+RTKVQMQGVAVGRA+DLT L GYDHLIDELE+MF+
Sbjct: 557 QKQVILEASPKETQGKQGLTLSTRTRTKVQMQGVAVGRAVDLTALKGYDHLIDELEKMFE 616
Query: 615 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
IKG+L + KW +V+TDDE DMML+GDD W +FC +VK+IFI SS +V+KM+
Sbjct: 617 IKGELRPKNKWAVVFTDDENDMMLMGDDQWPDFCKLVKKIFIYSSDEVQKMN 668
>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 688
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/668 (63%), Positives = 501/668 (75%), Gaps = 19/668 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELW+ACAGPLVD+P+ +RV+YFPQ +ASTN ELN+RIPLF L SKILCR
Sbjct: 25 DDLYMELWRACAGPLVDIPRVDERVFYFPQ------QASTNLELNKRIPLFNLDSKILCR 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V++I +A+ E+DEVYAQITL+PE +QNEP + DPCP + PRP VHSF KVLTASDTSTH
Sbjct: 79 VIHIEPLADHESDEVYAQITLMPESNQNEPKSMDPCPPEPPRPVVHSFCKVLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDM +TPTQ+LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 139 GGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRL AGD+FVFLRG+NGEL VGVR ARQQSSMP SVISSQSMHLGVLATASHAV T
Sbjct: 199 VTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTT 258
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
QT FVVYYKPRT QFIISLNKYLEAVNNKF+VGMR+ M FEGEDSPERRFSGT++G D
Sbjct: 259 QTRFVVYYKPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIGAVDI 318
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SPHW +S WRSL+VQWDE SI RPDRVSPW+IEP +SA L QP+ +KNKRPR +
Sbjct: 319 SPHWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPI-SKNKRPR---Q 374
Query: 376 VPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSR 433
P + + P W + LAQSH+ Q S AE ++ +N+ + HH+ +D SNS+ +SR
Sbjct: 375 PTPAHDGADLTKPTHWDSGLAQSHDGKQCSNAAEGRKGENNESCHHRETDTISNSSCVSR 434
Query: 434 TQSDGEWLTSPRVKFSQQLFQEAIDDNKNI--SAWPAHSGHSTPHPSKPNNDTLLEQVET 491
TQ+D WL+ + + + D+K + S W G T H K ++D +L+ +E+
Sbjct: 435 TQTD-TWLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTSHLVKLSDDQILDPIES 493
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 551
G+K ET SCRLFGI+L NH + S + S T+G IST+S A SD KSD +
Sbjct: 494 GKKGETVASCRLFGIDL-NHLAAEKASSQPSSGSSDTDGR-ISTLS-VAQSDPKSDNLEV 550
Query: 552 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
E+K E Q S KE Q QS + RSRTKV M G+AVGRA+DLT L GYD LIDELE+
Sbjct: 551 SIERKSELSQASLKEIQCNQSSSANTRSRTKVLMHGMAVGRAVDLTILEGYDQLIDELEK 610
Query: 612 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK- 670
MFD++GQL R KWEIVYTDDEGDMMLVGDDPW EF NMV+RIFICS + VK MS GSK
Sbjct: 611 MFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGSKQ 670
Query: 671 LPMFSIEG 678
L +EG
Sbjct: 671 LTSIEVEG 678
>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 799
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/681 (61%), Positives = 502/681 (73%), Gaps = 32/681 (4%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLYRELWK CAGPLVDVP+ G RV+YFPQGHMEQL+AST+QELNQ IP F LP+KI CR
Sbjct: 110 DDLYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCR 169
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVNI L+AEQ+TDEVYA I LLPE Q EPT PDP ++ P+ K HSF K+LTASDTSTH
Sbjct: 170 VVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNISEPPKQKFHSFCKILTASDTSTH 229
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLP LDM Q+TPTQEL AKDLHG+EW+FKHI+RGQPRRHLLTTGWSTF
Sbjct: 230 GGFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTF 289
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V SKRLVAGD FVFLRGE+G+L VGVR LARQQS MPSSVISSQSMHLGVLATASHAV T
Sbjct: 290 VASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMT 349
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+TMF+VYYKPRTSQFI+ LNKYLEAVNNKF++GMR+KMRFEG+DSPERRFSGT+VGV D
Sbjct: 350 RTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERRFSGTIVGVGDV 409
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
S W +S+WRSLKVQWDEPA+I RPDRVS WEIEPFVAS N+ QP + K KR R
Sbjct: 410 SAGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAV-KGKRSR---- 464
Query: 376 VPPLDL-PSAASAPWSARLAQSHNLTQL-SVTAEDKRIDNHVA-WHHKHSDF-------S 425
P D+ SAAS W S+ L+QL + TAE + +N V + D +
Sbjct: 465 --PADVSSSAASGFWYH--GSSNELSQLGAATAEVQSKENQVVPCSLRQKDIINSNPIDA 520
Query: 426 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 485
+NS+ SR + +G W +SP + + LF + +N ++ A SG+ PS+ ++
Sbjct: 521 NNSSISSRVRMEGVWPSSPHLNVTPNLFSDP--NNNSVLARSPISGYLNV-PSRSSDGPT 577
Query: 486 LEQVETGRKTETGTSCRLFGIELINHATS---SAPSEKV---PV-SSLTTEGHIISTISA 538
E VE G+K E C LFG+ L N+ ++ + PSE+ P+ SS+ G S +A
Sbjct: 578 CEHVEDGKKIENSLDCWLFGVNLTNNCSNVIITTPSERELRGPISSSVAPSGPKESIPAA 637
Query: 539 AADSDGKSDIAKEFKEKKQEQV--QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 596
A +++ K Q+Q+ + SP E Q+KQ+ + S R+RTKVQMQGVAVGRA DL
Sbjct: 638 ACETERVQTPNYSLSNKGQKQIISEASPNEWQNKQATVPSMRTRTKVQMQGVAVGRAFDL 697
Query: 597 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
TTL GYD LI+ELE++F+I+G+LH++ KW + +TDDE DMMLVGDDPW EFCNMVKRIFI
Sbjct: 698 TTLSGYDDLIEELEKLFEIRGELHSQDKWAVTFTDDENDMMLVGDDPWPEFCNMVKRIFI 757
Query: 657 CSSQDVKKMSPGSKLPMFSIE 677
CS +D+KKM KLP S E
Sbjct: 758 CSREDLKKMK-CCKLPASSSE 777
>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 722
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/689 (60%), Positives = 499/689 (72%), Gaps = 25/689 (3%)
Query: 9 SQPSSN--SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF 66
SQP DDLYRELWK CAGPLVDVP+ G RV+YFPQGHMEQL+AST+QELNQ IP F
Sbjct: 17 SQPEKGLKDDDLYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQEIPHF 76
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 126
LP+KI CRVVNI L+AEQ+TDEVYA I LLPE Q EPT PDP +++P+ K HSF K+
Sbjct: 77 NLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNVSEAPKQKFHSFCKI 136
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLRKHATECLP LDM QSTPTQEL AKDLHG+EW+FKHI+RGQPRRH
Sbjct: 137 LTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRRH 196
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWSTFV SKRLVAGD FVFLRGE+G+L VGVR LARQQS MPSSVISSQSMHLGVL
Sbjct: 197 LLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVL 256
Query: 247 ATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
ATASHAV T+TMF+VYYKPRTSQFI+ LNKYLEAVNNKF++ MR+KMRFEG+DSPERRFS
Sbjct: 257 ATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSLSMRFKMRFEGDDSPERRFS 316
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP-VLA 365
GT+VGV D S W +S+WRSLKVQWDEPA+I RPDRVS WEIEPFVAS N+ QP V
Sbjct: 317 GTIVGVGDVSAGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAVKG 376
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVA-WHHKHSDF 424
K RP + + SAAS W S+ L+QL AE + +N V + D
Sbjct: 377 KRSRPADVLSSGSI-FNSAASGFWYH--GSSNELSQLGAAAEVQSKENQVVPCSLRQKDI 433
Query: 425 -------SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQE--AIDDNKNISAWPAHSGHSTP 475
++NS+ +R + +G W +SP + + LF + + N +SA SG+
Sbjct: 434 INSNPINANNSSISTRVRMEGVWPSSPHLNATPNLFSDPNNNNSNNGVSARSLISGYPN- 492
Query: 476 HPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATS--SAPSEKV---PVSSLTTEG 530
PS+ ++ + VE G+KTE C LFG+ L N+ ++ + PSE+ P SS+ G
Sbjct: 493 VPSRSSDGPTCDGVEDGKKTENSLDCWLFGVNLTNNCSNVITTPSEREQRGPSSSVVLSG 552
Query: 531 HIISTISAAADSDGKSDIAKEFKEKKQEQV--QVSPKESQSKQSCLTSNRSRTKVQMQGV 588
S +AA +++ K Q+Q+ + SP + Q+KQ+ + S R+RTKVQMQGV
Sbjct: 553 PKESIPAAACETERVQTPNYSLSNKGQKQIISEASPNQWQNKQATVLSMRTRTKVQMQGV 612
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
AVGRA DLTTL GYD LIDELE++F+I+G+L ++ KW + +TDDE DMML GDDPW EFC
Sbjct: 613 AVGRAFDLTTLSGYDDLIDELEKLFEIRGELRSQDKWAVTFTDDENDMMLAGDDPWPEFC 672
Query: 649 NMVKRIFICSSQDVKKMSPGSKLPMFSIE 677
NMVKRIFICS +D+KKM KLP S E
Sbjct: 673 NMVKRIFICSREDLKKMK-CCKLPASSSE 700
>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
Length = 629
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/664 (60%), Positives = 488/664 (73%), Gaps = 64/664 (9%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQ---RIPLFRLP 69
+ + +Y ELWK CAGP+VDVP+ +RV+YFPQGHMEQLEAST Q+LN PLF LP
Sbjct: 2 TTGEHMYGELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTKPLFDLP 61
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
KILCRV+++ L AE++TDEVYAQI L+PE + +EP +PDP P +S RPKVHSFSKVLTA
Sbjct: 62 PKILCRVMDVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPSPPESQRPKVHSFSKVLTA 121
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLT
Sbjct: 122 SDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLT 181
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWSTFVT+KRLVAGDTFVFLRGENGEL VGVR RQQ++MPSSVISS SMHLGVLATA
Sbjct: 182 TGWSTFVTAKRLVAGDTFVFLRGENGELRVGVRRANRQQTNMPSSVISSHSMHLGVLATA 241
Query: 250 SHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
HA T++MF VYYKPRTSQFIISLNKYLEA++NKF+VG+R+KMRFEGEDSPERRFSGTV
Sbjct: 242 CHATQTRSMFTVYYKPRTSQFIISLNKYLEAMSNKFSVGIRFKMRFEGEDSPERRFSGTV 301
Query: 310 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
VGV+D S HWKDS WR L+V WDEPASI+RPD+VSPWEIEPFV S N+ V+ KNKR
Sbjct: 302 VGVKDCSTHWKDSNWRCLEVHWDEPASISRPDKVSPWEIEPFVTSE--NVPHSVMPKNKR 359
Query: 370 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 429
PR EV L AS WS+ L QSH Q +T++
Sbjct: 360 PRHYSEVSALG--KTASNLWSSALTQSHEFAQSCITSQR--------------------- 396
Query: 430 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL--LE 487
SP QQ +++A +D KN S W A +P+ + NN + +E
Sbjct: 397 ------------NSP-----QQCYRDATEDAKN-SDWSA-----SPYSATLNNQMVFPVE 433
Query: 488 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 547
Q +K ET S RLFGI+L++ + + + P + I+ + ++SD KS+
Sbjct: 434 Q----KKPETTASYRLFGIDLLSSSIPATEEKTAPTLPIN-----ITKPTPDSNSDPKSE 484
Query: 548 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
++K +EKKQE Q S KE QSK+ ++S RSRTKVQMQGV VGRA+DLT L GY LID
Sbjct: 485 VSKLSEEKKQEPAQASSKEVQSKE--ISSTRSRTKVQMQGVPVGRAVDLTVLNGYSELID 542
Query: 608 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+LE++FDI+G+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+P
Sbjct: 543 DLEKLFDIEGELKSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 602
Query: 668 GSKL 671
G++L
Sbjct: 603 GNQL 606
>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 693
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/666 (61%), Positives = 492/666 (73%), Gaps = 17/666 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
+DLY ELWKACAGPLV+VP G+RV+YFPQGHMEQLE STNQELN +IP F LP KILCR
Sbjct: 18 EDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCR 77
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVNI L+AE+ETDEVYAQITL PE Q+EP + DP P + R VHSF K+LTASDTSTH
Sbjct: 78 VVNIRLLAEKETDEVYAQITLYPEADQSEPQSADPEPPERTRQTVHSFCKILTASDTSTH 137
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDM+QSTPTQEL AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTF
Sbjct: 138 GGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTF 197
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD FVFLRG+NGEL VGVR ARQQS MPSSVISS SMHLGVLATASHAV T
Sbjct: 198 VTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGVLATASHAVRT 257
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
QT FVVYYKPRTSQFIISLNKYLE V N + VGMR+KMRFEGE+SPERRF+GT+VGV D
Sbjct: 258 QTYFVVYYKPRTSQFIISLNKYLETVKNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDM 317
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SP W DSKWRSLK+QWDEPA+I RP+RVSPWEIEPFV SA+ N P + K+KR R +E
Sbjct: 318 SPQWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPFVPSASLNFTHPAI-KSKRAR-PVE 375
Query: 376 VPPLDLP--SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSR 433
+PP ++ SA S W SH ++QLS T E + +N V W SNS+ +
Sbjct: 376 IPPPEVTSGSAPSGFWLQGSTISHEISQLSGTNEVQSSNNRVVWALGQRKLDSNSSHCNP 435
Query: 434 TQS-DGEWLTSPRVKFSQQLFQEAIDDNKNI-SAWPAHSGHSTPHPSKPNNDTLL-EQVE 490
+ +G W SP + S L+ ++ + + + P S +S+ SKP++D + +Q+E
Sbjct: 436 VANVEGIW-PSPPLNISLNLYPDSTFERELVQQKHPLSSPYSSSVTSKPSSDLIQPDQLE 494
Query: 491 TGRKTETGTSCRLFGIELINHATSSAPSEK-----VPVSSLTTEGHIISTISAAADSDGK 545
G K + CR+FGI+L N+ + E+ + V+ E + + ++ D+
Sbjct: 495 KGSKPDISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNL 554
Query: 546 SDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 605
S +KE +Q ++ K +Q+K S+R+RTKVQMQGVAVGRA+DLTTL GY+ L
Sbjct: 555 SQPSKE----QQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDL 610
Query: 606 IDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
IDELE +F+IKG+L KW IV+TDDE DMMLVGDDPW EFC MVKRIFICSS++VKKM
Sbjct: 611 IDELENVFEIKGELRGINKWSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKM 670
Query: 666 SPGSKL 671
S SK+
Sbjct: 671 SRESKI 676
>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/661 (62%), Positives = 498/661 (75%), Gaps = 55/661 (8%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILCRV 76
LY ELWK C+GPLVDVP+ +RVYYFPQGHMEQLEAST Q +LN PLF LP KILC V
Sbjct: 7 LYDELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 66
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
+N+ L AE++TDEVYAQITL+P ++ + PT+PDP P + RPKVHSFSKVLTASDTSTH
Sbjct: 67 MNVSLQAEKDTDEVYAQITLIPVGTEVDGPTSPDPSPPELQRPKVHSFSKVLTASDTSTH 126
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTF
Sbjct: 127 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 186
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGDTFVFLRGE GEL VGVR RQQSSMPSSVISS SMHLGVLATA HA T
Sbjct: 187 VTSKRLVAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATARHATQT 246
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+TMF+VYYKPRTSQFIISLNKYLEA++NKF+VGMR+KMRFEGEDSPERR+SGTV+GV D
Sbjct: 247 KTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVNDC 306
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR E
Sbjct: 307 SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVTSE--NVPKSVMLKNKRPRQVSE 364
Query: 376 VPPLDLPS-AASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 434
V LD+ AS WS+ L QSH Q +T++
Sbjct: 365 VSALDVGGITASNLWSSVLTQSHEFAQSCITSQ--------------------------- 397
Query: 435 QSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETG 492
W +SP QQ ++A +D K S W ++ +S + SK + ND ++ VE
Sbjct: 398 -----W-SSP-----QQCHRDANEDAKK-SDW-INNSYSVSNVSKDSTLNDQMVSPVEQ- 443
Query: 493 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 552
+K ET T+ RLFGI+L++ + +++ + P+ + IS + + SD KS+I+K
Sbjct: 444 KKPETTTNYRLFGIDLMSSSLAASEEKTAPMRPIN-----ISKPTMDSHSDPKSEISKVS 498
Query: 553 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 612
+EKKQE + SPKE QSKQS +S RSRTKVQMQGV VGRA+DLT L GY+ LID++E++
Sbjct: 499 EEKKQEPAEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLTALKGYNELIDDIEKL 556
Query: 613 FDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 672
FDIKG+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L
Sbjct: 557 FDIKGELQSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLR 616
Query: 673 M 673
M
Sbjct: 617 M 617
>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 638
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/678 (61%), Positives = 499/678 (73%), Gaps = 63/678 (9%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-EL 59
MANR G LY ELWK CAGPLVDVP+ +RVYYFPQGHMEQLEAST Q +L
Sbjct: 1 MANRGGEY---------LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDL 51
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRP 118
N PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RP
Sbjct: 52 NTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRP 111
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR QQSSMPSSVISS
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
SMHLGVLATA HA T+TMF+VYYKPRTSQFIISLNKYLEA++NKF+VGMR+KMRFEGE
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGE 291
Query: 299 DSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
DSPERR+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S N
Sbjct: 292 DSPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--N 349
Query: 359 LVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH 418
+ + V+ KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 350 VPKSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------- 398
Query: 419 HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 478
W +SP QQ ++A +D K S W ++ +S + +
Sbjct: 399 ---------------------W-SSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVA 429
Query: 479 KPN--NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI 536
K + ND ++ VE +K ET + RLFGI+L++ + + + P+ + IS
Sbjct: 430 KDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPIN-----ISKP 483
Query: 537 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 596
+ + SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTKVQMQGV VGRA+DL
Sbjct: 484 TMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDL 541
Query: 597 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
L GY+ LID++E++FDIKG+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI
Sbjct: 542 NALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 601
Query: 657 CSSQDVKKMSPGSKLPMF 674
S ++VKKM+PG++L M
Sbjct: 602 WSKEEVKKMTPGNQLRML 619
>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 641
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/646 (64%), Positives = 488/646 (75%), Gaps = 27/646 (4%)
Query: 51 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP 110
LEASTNQELNQ++PLF LP KILC+VV+ L+AEQ++DEVYAQITL+PE +Q P+T +P
Sbjct: 3 LEASTNQELNQKLPLFNLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPSTFEP 62
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
+ + KVHSF KVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVAKDLHG
Sbjct: 63 PLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHG 122
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR LARQQSS
Sbjct: 123 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSS 182
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMR 290
MPSSVISS SMHLGVLATASHAV+TQT FVVYYKPR SQFI+SL+KY+EA+NNKF VGMR
Sbjct: 183 MPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSLSKYMEAMNNKFMVGMR 242
Query: 291 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
+KMRFEGE+SPERRFSGT+VGV+D SPHW +S+WRSL+VQWDE ASI RPDRVSPWEIEP
Sbjct: 243 FKMRFEGEESPERRFSGTIVGVDDMSPHWPNSEWRSLRVQWDELASIQRPDRVSPWEIEP 302
Query: 351 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL---AQSH-NLTQLSVT- 405
FVA TP++ + KNKRPR PPL++P + ++ + + SH + TQLSV+
Sbjct: 303 FVA-PTPSIPHSISVKNKRPR-----PPLEIPDSDNSTVTTLRHPGSTSHDDRTQLSVSA 356
Query: 406 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 465
AE KR +NH WH+K +D N N +SRT +G WL S SQ Q+ IDD K+ S
Sbjct: 357 AELKRFENHATWHYKQTDAGGNGNSVSRTAMEGSWLASSSGCVSQHRLQDLIDDRKSGSV 416
Query: 466 W--------PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAP 517
W AHS TP S +D + + E G+K E SCRLFGIELINH+ S
Sbjct: 417 WSTVFPGQLAAHSTCPTPRSSNTKSDQVQDLGEKGKKAEASPSCRLFGIELINHSKSPVL 476
Query: 518 SEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN 577
+E+ +T I +++ S++ K KE+K +QV PKE Q KQ+ TS+
Sbjct: 477 TERAADQPNSTPNEI-------TEAEQNSNLPKISKERKLGLLQVPPKEIQHKQNSSTSS 529
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 637
RSRTKVQMQG+AVGRA+DLTTL GY LIDELE+MFDIKG+L R KWEIV+TDDEGDMM
Sbjct: 530 RSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELRPRNKWEIVFTDDEGDMM 589
Query: 638 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGFGLFL 683
L+GD PW EFCNMV+RI+I SSQDV KM SKL M ++E G +
Sbjct: 590 LMGDYPWQEFCNMVRRIYIWSSQDV-KMGSVSKLAMSALECEGTVI 634
>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
Length = 667
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/634 (62%), Positives = 464/634 (73%), Gaps = 48/634 (7%)
Query: 50 QLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD 109
QLEASTNQEL Q+IP F LPSKILCRVV+IHL+AEQETDEVYAQITL PE Q EPT+PD
Sbjct: 66 QLEASTNQELTQQIPKFNLPSKILCRVVHIHLLAEQETDEVYAQITLHPEVDQTEPTSPD 125
Query: 110 PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 169
C + + VHSF K+LTASDTSTHGGFSVLRKHATECLPPLDMNQS PTQELVAKDLH
Sbjct: 126 QCTPEPQKRPVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAKDLH 185
Query: 170 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS 229
GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLR +NGEL VGVR LARQQS
Sbjct: 186 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGELRVGVRRLARQQS 245
Query: 230 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGM 289
MPSSVISSQSMHLGVLATASHAV TQT+FVVYYKPRTSQFII LNKYLEAVN+ F++GM
Sbjct: 246 PMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRTSQFIIGLNKYLEAVNHGFSLGM 305
Query: 290 RYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
R+KMRFEGEDSPERRF GT+VGV DFSP W SKWRSLK+QWDEPA++ RPDRVSPWEIE
Sbjct: 306 RFKMRFEGEDSPERRFMGTIVGVGDFSPEWSGSKWRSLKIQWDEPATVQRPDRVSPWEIE 365
Query: 350 PFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDK 409
PF ASA+ NL Q V K+KRPR P+D TA D
Sbjct: 366 PFAASASVNLPQTV-GKSKRPR------PVD-----------------------TTASDN 395
Query: 410 RIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAH 469
+ N S+ SR +S+G W SP + S LF ++ DDN+ I+
Sbjct: 396 CLLN-------------GSSCSSRVRSEGIWPHSPHMDVSLSLFSDSADDNRTITTQSVI 442
Query: 470 SGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTE 529
SG++ PS+ +N + EQVE G+K E CRLFGI+LI++++++AP EK + L +
Sbjct: 443 SGYAPAFPSRQSNSLVHEQVEKGKKYENSVGCRLFGIDLISNSSTAAPPEKESL-GLKMD 501
Query: 530 GHIISTISAAADSDGKS---DIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQ 586
+ + A D ++ D++K KE+K+ +V PKE+ SK TS R+RTKVQMQ
Sbjct: 502 SNGPRGSAPAVDGTDEAQNVDVSKASKEQKEAASEVMPKETHSKPGT-TSTRTRTKVQMQ 560
Query: 587 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHE 646
GVAVGRA+DLT L GY LI ELEE+F+IKG+L TR KW +V+TDDEGDMMLVGDDPW E
Sbjct: 561 GVAVGRAVDLTALKGYGDLIKELEELFEIKGELSTREKWAVVFTDDEGDMMLVGDDPWRE 620
Query: 647 FCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGFG 680
FC MV++I I SS++ KK+ KL S+EG G
Sbjct: 621 FCKMVRKILIYSSEEAKKLKTRCKLLASSLEGEG 654
>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 636
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/678 (61%), Positives = 498/678 (73%), Gaps = 65/678 (9%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-EL 59
MANR G LY ELWK CAGPLVDVP+ +RVYYFPQGHMEQLEAST Q +L
Sbjct: 1 MANRGGEY---------LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDL 51
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRP 118
N PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RP
Sbjct: 52 NTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRP 111
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR QQSSMPSSVISS
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
SMHLGVLATA HA T+TMF+VYYKPRTSQFIISLNKYLEA++NKF+VGMR+KMRFEGE
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGE 291
Query: 299 DSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
DSPERR+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S N
Sbjct: 292 DSPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--N 349
Query: 359 LVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH 418
+ + V+ KNKRPR EV L + AS WS+ L Q H Q +T++ W
Sbjct: 350 VPKSVMLKNKRPRQVSEVSALGI--TASNLWSSVLTQPHEFAQSCITSQ---------W- 397
Query: 419 HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 478
+SP QQ ++A +D K S W ++ +S + +
Sbjct: 398 -----------------------SSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVA 427
Query: 479 KPN--NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI 536
K + ND ++ VE +K ET + RLFGI+L++ + + + P+ + IS
Sbjct: 428 KDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPIN-----ISKP 481
Query: 537 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 596
+ + SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTKVQMQGV VGRA+DL
Sbjct: 482 TMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDL 539
Query: 597 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
L GY+ LID++E++FDIKG+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI
Sbjct: 540 NALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 599
Query: 657 CSSQDVKKMSPGSKLPMF 674
S ++VKKM+PG++L M
Sbjct: 600 WSKEEVKKMTPGNQLRML 617
>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/686 (58%), Positives = 472/686 (68%), Gaps = 96/686 (13%)
Query: 2 ANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQ 61
N + +P SD L+ ELW+ACAGPLVDVPK +RV+YFPQGHMEQL+ASTNQ ++Q
Sbjct: 4 GNNIRGGLEPGLESDHLFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQ 63
Query: 62 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH 121
RIPLF LPSKILCRVV+ L+AEQETDEVYAQITL PE Q EP +PD CP ++P+ VH
Sbjct: 64 RIPLFNLPSKILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQTVH 123
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K+LTASDTSTHGGFSVLRKHA ECLPPLDM+Q+TPTQELVA+DLHGYEWRFKHIFRG
Sbjct: 124 SFCKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRG 183
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGVR LARQQS MPSSVISSQSM
Sbjct: 184 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSM 243
Query: 242 HLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 301
HLGVLATASHAV TQT+FVVYYKPRTSQFIISLNKYLEAVN FAVGMR+KMRFEGEDSP
Sbjct: 244 HLGVLATASHAVTTQTLFVVYYKPRTSQFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSP 303
Query: 302 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
ERRF+GT+VG+ D SP W +SKWRSLK+QWDEPA+I RP+RVS W+IE
Sbjct: 304 ERRFTGTIVGIGDISPQWSNSKWRSLKIQWDEPATIQRPERVSSWDIE------------ 351
Query: 362 PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKR-IDNHVAWHHK 420
P ASA S NLTQ V + R +D VA +
Sbjct: 352 --------------------PFVASA--------SLNLTQPPVKIKRPRPLDLPVA---E 380
Query: 421 HSDFSSNSNFMSRTQSDGEWL--TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 478
++ S S F W +SP + +Q + +++ WP P P
Sbjct: 381 NTSSSVPSPF---------WYAGSSPSHELTQLGGVTEVQSSESQVHWP-------PKPK 424
Query: 479 KPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA 538
+ N + + CRLFGI+L N++ ++A E +
Sbjct: 425 EINGNQ-----------NSSIGCRLFGIDLTNNSKATALLEMI----------------- 456
Query: 539 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK-VQMQGVAVGRALDLT 597
D++K E+KQ + S KE+Q +QSC S+R+RTK VQMQGVAVGRA+DLT
Sbjct: 457 -----QNLDVSKSSNEQKQVVPEASQKETQGRQSCTPSSRTRTKKVQMQGVAVGRAVDLT 511
Query: 598 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
L GYD LI ELE+MF+IKG+L R KWE+V+TDDEGDMMLVGDDPW EFC MV++IFI
Sbjct: 512 ALEGYDELISELEKMFEIKGELCPRNKWEVVFTDDEGDMMLVGDDPWQEFCKMVRKIFIY 571
Query: 658 SSQDVKKMSPGSKLPMFSIEGFGLFL 683
SS++VKKMSP KL S++G G +
Sbjct: 572 SSEEVKKMSPRCKLSTSSLDGEGTVI 597
>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
Length = 602
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/660 (60%), Positives = 472/660 (71%), Gaps = 71/660 (10%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELWK AGPLVDVP+ +RVYYFPQGHMEQLEAST Q+LN PLF LP KILCRV+
Sbjct: 1 MYEELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLFDLPPKILCRVM 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
N+ L AE++TDEVYAQI L+PE + +EP +PDP P + +PK HSF+KVLTASDTSTHGG
Sbjct: 61 NVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPSPPELQKPKFHSFTKVLTASDTSTHGG 120
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVT
Sbjct: 121 FSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLLTTGWSTFVT 180
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SK+LVAGDTFVFLRGENGEL VGVR RQQSSMPSSVISS SMHLGVLATA HA T++
Sbjct: 181 SKKLVAGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATACHATQTRS 240
Query: 258 MFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
MF VYYKPRTSQFI+SL+KYLEA+N+KF+VGMR+KMRFEG+DSPERRFSGTVVGV+D SP
Sbjct: 241 MFTVYYKPRTSQFILSLHKYLEAMNSKFSVGMRFKMRFEGDDSPERRFSGTVVGVQDCSP 300
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 377
HWKDSKWRSL V WDEPAS TRPD+VSPWE+EPF AS N+ Q V NKR R E+
Sbjct: 301 HWKDSKWRSLIVNWDEPASFTRPDKVSPWEMEPFAASE--NVPQSV---NKRARHVNEIS 355
Query: 378 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 437
L +PS S WS+ L QSH Q +T++ N
Sbjct: 356 ALGVPS--SNFWSSALTQSHEFAQSCITSQRNPPQN------------------------ 389
Query: 438 GEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET 497
S WP P N ++ VE + T
Sbjct: 390 --------------------------SDWPV-------SPYSTLNGQMVFPVEQKKPETT 416
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
SCRLFGI+L++ + + + P+ + I+ + +++D KS+I+K +EKKQ
Sbjct: 417 TASCRLFGIDLMSSSLPAHEEKTAPMRPIN-----ITKPTLDSNADPKSEISKLSEEKKQ 471
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
E Q SPKE QSKQ + S+RSRTKVQMQGV VGRA+DLT + GY LID+LE++FDI+G
Sbjct: 472 EPAQASPKEVQSKQ--INSSRSRTKVQMQGVPVGRAVDLTLINGYVELIDDLEKLFDIEG 529
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 677
+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L + E
Sbjct: 530 ELKSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRILLTE 589
>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 662
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/653 (60%), Positives = 466/653 (71%), Gaps = 27/653 (4%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRV 76
DLY +LWK CAGPLVDVP+QG+RV+YFPQGHMEQL+ASTNQ LNQ IP F LP KILCRV
Sbjct: 8 DLYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHFNLPPKILCRV 67
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
V+I L+AEQETDEVYA+ITLLPE +Q EPT+PDP P ++ + H+FSK+LTASDTSTHG
Sbjct: 68 VHIQLLAEQETDEVYARITLLPESNQEEPTSPDPSPPETQKQVFHTFSKILTASDTSTHG 127
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HATECLP LDM Q+TP+QELVA+DLHG+EW+FKHIFRGQPRRHLLTTGWSTFV
Sbjct: 128 GFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQPRRHLLTTGWSTFV 187
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LVAGD FVFLRGENGEL VGVR +ARQQS MPSSVISSQSMHLGVLATASHA T
Sbjct: 188 TSKKLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHLGVLATASHAFLTS 247
Query: 257 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
TMFVVYYKPRTSQFII +NKYLEA NNKF+VGMR+KMRFE EDSPERRFSGT+VGV D S
Sbjct: 248 TMFVVYYKPRTSQFIIGVNKYLEAENNKFSVGMRFKMRFEVEDSPERRFSGTIVGVGDVS 307
Query: 317 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 376
P W +S+WRSLKVQWDEPA I RP+RVS WEIEPF AS N+ Q L K+KR R +
Sbjct: 308 PGWWNSQWRSLKVQWDEPAIIPRPERVSSWEIEPFAASTALNVTQQ-LVKSKRSRTEVSS 366
Query: 377 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS-NFMSRTQ 435
+ S A A W + T L + E + +N V W + + + N N S+ +
Sbjct: 367 SEIAPNSPALAFW---YRGPQDPTALGSSTEVQSNENPVVWSTRQKEINGNPMNSSSKVR 423
Query: 436 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG-RK 494
+G +SP K LF D KN A PA S S S+P +D + +E R
Sbjct: 424 VEGMRPSSPHSK--PNLFM----DPKNCKAVPAQSTVS----SRPKDDLAHDPMECAKRS 473
Query: 495 TETGTSCRLFGIELINHATSSAP---SEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 551
++ +C +FG+ L N+ T + E++ ++ G S AA +++ +
Sbjct: 474 SQNPMNCWIFGVNLTNNITKNVTLPDKEQLGCPAIIPSGPKDSIPVAACETEAGQNPYYS 533
Query: 552 F--KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
KE KQ SP SQ R+RTKVQMQG+AVGRA+DLT L YD LIDEL
Sbjct: 534 LSNKEHKQNISDGSPSASQRH------TRTRTKVQMQGIAVGRAVDLTVLKDYDDLIDEL 587
Query: 610 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
E+MFDIKG+L +TKW I +TDD DMMLVGDDPW EFC +VKRIFICS +DV
Sbjct: 588 EKMFDIKGELQMQTKWAITFTDDGNDMMLVGDDPWPEFCTVVKRIFICSREDV 640
>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
Length = 644
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/658 (57%), Positives = 477/658 (72%), Gaps = 34/658 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY ELW+ CAGP+VDVP++G+RVYYFPQGHMEQL AS NQE++QR+P F L SK+LCR
Sbjct: 8 DALYHELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSFNLKSKVLCR 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPE-PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
V+N H +AE++ DEVY QITL+PE P EPTTPDP +P+ HSF KVLTASDTST
Sbjct: 68 VINSHFLAEEDNDEVYVQITLMPEAPHVPEPTTPDPLIPQDVKPRFHSFCKVLTASDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLRKHA ECLPPLD+NQ TPTQEL+AKDLH EWRFKHIFRGQPRRHLLTTGWST
Sbjct: 128 HGGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRHLLTTGWST 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD+FVFLRG NG+L VGV+ L RQQSSMPSSV+SSQSMHLGVLATASHAV
Sbjct: 188 FVSSKKLVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGVLATASHAVT 247
Query: 255 TQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TQTMFVVYYKPRT+QFI+ +NKYLEA+ +++AVGMR+KM+FE E +P+RRF GT+VG++D
Sbjct: 248 TQTMFVVYYKPRTTQFIVGVNKYLEALKHEYAVGMRFKMQFEAEGNPDRRFMGTIVGIDD 307
Query: 315 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 374
S WK+S WRSLKV+WDEPA+I RPDRVSPWEI+P+V S LV P KNKR RL
Sbjct: 308 LSSQWKNSAWRSLKVRWDEPAAIARPDRVSPWEIKPYVCSIPNVLVPPTAEKNKRHRLHS 367
Query: 375 EVPPLDLPSA--ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 432
E+ + PS+ ASA W+ L +S + + S+N S
Sbjct: 368 EIKISEQPSSSNASAVWNPSL-RSPQFNTFGINS------------------STNCALAS 408
Query: 433 RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 492
T+S + P + S L E +D ++ W P + N ++ + G
Sbjct: 409 LTESGWQL---PHLNTSGMLVDEP-EDGRSAPTWCGFPCVLAPQFGQGTNQPIVIPTD-G 463
Query: 493 RKTETGTSCRLFGIELINHATSSAPS----EKVPVSSLTTEGHIISTISAAADSDGKSDI 548
RK +T +CRLFGI+L + + S+ + + +S + E +T+ A DSD KS++
Sbjct: 464 RKCDTKKTCRLFGIDLKSSSISTTEARLQLQPAGISCVFAERAPPNTV-PAGDSDQKSEL 522
Query: 549 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 608
+ +FK++ Q +++ KE QSKQSC S RSRTKVQMQGVAVGRA+DLT L GYD L E
Sbjct: 523 SVDFKDQMQGHLRLPLKEVQSKQSC--STRSRTKVQMQGVAVGRAVDLTILKGYDELTKE 580
Query: 609 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
LEEMF+I+G+L +R KW I++TDDEGD ML+GD PW +FCN+V++IFICSSQD+KK++
Sbjct: 581 LEEMFEIQGELQSRQKWGILFTDDEGDTMLMGDYPWQDFCNVVRKIFICSSQDMKKLT 638
>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 584
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/583 (62%), Positives = 430/583 (73%), Gaps = 12/583 (2%)
Query: 4 RLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
R +S DDLY ELW+ACAGPLVD+P+ +RV+YFPQGHMEQLEASTN ELN+RI
Sbjct: 10 RQSCVSAQGCGRDDLYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRI 69
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSF 123
PLF L SKILCRV++I +A+ E+DEVYAQITL+PE +QNEP + DPCP + PRP VHSF
Sbjct: 70 PLFNLDSKILCRVIHIEPLADHESDEVYAQITLMPESNQNEPKSMDPCPPEPPRPVVHSF 129
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
KVLTASDTSTHGGFSVLRKHATECLPPLDM +TPTQ+LVAKDLHGYEWRFKHIFRGQP
Sbjct: 130 CKVLTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQP 189
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWSTFVTSKRL AGD+FVFLRG+NGEL VGVR ARQQSSMP SVISSQSMHL
Sbjct: 190 RRHLLTTGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHL 249
Query: 244 GVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
GVLATASHAV TQT FVVYYKPRT QFIISLNKYLEAVNNKF+VGMR+ M FEGEDSPER
Sbjct: 250 GVLATASHAVTTQTRFVVYYKPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPER 309
Query: 304 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
RFSGT++G D SPHW +S WRSL+VQWDE SI RPDRVSPW+IEP +SA L QP
Sbjct: 310 RFSGTIIGAVDISPHWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPX 369
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKH 421
KNKRPR + P + + P W + LAQSH+ Q S AE ++ +N+ + HH+
Sbjct: 370 F-KNKRPR---QPTPAHDGADLTKPTHWDSGLAQSHDGKQCSNAAEGRKGENNESCHHRE 425
Query: 422 SDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI--SAWPAHSGHSTPHPSK 479
+D SNS+ +SRTQ+D WL+ + + + D+K + S W G T H K
Sbjct: 426 TDTISNSSCVSRTQTD-TWLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTSHLVK 484
Query: 480 PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAA 539
++D +L+ +E+G+K ET SCRLFGI+L NH + S + S T+G IST+S
Sbjct: 485 LSDDQILDPIESGKKGETVASCRLFGIDL-NHLAAEKASSQPSSGSSDTDGR-ISTLS-V 541
Query: 540 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 582
A SD KSD + E+K E Q S KE Q QS + RSRTK
Sbjct: 542 AQSDPKSDNLEVSIERKSELSQASLKEIQCNQSSSANTRSRTK 584
>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/675 (54%), Positives = 442/675 (65%), Gaps = 95/675 (14%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL- 59
MAN SN D LY ELWKACAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ +
Sbjct: 1 MANVDADFRTSRSNDDQLYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVV 60
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK 119
+Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P
Sbjct: 61 DQEIPVFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPT 120
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIF
Sbjct: 121 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 180
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+ G+L VGVR LA+QQS+MP+SVISSQ
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQSTMPASVISSQ 240
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
SM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N F++GMR++MRFEGE+
Sbjct: 241 SMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMVAMKNGFSLGMRFRMRFEGEE 300
Query: 300 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPN 358
SPER F+GT+VG D S W SKWRSL++QWDEP+SI RP++VSPWEIEPF SA TP
Sbjct: 301 SPERIFTGTIVGSGDLSSQWPASKWRSLQIQWDEPSSIPRPNKVSPWEIEPFSPSALTPT 360
Query: 359 LVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH 418
Q +K+KR R P+++ + +A
Sbjct: 361 PTQQ-QSKSKRSR------PIEITGSPAA------------------------------- 382
Query: 419 HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQE-AIDDNKNISAWPAHSGHSTPHP 477
SNF+S E ++P VK LF + A + N N S + SG
Sbjct: 383 ---------SNFLSSFPQSHE--SNPSVKL---LFHDIATERNSNKSVF--SSGLQCKKT 426
Query: 478 SKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTIS 537
P + CRLFG +L TS S +P + +IS S
Sbjct: 427 EAP----------------VTSCCRLFGFDL----TSKPASAPIPCNK-----QLISVDS 461
Query: 538 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 597
+DS K + SPKE + + TS RSR KVQMQG AVGRA+DLT
Sbjct: 462 NISDSTPKC---------QDPNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLT 508
Query: 598 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
L YD LI ELE+MF+I+G+L + KW IV+TDDEGDMMLVGDDPW+EFC M K++FI
Sbjct: 509 LLRSYDELIKELEKMFEIEGELSPKDKWTIVFTDDEGDMMLVGDDPWNEFCKMAKKLFIY 568
Query: 658 SSQDVKKMSPGSKLP 672
S +VKK+S S LP
Sbjct: 569 PSDEVKKLSSKSLLP 583
>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
Length = 640
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/665 (54%), Positives = 455/665 (68%), Gaps = 74/665 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV+VP++ +RVYYFPQGHMEQLEAS +Q L+Q++P F LPSKILC
Sbjct: 16 NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTST
Sbjct: 76 KVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRL AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+
Sbjct: 196 FVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAIT 255
Query: 255 TQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
T T+F V+YKP S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+VGV D
Sbjct: 256 TGTLFSVFYKPSPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIVGVGD 315
Query: 315 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
S W DS+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KRPR
Sbjct: 316 TGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKRPR-- 371
Query: 374 MEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSR 433
P L P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 372 --SPVLSSPTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP------- 418
Query: 434 TQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGR 493
+LF TP P+K E G+
Sbjct: 419 -----------------ELF--------------------TPVPNK----------EYGK 431
Query: 494 KT-ETGTSCRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSDIAKE 551
K E G RLFGI+L++++ E +PV+++++ G + ADSD +S +
Sbjct: 432 KKPENGNGYRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQRSN- 487
Query: 552 FKEKKQEQVQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
+ K V P++S S L S RS TKV MQG+AVGRA+DLT Y L+ +L
Sbjct: 488 INQSKTPTVGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKL 547
Query: 610 EEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
EEMFDIKG+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK++SP
Sbjct: 548 EEMFDIKGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELSPK 607
Query: 669 SKLPM 673
+KLP+
Sbjct: 608 AKLPL 612
>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/678 (54%), Positives = 461/678 (67%), Gaps = 57/678 (8%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
M + G P +D LY+ELW ACAGPLV +P +G+RVYYFPQGHMEQLEAS +Q +
Sbjct: 1 MNHTSGGNPHPGGCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGME 60
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV 120
Q++P F LPSKILC+VVN+ AE ETDEVYAQITLLPEP Q+E T+PDP + R V
Sbjct: 61 QQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTV 120
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
HSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFR
Sbjct: 121 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFR 180
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQS
Sbjct: 181 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQS 240
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
MHLGVLATASHA+AT T+F V+YKPRT S+FI++LNKY+EA N+K +VGMR+KMRFEGE
Sbjct: 241 MHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVNLNKYIEAQNHKLSVGMRFKMRFEGE 300
Query: 299 DSPERRFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+ PERRFSGT+VGV D S W DS+WRSLKV WDEP+SI RP+RVSPW++EP VA+ TP
Sbjct: 301 EVPERRFSGTIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVAT-TP 359
Query: 358 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAW 417
+ QP + +NKRPR S+ LPS + NL+ L + W
Sbjct: 360 SNSQP-MQRNKRPRPSV------LPSPTA-----------NLSALGM------------W 389
Query: 418 HHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHP 477
K S SS ++ +Q + SP + + + N +++ +S + P+
Sbjct: 390 --KPSVESSAFSY-GESQRGRDPYPSPNFSTTAKANSLSFCGNSQVTSVSPNSMYR-PNQ 445
Query: 478 SKPNNDTLLEQVETG---RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIS 534
+ D+ V R+ TG RLFGI+LI++ + S V VS T G+
Sbjct: 446 VESVTDSFAPVVNKDLGERRQGTGIGYRLFGIQLIDNFNAEGTSPVVTVSG--TVGNDRP 503
Query: 535 TISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRAL 594
+S A+SD S+ K QE QS+Q RS TKV MQGVAVGRA+
Sbjct: 504 VVSLEAESDQHSEPEKSCLRSHQEL--------QSRQI-----RSCTKVHMQGVAVGRAV 550
Query: 595 DLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 653
DLT Y+ L+ +LEEMFDI+G+L T KW++VYTD+E DMM VGDDPWHEFC+MVK+
Sbjct: 551 DLTQFERYEDLLRKLEEMFDIEGELSGSTKKWQVVYTDNEDDMMKVGDDPWHEFCSMVKK 610
Query: 654 IFICSSQDVKKMSPGSKL 671
IFI +S++VK++SP KL
Sbjct: 611 IFIYASEEVKRLSPKIKL 628
>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
Length = 671
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/680 (54%), Positives = 464/680 (68%), Gaps = 64/680 (9%)
Query: 9 SQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
S+ S +D LY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS NQ L Q++P F L
Sbjct: 11 SRAGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNL 70
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLT 128
PSKILC+VVNIHL AE ETDEVYAQITLLPE Q+E T+PD + PR VHSF K LT
Sbjct: 71 PSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVHSFCKTLT 130
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLL
Sbjct: 131 ASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLL 190
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQQS+MPSSVISS SMHLGVLAT
Sbjct: 191 TTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLAT 250
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
ASHA++T T+F V+YKPRT S+FI+S+NKYLEA N+K +VGMR+KMRFEG++ PERRFS
Sbjct: 251 ASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERRFS 310
Query: 307 GTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
GT+VGVED S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V++ N QP
Sbjct: 311 GTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPAN-SQPT-Q 368
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 425
+NKR R PP+ LPS +T S+ W +
Sbjct: 369 RNKRSR-----PPI-LPST--------------MTDSSLQG---------IWKSP----A 395
Query: 426 SNSNFMSRTQSDGEWLT-SPRVKFSQQLF----QEAIDDNKNISAWPAHSGHSTPHPSKP 480
+ F R G L SPR + F + NK++ W + +ST +P
Sbjct: 396 DSPPFPYRDPQHGRDLYPSPRFSSTATSFLGFGGNSPASNKSM-YWSSRLENST----EP 450
Query: 481 NNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAA 539
+ LE E+G K + TG CRLFGI+L+ ++ + + P+S + + ++
Sbjct: 451 FSPVALE--ESGEKRQGTGNGCRLFGIQLLENSNAEESLQTAPLSGRVGDDRSVPSLDVE 508
Query: 540 ADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 593
+D +SDI + + ++ SP+ESQS+Q RS TKV MQG+AVGRA
Sbjct: 509 SDQHSEPSNVNRSDIPSVSCDADKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRA 562
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+DLT GY+ L+ +LEEMFDI+G+L T KW +VYTD+E DMM+VGDDPW EFC++V+
Sbjct: 563 VDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVR 622
Query: 653 RIFICSSQDVKKMSPGSKLP 672
++FI + ++VKK+SP LP
Sbjct: 623 KMFIYTPEEVKKLSPKIGLP 642
>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
Length = 645
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/667 (54%), Positives = 456/667 (68%), Gaps = 76/667 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV+VP++ +RVYYFPQGHMEQLEAS +Q L+Q++P F LPSKILC
Sbjct: 19 NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTST
Sbjct: 79 KVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTST 138
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 139 HGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 198
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRL AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+
Sbjct: 199 FVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAIT 258
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPR S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+VGV
Sbjct: 259 TGTLFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIVGV 318
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
D S W DS+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KRPR
Sbjct: 319 GDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKRPR 376
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
P L P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 377 ----SPVLSSPTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP----- 423
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
+LF TP P+K E
Sbjct: 424 -------------------ELF--------------------TPVPNK----------EY 434
Query: 492 GRKT-ETGTSCRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSDIA 549
G+K E G RLFGI+L++++ E +PV+++++ G + ADSD +S +
Sbjct: 435 GKKKPENGNGYRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQRS 491
Query: 550 KEFKEKKQEQVQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
+ K V P++S S L S RS TKV MQG+AVGRA+DLT Y L+
Sbjct: 492 N-INQSKTPTVGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLS 550
Query: 608 ELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK++S
Sbjct: 551 KLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELS 610
Query: 667 PGSKLPM 673
P +KLP+
Sbjct: 611 PKAKLPL 617
>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
Length = 643
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/667 (54%), Positives = 456/667 (68%), Gaps = 76/667 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV+VP++ +RVYYFPQGHMEQLEAS +Q L+Q++P F LPSKILC
Sbjct: 17 NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILC 76
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTST
Sbjct: 77 KVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTST 136
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 137 HGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 196
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRL AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+
Sbjct: 197 FVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAIT 256
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPR S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+VGV
Sbjct: 257 TGTLFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIVGV 316
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
D S W DS+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KRPR
Sbjct: 317 GDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKRPR 374
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
P L P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 375 ----SPVLSSPTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP----- 421
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
+LF TP P+K E
Sbjct: 422 -------------------ELF--------------------TPVPNK----------EY 432
Query: 492 GRKT-ETGTSCRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSDIA 549
G+K E G RLFGI+L++++ E +PV+++++ G + ADSD +S +
Sbjct: 433 GKKKPENGNGYRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQRS 489
Query: 550 KEFKEKKQEQVQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
+ K V P++S S L S RS TKV MQG+AVGRA+DLT Y L+
Sbjct: 490 N-INQSKTPTVGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLS 548
Query: 608 ELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK++S
Sbjct: 549 KLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELS 608
Query: 667 PGSKLPM 673
P +KLP+
Sbjct: 609 PKAKLPL 615
>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
Group]
gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
Length = 678
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/666 (54%), Positives = 453/666 (68%), Gaps = 48/666 (7%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LYRELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LPSKILC+
Sbjct: 21 DALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCK 80
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+ L AE ++DEVYAQI L PE QNE T+P P P + + VHSF K LTASDTSTH
Sbjct: 81 VVNVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA ECLPPLDM Q+ P QELVA+DLHG EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260
Query: 256 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
T+F V+YKPRTSQ F++S NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT++GV
Sbjct: 261 GTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVG 320
Query: 314 DFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF-VASATPNLVQPVLAKNKRPR 371
S W +S WRSLKVQWDEP+ + RPDRVSPWE+EP V+++ P+ P K RP
Sbjct: 321 SMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARPP 380
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
S + P P SA Q + + L T E + S+ N +
Sbjct: 381 ASNSIAPELPPVFGLWKSSAESTQGFSFSGLQRTQE---------------LYPSSPNPI 425
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
+ TS V FS + A+ NK+ WP + + + + +V +
Sbjct: 426 --------FSTSLNVGFSTKNEPSAL-SNKHF-YWPMRETRANSYSAS------ISKVPS 469
Query: 492 GRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 550
+K E + CRLFGIE+ SSA P+++++ G S A+SD S +
Sbjct: 470 EKKQEPSSAGCRLFGIEI-----SSAVEATSPLAAVSGVGQDQPAASVDAESDQLSQPSH 524
Query: 551 EFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
K + + SP E+QS+Q RS TKV MQG+AVGRA+DLT L GYD L +L
Sbjct: 525 ANKSDAPAASSEPSPHETQSRQV-----RSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKL 579
Query: 610 EEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
EEMFDI+G+L + KW++VYTDDE DMMLVGDDPW EFC+MVKRI+I + ++ K+++P
Sbjct: 580 EEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPK 639
Query: 669 SKLPMF 674
SKLP+
Sbjct: 640 SKLPII 645
>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
Length = 684
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/672 (56%), Positives = 462/672 (68%), Gaps = 55/672 (8%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY+ELW ACAGPLV VP++G+RVYYFPQGHMEQLEASTNQ +Q++PLF LP+KILCR
Sbjct: 20 DALYQELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQQMPLFSLPAKILCR 79
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VV++ L AE ETDEVYAQITLLPEP Q E T+PDP + PR VHSF K LTASDTSTH
Sbjct: 80 VVHVQLRAEPETDEVYAQITLLPEPEQGEITSPDPPIPEPPRCTVHSFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA ECLP LDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 140 GGFSVLRRHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SKRLVAGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATASHA++T
Sbjct: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQPSNMPSSVISSHSMHLGVLATASHAIST 259
Query: 256 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
T+F V+YKPRTSQ FIISLNKYLEA N+K +VGMR+KMRFEGED+PERRFSGT++GV
Sbjct: 260 GTLFSVFYKPRTSQSEFIISLNKYLEAKNHKLSVGMRFKMRFEGEDAPERRFSGTIIGVG 319
Query: 314 D-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
D S W DS+WRSLKVQWDEP+SI RP RVSPWE+EP VA A P+ QP ++KR R
Sbjct: 320 DAVSSRWADSEWRSLKVQWDEPSSIPRPVRVSPWELEPLVA-AVPSAPQPT-PRSKRAR- 376
Query: 373 SMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 432
PP LPS P +R +SH ID A+ H S + S
Sbjct: 377 ----PPALLPSTPDIPACSRW-KSH-------------IDAGSAFSHS-SGLQRGLDLYS 417
Query: 433 RTQSDGEWLTSPRVK---FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 489
S + ++ FS + + + N+S W + TP S N +
Sbjct: 418 SANSPTVFANMTKIGSLPFSGT--NASCEISGNLSYWSNRA--ETPAKSFMANS----KR 469
Query: 490 ETG-RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK--- 545
E+G R+ E+G RLFGI+L++++T + S VS G + S DSD +
Sbjct: 470 ESGDRRPESGNGYRLFGIQLVDNSTMAESSPAAAVS-----GGVGEDRSVPEDSDQQSQP 524
Query: 546 SDIAKE----FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
SDI + K + +SP+E QS+Q+ RS TKV +QG+AVGRA+DL+ L
Sbjct: 525 SDIDRSDLPAVSGKPDKYCLMSPQEMQSRQT-----RSCTKVHLQGMAVGRAVDLSRLDC 579
Query: 602 YDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
Y+ L+++LE+MF+I+G+L T KW++VYTDDE D MLVGDDPWHEFC +V++I I + +
Sbjct: 580 YEDLLNKLEQMFNIEGELSGPTKKWQLVYTDDEDDTMLVGDDPWHEFCGIVRKINIYTPE 639
Query: 661 DVKKMSPGSKLP 672
+VK + P S LP
Sbjct: 640 EVKNLVPRSGLP 651
>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/677 (54%), Positives = 463/677 (68%), Gaps = 59/677 (8%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P + +D LY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS NQ L Q++P F LPS
Sbjct: 6 PGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPS 65
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
KILC+VVN+HL AE ETDEVYAQITLLPE Q+E T+PD +SPR VHSF K LTAS
Sbjct: 66 KILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKTLTAS 125
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSVLR+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLLTT
Sbjct: 126 DTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 185
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATAS
Sbjct: 186 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVISSHSMHLGVLATAS 245
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA+AT T+F V+YKPRT S+FI+S+NKYLEA ++K +VGMR+KMRFEG++ PERRFSGT
Sbjct: 246 HAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFSGT 305
Query: 309 VVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+VGVED S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V S P QP +N
Sbjct: 306 IVGVEDNKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV-SNPPTNSQPS-QRN 363
Query: 368 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 427
KR R + +P L S+ W + + + + D H D +
Sbjct: 364 KRSRPPI-LPSTMLDSSLQGVWKSPVESA------PFSYRD---------HQHGRDVYPS 407
Query: 428 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 487
+NF S + + F NK+I W + +ST S +
Sbjct: 408 TNFNS--------TATGFLGFGGNCSA----SNKSI-YWSSRIENSTESFSP------VA 448
Query: 488 QVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLT---TEGHIISTISAAADSD 543
E G K + T CRLFGI+L H S++ E +P+ SL+ + ++ ++ A +D
Sbjct: 449 VKEFGEKRQGTANGCRLFGIQL--HDNSNSNEESLPMVSLSGRVGDDGLLPSLDAESDQH 506
Query: 544 ------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 597
+SD + ++ ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT
Sbjct: 507 SEPSNVNRSDFPSVSCDAEKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRAVDLT 560
Query: 598 TLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
GY+ L+ +LEEMFDI G+L TK W++VYTD+E DMM+VGDDPW EFC++V++IFI
Sbjct: 561 RFDGYEDLLRKLEEMFDINGELCGSTKEWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFI 620
Query: 657 CSSQDVKKMSPGSKLPM 673
++++VKK+SP LP+
Sbjct: 621 YTAEEVKKLSPKIGLPI 637
>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
Length = 678
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/666 (54%), Positives = 453/666 (68%), Gaps = 48/666 (7%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LYRELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LPSKILC+
Sbjct: 21 DALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCK 80
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+ L AE ++DEVYAQI L PE QNE T+P P P + + VHSF K LTASDTSTH
Sbjct: 81 VVNVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA ECLPPLDM Q+ P QELVA+DLHG EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260
Query: 256 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
T+F V+YKPRTSQ F++S NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT++GV
Sbjct: 261 GTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVG 320
Query: 314 DFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF-VASATPNLVQPVLAKNKRPR 371
S W +S WRSLKVQWDEP+ + RPDRVSPWE+EP V+++ P+ P K RP
Sbjct: 321 SMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARPP 380
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
S + P P SA Q + + L T E + S+ N +
Sbjct: 381 ASSSIAPELPPVFGLWKSSAESTQGFSFSGLQRTQE---------------LYPSSPNPI 425
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
+ TS V FS + A+ NK+ WP + + + + +V +
Sbjct: 426 --------FSTSLNVGFSTKNEPSAL-SNKHF-YWPMRETRADSYSAS------ISKVPS 469
Query: 492 GRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 550
+K E + CRLFGIE+ SSA P+++++ G S A+SD S +
Sbjct: 470 EKKQEPSSAGCRLFGIEI-----SSAVEATSPLAAVSGVGQDQLAASVDAESDQLSQPSH 524
Query: 551 EFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
K + + SP E+QS+Q RS TKV MQG+AVGRA+DLT L GYD L +L
Sbjct: 525 ANKSDAPAASSEPSPHETQSRQV-----RSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKL 579
Query: 610 EEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
EEMFDI+G+L + KW++VYTDDE DMMLVGDDPW EFC+MVKRI+I + ++ K+++P
Sbjct: 580 EEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPK 639
Query: 669 SKLPMF 674
SKLP+
Sbjct: 640 SKLPII 645
>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 674
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/686 (53%), Positives = 467/686 (68%), Gaps = 82/686 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+DDLY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS + L Q++P F LPSKILC
Sbjct: 16 NDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQITLLPE Q+E T+PD +SPR K+HSF K LTASDTST
Sbjct: 76 KVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRVKIHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQP+RHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+L AGD F+FLRGENGEL VGVR + RQQS++PSSVISS SMHLGVLATASHA+A
Sbjct: 196 FVSSKKLAAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSHSMHLGVLATASHAIA 255
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+FI+S+NKYLE ++K +VGMR+KMRFEG++ PERRFSGT+VGV
Sbjct: 256 TGTLFSVFYKPRTSRSEFIVSVNKYLEVQSHKLSVGMRFKMRFEGDEIPERRFSGTIVGV 315
Query: 313 ED--FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D S W DS+WRSLKVQWDEP+SI RPDRVS WE+EP V++ N QP +NKR
Sbjct: 316 GDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTTLAN-SQPT-QRNKRA 373
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 430
R PL LPS T D + W K S S++ ++
Sbjct: 374 R------PLILPS---------------------TMPDSSLQG--IW--KSSVESTSFSY 402
Query: 431 MSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL----- 485
Q G + P KF N + + + SG+S+ P+N ++
Sbjct: 403 CDPQQGRGLY---PSPKF-----------NSSATNFIGFSGNSS--VGSPSNKSIYWSNR 446
Query: 486 ----LEQV------ETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIS 534
LE + E G K + TG CRLFGI+L+ ++ + + V +S + +
Sbjct: 447 MENNLESISAIALKEAGEKRQGTGNGCRLFGIQLLENSNAEGNLQTVTLSGRVGDDRSVP 506
Query: 535 TISAAAD------SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGV 588
++ A +D + +SDI + ++ +Q SP+ESQSKQ RS TKV MQG+
Sbjct: 507 SLDAESDQHSEPSNANRSDIPSVSCDAEKSCLQ-SPQESQSKQI-----RSCTKVHMQGM 560
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEF 647
AVGRA+DLT GY+ L+ +LE+MF+IK +L + KW++VYTD+E DMM+VGDDPW EF
Sbjct: 561 AVGRAVDLTRFDGYEDLLRKLEDMFNIKTELCGSLKKWQVVYTDNEDDMMMVGDDPWDEF 620
Query: 648 CNMVKRIFICSSQDVKKMSPGSKLPM 673
C++V++IFI ++++VKK+SP +LPM
Sbjct: 621 CSVVRKIFIYTAEEVKKLSPKIRLPM 646
>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
Length = 672
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/686 (53%), Positives = 459/686 (66%), Gaps = 68/686 (9%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P S D L+RELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PL
Sbjct: 5 GVARGPGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPL 64
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSK 125
F LP KILC+VVN+ L AE ++DEVYAQI L PE QNEPT+PD P + R VHSF K
Sbjct: 65 FNLPPKILCKVVNVELRAETDSDEVYAQIMLQPEAEQNEPTSPDAEPPEPERCNVHSFCK 124
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSVLR+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRR
Sbjct: 125 TLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRR 184
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGV
Sbjct: 185 HLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGV 244
Query: 246 LATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
LATASHA++T T+F V+YKPRT S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPER
Sbjct: 245 LATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPER 304
Query: 304 RFSGTVVGVEDFSPH----WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
RFSGT++G+ + W +S+WRSLKVQWDEP++I RPDRVSPWE+EP A+ P
Sbjct: 305 RFSGTIIGLGSMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPLDAT-NPQP 363
Query: 360 VQPVLAKNKR------PRLSMEVPPLDLPSAASAPWS--ARLAQSHNLTQLSVTAEDKRI 411
QP L +NKR P ++ E+PP+ W A AQ+ + + L T E
Sbjct: 364 PQPPL-RNKRARPPASPSIAPELPPV------FGFWKSPAEPAQAFSFSGLQRTQE---- 412
Query: 412 DNHVAWH-HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS 470
+H + +S FSS+ N V F+ + E N N W
Sbjct: 413 ----LYHSNPNSIFSSSLN----------------VGFNSK--NERSTPNNNHLYWTMRE 450
Query: 471 GHSTPHPSKPNNDTLLEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTE 529
+ + + N + T +K E+ TS CRLFGIE+ SA S V V+S+ +
Sbjct: 451 TRTESYSASIN------KAPTEKKQESATSGCRLFGIEI-----GSAVSPVVTVASVGQD 499
Query: 530 GHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVA 589
++ +D + A + + + SP E++S+Q RS TKV MQG+A
Sbjct: 500 PPPALSVDVESDQLSQPSHANK-TDAPAASSERSPNETESRQV-----RSCTKVIMQGMA 553
Query: 590 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFC 648
VGRA+DLT L GYD L +LEEMFDI G+L KW++VYTDDE DMMLVGDDPW+EFC
Sbjct: 554 VGRAVDLTRLDGYDDLHRKLEEMFDIHGELSANLRKWKVVYTDDEDDMMLVGDDPWNEFC 613
Query: 649 NMVKRIFICSSQDVKKMSPGSKLPMF 674
MVKRI+I S ++ K ++P +KLP+
Sbjct: 614 RMVKRIYIYSYEEAKSLTPKAKLPVI 639
>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
Length = 584
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/661 (55%), Positives = 441/661 (66%), Gaps = 106/661 (16%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
D LY ELWKACAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ + ++ IP+F LP KILC
Sbjct: 7 DQLYMELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVFNLPPKILC 66
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
RV+N+ L AE ETDEVYAQITL PE Q+EPT+ DP + + V SF K+LTASDTST
Sbjct: 67 RVLNVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLTEPAKQTVDSFVKILTASDTST 126
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLRKHATECLPPLDM Q+TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWST
Sbjct: 127 HGGFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 186
Query: 195 FVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FVTSKRLVAGD FVFLRG + G+L VGVR LA+QQS+MP+SVISSQSMHLGVLATASHA
Sbjct: 187 FVTSKRLVAGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLGVLATASHAF 246
Query: 254 ATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
T TMFVV YKPR SQFIIS+NKY+ A+ F +GMR++MRFEGE+SPER F+GT+VG
Sbjct: 247 NTTTMFVVLYKPRISQFIISVNKYMAAMKKGFGIGMRFRMRFEGEESPERIFTGTIVGTG 306
Query: 314 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPRL 372
D SP W SKWRSL+VQWDE +++ RP++VSPWEIEPF+ S T + QP +K+KR R
Sbjct: 307 DLSPQWPASKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQP-YSKSKRSR- 364
Query: 373 SMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 432
P+D PS + S VA SNF+S
Sbjct: 365 -----PID-PSVSEITGSP-----------------------VA-----------SNFLS 384
Query: 433 RTQSDGEWLTSPRVKFSQQLFQE-AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
R E SP +K LFQ+ + + N N + PA S
Sbjct: 385 RFPKSHE--PSPSLKL---LFQDPSSERNSNKTEAPATS--------------------- 418
Query: 492 GRKTETGTSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 550
CRLFG +L + A++ P++K + IS +++ G +
Sbjct: 419 --------CCRLFGFDLKSKPASAPNPNDKQQL------------ISVDSNNTGSA---- 454
Query: 551 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 610
K Q+ P S+ ++ +S RSRTKVQMQG AVGRA+DLT L YD LI ELE
Sbjct: 455 ----KCQD-----PNSSKDQKQQTSSTRSRTKVQMQGTAVGRAVDLTLLRSYDELIRELE 505
Query: 611 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
+MF+I+G+L T+ KW IV+TDDEGDMMLVGDDPW EFC M K++FI SS +VKKMS S
Sbjct: 506 KMFEIEGELRTKDKWAIVFTDDEGDMMLVGDDPWDEFCKMAKKLFIYSSDEVKKMSSKSL 565
Query: 671 L 671
L
Sbjct: 566 L 566
>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/674 (55%), Positives = 461/674 (68%), Gaps = 62/674 (9%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAST-NQELNQRIPLFRLPSKILC 74
D LY+ELW ACAGPLV VP++G+RVYYFPQGHMEQLEAST +Q L+Q++P F LPSKILC
Sbjct: 20 DALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTTHQGLDQQMPSFNLPSKILC 79
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VV++ L AE ETDEVYAQ+TLLPEP Q+E T+PDP + R VHSF K LTASDTST
Sbjct: 80 KVVHVQLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQRCTVHSFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 140 HGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFRGQPRRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATASHA++
Sbjct: 200 FVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSNMPSSVISSHSMHLGVLATASHAIS 259
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+FI+SLNKYLEA N+K +VGMR+KMRFEGE+ PERRFSGT+VGV
Sbjct: 260 TGTLFSVFYKPRTSRSEFIVSLNKYLEARNHKLSVGMRFKMRFEGEEVPERRFSGTIVGV 319
Query: 313 ED--FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D S W DS+WRSLKVQWDEPASI RP+RVS WE+EP VA+A P +QP +NKR
Sbjct: 320 GDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAWELEPLVAAAAPTNLQPA-QRNKRA 378
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH--HKHSDFSSNS 428
R PP+ LPSA + +L+ L + + + H+ D +
Sbjct: 379 R-----PPV-LPSA-----------TPDLSVLGMWKSSVESPSGFPYCDPHRGRDLYPSP 421
Query: 429 NFMSRTQS---DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 485
F S T++ +SP S ++ + S PA + S
Sbjct: 422 KFSSITKTNSFSFSGNSSPAAVSSNSMYWSNRMETATESFAPAVNKESG----------- 470
Query: 486 LEQVETGRKTETGTSCRLFGIELINHAT--SSAP----SEKVPVSSLTTEGHIISTISAA 539
E R T G+ CRLFG +L++++T + P E PV SL E S +
Sbjct: 471 ----EKRRDT--GSGCRLFGFQLLDNSTLEETLPVLTVGEDQPVPSLDVE----SDQHSE 520
Query: 540 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 599
+ +SDI E + ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT
Sbjct: 521 PSNINRSDIPSVSCEPDKLSLR-SPQESQSRQI-----RSCTKVHMQGIAVGRAVDLTRF 574
Query: 600 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
Y+ L+ +LEEMFDI+G+L T W++VYTDDE DMM+VGDDPW EFC+MV++IFI +
Sbjct: 575 DRYEDLLKKLEEMFDIQGELCGLTSIWQVVYTDDEDDMMMVGDDPWLEFCSMVRKIFIYT 634
Query: 659 SQDVKKMSPGSKLP 672
+++VK++SP KLP
Sbjct: 635 AEEVKRLSPKIKLP 648
>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/677 (55%), Positives = 465/677 (68%), Gaps = 59/677 (8%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P + +D LY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS NQ L Q++P F LPS
Sbjct: 6 PGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPS 65
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
KILC+VVN+HL AE ETDEVYAQITLLPE Q+E T+PD +SPR VHSF K LTAS
Sbjct: 66 KILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKTLTAS 125
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSVLR+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLLTT
Sbjct: 126 DTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 185
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQQS+MPSSVISS SMHLGVLATAS
Sbjct: 186 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATAS 245
Query: 251 HAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA+AT T+F V+YKPRTS +FI+S+NKYLEA ++K +VGMR+KMRFEG++ PERRFSGT
Sbjct: 246 HAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGT 305
Query: 309 VVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+VGV D S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V S P QP +N
Sbjct: 306 IVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV-STPPTNPQPS-QRN 363
Query: 368 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 427
KR R PP+ LPS + P S+ + + +A D H D +
Sbjct: 364 KRSR-----PPI-LPS--TMPDSSLQGVWKSPVE---SAPFSYCD-----HQHGRDVYPS 407
Query: 428 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 487
+NF S + F + NK+I W + +ST + + +
Sbjct: 408 TNFNSTATG--------FLGFGGNCYA----SNKSI-YWSSRMENST------ESFSPVA 448
Query: 488 QVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTE-GHIISTISAAADSD-- 543
E G K + T CRLF I+L H S++ E +P+ +L+ G S A+SD
Sbjct: 449 LKEFGEKRQGTANGCRLFRIQL--HDNSNSNEESLPMVTLSGRMGDDGPLPSLDAESDQH 506
Query: 544 ------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 597
+SDI + ++ ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT
Sbjct: 507 SEPSNVNRSDIPSVSCDAEKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRAVDLT 560
Query: 598 TLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
GY+ L+ +LEEMFDI G+L T KW++VYTD+E DMM+VGDDPW EFC++V++IFI
Sbjct: 561 RFDGYEDLLRKLEEMFDITGELCGSTKKWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFI 620
Query: 657 CSSQDVKKMSPGSKLPM 673
++++V+K+SP LP+
Sbjct: 621 YTAEEVRKLSPKIGLPI 637
>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
Length = 739
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/680 (54%), Positives = 460/680 (67%), Gaps = 69/680 (10%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL 73
+SD LYRELW ACAGPLV +P+Q +RVYYFPQGHMEQLEAS +Q L Q++P F LPSKIL
Sbjct: 80 SSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKIL 139
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
C+VVN+ L AE +TDEVYAQITLLPE +QNE T+PDP + R VHSF K LTASDTS
Sbjct: 140 CKVVNVVLRAESDTDEVYAQITLLPESNQNEVTSPDPPLPEPTRCNVHSFCKTLTASDTS 199
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRRHLLTTGWS
Sbjct: 200 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWS 259
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SK+LVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA+
Sbjct: 260 VFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAI 319
Query: 254 ATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+T T+F V+YKPRTS+ F++SLNKYLEA N+K +VGMR+KMRFEGE+ PER FSGT+VG
Sbjct: 320 STGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVG 379
Query: 312 VED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D SP W +S+WRSLKVQWDEP+SI RPD+VS WE+EP VAS P QP +NKRP
Sbjct: 380 LGDNASPGWANSEWRSLKVQWDEPSSILRPDKVSAWELEPLVAS-NPLSTQPT-QRNKRP 437
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV--TAEDKRIDNHVAWHHKHSDFSSNS 428
R P LPS S+P + L + S AE +R + + K S +SNS
Sbjct: 438 R------PTVLPS--SSPDATVLGGWKPTVESSTFSYAEPQRGRDLYS-SPKFSTAASNS 488
Query: 429 ------NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNN 482
+ + S+ W + RV +NI +H + P
Sbjct: 489 LGFNANSSLGAVSSNNYWCNTNRV--------------ENIMDPSSHGANREP------- 527
Query: 483 DTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAA 540
VE + + G CRLFGI+L+ ++ E PVS+ + E ++ I
Sbjct: 528 ------VEKKQNSRNG--CRLFGIQLLGNSNV---DEASPVSTPKMGGEDRLVPPIDTDF 576
Query: 541 DSDG------KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRAL 594
+ +SDI + +SP ESQS+Q RS TKV MQG+AVGRA+
Sbjct: 577 EQHSEPSNIHRSDIPS-ISCDADKSCLISPLESQSRQI-----RSCTKVHMQGIAVGRAV 630
Query: 595 DLTTLVGYDHLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 653
DLT YD L+ +LEEMFDI+G+L + KW++VYTDDE DMMLVGDDPW+EFC+MV++
Sbjct: 631 DLTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRK 690
Query: 654 IFICSSQDVKKMSPGSKLPM 673
IFI ++++VK++SP KLP+
Sbjct: 691 IFIYTTEEVKRLSPKIKLPL 710
>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
[Medicago truncatula]
Length = 670
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/686 (54%), Positives = 464/686 (67%), Gaps = 68/686 (9%)
Query: 7 SLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF 66
S++ S +D LY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS NQ L Q++P F
Sbjct: 4 SITFTGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF 63
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 126
LPSKILC+VVNIHL AE ETDEVYAQITLLPE Q+E T+PD + PR VHSF K
Sbjct: 64 NLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVHSFCKT 123
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRH
Sbjct: 124 LTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRH 183
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLR----GENGELHVGVRCLARQQSSMPSSVISSQSMH 242
LLTTGWS FV+SK+LVAGD F+FLR GENGEL VGVR L RQQS+MPSSVISS SMH
Sbjct: 184 LLTTGWSVFVSSKKLVAGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSVISSHSMH 243
Query: 243 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
LGVLATASHA++T T+F V+YKPRT S+FI+S+NKYLEA N+K +VGMR+KMRFEG++
Sbjct: 244 LGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEV 303
Query: 301 PERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
PERRFSGT+VGVED S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V++ N
Sbjct: 304 PERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPAN- 362
Query: 360 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHH 419
QP +NKR R PP+ LPS T D + W
Sbjct: 363 SQPT-QRNKRSR-----PPI-LPS---------------------TMTDSSLQG--IWKS 392
Query: 420 KHSDFSSNSNFMSRTQSDGEWLT-SPRVKFSQQLF----QEAIDDNKNISAWPAHSGHST 474
+ + F R G L SPR + F + NK++ W + +ST
Sbjct: 393 P----ADSPPFPYRDPQHGRDLYPSPRFSSTATSFLGFGGNSPASNKSM-YWSSRLENST 447
Query: 475 PHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII 533
+P + LE E+G K + TG CRLFGI+L+ ++ + + P+S + +
Sbjct: 448 ----EPFSPVALE--ESGEKRQGTGNGCRLFGIQLLENSNAEESLQTAPLSGRVGDDRSV 501
Query: 534 STISAAADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG 587
++ +D +SDI + + ++ SP+ESQS+Q RS TKV MQG
Sbjct: 502 PSLDVESDQHSEPSNVNRSDIPSVSCDADKSCLR-SPQESQSRQI-----RSCTKVHMQG 555
Query: 588 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHE 646
+AVGRA+DLT GY+ L+ +LEEMFDI+G+L T KW +VYTD+E DMM+VGDDPW E
Sbjct: 556 MAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYTDNEDDMMMVGDDPWLE 615
Query: 647 FCNMVKRIFICSSQDVKKMSPGSKLP 672
FC++V+++FI + ++VKK+SP LP
Sbjct: 616 FCSVVRKMFIYTPEEVKKLSPKIGLP 641
>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
Length = 672
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/673 (52%), Positives = 449/673 (66%), Gaps = 59/673 (8%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S+SD LYRELW ACAGPLV VP+QG+RVYYFPQGHMEQLEAST+Q+L+Q +PLF LPSKI
Sbjct: 12 SSSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKI 71
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LC+VVN+ L AE ++DEVYAQI L PE Q+EP++ DP P + + HSF K LTASDT
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQPETDQSEPSSADPEPHEPEKCNAHSFCKTLTASDT 131
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLR+HA ECLPPLDM Q+ P QELVAKDLH EW F+HIFRGQPRRHLLTTGW
Sbjct: 132 STHGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFRGQPRRHLLTTGW 191
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRG+NG+L VGVR L RQ ++MPSSVISS SMHLGVLATASHA
Sbjct: 192 SVFVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHA 251
Query: 253 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
++T T+F V+YKPRT S+F++S+NKYLEA NNK +VGMR+KMRFEG+++PERRFSGT++
Sbjct: 252 ISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNNKMSVGMRFKMRFEGDEAPERRFSGTII 311
Query: 311 GVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
GV + W DS WRSLKVQWDEP++I RPDRVSPWE+EP VA++ P K R
Sbjct: 312 GVGSMTTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELEPLVATSIQPPQPPARNKRAR 371
Query: 370 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 429
P S + P P AQ+ + + L T E + + + S N
Sbjct: 372 PPASPSIAPEHPPVFGLWKSPGESAQTFSFSGLQRTQE-----LYPSSPNSIFSSSLNIG 426
Query: 430 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 489
F ++ + P + Q + WP + + + +++V
Sbjct: 427 FKTKNE--------PSTLPNNQFY------------WPIRDTRADSYSAS------IDKV 460
Query: 490 ETGRKTE-TGTSCRLFGIELINHATSSAPSEKV-------PVSSLTTEGHIISTISAAAD 541
RK E T CRLFGIE+ + +++P V P +S+ E +S S
Sbjct: 461 PASRKQEPTTAGCRLFGIEIGSAVEATSPVVDVSGACHEQPAASVDIESDQLSQPSHVNK 520
Query: 542 SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
SD + + SP E+QS+Q RS TKV M+G+AVGRA+DLT L G
Sbjct: 521 SDAPAASSDR-----------SPYETQSRQV-----RSCTKVIMEGMAVGRAVDLTRLHG 564
Query: 602 YDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
Y+ L +LEEMFDI+G+L + KW++VYTDDE DMMLVGDDPW EFC+MVK+++I S +
Sbjct: 565 YEDLHQKLEEMFDIQGELSASLKKWKLVYTDDEDDMMLVGDDPWSEFCSMVKKVYIYSYE 624
Query: 661 DVKKMSPGSKLPM 673
+ K ++P +KLP+
Sbjct: 625 EAKHLTPKAKLPV 637
>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/664 (54%), Positives = 453/664 (68%), Gaps = 58/664 (8%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV +P++G+ VYYFPQGHMEQLEAS +Q + ++PLF LPSKILC
Sbjct: 20 NDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMHQGMEPQMPLFNLPSKILC 79
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+ AE ETDEVYAQITLLPEP Q+E T+PDP + R VHSF K LTASDTST
Sbjct: 80 KVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTVHSFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 140 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQSMHLGVLATASHA+A
Sbjct: 200 FVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATASHAIA 259
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+FI+SLNKYLE N+K +VGMR+KMRFEGE+ PERRFSGT+VGV
Sbjct: 260 TGTLFSVFYKPRTSRSEFIVSLNKYLEVRNHKLSVGMRFKMRFEGEEVPERRFSGTIVGV 319
Query: 313 ED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
D S W DS WRSLKVQWDEP+SI RP+RVS WE+EP VA+ TP+ QPV +NKR R
Sbjct: 320 GDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVAT-TPSNSQPV-QRNKRAR 377
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
P +PS + +L+ L + W S S++
Sbjct: 378 ------PYVIPSPTA-----------DLSALGM------------W---KSPVESSALSY 405
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV-- 489
+Q + +SP + ++ N +++ +S H P+ + D+ V
Sbjct: 406 GDSQRGRDLYSSPNFSTTAKVNSLGFRGNSQVASVSHNSMH-WPNRVESVTDSFAPVVNK 464
Query: 490 ETG-RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 548
++G R+ TG +LFGI+L+ ++ + S PV T + + +S A+SD S+
Sbjct: 465 DSGERRQGTGIGYKLFGIQLVENSNTEGTS---PVVVSGTVVNDLPVLSLEAESDQHSEP 521
Query: 549 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 608
K QE QS+Q RS TKV MQGVAVGRA+DLT Y+ L+ +
Sbjct: 522 EKSCLRSSQEL--------QSRQI-----RSCTKVHMQGVAVGRAVDLTQFKRYEDLLRK 568
Query: 609 LEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
LEEMFDI+G+L T KW++VYTD+E DMM VGDDPW+EFC MVK+IFI +S++VK++SP
Sbjct: 569 LEEMFDIEGELSGSTKKWQVVYTDNEDDMMKVGDDPWNEFCGMVKKIFIYTSEEVKRLSP 628
Query: 668 GSKL 671
KL
Sbjct: 629 KIKL 632
>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
Length = 671
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/682 (52%), Positives = 469/682 (68%), Gaps = 59/682 (8%)
Query: 8 LSQPSSN--SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
+ QP + +D LY+ELW ACAGPLV++P++G+RVYYFPQGHMEQLEAS +Q L ++P
Sbjct: 3 IGQPHTGGCNDALYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEPQMPS 62
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSK 125
F LPSKILC+VVN+ AE ETDEVYAQITLLP+P Q+E T+PD + R VHSF K
Sbjct: 63 FDLPSKILCKVVNVQRKAEPETDEVYAQITLLPDPDQSEVTSPDTPLPEPERCTVHSFCK 122
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRR
Sbjct: 123 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRR 182
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQSMHLGV
Sbjct: 183 HLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGV 242
Query: 246 LATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
LATASHA+AT T+F V+YKPRT S+FI+S+NKYLEA ++K +VGMR+KMRFEGE+ PER
Sbjct: 243 LATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPER 302
Query: 304 RFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
RFSGT+VGV D S W DS+WRSLKVQWDEP+SI RPDRVS WE+EP VA+ TP+ QP
Sbjct: 303 RFSGTIVGVGDNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVAT-TPSNSQP 361
Query: 363 VLAKNKRPRLSMEVPPLDLPSAAS-APWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKH 421
V +NKR R S+ D+ S P + A S+ Q +
Sbjct: 362 V-QRNKRARPSVLPSTPDISSLGMWKPQTESTAFSYGDFQ------------------RG 402
Query: 422 SDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN 481
D + NF + +++ + FS N +S +S + P+ +
Sbjct: 403 RDLYPSHNFSTSAKTN-------YLGFS---------GNSPLSGVSPNSLYR-PNRVESV 445
Query: 482 NDTLLEQV--ETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA 538
D+ + + ++G + + +G RLFGI+L+ ++ + S + S + + + + A
Sbjct: 446 TDSFVPVIDKDSGERRQGSGNGYRLFGIQLVGNSNAEETSPLITTSGMVGDDRPVVSFDA 505
Query: 539 AADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 592
+D +S+I E ++ ++ SP+E QS+Q RS TKV MQG+AVGR
Sbjct: 506 ESDQHSEPSNINRSEIPSISCEPEKSCLR-SPQELQSRQI-----RSCTKVHMQGIAVGR 559
Query: 593 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMV 651
A+DLT Y+ L+ +LEEMFDI+G+L + KW++VYTDDE DMM+VGDDPWHEFC+MV
Sbjct: 560 AVDLTRFECYEDLLRKLEEMFDIEGELSGFSKKWQVVYTDDEDDMMMVGDDPWHEFCSMV 619
Query: 652 KRIFICSSQDVKKMSPGSKLPM 673
++IFI +S++VK++SP SKLP+
Sbjct: 620 RKIFIYTSEEVKRLSPKSKLPV 641
>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
Length = 673
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/670 (54%), Positives = 456/670 (68%), Gaps = 53/670 (7%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+RELW ACAGPLV VPK+G+RVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 18 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILC 77
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTST
Sbjct: 78 SVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 137
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 138 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 197
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 198 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 257
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRTS +F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 258 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGI 317
Query: 313 EDF-----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L +N
Sbjct: 318 GSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL-RN 374
Query: 368 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 427
KR R PP A P S L + + +++ + + + S FS++
Sbjct: 375 KRAR-----PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSAS 429
Query: 428 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 487
S+ ++++ P + +Q F ++ D+K S S N T +E
Sbjct: 430 SHVEFNSKNE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKTRVE 469
Query: 488 QVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 546
RK E T CRLFGIE+ SSA E +P ++++ G+ + +S DSD S
Sbjct: 470 -----RKQEPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSDQIS 519
Query: 547 DIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 605
+ K + + SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY L
Sbjct: 520 QPSNGNKSDAPGTSSERSPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYGDL 574
Query: 606 IDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 664
+LEEMFDI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++ K
Sbjct: 575 RSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKL 634
Query: 665 MSPGSKLPMF 674
++P SKLP+
Sbjct: 635 LAPKSKLPVI 644
>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
Length = 669
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/670 (54%), Positives = 456/670 (68%), Gaps = 53/670 (7%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+RELW ACAGPLV VPK+G+RVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 14 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILC 73
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTST
Sbjct: 74 SVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 134 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 194 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 253
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRTS +F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGI 313
Query: 313 EDF-----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L +N
Sbjct: 314 GSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL-RN 370
Query: 368 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 427
KR R PP A P S L + + +++ + + + S FS++
Sbjct: 371 KRAR-----PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSAS 425
Query: 428 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 487
S+ ++++ P + +Q F ++ D+K S S N T +E
Sbjct: 426 SHVEFNSKNE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKTRVE 465
Query: 488 QVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 546
RK E T CRLFGIE+ SSA E +P ++++ G+ + +S DSD S
Sbjct: 466 -----RKQEPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSDQIS 515
Query: 547 DIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 605
+ K + + SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY L
Sbjct: 516 QPSNGNKSDAPGTSSERSPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYGDL 570
Query: 606 IDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 664
+LEEMFDI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++ K
Sbjct: 571 RSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKL 630
Query: 665 MSPGSKLPMF 674
++P SKLP+
Sbjct: 631 LAPKSKLPVI 640
>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/389 (82%), Positives = 346/389 (88%), Gaps = 1/389 (0%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWKACAGPLVDVPK+G+RV+YFPQGHMEQLEASTNQELNQR+PLF LPSKILCR
Sbjct: 15 DDLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCR 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V+N L+AEQETDEVYAQITLLPE Q E T+PDPCP++ PRP VHSF KVLTASDTSTH
Sbjct: 75 VINTQLLAEQETDEVYAQITLLPESDQIETTSPDPCPSEPPRPTVHSFCKVLTASDTSTH 134
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHA+ECLPPLDM Q PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 135 GGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 194
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD+FVFLRGENGEL VGVR +ARQQSSMPSSVISSQSMHLGVLATASHA++T
Sbjct: 195 VTSKRLVAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVLATASHAIST 254
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
T+FVVYYKPRTSQFIISLNKYLEAVNNKFAVGMR+KMRFEGEDSPERRFSGT+VGVEDF
Sbjct: 255 LTLFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRFKMRFEGEDSPERRFSGTIVGVEDF 314
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SPHW DSKWRSLKVQWDEPASI+RPDRVSPWEIEP VAS NL QPV KNKRPR +E
Sbjct: 315 SPHWNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCVASVPANLSQPVQPKNKRPRPPIE 374
Query: 376 VPPLDLPSAAS-APWSARLAQSHNLTQLS 403
+P + + S +PW + S L+ S
Sbjct: 375 IPAFAMEDSKSVSPWPVFVGYSTPLSSKS 403
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 151/222 (68%), Gaps = 31/222 (13%)
Query: 456 AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSS 515
A++D+K++S WP G+STP SK ND + + GRK E TS RLFG +L+N +TSS
Sbjct: 379 AMEDSKSVSPWPVFVGYSTPLSSKSKNDPIPDPSNKGRKYEVPTSYRLFGFDLVNQSTSS 438
Query: 516 A-PSEKVP-----VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQS 569
+ P EKV VS T+G +++ + A DSD +K EQ
Sbjct: 439 SSPIEKVSAQPISVSRGATDGRVLAAL-PAVDSD-----------QKHEQSS-------- 478
Query: 570 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 629
TS RSRTKVQ+QG+AVGRA+DLT + GY LIDELE++FDIKGQLH R KWEIVY
Sbjct: 479 -----TSTRSRTKVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLHPRDKWEIVY 533
Query: 630 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMSPGSKL
Sbjct: 534 TDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGSKL 575
>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
Length = 681
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/669 (53%), Positives = 452/669 (67%), Gaps = 53/669 (7%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LYRELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 24 TDALYRELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILC 83
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+ AE ETDEVYAQITLLPEP NE T+PDP P + + VHSF K LTASDTST
Sbjct: 84 KVVNVQRRAEPETDEVYAQITLLPEPDPNEVTSPDPPPPEPEKCTVHSFCKTLTASDTST 143
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 144 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGE GEL VGVR RQQ++MPSSVISS SMHLGVLATASHA+A
Sbjct: 204 FVSSKKLVAGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHLGVLATASHAIA 263
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F ++YKPRT S+FI+S+NKYLEA +K +VGMR+KMRFEGE+ P+ FSG +VGV
Sbjct: 264 TGTLFSIFYKPRTSRSEFIVSVNKYLEARKHKLSVGMRFKMRFEGEEVPDEGFSGIIVGV 323
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT---PNLVQPVLAKNK 368
ED + W +S+WRSLKVQWDEP+SI RPDRVS WE+EP VA+ T P QP +NK
Sbjct: 324 EDNKTSAWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPPNSQPA-QRNK 382
Query: 369 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 428
R R PP+ LP+ A LSV W S S +
Sbjct: 383 RAR-----PPV-LPTPAP--------------DLSVLG---------MW---KSPVESQA 410
Query: 429 NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNN-----D 483
S +Q + SP KFS + N S+ A +G+S P++ N
Sbjct: 411 FSYSDSQHGRDLYLSP--KFSPATKANPLGFGGN-SSLAAVTGNSMYWPNRGENVMESFA 467
Query: 484 TLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD 543
++ + + ++ TG + +LFGI+L++++ S V +S+ + + ++ A ++
Sbjct: 468 PVVSKESSEKRQGTGNTYKLFGIQLVDNSNIEESSAAVTMSATVGDDRPVPSLDADSEQH 527
Query: 544 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 603
+ ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT YD
Sbjct: 528 SEPSNIPSVSCDAEKSCLRSPQESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFDRYD 582
Query: 604 HLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
L+ LEEMFDI G+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI ++++V
Sbjct: 583 DLLKRLEEMFDIGGELSGATKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTAEEV 642
Query: 663 KKMSPGSKL 671
K++SP KL
Sbjct: 643 KRLSPKIKL 651
>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 660
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/680 (51%), Positives = 440/680 (64%), Gaps = 87/680 (12%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGV 315
Query: 313 -EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR
Sbjct: 316 QENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR 375
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
P LPS A+ P
Sbjct: 376 ------PPGLPSPATGP------------------------------------------- 386
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAID-------DNKNISA------WPAHSGHSTPHPS 478
SDG W + S LF NK+ WP ++ + +
Sbjct: 387 ----SDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIGSAFWPTNADSAAESFA 442
Query: 479 KPNNDTLLEQVETGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHI 532
N+ E+ +T G CRLFG EL+ + ++++ S V V
Sbjct: 443 SAFNNESTEKKQT-----NGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEF 497
Query: 533 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 592
S + + +SDI + ++ ++ SP+ESQS+Q RS TKV MQG AVGR
Sbjct: 498 DSGQQSEPLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGR 551
Query: 593 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMV 651
A+DLT Y+ L +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV
Sbjct: 552 AIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMV 611
Query: 652 KRIFICSSQDVKKMSPGSKL 671
++IFI + ++VKK+SP +KL
Sbjct: 612 RKIFIYTPEEVKKLSPKNKL 631
>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
Length = 665
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/668 (52%), Positives = 449/668 (67%), Gaps = 58/668 (8%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EP +PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPEADQSEPMSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+FI+S+N+YLEA N K AVGMR+KMRFEGE++PE+RFSGT+VGV
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEEAPEKRFSGTIVGV 315
Query: 313 -EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA+ TP+ P +NKRPR
Sbjct: 316 QENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPSAHLPP-QRNKRPR 374
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
P L S +AP VTA+ W + SS F
Sbjct: 375 ------PPGLLSPTTAP------------STPVTADG-------VWKSPADNPSSVPLFS 409
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-GHSTPHPSKPNNDTLLEQVE 490
++ L + F +I + WP H+ G + S NN++ E+ +
Sbjct: 410 PPAKTAAFGLG------GNKSFGVSIGS----AFWPTHADGAAESFASALNNESPTEKKQ 459
Query: 491 TGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDG 544
T G CRLFG EL+ + ++++ S V V S + + +
Sbjct: 460 T-----NGNVCRLFGFELVENMNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSESLNIN 514
Query: 545 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 604
++++ + ++ ++ SP++SQS+Q RS TKV MQG AVGRA+DLT Y+
Sbjct: 515 QANLPSGSGDHEKSSLR-SPQKSQSRQI-----RSCTKVHMQGSAVGRAVDLTRSECYED 568
Query: 605 LIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
L +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VK
Sbjct: 569 LFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 628
Query: 664 KMSPGSKL 671
K+SP +KL
Sbjct: 629 KLSPKNKL 636
>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/668 (52%), Positives = 442/668 (66%), Gaps = 61/668 (9%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRTS +FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGV 315
Query: 313 -EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR
Sbjct: 316 QENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR 375
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
P PS W + ++ S A K + F N
Sbjct: 376 PPGLPSPATGPSGPDGVWKSPADTPSSVPLFSPPA-------------KAATFGHGGN-- 420
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST-PHPSKPNNDTLLEQVE 490
+S G + S + WP ++ + S NN++
Sbjct: 421 ---KSFGVSIGS--------------------AFWPTNADSAAESFASAFNNES------ 451
Query: 491 TGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDG 544
T +K G CRLFG EL+ + ++++ S V V S + +
Sbjct: 452 TEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNIN 511
Query: 545 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 604
+SDI + ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT Y+
Sbjct: 512 QSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYED 565
Query: 605 LIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
L +LEEMFDIKG+L TK W++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VK
Sbjct: 566 LFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 625
Query: 664 KMSPGSKL 671
K+SP +KL
Sbjct: 626 KLSPKNKL 633
>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 353/672 (52%), Positives = 444/672 (66%), Gaps = 66/672 (9%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L ELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCTELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE QNEPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQNEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGV 315
Query: 313 -EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR
Sbjct: 316 QENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR 375
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
P LPS + P VT + W SS F
Sbjct: 376 ------PPGLPSPTTGP------------SAPVTPDG-------VWKSPADTPSSVPLF- 409
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA----WPAHSGHST-PHPSKPNNDTLL 486
SP K + F + + +S WP+H+ + S NN++
Sbjct: 410 -----------SPPAKAA--TFGHGGNKSFGVSIGSAFWPSHADSAAESFASAFNNES-- 454
Query: 487 EQVETGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAA 540
T +K G CRLFG EL+ + ++++ S V V S +
Sbjct: 455 ----TEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEP 510
Query: 541 DSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 600
+ +SDI + + ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT
Sbjct: 511 LNINQSDIPSGSDDPENSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAVDLTRSE 564
Query: 601 GYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 659
Y+ L +LEEMF+IKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI +
Sbjct: 565 CYEDLFKKLEEMFEIKGELLKSTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTP 624
Query: 660 QDVKKMSPGSKL 671
++VKK+SP +KL
Sbjct: 625 EEVKKLSPKNKL 636
>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 348/668 (52%), Positives = 441/668 (66%), Gaps = 61/668 (9%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 QGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRTS +FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGV 315
Query: 313 -EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR
Sbjct: 316 QENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR 375
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
P PS W + ++ S A K + F N
Sbjct: 376 PPGLPSPATGPSGPDGVWKSPADTPSSVPLFSPPA-------------KAATFGHGGN-- 420
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST-PHPSKPNNDTLLEQVE 490
+S G + S + WP ++ + S NN++
Sbjct: 421 ---KSFGVSIGS--------------------AFWPTNADSAAESFASAFNNES------ 451
Query: 491 TGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDG 544
T +K G CRLFG EL+ + ++++ S V V S + +
Sbjct: 452 TEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNIN 511
Query: 545 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 604
+SDI + ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT Y+
Sbjct: 512 QSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYED 565
Query: 605 LIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
L +LEEMFDIKG+L TK W++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VK
Sbjct: 566 LFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 625
Query: 664 KMSPGSKL 671
K+SP +KL
Sbjct: 626 KLSPKNKL 633
>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
Length = 660
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 353/670 (52%), Positives = 447/670 (66%), Gaps = 62/670 (9%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+RELW ACAGPLV VPK+G+RVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 14 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILC 73
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTST
Sbjct: 74 SVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 134 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 194 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 253
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRTS +F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGI 313
Query: 313 EDF-----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
SP W DS W+SLKVQWDEP++I PDRVSPWE+EP AS P QP L +N
Sbjct: 314 GSVPAMSKSP-WADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDAS-NPQPPQPPL-RN 370
Query: 368 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 427
KR R PP A P S L + + +++ + + + S FS++
Sbjct: 371 KRAR-----PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSAS 425
Query: 428 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 487
S+ ++++ P + +Q F ++ D+K S S N +E
Sbjct: 426 SHVEFNSKNE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKARVE 465
Query: 488 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 547
+ ++ T CRLFGIE+ SSA E +P ++++ G+ + +S DSD
Sbjct: 466 R----KQEPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSD---- 512
Query: 548 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRS--RTKVQMQGVAVGRALDLTTLVGYDHL 605
Q+ ++S +S RS KV MQG+AVGRA+DLT L GY L
Sbjct: 513 -----------QISQPSNGNKSDAPGTSSERSPLSPKVIMQGMAVGRAVDLTKLNGYGDL 561
Query: 606 IDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 664
+LEEMFDI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++ K
Sbjct: 562 RSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKL 621
Query: 665 MSPGSKLPMF 674
++P SKLP+
Sbjct: 622 LAPKSKLPVI 631
>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
Length = 654
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 356/698 (51%), Positives = 449/698 (64%), Gaps = 85/698 (12%)
Query: 2 ANRLGSLSQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
AN G + P +++++ LY+ELW ACAGPLV VP++G+RVYYFPQGHMEQLEAST+Q ++
Sbjct: 6 ANHFGGGTHPGASANNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGVD 65
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV 120
Q +P F LP+KILC+V+N+ L AE ETDEVYAQITLLPEP Q E T+PDP + + V
Sbjct: 66 QHLPSFNLPAKILCKVMNVQLRAESETDEVYAQITLLPEPDQGEITSPDPPLPEPEKCTV 125
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVA DLHG EW F+HIFR
Sbjct: 126 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHFRHIFR 185
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQPRRHLLTTGWS FV++K+LVAGD F+FLRG++GEL VGVR L RQ ++MPSSVISS S
Sbjct: 186 GQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSVISSHS 245
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
MHLGVLATASHA+ T T+F V+YKPRTSQ FI+S+NKYLEA N+K +VGMR+KMRFEGE
Sbjct: 246 MHLGVLATASHAIMTGTLFSVFYKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKMRFEGE 305
Query: 299 DSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+ PERRFSGT+VGV D S W DS+WRSLKV WDEP+SI RPDRVSPW++EP VA ATP
Sbjct: 306 EVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLVA-ATP 364
Query: 358 NLVQPVLAKNKR-------------PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 404
QP +NKR P L M P+D PS+ S +R + +LS
Sbjct: 365 TNTQPP-QRNKRARPSVLPSPVQELPALGMWKSPVDSPSSFSYCDPSRGRDLYPSPKLSS 423
Query: 405 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 464
A K + N + T++ ++ + + S
Sbjct: 424 AA-------------KGLGYGENGSMPLSTKT---------------MYWSSQSETCTES 455
Query: 465 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATS----SAPSEK 520
PA +P N L +E L I+ ++S SA E
Sbjct: 456 VAPASE-------KRPANGCRLFGIE------------LLDCPTIDESSSVAMPSAVVED 496
Query: 521 VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR 580
PV SL DSD S+ + E + S + + QS RS
Sbjct: 497 QPVPSLNV------------DSDRNSEPSNPIPSVSCEPEKSSLRSTHESQS--KQIRSC 542
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLV 639
TKV MQG AVGRA+DLT L Y+ L+ +LE MF+I+G+L T KW++VYTDDE DMM+V
Sbjct: 543 TKVHMQGKAVGRAVDLTRLDSYEDLLKKLEVMFEIEGELRGSTKKWQVVYTDDEDDMMMV 602
Query: 640 GDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 677
GDDPWH FC+MV++I++ ++++ KK+SP KLP+ ++
Sbjct: 603 GDDPWHGFCSMVRKIYVYTAEEAKKLSPKIKLPVVDVK 640
>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
Length = 677
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 358/673 (53%), Positives = 448/673 (66%), Gaps = 57/673 (8%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D L+RELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LP KI
Sbjct: 12 SAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPHKI 71
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LC+VVN+ L AE ++DEVYAQI L P+ Q+EPT+PDP P + R +HSF K LTASDT
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHSFCKTLTASDT 131
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLR+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGW
Sbjct: 132 STHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 191
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA
Sbjct: 192 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHA 251
Query: 253 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
++T T+F V+YKPRT S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERRFSGT++
Sbjct: 252 ISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSGTII 311
Query: 311 GV----EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA- 365
G+ + + W +S+WRSLKVQWDEP++I RPDRVSPWE+EP + P QP L
Sbjct: 312 GMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEP-LDRTNPQPPQPPLRN 370
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 425
K RP S + P P A AQ+ + + L T E +H
Sbjct: 371 KRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFSGLQRTQE---------LYHSSPSSM 421
Query: 426 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 485
+S+ V F+ + E N N W + + + N
Sbjct: 422 FSSSL--------------NVGFNPKY--EGPTPNTNHLYWTMRETRTESYSASIN---- 461
Query: 486 LEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGH----IISTISAAA 540
+ T +K E+ TS CRLFGIE+ + A S PV ++ + GH ++ A +
Sbjct: 462 --KAPTEKKQESTTSGCRLFGIEIGSSAVS-------PVVTVASVGHDPPPPALSVDAES 512
Query: 541 DSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 600
D + A + + SP E++S+Q+ RS TKV MQGVAVGRA+DLT L
Sbjct: 513 DQLSQPSHANKATDAPAASSDRSPNETESRQA-----RSCTKVIMQGVAVGRAVDLTRLD 567
Query: 601 GYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 659
GYD L +LEEMFDI G+L + KW+++YTDDE DMMLVGDDPW EFC MVKRI+I S
Sbjct: 568 GYDDLRRKLEEMFDIPGELSASLKKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSY 627
Query: 660 QDVKKMSPGSKLP 672
++ K ++P +KLP
Sbjct: 628 EEAKSLTPKAKLP 640
>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 590
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 341/580 (58%), Positives = 415/580 (71%), Gaps = 17/580 (2%)
Query: 102 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 161
Q+EP + DP P + R V F K+LTASDTSTHGGFSVLRKHA ECLPPLDM+QSTPTQ
Sbjct: 1 QSEPQSADPEPPERTRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQ 60
Query: 162 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 221
EL AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGV
Sbjct: 61 ELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGV 120
Query: 222 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV 281
R ARQQS MPSSVISS SMHLGVLATASHAV TQT FVVYYKPRTSQFIISLNKYLE V
Sbjct: 121 RRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQFIISLNKYLETV 180
Query: 282 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 341
N + VGMR+KMRFEGE+SPERRF+GT+VGV D SP W DSKWRSLK+QWDEPA+I RP+
Sbjct: 181 KNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDMSPQWSDSKWRSLKIQWDEPATIQRPE 240
Query: 342 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP--SAASAPWSARLAQSHNL 399
RVSPWEIEPFV SA+ N P + K+KR R +E+PP ++ SA S W SH +
Sbjct: 241 RVSPWEIEPFVPSASLNFTHPAI-KSKRAR-PVEIPPPEVTSGSAPSGFWLQGSTISHEI 298
Query: 400 TQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWLTSPRVKFSQQLFQEAID 458
+QLS T E + +N V W SNS+ + + +G W SP + S L+ ++
Sbjct: 299 SQLSGTNEVQSSNNRVVWALGQRKLDSNSSHCNPVANVEGIW-PSPPLNISLNLYPDSTF 357
Query: 459 DNKNI-SAWPAHSGHSTPHPSKPNNDTLL-EQVETGRKTETGTSCRLFGIELINHATSSA 516
+ + + P S +S+ SKP++D + +Q+E G K + CR+FGI+L N+ +
Sbjct: 358 ERELVQQKHPLSSPYSSSVTSKPSSDLIQPDQLEKGSKPDISLGCRIFGIDLKNNCSIVP 417
Query: 517 PSEK-----VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ 571
E+ + V+ E + + ++ D+ S +KE +Q ++ K +Q+K
Sbjct: 418 TLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSKE----QQLSTELLTKGTQTKH 473
Query: 572 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTD 631
S+R+RTKVQMQGVAVGRA+DLTTL GY+ LIDELE +F+IKG+L KW IV+TD
Sbjct: 474 ISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTD 533
Query: 632 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
DE DMMLVGDDPW EFC MVKRIFICSS++VKKMS SK+
Sbjct: 534 DENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKMSRESKI 573
>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
Length = 676
Score = 623 bits (1607), Expect = e-175, Method: Compositional matrix adjust.
Identities = 355/673 (52%), Positives = 445/673 (66%), Gaps = 58/673 (8%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D L+RELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LP KI
Sbjct: 12 SAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPHKI 71
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LC+VVN+ L AE ++DEVYAQI L P+ Q+EPT+PDP P + R +HSF K LTASDT
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHSFCKTLTASDT 131
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHG SVLR+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGW
Sbjct: 132 STHG-LSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 190
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA
Sbjct: 191 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHA 250
Query: 253 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
++T T+F V+YKPRT S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERRFSG ++
Sbjct: 251 ISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSGIII 310
Query: 311 GV----EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL-A 365
G+ + + W +S+WRSLKVQWDEP++I RPDRVSPWE+EP + P QP L
Sbjct: 311 GMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEP-LNRTNPQPPQPPLRN 369
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 425
K RP S + P P A AQ+ + + L T E +H
Sbjct: 370 KRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFSGLQRTQE---------LYHSSPSSM 420
Query: 426 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 485
+S+ V F+ + E N N W + + + N
Sbjct: 421 FSSSL--------------NVGFNPKY--EGPTPNTNHLYWTMRETRTESYSASIN---- 460
Query: 486 LEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGH----IISTISAAA 540
+ T +K E+ TS CRLFGIE+ + A S PV ++ + GH ++ A +
Sbjct: 461 --KAPTEKKQESTTSGCRLFGIEIGSSAVS-------PVVTVASVGHDPPPPALSVDAES 511
Query: 541 DSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 600
D + A + + SP E++S+Q+ RS TKV MQGVAVGRA+DLT L
Sbjct: 512 DQLSQPSHANKATDAPAASSDRSPNETESRQA-----RSCTKVIMQGVAVGRAVDLTRLD 566
Query: 601 GYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 659
GYD L +LEEMFDI G+L + KW+++YTDDE DMMLVGDDPW EFC MVKRI+I S
Sbjct: 567 GYDDLRRKLEEMFDIPGELSASLNKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSY 626
Query: 660 QDVKKMSPGSKLP 672
++ K ++P +KLP
Sbjct: 627 EEAKSLTPKAKLP 639
>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
Length = 693
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 340/674 (50%), Positives = 427/674 (63%), Gaps = 75/674 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+ ELW ACAGPL+ VP+QG+RVYYFPQGH+EQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 68 SDALFHELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMFNLPSKILC 127
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L E ++DEVYAQI L P+ Q+E T+ P P + R +HSF K LTASDTST
Sbjct: 128 SVVNVELRTEADSDEVYAQIMLQPQDEQSELTSAGP-PQELERGTIHSFCKTLTASDTST 186
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 187 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGWSV 246
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRG NGEL VGVR RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 247 FVSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHLGVLATASHAIS 306
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+F++S+NKYLEA +VGMR+KM+FEG+++ ERRFSGT+VG+
Sbjct: 307 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNMSVGMRFKMKFEGDEALERRFSGTIVGM 366
Query: 313 EDF----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 368
S W DS W+SLKVQWDEP+SI RPDRVS WE+EP + SA P +P L +NK
Sbjct: 367 GSTPTMPSSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEP-LDSANPQTPEPPL-RNK 424
Query: 369 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 428
R R L S + P D N
Sbjct: 425 RARA--------LASPSVVP----------------------------------DLPPNF 442
Query: 429 NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS----AWPAHSGHSTPHPSKPNNDT 484
+ L+ + +++LF +I + N+ WP + + N
Sbjct: 443 GLWKSPSEPSQTLSFSEPQRARELFPTSIFSSTNVMFDQFYWPGRETKDGSYAASTN--- 499
Query: 485 LLEQVETGRKTETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADS 542
+V RK E T+ CRLFGIE+ SS E PV + + H + S DS
Sbjct: 500 ---KVTAERKHEPTTTGGCRLFGIEI-----SSTVEETQPVVTASVGDHDQTAASVDMDS 551
Query: 543 DGKSDIAK-EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
S + + + + E+QS+Q RS TKV M+G+AVGRA+DL L G
Sbjct: 552 SVLSQPSNINNSDAPAGSSERALLETQSRQV-----RSCTKVIMKGMAVGRAVDLARLDG 606
Query: 602 YDHLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
Y L +LEEMFDI G+L T +W++VY DDE DMMLVGDDPW EFC MVKRI+I S +
Sbjct: 607 YGDLHRKLEEMFDIHGELCSTLKRWQVVYADDEDDMMLVGDDPWDEFCGMVKRIYIYSYE 666
Query: 661 DVKKMSPGSKLPMF 674
+ K+++P +K P+
Sbjct: 667 EAKQLAPKAKTPVI 680
>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 310/372 (83%), Positives = 333/372 (89%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWKACAGPLVDVPK+G+RV+YFPQGHMEQLEASTNQELNQR+PLF LPSKILCR
Sbjct: 1 DDLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCR 60
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V++ L+AEQ+TDEVYAQITL+PE Q EPT+PD ++ PRP VHSF KVLTASDTSTH
Sbjct: 61 VIHTQLLAEQDTDEVYAQITLIPESDQIEPTSPDSSSSEPPRPTVHSFCKVLTASDTSTH 120
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDM Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 121 GGFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 180
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD+FVFLRGENGEL VGVR +A QQSSMPSSVISSQSMHLGVLATASHAV+T
Sbjct: 181 VTSKRLVAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVST 240
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
T+FVVYYKPRTSQFIISLNKYLEAV+NKF VGMR+KMRFEGEDSP+RRFSGT+VGVEDF
Sbjct: 241 LTLFVVYYKPRTSQFIISLNKYLEAVSNKFVVGMRFKMRFEGEDSPDRRFSGTIVGVEDF 300
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SPHW DSKWRSLKVQWDEPA I RPDRVSPWEIEP VAS NL QPV KNKRPR E
Sbjct: 301 SPHWNDSKWRSLKVQWDEPAPIPRPDRVSPWEIEPCVASVPTNLSQPVTQKNKRPRPPFE 360
Query: 376 VPPLDLPSAASA 387
+P L + S+
Sbjct: 361 IPALGYSTPLSS 372
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 144/195 (73%), Gaps = 22/195 (11%)
Query: 471 GHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEG 530
G+STP SK ND +L+ + GRK+E TS RLFGI+L+NH++SS P E VP ++
Sbjct: 365 GYSTPLSSKSKNDAILDPSDKGRKSEVPTSYRLFGIDLVNHSSSSTPIE-VPAQLMS--- 420
Query: 531 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 590
I ++S KE+K EQ+Q SPKE QSKQS TS RSRTKVQMQG+AV
Sbjct: 421 --ICSVS---------------KEQKPEQLQKSPKEIQSKQSS-TSTRSRTKVQMQGIAV 462
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 650
GRA+DLT L GY LIDELE++FDIKGQLH R KWEIVYTDDEGDMMLVGDDPW EFCNM
Sbjct: 463 GRAVDLTMLKGYSQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNM 522
Query: 651 VKRIFICSSQDVKKM 665
V+RI+ICSSQDVK+M
Sbjct: 523 VRRIYICSSQDVKRM 537
>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
Length = 695
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 337/689 (48%), Positives = 448/689 (65%), Gaps = 51/689 (7%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCR 75
+L+ ELW+ACAGPLV+VP++ +RV+YF QGH+EQL+ T+ L ++I +F++P KILC+
Sbjct: 10 ELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCK 69
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTST
Sbjct: 70 VVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTST 129
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 130 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 189
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 190 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 249
Query: 255 TQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T ++F+VYY+PR SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+VG
Sbjct: 250 TNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGE 309
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA--KNKRP 370
D S W S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ + KNKRP
Sbjct: 310 GDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNKRP 368
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSNSN 429
R E L A W + + Q H T + ++E I H V W +H + + S+
Sbjct: 369 REPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAVSS 427
Query: 430 FMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP- 477
+ + E WL SP + + SQ++FQ + I+ WPA S + P
Sbjct: 428 SVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEEPT 486
Query: 478 SKPNNDTLL------EQVETGRKTETGTS----CRLFGIELINHATSSAPSEKVPVSSLT 527
SK +++T E K G RLFG++L+ + +S+ T
Sbjct: 487 SKLSSNTAACGYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMKCTS---------ISTTT 537
Query: 528 TEGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCLTSNRSRTK 582
+ + A+A G + + + F + +E + SP+E QS Q+ + R+R K
Sbjct: 538 DDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN--YTARTRIK 595
Query: 583 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 642
VQM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEGD M VGDD
Sbjct: 596 VQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEGDTMEVGDD 652
Query: 643 PWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
PW EFC MV++I + +D KK+ P KL
Sbjct: 653 PWLEFCQMVRKIVLYPIEDEKKIEPHPKL 681
>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 699
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 336/695 (48%), Positives = 448/695 (64%), Gaps = 63/695 (9%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCR 75
+L+ ELW+ACAGPLV+VP++ +RV+YF QGH+EQL+ T+ L ++I +F++P KILC+
Sbjct: 14 ELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCK 73
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTST
Sbjct: 74 VVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 134 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 194 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 253
Query: 255 TQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T ++F+VYY+PR SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+VG
Sbjct: 254 TNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGE 313
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA--KNKRP 370
D S W S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ + KNKRP
Sbjct: 314 GDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNKRP 372
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSNSN 429
R E L A W + + Q H T + ++E I H V W +H + + S+
Sbjct: 373 REPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAVSS 431
Query: 430 FMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 478
+ + E WL SP + + SQ++FQ + I+ WPA S + P+
Sbjct: 432 SVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEEPT 490
Query: 479 K-----------------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV 521
PN ++E G+K RLFG++L+ +
Sbjct: 491 SKLSSNTAACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS-------- 536
Query: 522 PVSSLTTEGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCLTS 576
+S+ T + + A+A G + + + F + +E + SP+E QS Q+ +
Sbjct: 537 -ISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN--YT 593
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 636
R+R KVQM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEGD
Sbjct: 594 ARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEGDT 650
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
M VGDDPW EFC MV++I + +D KK+ P KL
Sbjct: 651 MEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 685
>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
Length = 686
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 334/680 (49%), Positives = 442/680 (65%), Gaps = 47/680 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
++L+ ELW+ACAGPLV++P+ +RV+YF QGH+EQL+ T+ L ++I +F++P+KILC
Sbjct: 10 EELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILC 69
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+VVN+ L AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTS
Sbjct: 70 KVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTS 129
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWS
Sbjct: 130 THGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWS 189
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
TFVTSK+L+AGD FV+LR E G+ VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 190 TFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAI 249
Query: 254 ATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T ++F+VYY+PR SQ+I+ LNKYLE+ F VGMR+KM FEG+D P ++FSGTVV
Sbjct: 250 RTHSIFLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVD 309
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKR 369
D SP W+ S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KNKR
Sbjct: 310 KGDLSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKNKR 368
Query: 370 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 429
PR + E + A W + + H T +S ++E K + VAW + + +S+ S+
Sbjct: 369 PRETAEGLDIHALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAMSS 424
Query: 430 FMSRTQS-DGEWLTS-------PRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP-SK 479
+ + + G W P + + SQ+LFQ +D + + WP S + P SK
Sbjct: 425 SICQNSAVTGSWFKGFNSSGSLPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPSSK 483
Query: 480 PNNDTLLEQVET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 527
+ +T L +T K E G RLFG+ LINHA SSA ++K V +
Sbjct: 484 LSCNTALCSYQTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGAGE 542
Query: 528 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG 587
T + DS S + K+ V SP+E QS QSC S RSR KVQM G
Sbjct: 543 TSARAAGSFE---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQMHG 593
Query: 588 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDPWH 645
V RA+DL L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG PW
Sbjct: 594 NDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVPWQ 652
Query: 646 EFCNMVKRIFICSSQDVKKM 665
EFC MV++I I S D M
Sbjct: 653 EFCQMVRKIVIHSIGDRGHM 672
>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 686
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 334/680 (49%), Positives = 443/680 (65%), Gaps = 47/680 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
++L+ ELW+ACAGPLV++P+ +RV+YF QGH+EQL+ T+ L ++I +F++P+KILC
Sbjct: 10 EELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILC 69
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+VVN+ L AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTS
Sbjct: 70 KVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTS 129
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWS
Sbjct: 130 THGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWS 189
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
TFVTSK+L+AGD FV+LR E G+ VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 190 TFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAI 249
Query: 254 ATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T ++F+VYY+PR SQ+I+ LNKYLE+ F VGMR+KM FEG+D P ++FSGTVV
Sbjct: 250 RTHSIFLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVD 309
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKR 369
D SP W+ S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KNKR
Sbjct: 310 KGDLSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKNKR 368
Query: 370 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 429
PR + E + A W + + H T +S ++E K + VAW + + +S+ S+
Sbjct: 369 PRETAEGLDIHALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAMSS 424
Query: 430 FMSRTQS-DGEWL-------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP-SK 479
+ + + G W + P + + SQ+LFQ +D + + WP S + P SK
Sbjct: 425 SICQNSAVTGSWFKGFNSSGSHPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPSSK 483
Query: 480 PNNDTLLEQVET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 527
+ +T L +T K E G RLFG+ LINHA SSA ++K V +
Sbjct: 484 LSCNTALCSYQTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGAGE 542
Query: 528 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG 587
T + DS S + K+ V SP+E QS QSC S RSR KVQM G
Sbjct: 543 TSARAAGSFE---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQMHG 593
Query: 588 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDPWH 645
V RA+DL L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG PW
Sbjct: 594 NDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVPWQ 652
Query: 646 EFCNMVKRIFICSSQDVKKM 665
EFC MV++I I S D M
Sbjct: 653 EFCQMVRKIVIHSIGDRGHM 672
>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
Length = 699
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 335/695 (48%), Positives = 447/695 (64%), Gaps = 63/695 (9%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCR 75
+L+ LW+ACAGPLV+VP++ +RV+YF QGH+EQL+ T+ L ++I +F++P KILC+
Sbjct: 14 ELFAVLWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCK 73
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTST
Sbjct: 74 VVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 134 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 194 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 253
Query: 255 TQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T ++F+VYY+PR SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+VG
Sbjct: 254 TNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGE 313
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA--KNKRP 370
D S W S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ + KNKRP
Sbjct: 314 GDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNKRP 372
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSNSN 429
R E L A W + + Q H T + ++E I H V W +H + + S+
Sbjct: 373 REPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAVSS 431
Query: 430 FMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 478
+ + E WL SP + + SQ++FQ + I+ WPA S + P+
Sbjct: 432 SVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEEPT 490
Query: 479 K-----------------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV 521
PN ++E G+K RLFG++L+ +
Sbjct: 491 SKLSSNTAACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS-------- 536
Query: 522 PVSSLTTEGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCLTS 576
+S+ T + + A+A G + + + F + +E + SP+E QS Q+ +
Sbjct: 537 -ISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN--YT 593
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 636
R+R KVQM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEGD
Sbjct: 594 ARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEGDT 650
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
M VGDDPW EFC MV++I + +D KK+ P KL
Sbjct: 651 MEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 685
>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
Length = 737
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 349/713 (48%), Positives = 441/713 (61%), Gaps = 86/713 (12%)
Query: 9 SQPSSN----SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIP 64
S+PS+ +D LY ELW ACAGPLV VP+ G +V+YFPQGH EQ+E STNQ +Q +P
Sbjct: 29 SEPSAGFRDANDGLYTELWHACAGPLVSVPQMGDKVFYFPQGHTEQVEKSTNQGADQPMP 88
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP--RPKVHS 122
+ LPSKILCRVVN+ L AE +TDEVYAQ+TL+PEP+Q+E TT + SP RP V+S
Sbjct: 89 NYDLPSKILCRVVNVWLKAEPDTDEVYAQLTLIPEPNQDE-TTLEKETVQSPPRRPHVYS 147
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSVLR+HA ECLP LDM+Q PTQELVAKDLHG EWRF+HIFRGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVLRRHAEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQ 207
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQ++MP+SVISS SMH
Sbjct: 208 PRRHLLTTGWSAFVSSKRLVAGDAFIFLRGENGELRVGVRRALRQQNNMPTSVISSHSMH 267
Query: 243 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
LGVLATA HA +T TMF V+Y+PRT S+F+I ++Y+E+V N +++GMR++MRFEGE++
Sbjct: 268 LGVLATAMHAFSTGTMFSVFYRPRTSPSEFVIPYDQYMESVKNNYSIGMRFRMRFEGEET 327
Query: 301 PERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
PE+RF+GT+VGVED+ S W SKWR LKVQWDE +S+ RP RVSPW+IEP SA P
Sbjct: 328 PEQRFTGTIVGVEDYDSNRWPASKWRCLKVQWDEQSSVERPLRVSPWKIEP---SAAPTA 384
Query: 360 VQ-PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRI-DNHVAW 417
+ P + + KRPR ++PS + +R +T+ S +
Sbjct: 385 INPPPIPRAKRPR-------TNVPSPSDVSHLSREGLPRGMTEHSQPPRYPGVLQGQEGM 437
Query: 418 HHKHSDFSSNSNFMSRTQSDGEWLT------------SPRVKFSQQLFQEAIDDNKNISA 465
FSS +N Q W P + L E+ KN
Sbjct: 438 ALVGGPFSSGTNNPQSHQKSSMWAPPLLPPKEDPYPHPPHPNWMSLLRSESPFTGKNP-- 495
Query: 466 WPAHSGHSTPHPSK----PNNDTLL----EQVETGRKTETGTSCRLFGIELINHATSSA- 516
P+H P P + P LL +Q G ++G C+LFGI L H T A
Sbjct: 496 -PSHWA-PFPFPGEKAWPPLGPALLVGREDQKPLGGGLQSG-GCKLFGINLFEHQTEVAS 552
Query: 517 ------PSEKVPVSSLTT------EGHIISTISAA----ADSDGKSDIAKEFKEKKQEQV 560
PS L T EG +S S AD+ G +D
Sbjct: 553 HGIAGFPSRGQQQVVLRTPPPVGLEGDQVSEQSKGGGKSADTGGDTD------------- 599
Query: 561 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 620
+ P ++QS TS RS TKV MQG A+GR++DLT GY L+ EL+ MF +G+L
Sbjct: 600 RPLPHKAQS-----TSTRSCTKVHMQGNALGRSVDLTKFKGYKDLVAELDRMFGFEGELM 654
Query: 621 TRTK-WEIVYTDDEGDMMLVGDDPWHEF---CNMVKRIFICSSQDVKKMSPGS 669
K W++VYTDDEGDMMLVGDDPW + C MV++I+I + ++V++M P S
Sbjct: 655 DPMKGWQVVYTDDEGDMMLVGDDPWQRYREXCVMVRKIYIYTREEVQRMRPRS 707
>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
Length = 688
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 334/670 (49%), Positives = 436/670 (65%), Gaps = 42/670 (6%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCR 75
+L+ ELW+ACAGPLV++P+ +RV+YF QGH+EQL+ T+ L +I +F++P+KILC+
Sbjct: 8 ELFAELWRACAGPLVELPQTDERVFYFLQGHLEQLQEPTDPALLADQIKMFQVPNKILCK 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ETDE+YAQITL PEP Q + PT PDP ++ RP VHSF K+LT SDTST
Sbjct: 68 VVNVELKAETETDEMYAQITLQPEPDQMDLPTLPDPPLPETSRPVVHSFCKILTPSDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 128 HGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+L+AGD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 188 FVTSKKLIAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 247
Query: 255 TQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T ++F+VYY+PR SQ+I+SLNKYLE+ F VGMR+KM FEGED P ++FSGTVV
Sbjct: 248 TNSIFLVYYRPRLSQSQYIVSLNKYLESSKIGFNVGMRFKMSFEGEDVPVKKFSGTVVDK 307
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL---VQPVLAKNKR 369
D SPHW+ S W++LKV+WDE + P+RVS WEIEPF ASA P + VQP + KNKR
Sbjct: 308 GDLSPHWQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASA-PAINIPVQPSM-KNKR 365
Query: 370 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 429
PR + E + A W + + H T +S + + VAW + +S+ S+
Sbjct: 366 PRETAESLDIHALEPAQEFWLSGRPEQHK-TSISSNEPNCISVHQVAWTSERPGYSAMSS 424
Query: 430 FMSRTQS-DGEWL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPH-P 477
+ + + G W SP + + SQ+LFQ +D + + WP S +
Sbjct: 425 SICQNSAVIGSWFKDFNSSSKGASPSLPEISQKLFQVTSNDAR-VPPWPGLSAYQAEELS 483
Query: 478 SKPNNDTLLEQVET-----------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 526
SK + +T L +T K E G RLFG+ L+NH SS ++K+ V
Sbjct: 484 SKLSCNTALCSYQTEEVAPKFSIAVEEKKEPGM-FRLFGVNLVNHTRSSGIADKMTVGVG 542
Query: 527 TTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQ 586
T + + S + K+ E SP+E QS QSC S R+R KVQM
Sbjct: 543 ETSMRGAGSFEDSGQLSALSRVTKDHTHLVNE----SPREIQSHQSC--SGRNRIKVQMH 596
Query: 587 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHE 646
G AVG+A+DL L GY L+ ELEEMF+IK L ++ +W++ +T+DE D M VG W E
Sbjct: 597 GHAVGKAVDLGNLDGYVQLMGELEEMFEIK-DLGSKEEWKVTFTNDENDTMEVGAVLWQE 655
Query: 647 FCNMVKRIFI 656
FC MV++I I
Sbjct: 656 FCQMVRKIVI 665
>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
Length = 405
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/359 (77%), Positives = 309/359 (86%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D+L +ELW+ CAGPLVDVPK +RVYYFPQGHMEQLEASTNQELNQ IPLF L KI
Sbjct: 23 SGEDELCQELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLFNLQPKI 82
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LCRV++I L+AEQ++DEVYAQI LLPE Q EPT+PD + PRPKVH F KVLTASDT
Sbjct: 83 LCRVLHIQLLAEQDSDEVYAQIALLPEADQVEPTSPDLSLPEPPRPKVHFFCKVLTASDT 142
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFS+LRKHA ECLPPLDM Q+TP QELVAKDLHG+EW FKHIFRGQPRRHLLTTGW
Sbjct: 143 STHGGFSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLTTGW 202
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
STFV+SKRLV GD+FVFLR GE+ +G+R LARQ SSMP SVISSQSMHLGVLATASHA
Sbjct: 203 STFVSSKRLVTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGVLATASHA 262
Query: 253 VATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
V TQTMFVVYYKPRTSQFII LNKYLEAV ++++VGMR+KM+FEGE+ PE+RF+GT+VGV
Sbjct: 263 VTTQTMFVVYYKPRTSQFIIGLNKYLEAVKHRYSVGMRFKMKFEGEEIPEKRFTGTIVGV 322
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
ED S WKDSKWRSLKVQWDEPAS+ RPDRVSPW+IEPFVAS LV P+ KNKR R
Sbjct: 323 EDSSSQWKDSKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPPMGVKNKRHR 381
>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 328/706 (46%), Positives = 448/706 (63%), Gaps = 63/706 (8%)
Query: 7 SLSQPSSNSD-DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIP 64
+++QP D +L+ ELW+ACAGPLV+VP++G+RV+YF QGH+EQL+ T+ L ++I
Sbjct: 58 AMAQPGRGRDPELFAELWRACAGPLVEVPQRGERVFYFLQGHLEQLQEPTDSALLAEQIK 117
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSF 123
+F++P KILC+VVN+ L AE ETDEVYAQITL P+ Q++ P DP ++PRP VH+F
Sbjct: 118 MFQVPYKILCKVVNVELKAETETDEVYAQITLQPDADQSDLPLILDPTLPETPRPVVHTF 177
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K+LT SDTSTHGGFSVLR+HA ECLPPLDM TPTQE+++KDLHG EWRFKHI+RGQP
Sbjct: 178 CKILTPSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQP 237
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWSTFVTSK+L+AGD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHL
Sbjct: 238 RRHLLTTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHL 297
Query: 244 GVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 301
GVLA+ASHA+ T ++FVVYY+PR SQ+I+S+NKY A F VGMR++M FE ED P
Sbjct: 298 GVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDVP 357
Query: 302 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR-PDRVSPWEIEPFVAS--ATPN 358
++F GT+VG DFSP W S+W+SLKVQWD+ +I P+RVSPWEI+ S A
Sbjct: 358 VKKFFGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAIST 417
Query: 359 LVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRID---- 412
L+Q AKNKRPR + E ++LPS W + + Q H T + +++ RI
Sbjct: 418 LLQSS-AKNKRPRETNE--NMNLPSQEPTQEFWLSGVTQQHERTYVG-SSDPNRISGSGY 473
Query: 413 NHVAWHHKHSDFSS-NSNFMSRTQ---SDGEWL---------TSPRV-KFSQQLFQEAID 458
+ + W +H+ + + +S+ + +T DG W SP + + +Q+L + A
Sbjct: 474 HQILWPSEHAGYGAMSSSSVCQTPLGLGDG-WFKDFNTSSQGVSPTLSEITQKLNRVASS 532
Query: 459 DNKNISAWPAH--SGHSTPHPSK--------PNNDTLLEQV-----ETGRKTETGTSCRL 503
+ + W G+ P+ P L EQV + K + RL
Sbjct: 533 EGRAPPPWATALCGGYRAEEPTSKLSCNATLPLPSPLTEQVAPYLLKVAEKVKGPGMVRL 592
Query: 504 FGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQ 561
FG+ L+ + ++A + V + T I ++ + S + K E
Sbjct: 593 FGVNLMENTNNAAAATAGNASVGAGETSARITGSVEGSGQLSAFSKVTKVVNE------- 645
Query: 562 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 621
SP+E QS+QS + R+R KVQM G AVGRA+DL +L GY+ L +ELE+MF+IK
Sbjct: 646 -SPREIQSQQSSI--GRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIK---DI 699
Query: 622 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ +++ + D+EGD M VGDDPW EFC MV++I I +D K M P
Sbjct: 700 KQNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDP 745
>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/645 (49%), Positives = 408/645 (63%), Gaps = 81/645 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EA T +ELN+ P+F LPSK+ CRV+
Sbjct: 25 MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELIEAYTREELNKIQPIFDLPSKLQCRVI 84
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L E+ +DE YA+ITL+P+ PT D + RP V+SF+KVLTASDTS HGG
Sbjct: 85 AIQLKVEKNSDETYAEITLMPDTQVVIPTQND----NHYRPLVNSFTKVLTASDTSVHGG 140
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLLT+GW+ F T
Sbjct: 141 FSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTSGWNAFTT 200
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SK+LVAGD VFLRGE GEL VG+R QQ ++ SS+IS SM GV+A+A HA Q
Sbjct: 201 SKKLVAGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDSMRHGVIASAVHAFNNQC 260
Query: 258 MFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
MF+V YKPR+SQFI+S NK+++AVNNKF VG R+ MRFEGED ERR+SGT++GV +FS
Sbjct: 261 MFIVVYKPRSSQFIVSYNKFVDAVNNKFNVGSRFTMRFEGEDFSERRYSGTIIGVNNFSS 320
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 377
HW +S+WRSL+V+WDE AS RPD+VSPW+IE S N+++P L KNKR R E+
Sbjct: 321 HWMESEWRSLEVKWDEFASFPRPDKVSPWDIEHLTPSL--NVLRPSLLKNKRSREVNEI- 377
Query: 378 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 437
S +S L Q + + S+T S + F+S
Sbjct: 378 ----GSTSSHLLHPILTQGQEIGEPSMT-------------------SPMNVFLS----- 409
Query: 438 GEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKP----NNDTLLEQVETGR 493
+ + I+D++ P+ S P+ P NND ++ +E
Sbjct: 410 ---------------YCDEIEDDET----PSRMLMSYHVPTMPKLNYNNDQMVTPIEENI 450
Query: 494 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK 553
T S RLFG+ L ATSS K P+ + +S KS+I+K +
Sbjct: 451 TTNANASFRLFGVSL---ATSSVI--KDPIEPM--------------ESYPKSEISKLCQ 491
Query: 554 EKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
EKK Q SP+E QSKQ +S RS TKVQMQGV VGRALDL L GYDHLI ELE+
Sbjct: 492 EKKLGLGQTITSPREIQSKQ--FSSTRSCTKVQMQGVPVGRALDLNVLNGYDHLIIELEK 549
Query: 612 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+FD+ GQL TR +W+I + D+EG+ LVGD+PW EFC+MVK+IFI
Sbjct: 550 LFDLNGQLQTRNQWKIAFKDNEGNEKLVGDNPWPEFCSMVKKIFI 594
>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
Length = 606
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 309/649 (47%), Positives = 411/649 (63%), Gaps = 79/649 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 84 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYG 139
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV +KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+
Sbjct: 140 GFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFI 199
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 200 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 259
Query: 257 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
+F+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV DFS
Sbjct: 260 CIFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFS 319
Query: 317 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 376
PHWK S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L KNKR R E
Sbjct: 320 PHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKNKRLREVNE- 376
Query: 377 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 436
S++S L Q + QLSV +S N R +
Sbjct: 377 ----FGSSSSHLLPPILTQGQEIGQLSV--------------------ASPMNISLRYRD 412
Query: 437 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 496
E A++ ++ + ++P P P N+ ++ Q+E T+
Sbjct: 413 TTE---------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENITTK 452
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
GT+ RLFG+ L + P K P+ + SDI+K + KK
Sbjct: 453 AGTNFRLFGVTL-----DTPPMIKDPIKQI------------------GSDISKLTERKK 489
Query: 557 --QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 614
Q Q SP E QSKQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD
Sbjct: 490 FGQSQTLRSPIEIQSKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 547
Query: 615 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
IKGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 548 IKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 305/653 (46%), Positives = 413/653 (63%), Gaps = 78/653 (11%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYG 139
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GF V +KHA ECLPPLDM+Q P QEL+AKDLHG +WRF+H +RG P+RH LTTGW+ F
Sbjct: 140 GFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFT 199
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA+ Q
Sbjct: 200 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQ 259
Query: 257 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
+F+V YKPR+SQFI+S +K+L+A+NNKF VG R+ MRFEG+D ERR+ GT++GV DFS
Sbjct: 260 CIFIVVYKPRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVNDFS 319
Query: 317 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME- 375
PHWK S+WRSL+VQWDE AS +RP++VSPWEIE +++ N+ + L KNKR R ++E
Sbjct: 320 PHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSAL--NVPRSSLLKNKRLRETLEY 377
Query: 376 ---VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 432
+ L S++S L Q + QLSV + N++
Sbjct: 378 LLNILVLYTCSSSSHILPPILTQGQEIGQLSVAS------------------PMNTSLRY 419
Query: 433 RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 492
R + ++A++ ++ + ++P P P N+ ++ Q+E
Sbjct: 420 RDTT-----------------EDAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEEN 457
Query: 493 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK-- 550
T+ T+ RLFG+ L P E++ SDI+K
Sbjct: 458 ITTKAVTNFRLFGVSLAIPLVIKDPIEEI-----------------------GSDISKLT 494
Query: 551 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 610
E K+ Q Q SP E QSKQ S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE
Sbjct: 495 EGKKFGQSQTLRSPIEIQSKQ--FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELE 552
Query: 611 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
++FD+KGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 553 KLFDLKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 605
>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
Length = 620
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 309/651 (47%), Positives = 411/651 (63%), Gaps = 81/651 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+
Sbjct: 36 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVI 95
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 96 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYG 151
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV +KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+
Sbjct: 152 GFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFI 211
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 212 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 271
Query: 257 TMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
+F+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV D
Sbjct: 272 CIFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSD 331
Query: 315 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 374
FSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L KNKR R
Sbjct: 332 FSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKNKRLREVN 389
Query: 375 EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 434
E S++S L Q + QLSV +S N R
Sbjct: 390 E-----FGSSSSHLLPPILTQGQEIGQLSV--------------------ASPMNISLRY 424
Query: 435 QSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK 494
+ E A++ ++ + ++P P P N+ ++ Q+E
Sbjct: 425 RDTTE---------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENIT 464
Query: 495 TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
T+ GT+ RLFG+ L + P K P+ + SDI+K +
Sbjct: 465 TKAGTNFRLFGVTL-----DTPPMIKDPIKQIG------------------SDISKLTER 501
Query: 555 KK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 612
KK Q Q SP E QSKQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++
Sbjct: 502 KKFGQSQTLRSPIEIQSKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKL 559
Query: 613 FDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
FDIKGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 560 FDIKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 610
>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
Length = 593
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 303/647 (46%), Positives = 406/647 (62%), Gaps = 89/647 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
S +G FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RHLLTTG
Sbjct: 135 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 194
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A H
Sbjct: 195 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 254
Query: 252 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
A Q MF+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++G
Sbjct: 255 AFDNQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIG 314
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
V +FSPHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ + KNKR R
Sbjct: 315 VSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLKNKRLR 372
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
E S++S L Q + QLSV + N + +
Sbjct: 373 EVNE-----FGSSSSHLLPPILTQGQEIGQLSVAS------------------PMNISLL 409
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
R ++ +A++ ++ + ++P P P + N+ ++ Q+E
Sbjct: 410 YRETTE-----------------DAMNPSRLLMSYPVQ-----PMPKRNYNNQMVTQIEE 447
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK- 550
T+ GT+ RLFG+ L ++ P K P+ + SDI+K
Sbjct: 448 NITTKAGTNFRLFGVSL-----ATPPVIKDPIEQI------------------GSDISKL 484
Query: 551 -EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
E K+ Q Q SP + QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD LI EL
Sbjct: 485 TEGKKFGQSQTLRSPTKIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILEL 542
Query: 610 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
E++FD+KGQL TR +W+I++T + D MLVGDDPW EFCNMVKRI+I
Sbjct: 543 EKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589
>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
Length = 598
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 303/652 (46%), Positives = 406/652 (62%), Gaps = 94/652 (14%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKVHSFSKV 126
IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KV
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNE---------NQFRPLVNSFTKV 134
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASD S +G FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RH
Sbjct: 135 LTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRH 194
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGW+ F TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+
Sbjct: 195 LLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVI 254
Query: 247 ATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A+A HA Q MF+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+
Sbjct: 255 ASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYF 314
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
GT++GV +FSPHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ + K
Sbjct: 315 GTIIGVSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLK 372
Query: 367 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 426
NKR R E S++S L Q + QLSV +
Sbjct: 373 NKRLREVNE-----FGSSSSHLLPPILTQGQEIGQLSVAS------------------PM 409
Query: 427 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLL 486
N + + R ++ +A++ ++ + ++P P P + N+ ++
Sbjct: 410 NISLLYRETTE-----------------DAMNPSRLLMSYPVQ-----PMPKRNYNNQMV 447
Query: 487 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 546
Q+E T+ GT+ RLFG+ L ++ P K P+ + S
Sbjct: 448 TQIEENITTKAGTNFRLFGVSL-----ATPPVIKDPIEQI------------------GS 484
Query: 547 DIAK--EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 604
DI+K E K+ Q Q SP + QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD
Sbjct: 485 DISKLTEGKKFGQSQTLRSPTKIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQ 542
Query: 605 LIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
LI ELE++FD+KGQL TR +W+I++T + D MLVGDDPW EFCNMVKRI+I
Sbjct: 543 LILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 594
>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
Length = 598
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/645 (47%), Positives = 409/645 (63%), Gaps = 87/645 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+++YYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
I L E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TS GGF V +KHA ECLPPLDM+Q PTQEL+A DLHG +WRF H +RG P+RHLLTTG
Sbjct: 135 TS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTG 192
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS+IS +SM GV+A+A H
Sbjct: 193 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKH 252
Query: 252 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
A Q MF+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++G
Sbjct: 253 AFDNQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIG 312
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
V DFSPHWK S+WR+L+VQWDE AS +RP++VSPWEIE + + N+ +P L KNKR R
Sbjct: 313 VSDFSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPAL--NVPRPSLLKNKRLR 370
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
E+ S++S L Q + QLSV + N +
Sbjct: 371 EVNEI-----GSSSSHLLPPILTQGQEIGQLSVAS------------------PMNISLT 407
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
R + ++ ++ ++ + ++P P P N+ ++ Q+E
Sbjct: 408 YRDTT-----------------EDVMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEE 445
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 551
T+TGT+ RLFG+ L+ + P E++ G IS ++ E
Sbjct: 446 NITTKTGTNFRLFGVSLVTPSVIKDPIEEI--------GSEISKLT-------------E 484
Query: 552 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
K+ Q Q SP E QSKQ +S R+ TKVQMQGV + RA+DL+ L GYD LI ELEE
Sbjct: 485 GKKFGQSQTLRSPTEIQSKQ--FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEE 542
Query: 612 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+FD+KGQL TR +WEI +TD + D MLVGDDPW EFCNMVK+I I
Sbjct: 543 LFDLKGQLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 587
>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 300/658 (45%), Positives = 411/658 (62%), Gaps = 80/658 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ +YYFPQGH+E +EAST EL+Q P F LPSK+ C V
Sbjct: 24 MYEQLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHFDLPSKLRCCVD 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+I L +Q TD+VYA+I L+P+ + + TP D+ RP V+SFSK+LT+SD +THGG
Sbjct: 84 DIQLKIDQNTDDVYAEIYLMPDTT--DVITP-ITTMDNQRPMVYSFSKILTSSDANTHGG 140
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
S+L++HATECLPPLDM+Q TP Q LVAKDLHG EW FKH FRG PRRHL T+GWS F T
Sbjct: 141 LSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFAT 200
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL+ GD FVFLRGENGEL VG+R Q PS VIS+Q M GV+A+ +A ++
Sbjct: 201 TKRLIVGDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVIASVVNAFKSKC 260
Query: 258 MFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
F+V YKP +SQF+++ +K+++A+NNKF VG R++MRFEG+D E+R+SGT++GV D SP
Sbjct: 261 KFIVVYKPSSSQFVVNYDKFVDAMNNKFIVGSRFRMRFEGQDFSEKRYSGTIIGVNDMSP 320
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 377
HWKDS+WRSL+VQWDE + RPD+VSPWEIE + S++ + QP + + KR R E+
Sbjct: 321 HWKDSEWRSLQVQWDELSPFPRPDKVSPWEIEHLIPSSS--ISQPTVLQKKRARQCNEIG 378
Query: 378 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 437
S++SN ++ +
Sbjct: 379 -----------------------------------------------STSSNLLTGQEIG 391
Query: 438 GEWLTSPRV--KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDT--LLEQVETGR 493
L+SP+ +FS ++A++D+K S W P KPNN+ L++Q +
Sbjct: 392 QSSLSSPKSVPEFS---CRDAVEDSKFPSDWLM--SDLVPAIPKPNNNNNQLVQQTKEKI 446
Query: 494 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK 553
TE TSC LFG++L + + P + + TT S I + K
Sbjct: 447 TTEATTSCILFGVDLTKASKTKDPMGPIEATETTT-----------------SCILSQDK 489
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
+ Q SPKE QS S S R R KVQMQGV +GRA+DLT GY+ LI +LEE+F
Sbjct: 490 KLDQTLTWTSPKEVQS--SKFNSTRRRIKVQMQGVVIGRAVDLTVFHGYNQLIQKLEELF 547
Query: 614 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
D+K +L +R +WEIV+ ++EG++M +GDDPW EFCNM K+IFI S ++++KM +K+
Sbjct: 548 DLKDELRSRNQWEIVFINNEGNVMPLGDDPWPEFCNMAKKIFIGSKEEIEKMKSRNKV 605
>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
Length = 605
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 300/652 (46%), Positives = 407/652 (62%), Gaps = 82/652 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EAST +ELN+ P+ PSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L E +DE YA+ITL+P+ +Q T + + RP V+SF+KVLTASDTS HGG
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQN---QNQFRPLVNSFTKVLTASDTSVHGG 140
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV +KHA ECLPPLDM+Q PTQE++A DLHG +WRF+HI+RG +RHLLT GW+ F T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTT 200
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SK+LV GD VF+RGE GEL VG+R QQ ++PSS++S +SM G++A+A HA Q
Sbjct: 201 SKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQC 260
Query: 258 MFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
MF+V YKPR+SQFI+S +K+L+ VNNKF VG R+ MRFEG+D ERR GT++GV DFSP
Sbjct: 261 MFIVVYKPRSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSP 320
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKRPRLSME 375
HWK S+WRSL+VQWDE AS RP++VSPW+IE TP N+ + KNKR R E
Sbjct: 321 HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHL----TPWSNVSRSSFLKNKRSREVNE 376
Query: 376 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 435
+ S++S L Q + Q S+ ++ N R +
Sbjct: 377 I-----GSSSSHLLPPTLTQGQEIGQQSM--------------------ATPMNISLRYR 411
Query: 436 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 495
+ ++A+ ++ + ++P +K N + ++ +E T
Sbjct: 412 D---------------ITEDAMTPSRLLMSYPVQPM------AKLNYNNVVTPIEENITT 450
Query: 496 ETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEK 555
S RLFG+ L + P E++ + +I++ +EK
Sbjct: 451 NAVASFRLFGVSLATPSVIKDPVEQIGL-----------------------EISRLTQEK 487
Query: 556 K--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
K Q Q+ SP E QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++F
Sbjct: 488 KFGQSQILRSPTEIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLF 545
Query: 614 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D+KGQL R +WEI +T++E D MLVG+DPW EFCNMVK+IFI S ++VK +
Sbjct: 546 DLKGQLQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
Length = 593
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/645 (47%), Positives = 401/645 (62%), Gaps = 85/645 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +E ST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TS HGGF V +KHA ECLP LDM+Q P QEL+A DLHG +WRF H +RG P+RHLLTTG
Sbjct: 135 TSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTG 194
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A H
Sbjct: 195 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKH 254
Query: 252 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
A Q MF V YKPR+S+FI+S +K+L+AVNNKF VG R+ MR EG+D ERR GT++G
Sbjct: 255 AFDNQCMFTVVYKPRSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIG 314
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
V DFSPHWK S+WRSL+VQWDE S P +VSPW+IE + + N+ + L KNKR R
Sbjct: 315 VSDFSPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAI--NVPRSFLLKNKRLR 372
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
E+ S++S L Q QLSV +S N
Sbjct: 373 EVNEI-----GSSSSHLLPPILTQGQENEQLSV--------------------ASPMNIS 407
Query: 432 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 491
R + E +A++ +K + ++P P P N+ ++ ++E
Sbjct: 408 LRYRDATE---------------DAMNPSKLLMSYPVQ-----PMPKLNYNNQMVTEMEE 447
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 551
T+TGT+ RLFG+ L + P K P+ + +E IS ++ E
Sbjct: 448 NITTKTGTNFRLFGVTL-----DTPPVIKDPIEEIGSE---ISKLT-------------E 486
Query: 552 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
K+ Q SP E Q+KQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE+
Sbjct: 487 GKKFGLSQTLRSPTEIQNKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEK 544
Query: 612 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+FDIKGQL TR +WEI +TD + D MLVGDDPW EFCNMVK+IFI
Sbjct: 545 LFDIKGQLQTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
Length = 701
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 321/688 (46%), Positives = 439/688 (63%), Gaps = 53/688 (7%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE-LNQRIPLFRLPSKILCR 75
+L+ ELW+ACAGPLV++P+ GQRV+YF QGH+EQ++ ++Q+ L +I +F++P KILCR
Sbjct: 10 ELFSELWRACAGPLVELPQPGQRVFYFLQGHLEQVQQPSDQKVLADQIKMFQVPYKILCR 69
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ET+EVYAQITLLPE Q P++PDP + RP VHSFSK+LT SDTST
Sbjct: 70 VVNVELKAEVETEEVYAQITLLPEQDQEYLPSSPDPPLPEVRRPVVHSFSKILTPSDTST 129
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ TPTQEL+ KD+ G EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 130 HGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHLLTTGWST 189
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+LV GD FV+LR E GE VGVR +++++MPSSV+SSQSMHLGVLA+ASHA+
Sbjct: 190 FVTSKKLVYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHLGVLASASHALQ 249
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T+++F+VYY+PR SQ+I+++NKY ++ VG+R+KM FEGE+ P ++FSGT+VG
Sbjct: 250 TKSIFLVYYRPRVSQSQYIVNVNKYFLTSKLRYTVGVRFKMSFEGEEVPVKKFSGTIVGD 309
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL---AKNKR 369
SP W S+W+S KVQWD+PA+ P+RVSPWEIEP +A+ + + L +NKR
Sbjct: 310 GALSPQWSCSEWKSKKVQWDDPANCNGPERVSPWEIEPADGAASASTINVPLQSSIRNKR 369
Query: 370 PRLSMEVPPLDLPSAASAPWSARLA---QSHNLTQLSVTAEDKRI-DNHVAW-HHKHSDF 424
PR + E LDL S L+ + H+ + ++ I N V W + + +
Sbjct: 370 PRETTE--DLDLQSLNPTTQEFSLSGMPRQHDKIGDGPSNPNRMIPGNQVIWPGERAAGY 427
Query: 425 SS--NSNFMSRTQSDGEWL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGH 472
S+ +S+F + WL SP + + SQ+L+Q +D + + WP +
Sbjct: 428 SAVGSSSFCQKPLVRESWLEEFNLSRQAMSPTLSEISQKLYQVTRNDAR-AAPWPVLPAY 486
Query: 473 STPHPS--KPNNDTL-----------LEQVETGRKTETGTSCRLFGIELINHATSSAPSE 519
P+ P N L L +V T + E G RLFG+ L+ + +A ++
Sbjct: 487 QAQQPALRLPCNTALHSYRTEEAAPSLPKV-TEKSKEPGM-VRLFGVNLMKPTSGTATAD 544
Query: 520 KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRS 579
+ T + + S + K+ K V SP+E QS QSC+ R+
Sbjct: 545 NAGAGAGETSARVAGPCEESGQVSALSRVTKDHK-----VVNESPREIQSNQSCIA--RN 597
Query: 580 RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLV 639
R KVQM G AVGRA+DL L GY+ LI ELE+MFDIK + +++ + D++GD M V
Sbjct: 598 RVKVQMHGNAVGRAVDLANLDGYEQLIRELEQMFDIK---DIKQNFKVAFADNDGDTMKV 654
Query: 640 GDDPWHEFCNMVKRIFICSSQDVKKMSP 667
GDDPW EFC MVK+I I ++ +KM P
Sbjct: 655 GDDPWMEFCRMVKKIVIYPLEE-EKMEP 681
>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
Length = 600
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/647 (47%), Positives = 409/647 (63%), Gaps = 89/647 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+++YYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
I L E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TS GGF V +KHA ECLPPLDM+Q PTQEL+A DLHG +WRF H +RG P+RHLLTTG
Sbjct: 135 TS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTG 192
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS+IS +SM GV+A+A H
Sbjct: 193 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKH 252
Query: 252 AVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
A Q MF+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT+
Sbjct: 253 AFDNQCMFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTI 312
Query: 310 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
+GV DFSPHWK S+WR+L+VQWDE AS +RP++VSPWEIE + + N+ +P L KNKR
Sbjct: 313 IGVSDFSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPAL--NVPRPSLLKNKR 370
Query: 370 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 429
R E+ S++S L Q + QLSV + N +
Sbjct: 371 LREVNEI-----GSSSSHLLPPILTQGQEIGQLSVAS------------------PMNIS 407
Query: 430 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 489
R + ++ ++ ++ + ++P P P N+ ++ Q+
Sbjct: 408 LTYRDTT-----------------EDVMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQI 445
Query: 490 ETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIA 549
E T+TGT+ RLFG+ L+ + P E++ G IS ++
Sbjct: 446 EENITTKTGTNFRLFGVSLVTPSVIKDPIEEI--------GSEISKLT------------ 485
Query: 550 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
E K+ Q Q SP E QSKQ +S R+ TKVQMQGV + RA+DL+ L GYD LI EL
Sbjct: 486 -EGKKFGQSQTLRSPTEIQSKQ--FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILEL 542
Query: 610 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
EE+FD+KGQL TR +WEI +TD + D MLVGDDPW EFCNMVK+I I
Sbjct: 543 EELFDLKGQLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 589
>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 601
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/378 (70%), Positives = 309/378 (81%), Gaps = 3/378 (0%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL- 59
MAN SN D+LY ELWKACAGPLV+VP+ G+RV+YFPQGHMEQL ASTNQ +
Sbjct: 1 MANVEADFRTSGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVV 60
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK 119
+Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P
Sbjct: 61 DQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPT 120
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIF
Sbjct: 121 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 180
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQ
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 240
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
SM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N F++GMRY+MRFEGE+
Sbjct: 241 SMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEE 300
Query: 300 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPN 358
SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++VSPWEIEPF SA TP
Sbjct: 301 SPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 360
Query: 359 LVQPVLAKNKRPRLSMEV 376
Q +K+KR R E+
Sbjct: 361 PTQQ-QSKSKRSRPISEI 377
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 433 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 473
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 474 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 529
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 583
>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
Length = 601
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/378 (70%), Positives = 309/378 (81%), Gaps = 3/378 (0%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL- 59
MAN SN D+LY ELWKACAGPLV+VP+ G+RV+YFPQGHMEQL ASTNQ +
Sbjct: 1 MANVEADFRTSGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVV 60
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK 119
+Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P
Sbjct: 61 DQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPA 120
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIF
Sbjct: 121 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 180
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQ
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 240
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
SM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N F++GMRY+MRFEGE+
Sbjct: 241 SMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEE 300
Query: 300 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPN 358
SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++VSPWEIEPF SA TP
Sbjct: 301 SPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 360
Query: 359 LVQPVLAKNKRPRLSMEV 376
Q +K+KR R E+
Sbjct: 361 PTQQ-QSKSKRSRPISEI 377
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 106/174 (60%), Gaps = 24/174 (13%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K
Sbjct: 433 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------HD 473
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 474 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 529
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 583
>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
Length = 601
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 317/657 (48%), Positives = 411/657 (62%), Gaps = 89/657 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EAST ++LN+ P+ LPSK+ CRV+
Sbjct: 25 MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLNELQPIVDLPSKLQCRVI 84
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
I L E+ +DE YA+ITL+P P+QNE + RP V+SF+KVLTASD
Sbjct: 85 TIQLKVERNSDETYAEITLMPYTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 135
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TS HGGFSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLLTTG
Sbjct: 136 TSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTG 195
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F+TSK+LVAGD VFLRGE GEL VG+R QQ ++PSS+IS +SM GV+A+A H
Sbjct: 196 WNAFITSKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIESMRHGVIASAKH 255
Query: 252 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
A Q MF+V YKPR+SQFI++ +K+L+A+NNKF VG R+ RFE +D ERR+ GT++G
Sbjct: 256 AFDNQCMFIVVYKPRSSQFIVNYDKFLDAMNNKFNVGSRFTKRFEEDDFSERRYFGTIIG 315
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
V DFSPHWK S+WRSLK DE AS RPD+VSPWEIE ++ + N+++ + KNK R
Sbjct: 316 VIDFSPHWKCSEWRSLK---DEFASFPRPDKVSPWEIE--YSTPSSNVLRLSMLKNKCSR 370
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
E+ S++S L Q + Q S
Sbjct: 371 EFNEI-----GSSSSHLLPPILTQGQEIGQPS---------------------------- 397
Query: 432 SRTQSDGEWLTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 490
+TSP V S +++AI+DN S T NND ++ +
Sbjct: 398 ---------MTSPMNVPLS---YRDAIEDNSTPSRLLMSYSVQTMSRLNYNNDQMVTPII 445
Query: 491 TGRKTET-GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIA 549
G T G SCR+FG+ L ++ P K P+ + DS S+I+
Sbjct: 446 EGNITNNGGASCRVFGVSL-----ATPPVIKDPIEQM--------------DSYPNSEIS 486
Query: 550 KEFKEKKQEQVQV-SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 608
K +EKK Q+ SP+E QSKQ L+S R+ TKVQM GVA+GRALDL+ L GYD LI E
Sbjct: 487 KLSQEKKFGLGQMRSPREIQSKQ--LSSTRTCTKVQMHGVALGRALDLSVLNGYDQLILE 544
Query: 609 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
LE++FD+KGQL R +WEI + D+E D MLVGDDPW EFCNMVK+I I S+++VK
Sbjct: 545 LEKLFDLKGQLQNRNQWEIAFKDNEEDEMLVGDDPWPEFCNMVKKIIIYSNEEVKNF 601
>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 622
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/366 (72%), Positives = 306/366 (83%), Gaps = 3/366 (0%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSK 71
SN D+LY ELWKACAGPLV+VP+ G+RV+YFPQGHMEQL ASTNQ + +Q IP+F LP K
Sbjct: 34 SNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPK 93
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
ILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P V SF K+LTASD
Sbjct: 94 ILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASD 153
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTG
Sbjct: 154 TSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTG 213
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQSM LGVLATASH
Sbjct: 214 WSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASH 273
Query: 252 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
AV T T+FVV+YKPR SQFIIS+NKY+ A+ N F++GMRY+MRFEGE+SPER F+GT++G
Sbjct: 274 AVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIG 333
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRP 370
D S W SKWRSL++QWDEP+SI RP++VSPWEIEPF SA TP Q +K+KR
Sbjct: 334 SGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQ-QSKSKRS 392
Query: 371 RLSMEV 376
R E+
Sbjct: 393 RPISEI 398
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 454 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 494
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 495 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 550
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 551 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 604
>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
thaliana [Arabidopsis thaliana]
Length = 619
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/671 (45%), Positives = 401/671 (59%), Gaps = 111/671 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ--------------------------L 51
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +
Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLSLLSLSV 83
Query: 52 EASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PSQNEP 105
E ST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ P+QNE
Sbjct: 84 ETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNE- 142
Query: 106 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 165
+ RP V+SF+KVLTASDTS HGGF V +KHA ECLP LDM+Q P QEL+A
Sbjct: 143 --------NQFRPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLA 194
Query: 166 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 225
DLHG +WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE GEL VG+R
Sbjct: 195 IDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAR 254
Query: 226 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 285
QQ ++PSS++S M GV+A+A HA Q MF V YKPR+S+FI+S +K+L+AVNNKF
Sbjct: 255 HQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRSSKFIVSYDKFLDAVNNKF 314
Query: 286 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 345
VG R+ MR EG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE S P +VSP
Sbjct: 315 NVGSRFTMRLEGDDFSERRCFGTIIGVSDFSPHWKCSEWRSLEVQWDEFTSFPGPKKVSP 374
Query: 346 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 405
W+IE + + N+ + L KNKR R E+ S++S L Q QLSV
Sbjct: 375 WDIEHLMPAI--NVPRSFLLKNKRLREVNEI-----GSSSSHLLPPILTQGQENEQLSV- 426
Query: 406 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 465
+S N R + E +A++ +K + +
Sbjct: 427 -------------------ASPMNISLRYRDATE---------------DAMNPSKLLMS 452
Query: 466 WPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSS 525
+P P P N+ ++ ++E T+TGT+ RLFG+ L + P K P+
Sbjct: 453 YPVQ-----PMPKLNYNNQMVTEMEENITTKTGTNFRLFGVTL-----DTPPVIKDPIEE 502
Query: 526 LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 585
+ +E IS ++ E K+ Q SP E Q+KQ +S+R+ TKVQM
Sbjct: 503 IGSE---ISKLT-------------EGKKFGLSQTLRSPTEIQNKQ--FSSSRTCTKVQM 544
Query: 586 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWH 645
QGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +WEI +TD + D MLVGDDPW
Sbjct: 545 QGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGDDPWP 604
Query: 646 EFCNMVKRIFI 656
EFCNMVK+IFI
Sbjct: 605 EFCNMVKKIFI 615
>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
Length = 662
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 313/646 (48%), Positives = 413/646 (63%), Gaps = 50/646 (7%)
Query: 59 LNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPR 117
L ++I +F++P KILC+VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PR
Sbjct: 20 LAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPR 79
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
P VHSF K+LT SDTSTHGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKH
Sbjct: 80 PVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKH 139
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
I+RGQPRRHLLTTGWSTFVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVIS
Sbjct: 140 IYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVIS 199
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 295
SQSMHLGVLA+ASHA+ T ++F+VYY+PR SQ+I+S+NKYL A F VGMR+KM F
Sbjct: 200 SQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSF 259
Query: 296 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
EGED P ++FSGT+VG D S W S+W+SLKVQWDE ++ P+RVSPWEIE +A
Sbjct: 260 EGEDVPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA 319
Query: 356 TPNLVQPVLA--KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDN 413
P + P+ + KNKRPR E L A W + + Q H T + ++E I
Sbjct: 320 -PAINVPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISG 377
Query: 414 H-VAWHHKHSDFSSNSNFMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDDNK 461
H V W +H + + S+ + + E WL SP + + SQ++FQ +
Sbjct: 378 HQVVWPGEHPGYGAVSSSVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEA 436
Query: 462 NISAWPAHSGHSTPHP-SKPNNDTLL------EQVETGRKTETGTS----CRLFGIELIN 510
I+ WPA S + P SK +++T E K G RLFG++L+
Sbjct: 437 RIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMK 496
Query: 511 HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPK 565
+ +S+ T + + A+A G + + + F + +E + SP+
Sbjct: 497 CTS---------ISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQ 547
Query: 566 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKW 625
E QS Q+ + R+R KVQM G AVGRA+DL L GY+ L++ELEEMF+IK + KW
Sbjct: 548 EIQSHQN--YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKW 602
Query: 626 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
++ +TDDEGD M VGDDPW EFC MV++I + +D KK+ P KL
Sbjct: 603 KVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 648
>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
Length = 590
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 297/651 (45%), Positives = 400/651 (61%), Gaps = 99/651 (15%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYG 139
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GF V +KHA ECLPPL + P QEL+AKDLHG +WRF+H +RG P+RH LTTGW+ F
Sbjct: 140 GFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFT 195
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA+ Q
Sbjct: 196 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQ 255
Query: 257 TMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
+F+V YKP R+SQFI+S +K+L+A+NNKF VG R+ MRFEG+D ERR+ GT++GV D
Sbjct: 256 CIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVND 315
Query: 315 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 374
FSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE +++ N+ + L KNKR R
Sbjct: 316 FSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSAL--NVPRSSLLKNKRLREVN 373
Query: 375 EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 434
E + QLSV + N++ R
Sbjct: 374 EF-------------------GQEIGQLSVAS------------------PMNTSLRYRD 396
Query: 435 QSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK 494
+ ++A++ ++ + ++P P P N+ ++ Q+E
Sbjct: 397 TT-----------------EDAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENIT 434
Query: 495 TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EF 552
T+ T+ RLFG+ L P E++ SDI+K E
Sbjct: 435 TKAVTNFRLFGVSLAIPLVIKDPIEEI-----------------------GSDISKLTEG 471
Query: 553 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 612
K+ Q Q SP E QSKQ S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++
Sbjct: 472 KKFGQSQTLRSPIEIQSKQ--FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKL 529
Query: 613 FDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
FD+KGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 530 FDLKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
Length = 620
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 309/688 (44%), Positives = 409/688 (59%), Gaps = 120/688 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E AST +ELN+ P+ LPSK+ CRV+
Sbjct: 1 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIEL--ASTREELNELQPICDLPSKLQCRVI 58
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 59 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYG 114
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV +KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+
Sbjct: 115 GFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFI 174
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 175 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 234
Query: 257 TMFVVYYKP----------RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
+F+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+
Sbjct: 235 CIFIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF 294
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
GT++GV DFSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L K
Sbjct: 295 GTIIGVSDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLK 352
Query: 367 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 426
NKR R E S++S L Q + QLSV +S
Sbjct: 353 NKRLREVNE-----FGSSSSHLLPPILTQGQEIGQLSV--------------------AS 387
Query: 427 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLL 486
N R + E A++ ++ + ++P P P N+ ++
Sbjct: 388 PMNISLRYRDTTE---------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMV 427
Query: 487 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 546
Q+E T+ GT+ RLFG+ L + P K P+ + S
Sbjct: 428 TQIEENITTKAGTNFRLFGVTL-----DTPPMIKDPIKQI------------------GS 464
Query: 547 DIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTK---------------------- 582
DI+K + KK Q Q SP E QSKQ +S+R+ TK
Sbjct: 465 DISKLTERKKFGQSQTLRSPIEIQSKQ--FSSSRTCTKVSIRSIYSYSLYMKLFLIVLNS 522
Query: 583 -------VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGD 635
VQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +W+I +TD +G
Sbjct: 523 HNLYMEQVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGY 582
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVK 663
MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 583 EMLVGDDPWPEFCKMVKKILIYSKEEVK 610
>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
Length = 1055
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/359 (70%), Positives = 301/359 (83%), Gaps = 4/359 (1%)
Query: 1 MANRLGSLSQ---PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ 57
MAN G S+ PSS D LY ELWKACAGPLV+VP G+RV+YFPQGHMEQL ASTNQ
Sbjct: 1 MANVDGDDSRSSFPSSYQDQLYTELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQ 60
Query: 58 EL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP 116
+ +++IP F+LP KILC+V+++ L AE +TDEVYAQITL PE Q+EPT+ DP +
Sbjct: 61 GIESEKIPDFKLPPKILCQVLSVMLKAEHDTDEVYAQITLKPEEDQSEPTSLDPPIVEPT 120
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
+ HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+ PTQELV +DLHG+EWRFK
Sbjct: 121 KQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFEWRFK 180
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR Q++MP+SVI
Sbjct: 181 HIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQNTMPASVI 240
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 296
SSQSMHLGVLATASHAV TQTMF+V+YKPR SQFI+S+NKY+EA+ + F++G R++MRFE
Sbjct: 241 SSQSMHLGVLATASHAVNTQTMFLVFYKPRISQFIVSVNKYMEAMKHGFSLGTRFRMRFE 300
Query: 297 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
GE+SPER F+GT+VG+ D S W S WRSL+VQWDEP ++ RPD+VSPWEIEPF+ S+
Sbjct: 301 GEESPERIFTGTIVGIGDLSSQWPASTWRSLQVQWDEPTTVQRPDKVSPWEIEPFLPSS 359
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 102/174 (58%), Gaps = 29/174 (16%)
Query: 489 VETGRKTETGTSC-RLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 547
V+ +SC RLFG +L ++ + P +K P+ + S AA
Sbjct: 393 VQAEPPPPPASSCYRLFGFDLTSNPPAPIPPDKQPMDT-----------SEAA------- 434
Query: 548 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
K Q+ + S KQ ++R+RTKVQMQG+AVGRA+DLT L YD LI
Sbjct: 435 -------KCQDPITPSSVNEPKKQQ---TSRTRTKVQMQGIAVGRAVDLTLLKSYDELIK 484
Query: 608 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
ELEEMF+I+GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +
Sbjct: 485 ELEEMFEIQGQLLPRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDE 538
>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 602
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 248/344 (72%), Positives = 291/344 (84%), Gaps = 1/344 (0%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSK 71
S D LY ELWK CAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ +N + IP+F LP K
Sbjct: 17 SYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPK 76
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
ILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASD
Sbjct: 77 ILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASD 136
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTG
Sbjct: 137 TSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTG 196
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASH
Sbjct: 197 WSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASH 256
Query: 252 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
AV T T+FVV+YKPR SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER F+GT+VG
Sbjct: 257 AVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVG 316
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
D S W SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 317 SGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 360
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 108/175 (61%), Gaps = 28/175 (16%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 436 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 470
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 471 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 527
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+
Sbjct: 528 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKI 582
>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
Length = 559
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/373 (69%), Positives = 300/373 (80%), Gaps = 3/373 (0%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL- 59
MAN + S D LY ELWKACAGPLV+VP+ G+RV+YFPQGHMEQL A TNQ +
Sbjct: 1 MANVDVDFRRSGSYDDQLYMELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALTNQGVV 60
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK 119
+Q IP F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +
Sbjct: 61 DQEIPDFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKQS 120
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q T TQELVA+DLHGYEWRFKHIF
Sbjct: 121 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWRFKHIF 180
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+ G+L VGVR LARQQS+MP+SVISSQ
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLARQQSTMPASVISSQ 240
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
SMHLGVLATASHAV T+T+FVV+YKPR SQFII +NKY+ A+ F +GMR++MRFEGE+
Sbjct: 241 SMHLGVLATASHAVNTKTLFVVFYKPRISQFIIGVNKYMAAMKIGFPIGMRFRMRFEGEE 300
Query: 300 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPN 358
SPER F+GT+VG D S W SKWRSL++QWDEP+++ RP++VS WEIEPF S TP
Sbjct: 301 SPERIFTGTIVGTGDLSSQWPASKWRSLQIQWDEPSTVQRPNKVSTWEIEPFSPSVLTPT 360
Query: 359 LVQPVLAKNKRPR 371
QP +K+KR R
Sbjct: 361 PTQP-QSKSKRSR 372
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 87/149 (58%), Gaps = 27/149 (18%)
Query: 493 RKTET--GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 550
+KTET + CRLFG +L++ S+AP VP L +IS S + S K
Sbjct: 436 KKTETPVTSCCRLFGFDLMSKPASTAP---VPPDKL-----LISVDSNNSGS-AKCQDPN 486
Query: 551 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 610
E+KQ+ TS RSRTKVQ QG AVGRA+DLT L YD LI+ELE
Sbjct: 487 SLTEQKQQ----------------TSTRSRTKVQKQGTAVGRAVDLTLLRSYDELINELE 530
Query: 611 EMFDIKGQLHTRTKWEIVYTDDEGDMMLV 639
+MF+I G+L + KW IV+TDDEGDMMLV
Sbjct: 531 KMFEIDGELSPKDKWAIVFTDDEGDMMLV 559
>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 613
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/355 (70%), Positives = 292/355 (82%), Gaps = 12/355 (3%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSK 71
S D LY ELWK CAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ +N + IP+F LP K
Sbjct: 17 SYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPK 76
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
ILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASD
Sbjct: 77 ILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASD 136
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTG
Sbjct: 137 TSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTG 196
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASH
Sbjct: 197 WSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASH 256
Query: 252 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER-------- 303
AV T T+FVV+YKPR SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER
Sbjct: 257 AVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETW 316
Query: 304 ---RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
RF+GT+VG D S W SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 317 NVFRFTGTIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 371
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 108/175 (61%), Gaps = 28/175 (16%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 447 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 481
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 482 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 538
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+
Sbjct: 539 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKI 593
>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/360 (70%), Positives = 300/360 (83%), Gaps = 8/360 (2%)
Query: 1 MANRLG-----SLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAST 55
MAN G SLS+ S +D+LY ELWKACAGPLV+VP G++V+YFPQGHMEQL AST
Sbjct: 1 MANVDGDDLRTSLSR--SYNDELYTELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVAST 58
Query: 56 NQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD 114
NQ + ++ IP F+LP KILCRV+++ L AE +TDEVYAQITL PE Q+E T+ DP +
Sbjct: 59 NQGIESEEIPDFKLPPKILCRVLSVMLKAEHDTDEVYAQITLKPEEDQSELTSLDPPLVE 118
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
+ HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWR
Sbjct: 119 PTKQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEWR 178
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
FKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR QS+MP+S
Sbjct: 179 FKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTS 238
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMR 294
VISSQSMHLGVLATASHAV T+T+F+V+YKPR SQFI+ +NKY+EA+ + F++G R++MR
Sbjct: 239 VISSQSMHLGVLATASHAVVTKTIFLVFYKPRISQFIVGVNKYMEAMKHGFSLGTRFRMR 298
Query: 295 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 354
FEGE+SPER F+GT+VG+ D S W S WRSL+VQWDEP + RPDRVSPWEIEPF++S
Sbjct: 299 FEGEESPERMFTGTIVGIGDLSSQWPASTWRSLQVQWDEPTTFQRPDRVSPWEIEPFLSS 358
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
+K QE + S KQ R+RTKV MQGVAVGRA+DLT L Y+ LI ELEEMF
Sbjct: 430 DKCQEPITPSAANEPKKQQ---KQRTRTKVIMQGVAVGRAVDLTLLKSYNELIKELEEMF 486
Query: 614 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+IKGQL TR KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+
Sbjct: 487 EIKGQLLTREKWVVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 539
>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/370 (68%), Positives = 296/370 (80%), Gaps = 15/370 (4%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
D LY ELWK CAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ + ++ IP+F LP KILC
Sbjct: 20 DQLYTELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVFDLPPKILC 79
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
RV+ I L AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASDTST
Sbjct: 80 RVLGITLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPTKQMFHSFVKILTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWST
Sbjct: 140 HGGFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASHAV
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259
Query: 255 TQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER----------- 303
T T+FVV+YKPR SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER
Sbjct: 260 TTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETWSVF 319
Query: 304 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS---ATPNLV 360
RF+GT+VG D S W SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A+ +TP
Sbjct: 320 RFTGTIVGTGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQ 379
Query: 361 QPVLAKNKRP 370
+ K RP
Sbjct: 380 PQLKCKRSRP 389
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 106/172 (61%), Gaps = 28/172 (16%)
Query: 500 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 559
S RLFG +L ++ + P +K P + T AA K QE
Sbjct: 453 SYRLFGFDLTSNPPAPLPQDKQP----------MDTCGAA---------------KCQEP 487
Query: 560 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 619
+ + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LI+ELEEMF+I+GQL
Sbjct: 488 ITPTSMNEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIEELEEMFEIQGQL 544
Query: 620 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+
Sbjct: 545 RPRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMATKLKI 596
>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
Length = 621
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 285/657 (43%), Positives = 391/657 (59%), Gaps = 80/657 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 195
+ +++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+ MF V YKP +SQF+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++GV D
Sbjct: 259 KCMFNVVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDM 318
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 319 SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH------ 370
Query: 376 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 435
W + ++ SN + +
Sbjct: 371 -----------------------------------------WLQLNEIGATLSNLWTCQE 389
Query: 436 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRK 494
+ SP + + + AI+D+K +S HS + P+ + N+D +++ +
Sbjct: 390 IGQRSMNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDIT 447
Query: 495 TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
TE TSC LFG++L S + P+ S + D K D
Sbjct: 448 TEATTSCLLFGVDLTK--VSKSKDSICPIESC----------KKSLPQDKKFD------- 488
Query: 555 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 614
Q Q SPKE QS + T RSR KV MQGVA+ RA+DLT + GY+ LI +LEE+FD
Sbjct: 489 --QTQPLRSPKEVQSTEFNFT--RSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFD 544
Query: 615 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
+K +L TR +WEIV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 545 LKDELRTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 601
>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 665
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/377 (67%), Positives = 303/377 (80%), Gaps = 9/377 (2%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGV 315
Query: 313 -EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR
Sbjct: 316 QENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR 375
Query: 372 LSMEVPPLDLPSAASAP 388
P LPS A+ P
Sbjct: 376 ------PPGLPSPATGP 386
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 13/188 (6%)
Query: 491 TGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDG 544
T +K G CRLFG EL+ + ++++ S V V S + +
Sbjct: 455 TEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNIN 514
Query: 545 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 604
+SDI + ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT Y+
Sbjct: 515 QSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYED 568
Query: 605 LIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
L +LEEMFDIKG+L TK W++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VK
Sbjct: 569 LFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 628
Query: 664 KMSPGSKL 671
K+SP +KL
Sbjct: 629 KLSPKNKL 636
>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 657
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/373 (67%), Positives = 297/373 (79%), Gaps = 9/373 (2%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN-QELNQRIP 64
G+ + P SD LY+ELW ACAGPLV VP+QG+RVYYFPQGHMEQLEAS + Q+L+Q +P
Sbjct: 7 GAAAGPGMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLP 66
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS 124
+F LP KILCRVVN+ L AE ++DEVYAQI L PE QNE T+ D P + + HSF
Sbjct: 67 MFDLPPKILCRVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDAEPQEREKCTAHSFC 126
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQP+
Sbjct: 127 KTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPK 186
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV+SKRLV+GD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLG
Sbjct: 187 RHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLG 246
Query: 245 VLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
VLATASHA++T T+F V+YKPRTS+ FI+S+NKYLEA K +VGMR+KMRFEG+D+PE
Sbjct: 247 VLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDDAPE 306
Query: 303 RRFSGTVVGVEDFSPH----WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
RRFSGT++G+ W DS WRSLKVQWDEP+SI RPDR+SPWE+EP A A P
Sbjct: 307 RRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDA-ANPQ 365
Query: 359 LVQPVLAKNKRPR 371
QP L + KRPR
Sbjct: 366 SPQPPL-RAKRPR 377
>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 629
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 304/681 (44%), Positives = 400/681 (58%), Gaps = 103/681 (15%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E L S + L+ + L S L RV+
Sbjct: 25 MYEQLWKLCAGPLYDIPKVGEKVYYFPQGHIEILSLSLSLSLSLSLSLSLSLSLSLSRVI 84
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L E+ +DE YA+ITL+P +Q + + RP V+SF+KVLTASDTS HGG
Sbjct: 85 AIQLKVEKNSDETYAEITLMPYTTQVVIHNQN---DNHYRPSVNSFTKVLTASDTSAHGG 141
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV RKHA ECLPPL+M++ P QEL+ DL G +WRFKH +RG P RHL+TTGW+ F T
Sbjct: 142 FSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGWNAFTT 201
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SK+LVAGD VFLRGE GEL VG+R QQ + PSS+IS SM GV+A+A HA Q
Sbjct: 202 SKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHGVIASAVHAFDNQC 261
Query: 258 MFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
MF+V KP R+SQFI+S +K+L+AVN KF VG R+ MRFEG+D ERR+SGT++GV+DF
Sbjct: 262 MFIVVCKPSIRSSQFIVSYDKFLDAVNKKFNVGSRFTMRFEGDDLSERRYSGTIIGVKDF 321
Query: 316 SPHWKDSKWRS-------------LKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
SPHW +S+WRS L+V+WDE AS RPD+VSPWEIE + N+++
Sbjct: 322 SPHWIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIEHL--TPLSNVLRS 379
Query: 363 VLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHS 422
L KNKR R E+
Sbjct: 380 SLLKNKRSREVNEIG--------------------------------------------- 394
Query: 423 DFSSNSNFMSRTQSDGEWLTSPRVKFSQQL---FQEAIDDNKNISAWPAHSGHSTPHPSK 479
S++S+ + + + + P + + + +++A +D + P+ S P P+
Sbjct: 395 --STSSHLLPPISTQDQEIGQPSMIYPMNVLPSYRDATED----AEIPSRLLISYPVPTM 448
Query: 480 P----NNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIIS 534
P NN+ ++ +E T SCRLFG+ L + PSE K P+
Sbjct: 449 PKLTYNNNQMVTPLEKNITTNASASCRLFGVSL------ATPSEIKDPIDQ--------- 493
Query: 535 TISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 592
DS S+I+K +EKK Q S +E QSKQ L+S RS TKVQM+GV VGR
Sbjct: 494 -----QDSYQISEISKLSQEKKFGLGQTLTSAREIQSKQ--LSSTRSCTKVQMEGVTVGR 546
Query: 593 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
ALDL+ L GYD LI ELE++FD+ GQL TR +WEI + D+EGD M VGDDPW EFCNMVK
Sbjct: 547 ALDLSVLNGYDQLILELEKLFDLNGQLQTRNQWEISFIDNEGDKMFVGDDPWPEFCNMVK 606
Query: 653 RIFICSSQDVKKMSPGSKLPM 673
RI I + + VK + L +
Sbjct: 607 RIIIYTKEKVKNLKSEQSLKL 627
>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
Length = 661
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/346 (70%), Positives = 284/346 (82%), Gaps = 6/346 (1%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD LYRELW ACAGPLV VP+QG+RVYYFPQGHMEQLEAST+Q+L+Q +P+F LP KILC
Sbjct: 21 SDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLDQYLPMFNLPPKILC 80
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE QNE T+ DP P + + HSF K LTASDTST
Sbjct: 81 SVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDPEPQEPEKCTAHSFCKTLTASDTST 140
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+ + P QELVAKDLHG EW F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLGVLATASHA++
Sbjct: 201 FVSSKRLVAGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAIS 260
Query: 255 TQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRTS+ FI+S+NKYLEA K +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 261 TGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDEAPERRFSGTIIGI 320
Query: 313 EDFSPH----WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 354
W DS WRSLKVQWDEP+SI RPDR+SPWE+EP A+
Sbjct: 321 GSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDAA 366
>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 805
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/390 (65%), Positives = 305/390 (78%), Gaps = 13/390 (3%)
Query: 2 ANRLGSLSQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
A + SQP SNS D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ
Sbjct: 4 ATAMAPPSQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAG 63
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRP 118
++ L+ LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q + P PA SPRP
Sbjct: 64 NQMRLYDLPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRP 123
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HI
Sbjct: 124 AVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHI 183
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISS
Sbjct: 184 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISS 243
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFE 296
QSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFE
Sbjct: 244 QSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFE 303
Query: 297 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 356
GE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+
Sbjct: 304 GEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSP 361
Query: 357 PNLVQPVL--AKNKRPRLSMEVPPLDLPSA 384
P V P++ ++ KRPR VPP L S+
Sbjct: 362 P--VNPLVHSSRAKRPR--QNVPPPSLESS 387
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 543
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 600 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 655
Query: 544 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 656 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 602 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 773
Query: 661 DVKKMSPGSKLP 672
+V+KM+ S P
Sbjct: 774 EVQKMNSKSAAP 785
>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
Length = 1673
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/377 (67%), Positives = 300/377 (79%), Gaps = 16/377 (4%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+RELW ACAGPLV VPK+G+RVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 14 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILC 73
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTST
Sbjct: 74 SVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 134 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 194 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 253
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F V+YKPRT S+F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGI 313
Query: 313 EDF-----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L +N
Sbjct: 314 GSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL-RN 370
Query: 368 KR------PRLSMEVPP 378
KR P + E+PP
Sbjct: 371 KRARPPASPSVVAELPP 387
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 6/86 (6%)
Query: 563 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-T 621
SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY L +LEEMFDI+G L T
Sbjct: 415 SPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPT 469
Query: 622 RTKWEIVYTDDEGDMMLVGDDPWHEF 647
+W++VYTDDE DMMLVGDDPW +F
Sbjct: 470 LKRWQVVYTDDEDDMMLVGDDPWEKF 495
>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
gi|238014618|gb|ACR38344.1| unknown [Zea mays]
gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
Length = 511
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/365 (68%), Positives = 297/365 (81%), Gaps = 8/365 (2%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D L+RELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LP KI
Sbjct: 12 SAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFDLPPKI 71
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LC+VVN+ L AE ++DEVYAQI L PE Q+EPT+PD P + R V+SF K LTASDT
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQPEADQSEPTSPDSEPPEPERCNVYSFCKTLTASDT 131
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLR+HA ECLP LDM Q+ P QEL+AKDLHG EW F+HIFRGQPRRHLLTTGW
Sbjct: 132 STHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTTGW 191
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS +MHLGVLATASHA
Sbjct: 192 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLATASHA 251
Query: 253 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
++T T+F V+YKPRT S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERR SGT++
Sbjct: 252 ISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESPERRLSGTII 311
Query: 311 GVEDFSPH----WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
G+ + W +S WRSL+VQWDEP++I RPDRVSPWE+EP A+ P QP L +
Sbjct: 312 GLGSMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDAT-NPQPPQPHL-R 369
Query: 367 NKRPR 371
NKR R
Sbjct: 370 NKRAR 374
>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 822
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/390 (65%), Positives = 305/390 (78%), Gaps = 13/390 (3%)
Query: 2 ANRLGSLSQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
A + SQP SNS D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ
Sbjct: 4 ATAMAPPSQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAG 63
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRP 118
++ L+ LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q + P PA SPRP
Sbjct: 64 NQMRLYDLPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRP 123
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HI
Sbjct: 124 AVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHI 183
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISS
Sbjct: 184 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISS 243
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFE 296
QSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFE
Sbjct: 244 QSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFE 303
Query: 297 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 356
GE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+
Sbjct: 304 GEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSP 361
Query: 357 PNLVQPVL--AKNKRPRLSMEVPPLDLPSA 384
P V P++ ++ KRPR VPP L S+
Sbjct: 362 P--VNPLVHSSRAKRPR--QNVPPPSLESS 387
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 19/164 (11%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 543
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 600 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 655
Query: 544 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 656 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 602 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 644
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPW 757
>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
Length = 799
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/383 (66%), Positives = 303/383 (79%), Gaps = 13/383 (3%)
Query: 9 SQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR 67
SQP SNS D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ ++ L+
Sbjct: 5 SQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYD 64
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSK 125
LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q + P PA SPRP V SF K
Sbjct: 65 LPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCK 124
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRR
Sbjct: 125 TLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRR 184
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGV
Sbjct: 185 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGV 244
Query: 246 LATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
LATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+
Sbjct: 245 LATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQ 304
Query: 304 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V P+
Sbjct: 305 RFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPL 360
Query: 364 L--AKNKRPRLSMEVPPLDLPSA 384
+ ++ KRPR VPP L S+
Sbjct: 361 VHSSRAKRPR--QNVPPPSLESS 381
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 543
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 594 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 649
Query: 544 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 650 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 707
Query: 602 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 708 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 767
Query: 661 DVKKMSPGSKLP 672
+V+KM+ S P
Sbjct: 768 EVQKMNSKSAAP 779
>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
Length = 673
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/359 (68%), Positives = 295/359 (82%), Gaps = 4/359 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LYRELW ACAGPLV +P+ G+RVYYFPQGHMEQLEAS +Q L ++P F LPSKILC+
Sbjct: 17 DPLYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSKILCK 76
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ AE +TDEVYAQITL+PE Q+E +PD + R VHSF K LTASDTSTH
Sbjct: 77 VASVQRKAEPDTDEVYAQITLVPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTH 136
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA +CLPPLDM Q P QEL+A DLHG EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SK+LVAGD F+FLRG NG+L VGVR L RQQ++MPSSVISS SMHLGVLATAS+A++T
Sbjct: 197 VSSKKLVAGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLGVLATASYALST 256
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
++MF ++YKPRT S+FI+S+NKYLEA ++K +VGMR+KMRFEGE+ PERRFSGT+VGVE
Sbjct: 257 RSMFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVE 316
Query: 314 -DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
D S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP VA++ ++ QP +NKR R
Sbjct: 317 ADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPA-QRNKRAR 374
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 16/189 (8%)
Query: 493 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI-SAAADSDGKSDIAKE 551
RK TG CRLFGI+LI++ E P+++++ G + S A+SD +SD +
Sbjct: 462 RKQGTGNGCRLFGIQLIDNINME---ENSPLATISGTGVNDQPLHSLDANSDQQSDPSNL 518
Query: 552 FKEK------KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 605
+ + E+ SP+ESQSKQ RS TKV MQG+AVGRA+DLT Y+ L
Sbjct: 519 NQSDLPSISCEPEKCLRSPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDCYEDL 573
Query: 606 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 664
+ +LE MFDIKGQL TK W++VYTDDE DMM+VGDDPW+EFC+MV++IFI +S++V+K
Sbjct: 574 LKKLEYMFDIKGQLCGSTKNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVRK 633
Query: 665 MSPGSKLPM 673
+SP KLP+
Sbjct: 634 LSPKIKLPV 642
>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
Length = 846
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/361 (67%), Positives = 295/361 (81%), Gaps = 6/361 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW++CAGPLV VP++G+ VYYFPQGH+EQ+EASTNQ +Q++PL+ LPSKILCRVV
Sbjct: 40 LYTELWRSCAGPLVTVPREGELVYYFPQGHIEQVEASTNQVADQQMPLYNLPSKILCRVV 99
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQ+TL+PEP+Q+E +P PR VHSF K LTASDTSTHG
Sbjct: 100 NVLLKAEPDTDEVYAQVTLMPEPNQDENAVKKEPMRPPPPRFHVHSFCKTLTASDTSTHG 159
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 160 GFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 219
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ + PSSVISS SMHLGVLATA HA+ T+
Sbjct: 220 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNAPSSVISSHSMHLGVLATAWHAIQTK 279
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ + Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 280 TMFTVYYKPRTSPAEFIVPYDHYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 339
Query: 315 FSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
P W +SKWR LKV+WDE +SI RPDRVSPW+IEP A + P L P +A+ KRPR S
Sbjct: 340 ADPQRWLESKWRCLKVRWDENSSIPRPDRVSPWKIEP--ALSPPALNVPPVARPKRPRSS 397
Query: 374 M 374
+
Sbjct: 398 I 398
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 126/223 (56%), Gaps = 24/223 (10%)
Query: 463 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSA-----P 517
+S + S HS KP ++++Q E + E + +LFGI L ++ + A
Sbjct: 598 VSPYMQLSSHSREMMHKP---SVVKQPEAVKPKEG--NYKLFGIPLTSNVCTDAVMMRKS 652
Query: 518 SEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK----------EKKQEQVQVSPKES 567
S P S + H ++ A DSD +S+ +K K +K+ ++ ++
Sbjct: 653 SLIDPASDMNIGIHPHQSL--ATDSDQRSEQSKGSKVDDGVAANDHDKQFHTFHLAARDK 710
Query: 568 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WE 626
K +S RS TKV QG A+GR++DL YD LI EL+++FD G+L R+K W
Sbjct: 711 DGKGHS-SSTRSCTKVHKQGTALGRSVDLAKFNNYDELIAELDQLFDFNGELKARSKSWL 769
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
+VYTDDEGDMMLVGDDPW EFC MV++IFI + ++V++M+PG+
Sbjct: 770 VVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVQRMNPGT 812
>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/362 (67%), Positives = 294/362 (81%), Gaps = 14/362 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ L AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTS
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTS 174
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 254 ATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+T TMF VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG
Sbjct: 295 STGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 369
+E+ P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KR
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411
Query: 370 PR 371
PR
Sbjct: 412 PR 413
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 488 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 544
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 545 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 662 VKKMSPGS 669
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/362 (67%), Positives = 294/362 (81%), Gaps = 14/362 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ L AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTS
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTS 174
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 254 ATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+T TMF VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG
Sbjct: 295 STGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 369
+E+ P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KR
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411
Query: 370 PR 371
PR
Sbjct: 412 PR 413
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 488 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 544
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 545 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 662 VKKMSPGS 669
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
protein; Short=ARF1-BP; AltName: Full=Protein
MEGAINTEGUMENTA
gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 859
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/362 (67%), Positives = 294/362 (81%), Gaps = 14/362 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ L AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTS
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTS 174
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 254 ATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+T TMF VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG
Sbjct: 295 STGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 369
+E+ P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KR
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411
Query: 370 PR 371
PR
Sbjct: 412 PR 413
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 488 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 544
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 545 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 662 VKKMSPGS 669
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
Length = 854
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/359 (68%), Positives = 294/359 (81%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPEP+Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEPNQDENVIEKETPPPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 357
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 371
P W SKWRSLKV+WDE +SI RPDRVSPW+IEP +A P + PV + + KRPR
Sbjct: 358 SDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKRPR 413
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 9/176 (5%)
Query: 500 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 559
+CRLFGI L+N+ + A S ++L + T A SD +K K ++
Sbjct: 648 NCRLFGIPLVNN-MNGADSTMAQRNNLKDAAGLTQT--APPKVQDLSDQSKGSKSTNDQR 704
Query: 560 VQVSPKES-----QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 614
Q P ++ + + S+RS TKV QG+A+GR++DL+ Y+ LI EL+ +F+
Sbjct: 705 EQGRPFQTNHPHPKDAHTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFE 764
Query: 615 IKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
G+L K W IVYTDDE DMM VGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 765 FNGELMAPKKDWLIVYTDDENDMMRVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 820
>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 853
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/359 (67%), Positives = 292/359 (81%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP-ADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPE +Q+E P PR +VHSF K LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEE 357
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 371
P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 358 SDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 488 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 544
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 545 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 662 VKKMSPGS 669
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
Length = 808
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/368 (66%), Positives = 294/368 (79%), Gaps = 10/368 (2%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q SS D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LP
Sbjct: 13 QGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLP 72
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---RPKVHSFSKV 126
SK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE P P RP V SF K
Sbjct: 73 SKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKT 132
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRRH
Sbjct: 133 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRH 192
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVL
Sbjct: 193 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVL 252
Query: 247 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
ATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N ++VGMR++MRFEGE++PE+R
Sbjct: 253 ATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQR 312
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 363
F+GT++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+
Sbjct: 313 FTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLP 368
Query: 364 LAKNKRPR 371
L++ KRPR
Sbjct: 369 LSRVKRPR 376
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 669 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 727
Query: 614 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 672
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 728 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 787
>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
Length = 803
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/369 (66%), Positives = 297/369 (80%), Gaps = 12/369 (3%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q SS D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LP
Sbjct: 8 QGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLP 67
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSK 125
SK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP V SF K
Sbjct: 68 SKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPVRSFCK 126
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRR
Sbjct: 127 TLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRR 186
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGV
Sbjct: 187 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGV 246
Query: 246 LATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
LATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N ++VGMR++MRFEGE++PE+
Sbjct: 247 LATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQ 306
Query: 304 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
RF+GT++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+
Sbjct: 307 RFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPL 362
Query: 364 -LAKNKRPR 371
L++ KRPR
Sbjct: 363 PLSRVKRPR 371
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 664 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 722
Query: 614 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 672
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 723 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 782
>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
Length = 851
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/362 (67%), Positives = 294/362 (81%), Gaps = 8/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSKILCRV+
Sbjct: 54 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 113
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPEP Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 114 NVDLKAEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCKTLTASDTSTHG 173
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 293
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 294 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 353
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
P W SKWRSLKV+WDE SI RPDRVSPW+IEP + +P + PV + + KRPR
Sbjct: 354 SDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPAL---SPPALSPVPMPRPKRPRS 410
Query: 373 SM 374
++
Sbjct: 411 NL 412
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
Query: 500 SCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKK 556
+CRLFGI L+N+ T + S++ ++ T I S + +D S + +E+
Sbjct: 645 NCRLFGIPLVNNVNGTDTTLSQRNNLNDCTGPTQIASPKVQDLSDQSKGSKSTNDHREQG 704
Query: 557 QE--QVQVSPKESQSK-QSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
+ + PK+ Q+K SC RS TKVQ QG+A+GR++DL+ Y+ L+ EL+ +F
Sbjct: 705 RPFPVNKPHPKDVQTKTNSC----RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLF 760
Query: 614 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 761 EFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 817
>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
Length = 678
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/359 (67%), Positives = 292/359 (81%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP-ADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPE +Q+E P PR +VHSF K LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEE 357
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 371
P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 358 SDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
Length = 791
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/362 (66%), Positives = 291/362 (80%), Gaps = 10/362 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LPSK+LCR
Sbjct: 2 DPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCR 61
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---RPKVHSFSKVLTASDT 132
V+N+ L AEQ+TDEVYAQ+ L+PEP QNE P P RP V SF K LTASDT
Sbjct: 62 VLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDT 121
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRRHLL +GW
Sbjct: 122 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGW 181
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA
Sbjct: 182 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHA 241
Query: 253 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
+ T++MF VYYKPRT S+FII ++Y+E+V N ++VGMR++MRFEGE++PE+RF+GT++
Sbjct: 242 INTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTGTII 301
Query: 311 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 369
G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+ L++ KR
Sbjct: 302 GSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLPLSRVKR 357
Query: 370 PR 371
PR
Sbjct: 358 PR 359
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 652 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 710
Query: 614 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 672
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 711 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 770
>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
Length = 704
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/371 (65%), Positives = 294/371 (79%), Gaps = 6/371 (1%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ ++ L+ LPS
Sbjct: 14 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPS 73
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP Q + A SPRP V SF K LT
Sbjct: 74 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVAAEKASSASAASPRPAVRSFCKTLT 133
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 134 ASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 193
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 194 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 253
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+
Sbjct: 254 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFT 313
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
GT+VG E+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P P+ ++
Sbjct: 314 GTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPPVNPLPLSSR 371
Query: 367 NKRPRLSMEVP 377
KRPR + P
Sbjct: 372 VKRPRQNAPPP 382
>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/381 (65%), Positives = 303/381 (79%), Gaps = 9/381 (2%)
Query: 1 MANRLGSLSQPSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ 57
M + G + PSS D LY ELW ACAGPLV VP++G V+YFPQGH+EQ+EASTNQ
Sbjct: 30 MEGQKGHSTHPSSARDAETALYNELWHACAGPLVTVPREGDHVFYFPQGHLEQVEASTNQ 89
Query: 58 ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSP 116
+Q++PL+ LP KILCRVVN+ L AE +TDEV+AQ+TLLP +Q+E + +P P P
Sbjct: 90 VADQQMPLYDLPPKILCRVVNVQLKAEPDTDEVFAQVTLLPLHNQDENASEKEPPPPPPP 149
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
R VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+
Sbjct: 150 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFR 209
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQS++PSSVI
Sbjct: 210 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVI 269
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR 294
SS SMHLGVLATA HAV+T TMF VYYKPRTS +FI+ ++Y+E+V + +++GMR+KMR
Sbjct: 270 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKSNYSIGMRFKMR 329
Query: 295 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
FEGE++PE+RF+GT+VG+ED P WKDSKWR LKV+WDE ++I RPDRVSPW+IEP A
Sbjct: 330 FEGEEAPEQRFTGTIVGIEDADPSRWKDSKWRCLKVRWDETSTIPRPDRVSPWKIEP--A 387
Query: 354 SATPNLVQPVLAKNKRPRLSM 374
A P L + + KRPR +M
Sbjct: 388 LAPPALNPLPMPRPKRPRANM 408
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 20/212 (9%)
Query: 468 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 527
AH+ P P L+++ TG+ + +C+LFGI L + A E+ +++
Sbjct: 619 AHTRELIPKPK------LVQEHNTGKSLDG--NCKLFGIPL--KISKPATPEQAGPTNMV 668
Query: 528 TE--GHII-STISAAADSDGKSD------IAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 578
E GH ++ ++SD KS+ +A E + +K QV ++ +S R
Sbjct: 669 NEPMGHTQPASHQLTSESDQKSEHSRGSKLADENENEKPLQVGHMRMRDSHGKAQNSSTR 728
Query: 579 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMM 637
S TKV QG+A+GR++DLT YD LI EL+ +F+ G+L K W IVYTDDE DMM
Sbjct: 729 SCTKVHKQGIALGRSVDLTRFNNYDELIAELDRLFEFNGELLAPQKNWLIVYTDDEDDMM 788
Query: 638 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
LVGDDPW EF MV++I I + ++V+++ PG+
Sbjct: 789 LVGDDPWQEFVGMVRKIVIYTREEVQRIKPGT 820
>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 806
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/372 (65%), Positives = 295/372 (79%), Gaps = 9/372 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + L+ LPS
Sbjct: 13 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPS 72
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP QN+ A PRP V SF K LT
Sbjct: 73 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 133 ASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 193 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 252
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+
Sbjct: 253 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFT 312
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LA 365
GT+VG E+ P W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+ L+
Sbjct: 313 GTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLPLS 368
Query: 366 KNKRPRLSMEVP 377
+ KRPR + P
Sbjct: 369 RGKRPRQNAPPP 380
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 552
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 602 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 657
Query: 553 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 658 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 716
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+I + ++
Sbjct: 717 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEE 776
Query: 662 VKKMSPGSKLP 672
V+KM+ S +P
Sbjct: 777 VQKMNSKSSVP 787
>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
Length = 801
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/372 (65%), Positives = 295/372 (79%), Gaps = 9/372 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + L+ LPS
Sbjct: 8 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPS 67
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP QN+ A PRP V SF K LT
Sbjct: 68 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLT 127
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 128 ASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 187
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 188 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 247
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+
Sbjct: 248 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFT 307
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LA 365
GT+VG E+ P W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+ L+
Sbjct: 308 GTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLPLS 363
Query: 366 KNKRPRLSMEVP 377
+ KRPR + P
Sbjct: 364 RGKRPRQNAPPP 375
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 552
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 597 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 652
Query: 553 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 653 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 711
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+I + ++
Sbjct: 712 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEE 771
Query: 662 VKKMSPGSKLP 672
V+KM+ S +P
Sbjct: 772 VQKMNSKSSVP 782
>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 812
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/372 (65%), Positives = 295/372 (79%), Gaps = 9/372 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + L+ LPS
Sbjct: 13 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPS 72
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP QN+ A PRP V SF K LT
Sbjct: 73 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 133 ASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 193 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 252
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+
Sbjct: 253 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFT 312
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LA 365
GT+VG E+ P W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+ L+
Sbjct: 313 GTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLPLS 368
Query: 366 KNKRPRLSMEVP 377
+ KRPR + P
Sbjct: 369 RGKRPRQNAPPP 380
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 23/197 (11%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 552
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 602 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAI--REHVVQTRPSAPVNELQPVQIECL 657
Query: 553 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 658 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 716
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW------HEFCNMVKRIF 655
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+
Sbjct: 717 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWDPLLTSREFCNIVRKIY 776
Query: 656 ICSSQDVKKMSPGSKLP 672
I + ++V+KM+ S +P
Sbjct: 777 IYTKEEVQKMNSKSSVP 793
>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
Length = 846
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/361 (67%), Positives = 296/361 (81%), Gaps = 6/361 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++G+RVYYFPQGH+EQ+EASTNQ +Q++P++ LPSKILCRV+
Sbjct: 45 LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPE +Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T
Sbjct: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
Query: 315 FSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
P W+DSKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR +
Sbjct: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSPWKIEP--ALAPPALNSLPMPRPKRPRSN 402
Query: 374 M 374
M
Sbjct: 403 M 403
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 107/188 (56%), Gaps = 22/188 (11%)
Query: 496 ETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA---AADSDGKSDIAK 550
E G S C+LFGI L ++ P VS T + A +SD KS+ +K
Sbjct: 628 EAGKSKDCKLFGIPLFSNHVMPEPV----VSHRNTMNEPAGNLDQQFRAFESDQKSEHSK 683
Query: 551 EFK-----------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 599
K EK + Q K+ +SK C S RS TKVQ QG+A+GR++DL+
Sbjct: 684 SSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQC-GSTRSCTKVQKQGIALGRSVDLSKF 742
Query: 600 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
YD LI EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW EFC MV++IFI +
Sbjct: 743 NNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYT 802
Query: 659 SQDVKKMS 666
++V KM+
Sbjct: 803 KEEVLKMN 810
>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 728
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/372 (65%), Positives = 295/372 (79%), Gaps = 9/372 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + L+ LPS
Sbjct: 13 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPS 72
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP QN+ A PRP V SF K LT
Sbjct: 73 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 133 ASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 193 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 252
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+
Sbjct: 253 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFT 312
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LA 365
GT+VG E+ P W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+ L+
Sbjct: 313 GTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLPLS 368
Query: 366 KNKRPRLSMEVP 377
+ KRPR + P
Sbjct: 369 RGKRPRQNAPPP 380
>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/359 (67%), Positives = 292/359 (81%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 54 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 113
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPE +Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 114 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 173
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 293
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 294 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 353
Query: 315 FS-PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 371
W SKWRSLKV+WDE +SI RPDRVSPW+IEP +A P + PV + + KRPR
Sbjct: 354 SDITRWPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKRPR 409
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 488 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 544
Q ET + E +CRLFGI L N+ T SA S++ ++ + S + D
Sbjct: 643 QEETAKSREG--NCRLFGIPLSNNMNGTDSAMSQRSNLNDAAGLTQLASPKVQDLPDQSK 700
Query: 545 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
S + +E+ + + PK++ +K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAHTKSN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
+ LI EL+ +F+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELIAELDRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 662 VKKMSPGS 669
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
Length = 848
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/362 (67%), Positives = 293/362 (80%), Gaps = 8/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSKILCRV+
Sbjct: 53 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 112
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPEP Q+E + + P PR +VHSF K LTASDTSTHG
Sbjct: 113 NVDLKAEADTDEVYAQITLLPEPVQDENSIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 172
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 173 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFV 232
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 233 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 292
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y E+V +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 293 TMFTVYYKPRTSPSEFIVPFDQYTESVKINYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 352
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
P W SKWRSLKV+WDE SI RPDRVSPW+IEP + +P + PV + + KRPR
Sbjct: 353 SDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPAL---SPPALSPVPMPRPKRPRS 409
Query: 373 SM 374
++
Sbjct: 410 NL 411
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 500 SCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKK 556
+CRLFGI L+N+ T + S++ ++ + S + +D S + +E+
Sbjct: 642 NCRLFGIPLVNNVNGTDTTLSQRNNLNDPAGPTQMASPKVQDLSDQSKGSKSTNDHREQG 701
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
+ VS + Q+ S RS TKVQ QG+A+GR++DL+ Y+ L+ EL+ +F+
Sbjct: 702 RP-FPVSKPHPKDVQTKTNSCRSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFN 760
Query: 617 GQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 761 GELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 814
>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
Length = 769
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/363 (65%), Positives = 295/363 (81%), Gaps = 6/363 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY+ELW ACAGPLV VP+ G+RV+YFPQGH+EQ+EASTNQ +Q++P + L +KILCR
Sbjct: 8 DALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILCR 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTST 134
V+N+HL AE +TDEV+AQ+TLLPEP Q+E + + +PRP+VHSF K LTASDTST
Sbjct: 68 VINVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 128 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSL 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGENGEL VGVR RQ S+ PSSVISS SMHLGVLATA HAV+
Sbjct: 188 FVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVS 247
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F VYYKPRTS +FII ++Y+EAV N +++GMR+KM+FEGE++PE+RF+GTV+G
Sbjct: 248 TGTIFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTVIGT 307
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
ED P W SKWR LKV+WDE +S+ RP+ VSPW IE VA P+L ++++KRPR
Sbjct: 308 EDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIE--VALTPPSLNPLPVSRSKRPR 365
Query: 372 LSM 374
+M
Sbjct: 366 ANM 368
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 10/205 (4%)
Query: 467 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSA---PSEKVPV 523
P +TPH L Q E + G +C+LFGI LI+ ++ P ++ +
Sbjct: 530 PHSYSETTPHLMGLKPQPLYVQEEVVKSKGDG-NCKLFGISLISKPAANPMHRPQGEIQL 588
Query: 524 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 583
+ H + S+ G + K F+ +Q Q+S ++ QSK S RS KV
Sbjct: 589 TMENPARHPEQSKSSKYMEIGGFEHEKPFQALEQ---QLS-RDDQSKLHS-GSTRSCIKV 643
Query: 584 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDD 642
QG+AVGR++DLT GY LI EL+++F+ G+L + K W IV+TDDEGDMMLVGDD
Sbjct: 644 HKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEGDMMLVGDD 703
Query: 643 PWHEFCNMVKRIFICSSQDVKKMSP 667
PW EFC+MV++IF+ + +++++M P
Sbjct: 704 PWPEFCSMVRKIFVYTREEIQRMDP 728
>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/363 (65%), Positives = 295/363 (81%), Gaps = 6/363 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY+ELW ACAGPLV VP+ G+RV+YFPQGH+EQ+EASTNQ +Q++P + L +KILCR
Sbjct: 8 DALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILCR 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTST 134
V+N+HL AE +TDEV+AQ+TLLPEP Q+E + + +PRP+VHSF K LTASDTST
Sbjct: 68 VINVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 128 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSL 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGENGEL VGVR RQ S+ PSSVISS SMHLGVLATA HAV+
Sbjct: 188 FVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVS 247
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T T+F VYYKPRTS +FII ++Y+EAV N +++GMR+KM+FEGE++PE+RF+GTV+G
Sbjct: 248 TGTIFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTVIGT 307
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
ED P W SKWR LKV+WDE +S+ RP+ VSPW IE VA P+L ++++KRPR
Sbjct: 308 EDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIE--VALTPPSLNPLPVSRSKRPR 365
Query: 372 LSM 374
+M
Sbjct: 366 ANM 368
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 10/205 (4%)
Query: 467 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSA---PSEKVPV 523
P +TPH L Q E + G +C+LFGI LI+ ++ P ++ +
Sbjct: 530 PHSYSETTPHLMGLKPQPLYVQEEVVKSKGDG-NCKLFGISLISKPAANPMHRPQGEIQL 588
Query: 524 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 583
+ H + S+ G + K F+ +Q Q+S ++ QSK S RS KV
Sbjct: 589 TMENPARHPEQSKSSKYMEIGGFEHEKPFQALEQ---QLS-RDDQSKLHS-GSTRSCIKV 643
Query: 584 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDD 642
QG+AVGR++DLT GY LI EL+++F+ G+L + K W IV+TDDEGDMMLVGDD
Sbjct: 644 HKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEGDMMLVGDD 703
Query: 643 PWHEFCNMVKRIFICSSQDVKKMSP 667
PW EFC+MV++IF+ + +++++M P
Sbjct: 704 PWPEFCSMVRKIFVYTREEIQRMDP 728
>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 858
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/358 (66%), Positives = 289/358 (80%), Gaps = 6/358 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++G+RV+YFPQGH+EQ+EASTNQ Q +P++ LP KILCRV+
Sbjct: 54 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVI 113
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 114 NVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAAPPRFHVHSFCKTLTASDTSTHG 173
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 293
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 294 TMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIED 353
Query: 315 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
+ W SKWRSLKV+WDE ++I RP+RVS W+IEP A A P L + + KRPR
Sbjct: 354 ADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEP--ALAPPALNPLPMPRPKRPR 409
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 122/216 (56%), Gaps = 22/216 (10%)
Query: 473 STPHPSKPNNDTLLEQVETGRKTETG----TSCRLFGIELINHATSSAPS---EKVPVSS 525
STP+ S P + LL + +G+ E + C+LFGI L++ + PS VP S
Sbjct: 614 STPYES-PRSRELLPKPISGKPCEVSKPKDSDCKLFGISLLSSPIAPEPSVSQRNVP-SE 671
Query: 526 LTTEGHIISTISAAADSDGKSDIAK-----------EFKEKKQEQVQVSPKESQSKQSCL 574
H S A D+D KS+ ++ + EK + Q K+ Q+K S
Sbjct: 672 PVGHMHTTSHQQRAFDNDQKSEHSRGGSKPADGLLIDDHEKVLQTSQTHLKDIQAK-SHS 730
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
S RS TKV +G+A+GR++DLT Y LI EL+++F+ G L + K W IVYTD+E
Sbjct: 731 GSARSCTKVHKKGIALGRSVDLTKFSDYGELIAELDQLFEFGGLLTSPQKDWLIVYTDNE 790
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
GDMMLVGDDPW EF MV++I+I ++++KMSPG+
Sbjct: 791 GDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGT 826
>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/362 (66%), Positives = 297/362 (82%), Gaps = 8/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ +Q++P++ LPSKILCRV+
Sbjct: 57 LYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLPSKILCRVI 116
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 117 NVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHG 176
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 177 GFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 236
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA +T
Sbjct: 237 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTG 296
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 297 TMFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 356
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
P W+DSKWR LKV+WDE ++I RPDRVSPW+IEP V TP + P+ + + KRPR
Sbjct: 357 ADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAV---TPPALNPLPVPRPKRPRS 413
Query: 373 SM 374
+M
Sbjct: 414 NM 415
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 127/215 (59%), Gaps = 24/215 (11%)
Query: 468 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 527
AHS P P +L Q + K + G +C+LFGI LI + S P+ + S+T
Sbjct: 625 AHSRELMPKP-------ILVQKQEAVKPKDG-NCKLFGIPLIGNPVISEPA--MSYRSMT 674
Query: 528 TE--GHIISTISAAADSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCL--T 575
E GH+ +A DSD KS+ +K K ++++ Q S S+ Q +
Sbjct: 675 NEPAGHL-HLAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSV 733
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEG 634
S RS TKV QG+A+GR++DLT YD LI EL+++F+ G+L K W IVYTDDEG
Sbjct: 734 STRSCTKVHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEG 793
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
DMMLVGDDPW EFC MV++I+I + ++V++M+PG+
Sbjct: 794 DMMLVGDDPWQEFCGMVRKIYIYTREEVQRMNPGT 828
>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
Length = 840
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 293/361 (81%), Gaps = 6/361 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EAST+Q +Q++P++ LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+HL AE ETDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHG
Sbjct: 101 NVHLKAEPETDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G ED
Sbjct: 281 TMFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCED 340
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
P WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR +
Sbjct: 341 ADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPRSN 398
Query: 374 M 374
M
Sbjct: 399 M 399
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 125/206 (60%), Gaps = 18/206 (8%)
Query: 472 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS---SLTT 528
HS+ SKP +L Q + K + G +C+LFGI L+ + P+ PV ++
Sbjct: 612 HSSELMSKP----MLFQNQDILKPKDG-NCKLFGISLVKN-----PAIPDPVGLNRNMMN 661
Query: 529 EGHII-STISA--AADSDGKSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQ 584
E ++ S + + +S KS++ + K K + + K Q+ +S TS RS TKV
Sbjct: 662 EADVMHSNVHQIHSIESGLKSELPRGSKLADKSVAISEADKLQQTCKSQGTSARSCTKVH 721
Query: 585 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDP 643
QG+A+GR++DL+ YD L+ EL+++F+ G+L K W IVYTDDEGDMMLVGDDP
Sbjct: 722 KQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAPKKNWLIVYTDDEGDMMLVGDDP 781
Query: 644 WHEFCNMVKRIFICSSQDVKKMSPGS 669
W EFC MV++IFI + ++V+KM+PGS
Sbjct: 782 WREFCGMVRKIFIYTREEVQKMNPGS 807
>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
Length = 946
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/362 (66%), Positives = 297/362 (82%), Gaps = 8/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ +Q++P++ LPSKILCRV+
Sbjct: 57 LYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLPSKILCRVI 116
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 117 NVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHG 176
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 177 GFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 236
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA +T
Sbjct: 237 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTG 296
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 297 TMFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 356
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
P W+DSKWR LKV+WDE ++I RPDRVSPW+IEP V TP + P+ + + KRPR
Sbjct: 357 ADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAV---TPPALNPLPVPRPKRPRS 413
Query: 373 SM 374
+M
Sbjct: 414 NM 415
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 69/260 (26%)
Query: 468 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 527
AHS P P +L Q + K + G +C+LFGI LI + S P+ + S+T
Sbjct: 625 AHSRELMPKP-------ILVQKQEAVKPKDG-NCKLFGIPLIGNPVISEPA--MSYRSMT 674
Query: 528 TE--GHIISTISAAADSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCL--T 575
E GH+ +A DSD KS+ +K K ++++ Q S S+ Q +
Sbjct: 675 NEPAGHL-HLAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSV 733
Query: 576 SNRSRTKVQM---------------------------------------------QGVAV 590
S RS TKV + QG+A+
Sbjct: 734 STRSCTKVCIHSLDGCWFLNNEYEIWKMLAGYKIVPQICFIAVSCLMSIGNLVHKQGIAL 793
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 649
GR++DLT YD LI EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW EFC
Sbjct: 794 GRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCG 853
Query: 650 MVKRIFICSSQDVKKMSPGS 669
MV++I+I + ++V++M+PG+
Sbjct: 854 MVRKIYIYTREEVQRMNPGT 873
>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/376 (64%), Positives = 295/376 (78%), Gaps = 12/376 (3%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q S D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ ++ L+ LP
Sbjct: 10 QAPSAGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLP 69
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE---PTTPDPCPADSPRPKVHSFSKV 126
K+LCRV+N+ L AE +TDEVYAQ+ L+PEP QNE + A PRP V SF K
Sbjct: 70 PKLLCRVINVELKAEADTDEVYAQVMLMPEPEQNEMAVDKSTSTTGATPPRPAVRSFCKT 129
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG +WRF+HIFRGQPRRH
Sbjct: 130 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRH 189
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LL +GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++PSSVISS SMHLGVL
Sbjct: 190 LLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVL 249
Query: 247 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
ATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+R
Sbjct: 250 ATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 309
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 363
F+GT+VG E+ W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+
Sbjct: 310 FTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLP 365
Query: 364 LAKNKRPRLSMEVPPL 379
L++ KRPR + VPP+
Sbjct: 366 LSRVKRPRPN--VPPV 379
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 15/191 (7%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAA---------DSDG 544
K G+ ++FG ++ T+SAPS + + ++ T ++A+ D
Sbjct: 588 KAREGSGFKIFGFKV---DTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIP 644
Query: 545 KSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTLVGY 602
+ ++ + ++ +Q +P S+ QS S RS TKV QGVA+GR++DL+ Y
Sbjct: 645 ELSVSTAGTTENEKSIQQAPNSSKDVQSKSHGASTRSCTKVHKQGVALGRSVDLSKFGDY 704
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
D L EL+ MF+ G+L + + W+IVYTD EGDMMLVGDDPW EFC++V++IFI + ++
Sbjct: 705 DELTAELDRMFEFDGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKEE 764
Query: 662 VKKMSPGSKLP 672
V+KM+ S P
Sbjct: 765 VQKMNSKSSTP 775
>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
Length = 782
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/477 (53%), Positives = 335/477 (70%), Gaps = 31/477 (6%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK 71
S+ D LY ELW ACAGPLV VP++G++V+YFPQGH+EQ+EASTNQ +Q++P+++LPSK
Sbjct: 49 SNEEDFLYNELWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTNQVSDQQMPIYKLPSK 108
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVL 127
ILC V+NI L AE +TDEV+AQ+TL+PE +Q+E TP P + RP VHSF K L
Sbjct: 109 ILCTVINIDLKAEPDTDEVFAQMTLVPESTQDEKDIIIETPPPLQS---RPHVHSFCKTL 165
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSVLR+HA ECLPPLDM + P+QELVAKDLHG EW F+HIFRGQPRRHL
Sbjct: 166 TASDTSTHGGFSVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPRRHL 225
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
L +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQS++PSSVISS SMHLGVLA
Sbjct: 226 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLA 285
Query: 248 TASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
TASHA+ T TMF VYYKPRT S+FI+ +Y+E++ +++GMR+KMRFEGE++PE+RF
Sbjct: 286 TASHAIQTGTMFTVYYKPRTSPSEFIVPFAQYVESIKKNYSIGMRFKMRFEGEEAPEQRF 345
Query: 306 SGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 363
+GT++G+ D S W +SKWR LKV+WDE S+ RPD++SPW+IEP +A P + P+
Sbjct: 346 TGTIIGIGDVDSTRWPESKWRCLKVRWDEQTSVPRPDKISPWQIEPALA---PIALNPLP 402
Query: 364 LAKNKRPRLSM-----------EVPP-LDLPSAASAPWSARLAQSHNLTQL----SVTAE 407
+++ KRPR ++ VPP + + +AA +R+ Q +T L + +E
Sbjct: 403 VSRTKRPRPNILPTSPDVSALTRVPPKVAVDAAAQDHGFSRVLQGQEITTLRGAFAECSE 462
Query: 408 DKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 464
+ V H H +++ + + S+ W+ R + S DD S
Sbjct: 463 SENAQKPVGQSHLHDKERVDASSLRKMASEC-WMPLVRPEHSCSGLHGPTDDAYGFS 518
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 40/205 (19%)
Query: 473 STPHPSKPNNDTL-----LEQVETGR------------KTETGTSCRLFGIELIN----H 511
STP P +P N + L++ +GR K++ +C+LFGI L + H
Sbjct: 584 STPVPQQPTNWLISSTPSLKESASGRVHTDHYAQPEPVKSKGSGNCKLFGISLKSSSQQH 643
Query: 512 ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE-----------KKQEQV 560
TSS+ ++ + E A +SD S+ K K K + V
Sbjct: 644 ETSSSHAK------VADEAAQTFCKPQALESDRLSEPLKCAKSLDTLCSDSDEVKTNQPV 697
Query: 561 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 620
Q +++ +K C +S RS TKVQ QG A+GR++DL Y+ LI EL+ MF+ +G+L
Sbjct: 698 QQHSRDAHNKPLC-SSTRSCTKVQKQGSALGRSVDLAKFTSYEELITELDHMFEFQGELM 756
Query: 621 TRTK-WEIVYTDDEGDMMLVGDDPW 644
K W +VYTD+EGDMMLVGDDPW
Sbjct: 757 NSNKNWLVVYTDNEGDMMLVGDDPW 781
>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
Length = 839
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/361 (65%), Positives = 293/361 (81%), Gaps = 6/361 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EAST+Q +Q++P++ LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+HL AE +TDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHG
Sbjct: 101 NVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
T+F VYYKPRTS +FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G ED
Sbjct: 281 TLFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCED 340
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
P WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR +
Sbjct: 341 ADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPRSN 398
Query: 374 M 374
M
Sbjct: 399 M 399
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 124/205 (60%), Gaps = 17/205 (8%)
Query: 472 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS---SLTT 528
HS+ SKP +L Q + K + G +C+LFGI L+ + P+ PV ++
Sbjct: 612 HSSELMSKP----MLFQNQDILKPKDG-NCKLFGISLVKN-----PAIPDPVGLNRNMMN 661
Query: 529 EGHIISTISA---AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 585
E ++ +++S KS++ + K K + + K Q+ +S TS RS TKV
Sbjct: 662 EADVMHPNVHQIHSSESGLKSELPRVLKLDKSVAISEADKLQQTCKSQGTSARSCTKVHK 721
Query: 586 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 644
QG+A+GR++DL+ YD L+ EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW
Sbjct: 722 QGIALGRSVDLSRFNNYDELVAELDQLFEFGGELQAPKKNWLIVYTDDEGDMMLVGDDPW 781
Query: 645 HEFCNMVKRIFICSSQDVKKMSPGS 669
EFC MV++IFI + ++V+KM+PGS
Sbjct: 782 REFCGMVRKIFIYTREEVQKMNPGS 806
>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
Length = 718
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/361 (65%), Positives = 293/361 (81%), Gaps = 6/361 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EAST+Q +Q++P++ LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+HL AE +TDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHG
Sbjct: 101 NVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
T+F VYYKPRTS +FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G ED
Sbjct: 281 TLFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCED 340
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
P WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR +
Sbjct: 341 ADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPRSN 398
Query: 374 M 374
M
Sbjct: 399 M 399
>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/358 (66%), Positives = 292/358 (81%), Gaps = 6/358 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+RELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ +Q +P++ LP KILCRV+
Sbjct: 36 LFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVI 95
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 96 NVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 155
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRFKHIFRGQPRRHLL +GWS FV
Sbjct: 156 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFV 215
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 216 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 275
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
T+F VYYKPRTS +FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 276 TIFTVYYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 335
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P W+DSKWR LKV+WDE ++ RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 336 SDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEP--ALAPPALNPLSMPRPKRPR 391
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 13/181 (7%)
Query: 501 CRLFGIELINHATSSAPS-EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK------ 553
C+LFG LI+ T PS + VS + H+ + +++D K D +K +
Sbjct: 626 CKLFGFSLISGPTLPEPSLSQRNVSEAADQMHLTAHQQRTSENDEKLDHSKGSRPVDDIV 685
Query: 554 ----EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
++ Q+ K+ Q+K S RS TKV +G+A+GR++DLT GYD L+ EL
Sbjct: 686 VDDQDRPLRTSQLHTKDVQAK-PLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAEL 744
Query: 610 EEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
+++F+ G+L T+ W IV+TD+EGDMMLVGDDPW EFC MV++I+I ++++KMSPG
Sbjct: 745 DQLFEFGGELLSTKKDWLIVFTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPG 804
Query: 669 S 669
+
Sbjct: 805 T 805
>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 851
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/359 (65%), Positives = 290/359 (80%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ Q +P++ LP KILCRV+
Sbjct: 48 LYRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVI 107
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 108 NVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHG 167
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 168 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 227
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 228 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 287
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 288 TMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIED 347
Query: 315 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 371
+ W SKWRSLKV+WDE ++I RP+RVS W+IEP +A P + P+ + + KRPR
Sbjct: 348 ADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALA---PLALNPLPMPRPKRPR 403
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 19/208 (9%)
Query: 480 PNNDTLLEQVETGRKTETG----TSCRLFGIELINH---ATSSAPSEKVPVSSLTTEGHI 532
P + LL + +G+ E + C+LFGI L++ A+ + S++ S H
Sbjct: 613 PRSRELLSKPISGKPCEVSKLKDSDCKLFGISLLSSRPIASEPSLSQRNVTSESVGHMHT 672
Query: 533 ISTISAAADSDGKSDIAKEFK----------EKKQEQVQVSPKESQSKQSCLTSNRSRTK 582
S A ++D KS+ ++ K EK + Q K+ Q+K S S RS TK
Sbjct: 673 ASHHQRAIENDQKSEHSRGSKPADGLLIDDHEKVLQTSQPHLKDVQAK-SHSGSARSCTK 731
Query: 583 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 641
V +G+A+GR++DLT Y LI EL+++F+ G+L + K W IVYTD+EGDMMLVGD
Sbjct: 732 VHKKGIALGRSVDLTKFSDYGELITELDQLFEFGGELTSPQKDWLIVYTDNEGDMMLVGD 791
Query: 642 DPWHEFCNMVKRIFICSSQDVKKMSPGS 669
DPW EF MV++I+I ++++KMSPG+
Sbjct: 792 DPWQEFVAMVRKIYIYPKEEIQKMSPGT 819
>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/358 (66%), Positives = 291/358 (81%), Gaps = 6/358 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+RELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ +Q +P++ LP KILCRV+
Sbjct: 36 LFRELWHACAGPLVTVPREKERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVI 95
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 96 NVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 155
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRFKHIFRGQPRRHLL +GWS FV
Sbjct: 156 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFV 215
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 216 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 275
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
T+F VYYKPRTS +FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GTVVG+ED
Sbjct: 276 TIFTVYYKPRTSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTVVGIED 335
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P W+DSKWR LKV+WDE ++ RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 336 SDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEP--ALAPPALNPLSMPRPKRPR 391
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 106/180 (58%), Gaps = 11/180 (6%)
Query: 501 CRLFGIELINHATSSAPS-EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 559
C+LFG LI+ PS + VS + H+ + +++D KSD +K +
Sbjct: 626 CKLFGFSLISGPIVPEPSLSQRNVSEPAGQMHLTAHQQRTSENDEKSDHSKGSRPVDDLV 685
Query: 560 VQVSPKESQSKQS---------CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 610
V + Q+ QS S RS TKV +G+A+GR++DLT GYD L+ EL+
Sbjct: 686 VDDHDRPLQTSQSHTKDVQAKPLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAELD 745
Query: 611 EMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
++F+ G+L T+ W IVYTD+EGDMMLVGDDPW EFC MV +I+I ++++KMSPG+
Sbjct: 746 QLFEFGGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVCKIYIYPKEEIQKMSPGT 805
>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
Length = 882
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/401 (60%), Positives = 296/401 (73%), Gaps = 8/401 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D L+ ELW ACAGPLV VPK G +V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC
Sbjct: 65 DALFSELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLYNLPWKILCE 124
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP----DPCPADSP-RPKVHSFSKVLTAS 130
V+N+ L AE +TDEVYAQ+TLLPE Q E P+ +P RP+VHSF K LTAS
Sbjct: 125 VMNVELKAESDTDEVYAQLTLLPESKQQEENASTEEVSAAPSAAPVRPRVHSFCKTLTAS 184
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSVLR+HA ECLPPLDM++ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +
Sbjct: 185 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQS 244
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA
Sbjct: 245 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAW 304
Query: 251 HAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HAV T TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT
Sbjct: 305 HAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGT 364
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP V+ N + K
Sbjct: 365 IVGMGDSDPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVPRTKR 424
Query: 368 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAED 408
RP + + AP A Q H L + T E+
Sbjct: 425 PRPNVIASTTDSSTQAKEVAPKVAAETQQHALQRAFQTQEN 465
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 107/188 (56%), Gaps = 19/188 (10%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA------AADSDGKSDIAKE 551
G SC+LFGI L + A S P + P S+ +G + SA A + + D +K
Sbjct: 662 GASCKLFGIHLDSPAKSE-PLKSPP--SVAYDGMPHTPGSAELCRMDATEPEKCYDPSKT 718
Query: 552 FKEKKQEQVQVSPKE---------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
K P++ + S +S S RS KV QG+A+GR++DLT GY
Sbjct: 719 PKPLDAPYADSVPEKHLSCQQASRNASGKSRGGSARSCKKVHKQGIALGRSVDLTKFNGY 778
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
L+ EL++MFD G L + K W +VYTD EGDMMLVGDDPW EFCN+V +IFI + ++
Sbjct: 779 MELVSELDDMFDFNGDLKSSNKEWMVVYTDHEGDMMLVGDDPWSEFCNIVHKIFIYTREE 838
Query: 662 VKKMSPGS 669
V++M+PG+
Sbjct: 839 VQRMAPGA 846
>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 282/612 (46%), Positives = 369/612 (60%), Gaps = 93/612 (15%)
Query: 75 RVVNIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLT 128
RV+ I L E+ +DE YA+ITL+P P+QNE + RP V+SF+KVLT
Sbjct: 39 RVIAIQLKVERNSDETYAEITLMPNTTQVVIPTQNE---------NQFRPLVNSFTKVLT 89
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTS HGGFSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLL
Sbjct: 90 ASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLL 149
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGW+ F+TSK+LVAGD VFLRGE GEL V +R QQ ++PSS+IS +SM GV+A+
Sbjct: 150 TTGWNAFITSKKLVAGDVIVFLRGETGELRVSIRRARYQQGNIPSSLISIESMRHGVIAS 209
Query: 249 ASHAVATQTMFVVYYKP----------RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
A HA Q MF+V YKP R+SQFI++ +K+L+AVNNKF VG R+ MRFE E
Sbjct: 210 AKHAFDNQCMFIVVYKPRFIFCVCISIRSSQFIVNYDKFLDAVNNKFNVGSRFTMRFEEE 269
Query: 299 DSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
+ ERR+ GT++GV DFSPHWK S+WRSLKVQWDE AS RPD+VSPWEI+ ++ + N
Sbjct: 270 NFSERRYFGTIIGVSDFSPHWKCSEWRSLKVQWDEFASFPRPDKVSPWEIKH--STPSSN 327
Query: 359 LVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH 418
++ + KNKR R E+ S++S L Q + Q S+T+ ++ +++
Sbjct: 328 VLPSSMLKNKRSREFNEI-----GSSSSHLLPPILTQGQEIGQPSMTSP---MNVPLSYR 379
Query: 419 HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 478
D S+ S + T PR+ +
Sbjct: 380 DAIEDDSTPSRLLMSYSVQ----TMPRLNY------------------------------ 405
Query: 479 KPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA 538
NND ++ +E G SCR+FG+ L ++ P K P+ +
Sbjct: 406 --NNDQIVTPIEGNITNNGGASCRVFGVSL-----ATPPVIKDPIEQI------------ 446
Query: 539 AADSDGKSDIAKEFKEKKQEQVQV-SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 597
DSD +I+K +EK Q+ S +E QSKQ L+S R+ TKVQM GV +GRALDL+
Sbjct: 447 --DSDPNLEISKLSQEKIFGLGQMRSTREIQSKQ--LSSTRTCTKVQMHGVTLGRALDLS 502
Query: 598 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
L GYD LI ELE++FD+KGQL R +WEIV+TD+E D MLVGDDPW EFCNMVK+I I
Sbjct: 503 VLNGYDQLILELEKLFDLKGQLQNRNQWEIVFTDNEEDEMLVGDDPWPEFCNMVKKIIIY 562
Query: 658 SSQDVKKMSPGS 669
S ++VK G+
Sbjct: 563 SKEEVKNFKSGN 574
>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
Length = 672
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/359 (67%), Positives = 292/359 (81%), Gaps = 4/359 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LYRELW ACAGPLV +P+ G+RVYYFPQGHMEQLEAS +Q L ++P F LPSKILC+
Sbjct: 17 DPLYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSKILCK 76
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ AE +TDEVYAQITL+PE Q+E +PD + R VHSF K LTASDTSTH
Sbjct: 77 VASVQRKAEPDTDEVYAQITLVPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTH 136
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA +CLPPLDM Q P QEL+A DLHG EW F+HI RGQPRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRHLLTTGWSVF 196
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SK+LVAGD +FLRG NG+L VGVR L RQQ++MPSSVISS S+ LGVLATAS+A++T
Sbjct: 197 VSSKKLVAGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILGVLATASYALST 256
Query: 256 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
++MF ++YKPRTS +FI+S+NKYLEA ++K +VGMR+KMRFEGE+ PERRFSGT+VGVE
Sbjct: 257 RSMFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVE 316
Query: 314 -DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
D S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP VA++ ++ QP +NKR R
Sbjct: 317 ADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPA-QRNKRAR 374
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 17/189 (8%)
Query: 493 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI-SAAADSDGKSDIAKE 551
RK TG CRLFGI+LI++ E P+++++ G + S A+SD +SD A
Sbjct: 462 RKQGTGNGCRLFGIQLIDNINME---ENSPLATISGTGVNDQPLHSLDANSDQQSDPANL 518
Query: 552 FKEK------KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 605
+ + E+ SP+ESQSKQ RS TKV MQG+AVGRA+DLT Y+ L
Sbjct: 519 NQSDLPSISCEPEKCLRSPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDCYEDL 573
Query: 606 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 664
+ +LE MFDIKGQL TK W++VYTDDE DMM+VGDDPW+EFC+MV++I I +S++V+K
Sbjct: 574 LKKLEYMFDIKGQLCGSTKNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKI-IYTSEEVRK 632
Query: 665 MSPGSKLPM 673
+SP K P+
Sbjct: 633 LSPKIKAPV 641
>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
Length = 821
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/362 (65%), Positives = 292/362 (80%), Gaps = 8/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++G+ V+YFPQGH+EQ+EASTNQ Q +P++ L KILCRV+
Sbjct: 44 LYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVI 103
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 104 NVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHG 163
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 164 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 223
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 224 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTG 283
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 284 TMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIED 343
Query: 315 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
S W SKWR LKV+WDE ++I RP+RVSPW+IEP +A P + P+ + + KRPR
Sbjct: 344 SDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA---PPALNPLPMPRPKRPRA 400
Query: 373 SM 374
++
Sbjct: 401 NV 402
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 15/216 (6%)
Query: 467 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 526
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 577 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 635
Query: 527 TTEGHI-ISTISAAADSDGKSDIAKEFK--------EKKQEQVQVSP---KESQSKQSCL 574
T H+ IS+ ++D KS+ +K K ++ ++Q+Q S K+ Q K
Sbjct: 636 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 694
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 695 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 754
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
GDMMLVGDDPW EFC+MV++I+I ++++KMSPG+
Sbjct: 755 GDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 790
>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
Length = 715
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 290/361 (80%), Gaps = 6/361 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++G+ V+YFPQGH+EQ+EASTNQ Q +P++ L KILCRV+
Sbjct: 44 LYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVI 103
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 104 NVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHG 163
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 164 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 223
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 224 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTG 283
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 284 TMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIED 343
Query: 315 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
S W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR +
Sbjct: 344 SDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPALNPLPMPRPKRPRAN 401
Query: 374 M 374
+
Sbjct: 402 V 402
>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
Length = 767
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/620 (44%), Positives = 373/620 (60%), Gaps = 82/620 (13%)
Query: 51 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP 110
+EAST +ELN+ P+ PSK+ CRV+ I L E +DE YA+ITL+P+ +Q T +
Sbjct: 113 VEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQN- 171
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
+ RP V+SF+KVLTASDTS HGGFSV +KHA ECLPPLDM+Q PTQE++A DLHG
Sbjct: 172 --QNQFRPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHG 229
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
+WRF+HI+RG +RHLLT GW+ F TSK+LV GD VF+RGE GEL VG+R QQ +
Sbjct: 230 NQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGN 289
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMR 290
+PSS++S +SM G++A+A HA Q MF+V YKPR+SQFI+S +K+L+ VNNKF VG R
Sbjct: 290 IPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDVVNNKFNVGSR 349
Query: 291 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
+ MRFEG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE AS RP++VSPW+IE
Sbjct: 350 FTMRFEGDDFSERRSFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEH 409
Query: 351 FVASATP--NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAED 408
TP N+ + KNKR R E+ S++S L Q + Q S+
Sbjct: 410 L----TPWSNVSRSSFLKNKRSREVNEI-----GSSSSHLLPPTLTQGQEIGQQSM---- 456
Query: 409 KRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA 468
++ N R + + ++A+ ++ + ++P
Sbjct: 457 ----------------ATPMNISLRYRD---------------ITEDAMTPSRLLMSYPV 485
Query: 469 HSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTT 528
+K N + ++ +E T S RLFG+ L + P E++ +
Sbjct: 486 QPM------AKLNYNNVVTPIEENITTNAVASFRLFGVSLATPSVIKDPVEQIGL----- 534
Query: 529 EGHIISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQ 586
+I++ +EKK Q Q+ SP E QSKQ +S R+ TKVQMQ
Sbjct: 535 ------------------EISRLTQEKKFGQSQILRSPTEIQSKQ--FSSTRTCTKVQMQ 574
Query: 587 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHE 646
GV +GRA+DL+ L GYD LI ELE++FD+KGQL R +WEI +T++E D MLVG+DPW E
Sbjct: 575 GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQWEIAFTNNEEDKMLVGEDPWPE 634
Query: 647 FCNMVKRIFICSSQDVKKMS 666
FCNM + S D K++
Sbjct: 635 FCNMRGYVASNSKDDPAKVA 654
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHME 49
+Y +LWK CAGPL D+PK G++VYYFPQGH+E
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIE 55
>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
Length = 766
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 290/361 (80%), Gaps = 6/361 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++G+ V+YFPQGH+EQ+EASTNQ Q +P++ L KILCRV+
Sbjct: 44 LYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVI 103
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 104 NVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHG 163
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 164 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 223
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 224 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTG 283
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 284 TMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIED 343
Query: 315 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
S W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR +
Sbjct: 344 SDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPALNPLPMPRPKRPRAN 401
Query: 374 M 374
+
Sbjct: 402 V 402
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 15/192 (7%)
Query: 467 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 526
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 577 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 635
Query: 527 TTEGHI-ISTISAAADSDGKSDIAKEFK-----------EKKQEQVQVSPKESQSKQSCL 574
T H+ IS+ ++D KS+ +K K EK+ + Q K+ Q K
Sbjct: 636 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 694
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 695 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 754
Query: 634 GDMMLVGDDPWH 645
GDMMLVGDDPW
Sbjct: 755 GDMMLVGDDPWQ 766
>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/336 (68%), Positives = 281/336 (83%), Gaps = 4/336 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++G RV+YFPQGH+EQ+EASTNQ +Q++PL+ L KILCRVV
Sbjct: 52 LYNELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLYNLLPKILCRVV 111
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT-TPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPE +Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 112 NVQLKAEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 171
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 172 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 231
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T
Sbjct: 232 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 291
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
T+F VYYKPRTS +FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 292 TLFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 351
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P WK+SKWR LKV+WDE +++ RP+RVSPW+IE
Sbjct: 352 ADPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIE 387
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 110/200 (55%), Gaps = 22/200 (11%)
Query: 484 TLLEQVETGRKTETGTSCRLFGIEL------INHATSSAPSEKVPVSSLTTEGHIISTIS 537
L+++ ++G+ E +C+LFGI L A + + P+S + H ++
Sbjct: 626 VLMQEHDSGKSLEG--NCKLFGIPLKISKPVAPEAAGTTITMNEPLSHIQPVSHQLTF-- 681
Query: 538 AAADSDGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 590
+SD KS+ +K K EK + + K++ K S RS TKV QG+A+
Sbjct: 682 ---ESDQKSEQSKGSKMTDENENEKPFQAGHLRTKDNHGKAQN-GSTRSCTKVHKQGIAL 737
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 649
GR++DL YD LI EL+ +F+ G+L K W IVYTDDE DMMLVGDDPW EF
Sbjct: 738 GRSVDLAKFNNYDELIAELDRLFEFNGELMAPQKNWLIVYTDDEDDMMLVGDDPWQEFVG 797
Query: 650 MVKRIFICSSQDVKKMSPGS 669
MV++I I + ++ +K+ PG+
Sbjct: 798 MVRKIVIYTKEEAQKIKPGA 817
>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
Length = 814
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/382 (62%), Positives = 296/382 (77%), Gaps = 12/382 (3%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q S D L+ ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LP
Sbjct: 11 QGPSAGDPLFNELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLYDLP 70
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE---PTTPDPCPADSPRPKVHSFSKV 126
SK+LC V+N+ L AE +TDEVYAQ+ L+PE QNE + +P V SF K
Sbjct: 71 SKLLCSVINVELKAEADTDEVYAQVMLIPENDQNEMAVEKSSSKAATTLAKPAVRSFCKT 130
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG +WRF+HIFRGQPRRH
Sbjct: 131 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRH 190
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LL +GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++PSSVISS SMHLGVL
Sbjct: 191 LLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVL 250
Query: 247 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
ATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N +++G+R++MRFEGE++PE+R
Sbjct: 251 ATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGVRFRMRFEGEEAPEQR 310
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 363
F+GT++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+
Sbjct: 311 FTGTIIGSENLDPLWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLP 366
Query: 364 LAKNKRPRLSMEVPPLDLPSAA 385
L++ KRPR + VPP S+A
Sbjct: 367 LSRVKRPRPN--VPPASPESSA 386
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 494 KTETGTSCRLFGIEL------INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 547
KT G+ ++FG ++ NH +S + P + A D +
Sbjct: 601 KTREGSGFKIFGFKVDTASAPTNHLSSPMAATHEPALQTQPSASLNQLQHAQTDCFPEVS 660
Query: 548 IAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 605
++ + ++ +Q +P+ S+ QS S RS TKV QGVA+GR++DL+ YD L
Sbjct: 661 VSTGGTNENEKSIQQAPQSSKDVQSKSHGASTRSCTKVHKQGVALGRSVDLSKFSDYDEL 720
Query: 606 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 664
EL++MF+ G+L + K W+IVYTD+E DMMLVGDDPW EFC++V++I I + ++V+K
Sbjct: 721 KAELDKMFEFDGELMSSNKNWQIVYTDNEDDMMLVGDDPWGEFCSIVRKICIYTKEEVQK 780
Query: 665 MS 666
M+
Sbjct: 781 MN 782
>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
Length = 888
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/359 (67%), Positives = 291/359 (81%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSKILCRV+
Sbjct: 86 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 145
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE ++DEVYAQITLLPE Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 146 NVDLKAEVDSDEVYAQITLLPEAIQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 205
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 206 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 265
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++ SSVISS SMHLGVLATA HA++T
Sbjct: 266 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVSSSVISSHSMHLGVLATAWHAISTG 325
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 326 TMFSVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 385
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 371
P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 386 SDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKLEPALA---PPALSPVPMPRPKRPR 441
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 487 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 546
E VE K+ G +CRLFGI L+N+ + + + T G T D +S
Sbjct: 669 EMVEDTAKSRDG-NCRLFGIPLVNNVNVTESTMSPRNNFNDTAGLTQMTSPKVQDLSDQS 727
Query: 547 DIAKEFKEKK------QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 600
+K +++ Q PK+ +K S+RS TKVQ QG+A+GR++DL+
Sbjct: 728 KGSKSTNDQREQGRPFQANHHPHPKDVHTKTH---SSRSCTKVQKQGIALGRSVDLSKFQ 784
Query: 601 GYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 659
Y+ LI EL+ MF+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++I I +
Sbjct: 785 NYEELIAELDRMFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCGMVRKISIYTK 844
Query: 660 QDVKKMSPGS 669
++V+KM+PG+
Sbjct: 845 EEVRKMNPGT 854
>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
Length = 836
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/344 (66%), Positives = 277/344 (80%), Gaps = 9/344 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D L+ ELW ACAGPLV VP+ G++V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC
Sbjct: 19 DALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCE 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTA 129
V+N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTA
Sbjct: 79 VMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTA 138
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 139 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQ 198
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
+GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA
Sbjct: 199 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATA 258
Query: 250 SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
HAV T TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+G
Sbjct: 259 WHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTG 318
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
T+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 319 TIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 362
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 498 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 617 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 676
Query: 555 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 606
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 677 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 736
Query: 607 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 737 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 796
Query: 666 SPGS 669
+PG+
Sbjct: 797 NPGT 800
>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 826
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/450 (56%), Positives = 313/450 (69%), Gaps = 30/450 (6%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q +S D LY ELW ACAGPLV VP+ G VYYFPQGH+EQ+EAS NQ ++ L+ LP
Sbjct: 14 QGTSTGDPLYDELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLYDLP 73
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT----------TPDPCPADSPRPK 119
SK+LCRV+N+ L AE +TDEVYAQ+ L+PEP Q+E T PA RP
Sbjct: 74 SKLLCRVLNVELKAEADTDEVYAQVMLMPEPEQSEAAATTTEKSSSATGGTMPA---RPA 130
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIF
Sbjct: 131 VRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIF 190
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLL +GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++ SSVISS
Sbjct: 191 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSH 250
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
SMHLGVLATA HA+ T+TMF VYYKPRT S+FII +KY E+V N +++G R+KMRFEG
Sbjct: 251 SMHLGVLATAWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEG 310
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
E++PE+RF+GT+VG ++ W +S WRSLKV+WDE ++I RPDRVSPWEIEP AS+ P
Sbjct: 311 EEAPEQRFTGTIVGSDNLDQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP--ASSPP 368
Query: 358 NLVQPV-LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVA 416
V P+ L++ KR R + VPP AS S R + + + +N V
Sbjct: 369 --VNPLPLSRAKRSRPN--VPP------ASPESSVRTKEGATKADMDCAQAQRNQNNTVL 418
Query: 417 WHH--KHSDFSSNSNFMSRTQSDGEWLTSP 444
H + + + ++F + Q W T P
Sbjct: 419 PGHEQRSNKLTDINDFDATVQKPMVWSTPP 448
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 108/189 (57%), Gaps = 26/189 (13%)
Query: 494 KTETGTSCRLFGIEL------INHATSSAPSEKVPV---------SSLTTEGHIISTISA 538
KT G+ ++FG ++ NH S + PV L T+ ++S
Sbjct: 607 KTTEGSDFKIFGFKVDTASAGFNHLNSPMAATHEPVLQTQPSVSLDHLQTDCSPEVSLSI 666
Query: 539 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 598
A +D EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 667 AGTTD---------NEKNIQQCPQSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSK 716
Query: 599 LVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
V YD L EL++MFD G+L + K W+IVYTD+EGDMMLVGDDPW EFC+MV++I I
Sbjct: 717 FVDYDELTAELDKMFDFDGELMSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSMVRKICIY 776
Query: 658 SSQDVKKMS 666
+ ++V+KM+
Sbjct: 777 TKEEVQKMN 785
>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
Length = 853
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/342 (66%), Positives = 276/342 (80%), Gaps = 9/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+ ELW ACAGPLV VP+ G++V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+
Sbjct: 38 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASD 131
N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASD
Sbjct: 98 NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277
Query: 252 AVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AV T TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+
Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 337
Query: 310 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 379
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 498 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 634 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 693
Query: 555 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 606
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 694 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 753
Query: 607 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 754 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
Query: 666 SPGS 669
+PG+
Sbjct: 814 NPGT 817
>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
Length = 852
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/342 (66%), Positives = 276/342 (80%), Gaps = 9/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+ ELW ACAGPLV VP+ G++V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+
Sbjct: 37 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASD 131
N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASD
Sbjct: 97 NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 276
Query: 252 AVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AV T TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 336
Query: 310 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 337 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 378
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 498 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 633 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 692
Query: 555 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 606
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 693 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 752
Query: 607 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 753 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 812
Query: 666 SPGS 669
+PG+
Sbjct: 813 NPGT 816
>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
Length = 853
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/342 (66%), Positives = 276/342 (80%), Gaps = 9/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+ ELW ACAGPLV VP+ G++V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+
Sbjct: 38 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASD 131
N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASD
Sbjct: 98 NVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277
Query: 252 AVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AV T TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+
Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTI 337
Query: 310 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 379
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 498 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 634 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 693
Query: 555 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 606
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 694 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 753
Query: 607 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 754 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
Query: 666 SPGS 669
+PG+
Sbjct: 814 NPGT 817
>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
Length = 813
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/375 (62%), Positives = 286/375 (76%), Gaps = 11/375 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D+LY ELWKACAGPLV VP G+RV+YFPQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 18 DELYAELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPC 77
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------PDPCPADSPRPKVHSFSKVL 127
+V+N+ L AEQ+TDEVYAQ+TLLPE +T P PA RP+VHSF K L
Sbjct: 78 KVMNVELKAEQDTDEVYAQLTLLPEKQNEHASTEGEKEEVPAAVPAVHERPRVHSFCKTL 137
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSVLR+HA ECLPPLDM+Q+ PTQEL+ +DLHG EWRF+HIFRGQP+RHL
Sbjct: 138 TASDTSTHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKRHL 197
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
L +GWS FV++KRLVA D F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLA
Sbjct: 198 LQSGWSVFVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLA 257
Query: 248 TASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
TA HAV T +MF VYYKPRTS +F++ + Y E++ ++GMR+KMRFEGE++ E+RF
Sbjct: 258 TAWHAVNTGSMFTVYYKPRTSPAEFVVPCDLYYESMKRNHSIGMRFKMRFEGEEAAEQRF 317
Query: 306 SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+GT+VG+ D P W DSKWRSLKV+WDE +S+ RPDRVSPW+IEP V+ + N +Q
Sbjct: 318 TGTIVGIGDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVSPLSVNPLQAPR 377
Query: 365 AKNKRPRLSMEVPPL 379
K RP P L
Sbjct: 378 NKRSRPNAIASSPEL 392
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
Query: 498 GTSCRLFGIELINHATS----SAPS------EKVPVSSLTTEGHIISTISAAADSDGKSD 547
G+ C LFG L A S S PS + P S + +I + S S
Sbjct: 610 GSPCMLFGFPLDGPAKSEPMISPPSVAYDGMPETPCSEKQPQPEVIELDRSPGTSKLVSP 669
Query: 548 IAKEFKEKKQEQVQVSPKESQSKQSCL-TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 606
+ + + + Q P+ +++ QS L S RS KV QG+A+GR++DLT YD LI
Sbjct: 670 LDENQSDSAMAKHQTCPEATRNIQSKLQCSTRSCKKVHKQGIALGRSVDLTRFTCYDELI 729
Query: 607 DELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
EL+ MFD G+L + W +VYTD + DMMLVGDDPW+EFC++V +IFI + ++V KM
Sbjct: 730 AELDRMFDFGGELKGSCENWMVVYTDSDNDMMLVGDDPWNEFCDVVHKIFIYTREEVSKM 789
Query: 666 SPGS 669
+PG+
Sbjct: 790 NPGA 793
>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
Length = 840
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/362 (64%), Positives = 294/362 (81%), Gaps = 9/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY+ELW ACAGPLV VP+QG+RVYYFPQGH+EQ+EASTNQ +Q++P++ L SKILCRV+
Sbjct: 34 LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKILCRVI 93
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L A+ +TDEV+AQITLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 94 NVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHG 153
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM+Q PTQ+LVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 154 GFSVLRRHAEECLPELDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 213
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLR E EL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T
Sbjct: 214 SSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 272
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPR S +FI+ ++Y+E+V + +++GM ++MRFEGE++PE+R++GT+VG+ED
Sbjct: 273 TMFTVYYKPRISPAEFIVPFDQYMESVKSNYSIGMGFEMRFEGEEAPEQRYTGTIVGIED 332
Query: 315 FSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
P W DSKWR LKV+WDE +++ RP+RVSPW+IEP +A P + P+ L++ KRPR
Sbjct: 333 ADPQRWPDSKWRCLKVRWDETSTVPRPERVSPWKIEPALA---PLALNPLPLSRPKRPRS 389
Query: 373 SM 374
+M
Sbjct: 390 NM 391
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 17/202 (8%)
Query: 485 LLEQVETGRKTETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTE-GHIISTISAAAD 541
L+E+ + + E G + C+LFGI L++ + + + +S+ GH+ + +
Sbjct: 609 LMEKPISVQHHEAGKTKDCKLFGIPLVSSSCVTPEPILLHQNSMNEPVGHMNHQL-GVLE 667
Query: 542 SDGKSDIAKE-----------FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 590
SD KS+ +K + K + Q K+ SK S+RS TKV QG+A+
Sbjct: 668 SDPKSEQSKSPTLANDSNCVSEQGKPSQTCQPHVKDVHSKPQS-GSSRSCTKVHKQGIAL 726
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 649
GR++DL+ Y+ LI EL+ +F+ G+L T K W I+YTDDEGD+MLVGDDPW EFC
Sbjct: 727 GRSVDLSKFNNYEELIAELDRLFEFGGELMTPKKNWLIIYTDDEGDIMLVGDDPWKEFCG 786
Query: 650 MVKRIFICSSQDVKKMSPGSKL 671
MV++IFI + ++V+KM PGS L
Sbjct: 787 MVRKIFIYTREEVQKMKPGSSL 808
>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
Length = 839
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/398 (59%), Positives = 298/398 (74%), Gaps = 19/398 (4%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYYFPQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 25 DPLFVELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPC 84
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP------------CPADSPRPKVHS 122
+++NI L AE +TDEVYAQ+TLLP+ Q+E T+ P + P++HS
Sbjct: 85 KLMNIELKAEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPRIHS 144
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQ
Sbjct: 145 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQ 204
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SMH
Sbjct: 205 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMH 264
Query: 243 LGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
LGVLATA HAV T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 265 LGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 324
Query: 301 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
E+RF+GT+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP + +P+
Sbjct: 325 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAI---SPSP 381
Query: 360 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSH 397
V P+ + KR R S+ P D+P+ + S +A+S
Sbjct: 382 VNPLPVRFKRSRSSVNASPSDVPTVSREVASKVMAESQ 419
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 25/191 (13%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------DGKSDI 548
GTS +LFGI L +P + P+ S+ +G + ++ S + D SD
Sbjct: 618 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDIVGVDNCSDP 671
Query: 549 AKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTL 599
+K K + E Q P+ +Q+ Q+ + +S RS KV QG A+GR++DLT
Sbjct: 672 SKTVKPFDGPQSDSITENNQPCPEATQNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKF 731
Query: 600 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
YD LI EL++MFD G+L K W +VYTD+EGD+MLVGDDPW+EFC+MV +IFI +
Sbjct: 732 TCYDELIAELDQMFDFDGELKNPCKNWLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYT 791
Query: 659 SQDVKKMSPGS 669
++V++M+PG+
Sbjct: 792 REEVERMNPGA 802
>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 624
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 294/678 (43%), Positives = 393/678 (57%), Gaps = 105/678 (15%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
++L+ ELW+ACAGPLV++P+ +RV+YF QGH+EQL+ T+ L ++I +F++P+KILC
Sbjct: 10 EELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILC 69
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTS
Sbjct: 70 K-------AETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTS 122
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWS
Sbjct: 123 THGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWS 182
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
TFVTSK+L+AGD FV+LR L++ Q
Sbjct: 183 TFVTSKKLIAGDAFVYLR------------LSQSQ------------------------- 205
Query: 254 ATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+I+ LNKYLE+ F VGMR+KM FEG+D P ++FSGTVV
Sbjct: 206 ----------------YIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVDKG 249
Query: 314 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPR 371
D SP W+ S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KNKRPR
Sbjct: 250 DLSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKNKRPR 308
Query: 372 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 431
+ E + A W + + H T +S ++E K + VAW + + +S+ S+ +
Sbjct: 309 ETAEGLDIHALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAMSSSI 364
Query: 432 SRTQS-DGEWL-------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP-SKPN 481
+ + G W + P + + SQ+LFQ +D + + WP S + P SK +
Sbjct: 365 CQNSAVTGSWFKGFNSSGSHPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPSSKLS 423
Query: 482 NDTLLEQVET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTE 529
+T L +T K E G RLFG+ LINHA SSA ++K V + T
Sbjct: 424 CNTALCSYQTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGAGETS 482
Query: 530 GHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVA 589
+ DS S + K+ V SP+E QS QSC S RSR KVQM G
Sbjct: 483 ARAAGSFE---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQMHGND 533
Query: 590 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDPWHEF 647
V RA+DL L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG PW EF
Sbjct: 534 VCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVPWQEF 592
Query: 648 CNMVKRIFICSSQDVKKM 665
C MV++I I S D M
Sbjct: 593 CQMVRKIVIHSIGDRGHM 610
>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
Length = 830
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/418 (58%), Positives = 303/418 (72%), Gaps = 28/418 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLG
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLG 258
Query: 245 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
VLATA HAV T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E
Sbjct: 259 VLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAE 318
Query: 303 RRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V
Sbjct: 319 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVN 375
Query: 362 PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 408
P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 376 PLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 433
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 542
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 604 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 657
Query: 543 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 593
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 658 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 717
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 718 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 777
Query: 653 RIFICSSQDVKKMSPGS 669
+IFI + ++V++M+PG+
Sbjct: 778 KIFIYTREEVERMNPGA 794
>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
Length = 832
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/418 (58%), Positives = 303/418 (72%), Gaps = 28/418 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 21 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 80
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 81 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 140
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 141 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 200
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLG
Sbjct: 201 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLG 260
Query: 245 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
VLATA HAV T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E
Sbjct: 261 VLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAE 320
Query: 303 RRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V
Sbjct: 321 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVN 377
Query: 362 PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 408
P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 378 PLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 435
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 542
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 606 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 659
Query: 543 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 593
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 660 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 719
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 720 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 779
Query: 653 RIFICSSQDVKKMSPGS 669
+IFI + ++V++M+PG+
Sbjct: 780 KIFIYTREEVERMNPGA 796
>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 707
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/418 (58%), Positives = 303/418 (72%), Gaps = 28/418 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLG
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLG 258
Query: 245 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
VLATA HAV T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E
Sbjct: 259 VLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAE 318
Query: 303 RRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V
Sbjct: 319 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVN 375
Query: 362 PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 408
P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 376 PLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 433
>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
Length = 849
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/394 (59%), Positives = 293/394 (74%), Gaps = 13/394 (3%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + + LP KILC
Sbjct: 37 DGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCE 96
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASD 131
V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASD
Sbjct: 97 VMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWH 276
Query: 252 AVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AV T TMF VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT+
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTI 336
Query: 310 VG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 367
VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ + +
Sbjct: 337 VGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVHRP 393
Query: 368 KRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 399
KRPR + +P P+ +AP Q H L
Sbjct: 394 KRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 427
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 634 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 689
Query: 558 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 690 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 749
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 750 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 808
>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
Length = 335
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/318 (72%), Positives = 268/318 (84%), Gaps = 3/318 (0%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL 73
+SD LYRELW ACAGPLV +P+Q +RVYYFPQGHMEQLEAS +Q L Q++P F LPSKIL
Sbjct: 18 SSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKIL 77
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
C+VVN+ L AE +TDEVYAQITLLPE +QNE T+PDP + R VHSF K LTASDTS
Sbjct: 78 CKVVNVVLRAESDTDEVYAQITLLPESNQNEVTSPDPPLPEPTRCNVHSFCKTLTASDTS 137
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRRHLLTTGWS
Sbjct: 138 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWS 197
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SK+LVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA+
Sbjct: 198 VFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAI 257
Query: 254 ATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+T T+F V+YKPRTS+ F++SLNKYLEA N+K +VGMR+KMRFEGE+ PER FSGT+VG
Sbjct: 258 STGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVG 317
Query: 312 VED-FSPHWKDSKWRSLK 328
+ D SP W +S+WRSLK
Sbjct: 318 LGDNASPGWANSEWRSLK 335
>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
Length = 850
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/398 (59%), Positives = 294/398 (73%), Gaps = 20/398 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + + LP KILC
Sbjct: 37 DGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCE 96
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNE--------PTTPDPCPADSPRPKVHSFSKVL 127
V+N+ L AE + DEVYAQ+TLLPE Q E P +P PA RP+VHSF K L
Sbjct: 97 VMNVELKAEPDNDEVYAQLTLLPESKQPEENGSSEEMPASP---PAALARPRVHSFCKTL 153
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHL
Sbjct: 154 TASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 213
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
L +GWS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLA
Sbjct: 214 LQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLA 273
Query: 248 TASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
TA HAV T TMF VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF
Sbjct: 274 TAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRF 333
Query: 306 SGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 363
+GT+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+
Sbjct: 334 TGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLP 390
Query: 364 LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 399
+ + KRPR + +P P+ +AP Q H L
Sbjct: 391 VHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 428
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 635 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 690
Query: 558 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 691 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 750
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 751 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 809
>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 841
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/384 (62%), Positives = 288/384 (75%), Gaps = 23/384 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELW+ACAGPLV VP G+RV+Y PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 27 DGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPC 86
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQ------NEPTTPDPC-------PADSPRPKVH 121
+V+N+ L AE +TDEVYAQ+TLLPE Q N + D PA + RP+VH
Sbjct: 87 KVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVH 146
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EWRF+HIFRG
Sbjct: 147 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRG 206
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SM
Sbjct: 207 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSM 266
Query: 242 HLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
HLGVLATA HAV T TMF VYYKPRT S+F++ + Y E++ ++GMR+KM FEGE+
Sbjct: 267 HLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEE 326
Query: 300 SPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
+ E+RF+GT+VGV D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+
Sbjct: 327 AAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPS 383
Query: 359 LVQPVLA---KNKRPRLSMEVPPL 379
V P+ A K RP + P L
Sbjct: 384 PVNPLPAPRTKRARPNVLASSPDL 407
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 114/183 (62%), Gaps = 18/183 (9%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK---- 553
G+SC LFGI L + A P + S+ +G + A + D SD +K K
Sbjct: 630 GSSCMLFGISLDSPAK---PELLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDG 683
Query: 554 ---EKKQEQVQVSP---KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
+ +E+ Q P K QSKQ S+RS KV QG+A+GR++DLT YD LI
Sbjct: 684 AQHDSAREKHQSCPDGTKNIQSKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIA 742
Query: 608 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
EL++MFD G+L++ +K W +VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+
Sbjct: 743 ELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMN 802
Query: 667 PGS 669
PG+
Sbjct: 803 PGA 805
>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
Length = 817
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/402 (58%), Positives = 295/402 (73%), Gaps = 13/402 (3%)
Query: 8 LSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR 67
L+ D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + +
Sbjct: 62 LAGGGGTEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYD 121
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSF 123
LP KILC V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+VHSF
Sbjct: 122 LPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSF 181
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQP
Sbjct: 182 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQP 241
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLL +GWS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHL
Sbjct: 242 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHL 301
Query: 244 GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 301
GVLATA HAV T TMF VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++P
Sbjct: 302 GVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAP 361
Query: 302 ERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
E+RF+GT+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P +
Sbjct: 362 EQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPI 418
Query: 361 QPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 399
P+ + + KRPR + +P P+ +AP Q H L
Sbjct: 419 NPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 460
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 667 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 722
Query: 558 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 723 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 782
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 644
MFD G+L +K W +VYTD EGDMMLVGDDPW
Sbjct: 783 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 816
>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 840
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/383 (62%), Positives = 288/383 (75%), Gaps = 22/383 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELW+ACAGPLV VP G+RV+Y PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 27 DGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPC 86
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEP-----SQNEPTTPDPC-------PADSPRPKVHS 122
+V+N+ L AE +TDEVYAQ+TLLPE S N + D PA + RP+VHS
Sbjct: 87 KVMNVELKAEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHS 146
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EWRF+HIFRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQ 206
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMH
Sbjct: 207 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMH 266
Query: 243 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
LGVLATA HAV T TMF VYYKPRT S+F++ + Y E++ ++GMR+KM FEGE++
Sbjct: 267 LGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEA 326
Query: 301 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
E+RF+GT+VGV D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+
Sbjct: 327 AEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSP 383
Query: 360 VQPVLA---KNKRPRLSMEVPPL 379
V P+ A K RP + P L
Sbjct: 384 VNPLPAPRTKRARPNVLASSPDL 406
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 114/183 (62%), Gaps = 18/183 (9%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK---- 553
G+SC LFGI L + A P + S+ +G + A + D SD +K K
Sbjct: 629 GSSCMLFGISLDSPAK---PELLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDG 682
Query: 554 ---EKKQEQVQVSP---KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
+ +E+ Q P K QSKQ S+RS KV QG+A+GR++DLT YD LI
Sbjct: 683 AQHDSAREKHQSCPDGTKNIQSKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIA 741
Query: 608 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
EL++MFD G+L++ +K W +VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+
Sbjct: 742 ELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMN 801
Query: 667 PGS 669
PG+
Sbjct: 802 PGA 804
>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
Length = 751
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/394 (59%), Positives = 293/394 (74%), Gaps = 13/394 (3%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + + LP KILC
Sbjct: 37 DGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCE 96
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASD 131
V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASD
Sbjct: 97 VMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWH 276
Query: 252 AVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AV T TMF VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT+
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTI 336
Query: 310 VG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 367
VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ + +
Sbjct: 337 VGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVHRP 393
Query: 368 KRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 399
KRPR + +P P+ +AP Q H L
Sbjct: 394 KRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 427
>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
Length = 857
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/342 (65%), Positives = 274/342 (80%), Gaps = 9/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+ ELW ACAGPLV VP+ G++ +YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+
Sbjct: 37 LFTELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASD 131
N+ L AE +TDEVYAQ+TLLPE + E P A RP+VHSF K LTASD
Sbjct: 97 NVELKAEPDTDEVYAQLTLLPELKRQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 276
Query: 252 AVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AV T TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFE E++PE+RF+GT+
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFESEEAPEQRFTGTI 336
Query: 310 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 337 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 378
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 17/189 (8%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
G SC+LFGI L + A S V + T G + + SD +K K
Sbjct: 633 GASCKLFGIHLDSPAKSEPSKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 692
Query: 555 KKQEQVQVSPKE-------------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
Q P++ + S +S S RS KV QG+A+GR++DLT G
Sbjct: 693 LDTPQPDSVPEKPSSQQASSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNG 752
Query: 602 YDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
Y+ LI EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + +
Sbjct: 753 YEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTRE 812
Query: 661 DVKKMSPGS 669
+V++M+PG+
Sbjct: 813 EVQRMNPGT 821
>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 826
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/383 (60%), Positives = 289/383 (75%), Gaps = 20/383 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYYFPQGH+EQ+EASTN +Q PL+ LP KI C
Sbjct: 26 DALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPC 85
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVH 121
+++N+ L AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++H
Sbjct: 86 KLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRG 205
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SM
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 242 HLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
HLGVLATA HAV T +MF VYYKPRTS +F++S +Y E++ +++GMR++MRFEGE+
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEE 325
Query: 300 SPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
+ E+RF+GT+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +P+
Sbjct: 326 AAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---SPS 382
Query: 359 LVQPVLAKNKRPRLSMEVPPLDL 381
V P+ + KR R S+ P D+
Sbjct: 383 PVNPLPVRFKRSRSSVNASPSDV 405
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 618 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
gi|224028731|gb|ACN33441.1| unknown [Zea mays]
gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 813
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/383 (60%), Positives = 289/383 (75%), Gaps = 20/383 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYYFPQGH+EQ+EASTN +Q PL+ LP KI C
Sbjct: 26 DALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPC 85
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVH 121
+++N+ L AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++H
Sbjct: 86 KLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRG 205
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SM
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 242 HLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
HLGVLATA HAV T +MF VYYKPRTS +F++S +Y E++ +++GMR++MRFEGE+
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEE 325
Query: 300 SPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
+ E+RF+GT+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +P+
Sbjct: 326 AAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---SPS 382
Query: 359 LVQPVLAKNKRPRLSMEVPPLDL 381
V P+ + KR R S+ P D+
Sbjct: 383 PVNPLPVRFKRSRSSVNASPSDV 405
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 618 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
Length = 813
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/383 (60%), Positives = 289/383 (75%), Gaps = 20/383 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYYFPQGH+EQ+EASTN +Q PL+ LP KI C
Sbjct: 26 DALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPC 85
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVH 121
+++N+ L AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++H
Sbjct: 86 KLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVA+DLHG EWRF+HIFRG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRG 205
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SM
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 242 HLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
HLGVLATA HAV T +MF VYYKPRTS +F++S +Y E++ +++GMR++MRFEGE+
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEE 325
Query: 300 SPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
+ E+RF+GT+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +P+
Sbjct: 326 AAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---SPS 382
Query: 359 LVQPVLAKNKRPRLSMEVPPLDL 381
V P+ + KR R S+ P D+
Sbjct: 383 PVNPLPVRFKRSRSSVNASPSDV 405
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 618 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
Length = 787
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/388 (60%), Positives = 291/388 (75%), Gaps = 8/388 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY+ELW ACAGPLV VP+QG+ V+YFPQGH+EQ+EASTNQ ++++P + LP KILCR
Sbjct: 17 DALYKELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQAADEQMPAYDLPGKILCR 76
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+ L AE +TDEV+AQITLLP+ Q+E RP+VHSF K LTASDTSTH
Sbjct: 77 VVNVQLKAEPDTDEVFAQITLLPQSEQDENLVEKKALPAPTRPRVHSFCKTLTASDTSTH 136
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA ECLPPLDM+ P QELVAKDL G EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 137 GGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRFRHIFRGQPRRHLLQSGWSLF 196
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++K+LVAGD F+FLRGE GEL VGVR RQ ++PSS +SS SMH+G+LATA HAV+T
Sbjct: 197 VSAKKLVAGDAFIFLRGETGELRVGVRRAMRQSCNVPSSFMSSHSMHIGILATAWHAVST 256
Query: 256 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
TMF VYYKPRTS +FII ++KY+E+V N F +GMR+KMRFE E++PE+RF GTV+GVE
Sbjct: 257 GTMFTVYYKPRTSPAEFIIPMDKYMESVKNNFTIGMRFKMRFEAEEAPEQRFLGTVIGVE 316
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
P W S+WR LKV+WDE +S+ RPDRVSPWE+EP +A P P + KR R
Sbjct: 317 HADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVEPALAPLDP---LPT-CRLKRSRS 372
Query: 373 SMEVPPLDLPSAASAP-WSARLAQSHNL 399
+M +P D + W +R Q+ ++
Sbjct: 373 NMPMPSADSSAVMKKDNWLSRDPQNQDI 400
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 23/194 (11%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII----STISAAADS--DGKSD 547
K++ +C+LFGI LI S VP+ + T + + + + A+D D SD
Sbjct: 584 KSKEDGNCKLFGISLI--------SSPVPMENATVDNNFMHRPQGLFNLASDKLQDFGSD 635
Query: 548 IA-KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSR-TKVQMQGVAVGRALDLTTL 599
++ ++ K+ K + +E S + L + +R KV QG+AVGR +DLT
Sbjct: 636 LSLQQLKKPKFFDSTIRCEEEKLFMASHFIEGKLQNGSTRCVKVHKQGIAVGRYVDLTKF 695
Query: 600 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
GY+ LI EL+ +F+ G+L T K W I +TDDEGDMMLVGDDPW EFC+MV+RIF+ +
Sbjct: 696 NGYNELIAELDRIFEFSGELITSNKNWLIAFTDDEGDMMLVGDDPWEEFCSMVRRIFVYT 755
Query: 659 SQDVKKMSPGSKLP 672
+++ +M+ S P
Sbjct: 756 REEINRMNQRSLNP 769
>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
Length = 362
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/341 (65%), Positives = 270/341 (79%), Gaps = 11/341 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILCRV 76
L+ ELWKACAGPL VP G+RV+YFPQGH+EQ+EASTNQ Q+ PL+ LP KI C+V
Sbjct: 22 LFVELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKV 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------PDPCPADSPRPKVHSFSKVLTA 129
+N+ L AEQ+TDEVYAQ+TLLPE Q+E + PD PA + R +VHSF K LTA
Sbjct: 82 MNVELKAEQDTDEVYAQLTLLPEKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKTLTA 141
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EW F+HIFRGQPRRHLL
Sbjct: 142 SDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRHLLQ 201
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
+GWS FV++KRLVAGD F+FLRGENGEL VGVR RQ++++PSSVISS SMHLGVLATA
Sbjct: 202 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHSMHLGVLATA 261
Query: 250 SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
H T TMF VYYKPRTS +F++ + + E++ ++GMR+KMRFEGE++ E+RF+G
Sbjct: 262 WHVANTGTMFTVYYKPRTSPAEFVVPRDWFDESLKRNHSIGMRFKMRFEGEEAAEQRFTG 321
Query: 308 TVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWE 347
T+VG+ D P W DSKWRSLKV+WDE +S+ RP+RVSPW+
Sbjct: 322 TIVGIGDSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362
>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
Length = 297
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/300 (76%), Positives = 254/300 (84%), Gaps = 11/300 (3%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-EL 59
MANR G + LY ELWK CAGPLVDVP+ +RVYYFPQGHMEQLEAST Q +L
Sbjct: 1 MANRGG---------EYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDL 51
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRP 118
N PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RP
Sbjct: 52 NTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRP 111
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR QQSSMPSSVISS
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
SMHLGVLATA HA T+TMF+VYYKPRTSQFIISLNKYLEA++NKF+VGMR+KMR GE
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRLWGE 291
>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/330 (64%), Positives = 262/330 (79%), Gaps = 5/330 (1%)
Query: 29 PLVDVPKQGQRVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSKILCRVVNIHLMAEQET 87
PLV VP+QG+ VYYFPQGH+EQ+EASTNQ + Q++P + L KILCRVVN+ L AE +T
Sbjct: 4 PLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLSPKILCRVVNVQLKAELDT 63
Query: 88 DEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHAT 146
DEV+AQ+ LLPE Q+ E + P RP+VHSF K+LTASDTSTHGGFSVL++HA
Sbjct: 64 DEVFAQVILLPETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLKRHAD 123
Query: 147 ECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDT 206
ECLPPLDM+ P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++K+LVAGD
Sbjct: 124 ECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDA 183
Query: 207 FVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR 266
F+FLRGE EL VGVR RQ S +PSS+ISS SMH+G+LATA HAV+T +MF VYYKPR
Sbjct: 184 FIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTVYYKPR 243
Query: 267 TS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSK 323
TS +FII ++KY+E+V +A+GMR+KMRFE +D+PE+RFSGTV+GVE+ P W S
Sbjct: 244 TSPAEFIIPVDKYMESVKINYAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKKWPRSN 303
Query: 324 WRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
WR LKV WDE + + RPDRVSPW++EP +A
Sbjct: 304 WRCLKVHWDETSPVHRPDRVSPWKVEPALA 333
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 14/208 (6%)
Query: 473 STPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI 532
S+PHPS+ L Q + +T + +LFG+ L ++ + P+ + S H
Sbjct: 497 SSPHPSRSKPKHLPFQ-QCNERTAKDDNYKLFGVSLFRNSKALEPA-TIHRHSADKPQHQ 554
Query: 533 ISTISAAADSDGKSDIAKEFKEKKQEQVQ----------VSPKESQSKQSCLTSNRSRTK 582
I+ S G ++ K K + + + K+ Q K ++ R K
Sbjct: 555 INVASDHLQLLGSDRYLEQLKHPKHARCEEQENIFQASSLYSKDVQGKPEGGSARRC-VK 613
Query: 583 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 641
V QG AVGR+LDL+ GY+ L EL+++F+ G+L K W IV+TDDE DMMLVGD
Sbjct: 614 VHKQGTAVGRSLDLSKFNGYNELTAELDQIFEFNGELVAPNKDWLIVFTDDEDDMMLVGD 673
Query: 642 DPWHEFCNMVKRIFICSSQDVKKMSPGS 669
DPW EFC+MV+RIFI + +++ +M P S
Sbjct: 674 DPWQEFCSMVRRIFIYTKEEINRMEPRS 701
>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
Length = 856
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/371 (60%), Positives = 276/371 (74%), Gaps = 14/371 (3%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q SS D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LP
Sbjct: 8 QGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLP 67
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSK 125
SK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP S
Sbjct: 68 SKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPGEGPSA 126
Query: 126 VLTASDTSTHGGFSVLRKHA--TECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
+ T S+ + LP DM QS PTQELVAKDLH +WRF+HIFRGQP
Sbjct: 127 RRSPRLTPARTAASLYSAATLMSASLPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQP 186
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHL
Sbjct: 187 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHL 246
Query: 244 GVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 301
GVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N ++VGMR++MRFEGE++P
Sbjct: 247 GVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAP 306
Query: 302 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
E+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V
Sbjct: 307 EQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VN 362
Query: 362 PV-LAKNKRPR 371
P+ L++ KRPR
Sbjct: 363 PLPLSRVKRPR 373
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 666 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 724
Query: 614 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 672
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 725 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 784
>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
Length = 844
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/381 (59%), Positives = 281/381 (73%), Gaps = 17/381 (4%)
Query: 1 MANRLGSLSQPSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ 57
M + G ++P S D LY ELW ACAGPLV VP++ + VYYFPQGH+EQ+EASTNQ
Sbjct: 32 MEGQKGHSTRPVSAKDAEKALYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEASTNQ 91
Query: 58 ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSP 116
+Q++P++ LPSKILCRV+N+ L AE +TDEV+AQ+TLLPEP Q+E DP P
Sbjct: 92 LADQQMPVYNLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPIQDENAVKKDPPQPPPP 151
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
R VHSF K LTASDTSTHGGFSVLR+HA ECLPPL ST + +
Sbjct: 152 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLVSINSTEFVRCLIDIIM------- 204
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
+ GQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVI
Sbjct: 205 -LIPGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 263
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR 294
SS SMHLGVLATA HA++T T+F VYYKPRTS +FI+ ++Y+E+V N + +GMR+KMR
Sbjct: 264 SSHSMHLGVLATAWHAISTGTLFTVYYKPRTSPAEFIVPFDRYMESVKNNYCIGMRFKMR 323
Query: 295 FEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
FEGE++PE+RF+GT+VG+ED S W++SKWRSLKV+WDE ++I RPDRVSPW +EP A
Sbjct: 324 FEGEEAPEQRFTGTIVGIEDADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVEP--A 381
Query: 354 SATPNLVQPVLAKNKRPRLSM 374
A P L + + KRPR +M
Sbjct: 382 LAPPALNPLPVPRPKRPRSNM 402
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 119/194 (61%), Gaps = 14/194 (7%)
Query: 486 LEQVETGRKTETGTSCRLFGIELINHATSSAP--SEKVPVSSLTTEGHIISTISAAADSD 543
L++ + G+ T+ +C+LFGI L ++ + P S + V+ TT H S A +SD
Sbjct: 621 LQEHDIGKSTDG--NCKLFGIPLFSNPVAPEPATSHRNMVNEPTT-AHPQSHQPRALESD 677
Query: 544 GKSD------IAKEFKEKKQEQV-QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 596
+S+ +A + + +KQ Q + ++ Q K S RS TKV QG+A+GR++DL
Sbjct: 678 QRSEQPRVSKMADDNEHEKQFQSGHLHTRDIQGKTQT-GSTRSCTKVHKQGIALGRSVDL 736
Query: 597 TTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIF 655
YD LI EL+ +F+ G+L + K W IVYTDDEGDMMLVGDDPW EF MV++IF
Sbjct: 737 AKFNNYDELIAELDRLFEFGGELISPKKNWLIVYTDDEGDMMLVGDDPWQEFVGMVRKIF 796
Query: 656 ICSSQDVKKMSPGS 669
I + ++V+KM+PG+
Sbjct: 797 IYTREEVQKMNPGT 810
>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
Aux/IAA_ARF_dimerisation [Medicago truncatula]
Length = 810
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 282/725 (38%), Positives = 402/725 (55%), Gaps = 80/725 (11%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + IP + L +ILCRVVN
Sbjct: 54 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASLSLFSSLEIPTYGLQPQILCRVVN 112
Query: 79 IHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPAD------SP-RPKVHSFSKVL 127
+ L+A +E DEVY Q+ LLP+ + P+ AD SP + H F K L
Sbjct: 113 VQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RGQPRRHL
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHL 232
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S+I +QS L+
Sbjct: 233 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLS 292
Query: 248 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+ ++A++ ++MF V+Y PR S F++ KY +++ N +G R+KM+FE ++SPERR
Sbjct: 293 SVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDESPERRC 352
Query: 306 -SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
SG V G+ D P+ W SKWR L V+WDE DRVSPWEI+P + N+
Sbjct: 353 SSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNIQSSR 412
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAPW-------SARLAQSHNLTQL--------SVTAED 408
K R L +E P + + S S+++ Q T +VT +
Sbjct: 413 RLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKTSFMSLYYGCDTVTKQK 472
Query: 409 KRIDNHVAWHHKHSDFSSN------SNFMSRTQSDG-----EWLTSPRVKFSQQLFQEAI 457
+ N + +H++ +SN S+ +R Q E PRV +Q+++
Sbjct: 473 EFDINSL----RHTNLASNGARKITSSEFTRIQPSSYADFTEMNRFPRVLQAQEIYPLRS 528
Query: 458 DDNK---NISAWP----AHSGHSTPHPSKPNNDTLLEQVETG--------RKTETGTSCR 502
K N+++W +++ ++ + +K N +L +V K G+S
Sbjct: 529 LTGKVDLNLNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSSFPYGDIHKVGQGSSML 588
Query: 503 L-----FGIELINHATSS----APSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKE 551
F + ++ T S A +V +SS + E + + ISAA D I+ +
Sbjct: 589 CSKPTNFQLGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQNDISAATSLDANIRISND 648
Query: 552 --FKEK----KQEQVQVSPKESQSKQSCLTS-NRSRTKVQMQGVAVGRALDLTTLVGYDH 604
FKE K +S + Q+ S RS TKV QG VGRA+DL+ L Y+
Sbjct: 649 ENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYND 708
Query: 605 LIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC+MV +I I + ++V+
Sbjct: 709 LVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDMVSKIHIYTQEEVE 768
Query: 664 KMSPG 668
KM+ G
Sbjct: 769 KMTIG 773
>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/364 (62%), Positives = 282/364 (77%), Gaps = 8/364 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSKILC 74
D LY+ELW ACAGPLV VP+QG+ VYYFPQGH+EQ+EASTNQ + Q++P + LP KILC
Sbjct: 2 DALYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLPPKILC 61
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
RVVN+ L AE +TDEV+AQ+ LLP Q+ + + P RP+VHSF K+LTASDTS
Sbjct: 62 RVVNVQLKAELDTDEVFAQVILLPVAEQDVDLVEKEDLPPPPARPRVHSFCKMLTASDTS 121
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM+ P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 122 THGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 181
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++K+LVAGD F+FLRGE EL VGVR Q S++PSSV+SS SMH+G+LAT HAV
Sbjct: 182 LFVSAKKLVAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHIGILATVWHAV 241
Query: 254 ATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+T +MF VYYKPRTS +FII ++KY E+V +A+GMR+KM+FE E++PE+RFSGTV+G
Sbjct: 242 STGSMFTVYYKPRTSPAEFIIPIDKYRESVKINYAIGMRFKMKFEAEEAPEQRFSGTVIG 301
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
VE+ P W SKWR LKV+WDE + + RPDRVSPW+IE +A P+L ++KR
Sbjct: 302 VEEADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIERALA---PSLDPVPGCQSKRH 358
Query: 371 RLSM 374
R +M
Sbjct: 359 RSNM 362
>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
Length = 570
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/360 (57%), Positives = 264/360 (73%), Gaps = 17/360 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
S +G FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RHLLTTG
Sbjct: 135 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 194
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A H
Sbjct: 195 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 254
Query: 252 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
A Q MF+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++G
Sbjct: 255 AFDNQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIG 314
Query: 312 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
V +FSPHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ + KNKR R
Sbjct: 315 VSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLKNKRLR 372
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 115/221 (52%), Gaps = 57/221 (25%)
Query: 453 FQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA 512
F++A++ ++ + ++P P P + N+ ++ Q+E T+ GT+ RLFG+ L
Sbjct: 377 FEDAMNPSRLLMSYPVQ-----PMPKRNYNNQMVTQIEENITTKAGTNFRLFGVSL---- 427
Query: 513 TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQEQVQVSPKESQSK 570
++ P K P+ + SDI+K E K+ Q Q SP + QSK
Sbjct: 428 -ATPPVIKDPIEQI------------------GSDISKLTEGKKFGQSQTLRSPTKIQSK 468
Query: 571 Q-----SC---------------------LTS-NRSRTKVQMQGVAVGRALDLTTLVGYD 603
Q +C LTS N +VQMQGV +GRA+DL+ L GYD
Sbjct: 469 QFSSTRTCTKVSIRSIYSYSLYMKLFLIILTSHNFDMEQVQMQGVTIGRAVDLSVLNGYD 528
Query: 604 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
LI ELE++FD+KGQL TR +W+I++T + D MLVGDDPW
Sbjct: 529 QLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPW 569
>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
Length = 822
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 282/737 (38%), Positives = 402/737 (54%), Gaps = 92/737 (12%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + IP + L +ILCRVVN
Sbjct: 54 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASLSLFSSLEIPTYGLQPQILCRVVN 112
Query: 79 IHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPAD------SP-RPKVHSFSKVL 127
+ L+A +E DEVY Q+ LLP+ + P+ AD SP + H F K L
Sbjct: 113 VQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG------ 181
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RG
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETEL 232
Query: 182 ------QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
QPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S+
Sbjct: 233 LCWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESI 292
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKM 293
I +QS L++ ++A++ ++MF V+Y PR S F++ KY +++ N +G R+KM
Sbjct: 293 IGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKM 352
Query: 294 RFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
+FE ++SPERR SG V G+ D P+ W SKWR L V+WDE DRVSPWEI+P
Sbjct: 353 KFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPS 412
Query: 352 VASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPW-------SARLAQSHNLTQL-- 402
+ N+ K R L +E P + + S S+++ Q T
Sbjct: 413 TSLPPLNIQSSRRLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKTSFMS 472
Query: 403 ------SVTAEDKRIDNHVAWHHKHSDFSSN------SNFMSRTQSDG-----EWLTSPR 445
+VT + + N + +H++ +SN S+ +R Q E PR
Sbjct: 473 LYYGCDTVTKQKEFDINSL----RHTNLASNGARKITSSEFTRIQPSSYADFTEMNRFPR 528
Query: 446 VKFSQQLFQEAIDDNK---NISAWP----AHSGHSTPHPSKPNNDTLLEQVETG------ 492
V +Q+++ K N+++W +++ ++ + +K N +L +V
Sbjct: 529 VLQAQEIYPLRSLTGKVDLNLNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSSFPYG 588
Query: 493 --RKTETGTSCRL-----FGIELINHATSS----APSEKVPVSS--LTTEGHIISTISAA 539
K G+S F + ++ T S A +V +SS + E + + ISAA
Sbjct: 589 DIHKVGQGSSMLCSKPTNFQLGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQNDISAA 648
Query: 540 ADSDGKSDIAKE--FKEK----KQEQVQVSPKESQSKQSCLTS-NRSRTKVQMQGVAVGR 592
D I+ + FKE K +S + Q+ S RS TKV QG VGR
Sbjct: 649 TSLDANIRISNDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGR 708
Query: 593 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMV 651
A+DL+ L Y+ L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC+MV
Sbjct: 709 AIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDMV 768
Query: 652 KRIFICSSQDVKKMSPG 668
+I I + ++V+KM+ G
Sbjct: 769 SKIHIYTQEEVEKMTIG 785
>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 620
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 276/669 (41%), Positives = 359/669 (53%), Gaps = 78/669 (11%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D+L ELW ACAGPL +P V Y+PQGH+EQ+ A+ + +++ LP+ +LCR
Sbjct: 2 DELNCELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAADVYQASKQ--FSNLPAHLLCR 59
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
+ I L A+ +TDEV+AQ+ L P+ ++ T P P + V SF K LTASDTSTH
Sbjct: 60 ISKIELQADPQTDEVFAQMDLTPQYELSKETKDAPSPIQ--QSNVRSFCKTLTASDTSTH 117
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A ECLP LD N P QELVAKDLHG +W F+HI+RG PRRHLLTTGWS F
Sbjct: 118 GGFSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGWSVF 177
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRLVAGDT +FLRGENG+L VGVR ++QQ S+ SS ++HLGVLA ASHA
Sbjct: 178 VSQKRLVAGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAASHAATE 237
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F V Y PRT S+F+I +KYL + +N VG R+KM+FE E+S ERR+SGT+V +
Sbjct: 238 RLRFSVIYNPRTSPSEFVIPYHKYLRSEDNNLTVGSRFKMKFETEESTERRYSGTIVEIS 297
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
D P W S WRS+KV+WDE AS R +RVSPWEIEP V +T L P + PR
Sbjct: 298 DVDPLKWPSSAWRSMKVEWDESAS-ERHERVSPWEIEPLVPIST--LPTPPVG----PRP 350
Query: 373 SMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 432
P D +S W++ + ++ D S N S
Sbjct: 351 KRRPPTFD----SSVSWASYMGTG---------------------AYQFRDPSCNKILPS 385
Query: 433 -RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL-----L 486
T S LTSP V QL P S ++ P +N + +
Sbjct: 386 WLTNSKSANLTSPPVPARSQL--------------PITSLNNDPKVLHAHNLSFELWETV 431
Query: 487 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 546
EQ + C+LFG L + + PVSS S DS+G
Sbjct: 432 EQEQLNASPALEQQCKLFGFNLADKVVPT------PVSSAP---------SLCEDSEGSG 476
Query: 547 D-IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 605
+ + +V + + Q + RS TKV G VGR +DL Y L
Sbjct: 477 PWSSSDHTSSTSADTRVGMIVTGTYQPLVAPVRSGTKVYYSG-KVGRTIDLKKCESYAAL 535
Query: 606 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 664
L +F ++GQL TK W++VYTD E D++LVGDDPW EFCN V+ + + S QD
Sbjct: 536 RRMLASLFGLEGQLDDVTKGWQLVYTDHENDVLLVGDDPWEEFCNCVRSLKVLSPQDAAG 595
Query: 665 MSPGSKLPM 673
S G K PM
Sbjct: 596 QSVG-KYPM 603
>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
Length = 733
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/316 (65%), Positives = 252/316 (79%), Gaps = 6/316 (1%)
Query: 63 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVH 121
+P++ L KILCRV+N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VH
Sbjct: 1 MPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVH 60
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRG
Sbjct: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRG 120
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SM
Sbjct: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 180
Query: 242 HLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
HLGVLATA HAV T TMF VYYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE+
Sbjct: 181 HLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEE 240
Query: 300 SPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 358
+PE+RF+GT+VG+ED S W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P
Sbjct: 241 APEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPA 298
Query: 359 LVQPVLAKNKRPRLSM 374
L + + KRPR ++
Sbjct: 299 LNPLPMPRPKRPRANV 314
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 15/216 (6%)
Query: 467 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 526
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 489 PPPTQYESPHSRELSQKQMSAKISEAAKPK-DSDCKLFGFSLLSSPTMLEPSLSQRNATS 547
Query: 527 TTEGHI-ISTISAAADSDGKSDIAKEFK--------EKKQEQVQVSP---KESQSKQSCL 574
T H+ IS+ ++D KS+ +K K ++ ++Q+Q S K+ Q K
Sbjct: 548 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 606
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 607 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 666
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
GDMMLVGDDPW EFC+MV++I+I ++++KMSPG+
Sbjct: 667 GDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 702
>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 514
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/274 (72%), Positives = 229/274 (83%), Gaps = 2/274 (0%)
Query: 104 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 163
EPT+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQEL
Sbjct: 18 EPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQEL 77
Query: 164 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 223
VA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR
Sbjct: 78 VARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRR 137
Query: 224 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNN 283
LA+QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N
Sbjct: 138 LAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKN 197
Query: 284 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 343
F++GMRY+MRFEGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++V
Sbjct: 198 GFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKV 257
Query: 344 SPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 376
SPWEIEPF SA TP Q +K+KR R E+
Sbjct: 258 SPWEIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 290
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 346 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 386
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 387 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 442
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 443 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 496
>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 771
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/295 (66%), Positives = 237/295 (80%), Gaps = 9/295 (3%)
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRP 118
L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E P A RP
Sbjct: 3 LYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRP 62
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HI
Sbjct: 63 RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHI 122
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS
Sbjct: 123 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISS 182
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFE 296
SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFE
Sbjct: 183 HSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFE 242
Query: 297 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
GE++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 243 GEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 297
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 498 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 554
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 552 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 611
Query: 555 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 606
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 612 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 671
Query: 607 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 672 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 731
Query: 666 SPGS 669
+PG+
Sbjct: 732 NPGT 735
>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
Length = 541
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/384 (52%), Positives = 266/384 (69%), Gaps = 11/384 (2%)
Query: 1 MANRLGSLSQPSSNSDD-----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAST 55
MAN +QP + LY +LWK CAGPL D+PK G+ VYYFPQG++EQL AS
Sbjct: 1 MANNQTMNAQPKFRGTEGVNRYLYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASA 60
Query: 56 NQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS 115
N L Q P+F + S+I C V++I L E TDEVYA+++LLP + E T P+ D+
Sbjct: 61 NDNLCQLKPIFDISSRIHCNVISIKLKVETNTDEVYAKVSLLPCSPEVEITFPN----DN 116
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
+ F+KVLTASD HG F + +K A ECLPPLDM+Q P+QE+VAKDLH + W+F
Sbjct: 117 NEQNIKYFTKVLTASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKF 176
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
KH FRG P+RHL T+GW FV K L GD+FVFLRGENGE VG+R + QQS M SSV
Sbjct: 177 KHTFRGTPKRHLFTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKTSHQQSDMSSSV 236
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 295
IS +SMH G +A+AS+A+ T+ MF V+YKP++S+FI++ +K+L+AVN KF R+ M+F
Sbjct: 237 ISKESMHHGFIASASNAIHTKCMFDVFYKPKSSKFIVNCDKFLDAVNMKFNTSSRFTMKF 296
Query: 296 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
EG D E +SGT+V +EDFS +WK S+WR+L+VQWDE A+I RP++VS WEIEP + S+
Sbjct: 297 EGHDFNEIIYSGTIVKMEDFSIYWKGSEWRNLQVQWDEAATIPRPNKVSLWEIEPLIPSS 356
Query: 356 TPNLVQPVLAKNKRPRLSMEVPPL 379
N+++ V+ NKR R E P+
Sbjct: 357 --NILKSVIQNNKRQREINEFGPI 378
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 22/185 (11%)
Query: 475 PHPSKPN-NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII 533
P SKP+ ND +++ + T +S RLFG++L A+S A P+ S
Sbjct: 377 PIISKPDYNDQMVQSTKENSTTNASSSFRLFGVDLT--ASSKARDVLEPLESYQ------ 428
Query: 534 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 593
K+ ++ F+E+ +Q Q ++ ++ L+ S TKV M+GV R
Sbjct: 429 -----------KNKTSEIFEEENLDQTQAVTSLTEIQRKELSFTTSSTKVHMEGVT--RT 475
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 653
+DLT GY+H+I ELE++F+I+G+LH ++W++ + D EGDMMLVGDDPW +FCN+VK
Sbjct: 476 VDLTVFDGYNHMIVELEKLFNIEGKLHMHSQWKLTFKDHEGDMMLVGDDPWPKFCNIVKE 535
Query: 654 IFICS 658
I I S
Sbjct: 536 IVISS 540
>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
Length = 326
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 241/291 (82%), Gaps = 4/291 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY+ELW ACAGPLV VP+QG+RVYYFPQGH+EQ+EASTNQ +Q++P++ L SKILCRV+
Sbjct: 34 LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKILCRVI 93
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L A+ +TDEV+AQITLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 94 NVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHG 153
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM+Q PTQ+LVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 154 GFSVLRRHAEECLPVLDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 213
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLR E EL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T
Sbjct: 214 SSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 272
Query: 257 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
TMF VYYKPR S +FI+ ++Y+E+V + +++GMR+KMRFEGE++PE+R
Sbjct: 273 TMFTVYYKPRISPAEFIVPFDQYMESVKSNYSIGMRFKMRFEGEEAPEQRL 323
>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
Length = 958
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/380 (54%), Positives = 269/380 (70%), Gaps = 17/380 (4%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAS-TNQELNQR-IPLFRLPSK 71
N + ELW ACAGPL+ +P++G V YFPQGHMEQ+ S +Q L QR + + LP +
Sbjct: 28 NKTSICLELWHACAGPLISLPRKGSLVVYFPQGHMEQVTTSLKHQCLEQRQMRPYDLPPQ 87
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-------RPKVHSFS 124
I CRV+N++L A+QETDEVYAQ+TL+PEP EP D + + H F
Sbjct: 88 IFCRVLNVNLHADQETDEVYAQVTLVPEP---EPAEKDLEEEEEDEEAGVLNKSTPHMFC 144
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG EWRF+HI+RGQPR
Sbjct: 145 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGVEWRFRHIYRGQPR 204
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV K L++GD +FLRGENGEL +G+R ARQQS +PSSV+SSQSMHLG
Sbjct: 205 RHLLTTGWSVFVNHKGLMSGDAVLFLRGENGELRLGIRRAARQQSVIPSSVLSSQSMHLG 264
Query: 245 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
VLA+A++AVAT++MF ++Y PR S +F+I +KY+++ N ++GMR+KMRFE ED+ E
Sbjct: 265 VLASAANAVATKSMFHIFYNPRASPAEFLIPYHKYVKSCNLPLSIGMRFKMRFETEDTAE 324
Query: 303 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
RR++G + G+ D P W SKWRSL V WDE A+ + +RVSPWEIEP ++ A N+
Sbjct: 325 RRYTGIITGIGDVDPAKWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPCISVAGLNVSS 384
Query: 362 PVLAKNKRPRLSMEVPPLDL 381
+ KR + S+ P+D
Sbjct: 385 GT--RIKRLKTSLPSTPVDF 402
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 15/187 (8%)
Query: 500 SCRLFGIELINHATS--SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
SC+LFG LI + A S ++P + +T ++ S ++ + K+
Sbjct: 742 SCKLFGFSLIEESACIDDAISSRIPRAGVTMNFLHMAHDQEPVQSSILRNLDQPLKDLHD 801
Query: 558 EQVQVSPKESQSKQSCLTS--------NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
+ E Q ++ R TKV QG VGRA+DL+ L GYD LI EL
Sbjct: 802 HSEGLESSEHQITFQTISKVPTSVPALGRKCTKVHKQGNIVGRAVDLSKLDGYDELISEL 861
Query: 610 EEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
E +F+++G L+ K W++VYTD+E D+MLVGDDPW EFCN+V +I I + ++V+KM+PG
Sbjct: 862 ERLFNMEGLLNDPEKGWQVVYTDNENDIMLVGDDPWQEFCNIVCKILIYTHEEVEKMAPG 921
Query: 669 SKLPMFS 675
MFS
Sbjct: 922 ----MFS 924
>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
Length = 912
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/398 (54%), Positives = 272/398 (68%), Gaps = 40/398 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQL----------------------------- 51
ELW ACAGPL+ +P +G V YFPQGHMEQL
Sbjct: 32 ELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFGFDSPLKFTPPVAPVLEKTAV 91
Query: 52 -----EASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 106
AS Q ++Q+ P + LP +ILCRV+N++L A+QE DEVYAQ+TL+PE ++E
Sbjct: 92 ASMHVAASIKQGVDQQTPPYNLPPQILCRVLNVNLHADQEMDEVYAQLTLVPESEKSEKC 151
Query: 107 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 166
+ PA S H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAK
Sbjct: 152 MEEQVPA-STSCTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAK 210
Query: 167 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
DLHG EWRF+HIFRGQPRRHLLTTGWS FV++KRLV+GD +FLRGENGEL +G+R +R
Sbjct: 211 DLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDAVLFLRGENGELRLGIRRASR 270
Query: 227 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 284
QQS SSV+SSQSMHLGVL A+HAVAT++MF +++ PRTS +F+I +KY+++ N+
Sbjct: 271 QQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNPRTSPAEFVIPYHKYVKSFNHP 330
Query: 285 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 343
A+GMR+KMRFE ED+ ERR++GT+ G+ D P W SKWRSLKV+WDE A+ R +RV
Sbjct: 331 LAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARWPGSKWRSLKVEWDEHAANERQERV 390
Query: 344 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 381
SPWEIEPF++S N+ P + KR R S + DL
Sbjct: 391 SPWEIEPFISSTGLNI--PAGPRIKRLRTSFQPTSTDL 426
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 19/197 (9%)
Query: 488 QVETGRKTETGTSCRLFGIELINHATS-SAPSEKVPVSSLTTEGHIIST------ISAAA 540
QV+ G + +C+LFG+ LI + S ++ S+ ++G ++ S++
Sbjct: 682 QVKDGGGVKGDRNCKLFGVSLIEESDCIDDGSSRMHKDSVISDGLHVALGKGPFHFSSSQ 741
Query: 541 DSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 592
D D + K+ + + EQ S ++K S S RS TKV QG AVGR
Sbjct: 742 DHD---QLEKDLDDHCGHLVPLRDTEQEITSQMVPKAKSSVQASGRSCTKVHKQGNAVGR 798
Query: 593 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMV 651
A+DL+ GYD LI ELE +F+++ L K W +VYTD+EGD+MLVGDDPW EFC++V
Sbjct: 799 AVDLSKFHGYDELIRELERLFNMENLLSDPEKGWHVVYTDNEGDIMLVGDDPWQEFCSIV 858
Query: 652 KRIFICSSQDVKKMSPG 668
+I I + ++V+KM+PG
Sbjct: 859 CKIMIYTREEVEKMTPG 875
>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
Length = 826
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/369 (58%), Positives = 260/369 (70%), Gaps = 42/369 (11%)
Query: 50 QLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ------ 102
Q+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE Q
Sbjct: 27 QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG 86
Query: 103 NEPTTPDPC-------PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL--- 152
N + D PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 87 NGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSF 146
Query: 153 ----------------DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
DM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 147 FDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 206
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 207 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTG 266
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
TMF VYYKPRT S+F++ + Y E++ ++GMR+KM FEGE++ E+RF+GT+VGV D
Sbjct: 267 TMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGD 326
Query: 315 FSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA---KNKRP 370
P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+ V P+ A K RP
Sbjct: 327 SDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPRTKRARP 383
Query: 371 RLSMEVPPL 379
+ P L
Sbjct: 384 NVLASSPDL 392
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 114/183 (62%), Gaps = 18/183 (9%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK---- 553
G+SC LFGI L + A P + S+ +G + A + D SD +K K
Sbjct: 615 GSSCMLFGISLDSPAK---PELLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDG 668
Query: 554 ---EKKQEQVQVSP---KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
+ +E+ Q P K QSKQ S+RS KV QG+A+GR++DLT YD LI
Sbjct: 669 AQHDSAREKHQSCPDGTKNIQSKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIA 727
Query: 608 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
EL++MFD G+L++ +K W +VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+
Sbjct: 728 ELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMN 787
Query: 667 PGS 669
PG+
Sbjct: 788 PGA 790
>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
Length = 620
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/388 (52%), Positives = 273/388 (70%), Gaps = 22/388 (5%)
Query: 5 LGSLSQPS--------SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN 56
LG + PS ++ LY+ELW ACAGPLV +P++G+RVYYFPQGH+EQL A
Sbjct: 24 LGGIGCPSWRQVQFQNCCNNALYKELWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQ 83
Query: 57 QELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP 116
Q+ ++ LPSKILC+V+N+ AE TD+VYAQI LLPEP Q + +PDP +
Sbjct: 84 QQSEHQMASLNLPSKILCKVINVQCKAEPITDQVYAQIMLLPEPEQIDVISPDPPLPEPE 143
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
R VHSF ++LT SD S+H F V +KHA CLPPLDM+Q P QELVA DL+G +W F+
Sbjct: 144 RCVVHSFRRILTVSDISSHDHFFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQ 203
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HIF+G+ +HLLTTGWS FV+SK+LV+GD F+FLRGENGEL VGVR L +++++ SS
Sbjct: 204 HIFQGKSNKHLLTTGWSAFVSSKKLVSGDMFIFLRGENGELRVGVRRLMGRKTNILSSAT 263
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMR 294
S+Q H +LA AS+A++T ++F V+Y+PRT S+FI+S+NKY+EA N+KF +GMR+ MR
Sbjct: 264 SNQIRH-SLLAVASYAISTGSLFCVFYEPRTSRSEFIVSVNKYIEARNHKFCIGMRFLMR 322
Query: 295 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 354
FEGE+ P R +GT+V +E SP W DS+WR KV+WDEP+ I P+RVSPWE+E +S
Sbjct: 323 FEGEEVPIERINGTIVSMET-SPRWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENISSS 381
Query: 355 ATPNLVQPVLAKNKRPRLS----MEVPP 378
+ P + + KR R S ME+ P
Sbjct: 382 SQP------VPRTKRSRSSSPGAMEISP 403
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 509 INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQ 568
+ + T SAPS E +S +SD S+ A + +K + ++
Sbjct: 475 VVYVTESAPSVN---KDFGMEEDGCPVLSLENESDQHSETANINQSEKLSVISCDTEKLC 531
Query: 569 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEI 627
SK+ + +V+MQG+A+GR++DLT ++ LI ELE MF+I+G+L T KW I
Sbjct: 532 SKKQITSC----AEVRMQGIALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKKWLI 587
Query: 628 VYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
VYTD + +M LVGD W CNMVK+I I
Sbjct: 588 VYTDADSEMKLVGDYQWEVVCNMVKKILI 616
>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
gi|223975541|gb|ACN31958.1| unknown [Zea mays]
Length = 766
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/345 (59%), Positives = 256/345 (74%), Gaps = 13/345 (3%)
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKV 120
+ LP KILC V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+V
Sbjct: 3 FYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRV 62
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFR
Sbjct: 63 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 122
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQPRRHLL +GWS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS S
Sbjct: 123 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 182
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
MHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE
Sbjct: 183 MHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGE 242
Query: 299 DSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
++PE+RF+GT+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P
Sbjct: 243 EAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SP 299
Query: 358 NLVQPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 399
+ P+ + + KRPR + +P P+ +AP Q H L
Sbjct: 300 PPINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 344
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 551 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 606
Query: 558 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 607 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 666
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 667 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 725
>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
Length = 840
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/364 (59%), Positives = 258/364 (70%), Gaps = 41/364 (11%)
Query: 51 LEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP--------- 100
+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE
Sbjct: 49 VEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGNVSKDK 108
Query: 101 SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL-------- 152
+ E P PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 109 VEEEEVVP---PAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLI 165
Query: 153 -----------DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
DM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRL
Sbjct: 166 VAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRL 225
Query: 202 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 261
VAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TMF V
Sbjct: 226 VAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTV 285
Query: 262 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH- 318
YYKPRT S+F++ + Y E++ ++GMR+KM FEGE++ E+RF+GT+VGV D P
Sbjct: 286 YYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSG 345
Query: 319 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA---KNKRPRLSME 375
W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+ V P+ A K RP +
Sbjct: 346 WADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPRTKRARPNVLAS 402
Query: 376 VPPL 379
P L
Sbjct: 403 SPDL 406
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 18/183 (9%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK---- 553
G+SC LFGI L + A P + S+ +G + A + D SD +K K
Sbjct: 629 GSSCMLFGISLDSPAK---PELLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDG 682
Query: 554 ---EKKQEQVQVSP---KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
+ E+ Q P K QSKQ S+RS KV QG+A+GR++DLT YD LI
Sbjct: 683 AQHDSATEKHQSCPDGTKNIQSKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIA 741
Query: 608 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
EL++MFD G+L++ +K W +VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+
Sbjct: 742 ELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMN 801
Query: 667 PGS 669
PG+
Sbjct: 802 PGA 804
>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
Length = 795
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/442 (51%), Positives = 298/442 (67%), Gaps = 25/442 (5%)
Query: 10 QPS-SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
QP+ N++ L E+W ACAGPLV +P+ G RV YFPQGH+EQ+ ASTNQ + ++P + L
Sbjct: 24 QPNHGNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNL 83
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT--TPD---PCPADSPRPKVHSF 123
PS+I CR++N+ L A++ETDEV+AQ+TL+PE Q + + T D PCP + K+ F
Sbjct: 84 PSQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCP----KRKLSMF 139
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LT+SDTSTHGGFSV R+ A ECLPPLD QS P QELVAKDLHG EW+F+HI+RGQP
Sbjct: 140 CKNLTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQP 199
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMH 242
RRHLLTTGWS FV+ K+LVAGD +FLRG+NGEL +GVR RQQ+S+ SS++SS SMH
Sbjct: 200 RRHLLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMH 259
Query: 243 LGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
LGVLA A+HAV+T+TMF ++Y PR S +F++ +KY++A + +VGMR+KMRFE E+S
Sbjct: 260 LGVLAAAAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEES 319
Query: 301 PERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
ERR+ GT+ GV D S W +SKWR L+V WDE + R +RVSPWEIEPF+A PN+
Sbjct: 320 SERRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIA---PNV 376
Query: 360 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR------LAQSHNLTQLSVTAEDKRIDN 413
P + + + P + P+ + SA+ L SH L S E R +
Sbjct: 377 ANPPTTQRVK-KFRPNTPANEFPTGKNNSDSAQAMHMRALQGSHALGMPSKEEEGLRGSS 435
Query: 414 HVA-WHHKHSDFSSNSNFMSRT 434
A W + D S RT
Sbjct: 436 PFAVWPYNRDDLKGESWIQLRT 457
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 19/174 (10%)
Query: 500 SCRLFGIELINH---ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
SC++FG LI A S P E S E + A S G + +
Sbjct: 597 SCKIFGFSLIEKSPPAASRNPEEARLNPSRGGE-QMTRCSGRAGPSAGNGSL-------E 648
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
E+ P + S ++C TKV +QG AVGRA+DL+ Y L+ EL+++F +
Sbjct: 649 HERCASRPASAWSLRTC-------TKVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLD 701
Query: 617 GQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
L + W++VYTD+EGDM+LVGDDPW EFCNMV+ I I S +V+K++ G+
Sbjct: 702 NALDDPDSGWQVVYTDNEGDMLLVGDDPWQEFCNMVRNIRILSPAEVEKLTQGA 755
>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
Length = 540
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/647 (37%), Positives = 340/647 (52%), Gaps = 157/647 (24%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +L K CAGPL D PK G E+L S N EL Q P+F +PSKI C V
Sbjct: 23 LNGQLLKLCAGPLFDTPKVG-----------EKLVTSINDELCQLKPIFDIPSKICCNVF 71
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+I+L E T+++YA++ LLP+ S E P ++ ++ F+KVL+ASDT GG
Sbjct: 72 SINLKVENNTNDIYAEVALLPDTSDVEIPIP---KNENNIQNINYFTKVLSASDTCKTGG 128
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
F + ++HA ECLP LDM+Q TP+QE++AKD+HG++W FKH
Sbjct: 129 FVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHT------------------- 169
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
LRGENGE VG+ A Q+ ++P+S IS QSMH GV+ATA + + +
Sbjct: 170 ------------LRGENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATALNTIKNKC 217
Query: 258 MFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
MFVV+YKPR+SQF+++ +K+++ VNNKF++G ++ M+FEG+D E R++GT+VGV DFS
Sbjct: 218 MFVVFYKPRSSQFLVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNETRYNGTIVGVGDFST 277
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 377
HWKDS+WRSLKVQWD A+I RPD+V
Sbjct: 278 HWKDSEWRSLKVQWDGTATIPRPDKV---------------------------------- 303
Query: 378 PLDLPSAASAPWSAR-LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 436
+PW L QS N+++ ++ID + S S T S
Sbjct: 304 ---------SPWEIEMLTQSSNISKSDYLKNKRQIDV----------YEFGSKMWSPTLS 344
Query: 437 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 496
G+ P ++ S + ST + N+ + + ++ T
Sbjct: 345 QGQESGQPSIQSSMRY------------------SFSTMY-----NEQMAQAMKETSTTT 381
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
TSCRLFG++L+N AT+ P E + DS+ K I+K F+++K
Sbjct: 382 ATTSCRLFGVDLVNPATTKDPVEPI-------------------DSNKKLKISKIFEDEK 422
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
+ VQ RS TKV M+GV + R +DLT GY LIDELE +FDIK
Sbjct: 423 IDHVQA---------------RSHTKVHMEGV-IERTVDLTIFDGYSQLIDELERLFDIK 466
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
G+LH KW++ + D+GDMM++GDDPW +FC M K IFICS + VK
Sbjct: 467 GELHMHNKWKMFFIYDDGDMMILGDDPWTKFCYMAKEIFICSKKGVK 513
>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
Length = 396
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/370 (57%), Positives = 274/370 (74%), Gaps = 17/370 (4%)
Query: 10 QPS-SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
QP+ N++ L E+W ACAGPLV +P+ G RV YFPQGH+EQ+ ASTNQ + ++P + L
Sbjct: 24 QPNHGNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNL 83
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT--TPD---PCPADSPRPKVHSF 123
PS+I CR++N+ L A++ETDEV+AQ+TL+PE Q + + T D PCP + K+ F
Sbjct: 84 PSQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCP----KRKLSMF 139
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LT+SDTSTHGGFSV R+ A ECLPPLD QS P QELVAKDLHG EW+F+HI+RGQP
Sbjct: 140 CKNLTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQP 199
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMH 242
RRHLLTTGWS FV+ K+LVAGD +FLRG+NGEL +GVR RQQ+S+ SS++SS SMH
Sbjct: 200 RRHLLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMH 259
Query: 243 LGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
LGVLA A+HAV+T+TMF ++Y PR S +F++ +KY++A + +VGMR+KMRFE E+S
Sbjct: 260 LGVLAAAAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEES 319
Query: 301 PERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
ERR+ GT+ GV D S W +SKWR L+V WDE + R +RVSPWEIEPF+A PN+
Sbjct: 320 SERRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIA---PNV 376
Query: 360 VQPVLAKNKR 369
P + R
Sbjct: 377 ANPPTTQRAR 386
>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 750
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/356 (57%), Positives = 256/356 (71%), Gaps = 27/356 (7%)
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKV 126
+NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K
Sbjct: 1 MNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKT 60
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRH
Sbjct: 61 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRH 120
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLGVL
Sbjct: 121 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVL 180
Query: 247 ATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
ATA HAV T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E+R
Sbjct: 181 ATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 240
Query: 305 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
F+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+
Sbjct: 241 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPL 297
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 408
+ KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 298 PVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 353
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 542
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 524 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 577
Query: 543 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 593
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 578 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 637
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 638 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 697
Query: 653 RIFICSSQDVKKMSPGS 669
+IFI + ++V++M+PG+
Sbjct: 698 KIFIYTREEVERMNPGA 714
>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
Length = 801
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/341 (56%), Positives = 251/341 (73%), Gaps = 5/341 (1%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+DDLY ELW CAGPLV++ + GQ+V YFPQGH+EQ+EA TNQ+ +P++ LPSKI C
Sbjct: 133 NDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYNLPSKIFC 192
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDT 132
+VV + L AE TDEV+AQ+TLLPE Q E +PD + R +SFSK LT SDT
Sbjct: 193 KVVYVQLKAEACTDEVFAQVTLLPEAKQ-EWQSPDHGNSQFFPRRTHSYSFSKTLTPSDT 251
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
+THGGFSV ++HA ECLPPLDM Q P QEL+AKDLHG EWRF+HIFRGQP+RHLLT+GW
Sbjct: 252 NTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGW 311
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FVTSK+LVAGD +FLRG NGEL VGVR R Q+++ +SV+S SM G+LA+A HA
Sbjct: 312 SQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFHA 371
Query: 253 VATQTMFVVYYKPRTS-QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
++T TMF VY++P TS +FII ++Y+++ N ++VG R++M FEGE+ ++R +GT+VG
Sbjct: 372 ISTGTMFTVYFRPWTSPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQRCAGTIVG 431
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
+ED W +S+WR KVQWD P+RV+ W IEP
Sbjct: 432 IEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPI 472
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 502 RLFGIELINHATSSAPSEKVPVSS-LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 560
+LFG+ LIN + + PS +V SS L + I T ++ ++ + + V
Sbjct: 638 KLFGVNLIN-SPAELPSPQVASSSELQSPCSIPPTSQSSISESIQA-------SEPSKSV 689
Query: 561 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL- 619
+ Q K C RS TKV G A+GR++DL GYD LI EL++MFD G L
Sbjct: 690 SGDLSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLM 749
Query: 620 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+W + YTDDEGDMML+GD PW EF +MV+RIFIC ++ ++++
Sbjct: 750 DGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLN 796
>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/341 (56%), Positives = 251/341 (73%), Gaps = 5/341 (1%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+DDLY ELW CAGPLV++ + GQ+V YFPQGH+EQ+EA TNQ+ +P++ LPSKI C
Sbjct: 28 NDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYNLPSKIFC 87
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDT 132
+VV + L AE TDEV+AQ+TLLPE Q E +PD + R +SFSK LT SDT
Sbjct: 88 KVVYVQLKAEACTDEVFAQVTLLPEAKQ-EWQSPDHGNSQFFPRRTHSYSFSKTLTPSDT 146
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
+THGGFSV ++HA ECLPPLDM Q P QEL+AKDLHG EWRF+HIFRGQP+RHLLT+GW
Sbjct: 147 NTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGW 206
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FVTSK+LVAGD +FLRG NGEL VGVR R Q+++ +SV+S SM G+LA+A HA
Sbjct: 207 SQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFHA 266
Query: 253 VATQTMFVVYYKPRTS-QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
++T TMF VY++P TS +FII ++Y+++ N ++VG R++M FEGE+ ++R +GT+VG
Sbjct: 267 ISTGTMFTVYFRPWTSPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQRCAGTIVG 326
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
+ED W +S+WR KVQWD P+RV+ W IEP
Sbjct: 327 IEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPI 367
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 502 RLFGIELINHATSSAPSEKVPVSS-LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 560
+LFG+ LIN + + PS +V SS L + I T ++ ++ + + V
Sbjct: 533 KLFGVNLIN-SPAELPSPQVASSSELQSPCSIPPTSQSSISESIQA-------SEPSKSV 584
Query: 561 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL- 619
+ Q K C RS TKV G A+GR++DL GYD LI EL++MFD G L
Sbjct: 585 SGDLSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLM 644
Query: 620 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+W + YTDDEGDMML+GD PW EF +MV+RIFIC ++ ++++
Sbjct: 645 DGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLN 691
>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 505
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/494 (42%), Positives = 297/494 (60%), Gaps = 57/494 (11%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 195
+ +++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+ MF V YKP +SQF+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++GV D
Sbjct: 259 KCMFNVVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDM 318
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 319 SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH------ 370
Query: 376 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 435
W + ++ SN + +
Sbjct: 371 -----------------------------------------WLQLNEIGATLSNLWTCQE 389
Query: 436 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRK 494
+ SP + + + AI+D+K +S HS + P+ + N+D +++ +
Sbjct: 390 IGQRSMNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDIT 447
Query: 495 TETGTSCRLFGIEL 508
TE TSC LFG++L
Sbjct: 448 TEATTSCLLFGVDL 461
>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
Length = 798
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/360 (55%), Positives = 249/360 (69%), Gaps = 59/360 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+YRELW ACAGPLV VP++ RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 41 IYRELWHACAGPLVTVPRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 100
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPEP+Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 101 NVDLKAEVDTDEVYAQITLLPEPNQDENAVEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLR + PS I
Sbjct: 221 SSKRLVAGDAFIFLR------------------TSPSEFI-------------------- 242
Query: 257 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 243 ---------------VPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSD 287
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 374
P W SKWRSLKV+WDE +SI RP+RVSPW+IEP +A P + PV + + KRPR +M
Sbjct: 288 PTRWAKSKWRSLKVRWDETSSIPRPERVSPWKIEPALA---PPALSPVPMTRPKRPRSNM 344
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 500 SCRLFGIELINHA--TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+CRLFGI L+N+ T S S++ ++ G D S +K + ++
Sbjct: 571 NCRLFGIPLVNNVNETDSTMSQRNNLNE--NSGFTQMASPKVQDLSDHSKGSKSTNDHRE 628
Query: 558 EQVQVSPKESQSKQS-CLT-SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 615
+ K+ +K S C T SNRS TKV QG+A+GR++DL+ Y+ LI EL+ +F+
Sbjct: 629 QGRPSQAKQPHAKDSHCKTNSNRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDMLFEF 688
Query: 616 KGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+ M+P
Sbjct: 689 NGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRNMNP 741
>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
Length = 774
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/366 (55%), Positives = 261/366 (71%), Gaps = 10/366 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCRV 76
L E W ACAGPLV +P G RV YFPQGH+EQ+ ASTNQ + +IP + LPS+I CRV
Sbjct: 72 LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRV 131
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+N+ L A +ETDEVYAQ+TL+PE Q + + P S + K+ FSK LT+SDTSTHG
Sbjct: 132 LNLSLGAYRETDEVYAQMTLVPENEQLDQSLELDEPTASSKAKLSMFSKNLTSSDTSTHG 191
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A EC P LD Q+ P QE++AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV
Sbjct: 192 GFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFV 251
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATASHAVAT 255
+ K+LVAGDT +F+RG+NGEL +G+R R Q S SS++SS SM +GVLA A+HAV+T
Sbjct: 252 SQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAAHAVST 311
Query: 256 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVVG 311
+TMF V+Y PR S +F++ +KY+++ +GMR+KMRFE EDS ER R+ GT+ G
Sbjct: 312 KTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERSVRYMGTITG 371
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W SKWR LKV WDE A+ R +RVSPWEIEPF+A PN+ PV K RP
Sbjct: 372 IGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIA---PNVTPPVSTKRFRP 428
Query: 371 RLSMEV 376
+ ++
Sbjct: 429 TMLTDI 434
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 636
+R+ TKV G AVGRALDL+ GY L++EL+ +F I L+ ++W+ VY D+EGDM
Sbjct: 657 SRTCTKVHKHG-AVGRALDLSKFRGYTQLLEELQHLFGIDESLNG-SEWQAVYVDNEGDM 714
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+LVGDDPW EFC+ V+ I I S +++K++
Sbjct: 715 LLVGDDPWEEFCSTVRCIRILSPAEIQKLT 744
>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
Length = 549
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/352 (53%), Positives = 255/352 (72%), Gaps = 16/352 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LWK CAGPL D PK G E+L AS + EL Q P+F +PSKI C V
Sbjct: 23 LNDKLWKLCAGPLFDTPKIG-----------EKLVASMDDELCQLKPIFDIPSKICCNVF 71
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+I+L E T+E+YA+++LLP+ S E P ++ ++ F+KVL+ASDTST+GG
Sbjct: 72 SINLKVEPSTNEIYAEVSLLPDTSDVEIPIP---KNENNIQNINYFTKVLSASDTSTNGG 128
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
F + ++HA ECLP LDM+Q TP+QE++AKD+HG+EW FKH RG P+RHL T+GW+ F
Sbjct: 129 FVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLFTSGWNEFAK 188
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
K+LVAGD+FVFLRGENGE VG+ A QQ ++P+S+IS +SMH V+ATA +A+ +
Sbjct: 189 GKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVVATALNAIENKC 248
Query: 258 MFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
MFVV+YKPR+SQFI++ +K+++ VNNKF++G ++ M+FEG+D E R++GTVVGV DFS
Sbjct: 249 MFVVFYKPRSSQFIVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNEIRYNGTVVGVRDFST 308
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
HWKDS+WRSL+VQWDE A+I RPD+VSPWEIE S+ N+ + K+KR
Sbjct: 309 HWKDSEWRSLEVQWDEAATIPRPDKVSPWEIELLTHSS--NIFKSDALKHKR 358
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 35/182 (19%)
Query: 482 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD 541
N+ +++ ++ T TSCRLFG++L+ A + P E +
Sbjct: 376 NEQMVQAMKEPSTTTATTSCRLFGVDLMVPAITKDPVEPIV------------------- 416
Query: 542 SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
S+ K I+K F+++K + VQ +SRTKV M+GV + R +DLT G
Sbjct: 417 SNKKCKISKIFEDEKVDHVQA---------------KSRTKVHMEGV-IERTVDLTIFDG 460
Query: 602 YDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
Y+ LIDELE +FDIKG+LH KW++ + ++GDMM++GDDPW +FCNM K IFICS +D
Sbjct: 461 YNQLIDELERLFDIKGELHMHNKWKMFFIYNDGDMMILGDDPWPKFCNMAKEIFICSKED 520
Query: 662 VK 663
VK
Sbjct: 521 VK 522
>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
Length = 781
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/370 (54%), Positives = 259/370 (70%), Gaps = 17/370 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCRVVNI 79
E W ACAGPLV +P G RV YFPQGH+EQ+ ASTNQ + +IP + LPS+I CRV+N+
Sbjct: 75 EAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRVLNL 134
Query: 80 HLMAEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
L A +ETDEVYAQ+TL+PE Q + + P S + K+ F K LT+S
Sbjct: 135 SLGAYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTASSKAKLSMFCKNLTSS 194
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A EC P LD Q+ P QE++AKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 195 DTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRHLLTT 254
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATA 249
GWS FV+ K+LVAGDT +F+RG+NGEL +G+R R Q S SS++SS SM +GVLA A
Sbjct: 255 GWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAA 314
Query: 250 SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+HAV+T+TMF V+Y PR S +F++ +KY+++ +GMR+KMRFE EDS ERR+ G
Sbjct: 315 AHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERRYMG 374
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
T+ G+ D P W SKWR LKV WDE A+ R +RVSPWEIEPF+A PN+ PV K
Sbjct: 375 TITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIA---PNVTPPVSTK 431
Query: 367 NKRPRLSMEV 376
RP + ++
Sbjct: 432 RFRPTMLTDI 441
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 636
+R+ TKV G AVGRALDL+ GY L++EL+ +F I L+ ++W+ VY D+EGDM
Sbjct: 664 SRTCTKVHKHG-AVGRALDLSKFRGYTQLLEELQHLFGIDESLNG-SEWQTVYVDNEGDM 721
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+LVGDDPW EFC V+ I I S +++K++
Sbjct: 722 LLVGDDPWEEFCTTVRCIRILSPAEIQKLT 751
>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 285
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/278 (67%), Positives = 221/278 (79%), Gaps = 1/278 (0%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN-QELNQRIP 64
G+ + P SD LY+ELW ACAGPLV VP+QG+RVYYFPQGHMEQLEAS + Q+L+Q +P
Sbjct: 7 GAAAGPGMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLP 66
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS 124
+F LP KILCRVVN+ L AE ++DEVYAQI L PE QNE T+ D P + + HSF
Sbjct: 67 MFDLPPKILCRVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDAEPQEREKCTAHSFC 126
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQP+
Sbjct: 127 KTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPK 186
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV+SKRLV+GD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLG
Sbjct: 187 RHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLG 246
Query: 245 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVN 282
VLATASHA++T T+F V+YKPR ++ L L+ +
Sbjct: 247 VLATASHAISTGTLFSVFYKPRFDVVLLYLYICLQCTS 284
>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 251/345 (72%), Gaps = 11/345 (3%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAST-----NQELNQRIPLFRLPSK 71
DLY ELW ACAGPLV VP+ G +V+YFPQGHMEQ+ ST N+E +P++ LP K
Sbjct: 1 DLYTELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIYDLPYK 60
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTA 129
ILC+VV++ L AE TDEV+A+ITLLP ++E ++ + K SF+K LT
Sbjct: 61 ILCKVVHVELKAEAGTDEVFARITLLPVAEEDELSSNKDGKSLPLHRKTCARSFTKKLTP 120
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDT THGGFSV ++HA +CLPPLD +Q P QEL+AKDLHG+EW FKHI+RGQP+RHL+T
Sbjct: 121 SDTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKRHLIT 180
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
+GWSTFV+SKRLVAGD+F+FLRGE+GEL VGVR + ++++ ++++SS SM LG+L++A
Sbjct: 181 SGWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSMQLGILSSA 240
Query: 250 SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
SHA+ T +MF +Y+ P TS +FII ++Y+++ ++ G R++M FEGE+ E+RF G
Sbjct: 241 SHAITTGSMFTIYFHPWTSPAEFIIPYDQYMKSAEIDYSAGTRFRMLFEGEECAEQRFEG 300
Query: 308 TVVGVEDFS-PHWKDSKWRSLKVQWDEPAS-ITRPDRVSPWEIEP 350
TVVG ED W +S+WR LKV+WD + +RVSPW IEP
Sbjct: 301 TVVGTEDVDHIRWPNSEWRILKVKWDAASEPFVHQERVSPWNIEP 345
>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
Length = 919
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/403 (52%), Positives = 274/403 (67%), Gaps = 48/403 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLE---------------------------- 52
ELW ACAGPL+ +P +G RV YFPQGH+EQ+
Sbjct: 38 ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHRGGRGSFLNVNHAAAPMAEEASS 97
Query: 53 --------ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE 104
+S +Q +NQ++ ++LP +ILCRV+N++L A+QE DEVYAQ+TL+P+ +NE
Sbjct: 98 AAALNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKNE 157
Query: 105 PTTPDPC---PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 161
+ P+ +P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+Q
Sbjct: 158 KCMEEQLSVPPSSTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQ 213
Query: 162 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 221
ELVAKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+ KRLVAGD +FLR ENGEL +G+
Sbjct: 214 ELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGI 273
Query: 222 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 279
R ++QQSS+PSSV+SS +H GVLA +HAVAT++MF +YY PRTS +F+I +KY++
Sbjct: 274 RRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIYYNPRTSPTEFVIPYHKYVK 333
Query: 280 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 338
+ N+ F++GMR+KMRFE ED+ ERR++GT+VG+ D P W +S+WRS KV WDE A+
Sbjct: 334 SFNHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSRWRSFKVGWDEHAAQE 393
Query: 339 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 381
R DRVSPWEIEPF ++ N + + KR R S P DL
Sbjct: 394 RQDRVSPWEIEPFTSATGLNALPG--PRVKRLRTSFPSAPTDL 434
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 112/206 (54%), Gaps = 25/206 (12%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADS-DGKSDIA--- 549
K + +C+LFG L+ + P++S TE + S S DG A
Sbjct: 695 KVKGERNCKLFGFSLLKESVCV----DDPINSAMTEDGVSSEGGLHVPSGDGPLQTAHSK 750
Query: 550 ------KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 597
KE ++ + E ++ + S S RS TKV QG AVGRA+DL+
Sbjct: 751 DSDQSEKELHNHYGHEITLRSVEQEISSYAKLRNSVQASGRSCTKVHKQGNAVGRAVDLS 810
Query: 598 TLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
L GYD LI ELE +F+++G L T K W IVYTD+EGD+MLVGDDPW EFCN+V +I I
Sbjct: 811 KLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDIMLVGDDPWQEFCNIVCKILI 870
Query: 657 CSSQDVKKMSPGSKLPMFSIEGFGLF 682
C+ ++V+KM+PG MFS + F
Sbjct: 871 CTQEEVQKMTPG----MFSEDAQTCF 892
>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
Length = 905
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/371 (50%), Positives = 251/371 (67%), Gaps = 8/371 (2%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL--FRLPSK 71
N + ELW ACAGPL+ +PK+G V YFPQGH+EQL ++ Q+ P+ + LP +
Sbjct: 33 NKSSICMELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQ 92
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEP---SQNEPTTPDPCPADSPRPKVHSFSKVLT 128
I CRV+N++L+A+QETDEV+AQ+TL+PEP N + + +P +H F K LT
Sbjct: 93 IFCRVLNVNLLADQETDEVFAQVTLVPEPEPVGDNFQDEENQNASVLSKPTLHMFCKTLT 152
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EW+F+HI+RGQPRRHLL
Sbjct: 153 ASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQPRRHLL 212
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV+ K L +FLRGENGEL +G+R R+ SS+PSSV S Q+++L V+A
Sbjct: 213 TTGWSVFVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVYLSVIAA 272
Query: 249 ASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A++AVAT++MF ++Y PR S +FII KY+ + VG R++M+FE ED+ E+R++
Sbjct: 273 ATNAVATKSMFHIFYNPRASPAEFIIPYQKYVRSCKQSLLVGTRFRMKFESEDTAEKRYT 332
Query: 307 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
G V + D P W SKWRSLKV WDE + R +RVSPWEIEP +A + N+
Sbjct: 333 GIVTSIGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEPSIAVSGVNVSSGTRC 392
Query: 366 KNKRPRLSMEV 376
K R L + V
Sbjct: 393 KRLRANLPVSV 403
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 109/192 (56%), Gaps = 19/192 (9%)
Query: 500 SCRLFGIELINHATSSAPSEK--------VPVSSLTTEGHIISTISAAADSDGKSDIAKE 551
SC+LFGI L A +EK + + S TT+ HI ++ + + K
Sbjct: 724 SCKLFGISLTEELPCVAVTEKGDFGKHEGMDIKSFTTKSHI--NFGSSPNYFSHPEPFKG 781
Query: 552 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
FKE+ ++S ++ S T R TKV QG VGRA+DL+ GYD LI+ELE
Sbjct: 782 FKER----AKLSTEQEISFPIQPTIVRKCTKVHKQGSVVGRAIDLSKFDGYDQLINELER 837
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
+FD++G L+ K W++VYTD+E D+MLVGDDPW EFCN+V +I I + +V+K+ PG
Sbjct: 838 LFDMEGLLNNPEKGWQVVYTDNEDDVMLVGDDPWQEFCNIVCKILIYTHDEVQKLRPG-- 895
Query: 671 LPMFSIEGFGLF 682
MFS E F
Sbjct: 896 --MFSDEAVSCF 905
>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
Length = 920
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/400 (51%), Positives = 272/400 (68%), Gaps = 42/400 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLE---------------------------- 52
ELW ACAGPL+ +P +G RV YFPQGH+EQ+
Sbjct: 38 ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVTPMAEEASS 97
Query: 53 --------ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE 104
+S +Q +NQ++ ++LP +ILCRV+N++L A+QE DEVYAQ+TL+P+ ++E
Sbjct: 98 AASLNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKSE 157
Query: 105 PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 164
+ P P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELV
Sbjct: 158 KCIEEQLPV-PPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELV 216
Query: 165 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 224
AKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+ KRLVAGD +FLR ENGEL +G+R
Sbjct: 217 AKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIRRA 276
Query: 225 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVN 282
++QQSS+PSSV+SS +H GVLA +HAVAT++MF ++Y PRTS +F+I +KY+++ N
Sbjct: 277 SQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIFYNPRTSPTEFVIPYHKYVKSFN 336
Query: 283 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 341
+ F++GMR+KMRFE ED+ ERR++GT+VG+ D P W +S+WRS KV WDE A+ R +
Sbjct: 337 HSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSEWRSFKVGWDEHAAQERQE 396
Query: 342 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 381
RVSPWEIEPF ++ N + + KR R S P DL
Sbjct: 397 RVSPWEIEPFTSATGLNALPG--PRVKRLRTSFPTAPTDL 434
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 115/218 (52%), Gaps = 25/218 (11%)
Query: 482 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTIS---- 537
++T Q + K + +C+LFG L+ + P+SS TE + S
Sbjct: 684 SETPCPQAKDISKVKGERNCKLFGFSLLKESACV----DDPISSAMTEDGVSSDGGLHVP 739
Query: 538 ------AAADSDGKSDIAKEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSRTKVQM 585
A S KE ++ + E ++ + S S RS TKV
Sbjct: 740 PGDGPFQTAHSKHSDQSEKELHNHYGHEITLRSMEQEISSYAKLRNSVQASGRSCTKVHK 799
Query: 586 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 644
QG AVGRA+DL+ L GYD LI ELE +F+++G L T K W IVYTD+EGD+MLVGDDPW
Sbjct: 800 QGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDIMLVGDDPW 859
Query: 645 HEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGFGLF 682
EFCN+V +I IC+ ++V+KM+PG MFS + F
Sbjct: 860 QEFCNIVCKILICTQEEVQKMTPG----MFSEDAQSCF 893
>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 652
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/416 (49%), Positives = 256/416 (61%), Gaps = 79/416 (18%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE---------------------------- 230
Query: 245 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
FVV S ++Y E++ +++GMR+KMRFEGE++ E+R
Sbjct: 231 --------------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 265
Query: 305 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
F+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+
Sbjct: 266 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPL 322
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 408
+ KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 323 PVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 378
>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 775
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/416 (49%), Positives = 256/416 (61%), Gaps = 79/416 (18%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE---------------------------- 230
Query: 245 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
FVV S ++Y E++ +++GMR+KMRFEGE++ E+R
Sbjct: 231 --------------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 265
Query: 305 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
F+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+
Sbjct: 266 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPL 322
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 408
+ KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 323 PVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 378
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 542
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 549 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 602
Query: 543 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 593
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 603 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 662
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 663 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 722
Query: 653 RIFICSSQDVKKMSPGS 669
+IFI + ++V++M+PG+
Sbjct: 723 KIFIYTREEVERMNPGA 739
>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 777
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/416 (49%), Positives = 256/416 (61%), Gaps = 79/416 (18%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 21 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 80
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 81 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 140
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 141 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 200
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 201 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE---------------------------- 232
Query: 245 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
FVV S ++Y E++ +++GMR+KMRFEGE++ E+R
Sbjct: 233 --------------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 267
Query: 305 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
F+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+
Sbjct: 268 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPL 324
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 408
+ KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 325 PVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 380
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 542
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 551 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 604
Query: 543 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 593
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 605 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 664
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 665 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 724
Query: 653 RIFICSSQDVKKMSPGS 669
+IFI + ++V++M+PG+
Sbjct: 725 KIFIYTREEVERMNPGA 741
>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 771
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 243/378 (64%), Gaps = 68/378 (17%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE---------------------------- 230
Query: 245 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
FVV S ++Y E++ +++GMR+KMRFEGE++ E+R
Sbjct: 231 --------------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 265
Query: 305 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
F+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+
Sbjct: 266 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPL 322
Query: 364 LAKNKRPRLSMEVPPLDL 381
+ KR R S+ P D+
Sbjct: 323 PVRFKRSRSSVNALPSDV 340
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 492 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 542
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 545 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 598
Query: 543 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 593
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 599 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 658
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 659 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 718
Query: 653 RIFICSSQDVKKMSPGS 669
+IFI + ++V++M+PG+
Sbjct: 719 KIFIYTREEVERMNPGA 735
>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 661
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/416 (49%), Positives = 256/416 (61%), Gaps = 79/416 (18%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE---------------------------- 230
Query: 245 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
FVV S ++Y E++ +++GMR+KMRFEGE++ E+R
Sbjct: 231 --------------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 265
Query: 305 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
F+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+
Sbjct: 266 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPL 322
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 408
+ KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 323 PVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 378
>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
Length = 709
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 255/363 (70%), Gaps = 16/363 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ----ELNQ-RIPLFRLPSKILCR 75
ELW ACAGPL+ +PK+G V YFPQGH+EQ+ A+++ E +Q R+ + LP +I CR
Sbjct: 50 ELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTYDLPPQIFCR 109
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTA 129
V+++ L A+QE D+VYAQ+TLLPE NE + + ++ H F K LTA
Sbjct: 110 VLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFCKTLTA 169
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLT
Sbjct: 170 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLT 229
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS FV K LV+GD +FLRGE+GEL +G+R +R SS+P SV+SSQ +HL +L+ A
Sbjct: 230 TGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLSILSPA 289
Query: 250 SHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
++A++T++MF V+Y PR S+F+I KY+++++ ++GMR+KMR E EDS E+R +G
Sbjct: 290 ANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAEKRCTG 349
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
+ G D P W +SKWR L V+WD+ + + R +RVSPWEIEP + + P L PV +
Sbjct: 350 AITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSL--SLPALSCPVAPR 407
Query: 367 NKR 369
KR
Sbjct: 408 IKR 410
>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
Length = 1043
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 256/382 (67%), Gaps = 18/382 (4%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
+AN + S +Q D LY ELW+ACAG V VP+ RV+YFPQGH+EQ+ A T + +
Sbjct: 394 IANDVSSFTQHPCVQDILYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPD 453
Query: 61 Q--RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-----EPTTPDPCPA 113
IP++ LPSKILC+++N+ L AE +DEVYAQ+TL+PE ++ E D P+
Sbjct: 454 SHLEIPVYDLPSKILCKIMNVELKAEAYSDEVYAQVTLVPEVQKDNLCFEEEVNIDQIPS 513
Query: 114 DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW 173
R +SFSK+LT SDTSTHGGFSV +K+A EC PPLDM TP QE+VAKDL+G+EW
Sbjct: 514 ---RNAAYSFSKILTPSDTSTHGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEW 570
Query: 174 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS--SM 231
RF+HI+RGQP+RHLLT+GWS FV +K+LVAGD+ +F+RGE+GEL VG+R A S S
Sbjct: 571 RFRHIYRGQPKRHLLTSGWSLFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQ 630
Query: 232 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGM 289
SS+IS SM LG+L AS+AV +TMF+VYY+P T+ +FI+ L YL++ + +G
Sbjct: 631 SSSLISGHSMQLGILTNASNAVGNRTMFLVYYRPWTNPFEFIVHLQTYLKSTLQDYPIGT 690
Query: 290 RYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPA-SITRPDRVSPWE 347
R +M+ E E+S RR +GT++G ED S W S WR LKVQWD P+RV PW
Sbjct: 691 RVQMQHEVEES-LRRLAGTIIGNEDIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCPWW 749
Query: 348 IEPFVASATPNLVQPVLAKNKR 369
IEP ++ V P L K+
Sbjct: 750 IEPLESAKEKKQV-PALPTKKK 770
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 562 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 621
V+P ++ K C+ +NRS TKV G A+GRA+DL GY LI EL+ MFD +G L +
Sbjct: 950 VAPGKTCKKCRCV-NNRSCTKVLKLGNALGRAVDLARFNGYTELIAELDSMFDFQGTLIS 1008
Query: 622 -RTKWEIVYTDDEGDMMLVGDDPWH 645
+ W + DDEGDMM +GD PW
Sbjct: 1009 GGSGWHVTCLDDEGDMMQLGDYPWQ 1033
>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
Length = 810
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/382 (48%), Positives = 246/382 (64%), Gaps = 23/382 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQ+ A ++ +P F L +I C+VV
Sbjct: 44 IYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-APSSPFSPMEMPTFDLQPQIFCKVV 102
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTP--------------DPCPADSPRPKVHSF 123
N+ L+A +E DEVY Q+ LLP+P P PA S H F
Sbjct: 103 NVQLLANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKS---TPHMF 159
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQP
Sbjct: 160 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 219
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWS FV+ K LV+GD +FLRGE+GEL +G+R R ++ +P SVI Q+ +
Sbjct: 220 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNSYP 279
Query: 244 GVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 301
VL+ ++A++T++MF V Y PR S F++ KY++++ N +G R+KMRFE +DSP
Sbjct: 280 SVLSVVANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNPVCIGTRFKMRFEMDDSP 339
Query: 302 ERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
ERR SG V G+ D +P+ W +SKWR L V+WDE +RVSPWEI+P V + P L
Sbjct: 340 ERRCSGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSV--SLPPLS 397
Query: 361 QPVLAKNKRPRLSMEVPPLDLP 382
+ K+ R S++ P D P
Sbjct: 398 IQSSPRLKKLRTSLQATPPDNP 419
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 566 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK- 624
ES + S + RS TKV QG VGRA+DL+ L GY L+ ELE +F ++G L K
Sbjct: 654 ESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLSELERLFSMEGLLQDPNKG 713
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
W I+YTD E D+M+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 714 WRILYTDSENDVMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 757
>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/340 (51%), Positives = 238/340 (70%), Gaps = 25/340 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY +LWK CAGPL D PK G E+L S N EL Q P+F +PSKI C V
Sbjct: 23 LYDQLWKLCAGPLFDPPKIG-----------EELVTSINDELCQLKPVFNIPSKIRCNVF 71
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+I L E TDE+YA+I+LLP+ S+ E PT+ ++ + F+KVL+ASDTS G
Sbjct: 72 SIKLKVETTTDEIYAEISLLPDTSEVEIPTSK----CENNIQNIKCFTKVLSASDTSKKG 127
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GF + ++HA ECLPPLDM+ TP+QE+ A D+HG+EW+FKH +G P+RHL T+GW+ F
Sbjct: 128 GFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHLFTSGWNEFA 187
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLA-RQQSSMPSSVISSQSMHLGVLATASHAVAT 255
+K+LV GD+F+FLRGENGE VG++ A QQ ++PSS+IS +SMH GV+ATA +A+
Sbjct: 188 KAKKLVVGDSFIFLRGENGESRVGIKKAAHHQQENIPSSIISKESMHHGVVATALNAIKN 247
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+ MFVV+YKPR+SQF+++++K+ + VN KF++G R+ M+FEG+D E E F
Sbjct: 248 KCMFVVFYKPRSSQFVVNIDKFRDGVNKKFSIGSRFLMKFEGKDFNEIS--------ERF 299
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
PHWKDS+WR L+VQWDE A+I RPD+VSPWEIEP S+
Sbjct: 300 LPHWKDSEWRCLEVQWDEAATIPRPDKVSPWEIEPLTHSS 339
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 36/187 (19%)
Query: 478 SKPN-NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI 536
SKPN N+ +++ ++ T TS RLFG++L KVP + + I
Sbjct: 377 SKPNYNEQMVQAMKETSTTTATTSYRLFGVDL-----------KVPAKTKDSIEPI---- 421
Query: 537 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 596
+S KS I+K F+E+K + +Q RS TKV+M+G A+ R +DL
Sbjct: 422 ----NSYKKSKISKIFEEEKVDHIQT---------------RSHTKVRMEG-AMERTVDL 461
Query: 597 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+ GY+ LIDELE +FDIKG+LH +W+IV+ + +GD+ML+GDDPW +FCN + IFI
Sbjct: 462 SIFDGYNQLIDELERLFDIKGKLHIHNQWKIVFINADGDIMLLGDDPWPKFCNTAEEIFI 521
Query: 657 CSSQDVK 663
CS D K
Sbjct: 522 CSKNDAK 528
>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
Length = 824
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/358 (52%), Positives = 246/358 (68%), Gaps = 11/358 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E + IP + LP ++C++ NI
Sbjct: 27 ELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNI 86
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+TL P +Q + + R F K LTASDTSTHGGFS
Sbjct: 87 TLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFS 146
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
+ R+ A + PPLD +Q P QE+VA+DLH EWRF+HI+RGQPRRHLLTTGWS FV++K
Sbjct: 147 IPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAK 206
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RL GD +F+R E G+L +G+R RQQ+SMP S++S+ SM++G+LA A+HA +T + F
Sbjct: 207 RLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRF 266
Query: 260 VVYYKPRT--SQFIISLNKYLEAVNNKFAV--GMRYKMRFEGEDSPERRFSGTVVGVEDF 315
++Y PR S+F+I L+KY AV N V GMR++M+FE E+S RR +GT+VG D
Sbjct: 267 TIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSGDL 326
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLA-KNKRP 370
P W +S WRSLKV+WDEPA+ + R+S WEIEP ++TP LV P ++KRP
Sbjct: 327 DPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEP---ASTPYLVCSPSFTFRSKRP 381
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKV G +VGR+LDLT L YD L EL MF ++GQL R+ W++V+ D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I S ++ M+
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPAELSHMN 795
>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
Length = 824
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/358 (52%), Positives = 246/358 (68%), Gaps = 11/358 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E + IP + LP ++C++ NI
Sbjct: 27 ELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNI 86
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+TL P +Q + + R F K LTASDTSTHGGFS
Sbjct: 87 TLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFS 146
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
+ R+ A + PPLD +Q P QE+VA+DLH EWRF+HI+RGQPRRHLLTTGWS FV++K
Sbjct: 147 IPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAK 206
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RL GD +F+R E G+L +G+R RQQ+SMP S++S+ SM++G+LA A+HA +T + F
Sbjct: 207 RLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRF 266
Query: 260 VVYYKPRT--SQFIISLNKYLEAVNNKFAV--GMRYKMRFEGEDSPERRFSGTVVGVEDF 315
++Y PR S+F+I L+KY AV N V GMR++M+FE E+S RR +GT+VG D
Sbjct: 267 TIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSGDL 326
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLA-KNKRP 370
P W +S WRSLKV+WDEPA+ + R+S WEIEP ++TP LV P ++KRP
Sbjct: 327 DPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEP---ASTPYLVCSPSFTFRSKRP 381
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKV G +VGR+LDLT L YD L EL MF ++GQL R+ W++V+ D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I S ++ M+
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPSELSHMN 795
>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
Length = 798
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 185/379 (48%), Positives = 241/379 (63%), Gaps = 42/379 (11%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW CAG L +PK+G V YFPQGH+EQ AS++ I F LP +I CRVV
Sbjct: 52 IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTFDLPPQIFCRVV 110
Query: 78 NIHLMAEQETDEVYAQITLLPEP---------------------SQNEPTTPDPCPADSP 116
N+ L+A +E DEVY Q+TLLP+P PT P
Sbjct: 111 NVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTP------ 164
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+
Sbjct: 165 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 220
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE GEL +G+R R ++ +P S+I
Sbjct: 221 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSII 280
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR 294
+Q+ + VL+ A++AVAT++MF V+Y PR S +F+I KY++++ N ++G R+KMR
Sbjct: 281 GNQNSYPNVLSLAANAVATKSMFHVFYSPRASHAEFVIPYQKYVKSITNPISIGTRFKMR 340
Query: 295 FEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
++ +DSPERR SG V G+ D P+ W +SKWR L V+WD+ +RVSPWEI+P V+
Sbjct: 341 YDMDDSPERRSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVS 400
Query: 354 SATPNLVQPVLAKNKRPRL 372
P L+ PRL
Sbjct: 401 -------LPPLSIQSSPRL 412
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
+ RS TKV QG VGRA+DL+ L GY L ELE +F ++G L K W+I+YTD E
Sbjct: 667 SGKRSCTKVHKQGNLVGRAIDLSRLNGYGDLFSELERLFGMEGLLRDPDKGWQILYTDSE 726
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
DMM+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 727 NDMMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 761
>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 546
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 288/528 (54%), Gaps = 84/528 (15%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT--GWSTF 195
+ +++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+ MF V YKPR M+FEG+D E+R+ GT++GV D
Sbjct: 259 KCMFNVVYKPR--------------------------MQFEGKDFSEKRYDGTIIGVNDM 292
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 293 SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH------ 344
Query: 376 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 435
W + ++ SN + +
Sbjct: 345 -----------------------------------------WLQLNEIGATLSNLWTCQE 363
Query: 436 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRK 494
+ SP + + + AI+D+K +S HS + P+ + N+D +++ +
Sbjct: 364 IGQRSMNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDIT 421
Query: 495 TETGTSCRLFGIELIN-HATSSAPSEKVPVSSLTTEGHIISTISAAAD 541
TE TSC LFG++L H A S V ++++ +I + D
Sbjct: 422 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFD 469
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 79/105 (75%)
Query: 567 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 626
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 422 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 481
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 482 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 526
>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
Length = 733
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 188/387 (48%), Positives = 244/387 (63%), Gaps = 42/387 (10%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + F L ILCRV+N
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 79 IHLMAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPAD 114
+HL+A +E DEVY Q+TL P P S PT P
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTP---- 166
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWR
Sbjct: 167 ------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
F+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 292
++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R+K
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFK 340
Query: 293 MRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
MRFE +DSPERRF+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+P
Sbjct: 341 MRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPS 398
Query: 352 VASATPNLVQPVLAKNKRPRLSMEVPP 378
V + P L + K+ R S++ P
Sbjct: 399 V--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 602 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 661
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 662 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 696
>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
Length = 802
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 188/387 (48%), Positives = 244/387 (63%), Gaps = 42/387 (10%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + F L ILCRV+N
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 79 IHLMAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPAD 114
+HL+A +E DEVY Q+TL P P S PT P
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTP---- 166
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWR
Sbjct: 167 ------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
F+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 292
++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R+K
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFK 340
Query: 293 MRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
MRFE +DSPERRF+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+P
Sbjct: 341 MRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPS 398
Query: 352 VASATPNLVQPVLAKNKRPRLSMEVPP 378
V + P L + K+ R S++ P
Sbjct: 399 V--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 671 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 730
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 731 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 765
>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 479
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 276/494 (55%), Gaps = 83/494 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT--GWSTF 195
+ +++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+ MF V YKPR M+FEG+D E+R+ GT++GV D
Sbjct: 259 KCMFNVVYKPR--------------------------MQFEGKDFSEKRYDGTIIGVNDM 292
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 293 SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH------ 344
Query: 376 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 435
W + ++ SN + +
Sbjct: 345 -----------------------------------------WLQLNEIGATLSNLWTCQE 363
Query: 436 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRK 494
+ SP + + + AI+D+K +S HS + P+ + N+D +++ +
Sbjct: 364 IGQRSMNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDIT 421
Query: 495 TETGTSCRLFGIEL 508
TE TSC LFG++L
Sbjct: 422 TEATTSCLLFGVDL 435
>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
Length = 733
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 187/387 (48%), Positives = 244/387 (63%), Gaps = 42/387 (10%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + F L ILCRV+N
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 79 IHLMAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPAD 114
+HL+A +E DEVY Q+TL P P S PT P
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTKSTP---- 166
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWR
Sbjct: 167 ------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
F+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 292
++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R+K
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFK 340
Query: 293 MRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
MRFE +DSPER+F+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+P
Sbjct: 341 MRFEMDDSPERKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPS 398
Query: 352 VASATPNLVQPVLAKNKRPRLSMEVPP 378
V + P L + K+ R S++ P
Sbjct: 399 V--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 602 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 661
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 662 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 696
>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 793
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/385 (48%), Positives = 241/385 (62%), Gaps = 38/385 (9%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ AS + +P + L +I CRVVN
Sbjct: 48 YIELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPMEMPTYDLQPQIFCRVVN 106
Query: 79 IHLMAEQETDEVYAQITLLP---------------------EPSQNEPTTPDPCPADSPR 117
I L+A +E DEVY Q+TLLP E ++ PT P
Sbjct: 107 IQLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTP------- 159
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
H F K LTASDTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EW+F+H
Sbjct: 160 ---HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRH 216
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
I+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S++
Sbjct: 217 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVG 276
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRF 295
SQS + L++ ++A++ ++MF V+Y PR S F + KY++++ N +G R+KM+F
Sbjct: 277 SQSYYPNFLSSVANAISAKSMFHVFYSPRASHADFAVPYQKYIKSIKNPVTIGTRFKMKF 336
Query: 296 EGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
E ++SPERR SG V G+ D P+ W SKWR L V+WDE I DRVSPWE++P A
Sbjct: 337 EMDESPERRCTSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDP-SA 395
Query: 354 SATPNLVQPV-LAKNKRPRLSMEVP 377
S P +Q K RP L P
Sbjct: 396 SLPPLSIQSSRRLKKLRPGLLAAAP 420
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
+S RS TKV QG VGRA+DL+ L Y+ L+ ELE +F ++G L K W I+YTD E
Sbjct: 661 SSKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLIELERLFSMEGLLIDPNKGWRILYTDSE 720
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 721 NDIMVVGDDPWHEFCDVVSKIHIHTQEEVEKMTIG 755
>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 886
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/355 (52%), Positives = 250/355 (70%), Gaps = 10/355 (2%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSLESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTN 127
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 128 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGED 299
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPRPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEE 306
Query: 300 SPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
S RR+ GT+ + D S W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 307 SSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 361
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 765 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 824
Query: 649 NMVKRIFICSSQDVKKMSPG 668
N V I I S QDV++M G
Sbjct: 825 NSVWCIKILSPQDVQQMVRG 844
>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
Length = 837
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/378 (47%), Positives = 245/378 (64%), Gaps = 30/378 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR-----LPSKILCR 75
ELW+ACAGP++ +P++G V YFPQGH+EQ P FR +P + CR
Sbjct: 33 ELWRACAGPVISLPRKGTIVVYFPQGHLEQ------------APKFRAFAHDIPPHLFCR 80
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV--------HSFSKVL 127
V+N++L AE TDEVYAQ++L+PEP + + + ++ H F K L
Sbjct: 81 VLNVNLHAEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEIEELSTATPHMFCKTL 140
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C P LD Q P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 141 TASDTSTHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 200
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS+FV K+LV+GD +FLRGENGEL +G+R AR + +P S++ SQ+++L LA
Sbjct: 201 LTTGWSSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALA 260
Query: 248 TASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
S AV+T++MF VYY PR S +FII K+ +++N ++G R+KMR+E ED+ E+R
Sbjct: 261 AVSTAVSTKSMFHVYYNPRASPAEFIIPYRKFSKSINQPLSIGTRFKMRYETEDATEQRP 320
Query: 306 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+G + G+ D P W SKWR L V+WDE A D+VSPWEIEP + + P+
Sbjct: 321 TGLITGIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEP--SGSLSGFSSPLT 378
Query: 365 AKNKRPRLSMEVPPLDLP 382
+K+PR+S+ D P
Sbjct: 379 PGSKKPRISLPSIKADFP 396
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 99/173 (57%), Gaps = 17/173 (9%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
GTSCRLFG L A + + PV+S + + + T A+S KQ
Sbjct: 647 GTSCRLFGFPLTKEAPVANTVDPTPVASQSAKDLDLKTCLPTANS---------MIPGKQ 697
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
+V + S T+ RS TKV QG VGRA+DL+ L GYD LI ELE +F+++G
Sbjct: 698 LHAEV-------QSSTKTAGRSCTKVHRQGNLVGRAIDLSKLDGYDDLITELERLFNMEG 750
Query: 618 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
L+ K W++VYTDDE DMMLVGDDPW EFCN+V +I I + +V+ M PG
Sbjct: 751 LLNDPGKGWQVVYTDDEDDMMLVGDDPWQEFCNIVSKILIYTHDEVELMVPGG 803
>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
Length = 713
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/384 (47%), Positives = 244/384 (63%), Gaps = 17/384 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQL AS++ ++ +P F L +I C+VV
Sbjct: 38 IYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQL-ASSSPFSHRDMPNFDLHPQIFCKVV 96
Query: 78 NIHLMAEQETDEVYAQITLLPEPS-----------QNEPTTPDPCPADSPRPKVHSFSKV 126
N+ L+A +E DEVY ++TLLP+P Q + A + H F K
Sbjct: 97 NVQLLANRENDEVYTRLTLLPQPEVVGQDLEGKELQELGVDGEGDDASPTKSTPHMFCKT 156
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A +C P LD Q P+QEL+AKDLHG EWRF+HI+RGQPRRH
Sbjct: 157 LTASDTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQPRRH 216
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWS FV+ K LV+GD +FLRGE GEL +G+R AR ++ +P SV Q+ L
Sbjct: 217 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSLPSAL 276
Query: 247 ATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
+ S+A++T+++F V Y PR + F++ KY++++ N +G R+KMRFE +DSPERR
Sbjct: 277 SLVSNAISTKSVFTVSYSPRATHAVFVVPYQKYIKSITNAVCIGTRFKMRFEMDDSPERR 336
Query: 305 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
SG V G D P+ W +SKWR L V+WDE +RVSPWEI+ V + P L+
Sbjct: 337 CSGVVTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASV--SLPPLIIQS 394
Query: 364 LAKNKRPRLSMEVPPLDLPSAASA 387
+ K+ R ++ P D P A
Sbjct: 395 SPRLKKLRTGLQAAPPDKPIAGGG 418
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDE 633
TS RS TKV QG VGRA+DL+ L GY L++ELE +F ++G L W I+YTD E
Sbjct: 592 TSKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLNELERLFSMEGLLRNPEEGWRILYTDSE 651
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
D+M+VGDDPW EFCN+ +I I + ++V+KM+
Sbjct: 652 NDVMVVGDDPWLEFCNVATKIHIYTQEEVEKMT 684
>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
Length = 911
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 247/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNY-FCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD NQ P QEL+A DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 266 TNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + + RVS WEIEP + P P KRP
Sbjct: 326 ISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLKRP 383
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 590 VGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEF 647
VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 790 VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEF 849
Query: 648 CNMVKRIFICSSQDVKKMS-PGSKL 671
N V I I S ++V++M PG +L
Sbjct: 850 VNSVSCIKILSPEEVQQMGKPGIQL 874
>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
Length = 904
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 250/360 (69%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D + W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 ISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 606 IDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
++EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF N V I I S Q+V+
Sbjct: 800 MEELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQ 859
Query: 664 KM 665
+M
Sbjct: 860 QM 861
>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
Length = 917
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 250/360 (69%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D + W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 ISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 798 GRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFV 857
Query: 649 NMVKRIFICSSQDVKKM 665
N V I I S Q+V++M
Sbjct: 858 NSVSCIKILSPQEVQQM 874
>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
Length = 917
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 250/360 (69%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D + W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 ISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 798 GRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFV 857
Query: 649 NMVKRIFICSSQDVKKM 665
N V I I S Q+V++M
Sbjct: 858 NSVSCIKILSPQEVQQM 874
>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
Length = 838
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 242/345 (70%), Gaps = 13/345 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP++++C++
Sbjct: 22 LNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTNKEIDAHIPSYPGLPAQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P +Q + D C PA+ P + F K LTASD
Sbjct: 82 HNVTMHADNETDEVYAQMTLQPLSAQEQK---DVCLLPAELGMPSKQPTNYFCKTLTASD 138
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+H+FRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRHVFRGQPKRHLLTTG 198
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+H
Sbjct: 199 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258
Query: 252 AVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 308
A AT + F ++Y PR S F+I L KY +AV + + +VGMR++M FE E+S RR+ GT
Sbjct: 259 AAATNSRFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 318
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
+ G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 363
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 535 TISAAADSDGKSDIAKEFKEKKQEQVQVSPK-ESQSKQSCLTSNRSRTKVQMQGVAVGRA 593
T S AD A F+ VQ S + S + Q ++ R+ KV G VGR+
Sbjct: 668 TTSVVADVSSLPSGASGFQNSPYGYVQDSSELVSSAGQVDPSTPRTFIKVYKSGY-VGRS 726
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 651
LD+T + Y L EL +MF I+G L R+ W++V+ D E D++L+GDDPW F N V
Sbjct: 727 LDITRISSYHELRQELAQMFGIEGLLEDPQRSGWQLVFVDRENDVLLLGDDPWEAFVNNV 786
Query: 652 KRIFICSSQDVKKM 665
I I S +DV+K+
Sbjct: 787 WYIKILSPEDVQKL 800
>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 248/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNY-FCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 ISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G VGR LD+T Y L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 780 VKVYKSGT-VGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 838
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 671
VGDDPW EF N V I I S Q+V++M PG +L
Sbjct: 839 VGDDPWQEFVNSVSCIKILSPQEVQQMGKPGIEL 872
>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
Length = 895
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/355 (52%), Positives = 250/355 (70%), Gaps = 12/355 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSPESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET+EVYAQ+TL P Q EP P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKEPFLPIELGAGSKQP-T 126
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 127 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEG 297
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 306
Query: 298 EDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
E+S RR+ GT+ G+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 307 EESSVRRYMGTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPL 361
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G ++GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 765 VKVYKSG-SLGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 823
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
VGDDPW EF N V I I S QDV++M G
Sbjct: 824 VGDDPWQEFVNSVWCIKILSPQDVQQMVRG 853
>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
Length = 775
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/259 (69%), Positives = 208/259 (80%), Gaps = 5/259 (1%)
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
PR SF K LTASDTSTHGGFSVLR+HA ECLPPLDMNQ P QELVAKDLHG W F
Sbjct: 11 PRSGACSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHF 70
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
+HIFRGQPRRHLLTTGWS FV+SKRL+AGD F+FLRG+NGEL VGVR RQQ+++ SSV
Sbjct: 71 RHIFRGQPRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVSSSV 130
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKM 293
ISS SMHLGV+ATASHAV+T TMF VYYKPRT S FII KY+EA+NN F+VGMR+KM
Sbjct: 131 ISSHSMHLGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAMNNNFSVGMRFKM 190
Query: 294 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
RFEGE++PE+RF GT++G D P W SKWRSLKVQWDE + + RP+RVSPWEIE +
Sbjct: 191 RFEGEEAPEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIE-LI 249
Query: 353 ASATPNLVQPVLAKNKRPR 371
A+A PV ++NKRPR
Sbjct: 250 ATAAALSPLPV-SRNKRPR 267
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 23/212 (10%)
Query: 489 VETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIST------ISAAADS 542
E G + +C+LFG +L++++ S + V + S+T E + +S A+
Sbjct: 537 TEMGPTAPSANNCKLFGFQLVDNSVVSESTTPVIIGSVTGEDMQAAVHAPRENLSQPAEL 596
Query: 543 DGKSDIAKEFKE-------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 595
D +S+ +K K ++++ Q S KE+Q + S RS TKVQ QG A GRA+D
Sbjct: 597 DQQSEPSKTSKSDPPTSSCEREKWSQRSSKETQFRAES-NSFRSHTKVQKQGSAFGRAVD 655
Query: 596 LTTLVGYDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWH--------E 646
L GY I ELE+MF+I+G+L R W +VYTD+EGDMMLVGD PW E
Sbjct: 656 LMKFEGYPEFIHELEQMFNIEGELEDPRKGWLVVYTDNEGDMMLVGDHPWQEFLHPINRE 715
Query: 647 FCNMVKRIFICSSQDVKKMSPGSKLPMFSIEG 678
FC + +I+I + ++V+KM+P L IEG
Sbjct: 716 FCRIAHKIYIYTREEVEKMTPWQTLDGKKIEG 747
>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
Length = 897
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/355 (52%), Positives = 251/355 (70%), Gaps = 12/355 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSPESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET+EVYAQ+TL P Q +P P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKDPFLPIELGAGSKQP-T 126
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 127 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R +R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEG 297
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 306
Query: 298 EDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
E+S RR+ GT+ G+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 307 EESSVRRYMGTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPL 361
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G ++GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 766 VKVYKSG-SLGRSLDITRFGSYYELRVELERLFGLEGQLEDPARSGWQLVFVDRENDVLL 824
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGFGLFLG 684
+GDDPW EF N V I I S QD+++M+ G + S G + G
Sbjct: 825 LGDDPWQEFVNSVGCIKILSPQDLQQMARGGGGDLLSAPGARMLQG 870
>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
Length = 914
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 248/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD NQ P QEL+AKDLHG +W+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 266 TNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + + RVS WEIEP + P P KRP
Sbjct: 326 ISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLKRP 383
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 785 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 843
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 671
VGDDPW EF N V I I S ++V++M PG +L
Sbjct: 844 VGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQL 877
>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
Length = 919
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 249/360 (69%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 28 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 88 HNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 207 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 266
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 267 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 326
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 327 ISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 384
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 799 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 858
Query: 649 NMVKRIFICSSQDVKKM 665
+ V I I S Q+V++M
Sbjct: 859 STVSCIKILSPQEVQQM 875
>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
Length = 905
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 248/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 18 LNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 77
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 78 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQP-TNYFCKTLTASDTST 136
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD NQ P QEL+AKDLHG +W+F+HIFRGQP+RHLLTTGWS
Sbjct: 137 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTGWSV 196
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 197 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 256
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 257 TNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 316
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + + RVS WEIEP + P P KRP
Sbjct: 317 ISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLKRP 374
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 776 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 834
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 671
VGDDPW EF N V I I S ++V++M PG +L
Sbjct: 835 VGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQL 868
>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 836
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 240/340 (70%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + T P P R + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 261 NSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 320
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 321 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 576 SNRSRTKVQMQGV-AVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTD 631
SN +RT V++ +VGR+LD++ Y L +EL +MF I+GQL R+ W++V+ D
Sbjct: 706 SNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVD 765
Query: 632 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
E D++L+GDDPW F N V I I S +D +K+
Sbjct: 766 RENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKL 799
>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
Length = 925
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 247/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 41 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPSYPNLPPQLICQL 100
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ET+EVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 101 HNVTMQADAETEEVYAQMTLQPLNPQELKDPYLPAELGLVSKQPTNY-FCKTLTASDTST 159
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+A DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 160 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKRHLLTTGWSV 219
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 220 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 279
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S +F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 280 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 339
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 340 ISDLDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPTYTSPFPLRLKRP 397
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 804 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFA 863
Query: 649 NMVKRIFICSSQDVKKM 665
+ V I I S Q+V++M
Sbjct: 864 STVSCIKILSPQEVQQM 880
>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
Length = 891
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 195/381 (51%), Positives = 253/381 (66%), Gaps = 21/381 (5%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ P + F K LTAS
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSPQEQK---DVCLLPAELGIPSKQPTNYFCKTLTASG 138
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 198
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+H
Sbjct: 199 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258
Query: 252 AVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 308
A AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT
Sbjct: 259 AAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 318
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+ G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P +
Sbjct: 319 ITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFSLRL 376
Query: 368 KRPRLSMEVPPLDLPSAASAP 388
KRP P LPS P
Sbjct: 377 KRPW------PSGLPSLTGFP 391
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 633
+NR KVQ G + GR+LD++ Y L EL MF ++G L R+ W++V D E
Sbjct: 755 TNRIFVKVQKSG-SFGRSLDISKFSSYHELRSELARMFGLEGLLEDPERSGWQLVIVDRE 813
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GDDPW EF N V I I S +V++M
Sbjct: 814 NDVLLLGDDPWQEFVNNVWYIKILSPYEVQQM 845
>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 232/347 (66%), Gaps = 16/347 (4%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL + K+G V YFPQGH+EQ+ AS + IP + L +I CRVVN
Sbjct: 52 YLELWHACAGPLTSLLKKGNVVVYFPQGHLEQV-ASFSPFTPLEIPTYDLQPQIFCRVVN 110
Query: 79 IHLMAEQETDEVYAQITLLPEPSQN----------EPTTPDPCPADSP-RPKVHSFSKVL 127
+ L+A +E DEVY Q+TLLP+P E + SP + H F K L
Sbjct: 111 VQLLANKENDEVYTQVTLLPQPELEGMYSEGKELEELGAEEDGDERSPTKSTPHMFCKTL 170
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 230
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV+ K LV+GD +FLRGENGEL +G+R R ++ +P SVI SQ+ + VL+
Sbjct: 231 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSNVLS 290
Query: 248 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+ ++A++T++ F V+Y PR S F++ KY++++ N ++G R+KMRFE ++S ERR
Sbjct: 291 SVANAISTKSKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRC 350
Query: 306 -SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
SGT++ D P+ W SKWR L V+WDE DRVSPWEI+P
Sbjct: 351 SSGTLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDP 397
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 16/158 (10%)
Query: 520 KVPVSSLTTEGHIISTISAAADS--------DGKSDIAKEFKEKKQEQVQVSPKESQSKQ 571
+V S L E + IS+AA+ GK + K F + ++ +K+
Sbjct: 604 EVGRSDLPNEHKLQDNISSAANMGVSNDNNVQGKVNACKLFGFSLSGETTAQNLQNSAKR 663
Query: 572 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYT 630
SC TKV QG VGRA+DL+ L GY+ L+ ELE +F ++G L K W I+YT
Sbjct: 664 SC-------TKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDKGWRILYT 716
Query: 631 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
D E D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 717 DSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIG 754
>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
Length = 889
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 248/363 (68%), Gaps = 15/363 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G V YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSGVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P +Q + D C PA+ P + F K LTASD
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSAQEQK---DVCLLPAELGIPSKQPTNYFCKTLTASD 138
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 198
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+H
Sbjct: 199 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258
Query: 252 AVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 308
A AT + F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT
Sbjct: 259 AAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYMGT 318
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+ G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P +
Sbjct: 319 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSLRL 376
Query: 368 KRP 370
KRP
Sbjct: 377 KRP 379
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+NR+ KV G + GR+LD++ Y L EL MF ++G L R+ W++V+ D E
Sbjct: 753 TNRTFVKVHKSG-SFGRSLDISKFSNYHELRSELAHMFGLEGLLEDPERSGWQLVFVDRE 811
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP-GSKLP 672
D++L+GDDPW EF N V I I S +V++M G LP
Sbjct: 812 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKDGLDLP 851
>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
Length = 844
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 181/340 (53%), Positives = 241/340 (70%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+EL+ IP + LP +++C +
Sbjct: 20 LNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKELDIHIPNYPNLPPQLICPL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAST 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F+V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 GDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 580 RTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDM 636
RT V++ + ++GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D+
Sbjct: 717 RTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGLLEDPQRSGWQLVFVDRENDV 776
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
+L+GDDPW EF N V I I S +DV+K+
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
Length = 884
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 245/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G R YFPQGH EQ+ ASTN+E+N +IP + LP++++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKEVNAQIPSYPSLPAQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKAAYLPADMGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRTS--QFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S +F+I L KYL+AV + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRMMFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D W +S+WRS+KV WDE R RVS WEIEP + P P + KRP
Sbjct: 320 SDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPL--TTFPTYPSPFPLRLKRP 376
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E D
Sbjct: 751 RTFVKVYKSG-SFGRSLDITKFSSYNELRSELSRMFGLEGQLEDPLRSGWQLVFIDREND 809
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++L+GD PW EF N V I I S Q+V++M
Sbjct: 810 VLLLGDGPWPEFVNSVWYIKILSPQEVQQM 839
>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
Length = 915
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 247/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVLYFPQGHSEQVSASTNKEIESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEV AQ+TL P Q +P P + +P + F K LTASDTST
Sbjct: 87 HNVIMHADAETDEVCAQMTLQPLSPQELKDPFLPAELGTANKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
F+++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FISAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 ISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTIPMYSSPFPMRLKRP 383
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G AVGR LD+T Y L EL +F ++GQL R+ W++V+ D E D++L
Sbjct: 786 VKVYKSG-AVGRLLDITRFSSYHELRSELGHLFGLEGQLEDPVRSGWQLVFVDRENDVLL 844
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM 665
VGDDPW EF N V I I S Q+V++M
Sbjct: 845 VGDDPWQEFVNSVSCIKILSPQEVQQM 871
>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
Length = 844
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/340 (52%), Positives = 242/340 (71%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDIHIPNYPNLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAST 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F+V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 GDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 580 RTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDM 636
RT V++ + ++GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D+
Sbjct: 717 RTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGFLENPQRSGWQLVFVDRENDV 776
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
+L+GDDPW EF N V I I S +DV+K+
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 916
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/360 (52%), Positives = 248/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTST
Sbjct: 80 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTST 138
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA A
Sbjct: 199 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 259 TNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 319 ISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 454 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 504
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 658 QFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 717
Query: 505 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 562
G+ + S + S +P SS + T G S + + F + + QV
Sbjct: 718 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQV 777
Query: 563 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 620
+P R+ KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 778 NPP-----------TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDP 825
Query: 621 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 826 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 902
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/360 (52%), Positives = 248/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTST
Sbjct: 82 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTST 140
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA A
Sbjct: 201 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 260
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 261 TNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 321 ISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 454 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 504
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 644 QFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 703
Query: 505 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 562
G+ + S + S +P SS + T G S + + F + + QV
Sbjct: 704 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQV 763
Query: 563 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 620
+P R+ KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 764 NPP-----------TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDP 811
Query: 621 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 812 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 856
>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
Length = 396
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 248/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 6 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 65
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 66 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQP-TNYFCKTLTASDTST 124
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 125 HGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 184
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 185 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 244
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 245 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 304
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 305 ISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 362
>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
Length = 913
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 249/360 (69%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 ICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L EL +F ++GQL R+ W++V+ + E D++LVGDDPW EF
Sbjct: 792 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVNREEDVLLVGDDPWQEFV 851
Query: 649 NMVKRIFICSSQDVKKM 665
+ V I I S Q+V++M
Sbjct: 852 STVSCIKILSPQEVQQM 868
>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 895
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 247/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W++S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 SDLDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 761 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 819
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 820 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 850
>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
Length = 916
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/360 (52%), Positives = 248/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTST
Sbjct: 80 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTST 138
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA A
Sbjct: 199 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 259 TNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 319 ISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 454 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 504
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 658 QFVLSQGENIGTTPANISQNAFTLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 717
Query: 505 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 562
G+ + S + S +P SS + T G S + + F + QV
Sbjct: 718 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLHSPENTGQV 777
Query: 563 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 620
+P + + KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 778 NPPTT-----------TFVKVYKSG-SFGRSLDISKFSRYHQLRSELAHMFGLEGELEDP 825
Query: 621 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 826 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 854
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 239/340 (70%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A ETDEVYAQ+TL P +Q + T P P R + F K LTASDTSTH
Sbjct: 81 HNVTMHAVVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 261 NSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 320
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 321 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 576 SNRSRTKVQMQGV-AVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTD 631
SN +RT V++ +VGR+LD++ Y L +EL +MF I+GQL R+ W++V+ D
Sbjct: 724 SNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVD 783
Query: 632 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
E D++L+GDDPW F N V I I S +D +K+
Sbjct: 784 RENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKL 817
>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 231/350 (66%), Gaps = 22/350 (6%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + IP + L +I CRVVN
Sbjct: 51 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASFSPFTPLEIPTYDLQPQIFCRVVN 109
Query: 79 IHLMAEQETDEVYAQITLLPEP--------------SQNEPTTPDPCPADSPRPKVHSFS 124
+ L+A +E DEVY Q+TLLP+ E D P S H F
Sbjct: 110 VQLLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKS---TPHMFC 166
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLH EW+F+HI+RGQPR
Sbjct: 167 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPR 226
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R R ++ +P SVI SQ+ +
Sbjct: 227 RHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYPN 286
Query: 245 VLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
VL++ ++A++T++ F V+Y PR SQ F++ KY++++ N ++G R+KMRFE ++S E
Sbjct: 287 VLSSVANAISTKSKFHVFYSPRASQADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQE 346
Query: 303 RR-FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
RR SG ++G D P+ W SKWR L V+WDE DRVSPWEI+P
Sbjct: 347 RRCCSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDP 396
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 8/132 (6%)
Query: 536 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 595
+S + GK + K F + ++ +K+SC TKV QG VGRA+D
Sbjct: 628 VSIDNNVQGKVNACKLFGFSLSGETTTQNLQNSAKRSC-------TKVHKQGSLVGRAID 680
Query: 596 LTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRI 654
L+ L GY+ L+ ELE +F ++G L K W+I+YTD E D+M+VGDDPWHEFC++V +I
Sbjct: 681 LSRLSGYNDLLSELERLFSMEGLLKDPDKGWKILYTDSENDIMVVGDDPWHEFCDVVSKI 740
Query: 655 FICSSQDVKKMS 666
I + ++V+KM+
Sbjct: 741 HIYTQEEVEKMT 752
>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
Length = 881
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/357 (52%), Positives = 250/357 (70%), Gaps = 12/357 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 1 MSEPSLESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 60
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP P A S +P
Sbjct: 61 PNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTN 120
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 121 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFR 179
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 180 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 239
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEG 297
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE
Sbjct: 240 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 299
Query: 298 EDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
E+S RR+ GT+ + D S W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 300 EESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 356
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 760 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 819
Query: 649 NMVKRIFICSSQDVKKMSPG 668
N V I I S QDV++M G
Sbjct: 820 NSVWCIKILSPQDVQQMVRG 839
>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 781
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/357 (52%), Positives = 250/357 (70%), Gaps = 12/357 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSLESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTN 127
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 128 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEG 297
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 306
Query: 298 EDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
E+S RR+ GT+ + D S W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 307 EESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 363
>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
Length = 820
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/340 (52%), Positives = 240/340 (70%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTYIPVELGIPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAST 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFTIFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 GDLDPIRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 468 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 527
A+S TP+P K DT +EQ +C L G NHA A + P L
Sbjct: 617 ANSVSLTPYPGK---DTAVEQ----------ENCSLDGQ---NHALFGANID--PGLLLP 658
Query: 528 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK--ESQSKQSCLTSNRSRTKVQM 585
T I T S AD A F+ +Q S + S ++ T+NR+ KV
Sbjct: 659 TTLSSIGTSSVNADVSSMPLGASGFQSSLYGCMQDSSELLHSAAQVDPPTANRTFVKVYK 718
Query: 586 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDP 643
G +VGR+LD++ Y+ L +EL +MF I+G L R+ W++V+ D E D++L+GD P
Sbjct: 719 SG-SVGRSLDISRFSSYNELREELGQMFGIEGLLKDPQRSGWQLVFVDREDDVLLLGDGP 777
Query: 644 WHEFCNMVKRIFICSSQDVKKM 665
W F N V I I S +DV K+
Sbjct: 778 WEAFVNNVWYIKILSPEDVLKL 799
>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
gi|219886495|gb|ACL53622.1| unknown [Zea mays]
gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 888
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/357 (52%), Positives = 250/357 (70%), Gaps = 12/357 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSLESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTN 127
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 128 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEG 297
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 306
Query: 298 EDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
E+S RR+ GT+ + D S W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 307 EESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 363
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 767 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 826
Query: 649 NMVKRIFICSSQDVKKMSPG 668
N V I I S QDV++M G
Sbjct: 827 NSVWCIKILSPQDVQQMVRG 846
>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
Length = 908
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 248/359 (69%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 CDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
N++ KV G + GR+LD+T Y+ L EL MF ++G+L R+ W++V+ D E
Sbjct: 774 NKTFVKVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDREN 832
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S ++V++M
Sbjct: 833 DVLLLGDGPWPEFVNSVWCIKILSPEEVQQM 863
>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
Length = 895
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/359 (52%), Positives = 244/359 (67%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKEVDAHIPNHPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P SP + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R RQQ+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAVNNK-FAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY++AV + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS WE+EP + P P + KRP
Sbjct: 320 SDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPL--TTFPMYPSPFQLRLKRP 376
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
NR+ KV G + GR+LD+T Y L +EL MF ++G+L R+ W++V+ D E
Sbjct: 761 NRNFVKVYKSG-SFGRSLDITKFSSYQELRNELARMFGLEGKLDDPVRSGWQLVFVDREN 819
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GDDPW EF N V I I S Q+V++M
Sbjct: 820 DVLLLGDDPWPEFVNSVWCIKILSPQEVQQM 850
>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
Length = 478
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 246/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGTPNKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 239/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMDLGMPSKQPTNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 258
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 259 NSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGI 318
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 646
+VGR+LD++ Y L EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 728 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 787
Query: 647 FCNMVKRIFICSSQDVKKM 665
F N V I I S +DV K+
Sbjct: 788 FVNNVWYIKILSPEDVLKL 806
>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 897
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 184/341 (53%), Positives = 240/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P QNE P S +P + F K LTASDTST
Sbjct: 80 HNMTMHADVETDEVYAQMTLQPLNPQEQNEAYLPAELGTASKQP-TNYFCKTLTASDTST 138
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA A
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 IGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 763 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 821
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 822 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 852
>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
Length = 808
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 180/378 (47%), Positives = 242/378 (64%), Gaps = 17/378 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN-QELNQRIPLFRLPSKILCRV 76
+Y ELW ACAGPL +PK+G V YFPQGHME+ +S+ + +P F L +I CRV
Sbjct: 58 IYMELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDLPTFGLHPQIFCRV 117
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKV-------HSFSK 125
++ L+A +E DEVY Q++LLP P E + D R V H F K
Sbjct: 118 DDVQLLANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCK 177
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A +C PPLD + P+QEL+AKDLHG EW+F+HI+RGQPRR
Sbjct: 178 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 237
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV+ K LV+GD +FLRGE G+L +G+R AR ++++P S+I SQ V
Sbjct: 238 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQYSGSDV 297
Query: 246 LATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
L+ + AV+T++ F V+Y PR S F++ KY++++ + VG R+KMRF+ +DSPER
Sbjct: 298 LSAVASAVSTKSAFNVFYSPRASHADFVVPYQKYVKSIKTRIPVGTRFKMRFDLDDSPER 357
Query: 304 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
R+SG V G+ D P W +SKWR L V+WDE +RVSPWEI+ V + P L
Sbjct: 358 RYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSV--SLPPLSIQ 415
Query: 363 VLAKNKRPRLSMEVPPLD 380
+ K+ R S + P+D
Sbjct: 416 SSPRLKKLRTSQQAQPVD 433
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 565 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 624
KE + S + RS TKV Q +GR DL+ L G+ L+ ELE + +I+ L K
Sbjct: 667 KEPSAPNSQSSGKRSCTKVHKQRGLIGRPFDLSGLNGHADLLVELERLLNIEDLLSDPKK 726
Query: 625 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
W I+YTD + D+M+VG DPWHEFC +V +I I + ++V+KM+
Sbjct: 727 GWRILYTDSDNDLMVVGGDPWHEFCEVVSKIHIYTQEEVEKMT 769
>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 398
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 182/344 (52%), Positives = 233/344 (67%), Gaps = 6/344 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D+L ELW ACAGPL +P V Y+PQGH+EQ+ A+ + +++ LP+ +LC+
Sbjct: 2 DELDCELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAADVYQASKQ--FSNLPAHLLCK 59
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
+ I L A+ TDEV+AQ+ L P+ P + + V SF K LTASDTSTH
Sbjct: 60 ISKIELQADPHTDEVFAQMDLTPQYETEFTKEMKDAPPPTMQKNVRSFCKTLTASDTSTH 119
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A +CLP LD + + P QELVAKDLHG EW F+HI+RG PRRHLLTTGWS F
Sbjct: 120 GGFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTGWSVF 179
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRLVAGDT +FLRGENG+L VGVR ++Q S+ S+ ++HLGVLA ASHA
Sbjct: 180 VSQKRLVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAAASHAATE 239
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F V Y PRT S+F+I +KYL+ N VG R+KM+FE ++S ERR+SGT+V V
Sbjct: 240 RLRFSVIYNPRTSPSEFVIPYHKYLKTKENNLTVGSRFKMKFESDESTERRYSGTIVEVS 299
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 356
D P W +S WRS+KV+WDE AS R +RVSPWEIEPFV +T
Sbjct: 300 DADPLKWPNSAWRSMKVEWDESAS-ERHERVSPWEIEPFVPIST 342
>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
Length = 868
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 250/364 (68%), Gaps = 17/364 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+N IP + LP +++C++
Sbjct: 9 LNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQL 68
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PAD----SPRPKVHSFSKVLTAS 130
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ S +P + F K LTAS
Sbjct: 69 HNVTMDADVETDEVYAQMTLQPLTPQEQK---DVCLLPAELGTLSKQPSNY-FCKTLTAS 124
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + PPLD +Q P QEL+ KDLHG EW+F+HIFRGQP+RHLLTT
Sbjct: 125 DTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLTT 184
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRLVAGD+ +F+ EN +L +G+R R Q+ +PSSV+SS SMH+G+LA A+
Sbjct: 185 GWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAAA 244
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSG 307
HA AT + F +++ PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ G
Sbjct: 245 HAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSIRRYMG 304
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
T+ G+ D P W +S W+S+KV WDE + R RVS WEIEP + P P +
Sbjct: 305 TITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSLR 362
Query: 367 NKRP 370
KRP
Sbjct: 363 LKRP 366
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 646
+ GR+LD++ Y+ L EL MF ++G L R+ W++V+ D E D++L+GDDPWHE
Sbjct: 744 SFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHE 803
Query: 647 FCNMVKRIFICSSQDVKKMSP-GSKLP 672
F N V I I S +V++M G LP
Sbjct: 804 FVNSVWYIKILSPLEVQQMGKQGLDLP 830
>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
Length = 881
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 250/364 (68%), Gaps = 17/364 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+N IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PAD----SPRPKVHSFSKVLTAS 130
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ S +P + F K LTAS
Sbjct: 82 HNVTMDADVETDEVYAQMTLQPLTPQEQK---DVCLLPAELGTLSKQPSNY-FCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + PPLD +Q P QEL+ KDLHG EW+F+HIFRGQP+RHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRLVAGD+ +F+ EN +L +G+R R Q+ +PSSV+SS SMH+G+LA A+
Sbjct: 198 GWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAAA 257
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSG 307
HA AT + F +++ PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ G
Sbjct: 258 HAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFQMLFETEESSIRRYMG 317
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
T+ G+ D P W +S W+S+KV WDE + R RVS WEIEP + P P +
Sbjct: 318 TITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSLR 375
Query: 367 NKRP 370
KRP
Sbjct: 376 LKRP 379
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 646
+ GR+LD++ Y+ L EL MF ++G L R+ W++V+ D E D++L+GDDPWHE
Sbjct: 757 SFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHE 816
Query: 647 FCNMVKRIFICSSQDVKKM 665
F N V I I S +V++M
Sbjct: 817 FVNSVWYIKILSPLEVQQM 835
>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
Length = 826
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/341 (52%), Positives = 240/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGMPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 533 ISTISAAADSD----GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGV 588
ST S AD G S Q+ ++ P Q L+ R+ KV G
Sbjct: 678 FSTSSVDADVSSMPIGDSGFQSSIYGGVQDSSELLPSAGQVDPPTLS--RTFVKVYKLG- 734
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 646
+VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 735 SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEA 794
Query: 647 FCNMVKRIFICSSQDVKKM 665
F N V I I S +DV+KM
Sbjct: 795 FVNNVWYIKILSPEDVQKM 813
>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 899
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 247/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTH
Sbjct: 80 HNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F +++ PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 ISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W++S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 SDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 765 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 823
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 824 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 854
>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 843
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/341 (53%), Positives = 240/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
NI + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNITMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 SDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 506 IELINHATSSAPSEKVPVSSLTTEGHIISTI-----SAAADSDGKSDIAKE--FKEKKQE 558
+ ++ H S A + + ++ + G ++ T +++AD++ + E F+
Sbjct: 636 VMVLPHCNSDAQNSTLFGVNIDSSGLLLPTTVPGYTTSSADTNSSTMPLAESGFQGSLYG 695
Query: 559 QVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
+Q S + QS N+++T V++ + +VGR+LD++ Y L +EL +MF I+G
Sbjct: 696 CMQDSSELLQSAGHTDPENQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEG 755
Query: 618 QLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
+L R+ W++V+ D E D++L+GDDPW F N V I I S +D++KM
Sbjct: 756 KLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 805
>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 904
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 246/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K+LTASDTSTH
Sbjct: 80 HNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPSKQPTNYFCKILTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 SDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 633
SN++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 775 SNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 833
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 834 NDVLLLGDGPWPEFVNSVGYIKILSPQEVQQM 865
>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 908
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 244/359 (67%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 775 RTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 833
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++L+GDDPW EF N V I I S Q+V++M
Sbjct: 834 VLLLGDDPWPEFVNSVWCIKILSLQEVQQM 863
>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
Length = 811
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/370 (47%), Positives = 238/370 (64%), Gaps = 22/370 (5%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQRIPLFRLPSKILCRV 76
+Y+ELW ACAGPL +PK+G V YFPQGHME+ + A + +P F L +I CRV
Sbjct: 59 IYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTFGLQPQIFCRV 118
Query: 77 VNIHLMAEQETDEVYAQITLLPEPS-----------QNEPTTPDPCPADSPRPKVHSFSK 125
++ L+A +E DEVY Q+TLLP P ++ T + + + H F K
Sbjct: 119 EDVQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCK 178
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDT+THGGFSV R+ A +C PPLD + P+QEL+AKDLHG EW+F+HI+RGQPRR
Sbjct: 179 TLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 238
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV+ K LV+GD +FLRGE G L +G+R AR ++ +P S+I SQ V
Sbjct: 239 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGPDV 298
Query: 246 LATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
L++ + A++ ++ F V+Y PR S F++ KY++A+N++ VG R+KM+F+ +DSPER
Sbjct: 299 LSSVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAINSRIPVGTRFKMKFDLDDSPER 358
Query: 304 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
R+SG V G+ D P W +SKWR L V+WDE +RVSPWEI+ V+ P
Sbjct: 359 RYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVS-------LP 411
Query: 363 VLAKNKRPRL 372
L+ PRL
Sbjct: 412 PLSIQSSPRL 421
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 565 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 624
KE + S + RS TKV QG VGRA+DL+ L GYD L+ ELE +F+++ L K
Sbjct: 670 KEPSTPSSQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNMEDLLRDPNK 729
Query: 625 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
W I+YTD E DMM+VGDDPWHEFC +V +I I + ++V+KM+
Sbjct: 730 GWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMT 772
>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 884
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 245/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K+LTASDTSTH
Sbjct: 80 HNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKILTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D S W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 SDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 633
+N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 749 TNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 807
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 808 NDVLLLGDGPWPEFVNSVGCIKILSPQEVQQM 839
>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 842
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/340 (53%), Positives = 240/340 (70%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLVCQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 534 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGR 592
+T SA D+ F+ VQ S + QS N++RT V++ + +VGR
Sbjct: 670 TTASAEIDASAMPIGESGFQSPLYPCVQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGR 729
Query: 593 ALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 650
+LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW F N
Sbjct: 730 SLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNN 789
Query: 651 VKRIFICSSQDVKKM 665
V I I S +D+ KM
Sbjct: 790 VWYIKILSPEDIHKM 804
>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
Length = 846
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/341 (52%), Positives = 240/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 261 NSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 320
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 321 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 361
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 632
T +R+ KV G +VGR+LD+T Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 716 TPSRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDR 774
Query: 633 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
E D++L+GDDPW F N V I I S +DV+KM
Sbjct: 775 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKM 807
>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 846
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 240/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 15/150 (10%)
Query: 537 SAAADSDGKSDIAKE--FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGRA 593
+A+ADSD + E F+ Q S + QS N++RT V++ + +VGR+
Sbjct: 675 TASADSDASAMPLGESGFQSPLYPCGQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGRS 734
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 651
LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW F N V
Sbjct: 735 LDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNV 794
Query: 652 KRIFICSSQDVKKM----------SPGSKL 671
I I S +D+ KM SPG +L
Sbjct: 795 WYIKILSPEDIHKMGEQALESLGPSPGQRL 824
>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
Length = 841
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 241/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ +IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ +
Sbjct: 261 NSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSI 320
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 321 SDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 361
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 534 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGR 592
+T SA AD+ F+ +Q S + QS N++ V++ + +VGR
Sbjct: 669 TTASAHADASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFVKVYKSGSVGR 728
Query: 593 ALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 650
+LD++ Y L +EL +MF I+G+ R+ W++V+ D E D++L+GDDPW F N
Sbjct: 729 SLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNN 788
Query: 651 VKRIFICSSQDVKKM 665
V I I S +D++KM
Sbjct: 789 VWYIKILSPEDIQKM 803
>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
Length = 899
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/342 (53%), Positives = 242/342 (70%), Gaps = 8/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 25 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 84
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 85 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTST 143
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 264 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITS 323
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 324 ISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLT 365
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 12/102 (11%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 769 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM---------SPGSKL 671
VGDDPW EF N V I I S Q+V+++ SPG+++
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSSPGARM 869
>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 891
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 245/360 (68%), Gaps = 9/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P P + + P SP + + F K LTASDTST
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 140 HGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL+AGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 200 FVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 259
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 260 TNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 319
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 377
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ KV G + GR+LD+T YD L EL MF ++G+L R+ W++V+ D E D
Sbjct: 777 RTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 835
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++L+GDDPW EF N V I I S +V++M
Sbjct: 836 VLLLGDDPWQEFVNNVWYIKILSPLEVQQM 865
>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
Length = 880
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 182/342 (53%), Positives = 242/342 (70%), Gaps = 8/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 6 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 65
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 66 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTST 124
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 125 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 184
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 185 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 244
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 245 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITS 304
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 305 ISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLT 346
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 12/102 (11%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 750 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 808
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM---------SPGSKL 671
VGDDPW EF N V I I S Q+V+++ SPG+++
Sbjct: 809 VGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSSPGARM 850
>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
Group]
gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
Length = 899
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 182/342 (53%), Positives = 242/342 (70%), Gaps = 8/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 25 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 84
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 85 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTST 143
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 264 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITS 323
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 324 ISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLT 365
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 12/102 (11%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 769 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM---------SPGSKL 671
VGDDPW EF N V I I S Q+V+++ SPG+++
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSSPGARM 869
>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 896
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 246/360 (68%), Gaps = 9/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P P + + P +P + + F K LTASDTST
Sbjct: 81 HNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTST 140
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 261 TNSRFTIFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 321 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 14/104 (13%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH----TRTKWEIVYTDDEGDM 636
KV G + GR+LD++ YD LI EL MF ++GQL R+ W++V+ D E D+
Sbjct: 763 VKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKM---------SPGSKL 671
+L+GDDPW EF N V I I S +V++M +PG KL
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKVLSPSTSAPGDKL 865
>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 875
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 245/363 (67%), Gaps = 12/363 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQL-EASTNQELNQRIPLF-RLPSKILCR 75
L ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E + IP + LPS+++C
Sbjct: 8 LNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSRLVCL 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPE-PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL+P P+ + P R F K LTASDTST
Sbjct: 68 LDNVTLHADLETDEVYAQMTLIPVLPANEKEALISPDIGMRSRQPTEYFCKTLTASDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFS+ R+ A + PPLD Q+ P QEL A+DLH EW F+HI+RGQPRRHLLTTGWS
Sbjct: 128 HGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTTGWSV 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGD +F+R + G+L +G+R RQQ+ MPSSV+SS SMH+GVLA A+HA A
Sbjct: 188 FVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAANHAAA 247
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I + KY +A+ + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 248 TSSRFTIFYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESSVRRYMGTITG 307
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNK 368
+ D P W +S WRSLKV WDE + R RVS WEIEP TP L+ PV + K
Sbjct: 308 MGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT---TPFLLCPPPVAFRTK 364
Query: 369 RPR 371
RPR
Sbjct: 365 RPR 367
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKV G +VGR++D+ Y L EL +F++ L RT W++V+ D+E D
Sbjct: 740 RTFTKVHKLG-SVGRSIDVQKFQNYSELRAELARLFNLDNLLDDPQRTGWQLVFVDNEND 798
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
+LVGDDPW EF N V+ I I S ++++M
Sbjct: 799 TLLVGDDPWEEFVNYVRSIKILSPNEIQQM 828
>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
Length = 914
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 187/361 (51%), Positives = 246/361 (68%), Gaps = 12/361 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKVLTASDTS 133
N+ + A+ ETDEVYAQ+TL P Q + PAD S + + F K LTASDTS
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNPQEQKDAF--LPADLGTSGKQPTNYFCKTLTASDTS 137
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 138 THGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 197
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 257
Query: 254 ATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 258 ATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 311 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 370 P 370
P
Sbjct: 376 P 376
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 646
+ GR+L++T Y L EL MF ++GQL R+ W+++Y D + D++L+GDDPW +
Sbjct: 791 SFGRSLEITRFSSYLELRSELARMFGLEGQLEDPLRSGWQLIYIDRDNDVLLLGDDPWPD 850
Query: 647 FCNMVKRIFICSSQDVKKM 665
F I I S Q++++M
Sbjct: 851 FVKNASCIKILSPQELQQM 869
>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
partial [Cucumis sativus]
Length = 884
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/359 (51%), Positives = 246/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 5 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQL 64
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTH
Sbjct: 65 HNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTH 124
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 125 GGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 184
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 185 VSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 244
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F +++ PR S+F+I L KY++AV + + +VGMR++M FE +S RR+ GT+ G+
Sbjct: 245 ISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRYMGTITGI 304
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W++S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 305 SDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 361
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 750 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 808
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 809 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 839
>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
Length = 849
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 242/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ +IP + LP +++C++
Sbjct: 23 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLVCQL 82
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 83 HNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTH 142
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 143 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIF 202
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 203 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHASAT 262
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 263 NSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGI 322
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D + W++S WRS+KV WDE + R RVS WEIEP
Sbjct: 323 SDLDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 363
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 568 QSKQSCLTSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTK 624
Q+ + T N++ T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+
Sbjct: 711 QNAEQIDTQNQNPTFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSG 770
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
W++V+ D E D++L+GDDPW F N V I I S +D++KM
Sbjct: 771 WQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 811
>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 773
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 239/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASAT 258
Query: 256 QTMFVVYYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 259 NSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGI 318
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 SDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 575 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 631
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 632 DEGDMMLVGDDPW 644
E D++L+GDDPW
Sbjct: 760 KENDILLLGDDPW 772
>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 182/342 (53%), Positives = 241/342 (70%), Gaps = 8/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 24 LNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 83
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 84 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQP-TNYFCKTLTASDTST 142
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 143 HGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSV 202
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 203 FVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 262
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+FII L KY+++V + + +VGMR++M FE E+S RR+ GT+
Sbjct: 263 TNSRFTIFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMGTITT 322
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 323 ISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLT 364
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 769 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 828
Query: 649 NMVKRIFICSSQDVKKMSPGSKLPMFSIEG 678
N V I I S Q+V++M G + + S G
Sbjct: 829 NSVGCIKILSPQEVQRMVRGGEGLLSSAPG 858
>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/340 (52%), Positives = 237/340 (69%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YF QGH EQ+ ASTN+E++ RIP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRL+AGD+ +F+ E +L +G++ R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLIAGDSVLFIWNEKNQLLLGIKRATRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+FII L KYL+AV + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFIIPLAKYLKAVYYTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFS-PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 SDLDVARWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
+R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E
Sbjct: 777 SRTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREN 835
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 836 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 866
>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
Length = 836
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 245/360 (68%), Gaps = 9/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P P + + P SP + + F K LTASDTST
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 140 HGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL+AGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 200 FVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 259
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 260 TNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 319
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 377
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ KV G + GR+LD+T YD L EL MF ++G+L R+ W++V+ D E D
Sbjct: 680 RTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 738
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++L+GDDPW EF N V I I S +V++M
Sbjct: 739 VLLLGDDPWQEFVNNVWYIKILSPLEVQQM 768
>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 7/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 8 LNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQL 67
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 68 HNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLDLGMPSKQPTNYFCKTLTASDTSTH 127
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 128 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
Query: 256 QTMFVVYYKPR---TSQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 248 NSCFTVFYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRRYMGTITG 307
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
D P W +S WRS+KV WDE + R RVS WEIEP +
Sbjct: 308 TSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTS 350
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 632
T +R+ KV G +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 693 TPSRTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDR 751
Query: 633 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
E D++L+GDDPW F N V I I S +DV KM
Sbjct: 752 ENDVLLLGDDPWELFVNNVWYIKILSPEDVLKM 784
>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
Length = 821
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 239/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASAT 258
Query: 256 QTMFVVYYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 259 NSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGI 318
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 SDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 575 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 631
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 632 DEGDMMLVGDDPWHEF 647
E D++L+GDDPW +
Sbjct: 760 KENDILLLGDDPWEYY 775
>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 244/359 (67%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
WITHOUT FERTILIZATION
gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 811
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 239/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASAT 258
Query: 256 QTMFVVYYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 259 NSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGI 318
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 SDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 575 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 631
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 632 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
E D++L+GDDPW F N V I I S +DV +M
Sbjct: 760 KENDILLLGDDPWESFVNNVWYIKILSPEDVHQM 793
>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
Length = 758
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 180/371 (48%), Positives = 234/371 (63%), Gaps = 26/371 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQ A + IP L +I CRV
Sbjct: 50 IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-GAMVSYSSPLDIPKLDLSPQIFCRVA 108
Query: 78 NIHLMAEQETDEVYAQITLLP---------------EPSQNEPTTPDPCPADSPRPKVHS 122
N+HL+A +ETDEVY Q+TLLP E +E +P H
Sbjct: 109 NVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTP----HM 164
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI+RGQ
Sbjct: 165 FCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQ 224
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLLTTGWS FV+ K LV+GD +FLR ENGEL +G+R AR ++ +P S+I S
Sbjct: 225 PRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSS 284
Query: 243 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
+L+ ++AV+ ++MF V+Y PR S+F+I KY+ ++ N +G R++MRFE +DS
Sbjct: 285 -SILSLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSIKNPICIGTRFRMRFEMDDS 343
Query: 301 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
PERR +G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P + + P L
Sbjct: 344 PERRCAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDP--SGSLPPL 401
Query: 360 VQPVLAKNKRP 370
+ KRP
Sbjct: 402 SIQSSPRPKRP 412
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 562 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 621
S ++S SK+ C TKV QG VGRA+DL+ L GY+ L+ ELE +F+++G L
Sbjct: 628 ASNQQSSSKRIC-------TKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRD 680
Query: 622 RTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
K W I+YTD E DMM+VGDDPWH+FC++V +I + + ++V+
Sbjct: 681 PEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVE 723
>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
Length = 844
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 181/352 (51%), Positives = 243/352 (69%), Gaps = 6/352 (1%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G + Q L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP
Sbjct: 7 GLVQQSHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPN 66
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSF 123
+ LP +++C++ N+ + A+ ETDEVYAQ+TL P + + T P P + + F
Sbjct: 67 YPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYF 126
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRHIFRGQP 186
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+
Sbjct: 187 KRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVLSSDSMHI 246
Query: 244 GVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDS 300
G+LA A+HA AT + F V++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S
Sbjct: 247 GLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEES 306
Query: 301 PERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
RR+ GT+ G+ D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 307 SVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 576 SNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDD 632
SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 734 SNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDK 793
Query: 633 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
E D++L+GDDPW F + V I I S +DV++M
Sbjct: 794 ENDILLLGDDPWESFVSNVWYIKILSPEDVQEM 826
>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
Length = 907
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 184/360 (51%), Positives = 246/360 (68%), Gaps = 10/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 28 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + +P + F K LTASDTST
Sbjct: 88 HNVTMNADPETDEVYAQMTLQPLNPQELKDPYLPAELGTANKQP-TNYFCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAEKVFPPLDFTLQPPAQELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 207 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 266
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S +F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 267 TNSRFTIFYNPRASPCEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 326
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D + W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 327 ISDLDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPTPFPLRLKRP 384
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 787 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 846
Query: 649 NMVKRIFICSSQDVKKM 665
N V I I S Q+V++M
Sbjct: 847 NSVFCIKILSPQEVQQM 863
>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
Length = 748
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/365 (51%), Positives = 240/365 (65%), Gaps = 17/365 (4%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQRIPLFRLPSKILCRVVNIH 80
LW ACAGPL +PK+G V YFPQGH+EQ L AS E +IP LP ++ CRV+N++
Sbjct: 23 LWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSXHLPPQVFCRVLNVN 82
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV--------HSFSKVLTASDT 132
L AE ETDEVYAQ+TL+PEP + P + H F K LTASDT
Sbjct: 83 LHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTPHMFCKTLTASDT 142
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGW
Sbjct: 143 STHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGW 202
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-SVISSQ-SMHLGVLATAS 250
S FV + LV+GD +FLRG++GEL +G+R + +S +P+ SV+S Q L VL+ A+
Sbjct: 203 SLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSGQWGSQLSVLSAAA 262
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+A+++++MF ++Y PR S+F+I KY+ +N VGMR+KMRFE ED+ ERR SG
Sbjct: 263 NAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPVCVGMRFKMRFEMEDAAERRCSGV 322
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+ G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P L K
Sbjct: 323 ITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSV--LPPALNVPRL-KK 379
Query: 368 KRPRL 372
RP L
Sbjct: 380 LRPSL 384
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
S RS TKV G AVGR++DL+ L GY L+ ELE++F+++G LH K W +VYTD+E
Sbjct: 628 ASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNE 687
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
DM+LVGDDPW EFC++V +I IC+ DV+ MSP
Sbjct: 688 NDMVLVGDDPWQEFCDVVCKILICTQDDVENMSP 721
>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/362 (53%), Positives = 247/362 (68%), Gaps = 12/362 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH+EQ+ AST ++ + IP + LPSKI+C +
Sbjct: 6 LNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSKIICLL 65
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
N+ L A+ ETDEVYAQ+ LLP + S+ E + +P + F K LTASDTSTH
Sbjct: 66 DNVTLHADPETDEVYAQMILLPIQISEKEALLSPDLEVVNKQPTEY-FCKTLTASDTSTH 124
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFS+ R+ A + PPLD + P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS F
Sbjct: 125 GGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRHLLTTGWSVF 184
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRL AGD+ +F+R + G L +G+R RQQ+ MPSSV+SS SMH GVLA ASHA AT
Sbjct: 185 VSAKRLQAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFGVLAAASHAAAT 244
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY +A+ N +F VGMR++M FE E+S RR+ GT+ G+
Sbjct: 245 SSRFKIFYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESSVRRYVGTITGL 304
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKR 369
D P W S WRSLKV WDE + R RVS WEIEP TP L+ P+ ++KR
Sbjct: 305 GDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPL---TTPFLLCPPPLALRSKR 361
Query: 370 PR 371
PR
Sbjct: 362 PR 363
>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
Length = 907
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 244/349 (69%), Gaps = 9/349 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLP 69
P + L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP
Sbjct: 17 PEGDKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLP 76
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKV 126
+++C++ N+ + A+ ETDEVYAQ+TL P SQ++ PA+ + + + F K
Sbjct: 77 PQLICQLHNVTMHADVETDEVYAQMTLQPL-SQDDQKDAYLLPAELGTASKQPTNYFCKT 135
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A + P LD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RH
Sbjct: 136 LTASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRH 195
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+L
Sbjct: 196 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLL 255
Query: 247 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPER 303
A A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S R
Sbjct: 256 AAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVR 315
Query: 304 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
R+ GT+ G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 316 RYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 364
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 633
S R+ KV G + GR+LD++ YD L EL +F ++G L R+ W++V+ D E
Sbjct: 772 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRE 830
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM-----SPGSKLP 672
D++L+GDDPW EF N V I I S +V++M SP + +P
Sbjct: 831 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKEGLSPAASVP 874
>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
Length = 805
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 239/341 (70%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASAT 258
Query: 256 QTMFVVYYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 259 NSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGI 318
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 SDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDD 632
T ++ KV G +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 696 TQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDK 754
Query: 633 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
E D++L+GDDPW F N V I I S +DV++M
Sbjct: 755 ENDILLLGDDPWESFVNNVWYIKILSPEDVQQM 787
>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
Length = 638
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 241/369 (65%), Gaps = 25/369 (6%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQRIPLFRLPSKILCRVVNIH 80
LW ACAGPL +PK+G V YFPQGH+EQ L AS E +IP LP ++ CRV+N++
Sbjct: 23 LWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSXHLPPQVFCRVLNVN 82
Query: 81 LMAEQETDEVYAQITLLPEPSQ------------NEPTTPDPCPADSPRPKVHSFSKVLT 128
L AE ETDEVYAQ+TL+PEP E + +P H F K LT
Sbjct: 83 LHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTP----HMFCKTLT 138
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLL 198
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-SVISSQ-SMHLGVL 246
TTGWS FV + LV+GD +FLRG++GEL +G+R + +S +P+ SV+S Q L VL
Sbjct: 199 TTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSGQWGSQLSVL 258
Query: 247 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
+ A++A+++++MF ++Y PR S+F+I KY+ +N VGMR+KMRFE ED+ ERR
Sbjct: 259 SAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPVCVGMRFKMRFEMEDAAERR 318
Query: 305 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
SG + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P
Sbjct: 319 CSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLP--PALNVPR 376
Query: 364 LAKNKRPRL 372
L K RP L
Sbjct: 377 L-KKLRPSL 384
>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
Length = 934
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/437 (45%), Positives = 271/437 (62%), Gaps = 32/437 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 63 LNSELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLPPQLICQL 122
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 123 HNVTMHADVETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQPTNY-FCKTLTASDTST 181
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 182 HGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 241
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 242 FVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 301
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR+ S+F+I L KY+++V + + +VGMR++M FE E+S RR+ GTV
Sbjct: 302 TNSRFTIFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMGTVTA 361
Query: 312 VEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 362 ISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLT------------------ 403
Query: 371 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 430
+ + P P PW++ L H + V +D + + W + +SNF
Sbjct: 404 --TFPMYPTAFPLRLKRPWASGLPSMHGMFN-GVKNDDFARYSSLMWLGNGDRGTQSSNF 460
Query: 431 MSRTQSDGEWLTSPRVK 447
S WL PR++
Sbjct: 461 QGLGVS--PWL-QPRIE 474
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 813 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 872
Query: 649 NMVKRIFICSSQDVKKM 665
N V I I S QDV +M
Sbjct: 873 NSVWCIKILSPQDVHQM 889
>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 866
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/360 (50%), Positives = 246/360 (68%), Gaps = 9/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P P + + P +P + + F K LTASDTST
Sbjct: 81 HNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPGKQPTNYFCKTLTASDTST 140
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S R+ GT+ G
Sbjct: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVPRYMGTITG 320
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + +RP
Sbjct: 321 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLRRP 378
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH----TRTKWEIVYTDDEGDM 636
KV G + GR+LD++ YD LI EL MF ++GQL R+ W++V+ D E D+
Sbjct: 763 VKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
+L+GDDPW EF N V I I S +V++M G
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKG 853
>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
Length = 818
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 239/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 326 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 245/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTH
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTH 141
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 142 GGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 201
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 202 VSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 261
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 262 NSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 321
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 322 CDLDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 568 QSKQSCLTSN-RSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRT 623
QS ++ T N +S T V++ + + GR+LD++ Y L EL MF ++GQL R+
Sbjct: 739 QSSENLGTENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRS 798
Query: 624 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
W++V+ D E D++L+GDDPW EF + V I I S Q+V++M
Sbjct: 799 GWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 840
>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
Length = 818
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 239/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSI 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 326 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
Length = 730
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/392 (46%), Positives = 243/392 (61%), Gaps = 23/392 (5%)
Query: 9 SQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
S P S S L ELW ACAGPL+ +PK+G V YFPQGH+EQL + + ++ L
Sbjct: 43 SAPVSGSVCL--ELWHACAGPLISLPKKGSVVVYFPQGHLEQLP-------DLPLAVYDL 93
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP-----CPADSPRPKV--- 120
PS I CRVV++ L AE DEVYAQ++L+P+ Q E C + V
Sbjct: 94 PSYIFCRVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKST 153
Query: 121 --HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG+EW+F+HI
Sbjct: 154 TTHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHI 213
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +G+R A+ + + S
Sbjct: 214 YRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCS 273
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFE 296
Q ++ L HA++ +++F + Y PR +S+FII L+K+L++++ F+VGMR+KMRFE
Sbjct: 274 QQLNQSTLTDVVHAMSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYSFSVGMRFKMRFE 333
Query: 297 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
ED+ ERR+ G + G+ D P W SKWR L V+WD+ R RVSPWEIEP + +
Sbjct: 334 TEDAAERRYMGLITGISDLDPARWPGSKWRCLVVRWDD-METNRHSRVSPWEIEPSGSVS 392
Query: 356 TPNLVQPVLAKNKRPRLSMEVPPLDLPSAASA 387
+ N K R P +P A
Sbjct: 393 SCNSFMTPGLKRSRSGFPSSKPEFPVPDGIGA 424
>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
Length = 718
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/379 (46%), Positives = 245/379 (64%), Gaps = 32/379 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH EQ + + + + +P+ + CRV+++
Sbjct: 49 ELWHACAGPLISLPKKGSVVVYIPQGHFEQAQ-------DFPVTAYNIPTHVFCRVLDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQ-------------NEPTTPDPCPADSPRPKVHSFSKVL 127
L AE+ +DEVY Q+ L+PE Q E T + +P H F K L
Sbjct: 102 LHAEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEAMVKSTTP----HMFCKTL 157
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 158 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHL 217
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRG++GEL +G+R A+ +S + S Q + G L
Sbjct: 218 LTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGTLM 277
Query: 248 TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
++A++++ F Y PR +S+FII +NK++++++ ++VGMR++MRFE EDS ERRF
Sbjct: 278 DVANALSSRCAFSACYNPRVSSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDSAERRF 337
Query: 306 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+G V+G+ D P W SKWR L V+WD+ R +RVSPWEIEPF SA+ NL+ L
Sbjct: 338 TGLVLGISDVDPVRWPGSKWRCLLVRWDD-IEAGRHNRVSPWEIEPF-GSASNNLMAAGL 395
Query: 365 AKNKRPRLSMEVPPLDLPS 383
KR R+ M ++ P+
Sbjct: 396 ---KRTRIGMTSTKMEFPA 411
>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
Length = 831
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/342 (52%), Positives = 239/342 (69%), Gaps = 8/342 (2%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
+L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP +++C+
Sbjct: 29 NLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQ 88
Query: 76 VVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ ++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTS
Sbjct: 89 LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTS 147
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 148 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWS 207
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 208 VFVSAKRLVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLAAAAHAA 267
Query: 254 ATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
+T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 268 STNSRFTIFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 327
Query: 311 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 328 EVSDADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPL 369
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
++R+ KV G +VGR+LD+T Y L +EL +MF I+GQL R+ W++V+ D E
Sbjct: 730 TSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRE 788
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV K+ P +
Sbjct: 789 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKLGKQGNDPRY 829
>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
Length = 819
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 239/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 326 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 718 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 776
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 777 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 817
>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
Length = 821
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 239/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 326 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 720 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 778
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 779 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 819
>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 709
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/390 (46%), Positives = 250/390 (64%), Gaps = 33/390 (8%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ------LEASTNQELNQRIPL 65
S +S + ELW ACAGPL+ +PK+G V YFPQGH+EQ L AS N
Sbjct: 19 SGSSSTVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQHLHDFPLPASAN--------- 69
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKV---- 120
+PS + CRV+++ L AE+ +DEV+ Q+ L+PE Q ++ AD
Sbjct: 70 --IPSHVFCRVLDVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVM 127
Query: 121 -----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF
Sbjct: 128 KSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRF 187
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+GEL +G+R A+ +S S
Sbjct: 188 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSA 247
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKM 293
+S Q + L +A++ + F ++Y PR TS+FII ++++L++++ ++ GMR++M
Sbjct: 248 LSGQQLSPTSLMDVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYSYSAGMRFRM 307
Query: 294 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
RFE ED+ ERRF+G +VG+ D P W SKWR L V+WD+ +TR +RVSPWEIEP
Sbjct: 308 RFETEDAAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDD-LEVTRHNRVSPWEIEPSG 366
Query: 353 ASATPNLVQPVLAKNKRPRLSMEVPPLDLP 382
+++T N + + A KR ++ + L+ P
Sbjct: 367 SASTANNL--MSAGLKRTKIGLPSAKLEFP 394
>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 933
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 245/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 320 CDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 797 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 855
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM 665
+GDDPW EF + V I I S Q+V++M
Sbjct: 856 LGDDPWPEFVSSVWCIKILSPQEVQQM 882
>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
Length = 816
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 239/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 207 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 266
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 267 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 326
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 327 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 367
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 715 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 773
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 774 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 814
>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
Length = 818
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 239/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 207 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 266
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 267 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 326
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 327 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 367
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 935
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 245/359 (68%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTH
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTH 141
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 142 GGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 201
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 202 VSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 261
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 262 NSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 321
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 322 CDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 799 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 857
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM 665
+GDDPW EF + V I I S Q+V++M
Sbjct: 858 LGDDPWPEFVSSVWCIKILSPQEVQQM 884
>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 242/342 (70%), Gaps = 9/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G R YFPQGH EQ+ ASTN+E++ IP + LP++++C++
Sbjct: 5 LNSELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQLICQL 64
Query: 77 VNIHLMAEQETDEVYAQITLLP---EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ + A+ ETDEVYAQ+TL P E ++ P S +P + F K LTASDTS
Sbjct: 65 HNVTMHADVETDEVYAQMTLQPLSPEDKKDAYLLPAELGTASKQPSNY-FCKTLTASDTS 123
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 124 THGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 183
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 184 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 243
Query: 254 ATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
AT + F ++Y PRT S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 244 ATNSRFTIFYNPRTSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 303
Query: 311 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 304 GISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 345
>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
Length = 795
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 239/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 5 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 64
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 65 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 123
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 124 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 183
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 184 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 243
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 244 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 303
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 304 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 344
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 694 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 752
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 753 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 793
>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 786
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 238/341 (69%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 144
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 204
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 205 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 264
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S +F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 265 TNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 324
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 325 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 365
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 716 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 774
Query: 634 GDMMLVGDDPW 644
D++L+GDDPW
Sbjct: 775 NDVLLLGDDPW 785
>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
Length = 930
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/337 (52%), Positives = 236/337 (70%), Gaps = 11/337 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ STN+ +IP + L S++LC+V N+
Sbjct: 44 ELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLASQLLCQVHNV 103
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A++ETDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 104 TLHADKETDEIYAQMSLQPVNSEKDVF---PIPDFGLKPNKHPTEFFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 161 GFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSMFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+KRL AGD+ +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 221 GAKRLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANR 280
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S+F+I L K+ ++V N + +VGMR+ M FE E+S +RR+ GT+ G+
Sbjct: 281 STFTIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRRYMGTISGIS 340
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D P W SKWR L+V+WDEP + +RVSPWE+E
Sbjct: 341 DLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVE 377
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TR-TKWEIVYTDDEGD 635
R+ TK+Q G +VGR++D++ Y+ L E+E MF ++G L+ TR + W++VY D E D
Sbjct: 817 RTYTKIQKTG-SVGRSIDVSGFKNYEELRSEIERMFGLEGLLNDTRGSSWKLVYVDFEND 875
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++LVGDDPW EF V+ I I S +V++M
Sbjct: 876 VLLVGDDPWEEFVGCVRCIRILSPTEVQQM 905
>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
Length = 843
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/340 (52%), Positives = 240/340 (70%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L EL ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTRQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 GDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 574 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 631
L + R+ KV G +VGR+LD+T Y L EL +MF I+G L R+ W++V+ D
Sbjct: 713 LNATRTFVKVYKSG-SVGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFVD 771
Query: 632 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
E D++L+GDDPW F N V I I S +DV K+
Sbjct: 772 RENDVLLLGDDPWEAFVNNVWYIKILSPEDVLKL 805
>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
Length = 712
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/389 (46%), Positives = 245/389 (62%), Gaps = 13/389 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L +P + CRVV++
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEHL----GDAPAAAAAAAAVPPHVFCRVVDVT 93
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTST 134
L+A+ TDEVYAQ++L+PE + D D K H F K LTASDTST
Sbjct: 94 LLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTST 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS
Sbjct: 154 HGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSA 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVA
Sbjct: 214 FVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVA 273
Query: 255 TQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G + G
Sbjct: 274 TESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASERRYTGIITGS 333
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P L
Sbjct: 334 GDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKPCL 392
Query: 373 SMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
P +P P A AQ H + Q
Sbjct: 393 PHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 817
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 238/341 (69%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 144
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 204
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 205 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 264
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S +F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 265 TNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 324
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 325 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 365
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 716 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 774
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 669
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 775 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 811
>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
Length = 924
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/343 (51%), Positives = 239/343 (69%), Gaps = 12/343 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G V YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 17 LNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 76
Query: 77 VNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
N+ L A+ ETDEVYAQ+TL P EP ++ P+ P + F K LTASDT
Sbjct: 77 HNVTLQADVETDEVYAQMTLQPLNPQEPKESYLAPALGTPSGQP---TNYFCKTLTASDT 133
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFS+ R+ A + P LD Q P QEL+A+DLH EW+F+HI+RGQP+RHLLTTGW
Sbjct: 134 STHGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKRHLLTTGW 193
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV++KRLVAGD+ +F+R + G+L +G+R R Q MPSSV+SS SMH+GVLA A+HA
Sbjct: 194 SVFVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIGVLAAAAHA 253
Query: 253 VATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 309
+T F ++Y PR S+F++ L K+ +AV + + ++GMR++M FE E+S RR+ GT+
Sbjct: 254 ASTNCRFTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEESTVRRYMGTI 313
Query: 310 VGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
G+ D P+ W++S+WRS+KV WDE + R RVS WEIEP
Sbjct: 314 TGIGDLDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEPL 356
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKV G +VGR+LD+T GY L EL+ MF ++GQL R+ W++V+ D E D
Sbjct: 792 RTFTKVYKLG-SVGRSLDVTRFNGYQELRAELDRMFGLEGQLEDPQRSGWQLVFVDKEKD 850
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N V+ I I S +V +MS
Sbjct: 851 VLLLGDDPWEEFVNSVRFIKILSPPEVMQMS 881
>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
Length = 809
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 180/341 (52%), Positives = 239/341 (70%), Gaps = 8/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+P P S +P + F K LTASDTST
Sbjct: 81 HDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP-TNYFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 140 HGGFSVPRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 200 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 259
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F +++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 TNSRFTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 319
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 320 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 360
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 708 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 766
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 669
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 767 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 803
>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1103
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 246/394 (62%), Gaps = 40/394 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E IP + LPS+++C + N+
Sbjct: 77 ELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRLVCLLDNV 136
Query: 80 HL---------------MAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSF 123
L A+ ETDEVYAQ+TL+P P NE P R F
Sbjct: 137 TLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPANEKEALMSPDIGIRSRQPTDYF 196
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFS+ R+ A + PPLD +Q+ P QEL A+DLH EW F+HI+RGQP
Sbjct: 197 CKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHFRHIYRGQP 256
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWS FV++KRL AGD +F+R + G+L +G+R RQQ+ MPSSV+SS SMH+
Sbjct: 257 RRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHI 316
Query: 244 GVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDS 300
GVLA A+HA AT + F ++Y PR S+F+I + KY +A+ N + +VGMR++M FE E+S
Sbjct: 317 GVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICNLQVSVGMRFRMVFETEES 376
Query: 301 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
RR+ GT+ G+ D P W +S WRSLKV WDE + R RVS WEIEP TP L
Sbjct: 377 SVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT---TPFL 433
Query: 360 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL 393
+ P PPL A PW R+
Sbjct: 434 LCP--------------PPLTF--RAKRPWGGRV 451
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 633
++R+ TKV G +VGR++D+ Y L EL +F+++G L R+ W++V+ D+E
Sbjct: 809 TSRTFTKVHKLG-SVGRSIDVQKFQNYSELRVELARLFNLEGLLDDPQRSGWQLVFVDNE 867
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
D +LVGDDPW EF N V+ I I S ++ +MS
Sbjct: 868 NDTLLVGDDPWEEFVNCVRSIKILSPNEILQMS 900
>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 788
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/375 (47%), Positives = 239/375 (63%), Gaps = 34/375 (9%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQ +A + IP F L +I+CRVV
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIVCRVV 120
Query: 78 NIHLMAEQETDEVYAQITLLP-------------------EPSQNEPTTPDPCPADSPRP 118
N+ L+A ++TDEVY Q+TLLP E +N ++ P
Sbjct: 121 NVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTP------ 174
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
H F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI
Sbjct: 175 --HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHI 232
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
+RGQPRRHLLTTGWS FV+ K LV+GD +FLR E GEL +G+R AR ++ +P S+I
Sbjct: 233 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEK 292
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFE 296
S +L+ ++AV+T++MF V+Y PR ++F+I KY+ ++ + +G R++MRFE
Sbjct: 293 NSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFE 351
Query: 297 GEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
+DSPERR +G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P V +
Sbjct: 352 MDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSV--S 409
Query: 356 TPNLVQPVLAKNKRP 370
P+L + KRP
Sbjct: 410 LPHLSIQSSPRPKRP 424
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 564 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 623
P E+ + + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 651 PVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPE 710
Query: 624 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 711 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 758
>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
Length = 730
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 180/397 (45%), Positives = 239/397 (60%), Gaps = 26/397 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V YFPQGH+EQL + CRVV++
Sbjct: 68 ELWHACAGPVAPMPRKGSVVVYFPQGHLEQLGGDAAAANAPVP------PHVFCRVVDVS 121
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV--------------HSFSKV 126
L A+ TDEVYAQ++LLPE NE H F K
Sbjct: 122 LHADASTDEVYAQLSLLPE---NEEAVRRKREGAEEGSGGEDGETGKQRFSRMPHMFCKT 178
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDLHG EW+F+HI+RGQPRRH
Sbjct: 179 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRGQPRRH 238
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + SQ +LG L
Sbjct: 239 LLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQCSNLGTL 298
Query: 247 ATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
A +HAVAT+ MF +YY PR SQ FI+ K+ ++++ F+VG+R+KMR+E ED+ ERR
Sbjct: 299 ANVAHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSLSQPFSVGLRFKMRYESEDAAERR 358
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
++G + G D P W+ SKW+ L V+WD+ RP+RVSPWEIE +++ +L P
Sbjct: 359 YTGIITGTGDADPMWRGSKWKCLLVRWDDDVECRRPNRVSPWEIELTSSASGSHLATPA- 417
Query: 365 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
+K +P LS P +P P AQ + Q
Sbjct: 418 SKRLKPCLSHVNPEYMVPHGGGRPDFVESAQFRKVLQ 454
>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
Length = 791
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 178/371 (47%), Positives = 236/371 (63%), Gaps = 26/371 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQ +A + IP F L +I CRVV
Sbjct: 57 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIFCRVV 115
Query: 78 NIHLMAEQETDEVYAQITLLP---------------EPSQNEPTTPDPCPADSPRPKVHS 122
++ L+A +ETDEVY Q+TLLP E +E +P H
Sbjct: 116 HVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTP----HM 171
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI+RGQ
Sbjct: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQ 231
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLLTTGWS FV+ K L +GD +FLR E GEL +G+R AR ++ +P S+I S
Sbjct: 232 PRRHLLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS 291
Query: 243 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
+L+ ++AV+T++MF V+Y PR ++F+I KY+ ++ N +G R++MRFE +DS
Sbjct: 292 -NILSLLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRNPICIGTRFRMRFEMDDS 350
Query: 301 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
PERR +G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P + + P+L
Sbjct: 351 PERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSI--SLPHL 408
Query: 360 VQPVLAKNKRP 370
+ KRP
Sbjct: 409 SIQSSPRPKRP 419
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 564 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 623
P E+ + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 654 PVETPASNPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLTELERLFNMEGLLRDPE 713
Query: 624 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 714 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 761
>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/341 (52%), Positives = 240/341 (70%), Gaps = 7/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG-QPRRHLLTTGWST 194
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG QP+RHLLTTGWS
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 261 TNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 321 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 361
>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
Length = 739
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/396 (44%), Positives = 248/396 (62%), Gaps = 19/396 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L + LP + CRVV++
Sbjct: 56 ELWHACAGPVAPLPRKGTVVVYLPQGHLEHLGDAAAAAAGGAPAPAALPPHVFCRVVDVT 115
Query: 81 LMAEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRPKV----HSFSKVL 127
L A+ TDEVYAQ+ L+ E + + D ++ + + H F K L
Sbjct: 116 LHADASTDEVYAQLALVAENEDVARRLRGGSEDGSAGDGDDGEAVKQRFSRMPHMFCKTL 175
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 176 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 235
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA
Sbjct: 236 LTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLA 295
Query: 248 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+HAVAT+++F +YY PR SQ FII +K++++ + +F+ G+R+KMR+E +D+ ERR
Sbjct: 296 NVAHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKSFSQQFSAGLRFKMRYESDDASERRC 355
Query: 306 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
+G + G+ D P W+ SKW+ L V+WD+ RP+R+SPWEIE + + +L P A
Sbjct: 356 TGVIAGIGDADPMWRGSKWKCLMVRWDDDVDFRRPNRISPWEIELTSSVSGSHLSAPN-A 414
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
K +P L P +P+ + P A AQ H + Q
Sbjct: 415 KRLKPCLP---PDYLVPNGSGCPDFAESAQFHKVLQ 447
>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
Length = 719
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/389 (46%), Positives = 244/389 (62%), Gaps = 13/389 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L +P + CRVV++
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEHL----GDAPAAAAAAAAVPPHVFCRVVDVT 93
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTST 134
L+A+ TDEVYAQ++L+PE + D D K H F K LTASDTST
Sbjct: 94 LLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTST 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+RGQPRRHLLTTGWS
Sbjct: 154 HGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSA 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVA
Sbjct: 214 FVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVA 273
Query: 255 TQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G + G
Sbjct: 274 TESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGIITGS 333
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P L
Sbjct: 334 GDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKPCL 392
Query: 373 SMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
P +P P A AQ H + Q
Sbjct: 393 PHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 841
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P + + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLSMELGIPSKQPSNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKFRHIFRGQPKRHLLTTGWSIF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 261 NSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGI 320
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 321 SDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 361
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 577 NRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 633
N+S+T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E
Sbjct: 712 NQSQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRE 771
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GDDPW F N V I I S +D++KM
Sbjct: 772 NDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 803
>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
Full=Auxin-responsive protein IAA24; AltName:
Full=Transcription factor MONOPTEROS
gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
Length = 902
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 236/335 (70%), Gaps = 6/335 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 54 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 114 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGF 173
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 174 SVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 233
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 234 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 293
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 294 FLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDL 353
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 354 DPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 671
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
Length = 902
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 236/335 (70%), Gaps = 6/335 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 54 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 114 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGF 173
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 174 SVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 233
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 234 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 293
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 294 FLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDL 353
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 354 DPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 635
R+ KVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYIKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 671
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
Length = 890
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 236/335 (70%), Gaps = 6/335 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 42 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 101
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 102 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGF 161
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 162 SVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 221
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 222 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 281
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 282 FLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDL 341
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 342 DPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 781 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 839
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 840 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 870
>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
Length = 901
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 235/335 (70%), Gaps = 6/335 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 51 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 110
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 111 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLRGSKHPTEFFCKTLTASDTSTHGGF 170
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 171 SVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 230
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 231 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 290
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 291 FLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDL 350
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 351 DPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 385
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L + W++VY D E D
Sbjct: 792 RTYTKVQKTG-SVGRSIDVTSFRDYEELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 850
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 851 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 881
>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
protein 1; AltName: Full=OsETTIN1
gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
Length = 712
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/389 (46%), Positives = 243/389 (62%), Gaps = 13/389 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L + + CRVV++
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVP----PHVFCRVVDVT 93
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTST 134
L+A+ TDEVYAQ++L+PE + D D K H F K LTASDTST
Sbjct: 94 LLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTST 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+RGQPRRHLLTTGWS
Sbjct: 154 HGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSA 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVA
Sbjct: 214 FVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVA 273
Query: 255 TQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
T+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G + G
Sbjct: 274 TESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGIITGS 333
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P L
Sbjct: 334 GDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKPCL 392
Query: 373 SMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
P +P P A AQ H + Q
Sbjct: 393 PHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
Length = 850
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 236/335 (70%), Gaps = 6/335 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 43 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 102
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 103 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGF 162
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 163 SVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 222
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 223 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 282
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 283 FLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDL 342
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 343 DPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 377
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 782 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 840
Query: 636 MMLVGDDPW 644
++LVGDDPW
Sbjct: 841 VLLVGDDPW 849
>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 369
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 183/359 (50%), Positives = 236/359 (65%), Gaps = 11/359 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G +V YFPQGH EQ+ ST +E + IP + L ++C + NI
Sbjct: 4 ELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTLDNI 63
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+ L+P ++ T P + F K LTASDTSTHGGFS
Sbjct: 64 TLHADLETDEVYAQMVLIPSQDPDKETMLLPDAVVQNKQPTEYFCKTLTASDTSTHGGFS 123
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR-GQPRRHLLTTGWSTFVTS 198
+ R+ A + P LD NQ P QELVA+DLH +W F+HI+R GQPRRHLLTTGWS FV++
Sbjct: 124 IPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSVFVSA 183
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD +F+R + G+L +G+R R Q+ MPSSV+SS SMH+G+LA ASHA T +
Sbjct: 184 KRLQAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGILAAASHAAQTSSR 243
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S+F+I L KY +AV + + VGMR++M FE E+S RR+ GTV G+ D
Sbjct: 244 FTIFYNPRQSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTVRRYMGTVTGIGDL 303
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 371
P W +S WRSLKV WDE + R RVS WEIEP TP L P+ +++KR R
Sbjct: 304 DPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT---TPFLSCPPPLASRSKRAR 359
>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 225/342 (65%), Gaps = 21/342 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQL + + LP + CRVV++
Sbjct: 46 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 98
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK----------VHSFSKVLTAS 130
L AE TDEVYAQ++L+PE + AD + H F K LTAS
Sbjct: 99 LHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTAS 158
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLTT
Sbjct: 159 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTT 218
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L
Sbjct: 219 GWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVV 278
Query: 251 HAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR++G
Sbjct: 279 NAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGL 338
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
+ G+ D P W SKWR L V+WD+ R +RVSPWEIE
Sbjct: 339 ITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 379
>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
Length = 771
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 181/384 (47%), Positives = 243/384 (63%), Gaps = 37/384 (9%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ AS + +P + L +I C+V N
Sbjct: 42 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPLDVPTYDLHPQIFCKVAN 100
Query: 79 IHLMAEQETDEVYAQITLLP---------EPSQNEPTTPD-----PCPADSPRPKVHSFS 124
+ L+A +E DEVY Q+TLLP E + E D PA S H F
Sbjct: 101 VQLLANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKS---TPHMFC 157
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPL P+QELVAKDLHG EW+F+HI+RGQPR
Sbjct: 158 KTLTASDTSTHGGFSVPRRAAEDCFPPLQ----RPSQELVAKDLHGVEWKFRHIYRGQPR 213
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV+ K+LV+GD +FLRGENGEL +G+R AR ++ +P S++ +QS +
Sbjct: 214 RHLLTTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPN 273
Query: 245 VLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
L++ ++A++ ++MF V+Y PR S F++ +KY+ ++ N VG R+KM+F+ ++SPE
Sbjct: 274 FLSSVANAISARSMFHVFYSPRASHADFVVPYHKYVRSIKNPVTVGTRFKMKFDMDESPE 333
Query: 303 RR----------FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
RR SG V G+ D P+ W SKWR L V+WDE DRVSPWE++P
Sbjct: 334 RRSTTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVDP- 392
Query: 352 VASATPNLVQPVLAKNKRPRLSME 375
AS +P +Q + K+PR +E
Sbjct: 393 SASLSPLSIQ-ASRRLKKPRTDLE 415
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 566 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK- 624
ES S+ T+ RS TKV QG VGRA+DL+ L Y+ L+ ELE +F ++G L K
Sbjct: 631 ESTSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFSMEGLLREPDKG 690
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
W ++YTD E D+M+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 691 WRVLYTDRENDIMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 734
>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
Length = 801
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/341 (51%), Positives = 237/341 (69%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+ L P + + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMVLQPLTQEEQKDTFVPIELGIPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLV GD+ +F+R E +L +G+R +R Q+ +PSS++SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSMLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR +S+F++ L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S W +S WRS+KV WDE + R R S WEIEP
Sbjct: 320 GDLDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEPLT 360
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
++ KV G +VGR+LD++ Y L +EL +MFDIKG L R+ W++V+ D E D
Sbjct: 694 KNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFDIKGLLEDAFRSGWQLVFVDKEDD 752
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++L+GDDPW F N V I I S +DV+KM
Sbjct: 753 VLLLGDDPWESFVNSVWYIKILSPEDVQKM 782
>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 714
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 176/381 (46%), Positives = 243/381 (63%), Gaps = 33/381 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQ------LEASTNQELNQRIPLFRLPSKILC 74
ELW ACAGP++ +PK+G V YFPQGH+EQ L AS N +PS + C
Sbjct: 33 ELWHACAGPMISLPKKGSVVVYFPQGHLEQHLHDFPLPASAN-----------IPSHVFC 81
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKV---------HSFS 124
RV+++ L AE+ +DEVY Q+ L+PE Q + AD H F
Sbjct: 82 RVLDVKLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDAEAVMKSTTPHMFC 141
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPR
Sbjct: 142 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPR 201
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV K+LV+GD +FLRGE+GEL +G+R A+ +S S +S Q
Sbjct: 202 RHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQGSPT 261
Query: 245 VLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
L +A++ + F ++Y PR +S+FII +++++++++ ++ GMR++MRFE ED+ E
Sbjct: 262 SLMDVVNALSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYSYSAGMRFRMRFETEDAAE 321
Query: 303 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
RRF+G +VG+ D P W S+WR L V+WD+ TR +RVSPWEIEP +++T N +
Sbjct: 322 RRFTGLIVGIADVDPVRWPGSRWRCLMVRWDD-LEATRHNRVSPWEIEPSGSASTANNL- 379
Query: 362 PVLAKNKRPRLSMEVPPLDLP 382
+ A KR ++ + LD P
Sbjct: 380 -MSAGLKRTKIGLPSAKLDFP 399
>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
Length = 524
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 245/363 (67%), Gaps = 15/363 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH Q+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTNKEVDAHIPNYPGLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ P + F K LTASD
Sbjct: 81 HNLTMHADVETDEVYAQMTLQPLSPQEQK---DVCLLPAELGIPSKLPTNYFCKTLTASD 137
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD +Q P QEL+AKDLHG EW+ +HIFRGQP+RHLLTTG
Sbjct: 138 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKLRHIFRGQPKRHLLTTG 197
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD +F+ EN +L +G+R R Q+ MP SV+SS SMH+G+LA A+H
Sbjct: 198 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPFSVLSSDSMHIGLLAAAAH 257
Query: 252 AVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 308
A AT T F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT
Sbjct: 258 ATATNTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYMGT 317
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+ G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P +
Sbjct: 318 ITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSLRL 375
Query: 368 KRP 370
KRP
Sbjct: 376 KRP 378
>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 180/342 (52%), Positives = 242/342 (70%), Gaps = 9/342 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 5 LNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 64
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKVLTASDTS 133
N+ + A+ ETDEVYAQ+TL P SQ++ PA+ + + + F K LTASDTS
Sbjct: 65 HNVTMHADVETDEVYAQMTLQPL-SQDDQKDAYLLPAELGTASKQPTNYFCKTLTASDTS 123
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A + P LD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 124 THGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 183
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 184 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAAHAA 243
Query: 254 ATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 244 ATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 303
Query: 311 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 304 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 345
>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
Length = 736
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 246/396 (62%), Gaps = 17/396 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L P LP + CRVV++
Sbjct: 52 ELWHACAGPVAPLPRKGSVVVYLPQGHIEHL-GDAAAAGGGAPPPVALPPHVFCRVVDVT 110
Query: 81 LMAEQETDEVYAQITLLPEPSQ---------NEPTTPDPCPADSPRPKV----HSFSKVL 127
L A+ TDEVYAQ+ L+ E + + D ++ + + H F K L
Sbjct: 111 LHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMFCKTL 170
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 230
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRG+NGEL +GVR A+ ++ + +Q ++LG L
Sbjct: 231 LTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNLGSLP 290
Query: 248 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+HAVAT+++F +YY PR SQ FII +K++++ + F+ G R+K+++E +D+ ERR
Sbjct: 291 NVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASERRC 350
Query: 306 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
+G + G+ D P W+ SKW+ L V+WD+ +P+R+SPWEIE +S + + + A
Sbjct: 351 TGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LTSSVSGSHMSAPNA 409
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
K +P L P +P+ + P A AQ H + Q
Sbjct: 410 KRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQ 445
>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
Length = 736
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 246/396 (62%), Gaps = 17/396 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L P LP + CRVV++
Sbjct: 52 ELWHACAGPVAPLPRKGSVVVYLPQGHIEHL-GDAAAAGGGAPPPVALPPHVFCRVVDVT 110
Query: 81 LMAEQETDEVYAQITLLPEPSQ---------NEPTTPDPCPADSPRPKV----HSFSKVL 127
L A+ TDEVYAQ+ L+ E + + D ++ + + H F K L
Sbjct: 111 LHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMFCKTL 170
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 230
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRG+NGEL +GVR A+ ++ + +Q ++LG L
Sbjct: 231 LTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNLGSLP 290
Query: 248 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+HAVAT+++F +YY PR SQ FII +K++++ + F+ G R+K+++E +D+ ERR
Sbjct: 291 NVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASERRC 350
Query: 306 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
+G + G+ D P W+ SKW+ L V+WD+ +P+R+SPWEIE +S + + + A
Sbjct: 351 TGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LTSSVSGSHMSAPNA 409
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
K +P L P +P+ + P A AQ H + Q
Sbjct: 410 KRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQ 445
>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
Length = 840
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 178/367 (48%), Positives = 238/367 (64%), Gaps = 24/367 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
E+W+ACAG L+ +P++G V YF QGH+EQ AS + + LP ++ CRV+N++
Sbjct: 29 EVWQACAGSLISLPRKGSVVVYFXQGHLEQAGASCDG--------WGLPPQVFCRVINVN 80
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---------SPRPKVHSFSKVLTASD 131
L A+Q +DEVYAQ++L P P E P+ + S H F K LTASD
Sbjct: 81 LHADQVSDEVYAQVSLTPIPEPVEKGLPEEEVREDGEEEFEFVSRSATPHMFCKTLTASD 140
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EW+F+HI+RGQPRRHLLTTG
Sbjct: 141 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHIYRGQPRRHLLTTG 200
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATAS 250
WS FV K+LVAGD +FLRGE+GEL +G+R R + S+PS + SQ++ A S
Sbjct: 201 WSVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGSVPSLALLSQNLSGSTFAAVS 260
Query: 251 HAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
AV+T+++F V Y PR S +FI+ KY + N +F++GMR+KM+ E ED+ ERR +G
Sbjct: 261 KAVSTKSVFHVSYNPRASPAEFIVPYWKYYKNFNQQFSLGMRFKMKIETEDTAERRCTGL 320
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+ GV D P W SKWR L V+WDE + R DRVSPWEI+ + + P + P
Sbjct: 321 ISGVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEID--LLGSVP-VFSPPATGL 377
Query: 368 KRPRLSM 374
KRPR+S+
Sbjct: 378 KRPRISL 384
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 21/201 (10%)
Query: 474 TPHPSKPNNDTLLEQVETGRKTETG---TSCRLFGIELINHATSSAPSEKVPVSSLTTE- 529
P P D ++ G+ T + CRLFG L +E+ P+S+ +
Sbjct: 606 APDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSL---------TEEPPLSNEAMDP 656
Query: 530 GHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQG 587
H+ ++S+ D + KS E Q K+S+SK CL T+NRS TKV QG
Sbjct: 657 AHV--SLSSNDDFNSKSSFQPSTWTVSCETQQ---KQSESKSQCLNKTANRSCTKVHKQG 711
Query: 588 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHE 646
VGRA++L+ GYD LI ELE +F+++G L+ K W++VYTD + DMMLVGDDPW E
Sbjct: 712 SMVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQE 771
Query: 647 FCNMVKRIFICSSQDVKKMSP 667
FCN+V +I I + +V+KM P
Sbjct: 772 FCNIVSKILIYTHDEVEKMIP 792
>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 180/407 (44%), Positives = 246/407 (60%), Gaps = 16/407 (3%)
Query: 8 LSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR 67
++ P S + ELW ACAGP+ +P++G V Y PQGH++ L P
Sbjct: 55 VATPPSRPSAVCLELWHACAGPVAPMPRKGSVVVYLPQGHLDHL--GDAPAHAAASPAAA 112
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSPRPKV-- 120
+P + CRVV++ L A+ TDEVYAQ++LLPE + E T D K
Sbjct: 113 VPPHVFCRVVDVTLHADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRF 172
Query: 121 ----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
H F K LTASDTSTHGGFS R+ A +C P LD NQ P+QELVAKDLHG EW+F+
Sbjct: 173 ARMPHMFCKTLTASDTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFR 232
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +GVR + ++ +
Sbjct: 233 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPAL 292
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMR 294
SQ +LG LA +HAV+T++MF ++Y PR SQ FI+ K+ ++++ F+VG R+KMR
Sbjct: 293 YSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSISQPFSVGWRFKMR 352
Query: 295 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 354
+E ED+ ERR++G + G D P W+ SKW+ L V+WD+ RP+R+SPWEIE A+
Sbjct: 353 YESEDAAERRYTGIITGTVDADPRWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIELTSAA 412
Query: 355 ATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
+ +L P +K +P L P +P P A AQ + Q
Sbjct: 413 SGSHLAAPT-SKRMKPYLPHANPEYTVPYGGGRPDFAESAQLRKVLQ 458
>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
Length = 946
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 197/398 (49%), Positives = 262/398 (65%), Gaps = 18/398 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKETDEIYAQMTLQPVHSETD-VFPIPSLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 277
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F +YY PRT S F+I L +Y +A + +VGMR+ M FE E+S +RR +GT+VG+ D+
Sbjct: 278 SFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESIKRRCTGTIVGISDY 337
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL- 372
P W +SKWR+L+V+WDE RP+RVS W+IE TP N+V P +KR L
Sbjct: 338 DPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE------TPENMVFPSPLNSKRQCLP 391
Query: 373 SMEVPPLDLPSA--ASAPWSARLAQSHNLTQLSVTAED 408
S VP L + S +S P A+ + NL Q+ + D
Sbjct: 392 SYAVPGLQIGSVNMSSIP-RAQGSPFGNLQQMPGSGSD 428
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 843 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGGSDWKLVYVDYEND 901
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 902 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 932
>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
Length = 903
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/338 (52%), Positives = 236/338 (69%), Gaps = 11/338 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 54 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDP----CPADSPRPKVHSFSKVLTASDTSTH 135
L A++++DE+YAQ++L P S+ + P P S P F K LTASDTSTH
Sbjct: 114 TLHADKDSDEIYAQMSLQPVHSERD-VFPVPDFGMLRGGSKHP-TEFFCKTLTASDTSTH 171
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 172 GGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLF 231
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V SKRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A
Sbjct: 232 VGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATAN 291
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+T F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+
Sbjct: 292 RTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGI 351
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 352 SDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 389
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T+ Y L +E MF ++G L + W++VY D E D
Sbjct: 794 RTYTKVQKTG-SVGRSIDVTSFKDYKELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 852
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 853 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 883
>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
Length = 795
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/368 (50%), Positives = 247/368 (67%), Gaps = 9/368 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E+ +P + LP +++C++
Sbjct: 10 LNSELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPGLPPQLICQL 69
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTH 135
++ + A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTH
Sbjct: 70 HDVTMHADAETDEVYAQMTLQPLSPQEQKDAFLPAELGIPTNQPTNYFCKTLTASDTSTH 129
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P+QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 130 GGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 189
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLV GD+ +F+ E +L +G+R AR Q+ MP SV+SS SMH+G+LA A+HA AT
Sbjct: 190 VSAKRLVTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGLLAAAAHAAAT 249
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+ISL KY++AV + +VGMR++M FE E+S RR+ GT+ +
Sbjct: 250 NSRFTVFYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSVRRYMGTITSI 309
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
D P W +S WRS+KV WDE + R RVS WEIEP + P+ + KRP
Sbjct: 310 SDLDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTTFPMYPSLFPL--RLKRPW 367
Query: 372 LSMEVPPL 379
L E+ PL
Sbjct: 368 LP-EMSPL 374
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G VGR+LD+ Y+ L DEL +MF ++G L R+ W++V D E D++L
Sbjct: 689 VKVYKSG-CVGRSLDIARFSSYNELRDELCQMFGLEGLLEDPQRSGWQLVLVDRENDILL 747
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM 665
+GDDPW F N V I I S QDV++M
Sbjct: 748 MGDDPWEAFVNSVWSIKILSPQDVQQM 774
>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
Length = 867
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/336 (51%), Positives = 235/336 (69%), Gaps = 8/336 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 52 ELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 111
Query: 80 HLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
L A++++DE+YAQ++L P S+ + P S P F K LTASDTSTHGG
Sbjct: 112 TLHADKDSDEIYAQMSLQPVHSERDVFPVPEFGLLRGSKHPS-EFFCKTLTASDTSTHGG 170
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 171 FSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVG 230
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SKRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 231 SKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRT 290
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
F+++Y PR ++F+I + KY +A+ ++ +V MR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 291 PFLIFYNPRACPAEFVIPIAKYRKAICGSQLSVSMRFGMMFETEDSGKRRYMGTIVGISD 350
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 351 LDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 386
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR---TKWEIVYTDDEG 634
R+ TKVQ G +VGR++D+T+ Y L +E MF ++G L TR + W++VY D E
Sbjct: 758 RTYTKVQKTG-SVGRSIDVTSFRDYKELKSAIECMFGLEGLL-TRPQSSGWKLVYVDYES 815
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
D++LVGDDPW EF VK I I S +V++MS
Sbjct: 816 DVLLVGDDPWEEFVGCVKCIRILSPTEVQQMS 847
>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
Length = 740
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/343 (49%), Positives = 226/343 (65%), Gaps = 22/343 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQL + + LP + CRVV++
Sbjct: 49 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPK----------VHSFSKVLTA 129
L AE TDEVYAQ++L+PE Q + AD + H F K LTA
Sbjct: 102 LHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTA 161
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLT
Sbjct: 162 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLT 221
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L
Sbjct: 222 TGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAV 281
Query: 250 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR++G
Sbjct: 282 VNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTG 341
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
+ G+ D P W SKWR L V+WD+ R +RVSPWEIE
Sbjct: 342 LITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 383
>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
Length = 955
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/376 (49%), Positives = 252/376 (67%), Gaps = 19/376 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++ +
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGS 277
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F +YY PRT S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG+ D+
Sbjct: 278 SFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGISDY 337
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR--- 369
P W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N +
Sbjct: 338 DPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKRQC 391
Query: 370 -PRLSMEVPPLDLPSA 384
P + VP +++ SA
Sbjct: 392 LPGYGVSVPGMEIGSA 407
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 852 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 941
>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
Length = 838
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 240/359 (66%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV Y PQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKEIDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
++ + A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTH
Sbjct: 80 HDVTMHADVETDEVYAQMTLQPLTQQEQKDAYVPTVLGFPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I K+ +AV + + +VGMR++M FE E+S RR+ GT+ G
Sbjct: 260 NSRFTIFYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESGVRRYMGTITGK 319
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS W+IEP + P P + KRP
Sbjct: 320 CDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPL--TTFPMYPSPFALRLKRP 376
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 646
VGR LD++ Y+ L ++ +MF ++GQL R+ W++V+ D E D +L+GD PW
Sbjct: 718 CVGRTLDISQFSSYEELRGKVADMFGLEGQLDDPLRSGWQLVFVDRENDALLLGDGPWEA 777
Query: 647 FCNMVKRIFICSSQDVKKM 665
F N V I I S D++ M
Sbjct: 778 FVNNVWYIKILSPHDIQMM 796
>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
Length = 950
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/337 (52%), Positives = 233/337 (69%), Gaps = 11/337 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + L S++LC+V N+
Sbjct: 45 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLASQLLCQVHNV 104
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 105 TLHADRDTDEIYAQMSLQPVNSEKDVF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHG 161
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 162 GFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 221
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E +L VGVR RQQ+++PS V+S+ SMH+GVLA A+HA A +
Sbjct: 222 GSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIGVLAAAAHAAANR 281
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S+F+I L KY +AV + +VGMR+ M FE E+S +RR+ GT+VG+
Sbjct: 282 SPFTIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGIS 341
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 342 DLDPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIE 378
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D++ Y+ L +E MF ++G L+ + W++VY D E D
Sbjct: 836 RTYTKVQKAG-SVGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLVYVDYEND 894
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF V+ I I S +V++MS
Sbjct: 895 VLLIGDDPWEEFVGCVRCIRILSPSEVQQMS 925
>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
Length = 780
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/341 (51%), Positives = 236/341 (69%), Gaps = 6/341 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPTLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+ L P + + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADLETDEVYAQMVLQPLTQEEQKDTFVPIELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLV GD+ +F+R E +L +G+R R Q+ +PSS++SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVTGDSVIFIRNERNQLLLGIRHATRPQTIVPSSMLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR +S+F++ L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 260 NSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGI 319
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S W +S WRS+KV WDE + R R S WEIEP
Sbjct: 320 GDLDSVLWPNSHWRSVKVGWDESTAGERQARASLWEIEPLT 360
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 646
+VGR+LD++ Y+ L +EL MFDIKG L R+ W++V+ D E D++L+GDDPW
Sbjct: 686 SVGRSLDISRFSSYNELREELGRMFDIKGLLEDAFRSGWQLVFVDKEDDILLLGDDPWES 745
Query: 647 FCNMVKRIFICSSQDVKKM---SPGSKLP 672
F N V I I S DV KM GS P
Sbjct: 746 FVNSVWYIKILSPDDVHKMGEHGEGSSFP 774
>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
Length = 833
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/358 (50%), Positives = 241/358 (67%), Gaps = 25/358 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPAD------------------SPR 117
++ + A+ ETDEVYAQ+TL P P + D C A+ S +
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQ 147
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+H
Sbjct: 148 P-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRH 206
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
IFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+S
Sbjct: 207 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 266
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMR 294
S SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV + + +VGMR++M
Sbjct: 267 SDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRML 326
Query: 295 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 327 FETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 384
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 732 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 790
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 791 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 831
>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
Length = 955
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/337 (52%), Positives = 235/337 (69%), Gaps = 11/337 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 40 ELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNYPNLPSQLLCQVHNI 99
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----HSFSKVLTASDTSTH 135
+ A++ETDEVYAQ+TL P N T P PA K F K LTASDTSTH
Sbjct: 100 TMHADKETDEVYAQMTLQPV---NSETDVFPIPALGSYAKSKHPPEYFCKNLTASDTSTH 156
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 157 GGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLF 216
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V +KRL AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++
Sbjct: 217 VGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIGVLAAAAHAASS 276
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F +YY PRT S F++ L +Y +A + +VGMR+ M FE E+S +RR++GT+VGV
Sbjct: 277 GSSFTIYYNPRTSPSPFVVPLARYNKANYVQQSVGMRFAMMFETEESSKRRYTGTIVGVS 336
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 337 DYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 373
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 934
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/337 (52%), Positives = 233/337 (69%), Gaps = 5/337 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + +IP + LPS++LC+V
Sbjct: 44 LNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQV 103
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N L A++ETDE+YAQ+TL P S+ E + F K LTASDTSTHG
Sbjct: 104 QNATLHADKETDEIYAQMTLQPLNSEREVFPISDFGLKHSKHPSEFFCKTLTASDTSTHG 163
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 164 GFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 223
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E +L VGVR + RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 224 GSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 283
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG+
Sbjct: 284 SPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGIS 343
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D P W SKWR+++V+WDEP + +RVS WEIE
Sbjct: 344 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 380
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 151/343 (44%), Gaps = 34/343 (9%)
Query: 344 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD----LPSAASAPWSARL------ 393
SPW ++P + S+ P+ +A+ ++ P LD L A+S P++ +
Sbjct: 589 SPWPMQPLIESSMPHPQMIGMAQADSAMVNGLFPQLDIDEWLAYASSQPFAGQNRPTGPF 648
Query: 394 --AQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFSSNSNFMSRTQSDGEWLTS--PRVK 447
Q HN Q V N+ W H K+ F S ++ ++ G + + P
Sbjct: 649 SDLQEHNSLQPQVVNPPLPSMNNEVWDHYVKNFKFLSQADQLTSICQPGMYGLNGVPSSN 708
Query: 448 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE--TGTSCRLFG 505
+ L E+ + ++ A + T + T+L++ T + E C
Sbjct: 709 NLRDLSAESNNQSEICVNVDASNSVGTTMVDPSTSSTILDEFCTMKDGEFQNPQDC---- 764
Query: 506 IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 565
++ + +SS + S+ E H +S G S +F E S
Sbjct: 765 --MVGNLSSSQDVQSQITSASLAESHAYPLRDIPDNSGGTSSSHVDFDES-------SFL 815
Query: 566 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--T 623
++ S Q R+ TKVQ G +VGR++D+TT Y+ LI +E MF + G L+ +
Sbjct: 816 QNNSWQQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGS 874
Query: 624 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
W++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 875 GWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 917
>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
Length = 451
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 209/292 (71%), Gaps = 4/292 (1%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P DDL RE+WKAC+G L+DV K G+RVYYFP+ H+EQLE S+NQEL +++ L LP
Sbjct: 17 PFKGDDDLCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPP 76
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
KILCRV++I L+ E ET+EVYA+ L+P QNEPT D P D+PRP+ SF K LT S
Sbjct: 77 KILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQS 136
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
D ++ G SV K A +C PPLDM Q P QEL+AKDL G EWRFKH +GQPRRH LT
Sbjct: 137 DIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTN 196
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q S+ +S S QSM + VLA AS
Sbjct: 197 GWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVAS 255
Query: 251 HAVATQTMFVVYYKP---RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
HA AT+++F VY KP ++SQFI+S++KY E N+ VGM +M+ E ED
Sbjct: 256 HAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESED 307
>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
Length = 816
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/341 (52%), Positives = 237/341 (69%), Gaps = 9/341 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 144
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRG P+RHLLTTGWS
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLLTTGWSV 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 255 TQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S +F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 264 TNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 323
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 324 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 364
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 715 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 773
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 669
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 774 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 810
>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
[Cucumis sativus]
Length = 730
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/377 (47%), Positives = 239/377 (63%), Gaps = 28/377 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL--FRLPSKILCRVVN 78
ELW ACAGPL +PK+G V Y PQGH EQ+ Q P + LP ILCRV++
Sbjct: 46 ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILCRVID 96
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV---------HSFSKVLTA 129
+ L AE +DEVYAQ++L PE Q E + DS V H F K LTA
Sbjct: 97 VQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTA 156
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDL G +W+F+HI+RGQPRRHLLT
Sbjct: 157 SDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLT 216
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS FV KRLV+GD +FLRG +GEL +G+R A+ +S S I SQ ++ +
Sbjct: 217 TGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSIMDV 276
Query: 250 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+AV++++ F V Y PR +SQF++ +K+L+++N+ F+VG+R+++ FE +D +RR +G
Sbjct: 277 VNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRRHTG 336
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA-SATPNLVQPVLA 365
+ GV D P W S+WRSL V+WD+ R RVSPWEIEP + S + NLV P L
Sbjct: 337 HITGVSDVDPIRWPGSRWRSLMVRWDD-GETNRHGRVSPWEIEPSGSVSLSTNLVPPGL- 394
Query: 366 KNKRPRLSMEVPPLDLP 382
KR R+ + L+ P
Sbjct: 395 --KRTRIGLSSTKLEFP 409
>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
Length = 954
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/337 (51%), Positives = 231/337 (68%), Gaps = 11/337 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G YYFPQGH EQ+ ST + +IP + LPS++LC+V N+
Sbjct: 46 ELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLLCQVQNV 105
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A++ETDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 106 TLHADKETDEIYAQMSLKPVNSEKDVF---PVPDFGLKPSKHPSEFFCKTLTASDTSTHG 162
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD P+QELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 163 GFSVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKRHLLTTGWSLFV 222
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+KRL AGD+ +F+R E +L +GVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 223 GAKRLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 282
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S+F+I L Y +A+ + +VGMR+ M FE E+S +RR+ GT+V
Sbjct: 283 SPFTIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGKRRYMGTIVSTS 342
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 343 DLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L+ + W++VY D E D
Sbjct: 840 RTYTKVQKTG-SVGRSIDVTSFKNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 898
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 899 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 929
>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
Length = 472
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 209/292 (71%), Gaps = 4/292 (1%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P DDL RE+WKAC+G L+DV K G+RVYYFP+ H+EQLE S+NQEL +++ L LP
Sbjct: 17 PFKGDDDLCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPP 76
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
KILCRV++I L+ E ET+EVYA+ L+P QNEPT D P D+PRP+ SF K LT S
Sbjct: 77 KILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQS 136
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
D ++ G SV K A +C PPLDM Q P QEL+AKDL G EWRFKH +GQPRRH LT
Sbjct: 137 DIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTN 196
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q S+ +S S QSM + VLA AS
Sbjct: 197 GWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVAS 255
Query: 251 HAVATQTMFVVYYKP---RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
HA AT+++F VY KP ++SQFI+S++KY E N+ VGM +M+ E ED
Sbjct: 256 HAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESED 307
>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
Length = 731
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/377 (47%), Positives = 239/377 (63%), Gaps = 28/377 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL--FRLPSKILCRVVN 78
ELW ACAGPL +PK+G V Y PQGH EQ+ Q P + LP ILCRV++
Sbjct: 46 ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILCRVID 96
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV---------HSFSKVLTA 129
+ L AE +DEVYAQ++L PE Q E + DS V H F K LTA
Sbjct: 97 VQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTA 156
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDL G +W+F+HI+RGQPRRHLLT
Sbjct: 157 SDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLT 216
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS FV KRLV+GD +FLRG +GEL +G+R A+ +S S I SQ ++ +
Sbjct: 217 TGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSIMDV 276
Query: 250 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+AV++++ F V Y PR +SQF++ +K+L+++N+ F+VG+R+++ FE +D +RR +G
Sbjct: 277 VNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRRHTG 336
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA-SATPNLVQPVLA 365
+ GV D P W S+WRSL V+WD+ R RVSPWEIEP + S + NLV P L
Sbjct: 337 HITGVSDVDPIRWPGSRWRSLMVRWDD-GETNRHGRVSPWEIEPSGSVSLSTNLVPPGL- 394
Query: 366 KNKRPRLSMEVPPLDLP 382
KR R+ + L+ P
Sbjct: 395 --KRTRIGLSSTKLEFP 409
>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
gi|224028907|gb|ACN33529.1| unknown [Zea mays]
gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
Length = 936
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 234/335 (69%), Gaps = 7/335 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGG
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHSSEYFCKNLTASDTSTHGG 158
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 159 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 218
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 219 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 278
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F VYY PRT S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+ D+
Sbjct: 279 SFTVYYNPRTSPSPFVIPLARYNTATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDY 338
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 339 EPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 929
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/337 (52%), Positives = 233/337 (69%), Gaps = 5/337 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + +IP + LP ++LC+V
Sbjct: 41 LNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPYQLLCQV 100
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L A++ETDE+YAQ+TL P S+ E + F K LTASDTSTHG
Sbjct: 101 QNVTLHADKETDEIYAQMTLQPLNSEREVFPISDFGHKHSKHPSEFFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 161 GFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E +L VGVR + RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 221 GSKRLRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 280
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG+
Sbjct: 281 SPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGIS 340
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D P W SKWR+++V+WDEP + +RVS WEIE
Sbjct: 341 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 377
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 508 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 567
++ + +SS + S+ TE H +S G S +F E S ++
Sbjct: 760 MVGNLSSSQDVQSQITSASLTESHAFPLRDIPDNSGGTSSSHVDFDES-------SFLQN 812
Query: 568 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKW 625
S Q R+ TKVQ G +VGR++D+TT Y+ LI +E MF + G L+ + W
Sbjct: 813 NSWQQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKCSGW 871
Query: 626 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 872 KLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 912
>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
Length = 836
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/334 (51%), Positives = 234/334 (70%), Gaps = 6/334 (1%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNIH 80
LW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 43 LWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVT 102
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPT-TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGFS
Sbjct: 103 LHADKDSDEIYAQMSLQPVHSERDVLPVPDLGLLRGSKHPSEYFCKTLTASDTSTHGGFS 162
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SK
Sbjct: 163 VPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSK 222
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F
Sbjct: 223 RLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPF 282
Query: 260 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
++++ PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 283 LIFFNPRACPAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLD 342
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 343 PLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK---WEIVYTDDEG 634
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L TR K W++VY D E
Sbjct: 730 RTYTKVQKTG-SVGRSIDVTSFRDYEELKTAIECMFGLEG-LLTRPKTSGWKLVYVDYES 787
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 788 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 819
>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
Length = 870
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 239/343 (69%), Gaps = 12/343 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+EL+ +IP + LP +++C +
Sbjct: 18 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRELDVQIPNYTSLPPQLICHL 77
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTT---PD-PCPADSPRPKVHSFSKVLTASDT 132
N+ + A+ ETDEVYAQ+TL P Q + + PD P+ P + F LTASDT
Sbjct: 78 HNVTMNADVETDEVYAQMTLQPLSLQEQKESYFVPDLGSPSKQPS---NYFCXTLTASDT 134
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFS+ R+ A + P LD Q P QEL A+DLH EW+F+HI+RGQP+RHLLTTGW
Sbjct: 135 STHGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRGQPKRHLLTTGW 194
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV++KRLVAGD+ +F+R ++G+L +G+R + + MPSSV+SS SMH+GVLA A+HA
Sbjct: 195 SVFVSAKRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSSVLSSDSMHIGVLAAAAHA 254
Query: 253 VATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AT + F ++Y PR S+F+I +KY +AV + + +VG+R++M FE E+S RR+ GT+
Sbjct: 255 AATNSPFNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETEESGVRRYMGTI 314
Query: 310 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
G+ D P W +S+WRSLKV WDE + R RVS WEIEP
Sbjct: 315 TGIGDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEPL 357
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 562 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH- 620
+SP+ + Q L + R+ TKV G ++GR++D+T GY L EL MF+++GQL
Sbjct: 723 ISPQAANLSQIHLPT-RTFTKVYKLG-SIGRSIDVTRFSGYPELRCELARMFNLEGQLED 780
Query: 621 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
R+ W++V+ D E D++L+GDDPW EF V+ I I S +V++M+
Sbjct: 781 CRSGWQLVFVDKENDVLLLGDDPWEEFVINVRYIKILSPPEVQQMT 826
>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
Length = 936
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 234/335 (69%), Gaps = 7/335 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGG
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGG 158
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 159 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 218
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 219 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 278
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F VYY PRT S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+ D+
Sbjct: 279 SFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDY 338
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 339 EPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
Length = 949
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 231/337 (68%), Gaps = 11/337 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G VYYFPQGH EQ+ ST + +IP + LPS+++C+V N+
Sbjct: 46 ELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVQNV 105
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A++++DE+YAQ++L P S+ + P RP H F K LTASDTSTHG
Sbjct: 106 TLHADKDSDEIYAQMSLQPVNSEKDVFL---VPDFGLRPSKHPNEFFCKTLTASDTSTHG 162
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 163 GFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 222
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+KRL AGD+ +F+R E +L +GVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 223 GAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 282
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S+F+I L KY + V + + GMR+ M FE E+S +RR+ GT+VG+
Sbjct: 283 SPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMGTIVGIS 342
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 343 DLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T+ YD L +E MF ++G L+ + W++VY D E D
Sbjct: 835 RTYTKVQKAG-SVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 893
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF + V+ I I S +V++MS
Sbjct: 894 VLLIGDDPWEEFVSCVRCIRILSPSEVQQMS 924
>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
Length = 935
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 234/335 (69%), Gaps = 7/335 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGG
Sbjct: 99 TLHADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 277
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F VYY PRT S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+ D+
Sbjct: 278 SFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDY 337
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 338 EPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 758
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/361 (51%), Positives = 240/361 (66%), Gaps = 10/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAG LV +P G RV YFPQGH+EQ+ AST +E + IP + LPS++ C +
Sbjct: 4 LNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLFCLL 63
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L A+ ETDEVYAQ+TLLP + + P + F K LTASDTSTHG
Sbjct: 64 DNVSLHADHETDEVYAQMTLLPIQNSEKEALLAPDSVIPNKQPSEYFCKTLTASDTSTHG 123
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFS+ R+ A + PPLD +S P QELVA+DLH +W F+HI+RGQPRRHLLTTGWS FV
Sbjct: 124 GFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLTTGWSVFV 183
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+ KRL AGD+ +F+R + L +G+R RQQS MPSSV+SS SMH GVLA ASHA AT
Sbjct: 184 SIKRLQAGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFGVLAAASHAAATS 243
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S+F+I L KY +A+ N + +GMR++M FE E+S R++ GT+ +
Sbjct: 244 SRFKIFYNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESNVRKYMGTITCIG 303
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRP 370
D P W S WRSLKV WDE + R RVS WEIEP + TP L+ PV ++KRP
Sbjct: 304 DLDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIEP---TPTPFLLCPPPVALRSKRP 360
Query: 371 R 371
+
Sbjct: 361 Q 361
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 580 RTKVQMQGV-AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDM 636
RT Q+ + +VGR+LD+ Y L EL F + + + + W+IV+ D+E D
Sbjct: 670 RTCFQVHKLGSVGRSLDVRNFSNYTELRQELARRFQLDCLMEDPSSSGWQIVFVDNEDDT 729
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
+L+GDDPW EF VK I I S +V +M
Sbjct: 730 LLLGDDPWEEFAKFVKTIKILSPSEVAQM 758
>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
Length = 471
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 237/393 (60%), Gaps = 57/393 (14%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ AS + IP + L +I CRVVN
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQF-ASFSPFKQLEIPNYDLQPQIFCRVVN 110
Query: 79 IHLMAEQETDEVYAQITLLPEPS---------------------QNEPTTPDPCPADSPR 117
+ L+A +E DEVY Q+TLLP+ PT P
Sbjct: 111 VQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTP------- 163
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
H F K LT SDTSTHGGFSV R+ A +C PPLD P+QELVAKDLHG EW+F+H
Sbjct: 164 ---HMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRH 220
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--------------GENGELHVGVRC 223
I+RGQPRRHLLTTGWS FV K LV+GD +FLR G+NGEL +G+R
Sbjct: 221 IYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRR 280
Query: 224 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 281
R ++ +P S++ +Q+ + L++ ++A++T++MF V+Y PR S +F++ KY++++
Sbjct: 281 AVRPRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSI 340
Query: 282 NNKFAVGMRYKMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITR 339
N +G R+KMR E ++SPERR SG ++G+ D P+ W SKWR L V+WD+
Sbjct: 341 KNPMTIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNH 400
Query: 340 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
DRVSPWEI+P ++P QP L+ PRL
Sbjct: 401 QDRVSPWEIDP----SSP---QPPLSIQSSPRL 426
>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
Length = 794
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/340 (51%), Positives = 234/340 (68%), Gaps = 6/340 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+N IP + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVNGHIPNYPSLSPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + + P P + + F K LTASDTSTH
Sbjct: 82 HNVTMHADMETDEVYAQMTLQPLNQQEQKDSYLPAELGVPSKQPTNYFCKTLTASDTSTH 141
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 142 GGFSVPRRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 201
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 202 VSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 261
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L+KY +AV + + + MR++M FE ++S RR+ G + G+
Sbjct: 262 NSRFTIFYNPRASPSEFVIPLSKYAKAVFHTRISDDMRFRMLFETDESSVRRYMGRITGI 321
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 322 SDLDPVRWSNSHWRSVKVIWDESTAGERQPRVSLWEIEPL 361
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ KV G +VGR+LD+ Y L +EL +MF + G+L R+ W++V+ D E D
Sbjct: 668 RTFVKVYKSG-SVGRSLDIAQFSSYHELREELGQMFGLGGKLRDPLRSGWQLVFVDREND 726
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEG 678
++L+GDDPW F N V I I S DV+ M P+ + G
Sbjct: 727 VLLLGDDPWESFVNNVWYIKILSPDDVQNMGKHDVEPLNPMGG 769
>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
Length = 648
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/312 (55%), Positives = 218/312 (69%), Gaps = 6/312 (1%)
Query: 1 MANRLGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE 58
M + LGS SQ D L RE+W+AC+G L+DVPK G+RV+YFP+ HM+QLE S+N E
Sbjct: 1 MVDLLGSNSQLKHFEGDNALCREIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLE 60
Query: 59 LNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP 118
Q + L LP KILCRV++I L+ E +T+EVYA+ LLP QNEP+TP+ CP + PRP
Sbjct: 61 WIQGLQLSHLPRKILCRVLHIRLLVEHDTEEVYAETILLPNQEQNEPSTPEFCPLEPPRP 120
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
+ SF K LT SD ++ G SV RK A +C PPLDM Q PTQEL+ DL G EWRFKH+
Sbjct: 121 QYQSFCKALTTSDIKSNWGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHV 180
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
F+GQPRRHLL GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q +S+ SS S
Sbjct: 181 FQGQPRRHLLKHGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSR 240
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKP---RTSQFIISLNKYLEAVNNKFAVGMRYKMRF 295
QSM GVLA ASHA AT+++F VYYKP R+SQFI+SL+ Y E N+ VG + +
Sbjct: 241 QSME-GVLAVASHAFATRSLFSVYYKPCYNRSSQFIMSLSNYFEGGNHGPGVGTISRTQH 299
Query: 296 EGEDSPERRFSG 307
DS +R SG
Sbjct: 300 TSLDSHVKRTSG 311
>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
Length = 1107
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/357 (50%), Positives = 245/357 (68%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ ++P + L SK+LC + N+
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKLLCLLHNV 89
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TLLP PS + S +P+ F K LTASDTSTHGGF
Sbjct: 90 TLHADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGF 149
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 150 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 209
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 210 KRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 269
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 270 FTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGISDL 329
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 330 DPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 736
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/377 (46%), Positives = 243/377 (64%), Gaps = 25/377 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH E ++ + + + +P + CRV+++
Sbjct: 53 ELWHACAGPLISLPKKGSVVVYLPQGHFEHVQ-------DFPVTAYDIPPHVFCRVLDVK 105
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------HSFSKVLTAS 130
L AE+ +DEVY Q+ L+PE Q E + + AD H F K LTAS
Sbjct: 106 LHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIVKSTTPHMFCKTLTAS 165
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 166 DTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTT 225
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++GEL +G+R A+ +S+ +V S Q ++ L
Sbjct: 226 GWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPATLKGVV 285
Query: 251 HAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+A++T+ F V Y PR +S+FII ++K+L++++ ++VGMR++MRFE ED+ ERR +G
Sbjct: 286 NALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAERRCTGL 345
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVLAK 366
+ G+ D P W SKWR L V+WD+ R +RVSPWEIEP AS + NL+ L
Sbjct: 346 IAGISDVDPVRWLGSKWRCLLVRWDD-IEAARRNRVSPWEIEPSGSASNSSNLMSAGL-- 402
Query: 367 NKRPRLSMEVPPLDLPS 383
KR R+ M L+ P+
Sbjct: 403 -KRTRIGMTSVKLEFPT 418
>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
Length = 925
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 237/343 (69%), Gaps = 11/343 (3%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKIL 73
S+ + ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS+++
Sbjct: 16 SEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLM 75
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTAS 130
C+V N+ L A+++TDE+YAQ++L P S+ + P P +P H F K LTAS
Sbjct: 76 CQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTAS 132
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTT
Sbjct: 133 DTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTT 192
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+
Sbjct: 193 GWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAA 252
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSG 307
HA A ++ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ G
Sbjct: 253 HAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMG 312
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
T+VG+ D P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 313 TIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 355
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 815 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 873
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 874 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 904
>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 234/359 (65%), Gaps = 11/359 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G +V YFPQGH EQ+ ST +E + IP + L ++C + N+
Sbjct: 38 ELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLRPHLICTLENV 97
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETD+VYAQ+ L+P + T P + F K LTASDTSTHGGFS
Sbjct: 98 TLHADLETDDVYAQMVLIPTQDPEKETMLLPDVVVQNKQPTEYFCKTLTASDTSTHGGFS 157
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR-GQPRRHLLTTGWSTFVTS 198
+ R+ A + P LD Q P QELVA+DLH +W F+HI+R GQPRRHLLTTGWS F+++
Sbjct: 158 IPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSIFISA 217
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD +F+R + G+L +G+R R Q+ MPSSV+SS SMH+G+LA ASHA T +
Sbjct: 218 KRLQAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIGILAAASHAAQTSSR 277
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S+F+I KY +AV + + VGMR++M FE E+S RR+ GTV G+ D
Sbjct: 278 FTIFYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEESTVRRYMGTVTGIGDL 337
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 371
P W +S WRSLKV WDE + R RVS WEIEP TP L+ P++ ++KR R
Sbjct: 338 DPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPL---TTPFLICPPPIVLRSKRAR 393
>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
Length = 947
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/337 (51%), Positives = 234/337 (69%), Gaps = 11/337 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS+++C+V N+
Sbjct: 44 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVHNV 103
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 104 TLHADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTTGWS FV
Sbjct: 161 GFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
++KRL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 221 SAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANR 280
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG+
Sbjct: 281 SPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGTIVGIS 340
Query: 314 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 341 DLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 377
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 837 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 895
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 896 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 926
>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
Length = 712
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/379 (45%), Positives = 236/379 (62%), Gaps = 20/379 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH+EQ+ + + LP + CRVV++
Sbjct: 41 ELWHACAGPLISLPKKGTVVVYLPQGHLEQVS-------DFPTSAYDLPPHLFCRVVDVK 93
Query: 81 LMAEQETDEVYAQITLLPEP---------SQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
L AE TD+V+AQ++L+PE + + + A H F K LTASD
Sbjct: 94 LHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTPHMFCKTLTASD 153
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTG
Sbjct: 154 TSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTG 213
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV K+LV+GD +FLRG++GEL +G+R A+ +SS + SQ ++ + +
Sbjct: 214 WSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLNYSTVTDVVN 273
Query: 252 AVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AV+T+ F VYY PR +S+FII K+L ++++ F+ GMR+KMRFE ED+ ERR++G +
Sbjct: 274 AVSTKNAFNVYYNPRASSSEFIIPSRKFLRSLDHCFSAGMRFKMRFETEDAAERRYTGLI 333
Query: 310 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 368
G+ P W SKW+ L V+WD+ ++ RVSPWEIEP + ++ + + K
Sbjct: 334 TGIGALDPIRWPGSKWKCLVVRWDD-IDTSKHGRVSPWEIEPSGSVSSSHSLMGTGLKRS 392
Query: 369 RPRLSMEVPPLDLPSAASA 387
R LS P +P+ A
Sbjct: 393 RIGLSATKPEFPVPNGNGA 411
>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 728
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 178/379 (46%), Positives = 240/379 (63%), Gaps = 29/379 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL--FRLPSKILCRVVN 78
ELW ACAGPL+ +PK+G V Y PQGH E + Q P+ F +P + CRV++
Sbjct: 44 ELWHACAGPLISLPKRGSVVVYLPQGHFEHV---------QDFPVNAFDIPPHVFCRVLD 94
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------HSFSKVLT 128
+ L AE+ +DEVY Q+ L+PE Q E + + AD H F K LT
Sbjct: 95 VKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTPHMFCKTLT 154
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 155 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLL 214
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV K+LV+GD +FLRG +GEL +G+R A+ + + +V S Q ++ L
Sbjct: 215 TTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVPSGQQLNPATLMD 274
Query: 249 ASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
+A++T+ F V Y PR + FII ++K+LE+++ ++VGMR++MRFE ED+ +RRF+
Sbjct: 275 VVNALSTRCAFSVCYNPRYFSXXFIIPVHKFLESLDCSYSVGMRFRMRFETEDAADRRFT 334
Query: 307 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVL 364
G + G+ D P W SKWR L V+WD+ R +RVSPWEIEP AS + NL+ L
Sbjct: 335 GLIAGISDVDPVRWPGSKWRCLLVRWDD-IEAARHNRVSPWEIEPSGSASNSSNLMAAGL 393
Query: 365 AKNKRPRLSMEVPPLDLPS 383
KR R+ M L+ P+
Sbjct: 394 ---KRNRIEMTSAKLEFPN 409
>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
Length = 1099
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/380 (50%), Positives = 254/380 (66%), Gaps = 14/380 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPSK+LC + N+
Sbjct: 27 ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKRDVDAQIPNYPNLPSKLLCLLHNV 86
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E S +P+ F K LTASDTSTHGGF
Sbjct: 87 TLHADPETDEVYAQMTLQPVSSFDKEALLRSDLSLKSNKPQPEFFCKTLTASDTSTHGGF 146
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + TP QELVA+DLH W+F+HI+RG+P+RHLLTTGWS FV+
Sbjct: 147 SVPRRAAEKIFPPLDFSMQTPAQELVARDLHENVWKFRHIYRGKPKRHLLTTGWSLFVSG 206
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 207 KRLFAGDSVLFIRDETQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 266
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +AV N++ + GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 267 FTVFYNPRASLSEFVIPLAKYYKAVYNHQISPGMRFRMMFETEESGTRRYMGTITGISDI 326
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR-- 371
P WK+S+WR+L+V WDE + R +RVS WEIEP A P + P L ++KRPR
Sbjct: 327 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA---PFFICPSPLFRSKRPRQP 383
Query: 372 --LSMEVPPLDLPSAASAPW 389
L+ E LD PW
Sbjct: 384 GMLADEYSDLDNLFKRPMPW 403
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWKLVYVDHEND 1045
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 VLLVGDDPWEEFINCVRCIKILSPQEVQQMS 1076
>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
Length = 1107
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/357 (50%), Positives = 244/357 (68%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ ++P + L SK+LC + N+
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKLLCLLHNV 89
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TLLP S + S +P+ F K LTASDTSTHGGF
Sbjct: 90 TLHADPETDEVYAQMTLLPVLSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGF 149
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 150 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 209
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 210 KRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 269
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 270 FTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGISDL 329
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 330 DPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
Length = 945
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 231/335 (68%), Gaps = 7/335 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LP ++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A++ETDE+Y Q+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKETDEIYCQMTLQPLHSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 277
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F +YY PRT S F+I L +Y +A + +VGMR+ M FE E+S +RR +G +VG+ D+
Sbjct: 278 SFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESSKRRCTGAIVGISDY 337
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 338 DPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR +D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 842 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 900
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 901 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 931
>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 234/342 (68%), Gaps = 16/342 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS+++C+V N+
Sbjct: 45 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVHNV 104
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 105 TLHADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHG 161
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTTGWS FV
Sbjct: 162 GFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTGWSVFV 221
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
++KRL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 222 SAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANR 281
Query: 257 TMFVVYYKPR-------TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 308
+ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT
Sbjct: 282 SPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGT 341
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
+VG+ D P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 342 IVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 383
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 797 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 855
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 856 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 886
>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
Length = 714
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/399 (44%), Positives = 246/399 (61%), Gaps = 29/399 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQL + + ++ LPS + CRVV++
Sbjct: 49 ELWHACAGPLISLPKRGSVVVYFPQGHLEQLP-------DLPLAVYDLPSHVFCRVVDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTAS 130
L AE +DEVYAQ++L+PE + E + A H F K LTAS
Sbjct: 102 LHAEAASDEVYAQVSLVPESEEIEQKLREGIFEGDGEEEDGEATVKMTTPHMFCKTLTAS 161
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTT 221
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRGE+GEL +GVR A+ + + ++ +
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPAQWNHQLNQISPGDVA 281
Query: 251 HAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+A++T++ F +YY PR +S+FII NK+L++++ F+ GMR+KMRFE ED+ ERR++G
Sbjct: 282 NAISTRSFFHIYYNPRASSSEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDAAERRYTGI 341
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP---NLVQPVL 364
+ GV + P W SKW+ L V+WD+ + R RVSPWE+EP + + N + P L
Sbjct: 342 ITGVSELDPARWPGSKWKCLLVRWDDREA-NRLSRVSPWEVEPSGSGSISSSNNFMAPGL 400
Query: 365 AKNKR--PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
+++ P E P +P AP ++S + Q
Sbjct: 401 KRSRSGLPSSKAEFP---IPDGIGAPGFRESSRSQEVLQ 436
>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
Length = 826
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/374 (48%), Positives = 246/374 (65%), Gaps = 17/374 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
+ + LW CAGPL+ +P G +V YFPQGH EQ+ AST++E + +P + LP ++ C +
Sbjct: 15 INQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQLFCIL 74
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTST 134
NI L A+QE DEV+AQ+TL P P P + K + SFSK LTASDTST
Sbjct: 75 HNITLHADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTASDTST 134
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFS+ R+ A + PPLD ++ P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS
Sbjct: 135 HGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLTTGWSV 194
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGDT +FLR E G+ +G+R RQQ+++P+S++SS SM +GVLA A+HA +
Sbjct: 195 FVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAAAHAAS 254
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY +A++ + VGMR++M E EDS RR+ GT+ G
Sbjct: 255 TNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYMGTITG 314
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNK 368
+ D P W +S WRSLKV WDE + + RVS WEIEP P L+ L ++K
Sbjct: 315 IGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLT---VPFLLCNSSFLLRSK 371
Query: 369 RPR-----LSMEVP 377
RPR L M+ P
Sbjct: 372 RPRGTEEELQMKAP 385
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 564 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 623
P+ S +Q R+ TKV G +VGR+LD+T Y L +EL MF ++ ++
Sbjct: 649 PQPSWPQQVYPPPVRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHD--HKS 705
Query: 624 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
W++V+ D+E DM+L+GDDPW EF VK I I SS ++ +M+
Sbjct: 706 GWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMN 748
>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
Length = 832
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/359 (50%), Positives = 243/359 (67%), Gaps = 8/359 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ P + L +++C++
Sbjct: 24 LNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHTPNYPSLQPQLICQL 83
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + + P R + F K LTASDTSTH
Sbjct: 84 HNVTMHADVETDEVYAQMTLQPLNAQEQKDSYLAAELGVPSRQPTNYFCKTLTASDTSTH 143
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 144 GGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 203
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA T
Sbjct: 204 VSAKRLVAGDSVLFIWNDKNQLLLGIRRAHRPQTVMPSSVLSSDSMHLGLLAAAAHAAPT 263
Query: 256 QTMFVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR TS+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 264 NSRFTIFYNPRASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 323
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
D P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 324 CDLDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 380
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLV 639
KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ E
Sbjct: 709 KVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGQLEDPVRSGWQLVFVGRE------ 761
Query: 640 GDDPWHEFCNMVKRIFICSSQDVKKM 665
EF + V I I S Q+V++M
Sbjct: 762 ------EFVSSVWCIKILSPQEVQQM 781
>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
Length = 835
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 242/363 (66%), Gaps = 12/363 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
+ + LW CAGPL+ +P G +V YFPQGH EQ+ AST++E + +P + LP ++ C +
Sbjct: 15 INQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQLFCIL 74
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTST 134
NI L A+QE DEV+AQ+TL P P P + K + SFSK LTASDTST
Sbjct: 75 HNITLHADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTASDTST 134
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFS+ R+ A + PPLD ++ P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS
Sbjct: 135 HGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLTTGWSV 194
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGDT +FLR E G+ +G+R RQQ+++P+S++SS SM +GVLA A+HA +
Sbjct: 195 FVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAAAHAAS 254
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
T + F ++Y PR S+F+I L KY +A++ + VGMR++M E EDS RR+ GT+ G
Sbjct: 255 TNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYMGTITG 314
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNK 368
+ D P W +S WRSLKV WDE + + RVS WEIEP P L+ L ++K
Sbjct: 315 IGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLT---VPFLLCNSSFLLRSK 371
Query: 369 RPR 371
RPR
Sbjct: 372 RPR 374
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 564 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 623
P+ S +Q R+ TKV G +VGR+LD+T Y L +EL MF ++ ++
Sbjct: 661 PQPSWPQQVYPPPVRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHD--HKS 717
Query: 624 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
W++V+ D+E DM+L+GDDPW EF VK I I SS ++ +M+
Sbjct: 718 GWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMN 760
>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
Length = 1112
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 181/360 (50%), Positives = 245/360 (68%), Gaps = 11/360 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPSK++C + NI
Sbjct: 31 ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLVCLLHNI 90
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ E DEVYAQ+TL P PS E + +P+ F K LTASDTSTHGGF
Sbjct: 91 TLHADPEADEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQTEFFCKTLTASDTSTHGGF 150
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 151 SVPRRSAEKIFPPLDYSMQPPAQELVARDLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSG 210
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 211 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 270
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +A +++ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 271 FTVFYNPRASHSEFVIPLAKYYKATYSSQVSLGMRFRMMFETEESGTRRYMGTITGISDL 330
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV--LAKNKRPRL 372
P WK+S+WR+L+V WDE + R +RVS WEIEP A P + P ++KRPRL
Sbjct: 331 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA---PFFICPTPPFFRSKRPRL 387
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 1001 RTFTKVHKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1059
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V+++S
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQIS 1090
>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 180/357 (50%), Positives = 244/357 (68%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPS++LC + N+
Sbjct: 29 ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 88
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGF
Sbjct: 89 TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 148
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 149 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 208
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 209 KRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 268
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 269 FTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 328
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 329 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 383
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 922 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 980
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 981 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1011
>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
Length = 1117
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 180/357 (50%), Positives = 244/357 (68%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPS++LC + N+
Sbjct: 31 ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 90
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGF
Sbjct: 91 TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 150
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 151 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 210
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 211 KRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 270
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 271 FTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 330
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 331 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 385
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 1005 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1063
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1064 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1094
>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 164/343 (47%), Positives = 224/343 (65%), Gaps = 21/343 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH+EQL + + ++ LP + CRVV++
Sbjct: 49 ELWHACAGPLISLPKRGSIVVYVPQGHLEQLP-------DLPLGIYDLPPHVFCRVVDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTAS 130
L AE +D+VYAQ++L+PE + E + A H F K LTAS
Sbjct: 102 LHAEAASDDVYAQVSLVPESEEIEQKLREGVFEGDGEEEDVEATVKTTTPHMFCKTLTAS 161
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTT 221
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRGE+GEL +GVR A+ + + +Q ++ LA +
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQQLNQSSLADVA 281
Query: 251 HAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+A++ ++ F +YY PR +S+FII NK+L++++ F+ GMR KMRFE ED+ ERR++G
Sbjct: 282 NAISMRSAFRIYYNPRASSSEFIIPFNKFLKSLDQSFSAGMRVKMRFETEDAAERRYTGL 341
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
+ G+ + P W SKW+ L V+WD+ R RVSPWE+EP
Sbjct: 342 ITGISELDPTRWPGSKWKCLLVRWDD-TEANRHSRVSPWEVEP 383
>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
Length = 952
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/347 (49%), Positives = 233/347 (67%), Gaps = 9/347 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ IP + LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDT-IPSYPSLPSKLICKLLSL 82
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGF
Sbjct: 83 TLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTASDTSTHGGF 142
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R +R Q ++ SSV+S SMH+G+LA A+HA A +
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCDSMHIGILAAAAHAAANSSP 262
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLD 322
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 323 PLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL RT W++VY D E D
Sbjct: 838 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 896
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 897 ILLVGDDPWEEFVSCVKSIKILSSAEVQQMS 927
>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
Length = 898
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 236/343 (68%), Gaps = 23/343 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV ASTN+E++ +IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRV-----------AASTNKEVDSQIPNYPSLPPQLICQL 68
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP-CPADSPRPK---VHSFSKVLTASDT 132
N+ + A+ ETDEVYAQ+TL P +Q + DP PAD P + F K LTASDT
Sbjct: 69 HNVTMHADVETDEVYAQMTLQPLSAQEQK---DPYLPADLGTPSKQPTNYFCKTLTASDT 125
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSV R+ A + PPLD +Q P QELVA+DLHG EW+F+HIFRGQP+RHLLTTGW
Sbjct: 126 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTTGW 185
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV++KRLVAGD+ +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 186 SVFVSAKRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHA 245
Query: 253 VATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 309
AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 246 AATNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 305
Query: 310 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
G+ D P W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 306 TGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL 348
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 646
+ GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW E
Sbjct: 774 SFGRSLDITRFSSYHELRSELGHLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQE 833
Query: 647 FCNMVKRIFICSSQDVKKM 665
F N V I I S ++V++M
Sbjct: 834 FVNSVSCIKILSPEEVQQM 852
>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
Length = 935
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/335 (53%), Positives = 233/335 (69%), Gaps = 8/335 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGG
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGG 158
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+R QP+RHLLTTGWS FV
Sbjct: 159 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 277
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F VYY PRT S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+ D+
Sbjct: 278 SFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDY 337
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 338 EPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
Length = 1084
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/337 (50%), Positives = 228/337 (67%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + +P + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE-TECVPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R V F K LTASDTSTHGGF
Sbjct: 82 TLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF- 315
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ +
Sbjct: 262 FTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELD 321
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
+ WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 322 AARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 957 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1015
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1016 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1046
>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
Length = 1109
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 179/360 (49%), Positives = 245/360 (68%), Gaps = 8/360 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
+ +ELW+ACAGPLV +P G V YFPQGH EQ+ AS ++++ +IP + LPSK+ C +
Sbjct: 32 INQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLFCLL 91
Query: 77 VNIHLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
N+ L A+ ETDEVYAQ+TL P PS + S +P+ F K LTASDTSTH
Sbjct: 92 HNVTLHADPETDEVYAQMTLQPVPSFDKDALLRSDLTLKSNKPQTDFFCKTLTASDTSTH 151
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 152 GGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 211
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRL AGD+ +F+R + +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A
Sbjct: 212 VSGKRLFAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 271
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I L KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 272 NSPFTVFYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYMGTITGI 331
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
D P WK+S+WR+L+V WDE + + +RVS WEIEP A + P ++KRPR
Sbjct: 332 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 389
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GY L +L F I+GQL R + W++VY D E D
Sbjct: 997 RTYTKVYKRG-AVGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1055
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1056 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1086
>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
Length = 1113
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/339 (51%), Positives = 233/339 (68%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS +++N +IP + LPSK+LC + N+
Sbjct: 26 ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASLKKDVNAQIPNYPNLPSKLLCLLHNV 85
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVY Q+TL P S + S +P+ F K LTASDTSTHGGF
Sbjct: 86 TLHADPETDEVYVQMTLQPVSSFDKDALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 145
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 146 SVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 205
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 206 KRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 265
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F VYY PR S+F+I L KY +AV +N+ ++GMR++M FE E+S RR GT+ G+ D
Sbjct: 266 FTVYYNPRASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESGTRRHMGTITGISDL 325
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
WK+S+WR+L+V WDE + R +RVS WEIEP A
Sbjct: 326 DAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA 364
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R W++VYTD E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHEND 1059
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/337 (50%), Positives = 228/337 (67%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + +P + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE-TECVPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R V F K LTASDTSTHGGF
Sbjct: 82 TLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF- 315
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ +
Sbjct: 262 FTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELD 321
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
+ WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 322 AARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 751 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 809
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 810 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 840
>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
Length = 682
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/376 (46%), Positives = 234/376 (62%), Gaps = 24/376 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH EQ N +P + CRV+++
Sbjct: 53 ELWHACAGPLISLPKKGSIVVYVPQGHFEQAHDFPVSACN-------IPPHVFCRVLDVK 105
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC-PADSPRPKV---------HSFSKVLTAS 130
L AE+ +DEVY Q+ L+PE Q E + AD+ H F K LTAS
Sbjct: 106 LHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKSTTPHMFCKTLTAS 165
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 166 DTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRHIYRGQPRRHLLTT 225
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRGE+GEL +G+R + +SS +S + G L
Sbjct: 226 GWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGLSGMQLDPGSLMDVV 285
Query: 251 HAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+A++ ++ F V Y PR +S+FII +NK+L++++ ++ GMR++MRFE ED+ ERRF+G
Sbjct: 286 NALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETEDAAERRFTGL 345
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVLAK 366
+ G+ D P W SKW+ L V+WD+ + +RVSPWEIEP AS + NL+ L
Sbjct: 346 IAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSASNSSNLMAASL-- 403
Query: 367 NKRPRLSMEVPPLDLP 382
KR R+ L+ P
Sbjct: 404 -KRTRIGFTSAKLEFP 418
>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
protein 2; AltName: Full=OsETTIN2
gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
Length = 718
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 240/394 (60%), Gaps = 19/394 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L A+ P +P + CRVV++
Sbjct: 39 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSG-----PGAAVPPHVFCRVVDVS 93
Query: 81 LMAEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTA 129
L A+ TDEVYAQ++L+ E E C + P H F K LTA
Sbjct: 94 LHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTA 153
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD + P QELVAKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLT 213
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS F+ K+LV+GD +FLRGE+GEL +GVR A+ +++ P + +Q + L+
Sbjct: 214 TGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEV 273
Query: 250 SHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+HAVA +++F +YY PR SQ FII K++ + + F+VGMR+K+R+E ED+ ERR +G
Sbjct: 274 AHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTG 333
Query: 308 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
++G + P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K
Sbjct: 334 IIIGSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSKR 392
Query: 368 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
+ P + LP+ + + A A+ H + Q
Sbjct: 393 LKSCFPQVNPDIVLPNGSVSSDFAESARFHKVLQ 426
>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
Length = 831
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 170/372 (45%), Positives = 227/372 (61%), Gaps = 51/372 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQL + + LP + CRVV++
Sbjct: 49 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK----------VHSFSKVLTAS 130
L AE TDEVYAQ++L+PE + AD + H F K LTAS
Sbjct: 102 LHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTAS 161
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTT 221
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVV 281
Query: 251 HAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR++G
Sbjct: 282 NAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGL 341
Query: 309 VVGVEDFSP-HWKDSKWR------------------------------SLKVQWDEPASI 337
+ G+ D P W SKWR SL+V+WD+
Sbjct: 342 ITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDD-IEA 400
Query: 338 TRPDRVSPWEIE 349
R +RVSPWEIE
Sbjct: 401 NRHNRVSPWEIE 412
>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 955
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/381 (48%), Positives = 253/381 (66%), Gaps = 19/381 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 44 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNYPSLPSQLLCQVHNI 103
Query: 80 HLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+ A+++TDEVYAQ+TL P S+ + P A S P + F K LTASDTSTHGG
Sbjct: 104 TMHADKDTDEVYAQMTLQPVNSETDVFPIQSLGSYAKSKHPAEY-FCKNLTASDTSTHGG 162
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 163 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 222
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR QQ+++ SSV+S+ SMH+GVLA A+HA ++ +
Sbjct: 223 AKRLKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIGVLAAAAHAASSGS 282
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F +YY PRT S F++ + +Y +A+ + +VGMR M E E+S +RR +GT+VGV D
Sbjct: 283 SFTIYYNPRTSPSPFVVPMTRYNKAIYIQQSVGMRIAMMSETEESGKRRHTGTIVGVSDS 342
Query: 316 SP-HWKDSKWRSLKVQWD--EPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKRP 370
P W +SKWR+L+V+WD E RP+RVS W+IE TP +V P + N +
Sbjct: 343 DPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIE------TPENTIVLPSASLNSKR 396
Query: 371 RL--SMEVPPLDLPSAASAPW 389
+ VP L++ SA +P+
Sbjct: 397 QCLPGYGVPGLEVASANMSPF 417
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPASSDWKLVYVDYEND 909
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 221/291 (75%), Gaps = 4/291 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP+ G +V+YFPQGH+EQ+ A N++ +P++ LP KILC+VV
Sbjct: 1 LYTELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIYDLPYKILCKVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDTSTH 135
++ L AE +TDEV+A ITLLP +E ++ + + +V SF+K LT SDTST
Sbjct: 61 HVQLKAEAKTDEVFAHITLLPVAEGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDTSTQ 120
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV ++HA E LPPLD +Q P QEL+AKDLHG EWRF+HI+RGQP+RHLLT GWSTF
Sbjct: 121 GGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGWSTF 180
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
++SKR+VAGD+F+FLRGE+GEL VGVR + ++++ ++V+++ SM LG+L++ASHA++T
Sbjct: 181 ISSKRVVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGILSSASHAIST 240
Query: 256 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
++F +++ P TS +FII ++Y+++ ++++G R+ M+FEGE+ E+R
Sbjct: 241 GSIFTIFFHPWTSPAEFIIPFDQYMKSAEIEYSIGTRFIMQFEGEECTEQR 291
>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
Length = 1143
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/339 (50%), Positives = 231/339 (68%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 35 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHVPSYPNLPSKLICLLHNV 94
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TLLP S E PRP+ F K LTASDTSTHGGF
Sbjct: 95 TLHADPETDEVYAQMTLLPVTSYGKEALQLSELALKQPRPQTEFFCKTLTASDTSTHGGF 154
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 155 SVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 214
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 215 KRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 274
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F++ KY +A+ N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 275 FTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGISDL 334
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
P WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 335 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 373
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GYD L L MF ++GQL R + W++VY D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDISQFNGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 1068
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
Length = 608
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/375 (45%), Positives = 230/375 (61%), Gaps = 22/375 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 106
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G
Sbjct: 287 HAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGI 346
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+ G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTTGP 404
Query: 368 KRPRLSMEVPPLDLP 382
KR R+ + D+P
Sbjct: 405 KRSRIGISSGKPDIP 419
>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1097
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 176/341 (51%), Positives = 234/341 (68%), Gaps = 6/341 (1%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E + IP + LPSK++C
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSKLICM 77
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL P + E R F K LTASDTST
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTST 137
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSV 197
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 257
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 318 SDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 608
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/375 (45%), Positives = 229/375 (61%), Gaps = 22/375 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 106
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G
Sbjct: 287 HAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGI 346
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+ G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTTGP 404
Query: 368 KRPRLSMEVPPLDLP 382
KR R+ D+P
Sbjct: 405 KRSRIGFSSGKPDIP 419
>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
Length = 608
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 170/375 (45%), Positives = 229/375 (61%), Gaps = 22/375 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 106
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G
Sbjct: 287 HAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGI 346
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
+ G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTTGP 404
Query: 368 KRPRLSMEVPPLDLP 382
KR R+ D+P
Sbjct: 405 KRSRIGFSSGKPDIP 419
>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
Length = 1081
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 176/341 (51%), Positives = 234/341 (68%), Gaps = 6/341 (1%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E + IP + LPSK++C
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSKLICM 77
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL P + E R F K LTASDTST
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTST 137
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSV 197
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 257
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 318 SDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
Length = 958
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 231/348 (66%), Gaps = 20/348 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LP ++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A++ETDE+Y Q+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKETDEIYCQMTLQPLHSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLP-------------PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
FSV R+ A + P P D + P QEL+ +DLH W F+HI+RGQP+
Sbjct: 158 FSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPK 217
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+G
Sbjct: 218 RHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG 277
Query: 245 VLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
VLA A+HA ++ F +YY PRT S F+I L +Y +A + +VGMR+ M FE E+S +
Sbjct: 278 VLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESSK 337
Query: 303 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
RR +G +VG+ D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 338 RRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 385
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR +D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 855 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 913
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 914 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 944
>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
Length = 1123
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/357 (49%), Positives = 234/357 (65%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 12 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 71
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 72 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 131
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 132 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 191
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 192 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 251
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 252 FTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDL 311
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 312 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 366
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 989 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1047
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1048 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1078
>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
Length = 1138
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/357 (49%), Positives = 234/357 (65%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 27 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 86
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 87 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 146
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 147 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 206
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 207 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 266
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 267 FTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDL 326
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 327 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 381
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1004 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1062
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1063 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1093
>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
Length = 1137
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/357 (49%), Positives = 234/357 (65%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 27 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 86
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 87 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 146
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 147 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 206
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 207 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 266
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 267 FTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDL 326
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 327 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 381
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1003 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1061
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1062 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1092
>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
Length = 1161
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/357 (49%), Positives = 234/357 (65%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 50 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 109
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 110 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 169
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 170 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 229
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 230 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 289
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 290 FTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDL 349
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 350 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 404
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1027 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1085
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1086 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1116
>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205542 [Cucumis sativus]
Length = 1107
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/357 (49%), Positives = 241/357 (67%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI-LCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ ++ ++ ++ ++
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVTIYLYHYYFAFLKLCSL 89
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+L A+ ETDEVYAQ+TLLP PS + S +P+ F K LTASDTSTHGGF
Sbjct: 90 YLXADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGF 149
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 150 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 209
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 210 KRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 269
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 270 FTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGISDL 329
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 330 DPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
Length = 697
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 243/396 (61%), Gaps = 23/396 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E + + + ++P + CRVV+++
Sbjct: 30 ELWHACAGPVGPLPRKGSAVVYLPQGHLEHIGDAGSAAA-------KVPPHVFCRVVDVN 82
Query: 81 LMAEQETDEVYAQITL----------LPEPSQNEPTTPDPCPADSPR--PKV-HSFSKVL 127
L A+ TDEVYAQ+TL + + E D AD+ + P++ H F K L
Sbjct: 83 LQADAATDEVYAQVTLAVDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIPHMFCKTL 142
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 143 TASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 202
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRGE+GEL +GVR +A+ ++ P +Q L
Sbjct: 203 LTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPFPAPHNQDPGHSSLG 262
Query: 248 TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+HA+A ++ F VYY PR S+FII K++ +V F+ GMR+KMR+E ED+ ERR
Sbjct: 263 NVAHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSVGQPFSAGMRFKMRYENEDASERRS 322
Query: 306 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
+G ++G + P SKW+ L V+WD+ RP+RVSPW+IE + + + + +
Sbjct: 323 TGIIIGSRESDPKSYGSKWKCLVVRWDDDIEGRRPNRVSPWDIE-LTGAVSGSHLSIHHS 381
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
K +P L P + LPS + + A A+ H + Q
Sbjct: 382 KRMKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQ 417
>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
Length = 991
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/357 (49%), Positives = 234/357 (65%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 50 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 109
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 110 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 169
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 170 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 229
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 230 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 289
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 290 FTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDL 349
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 350 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 404
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 574 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTD 631
L R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D
Sbjct: 853 LKRMRTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKD 911
Query: 632 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
E D++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 912 HEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 946
>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
Length = 1096
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 240/360 (66%), Gaps = 10/360 (2%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P QG + YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 7 QELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 66
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+ ++A+ +TDEVYA++TL P + ++ T RP+ F K LTASDTSTHGG
Sbjct: 67 VTMLADPDTDEVYARMTLQPVSNCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGG 126
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 127 FSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 186
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 187 GKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 246
Query: 258 MFVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 247 QFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISD 306
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPRL
Sbjct: 307 LDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 363
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 978 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1036
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1037 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1066
>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
Length = 1113
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 237/360 (65%), Gaps = 10/360 (2%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P QG + YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 24 QELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 83
Query: 79 IHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+ ++A+ +TDEVYA++TL P E RP+ F K LTASDTSTHGG
Sbjct: 84 VTMLADPDTDEVYARMTLQPVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGG 143
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 144 FSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 203
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 204 GKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 263
Query: 258 MFVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 264 QFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISD 323
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPRL
Sbjct: 324 LDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 380
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 995 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1053
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1054 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1083
>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
Length = 330
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/372 (45%), Positives = 224/372 (60%), Gaps = 77/372 (20%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EAST +ELN+ P LPSK+ CRV+
Sbjct: 1 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 60
Query: 78 NIHLMAEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKVHSFSKV 126
IHL E +DE Y +ITL+P+ P++NE + RP V+SF+KV
Sbjct: 61 AIHLKVENNSDETYVEITLMPDTTVSKNLQVVIPTENE---------NQFRPIVNSFTKV 111
Query: 127 LTASDTSTHGGFSVLRKHATECLPPL-----DMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
LTASDTS G FSV KHA ECLPPL DM+Q P QEL+A DLHG +WRFKH +R
Sbjct: 112 LTASDTSAQGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYR- 170
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
GD VF R + +SM
Sbjct: 171 ----------------------GDVIVFAR------------------------YNIESM 184
Query: 242 HLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 301
GV+A+A HA Q MF++ YKPR+SQ+I+S K+L+AVNNKF VG +Y MRFE +D
Sbjct: 185 RHGVIASAKHAFDNQCMFIMVYKPRSSQYIVSHEKFLDAVNNKFNVGSKYTMRFEDDDLS 244
Query: 302 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT----- 356
E R+ GT++G+ DFSPHWK S+WRSL+VQWDE AS RP +VSPW+I+ ++S+
Sbjct: 245 ETRYFGTIIGISDFSPHWKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMSSSNVPREL 304
Query: 357 PNLVQPVLAKNK 368
N+V+ + +K
Sbjct: 305 CNMVKKIFIYSK 316
>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
Length = 1149
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/339 (50%), Positives = 229/339 (67%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + NI
Sbjct: 45 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICLLHNI 104
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 105 TLHADLETDEVYAQMTLQPVTSYGKEALQLSELALKQSRPQNEFFCKTLTASDTSTHGGF 164
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 165 SVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 224
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 225 KRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHADANNSP 284
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 285 FTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTITGISDL 344
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
P WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 345 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 383
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1015 RTFTKVYKRG-AVGRSIDISQYAGYDELKHALARMFSIEGQLEERQRIGWKLVYRDHEDD 1073
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1074 ILLLGDDPWEEFVNCVKYIRILSPQEVQQMS 1104
>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
Length = 1090
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 245/363 (67%), Gaps = 12/363 (3%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
+L ELW+ACAGPLV++P G V YFPQGH EQ+ AS +++ +IP + LP+K++C
Sbjct: 15 NLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYPNLPAKLICL 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL P PS E + +P+ F K LTASDTST
Sbjct: 75 LHNVTLHADPETDEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQPEFFCKTLTASDTST 134
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QELVA+DLH W F+H++RGQP+RHLLTTGWS
Sbjct: 135 HGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLLTTGWSL 194
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
V+ KRL AGD+ +F+R E + +G+R RQ +++ SSV+SS SMH+G+LA A+HA A
Sbjct: 195 VVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 254
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+ F V+Y PR S+F+I L KY +A +++ ++GMR++M FE E+S RR+ GT+ G
Sbjct: 255 NNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESGTRRYMGTITG 314
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNK 368
+ D P WK+S+WR+L+V WDE + R +RVS WEIEP A P L+ P + +K
Sbjct: 315 ISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITA---PFLICSSPFFS-SK 370
Query: 369 RPR 371
RPR
Sbjct: 371 RPR 373
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 978 RTYTKVYKRG-AVGRSIDIARYSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1036
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I S Q+V++MS
Sbjct: 1037 VLLVGDDPWEEFVSCVRCIKILSPQEVQQMS 1067
>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
Length = 1057
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 228/337 (67%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF
Sbjct: 82 TLHADVETDEVYAQMTLQPVSKYEKEALLASDMGLKQNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F+I +KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPRASPSEFVIPFSKYNKALYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
P WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 322 PVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL + W++VY D E D
Sbjct: 930 RTYTKVQKRG-SVGRSIDVTRYKGYNELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 988
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 989 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1019
>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
Length = 714
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 239/389 (61%), Gaps = 14/389 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L A+ +P + CRVV++
Sbjct: 39 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGPAAVAAVP-----PHVFCRVVDVS 93
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS------PRPKVHSFSKVLTASDTST 134
L A+ TDEVYAQ++L+ + + E + + P H F K LTASDTST
Sbjct: 94 LHADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARIPHMFCKTLTASDTST 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD + P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS
Sbjct: 154 HGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSG 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
F+ K+LV+GD +FLRGE+GEL +GVR A+ ++ P + +Q L+ +HAVA
Sbjct: 214 FINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQISSTSSLSEVAHAVA 273
Query: 255 TQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+++F +YY PR SQ FII K++ + + F+VGMR+K+R+E ED+ ERR +G ++G
Sbjct: 274 VKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGS 333
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
+ P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K +
Sbjct: 334 READPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSKRLKSCF 392
Query: 373 SMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
P + LP+ + + A A+ H + Q
Sbjct: 393 PQVNPDIVLPNGSVSSDFAESARFHKVLQ 421
>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
Length = 1116
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 238/363 (65%), Gaps = 13/363 (3%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P QG + YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 24 QELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 83
Query: 79 IHLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ ++A+ +TDEVYA++TL P + E RP+ F K LTASDTST
Sbjct: 84 VTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTST 143
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+ KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 263
Query: 255 TQTMFVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+ F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G
Sbjct: 264 NNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITG 323
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 369
+ D P WK S WR+++V WDE A R RVS WEIEP +A P + P L KR
Sbjct: 324 ISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKR 380
Query: 370 PRL 372
PRL
Sbjct: 381 PRL 383
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 998 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1056
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1057 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1086
>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
Length = 605
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 171/381 (44%), Positives = 230/381 (60%), Gaps = 23/381 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 52 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAA-------IYGLPPHVFCRILDVK 104
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 105 LHAETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPHMFCKTLTAS 164
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 165 DTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 224
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ A
Sbjct: 225 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNNFAEVV 284
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA++T + F +YY P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G
Sbjct: 285 HAISTNSAFNIYYNPKASWSNFIIPAPKFLKTVDYPFCIGMRFKARVESEDASERRSPGI 344
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEP-ASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
+ G+ D P W SKWR L V+WD+ A+ R+SPWEIEP + ++ +
Sbjct: 345 ITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEPSGSISSSGSF--ITTG 402
Query: 367 NKRPRLSMEVPPLDLPSAASA 387
KR R+ D+P + S
Sbjct: 403 PKRSRIGFSSGKPDIPVSGSG 423
>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
Length = 747
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 231/375 (61%), Gaps = 23/375 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH+E L + N LP + CRVV++
Sbjct: 55 ELWHACAGPLISLPKKGSAVVYLPQGHLEHLSEYPSIACN-------LPPHVFCRVVDVK 107
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----------HSFSKVLTAS 130
L A+ TDEVYAQ++L+P+ Q E D + H F K LTAS
Sbjct: 108 LQADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITPHMFCKTLTAS 167
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 168 DTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTT 227
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLR +GEL +GVR A+ ++ S+ +++ + A
Sbjct: 228 GWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSSYLAPCSKPLNVSGIVDAV 287
Query: 251 HAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+ ++++ F + Y PR +S FI+ +K+ + + + F+ GMR+KMR E ED+ E+RF+G
Sbjct: 288 NVISSRNAFNICYNPRDSSSDFIVPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGL 347
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
VVGV + P W SKWR L V+WD+ ++R +RVSPWEIEP ++ P+ + V+
Sbjct: 348 VVGVSNVDPVRWPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEPSGSAPVPSSL--VMPSA 404
Query: 368 KRPRLSMEVPPLDLP 382
KR R+ + D P
Sbjct: 405 KRTRVGFPISKADFP 419
>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
Length = 605
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/308 (51%), Positives = 217/308 (70%), Gaps = 11/308 (3%)
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFS 124
+I CRV+++ L A+QE D+VYAQ+TLLPE NE + + ++ H F
Sbjct: 1 QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFC 60
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPR
Sbjct: 61 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPR 120
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV K LV+GD +FLRGE+GEL +G+R +R SS+P SV+SSQ +HL
Sbjct: 121 RHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLS 180
Query: 245 VLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
+L+ A++A++T++MF V+Y PR S+F+I KY+++++ ++GMR+KMR E EDS E
Sbjct: 181 ILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAE 240
Query: 303 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
+R +G + G D P W +SKWR L V+WD+ + + R +RVSPWEIEP + + P L
Sbjct: 241 KRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSL--SLPALSC 298
Query: 362 PVLAKNKR 369
PV + KR
Sbjct: 299 PVAPRIKR 306
>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
Length = 1119
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/337 (51%), Positives = 226/337 (67%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVALPPVGSLVVYFPQGHSEQVAASMQKETD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGF
Sbjct: 82 TLHADAETDEVYAQMTLQPVNKYDKEALLASDMGLKQSRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F+I +KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPRASPSEFVIPFSKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
P WK S+WR+L+V WDE + RP RVS WE+EP V
Sbjct: 322 PVRWKTSQWRNLQVGWDESTAGERPSRVSIWEVEPVV 358
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VY D E D
Sbjct: 992 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 1050
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1051 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1081
>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 645
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/375 (44%), Positives = 225/375 (60%), Gaps = 20/375 (5%)
Query: 40 VYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE 99
V Y PQGH++ L + + CRVV++ L A+ TDEVYAQ++LLPE
Sbjct: 1 VVYLPQGHLDHLGDAPAPSPAAVP------PHVFCRVVDVTLHADASTDEVYAQLSLLPE 54
Query: 100 PSQ-----NEPTTPDPCPADSPRPKV------HSFSKVLTASDTSTHGGFSVLRKHATEC 148
+ E T D K H F K LTASDTSTHGGFSV R+ A +C
Sbjct: 55 NEEVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDC 114
Query: 149 LPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFV 208
PPLD +Q P QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+LV+GD +
Sbjct: 115 FPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVL 174
Query: 209 FLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS 268
FLRG++GEL +GVR + ++ + SQ +LG LA +HAVAT++MF ++Y PR S
Sbjct: 175 FLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRLS 234
Query: 269 Q--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRS 326
Q FI+ K+ ++ + F+VG R+KMR+E ED+ ERR++G + G D P W+ SKW+
Sbjct: 235 QSEFIVPYWKFTKSFSQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADPMWRGSKWKC 294
Query: 327 LKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAAS 386
L V+WD+ RP+RVSPWEIE +++ +L P +K +P L P +P
Sbjct: 295 LLVRWDDDGEFRRPNRVSPWEIELTSSASGSHLAAPT-SKRMKPYLPHANPEFTVPHGGG 353
Query: 387 APWSARLAQSHNLTQ 401
P A AQ + Q
Sbjct: 354 RPDFAESAQVRKVLQ 368
>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
Length = 954
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/375 (48%), Positives = 246/375 (65%), Gaps = 18/375 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSAF 277
Query: 258 MFV-VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
++ S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG+ D+
Sbjct: 278 GHSWNLHRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGISDYD 337
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR---- 369
P W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N +
Sbjct: 338 PMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKRQCL 391
Query: 370 PRLSMEVPPLDLPSA 384
P + VP +++ SA
Sbjct: 392 PGYGVSVPGMEIGSA 406
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 851 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/354 (49%), Positives = 234/354 (66%), Gaps = 11/354 (3%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ NSD LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 32 GEKKAPAINSD-----LWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPN 86
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + NI L A+ ETDEVYA++TL P S E RP+ F
Sbjct: 87 YPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEALQLSELALKQARPQNEFF 146
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP
Sbjct: 147 CKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQP 206
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+
Sbjct: 207 KRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHI 266
Query: 244 GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDS 300
G+LA A+HA A + F ++Y PR S +F+I KY +AV N+ ++GMR++M FE E+
Sbjct: 267 GILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEEL 326
Query: 301 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 327 GTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 380
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1131
>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1099
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/359 (50%), Positives = 243/359 (67%), Gaps = 10/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPL+++P G V YFPQGH EQ+ AS ++++ ++P + LPSKI C + N+
Sbjct: 28 ELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIPCLLHNV 87
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ +TDEVYAQ+TL P PS + S +P+ F K LTASDTSTHGGF
Sbjct: 88 TLHADPDTDEVYAQMTLQPVPSFDTDALLRSDIFLRSSKPQPEFFCKQLTASDTSTHGGF 147
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH WRF+HI+RGQP+RHLLTTGWS F+
Sbjct: 148 SVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWRFRHIYRGQPKRHLLTTGWSLFIGG 207
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ S++ SSV+SS SMH+GVLA A+ AVA +
Sbjct: 208 KRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAAAQAVANNSP 267
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +AV ++ + GMR++M FE EDS RR+ GT++GV D
Sbjct: 268 FTVFYNPRASPSEFVIPLAKYSKAVYSHHISPGMRFRMMFETEDSGTRRYMGTIIGVSDL 327
Query: 316 -SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLAKNKRPRL 372
S WK+S WR+L+V WDE + R RVS WEIEP TP + P ++K PRL
Sbjct: 328 DSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIEPV---TTPYFICPPPFFRSKIPRL 383
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R W++VY D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHEND 1045
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1076
>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/354 (49%), Positives = 234/354 (66%), Gaps = 11/354 (3%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ NSD LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 32 GEKKAPAINSD-----LWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPN 86
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + NI L A+ ETDEVYA++TL P S E RP+ F
Sbjct: 87 YPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEALQLSELALKQARPQNEFF 146
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP
Sbjct: 147 CKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQP 206
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+
Sbjct: 207 KRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHI 266
Query: 244 GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDS 300
G+LA A+HA A + F ++Y PR S +F+I KY +AV N+ ++GMR++M FE E+
Sbjct: 267 GILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEEL 326
Query: 301 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 327 GTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 380
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1131
>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
Length = 1120
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 230/347 (66%), Gaps = 9/347 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + R F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYDKDAILASDFGLKQNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS F+++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFIST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F +YY PR S+F++ L KY +A+ + ++GMR++M FE E+S RR+ GTV G+ D
Sbjct: 262 FTIYYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTVTGISDLD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
P WK+S+WR+L+V WDE + RP RVS W+IEP V TP + P
Sbjct: 322 PVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV---TPFYICP 365
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 993 RTYTKVQKRG-SVGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1051
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1052 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1082
>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
Length = 1055
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 233/347 (67%), Gaps = 9/347 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ IP + LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-NIPGYPSLPSKLICKLLSL 82
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGF
Sbjct: 83 TLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGF 142
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSP 262
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLD 322
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 323 PVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF VK I I S+ +V++MS
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
Length = 827
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/377 (44%), Positives = 237/377 (62%), Gaps = 22/377 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +P++G V YFPQGH+EQ + QE + R + LP +I+CRVV++
Sbjct: 39 ELWHACAGPLISLPQKGSVVVYFPQGHLEQHQV---QESHTRT--YDLPPQIICRVVDVK 93
Query: 81 LMAEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L AE DE+YAQ++LL E S N R H F K LTA
Sbjct: 94 LQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIPHMFCKTLTA 153
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDL+G+ WRF+HI+RGQPRRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQPRRHLLT 213
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISSQSMHLGVLAT 248
TGWS+F K+L GD +FLR ++GEL +G+R RQ Q +P + + Q + +L+
Sbjct: 214 TGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSRVNMLSM 273
Query: 249 ASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
+ A++ + +F +YY PR S +F++ KYL + ++ F++GMR K+R E ED+ E+R++
Sbjct: 274 VADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVEKRYT 333
Query: 307 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
G + GV D P W +SKWR L V+WD+ A DRVSPWEIE +S + P+ +
Sbjct: 334 GHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQ--SSLVSSFSFPLKS 391
Query: 366 KNKRPRLSMEVPPLDLP 382
+KRP+++ D+P
Sbjct: 392 TSKRPKMNFPSIITDIP 408
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 494 KTETGTSCRLFGIELINHATSS--APSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 551
+T + +CRLFG L S P ++ VS L +++ +D
Sbjct: 649 ETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGMTSHQTFPPTD-------- 700
Query: 552 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
K + +SP S Q S R TKV Q VGRA+DLT L GYD LI ELE
Sbjct: 701 ---PKISGIHLSPNSGGSLQP---STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELER 754
Query: 612 MFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
+ D++G L R W++VYTD+ DMMLVGD+PW EFC++V +I I + ++V
Sbjct: 755 LLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 806
>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
Length = 1143
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/374 (48%), Positives = 245/374 (65%), Gaps = 17/374 (4%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ N+D LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 30 GERKAPAINAD-----LWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPS 84
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + ++ L A+ +TDEVYAQ+TL P + E RP++ F
Sbjct: 85 YPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFF 144
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + LPPLD + P QEL A+D+H W F+HIFRGQP
Sbjct: 145 CKTLTASDTSTHGGFSVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQP 204
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+
Sbjct: 205 KRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHI 264
Query: 244 GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDS 300
GVLA A+HA A + F ++Y PR S +F+I KY +A+ +N+ ++GMR++M FE E+
Sbjct: 265 GVLAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEEL 324
Query: 301 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A P
Sbjct: 325 GMRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAA---PFF 381
Query: 360 V--QPVLAKNKRPR 371
+ QP KRPR
Sbjct: 382 ICPQPFFGV-KRPR 394
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1068
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1113
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 243/359 (67%), Gaps = 10/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPL+++P G V YFPQGH EQ+ AS ++++ ++P + LPSKI C + N+
Sbjct: 28 ELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIPCLLHNV 87
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ +TDEVYAQ+ L P PS + +P+ F K LTASDTSTHGGF
Sbjct: 88 TLHADPDTDEVYAQMALRPVPSFDTDALLRSDISLKLSKPQPEFFCKQLTASDTSTHGGF 147
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + +P QELVA+DLH WRF+HI+RG+P+RHLLTTGWS F++
Sbjct: 148 SVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPKRHLLTTGWSLFISG 207
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ S++ SSV+SS SMH+GVLA A+ AVA +
Sbjct: 208 KRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAAAQAVANNSP 267
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +AV ++ + GM ++M FE EDS RR+ GT++GV D
Sbjct: 268 FTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSGTRRYMGTIIGVSDL 327
Query: 316 -SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLAKNKRPRL 372
S WK+S WR+L+V WDE + R RVS WEIEP TP + P ++KRPRL
Sbjct: 328 DSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPV---TTPYFICPPPFFRSKRPRL 383
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHEND 1059
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
Length = 1125
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 228/337 (67%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E + F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYDKEALLASDMGLKQNQQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA + +
Sbjct: 202 KRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F+I L KY +A+ N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPRASPSEFVIPLAKYNKALFNQVSLGMRFRMMFETEESGVRRYMGTITGITDLD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
P WK+S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 322 PVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR +D+T GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 998 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1056
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1057 ILLVGDDPWEEFVSCVQSIKILSSSEVQQMS 1087
>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
Length = 1063
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 237/357 (66%), Gaps = 9/357 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLP 69
P + ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E++ IP + LP
Sbjct: 14 PEGEKKAINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVD-VIPNYPSLP 72
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLT 128
SK++C+++++ L A+ ETDEVYAQ+TL P + + + + F K LT
Sbjct: 73 SKLICKLLSLTLHADSETDEVYAQMTLQPVSKYDRDAMLASELGLKQNKQPMEFFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A + PPLD P QEL+AKDLH W+F+HIFRGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV++KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA
Sbjct: 193 TTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSDSMHIGILAA 252
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A+HA A + F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+
Sbjct: 253 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYM 312
Query: 307 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
GT+ G+ D P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 313 GTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 947 RTFTKVQKRG-SVGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 1005
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 1006 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1036
>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
Length = 961
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/356 (50%), Positives = 233/356 (65%), Gaps = 10/356 (2%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE--LNQRIPLF-RLPSKILCRVVN 78
LW CAGPLV +P G V YFPQGH EQ+ AST Q+ + IP + LP+ ++C + N
Sbjct: 16 LWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPNLPAHLICHLHN 75
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L A+ +TDEVYAQ+TL P + EP TPD P+ + SF K LTASDTSTHGG
Sbjct: 76 ITLHADPDTDEVYAQMTLQPVQNDKEPFLTPDL--GIQPKQQTLSFCKTLTASDTSTHGG 133
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS+ R+ A + PPLD + P QELVAKDLH +W F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 134 FSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVS 193
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGDT +F+R EN L +G+R RQQ+++PSS++SS SM +GVLA A+HA T +
Sbjct: 194 AKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNS 253
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
F ++Y PR S+F++ ++ +A + + VGMR++M E EDS RR+ GT+ G+ D
Sbjct: 254 RFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRYMGTITGIGD 313
Query: 315 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
S W +S WR+LKV WDE + R RVS WEIEP A P L K R
Sbjct: 314 LDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLTAPYFPCTSSLFLRKRTR 369
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTDDEG 634
R+ TKV + +VGR++D+T L Y+ L ++ MF+++GQL R+ W++V+ D EG
Sbjct: 825 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 884
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
D++LVGDDPW EF V+ I I S +V++++
Sbjct: 885 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQLN 916
>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
Length = 702
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 238/397 (59%), Gaps = 23/397 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E + + +P +LCRVV++
Sbjct: 36 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHIGGDADAAGAA------VPPHVLCRVVDVT 89
Query: 81 LMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKV---HSFSKV 126
L A+ TDEVYA+++LLPE + E D + +P H F K
Sbjct: 90 LHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLARTPHMFCKT 149
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRH
Sbjct: 150 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRH 209
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWS FV K+LV+GD +FLRGE+G L +GVR A+ + P + +Q L
Sbjct: 210 LLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPALHNQCSSQTTL 269
Query: 247 ATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
+ AVAT+T+F +YY PR SQ FI+ K+ ++N +VGMR +MR+E +D+ ERR
Sbjct: 270 GNVAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRSLNQPISVGMRCRMRYESDDASERR 329
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + ++ P
Sbjct: 330 CTGIIIGSREAEPIWYGSKWKCLVVRWDDGIECHWPNRVSPWEIEVTGSVSGSHMCAPN- 388
Query: 365 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
+K +P L P + LP+ + + A + H + Q
Sbjct: 389 SKRLKPCLPQVNPEIVLPNGSVSSDFAGSVRFHKVLQ 425
>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
Length = 958
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/356 (50%), Positives = 233/356 (65%), Gaps = 10/356 (2%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE--LNQRIPLF-RLPSKILCRVVN 78
LW CAGPLV +P G V YFPQGH EQ+ AST Q+ + IP + LP+ ++C + N
Sbjct: 16 LWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPSLPAHLICHLHN 75
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L A+ +TDEVYAQ+TL P + EP TPD P+ + SF K LTASDTSTHGG
Sbjct: 76 ITLHADPDTDEVYAQMTLQPVQNDKEPFLTPDL--GIQPKQQTLSFCKTLTASDTSTHGG 133
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS+ R+ A + PPLD + P QELVAKDLH +W F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 134 FSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVS 193
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGDT +F+R EN L +G+R RQQ+++PSS++SS SM +GVLA A+HA T +
Sbjct: 194 AKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNS 253
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
F ++Y PR S+F++ ++ +A + + VGMR++M E EDS RR+ GT+ G+ D
Sbjct: 254 RFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRYMGTITGIGD 313
Query: 315 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
S W +S WR+LKV WDE + R RVS WEIEP A P L K R
Sbjct: 314 LDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLTAPYFPCTSSLFLRKRTR 369
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTDDEG 634
R+ TKV + +VGR++D+T L Y+ L ++ MF+++GQL R+ W++V+ D EG
Sbjct: 822 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 881
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
D++LVGDDPW EF V+ I I S +V++++
Sbjct: 882 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQLN 913
>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
Length = 1055
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/347 (49%), Positives = 232/347 (66%), Gaps = 9/347 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ IP + LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-NIPGYPSLPSKLICKLLSL 82
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVY Q+TL P + + F K LTASDTSTHGGF
Sbjct: 83 TLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGF 142
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSP 262
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLD 322
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 323 PVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF VK I I S+ +V++MS
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
Length = 1136
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 226/337 (67%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYEKEAILASDIGLKQNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + LPPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F++ L KY +A+ + ++GMR++M FE E+S R + GT+ G+ D
Sbjct: 262 FTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRGYMGTITGISDLD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
P WK S+WR+++V WDE + RP RVS WEIEP V
Sbjct: 322 PVRWKSSQWRNIQVGWDESTAGERPRRVSIWEIEPVV 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1008 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1066
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1067 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1097
>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1110
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 246/357 (68%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS N++ + +IP + LPSK+LC + N+
Sbjct: 25 ELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYPNLPSKLLCLLHNL 84
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L+A+ ETDEVYAQITL P PS + S +P+ F K LTASDTSTHGGF
Sbjct: 85 TLLADPETDEVYAQITLQPVPSFDKDALLRSDLALKSSKPQPDFFCKQLTASDTSTHGGF 144
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 145 SVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSG 204
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 205 KRLLAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 264
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PRT S+F+I L KY ++V +++ ++GMR++M FE EDS RR+ GT+ G+ D
Sbjct: 265 FTVFYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRYMGTITGISDL 324
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE + + RVS WEIEP A + P ++KRPR
Sbjct: 325 DPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFF--ICPPPFFRSKRPR 379
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 998 RTYTKVYKRG-AVGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1056
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1057 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1087
>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
Length = 1096
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/346 (50%), Positives = 238/346 (68%), Gaps = 6/346 (1%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKI 72
N + ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++ + ++P + LPSK+
Sbjct: 24 NDGGVNSELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDGDVQVPNYSNLPSKL 83
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASD 131
C + ++ L A+ +TDEVYA++TL P S + + S +P+ F K LTASD
Sbjct: 84 PCTLHSLTLHADSDTDEVYARMTLQPVSSFDMDAILRSDISLKSNKPQPEFFCKQLTASD 143
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD + P QELVAKDLHG W+F+HI+RGQP+RHLLTTG
Sbjct: 144 TSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTG 203
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS F++ KRL+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+H
Sbjct: 204 WSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAH 263
Query: 252 AVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 308
A A + F V+Y PR S+F+I L KY AV +++ + GMR++M FE EDS RR+ GT
Sbjct: 264 ASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSGTRRYMGT 323
Query: 309 VVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
V+GV D S WK+S+WR+L+V WDE + R RVS WEIEP A
Sbjct: 324 VIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVTA 369
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 984 RTYTKVYKRG-AVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHEND 1042
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1043 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 171/336 (50%), Positives = 225/336 (66%), Gaps = 23/336 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS++LC+V N+
Sbjct: 20 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPNYPNLPSQLLCQVHNV 79
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE+YAQ++L P ++ + P P RP H F K LTASDTSTHG
Sbjct: 80 TLHADKDTDEIYAQMSLQPVNTEKDVF---PIPDFGLRPSKHPSEFFCKTLTASDTSTHG 136
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 137 GFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 196
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 197 GSKRLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHATANR 256
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+ F ++Y PR S F+I L K+ +AV + +VGMR+ M FE E+S +RR+ GT+VG+
Sbjct: 257 SPFTIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGIS 316
Query: 314 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
D V+WDEP + +RVS WEIE
Sbjct: 317 DL-------------VEWDEPGCSDKQNRVSSWEIE 339
>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
Length = 1131
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/337 (51%), Positives = 224/337 (66%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F++ L KY + + ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPRASPSEFVVPLAKYNKVTYTQVSLGMRFRMMFETEESGVRRYMGTITGINDLD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
P WK S+WR+++V WDE + RP RVS WEIEP V
Sbjct: 322 PVRWKSSQWRNIQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1003 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1061
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1062 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1092
>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
Length = 1147
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 187/409 (45%), Positives = 258/409 (63%), Gaps = 23/409 (5%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ N+D LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 34 GERKAPAINAD-----LWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPS 88
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + ++ L A+ +TDEVYAQ+TL P + E RP++ F
Sbjct: 89 YPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFF 148
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + LPPLD P QEL A+D+H W F+HIFRGQP
Sbjct: 149 CKTLTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQP 208
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+
Sbjct: 209 KRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHI 268
Query: 244 GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDS 300
GVLA A+HA A + F ++Y PR S +F+I K+ +A+ +N+ ++GMR++M FE E+
Sbjct: 269 GVLAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEEL 328
Query: 301 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A P
Sbjct: 329 GMRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAA---PFF 385
Query: 360 V--QPVLAKNKRPR-LSMEVPPLDLPSAASAPW-----SARLAQSHNLT 400
+ QP KRPR + E ++ + PW + AQ+HN T
Sbjct: 386 ICPQPFFGV-KRPRQIDDESSEMENLFKRAMPWLGEEICIKDAQTHNTT 433
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GY+ L + MF I+GQL R + W++VYTD E D
Sbjct: 1014 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1072
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1073 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1103
>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
Length = 1123
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 173/337 (51%), Positives = 225/337 (66%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 9 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETD-GIPSYPNLPSKLICMLHNV 67
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGF
Sbjct: 68 TLHADTETDEVYAQMTLQPVNKYDQEALLLSEMGLKQNRQPAEFFCKTLTASDTSTHGGF 127
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+A+DLH W F+HI+RGQP+RHLLTTGWS F++S
Sbjct: 128 SVPRRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLTTGWSVFISS 187
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 188 KRLCAGDSVLFIRDEKSQLLLGIKRTNRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 247
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ GV D
Sbjct: 248 FTIFYNPRASPSEFVIPLAKYNKAMYAQVSLGMRFRMMFETEESGVRRYMGTITGVSDLD 307
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
P WK S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 308 PIRWKSSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 344
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR +D+T +GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 997 RTYTKVQKRG-SVGRTIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1055
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
++LVGDDPW EF + V+ I I S +V++MS L
Sbjct: 1056 ILLVGDDPWEEFVSCVQSIKILSCAEVQQMSLNGDL 1091
>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
Length = 1053
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 230/346 (66%), Gaps = 7/346 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDTVPSYPSLPSKLICKLLSLT 83
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+ L P + + F K LTASDTSTHGGFS
Sbjct: 84 LHADSETDEVYAQMMLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTASDTSTHGGFS 143
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 144 VPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTK 203
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RL+AGD+ +F+R E +L +G+R +R Q ++ SSV+SS SMH+G+LA A+HA A + F
Sbjct: 204 RLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPF 263
Query: 260 VVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D P
Sbjct: 264 TIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDP 323
Query: 318 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 324 LRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL RT W++VY D E D
Sbjct: 939 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 997
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 998 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1028
>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
gi|224033653|gb|ACN35902.1| unknown [Zea mays]
gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
Length = 708
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 235/398 (59%), Gaps = 22/398 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E + + +P +LCRVV++
Sbjct: 34 ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASA----VPPHVLCRVVDVT 89
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------------DPCPADSPRPKV---HSFSK 125
L A+ TDEVYA+++LLPE E D + RP H F K
Sbjct: 90 LHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHMFCK 149
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRR
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRR 209
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV K+L++GD +FLRGE+G L +GVR A+ + P +Q
Sbjct: 210 HLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSSNSN 269
Query: 246 LATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
L + AVAT+T+F +YY PR +Q FI+ K+ + N +VGMR +MR+E +D+ ER
Sbjct: 270 LGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDASER 329
Query: 304 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
R +G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + + P
Sbjct: 330 RCTGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCAPS 389
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
+K +P L P + LP+ + + A A+ H + Q
Sbjct: 390 -SKRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
Length = 698
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 235/398 (59%), Gaps = 22/398 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E + + +P +LCRVV++
Sbjct: 34 ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASA----VPPHVLCRVVDVT 89
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------------DPCPADSPRPKV---HSFSK 125
L A+ TDEVYA+++LLPE E D + RP H F K
Sbjct: 90 LHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHMFCK 149
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRR
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRR 209
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV K+L++GD +FLRGE+G L +GVR A+ + P +Q
Sbjct: 210 HLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSSNSN 269
Query: 246 LATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
L + AVAT+T+F +YY PR +Q FI+ K+ + N +VGMR +MR+E +D+ ER
Sbjct: 270 LGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDASER 329
Query: 304 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
R +G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + + P
Sbjct: 330 RCTGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCAPS 389
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 401
+K +P L P + LP+ + + A A+ H + Q
Sbjct: 390 -SKRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
Length = 470
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/335 (50%), Positives = 226/335 (67%), Gaps = 15/335 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 48 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 107
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + + F K LTASDTSTHGGF
Sbjct: 108 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLNRSKHPAEFFCKTLTASDTSTHGGF 167
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 168 SVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 227
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 228 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 287
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F+++Y PR ++F+I L KY +A+ + + GMR+ M FE EDS +R D
Sbjct: 288 FLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKR---------SDM 338
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 339 DPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 373
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 671
W++VY D E D++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 408 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMSEEGMKL 455
>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/357 (49%), Positives = 236/357 (66%), Gaps = 9/357 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLP 69
P + ELW AC+GPLV +P G V YFPQGH EQ+ AS ++E++ IP + LP
Sbjct: 14 PEGEKKAINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVD-IIPNYPSLP 72
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLT 128
SK++C+++++ L A+ ETDEVYAQ+TL P + + V F K LT
Sbjct: 73 SKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPVEFFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A + PPLD P QEL+AKDLH W+F+HIFRGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV++KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA
Sbjct: 193 TTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAA 252
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A+HA A + F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+
Sbjct: 253 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYM 312
Query: 307 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
GT+ G+ D P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 313 GTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
Length = 1088
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/462 (42%), Positives = 268/462 (58%), Gaps = 24/462 (5%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + LPSK++C + N
Sbjct: 23 QELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHN 82
Query: 79 IHLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ + A+ +TDEVYA++TL P + E RP+ F K LTASDTST
Sbjct: 83 VTMEADPDTDEVYARMTLQPVSNVTQCDKEILLASEIALKQSRPQTEFFCKTLTASDTST 142
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A P LD + P QEL A+DLH W F+HIFRGQP+RHLLTTGWS
Sbjct: 143 HGGFSVPRRAAERIFPQLDFSLQPPAQELQARDLHDNTWTFRHIFRGQPKRHLLTTGWSL 202
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
F++ KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A
Sbjct: 203 FISGKRLLAGDSVLFIRDGKHQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAAA 262
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+ F ++Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G
Sbjct: 263 NNSQFTIFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESGTRRYMGTITG 322
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 369
+ D P WK S+WRS++V WDE A R RVS WEIEP +A P + P L KR
Sbjct: 323 ISDLDPVRWKSSQWRSIQVAWDEAAPTERRTRVSLWEIEPVIA---PFFIYPSPLFTAKR 379
Query: 370 PR----LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 425
R + E +D + PW +L + A + + W + + S
Sbjct: 380 ARQPGMIDDETSEMDNLFKRTMPWLGEDICKKDLNSQNSIAPGLNLVQSLQWMNMQQNLS 439
Query: 426 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWP 467
++ T E L S K Q L A D ++ IS P
Sbjct: 440 -----LAGTGMQPELLNSLASKHVQNL--SAADISRQISFQP 474
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL +R W++VY D E D
Sbjct: 975 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1033
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++LVGDDPW +F N V+ I I S Q+ +M
Sbjct: 1034 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1063
>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
Length = 1122
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/337 (50%), Positives = 226/337 (67%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E + F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA + +
Sbjct: 202 KRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F ++Y PR S+F+I KY +A+ N ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPRASPSEFVIPSAKYNKALYNHASLGMRFRMMFETEESGVRRYMGTITGITDVD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
P WK+S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 322 PVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ G +VGR +D+T GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 995 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1053
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V+KMS
Sbjct: 1054 ILLVGDDPWEEFVSCVQSIKILSSAEVQKMS 1084
>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
Length = 1149
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/411 (45%), Positives = 258/411 (62%), Gaps = 25/411 (6%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ N+D LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 34 GERKAPAINAD-----LWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPS 88
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + ++ L A+ +TDEVYAQ+TL P + E RP++ F
Sbjct: 89 YPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFF 148
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + LPPLD P QEL A+D+H W F+HIFRGQP
Sbjct: 149 CKTLTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQP 208
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+
Sbjct: 209 KRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHI 268
Query: 244 GVLATASHAVATQTMFVVYYKPRT----SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGE 298
GVLA A+HA A + F ++Y PR ++F+I K+ +A+ +N+ ++GMR++M FE E
Sbjct: 269 GVLAAAAHAAANNSPFTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETE 328
Query: 299 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A P
Sbjct: 329 ELGMRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAA---P 385
Query: 358 NLV--QPVLAKNKRPR-LSMEVPPLDLPSAASAPW-----SARLAQSHNLT 400
+ QP KRPR + E ++ + PW + AQ+HN T
Sbjct: 386 FFICPQPFFGV-KRPRQIDDESSEMENLFKRAMPWLGEEICIKDAQTHNTT 435
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GY+ L + MF I+GQL R + W++VYTD E D
Sbjct: 1016 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1074
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1075 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1105
>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
Length = 1095
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/362 (47%), Positives = 237/362 (65%), Gaps = 13/362 (3%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 26 QELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICILRS 85
Query: 79 IHLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ ++A+ +TDEVYA++TL P + E RP+ F K LTASDTST
Sbjct: 86 VTMLADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQTRPQTEFFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSL 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+ KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAA 265
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+ F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G
Sbjct: 266 NNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITG 325
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 369
+ D P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L KR
Sbjct: 326 ISDMDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIA---PFFIYPSPLFTAKR 382
Query: 370 PR 371
PR
Sbjct: 383 PR 384
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 977 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKD 1035
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++LVGDDPW +F N V+ I I S Q+ ++M
Sbjct: 1036 VLLVGDDPWEDFVNCVRCIRILSPQEERQM 1065
>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
Length = 1142
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 174/357 (48%), Positives = 238/357 (66%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + +
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHGV 103
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+L A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGF
Sbjct: 104 NLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGF 163
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 164 SVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 223
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A +
Sbjct: 224 KRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSP 283
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 284 FTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGISDL 343
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 344 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 398
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 444 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 502
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 886 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 937
Query: 503 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 558
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 938 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 989
Query: 559 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 618
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 990 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1048
Query: 619 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1049 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1098
>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
Length = 1139
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 174/357 (48%), Positives = 238/357 (66%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + +
Sbjct: 41 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHGV 100
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+L A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGF
Sbjct: 101 NLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGF 160
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 161 SVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 220
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A +
Sbjct: 221 KRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSP 280
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 281 FTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGISDL 340
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 341 DPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 395
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 444 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 502
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 883 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 934
Query: 503 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 558
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 935 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 986
Query: 559 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 618
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 987 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1045
Query: 619 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1095
>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
Full=Auxin-responsive protein IAA22
gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
Length = 1086
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/391 (47%), Positives = 246/391 (62%), Gaps = 16/391 (4%)
Query: 11 PSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF- 66
PSSN + + +LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP +
Sbjct: 10 PSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYP 68
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 125
LPSK++C + ++ L A+ ETDEVYAQ+TL P E R F K
Sbjct: 69 NLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCK 128
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKR 188
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV++KRL AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGI 248
Query: 246 LATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
LA A+HA A + F +++ PR S+F++ L KY +A+ + ++GMR++M FE ED R
Sbjct: 249 LAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVR 308
Query: 304 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQ 361
R+ GTV G+ D P WK S+WR+L+V WDE + RP RVS WEIEP + TP +
Sbjct: 309 RYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYICP 365
Query: 362 PVLAKNKRPRL-SMEVPPLDLPSA--ASAPW 389
P + K PR M LD+ +A + PW
Sbjct: 366 PPFFRPKYPRQPGMPDDELDMENAFKRAMPW 396
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1047
>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 1104
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/357 (50%), Positives = 242/357 (67%), Gaps = 8/357 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS N++++ +IP + LPSK+LC + +
Sbjct: 10 ELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKLLCLLHTL 69
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ +TD+VYAQITL P PS + +S +P F K LTASDTSTHGGF
Sbjct: 70 TLHADPQTDQVYAQITLQPLPSFDKDALLRSDLALESTKPPPDFFCKQLTASDTSTHGGF 129
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W+F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 130 SVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLLTTGWSLFVSG 189
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 190 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 249
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY ++V +++ ++GMR++M FE EDS RR GTV G+ D
Sbjct: 250 FTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRHMGTVTGISDL 309
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE + + RVS WEIEP A + P ++KRPR
Sbjct: 310 DPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 364
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 992 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1050
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1051 VLLLGDDPWEEFVNCVRCIKILSPQEVQQMS 1081
>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
Length = 1049
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 182/378 (48%), Positives = 240/378 (63%), Gaps = 13/378 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
+LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C + ++
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYPNLPSKLICLLHSV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGF
Sbjct: 82 TLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKINRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F +++ PR S+F++ L KY +A+ + ++GMR++M FE ED RR+ GTV G+ D
Sbjct: 262 FTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL-S 373
P WK S+WR+L+V WDE + RP RVS WEIEP + TP + P + K PR
Sbjct: 322 PVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYICPPPFFRPKYPRQPG 378
Query: 374 MEVPPLDLPSA--ASAPW 389
M LD+ +A + PW
Sbjct: 379 MPDDELDMENAFKRAMPW 396
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GY+ L ++L MF I+GQL + W++VYTD E D
Sbjct: 921 RTYTKVQKRG-SVGRSIDVTRYSGYEELRNDLARMFGIEGQLEDPQISDWKLVYTDHEND 979
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 980 ILLVGDDPWEEFVNCVQNIKILSSAEVQQMS 1010
>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
Length = 1020
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/378 (48%), Positives = 240/378 (63%), Gaps = 13/378 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
+LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C + ++
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYPNLPSKLICLLHSV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGF
Sbjct: 82 TLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L + +R RQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLIAGDSVLFVRDEKSQLTLVIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANNSP 261
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
F +++ PR S+F++ L KY +A+ + ++GMR++M FE ED RR+ GTV GV D
Sbjct: 262 FTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGVSDLD 321
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL-S 373
P WK S+WR+L+V WDE + RP RVS WEIEP + TP + P + K PR
Sbjct: 322 PVRWKGSQWRNLQVGWDESTAGDRPSRVSVWEIEPVI---TPFYICPPPFFRPKYPRQPG 378
Query: 374 MEVPPLDLPSA--ASAPW 389
M LD+ +A + PW
Sbjct: 379 MPDDELDMENAFKRAMPW 396
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L ++L MF I+GQL + W++VYTD E D
Sbjct: 892 RTYTKVQKRG-SVGRSIDVTRYSGYDELRNDLARMFGIEGQLEDPRPSDWKLVYTDHEND 950
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 951 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 981
>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
leschenaultii]
Length = 550
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/365 (44%), Positives = 226/365 (61%), Gaps = 32/365 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+V +PK+G V YFPQGH+EQ+ + LP + RVV++
Sbjct: 24 ELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHF-----VGLSADALPPHVFSRVVHVT 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPT-------------TPDPCPADSPRPKVHSFSKVL 127
LMA+ TDEVYAQ++L+P + + + P H F K L
Sbjct: 79 LMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLGPTKIPHMFCKTL 138
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q PTQELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 139 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFRHIYRGQPRRHL 198
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS+FV K+LV+GD +FLRG++GEL +G+R + +S+ ++ +S ++
Sbjct: 199 LTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPAIQNSN------IS 252
Query: 248 TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+ A++ +++F + Y PR S+FI+ K++++ N+ ++G R+KM FE ED+ ERR+
Sbjct: 253 NIAQAISKKSLFHICYNPRDGQSEFIVPYWKFMKSFNHPISIGTRFKMNFESEDASERRY 312
Query: 306 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+G + G+ D P W SKWR L V+WDE R +RVSPWEIE T + Q ++
Sbjct: 313 NGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIE-----LTGTVSQGMM 367
Query: 365 AKNKR 369
A N +
Sbjct: 368 APNSK 372
>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 238/366 (65%), Gaps = 19/366 (5%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GT
Sbjct: 255 HANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGT 314
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
V G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 315 VTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPF 369
Query: 368 KRPRLS 373
RPR S
Sbjct: 370 FRPRFS 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
Full=Auxin-responsive protein IAA21/IAA23/IAA25;
AltName: Full=Protein BIPOSTO; AltName: Full=Protein
NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
TRANSPORT INHIBITOR RESPONSE 5
gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 238/366 (65%), Gaps = 19/366 (5%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GT
Sbjct: 255 HANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGT 314
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
V G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 315 VTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPF 369
Query: 368 KRPRLS 373
RPR S
Sbjct: 370 FRPRFS 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
Length = 1168
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/374 (47%), Positives = 241/374 (64%), Gaps = 20/374 (5%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPR---TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ G
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMG 314
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
TV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 315 TVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PP 369
Query: 367 NKRPRLSMEVPPLD 380
RPR S + LD
Sbjct: 370 FFRPRFSGQPGMLD 383
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1041 RTYTKVQERG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHETD 1099
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ + I SS +V++MS
Sbjct: 1100 ILLVGDDPWEEFVNFVQSLKILSSAEVQQMS 1130
>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1083
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 235/362 (64%), Gaps = 13/362 (3%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 22 QELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 81
Query: 79 IHLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ + ++ ETDEVYA++TL P + E +P+ F K LTASDTST
Sbjct: 82 VTMQSDPETDEVYARMTLQPVSNVTQCDKEILLASELALKQNKPQTEFFCKTLTASDTST 141
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A P LD + P QEL A+DLH W F+HIFRGQP+RHLLTTGWS
Sbjct: 142 HGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLLTTGWSL 201
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
F++ KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A
Sbjct: 202 FISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAAA 261
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+ F ++Y PR S+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G
Sbjct: 262 NNSQFTIFYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITG 321
Query: 312 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 369
+ D P WK+S+WR+++V WDE A R RVS W+IEP +A P + P L KR
Sbjct: 322 ISDLDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIA---PFFIYPTPLFTAKR 378
Query: 370 PR 371
R
Sbjct: 379 AR 380
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL +R W++VY D E D
Sbjct: 970 RTYTKVHKRG-AVGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1028
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++LVGDDPW +F N V+ I I S Q+ +M
Sbjct: 1029 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1058
>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
Length = 1141
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/339 (49%), Positives = 227/339 (66%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ ++P + LPSK++C + ++
Sbjct: 33 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAQVPNYPNLPSKLICLLHSV 92
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ +TDEVYAQ+TL P E RP++ F K LTASDTSTHGGF
Sbjct: 93 ILQADPDTDEVYAQMTLQPVNTYAKEALQLSELALRQARPQMEFFCKTLTASDTSTHGGF 152
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + P LD + P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV+
Sbjct: 153 SVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFRGQPKRHLLTTGWSLFVSG 212
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
K+L AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A +
Sbjct: 213 KKLFAGDSVIFVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSP 272
Query: 259 FVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F ++Y PR S +F+I KY +A+ +N+ ++GMR++M E E+ RR+ GT+ G+ D
Sbjct: 273 FTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCETEELGTRRYMGTITGISDL 332
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
P WK S+WRSL+V WDE A+ R +RVS WEIEP A
Sbjct: 333 DPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEIEPLAA 371
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GY L L MF I+GQL R + W++VYTD E D
Sbjct: 1008 RTFTKVYKRG-AVGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDD 1066
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1067 VLLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1097
>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
Length = 1085
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 235/361 (65%), Gaps = 13/361 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + L SK++C + ++
Sbjct: 24 ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83
Query: 80 HLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
++A+ +TDEVYA++TL P + E RP+ F K LTASDTSTH
Sbjct: 84 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDTSTH 143
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 144 GGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLF 203
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A
Sbjct: 204 VSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAAN 263
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 264 NSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITGI 323
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 370
D P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L KRP
Sbjct: 324 SDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIA---PFFIYPSPLFTAKRP 380
Query: 371 R 371
R
Sbjct: 381 R 381
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 544 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 603
G +DIA + +Q + S++ R+ TKV +G AVGR++D+ GYD
Sbjct: 933 GVADIAFNSIDSSINDIQFLNRNSRAPGPVQQRMRTYTKVHKRG-AVGRSIDINRYSGYD 991
Query: 604 HLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
L ++ MF I+GQL R W++VY D E D++LVGDDPW +F N V+ I I S Q+
Sbjct: 992 ELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQE 1051
Query: 662 VKKM 665
++M
Sbjct: 1052 ERQM 1055
>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
Length = 1086
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 235/361 (65%), Gaps = 13/361 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + L SK++C + ++
Sbjct: 24 ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83
Query: 80 HLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
++A+ +TDEVYA++TL P + E RP+ F K LTASDTSTH
Sbjct: 84 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDTSTH 143
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 144 GGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLF 203
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A
Sbjct: 204 VSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAAN 263
Query: 256 QTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 264 NSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITGI 323
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 370
D P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L KRP
Sbjct: 324 SDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIA---PFFIYPSPLFTAKRP 380
Query: 371 R 371
R
Sbjct: 381 R 381
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 544 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 603
G +DIA + +Q + S++ R+ TKV +G AVGR++D+ GYD
Sbjct: 934 GVADIAFNSIDSSINDIQFLNRNSRAPGPVQQRMRTYTKVHKRG-AVGRSIDINRYSGYD 992
Query: 604 HLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
L ++ MF I+GQL R W++VY D E D++LVGDDPW +F N V+ I I S Q+
Sbjct: 993 ELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQE 1052
Query: 662 VKKM 665
++M
Sbjct: 1053 ERQM 1056
>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1165
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/367 (48%), Positives = 238/367 (64%), Gaps = 20/367 (5%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPR---TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ G
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMG 314
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
TV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 315 TVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PP 369
Query: 367 NKRPRLS 373
RPR S
Sbjct: 370 FFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1150
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 177/367 (48%), Positives = 238/367 (64%), Gaps = 20/367 (5%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPR---TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ G
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMG 314
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
TV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 315 TVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PP 369
Query: 367 NKRPRLS 373
RPR S
Sbjct: 370 FFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
Length = 1047
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 221/336 (65%), Gaps = 4/336 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + L SK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFVPSYPNLTSKLICMLHNVT 82
Query: 81 LMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF
Sbjct: 83 LHADVETDEVYAQMTLQPVSKYDKEALLASDLGQKQSRQPTEFFCKTLTASDTSTHGGFF 142
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 143 VPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTK 202
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
R+ GD+ +F+R E +L +G+R RQQ ++ SS+ISS SMH+G+LA A+HA A + F
Sbjct: 203 RIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLISSDSMHIGILAAAAHAAANNSPF 262
Query: 260 VVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
++Y P S+F+I +KY +A+ + ++GMR++M F E+S RR+ GT+ G+ D P
Sbjct: 263 TIFYNPSASPSEFVIPFSKYNKAMYTQGSLGMRFRMMFTTEESGVRRYMGTITGISDLDP 322
Query: 318 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
WK+S+WR+L+V WDE + RP+RVS WEIEP V
Sbjct: 323 VRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPVV 358
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 533 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN---RSRTKVQMQGVA 589
+ST + +A S G S+I FK + ++ + + N R+ TKVQ +G +
Sbjct: 885 LSTAAISAQSFGVSNIP--FKPDGSNDIAINDTGILNNGAWTNQNQRMRTYTKVQKRG-S 941
Query: 590 VGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEF 647
VGR++D+T GYD L +L MF I+GQL + W++VY D E D++LVGDDPW EF
Sbjct: 942 VGRSIDITCYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDRENDILLVGDDPWEEF 1001
Query: 648 CNMVKRIFICSSQDVKKMS 666
+ V+ I I SS +V++MS
Sbjct: 1002 MSCVQSIKILSSAEVQQMS 1020
>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
Length = 1100
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 233/355 (65%), Gaps = 17/355 (4%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LQNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSNKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GT
Sbjct: 255 HANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGT 314
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
V G+ D P WK S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 315 VTGISDLDPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP 366
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 973 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1031
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1032 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1062
>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
Length = 1165
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 238/364 (65%), Gaps = 14/364 (3%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ N+ L A+ ETDEVYAQ+TL P + +N D + +P F K LTASDTS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDRNALLASDMGLKLNRQPN-EFFCKTLTASDTS 137
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 THGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWS 197
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KR AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA
Sbjct: 198 VFVSTKRFFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHAN 257
Query: 254 ATQTMFVVYYKPR---TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV
Sbjct: 258 ANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVT 317
Query: 311 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
G+ D P W++S+WR+L++ WDE A+ RP RVS W+IEP + TP + P R
Sbjct: 318 GISDLDPVRWENSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPFFR 372
Query: 370 PRLS 373
PR S
Sbjct: 373 PRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
Length = 479
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/314 (47%), Positives = 197/314 (62%), Gaps = 53/314 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 18 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 77
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ +
Sbjct: 78 AIDRKVDKNTDEVYAQISLMPDTT------------------------------------ 101
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 195
DM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 102 ---------------DMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 146
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 147 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 206
Query: 256 QTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+ MF V YKP +SQF+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++GV D
Sbjct: 207 KCMFNVVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDM 266
Query: 316 SPHWKDSKWRSLKV 329
SPHWKDS+WRSLK+
Sbjct: 267 SPHWKDSEWRSLKI 280
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 79/105 (75%)
Query: 567 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 626
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 355 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 414
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 415 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 459
>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
Length = 1096
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 186/405 (45%), Positives = 246/405 (60%), Gaps = 30/405 (7%)
Query: 11 PSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF- 66
P+SN + + +LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP +
Sbjct: 10 PTSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYP 68
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 125
LPSK++C + ++ L A+ ETDEVYAQ+TL P E R F K
Sbjct: 69 NLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCK 128
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKR 188
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFL--------------RGENGELHVGVRCLARQQSSM 231
HLLTTGWS FV++KRL AGD+ +F+ R E +L +G+R RQ ++
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFVRIGLSSSHKGTWVCRDEKSQLMLGIRRANRQTPTL 248
Query: 232 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGM 289
SSVISS SMH+G+LA A+HA A + F +++ PR S+FI+ L KY +A+ + ++GM
Sbjct: 249 SSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFIVPLAKYNKALYAQVSLGM 308
Query: 290 RYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEI 348
R++M FE ED RR+ GTV G+ D P WK S+WR+L+V WDE + RP RVS WEI
Sbjct: 309 RFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEI 368
Query: 349 EPFVASATP-NLVQPVLAKNKRPRL-SMEVPPLDLPSA--ASAPW 389
EP + TP + P + K PR M LD+ +A + PW
Sbjct: 369 EPVI---TPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPW 410
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 968 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1026
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1027 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1057
>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
Length = 926
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/376 (46%), Positives = 233/376 (61%), Gaps = 48/376 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+ SMH+GVLA A+HA ++ +
Sbjct: 218 AKRLKAGDSVLFI-----------------------------SMHIGVLAAAAHAASSGS 248
Query: 258 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F +YY PRT S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG+ D+
Sbjct: 249 SFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGISDY 308
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR--- 369
P W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N +
Sbjct: 309 DPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKRQC 362
Query: 370 -PRLSMEVPPLDLPSA 384
P + VP +++ SA
Sbjct: 363 LPGYGVSVPGMEIGSA 378
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 823 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 881
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 882 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 912
>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
Length = 202
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 170/202 (84%), Gaps = 2/202 (0%)
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
AS TSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 1 ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++ SSVISS SMHLGVLAT
Sbjct: 61 QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120
Query: 249 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A HA+ T+TMF VYYKPRT S+FII +KY+++V N +++G R+KMRFEGE++PE+RF+
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFT 180
Query: 307 GTVVGVEDFSPHWKDSKWRSLK 328
GT+VG ++ W +S WRSLK
Sbjct: 181 GTIVGSDNLDQLWPESSWRSLK 202
>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
Length = 744
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/380 (45%), Positives = 222/380 (58%), Gaps = 49/380 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW CAG L +PK+G V YFPQGH+EQ AS++ I F LP +I CRVV
Sbjct: 52 IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTFDLPPQIFCRVV 110
Query: 78 NIHLMAEQETDEVYAQITLLPEP---------------------SQNEPTTPDPCPADSP 116
N+ L+A +E DEVY Q+TLLP+P PT P
Sbjct: 111 NVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTP------ 164
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+
Sbjct: 165 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 220
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE GEL +G+R R ++ +P S+I
Sbjct: 221 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSII 280
Query: 237 SSQSMHLGVLATASHAVATQTMF---VVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKM 293
+Q+ + VL+ A++AVAT++MF V+ K + N+ NKF + M ++
Sbjct: 281 GNQNSYPNVLSLAANAVATKSMFHGLKVFNKQTHLNMLQDGNQV-----NKFFLKMLPEI 335
Query: 294 RFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
++ SG V G+ D P+ W +SKWR L V+WD+ +RVSPWEI+P V
Sbjct: 336 H-NLQNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSV 394
Query: 353 ASATPNLVQPVLAKNKRPRL 372
+ P L+ PRL
Sbjct: 395 S-------LPPLSIQSSPRL 407
>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/373 (44%), Positives = 218/373 (58%), Gaps = 35/373 (9%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 52 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAA-------IYGLPPHVFCRILDVK 104
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 105 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 164
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 165 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 224
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GV R+ S + +++ + + T +
Sbjct: 225 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGV----RRASQIEGTLMPYRPIVFSAFTTTN 280
Query: 251 HAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
H A+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G +
Sbjct: 281 HNWASW-----------SNFIIPAPKFLKIVDYPFCIGMRFKARVESEDASERRSPGIIT 329
Query: 311 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V KR
Sbjct: 330 GISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEP--SGSISNSGSFVTTGPKR 387
Query: 370 PRLSMEVPPLDLP 382
R+ D+P
Sbjct: 388 SRIGFSSGKPDIP 400
>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
Length = 856
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 161/322 (50%), Positives = 218/322 (67%), Gaps = 8/322 (2%)
Query: 55 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA 113
TN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P Q + P
Sbjct: 1 TNKEVDTHIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQEQKDAYLPAEL 60
Query: 114 DSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 172
+P R + F K LTASDTSTHGGFSV R+ A + PPLD Q P+QEL+A+DLHG E
Sbjct: 61 GTPSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLHGNE 120
Query: 173 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 232
W+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD +F+ E +L +G+R R QS MP
Sbjct: 121 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQSVMP 180
Query: 233 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGM 289
SSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L +Y +AV + + +VGM
Sbjct: 181 SSVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRISVGM 240
Query: 290 RYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEI 348
R++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R RVS WEI
Sbjct: 241 RFRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSLWEI 300
Query: 349 EPFVASATPNLVQPVLAKNKRP 370
EP + P P + +RP
Sbjct: 301 EPL--TTFPMYPSPFPLRLRRP 320
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
+R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E
Sbjct: 722 DRTFVKVHKLG-SYGRSLDITNFSSYHELRSELASMFGLEGQLEDPLRSGWQLVFVDREN 780
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GDDPW EF N V I I S Q+V++M
Sbjct: 781 DVLLLGDDPWQEFVNNVWCIKILSPQEVQQM 811
>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
Length = 657
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 234/383 (61%), Gaps = 34/383 (8%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ RELW ACAGP+V +P++G +V Y PQ H+ + + LP + CRVV
Sbjct: 24 VCRELWHACAGPIVALPRRGSKVVYLPQAHLAAAGCGGDVAVA-------LPPHVACRVV 76
Query: 78 NIHLMAEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPK--VHSFS 124
++ L A+ TDEVYA++ L+ E ++ E T D D R + F
Sbjct: 77 DVELCADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDTED---GDGERKSRMLQMFC 133
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PLD Q P+QELVAKDLHG +WRF+HI+RGQPR
Sbjct: 134 KTLTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPR 193
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS S +
Sbjct: 194 RHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSKMN 253
Query: 245 VLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
L+ ++++ +++F + Y PR S+FI+ K+L+++N+ F +GMR+K+++ ED E
Sbjct: 254 ALSAVANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLNHPFCIGMRFKIQYGSEDVNE 313
Query: 303 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
RR SG + GV + P W S WRSL V+W++ +R+SPWEIE + + ++ Q
Sbjct: 314 RR-SGMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIE--IVGGSVSIAQ 370
Query: 362 PVLA-KNKRPRL----SMEVPPL 379
+ A +KR +L +++VP L
Sbjct: 371 SLPASSSKRTKLCSQSNLDVPTL 393
>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
Length = 634
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 212/350 (60%), Gaps = 54/350 (15%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P+ DDLY+ELW+ACAGPLV VP+ G++V Y+PQGHMEQ+EA NQ+ +P++ LPS
Sbjct: 37 PNDYHDDLYKELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVYNLPS 96
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-----EPTTPDPCPADSPRPKVHSFSK 125
KI C+V+N+ L AE TDEV+AQITLLPE Q+ E P P + + SFSK
Sbjct: 97 KIFCKVINVQLKAEAGTDEVFAQITLLPETKQDVLSLKEDGNSLPLPR---KADLRSFSK 153
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LT+SDTSTHGGFSVL++HA ECLPP+DM+ P Q LVAKD+H
Sbjct: 154 KLTSSDTSTHGGFSVLKRHAEECLPPMDMSGEPPEQMLVAKDMH---------------- 197
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
GENGEL +G+R + S+ +SVIS+ SM G+
Sbjct: 198 --------------------------GENGELRIGLRRAMKLHSNASTSVISAHSMQHGI 231
Query: 246 LATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
L+ A HA+ T ++F VYY+P T ++FII ++Y+E+ +++VG + M FE E+ E+
Sbjct: 232 LSMAFHAITTGSIFTVYYRPWTNPTEFIIPFDQYVESAELEYSVGTTFGMLFEVEECAEQ 291
Query: 304 RFSGTVVGVEDFS-PHWKDSKWRSLKVQWDEPA-SITRPDRVSPWEIEPF 351
R GT+VG ED W +S+WRSLK +WD + PDRVSPW I P
Sbjct: 292 RSEGTIVGNEDVDHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMIVPI 341
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 567 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKW 625
SQ K C +N S TKV G A GR++D+T GYD LI EL++MFD KG L + W
Sbjct: 539 SQCKNCCSFTNLSCTKVLKHGSA-GRSVDITKFDGYDKLIRELDQMFDFKGTLIDGSSGW 597
Query: 626 EIVYTDDEGDMML 638
E+ Y DDEGD+ML
Sbjct: 598 EVTY-DDEGDIML 609
>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/299 (51%), Positives = 207/299 (69%), Gaps = 10/299 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS++LC+V N+
Sbjct: 20 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPNLPSQLLCQVHNV 79
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE++AQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 80 TLHADKDTDEIHAQMSLQPVNSEKDVF---PVPDFGLKPSKHPSEFFCKALTASDTSTHG 136
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD + P+QELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 137 GFSVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 196
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA +
Sbjct: 197 GSKRLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLSADSMHIGVLAAAAHAAGNR 256
Query: 257 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S F+I L K+ + V + +VGMR+ M FE E+S +RR+ GT+VG+
Sbjct: 257 SPFTIFYNPRACPSDFVIPLIKFRKTVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGI 315
>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
Length = 674
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 227/378 (60%), Gaps = 24/378 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R+LW ACAGP+V +P++G V Y PQGH+ A + + + LP + CRVV++
Sbjct: 24 RDLWHACAGPVVSLPRRGSAVVYLPQGHLSA--AGAGGRIRGEVAV-ALPPHVACRVVDV 80
Query: 80 HLMAEQETDEVYAQITLLPEPSQNE----------PTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEVYA++ L E E + + +H F K LTA
Sbjct: 81 ELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTA 140
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLT
Sbjct: 141 SDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 200
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S + L+
Sbjct: 201 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAV 260
Query: 250 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+ ++ ++F + Y PR S++++ K++++ N+ +GMR+K +E ED ERR SG
Sbjct: 261 ADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHYESEDVNERR-SG 319
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
+ GV + P W SKWRSL V+W++ +RVSPWEIE + + ++ + A
Sbjct: 320 MIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISVAHSLSAS 377
Query: 367 NKR-----PRLSMEVPPL 379
+ + P+ +++VP L
Sbjct: 378 SSKRTKLCPQGNLDVPAL 395
>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
Length = 821
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 227/353 (64%), Gaps = 30/353 (8%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR------------GQ 182
HGGFSV R+ A PPL ++ S+ + LHG IF Q
Sbjct: 147 HGGFSVPRRAAERVFPPLVISHSSLQHRSL---LHG-------IFMMSSGNSGISSEASQ 196
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
P+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH
Sbjct: 197 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMH 256
Query: 243 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGED 299
+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+
Sbjct: 257 IGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEE 316
Query: 300 SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
S RR+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 317 SSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 369
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E D
Sbjct: 722 RTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDREND 780
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 669
++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 781 VLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 815
>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 230/380 (60%), Gaps = 28/380 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ R+LW ACAGP+V +P++G + Y PQ H+ + + LP + CRVV
Sbjct: 20 VCRDLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDAPVG-------LPPHVACRVV 72
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPK--VHSFSKVL 127
++ L A+ TDEVYA++ L+ E E D D R +H F K L
Sbjct: 73 DVELCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVDGERKSRMLHMFCKTL 132
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHL 192
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S + L+
Sbjct: 193 LTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLS 252
Query: 248 TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+++ +++F + Y PR S+FI+ K+L+++N F +GMR+K+++ ED ERR
Sbjct: 253 AVVNSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERR- 311
Query: 306 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
SG + G+ + P W SKW+SL V+W++ +R+SPWEIE + + ++ Q +
Sbjct: 312 SGMITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIE--IVGGSVSIAQSLS 369
Query: 365 AKNKR-----PRLSMEVPPL 379
A + + P+ +++VP L
Sbjct: 370 ASSSKRTKLCPQGNLDVPTL 389
>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
Length = 680
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 224/374 (59%), Gaps = 19/374 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAG V +P++G V Y PQ H+ L P R+P ++CRVV++
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGGLAPAPP--RVPPHVVCRVVDVE 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTAS 130
L A+ TDEVYA++ L+ + D D K H+ F K LTAS
Sbjct: 78 LRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +
Sbjct: 198 GWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVA 257
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ ER F G
Sbjct: 258 NSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANERSF-GL 316
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+ +
Sbjct: 317 IIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLSSS 373
Query: 368 KRPRLSMEVPPLDL 381
R + PP DL
Sbjct: 374 VSKRTKLCFPPSDL 387
>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1092
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 167/341 (48%), Positives = 226/341 (66%), Gaps = 11/341 (3%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E + IP + LPSK++C
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSKLICM 77
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL P + E R F K LTASDTST
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTST 137
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPL+MN + L++ +H IF GQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLNMNMNVVI--LISLQIHK---NVHCIFSGQPKRHLLTTGWSV 192
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A
Sbjct: 193 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 252
Query: 255 TQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
+ F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 253 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 312
Query: 313 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
D S WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 313 SDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 353
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 965 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1023
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1024 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1054
>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 731
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/380 (41%), Positives = 226/380 (59%), Gaps = 24/380 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ R+LW ACAGP+V +P++G V Y PQGH+ A + L P + CRVV
Sbjct: 79 VCRDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVAL---PPHVACRVV 135
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE----------PTTPDPCPADSPRPKVHSFSKVL 127
++ L A+ TDEVYA++ L E E + + +H F K L
Sbjct: 136 DVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTL 195
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHL
Sbjct: 196 TASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHL 255
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S + L+
Sbjct: 256 LTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLS 315
Query: 248 TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+ ++ ++F + Y PR S++++ K++++ N+ +GMR+K FE ED ERR
Sbjct: 316 AVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERR- 374
Query: 306 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
SG + GV + P W SKWRSL V+W++ +RVSPWEIE + + ++ +
Sbjct: 375 SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISVAHSLS 432
Query: 365 AKNKR-----PRLSMEVPPL 379
A + + P+ +++VP L
Sbjct: 433 ASSSKRTKLCPQGNLDVPAL 452
>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
Length = 831
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 211/355 (59%), Gaps = 60/355 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPAD------------------SPR 117
++ + A+ ETDEVYAQ+TL P P + D C A+ S +
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQ 147
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+H
Sbjct: 148 P-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRH 206
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
IFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+S
Sbjct: 207 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 266
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
S SMH+G+LA A+HA AT + F ++Y P
Sbjct: 267 SDSMHIGLLAAAAHAAATNSRFTIFYNP-------------------------------- 294
Query: 298 EDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 351
R+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 295 ------RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 343
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 693 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 751
Query: 634 GDMMLVGDDPWHEFCNMVKRI 654
D++L+GDDPW EF N+ +
Sbjct: 752 NDVLLLGDDPW-EFINIYMNV 771
>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
Length = 680
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 223/374 (59%), Gaps = 19/374 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAG V +P++G V Y PQ H+ P R+P ++CRVV++
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPP--RVPPHVVCRVVDVE 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTAS 130
L A+ TDEVYA++ L+ + D D K H+ F K LTAS
Sbjct: 78 LRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +
Sbjct: 198 GWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVA 257
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ ER F G
Sbjct: 258 NSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDANERSF-GL 316
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S LV L+ +
Sbjct: 317 IIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSV---LVTHRLSSS 373
Query: 368 KRPRLSMEVPPLDL 381
R + PP DL
Sbjct: 374 VSKRTKLCFPPSDL 387
>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 632
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 225/378 (59%), Gaps = 16/378 (4%)
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSP------ 116
+P + CRVV+++L A+ TDEVYAQ++LL + + + + + C D
Sbjct: 32 VPPHVFCRVVDVNLQADPATDEVYAQVSLLVDNEEAKRRMRQGESEEACDGDGEDTGAAK 91
Query: 117 -RPKV-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
R ++ H F K LTASDTSTHGGFSV R+ A +C PPLD N P+QELVAKDLHG EWR
Sbjct: 92 RRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDLHGTEWR 151
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+G L +GVR A+ ++ P
Sbjct: 152 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQLKNVSPFP 211
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 292
+ +Q L L +HAVA +++F +YY PR S+FI+ K++ + + F+VGMR+K
Sbjct: 212 ALFNQDSSLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFK 271
Query: 293 MRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
M++E ED+ ERR +G + G + SKW+ L V+WD+ R +RVSPWEIE
Sbjct: 272 MKYENEDASERRSTGMITGSRESDLKSHGSKWKCLVVRWDDDVECRRLNRVSPWEIELAG 331
Query: 353 ASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRID 412
+ + +L P +K +P L P + LPS + + A A+ H + Q K D
Sbjct: 332 SVSGSHLSSP-HSKRLKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQGQELLGSKAHD 390
Query: 413 NHVAWHHKHSDFSSNSNF 430
V + S S NF
Sbjct: 391 GTVNSASEASQASEARNF 408
>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 223/374 (59%), Gaps = 19/374 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAG V +P++G V Y PQ H+ P R+P ++CRVV++
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPP--RVPPHVVCRVVDVE 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTAS 130
L A+ TDEVYA++ L+ + D D K H+ F K LTAS
Sbjct: 78 LRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +
Sbjct: 198 GWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVA 257
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ ER F G
Sbjct: 258 NSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDANERSF-GL 316
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+ +
Sbjct: 317 IIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLSSS 373
Query: 368 KRPRLSMEVPPLDL 381
R + PP DL
Sbjct: 374 VSKRTKLCFPPSDL 387
>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 223/374 (59%), Gaps = 19/374 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAG V +P++G V Y PQ H+ P R+P ++CRVV++
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGVSAPAPP--RVPPHVVCRVVDVE 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTAS 130
L A+ TDEVYA++ L+ + D D K H+ F K LTAS
Sbjct: 78 LRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +
Sbjct: 198 GWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVA 257
Query: 251 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ ER F G
Sbjct: 258 NSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANERSF-GL 316
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 367
++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+ +
Sbjct: 317 IIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLSSS 373
Query: 368 KRPRLSMEVPPLDL 381
R + PP DL
Sbjct: 374 VSKRTKLCFPPSDL 387
>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
from Arabidopsis thaliana gb|AF186466 [Arabidopsis
thaliana]
Length = 1062
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 177/390 (45%), Positives = 236/390 (60%), Gaps = 38/390 (9%)
Query: 11 PSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF- 66
PSSN + + +LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP +
Sbjct: 10 PSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYP 68
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 126
LPSK++C + ++ L A+ ETDEVYAQ+TL P N R F K
Sbjct: 69 NLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKLN-------------RQPTEFFCKT 115
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A + PPLD + P QE+VAKDLH W F+HI+RG
Sbjct: 116 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRG----- 170
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
WS FV++KRL AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+L
Sbjct: 171 -----WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGIL 225
Query: 247 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
A A+HA A + F +++ PR S+F++ L KY +A+ + ++GMR++M FE ED RR
Sbjct: 226 AAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRR 285
Query: 305 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQP 362
+ GTV G+ D P WK S+WR+L+V WDE + RP RVS WEIEP + TP + P
Sbjct: 286 YMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYICPP 342
Query: 363 VLAKNKRPRL-SMEVPPLDLPSA--ASAPW 389
+ K PR M LD+ +A + PW
Sbjct: 343 PFFRPKYPRQPGMPDDELDMENAFKRAMPW 372
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 934 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 992
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 993 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1023
>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
Length = 1136
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/362 (46%), Positives = 228/362 (62%), Gaps = 24/362 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQL------EASTNQELNQRIPLF-RLPSKIL 73
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLPSKLI 103
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDT 132
C + ++L A+ +TDEVYAQ+TL P + E RP++ F K LTASDT
Sbjct: 104 CLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDT 163
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSV R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGW
Sbjct: 164 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGW 223
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+ KRL AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA
Sbjct: 224 SLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHA 283
Query: 253 VATQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 309
A + F ++Y PR S +F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+
Sbjct: 284 AANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTI 343
Query: 310 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
G+ D P V WDE A+ R +RVS WEIEP VA+ QP KR
Sbjct: 344 TGISDLDP-----------VGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KR 390
Query: 370 PR 371
PR
Sbjct: 391 PR 392
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 444 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 502
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 880 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 931
Query: 503 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 558
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 932 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 983
Query: 559 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 618
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 984 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1042
Query: 619 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1043 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1092
>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
Length = 811
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 195/268 (72%), Gaps = 9/268 (3%)
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD NQ P+QEL+AKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 1 ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV K LV+GD +FLR ENGEL +G+R +RQQS +PSSV+SSQSMHLGVLA
Sbjct: 61 TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120
Query: 249 ASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 306
A++AV+T++MF ++Y PR S +FII KY+++ + ++GMR+KMRFE ED+ ERR++
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQPLSIGMRFKMRFETEDAAERRYT 180
Query: 307 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
G + G+ D P W SKWRSL V WDE A+ + +RVSPWEIEP ++ + L P +
Sbjct: 181 GIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPSISVS--GLSIPSCS 238
Query: 366 KNKRPRLSMEVPPLDLPSAASAPWSARL 393
+ KR R ++ P+D S P RL
Sbjct: 239 RIKRLRTNLPSTPVDF----SVPDGGRL 262
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 14/190 (7%)
Query: 493 RKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGH--------IISTISAAADS 542
R + SC+LFGI LI A S +P + +G + S+I+ + D
Sbjct: 572 RDIQGKHSCKLFGISLIKEPACMDDAISSGIPPDGVAQDGSHATYGRGLVQSSIAQSQDQ 631
Query: 543 DGKSDI---AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 599
K + + K EQ + K S+ S RS TKV QG AVGRA+DL+ L
Sbjct: 632 LLKDSLDHPGRSACLKGSEQQMTTQKVSKGPTLVQASGRSCTKVHKQGNAVGRAVDLSKL 691
Query: 600 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
GYD LI ELE +F+++G L+ K W++VYTD E DMMLVGDDPW EFCN+V +I I +
Sbjct: 692 DGYDELISELERLFNMEGLLNDPDKGWQVVYTDSEDDMMLVGDDPWQEFCNIVCKILIYT 751
Query: 659 SQDVKKMSPG 668
+++KK +PG
Sbjct: 752 HEELKKWTPG 761
>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
Length = 688
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 208/345 (60%), Gaps = 22/345 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ RELW ACAGP+V +P++G V Y PQGH+ N ++ LP + CRV
Sbjct: 21 VCRELWHACAGPVVALPRRGSLVVYLPQGHLAA-AGGGNVAVD-------LPPHVACRVA 72
Query: 78 NIHLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVL 127
++ L A+ TDEVYA++ L+ E + + + +H F K L
Sbjct: 73 DVELCADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKSRMLHMFCKTL 132
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHL 192
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ S S L
Sbjct: 193 LTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFSCDSTKRHTLL 252
Query: 248 TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+ ++ +++F + Y PR S++II +K+L+++N F +G R ++ ED ERR
Sbjct: 253 AVADSLKHKSVFHISYNPRATASEYIIPHHKFLKSLNLPFCIGARINLQCHNEDVSERR- 311
Query: 306 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
SG VV V + P W SKWRSL V+W++ DRVSPWEIE
Sbjct: 312 SGMVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIE 356
>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 683
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 204/343 (59%), Gaps = 22/343 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ LP ++CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEV A++ L+ E + A+ +H F K LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 250 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+ ++ +++F + Y PR S++II K+L+++N+ +G R + ED ERR SG
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SG 313
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 314 VVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
Length = 686
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 204/343 (59%), Gaps = 22/343 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ LP ++CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEV A++ L+ E + A+ +H F K LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 250 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+ ++ +++F + Y PR S++II K+L+++N+ +G R + ED ERR SG
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SG 313
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 314 VVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 393
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 204/343 (59%), Gaps = 22/343 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ LP ++CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEV A++ L+ E + A+ +H F K LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 250 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+ ++ +++F + Y PR S++II K+L+++N+ +G R + ED ERR SG
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SG 313
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 314 VVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 230/398 (57%), Gaps = 24/398 (6%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
M L ++ + + + ELW ACAGP V +P++G V Y PQ H+ A+ +
Sbjct: 1 MGIDLNTVEEDGETAGAVCGELWHACAGPGVALPRRGSAVVYLPQAHL----AAGGGDAP 56
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ---------NEPTTPDPC 111
+P + CRVV + L A+ TDEVYA++ L+ E +E +
Sbjct: 57 APAGRAHVPPHVACRVVGVELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMA 116
Query: 112 PADSP-RPKV-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 169
D +P++ H F K LTASDTSTHGGFSV R+ A +C LD Q P+QELVAKDLH
Sbjct: 117 AGDGENKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLH 176
Query: 170 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS 229
G +WRF+HI+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++
Sbjct: 177 GTQWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRN 236
Query: 230 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAV 287
+++ L L+ + ++ +++F V + PR+ S+FI+ ++ +++N+ F++
Sbjct: 237 EALFEAVNTNDSKLHTLSAVASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHTFSI 296
Query: 288 GMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 346
GMR+K+ E +D+ ER +G + G+ + P W SKWR L V+WD+ RVSPW
Sbjct: 297 GMRFKVSNESDDANERS-TGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPW 355
Query: 347 EIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPLDLP 382
EIE S + V L + +KR +L LD P
Sbjct: 356 EIERVGGSIS---VTDCLSASSSKRAKLYFPQGNLDAP 390
>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
Length = 658
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 202/328 (61%), Gaps = 14/328 (4%)
Query: 87 TDEVYAQITLLP-----EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTASDTSTH 135
TDEVYAQ++L+ E E C + P H F K LTASDTSTH
Sbjct: 40 TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTH 99
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A +C PPLD + P QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 100 GGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGF 159
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
+ K+LV+GD +FLRGE+GEL +GVR A+ +++ P + +Q + L+ +HAVA
Sbjct: 160 INKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAV 219
Query: 256 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 313
+++F +YY PR SQ FII K++ + + F+VGMR+K+R+E ED+ ERR +G ++G
Sbjct: 220 KSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGSR 279
Query: 314 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
+ P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K +
Sbjct: 280 EADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSKRLKSCFP 338
Query: 374 MEVPPLDLPSAASAPWSARLAQSHNLTQ 401
P + LP+ + + A A+ H + Q
Sbjct: 339 QVNPDIVLPNGSVSSDFAESARFHKVLQ 366
>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
Length = 668
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 220/373 (58%), Gaps = 20/373 (5%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R+LW ACAGP+V +P++G V Y PQGH+ A + L P + CRVV++
Sbjct: 24 RDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVAL---PPHVACRVVDV 80
Query: 80 HLMAEQETDEV-----YAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
L + V Y + TL + E D R +H F K LTASDTST
Sbjct: 81 ELCVSEPLSLVVGFSLYLRGTLHGGGIEREDDMEDGDEERKSR-MLHMFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLTTGWS+
Sbjct: 140 HGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSS 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S + L+ + ++
Sbjct: 200 FVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLK 259
Query: 255 TQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 312
++F + Y PR S++++ K++++ N+ +GMR+K FE ED ERR SG + GV
Sbjct: 260 HGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERR-SGMIAGV 318
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR-- 369
+ P W SKWRSL V+W++ +RVSPWEIE + + ++ + A + +
Sbjct: 319 SEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISVAHSLSASSSKRT 376
Query: 370 ---PRLSMEVPPL 379
P+ +++VP L
Sbjct: 377 KLCPQGNLDVPAL 389
>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
Length = 744
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 204/327 (62%), Gaps = 17/327 (5%)
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPK 119
+I+CRVV++ L AE DE+YAQ++LL E S N R
Sbjct: 1 QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDL+G+ WRF+HI+
Sbjct: 61 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIY 120
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISS 238
RGQPRRHLLTTGWS+F K+L GD +FLR ++GEL +G+R RQ Q +P + +
Sbjct: 121 RGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLC 180
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFE 296
Q + +L+ + A++ + +F +YY PR S +F++ KYL + ++ F++GMR K+R E
Sbjct: 181 QLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVE 240
Query: 297 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
ED+ E+R++G + GV D P W +SKWR L V+WD+ A DRVSPWEIE +S
Sbjct: 241 TEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQ--SSL 298
Query: 356 TPNLVQPVLAKNKRPRLSMEVPPLDLP 382
+ P+ + +KRP+++ D+P
Sbjct: 299 VSSFSFPLKSTSKRPKMNFPSIITDIP 325
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 494 KTETGTSCRLFGIELINHATSS--APSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 551
+T + +CRLFG L S P ++ VS L +++ +D
Sbjct: 566 ETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGMTSHQTFPPTD-------- 617
Query: 552 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
K + +SP S Q S R TKV Q VGRA+DLT L GYD LI ELE
Sbjct: 618 ---PKISGIHLSPNSGGSLQP---STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELER 671
Query: 612 MFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
+ D++G L R W++VYTD+ DMMLVGD+PW EFC++V +I I + ++V
Sbjct: 672 LLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 723
>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
Length = 690
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 234/709 (33%), Positives = 333/709 (46%), Gaps = 114/709 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW+ACAG +V +P V+YFPQGH E ++ N QRIP S ILCRV +
Sbjct: 12 QLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPVN--FPQRIP-----SLILCRVATVK 64
Query: 81 LMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKVHSFSKVLTA 129
+A+ +TDEVYA+I +P P+ + D CP D P SF+K LT
Sbjct: 65 FLADPDTDEVYAKIGFVPLPNTDLDFAHDRGLCGNGNDGDSCP-DKPA----SFAKTLTQ 119
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGTPRRHLLT 179
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------CLARQQSSMPSS-------- 234
TGWSTFV K+LVAGD+ VFLR ENG+L VG+R +R +SS+ +
Sbjct: 180 TGWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGWNSNNATC 239
Query: 235 ---------VISSQSMHLG------------VLATASHAVATQTMFVVYYKPRTS--QFI 271
+ M G VL A A + VVYY PR+S +F
Sbjct: 240 AIPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQVVYY-PRSSTPEFC 298
Query: 272 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 329
+ + A+ + GMR+KM FE EDS F GTV V+ P W +S WR L+V
Sbjct: 299 VKASSVRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVADPVRWPNSPWRLLQV 358
Query: 330 QWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----LPS 383
WDEP + RVSPW +E + S P + + P K+ R ++ PLD LPS
Sbjct: 359 AWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPPRKKSRFPQQLGFPLDLQFQLPS 416
Query: 384 AASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTS 443
+ P L S + LS ++ A H + S+ F ++ QS G +L+S
Sbjct: 417 FSGNP----LGPSSPMCCLS---DNTPAGIQGARHAQFGISLSDIQFNNKQQS-GMFLSS 468
Query: 444 -----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETG 498
P + S+ + N+NIS G+S P+ LE+ + +K +
Sbjct: 469 LQRFNPHSRNSETYLTGHTNSNENISCL-LTMGNSNPN---------LEKSDNVKKHQF- 517
Query: 499 TSCRLFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
LFG I + H + S ++ VS + E + S+ SD+ KK
Sbjct: 518 ---LLFGQPILIEQHISHSCSTDA--VSQVINERNSSDESSSKEK---ISDVLLSAPGKK 569
Query: 557 QEQVQ-----VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
QV+ S +S S + + KV ++ VG LDL+ L Y+ L +L
Sbjct: 570 ISQVKSCGTGFSWHQSLHNTSEIGKDTGPCKVFLESEDVGWTLDLSALCSYEELHGKLAN 629
Query: 612 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
MF I+ + ++Y D G + +GD+P+ F KR+ I +Q
Sbjct: 630 MFGIE---RSEMSSHVLYRDATGSVKQIGDEPFSVFMKTAKRLTILMNQ 675
>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
Length = 1183
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 198/334 (59%), Gaps = 42/334 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPLV +P G V YFPQGH EQ
Sbjct: 93 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQ------------------------------ 122
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
A+ ETDEVYAQ+TL +P E R V F K LTASDTSTHGGFSV
Sbjct: 123 --ADAETDEVYAQMTL--QPYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGFSV 178
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++KR
Sbjct: 179 PRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKR 238
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
L AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A + F
Sbjct: 239 LFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSPFT 298
Query: 261 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 318
++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ +
Sbjct: 299 IFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELRCC 358
Query: 319 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
+ K +P++ RP RVS WEIEP V
Sbjct: 359 AME------KFTMAQPSAGERPSRVSIWEIEPVV 386
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1056 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1114
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1115 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1145
>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
Length = 676
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 218/375 (58%), Gaps = 19/375 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP V +P+QG + Y PQGH+ + P+ P + CRV+++
Sbjct: 26 ELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGEVAGAAPPV---PPHVACRVLDVE 82
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC--------PADSPRPKV-HSFSKVLTASD 131
L A+ TDEVYA++ L+ + + +P++ H F K LTASD
Sbjct: 83 LCADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPRMPHMFCKTLTASD 142
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHLLTTG 202
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS+FV K+LV+GD +FLRG +GEL +G+R + ++ ++S L+ +
Sbjct: 203 WSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQRTLSAVAS 262
Query: 252 AVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
+ ++ F V + PR+ S+FI+ K+ +++N+ ++GMR+K+ +E ED+ ER +G +
Sbjct: 263 SFRNRSTFHVCFDPRSGASEFIVPYWKFSKSLNHPLSIGMRFKLSYESEDANERS-TGMI 321
Query: 310 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN- 367
GV + P W SKWR L V+WD R+SPWEIE ++ + A N
Sbjct: 322 SGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIE--RVGGMNSVTHSLSASNS 379
Query: 368 KRPRLSMEVPPLDLP 382
KR +LS LD P
Sbjct: 380 KRTKLSFPESNLDAP 394
>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
Length = 687
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 223/376 (59%), Gaps = 20/376 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP V +P++G + Y PQ H L A +P + CRVV +
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAH---LAADGGGGEVPPAGAAAVPPHVACRVVGVE 79
Query: 81 LMAEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEVYA++ L+ E ++ + C A+ H F K LTA
Sbjct: 80 LRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTA 139
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG +W+F+HI+RGQPRRHLLT
Sbjct: 140 SDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLT 199
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
GWS+FV K+LV+GD +FLRG++G+L +GVR + ++ ++S L +L++
Sbjct: 200 IGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSV 259
Query: 250 SHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+ ++ +++F + + PR+ S+FI+ + L+++N+ F++GMR+++ +E ED+ ER +G
Sbjct: 260 ASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANERS-AG 318
Query: 308 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 366
+ G+ + P W S+W+ L V+WD+ + +RVSPWEIE S + + + +
Sbjct: 319 LISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVS--VTHSLSSG 376
Query: 367 NKRPRLSMEVPPLDLP 382
+KR +L LD P
Sbjct: 377 SKRTKLHFPQGSLDTP 392
>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
Length = 552
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 195/343 (56%), Gaps = 57/343 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ Q ++ LP + CR++++
Sbjct: 51 ELWHACAGPLISLPKRGSLVLYFPQGHLEQ------QAPGFSAAIYGLPPHVFCRILDVK 104
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC-----PADSPRPKV-------HSFSKVLT 128
L AE +TDEVYAQ++LLPE E + D +V H F K LT
Sbjct: 105 LHAETDTDEVYAQVSLLPESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTPHMFCKTLT 164
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD ++ P+QEL+A+DLHG EWRF+HI+RGQPRRHLL
Sbjct: 165 ASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRGQPRRHLL 224
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+ + +
Sbjct: 225 TTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASAFSAQYNQNTNHNNFSE 284
Query: 249 ASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 308
+HA++T + F +YY P++ G
Sbjct: 285 VAHAISTNSAFNIYYNPKS--------------------------------------LGI 306
Query: 309 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
+ G+ D P W SKWR L V+WD+ + RVSPWEIEP
Sbjct: 307 ITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEP 349
>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
Length = 679
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 218/392 (55%), Gaps = 85/392 (21%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++S L ELW ACAGP++ +PK+G V YFPQGH+E + Q+L +P +P
Sbjct: 36 PSASSVCL--ELWHACAGPMICLPKKGSVVVYFPQGHLELV-----QDLQLLLP--NIPP 86
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV---------- 120
+ CRVV++ L AE+ +DEVY Q+ L+PE Q + + +
Sbjct: 87 HVFCRVVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSST 146
Query: 121 -HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+
Sbjct: 147 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIY 206
Query: 180 RG--------QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 231
RG QPRRHLLTTGWS FV K+LV+GD +FLR
Sbjct: 207 RGVSLMSHVWQPRRHLLTTGWSGFVNKKKLVSGDAVLFLR-------------------- 246
Query: 232 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRY 291
A+ + F+V ++K+L++++ ++ GMR+
Sbjct: 247 ----------------------ASSSEFIV-----------PIHKFLKSLDYSYSAGMRF 273
Query: 292 KMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
+MRFE +D+ ERR +G +VG+ D P W SKW+ L V+WD+ TR +RVSPWEIEP
Sbjct: 274 RMRFETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDD-LEATRNNRVSPWEIEP 332
Query: 351 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 382
+++ PN + + A KR R+ + L+ P
Sbjct: 333 SGSASIPNNL--MAASLKRTRIGLPSTQLEFP 362
>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
Length = 1096
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 220/357 (61%), Gaps = 37/357 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPS++LC + N+
Sbjct: 29 ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 88
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGF
Sbjct: 89 TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 148
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RG
Sbjct: 149 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRG----------------- 191
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 192 ------------RDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 239
Query: 259 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F V+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 240 FTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 299
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 371
P WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 300 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 354
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLV 639
KV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D++LV
Sbjct: 988 KVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 1046
Query: 640 GDDPWHEFCNMVKRIFICSSQDVKKMS 666
GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1047 GDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
Length = 973
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/374 (43%), Positives = 214/374 (57%), Gaps = 70/374 (18%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R + PS V+ A + AT
Sbjct: 218 AKRLKAGDSVLFIR------------------TSPSPF---------VIPVARYNKAT-- 248
Query: 258 MFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
Y +P +VGMR+ M FE E+S +RR++GTVVG+ D+ P
Sbjct: 249 ----YMQP--------------------SVGMRFAMMFETEESSKRRYTGTVVGISDYDP 284
Query: 318 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR----P 370
W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N + P
Sbjct: 285 MRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKRQCLP 338
Query: 371 RLSMEVPPLDLPSA 384
+ VP L++ SA
Sbjct: 339 GYGVSVPGLEIGSA 352
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 797 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 855
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
++LVGDDPW EF N V+ I I S +V++M G +L
Sbjct: 856 VLLVGDDPWEEFINCVRCIRILSPSEVQQMRVGMQL 891
>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 630
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 160/366 (43%), Positives = 213/366 (58%), Gaps = 58/366 (15%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN--QELNQRIPLFRLPSKIL 73
D LY ELW+ACAG V VP++ + V YFPQGH+EQ+ A T Q+ + IP++ LPSKIL
Sbjct: 19 DSLYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHMEIPVYDLPSKIL 78
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKVHSFSKVLTA 129
C++++I L AE +DEVYAQ+TL+P Q+ E D P+ + ++FSK+LT
Sbjct: 79 CKIMHIELKAEAFSDEVYAQVTLVPALKQDNLRLEVEENDQIPSIT---TTYTFSKILTP 135
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV +KHA EC PPLDM Q TP QE+VAKDL+G
Sbjct: 136 SDTSTHGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNG------------------- 176
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS--SMPSSVISSQSMHLGVLA 247
E+GE+ VG+R S S SS+IS SM LG+LA
Sbjct: 177 ----------------------AESGEIRVGIRRATEHLSNVSQSSSLISGHSMQLGILA 214
Query: 248 TASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+ASHAV++ TMF+VYY P T+ +FI+ L YL++ + +GMR +M+ E E+S RR
Sbjct: 215 SASHAVSSGTMFIVYYHPWTNPFEFIVPLRTYLKSTVPDYPIGMRVQMQHEVEES-LRRH 273
Query: 306 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA-SITRPDRVSPWEIEPFVASATPNLVQPV 363
+GT++G ED W S+WR LKVQWD P+RV PW IEP ++ V P
Sbjct: 274 AGTIIGHEDIDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIEPLESAKEKKQV-PA 332
Query: 364 LAKNKR 369
L K+
Sbjct: 333 LPTTKK 338
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 560 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 619
++V+P ++ K+ +NRS TKV G A+GRA+DL GY LI EL+ MF+ +G L
Sbjct: 514 MRVAPGKT-CKKCHRVNNRSCTKVLKLGTALGRAVDLARFHGYTELIAELDSMFEFRGSL 572
Query: 620 -HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
+ + W + DD+GDMM +GD PW +F +V+++ IC + + P S
Sbjct: 573 INESSGWHVTCMDDDGDMMQLGDYPWQDFQGVVQKMIICPKEGTNNIKPSS 623
>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
Length = 975
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 204/337 (60%), Gaps = 42/337 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPLV +P G V YFPQGH EQ ++I
Sbjct: 36 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQF-------------------------LDIK 70
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L D+ + L E + +P RP+ F K LTASDTSTHGGFSV
Sbjct: 71 LTVN--GDQYGKEALQLSELALKQP-----------RPQTEFFCKTLTASDTSTHGGFSV 117
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KR
Sbjct: 118 PRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKR 177
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
L+AGD+ +F+R E +L +G R RQ +++ SSV+SS SMH+G+LA A+HA A + F
Sbjct: 178 LLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFT 237
Query: 261 VYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 317
++Y PR S +F++ KY +A+ N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 238 IFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDP 297
Query: 318 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
WK+S+WR+++V WDE A+ R +RVS WEIEP A
Sbjct: 298 VRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPVAA 334
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 635
R+ TKV +G AVGR++D++ GYD L L MF ++GQL R + W++VY D E D
Sbjct: 842 RTFTKVYKRG-AVGRSIDISQFSGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 900
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++L+GDDPW EF N VK I I S Q+V+++S
Sbjct: 901 ILLLGDDPWEEFVNCVKCIRILSPQEVQQIS 931
>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
Length = 709
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 233/709 (32%), Positives = 328/709 (46%), Gaps = 121/709 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E ++ + R+PS +LCRV +
Sbjct: 11 QLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPVDFSS-------RIPSLVLCRVAGVK 63
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDP---CPADS----PRPKVHSFSKVLTASDTS 133
+A+ ETDEVYA+I+L P PS NE D C + K SF+K LT SD +
Sbjct: 64 YLADSETDEVYAKISLFPLPS-NELDFGDEIGLCDTSTNGTNSTEKPTSFAKTLTQSDAN 122
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 123 NGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 182
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-------QSSMPSSVIS--------- 237
TFV K+LVAGD+ VFLR E+G+L VG+R R +SS PS +
Sbjct: 183 TFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNASCVNPYT 242
Query: 238 -----------SQSMHLG-------------VLATASHAVATQTMFVVYYKPRTS--QFI 271
S+ + G VL +A+ A Q VVYY PR S +F
Sbjct: 243 GGFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFEVVYY-PRASTPEFC 301
Query: 272 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 329
+ + + ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V
Sbjct: 302 VKASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPIRWPNSPWRLLQV 361
Query: 330 QWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----LPS 383
WDEP + RVSPW +E + S P + + P K+ RL + PLD LPS
Sbjct: 362 TWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPPRKKLRLPQHLDFPLDGQFQLPS 419
Query: 384 AASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFS-SNSNFMSRTQSDGEW 440
+ P L S L LS DN A +H+ F S S+ G +
Sbjct: 420 FSGNP----LGPSSPLCCLS--------DNTPAGIQGARHAQFGISLSDLQLNKLQSGLF 467
Query: 441 LTS-----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 495
L+S + S+ + + N+N+S G+S + K +N + V
Sbjct: 468 LSSLQRFNSHSRVSESFMKSNTNSNENLSCLLTM-GNSNTNSEKSDNVKRHQFV------ 520
Query: 496 ETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEK 555
LFG ++ S VS ++S ++ +S K+ I
Sbjct: 521 -------LFGQPILTEQQISRSCSTDAVS------QVLSKKLSSDESPEKAKIHDVLGST 567
Query: 556 KQEQVQVSPKESQSK----QSCLTS----NRSRTKVQMQGVAVGRALDLTTLVGYDHLID 607
++ Q SP++S S QS T+ + KV ++ VGR LDL+ L Y+ L
Sbjct: 568 PEK--QTSPEKSASTGLSWQSLHTTETGLDAGHCKVFLESEDVGRTLDLSVLGSYEELYS 625
Query: 608 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
L MF I+ + ++Y D G + GD+P+ F KR+ I
Sbjct: 626 RLANMFGIE---RSEMLHHVLYRDAAGAIRQTGDEPFSVFAKTAKRLTI 671
>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
Length = 708
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 233/707 (32%), Positives = 331/707 (46%), Gaps = 120/707 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW+ACAG +V +P +V+YFPQGH E ++ + QRIP S +LCRV ++
Sbjct: 12 QLWQACAGSMVQIPPLNTKVFYFPQGHAEHSQSPV--DFPQRIP-----SLVLCRVASVK 64
Query: 81 LMAEQETDEVYAQITLLPEP------SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+A+ TDEV+A+I+L+P P SQ+ D +++ K SF+K LT SD +
Sbjct: 65 FLADPGTDEVFAKISLVPLPDADLDISQDVDICGDGNDSNNAE-KPASFAKTLTQSDANN 123
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P LD + P Q L+AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPRRHLLTTGWST 183
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG---------- 244
FV K+LVAGD+ VFLR ENG+L VG+R A++ + S SS S H+G
Sbjct: 184 FVNQKKLVAGDSIVFLRAENGDLCVGIR-RAKRGVGIGSGPESSPS-HIGWNSNNATSAN 241
Query: 245 -----------------------------VLATASHAVATQTMFVVYYKPRTS--QFIIS 273
VL A A VVYY PR S +F +
Sbjct: 242 PYGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVVYY-PRASTPEFCVK 300
Query: 274 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 331
+ A+ + GMR+KM FE EDS F GTV V+ P W +S WR L+V W
Sbjct: 301 ASSVRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVADPDRWPNSPWRLLQVTW 360
Query: 332 DEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----LPSAA 385
DEP + VSPW +E + S P + + P K+ R ++ PLD LPS +
Sbjct: 361 DEPDLLQTVKCVSPWLVE--LVSNMPVIHLSPFSPPRKKLRFPQQLDFPLDGQFQLPSFS 418
Query: 386 SAPWSARLAQSHNLTQLS-VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTS- 443
P L S L LS T + H + SDF F + QS G +L+S
Sbjct: 419 GNP----LGPSSPLCCLSDNTPAGIQGARHAQFGISLSDF----QFKKKLQS-GLFLSSL 469
Query: 444 ----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGT 499
PR K S+ D NKN+S G S P LE+ + +K +
Sbjct: 470 QRFNPRTKNSENYPTGHPDSNKNLSCL-LTKGSSNPK---------LEKSDNAKKHQF-- 517
Query: 500 SCRLFGIEL-----INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI-----A 549
LFG + I+H+ S+ +V + S+ ++ + SD+
Sbjct: 518 --LLFGQPILVEQQISHSCSADAFPQV----------VNERNSSDSNREKNSDVLRSAPG 565
Query: 550 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 609
K+ ++K S +S S + K ++ +GR LDL+ L Y+ L +L
Sbjct: 566 KQISQEKSCTTGFSWHQSLQNTSENGMDTGHCKAFLESEDLGRTLDLSALHSYEELRRKL 625
Query: 610 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
MF I+ + ++Y D G + +GD+P+ F KR+ I
Sbjct: 626 AIMFGIE---RSDMLSHVLYRDVTGAVKQIGDEPFSVFMKTAKRLTI 669
>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
Length = 1474
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 203/303 (66%), Gaps = 15/303 (4%)
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS----- 122
LPSK++C + N+ L A+ ET+EVYAQ+TL P + D A K++
Sbjct: 354 LPSKLICMLQNVTLNADPETEEVYAQMTLQPVNKYDR----DALLASDMGLKINRQPNEF 409
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HIFRGQ
Sbjct: 410 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRGQ 469
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
P+RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+R RQQ ++ SSVISS SMH
Sbjct: 470 PKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMH 529
Query: 243 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+
Sbjct: 530 IGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEEC 589
Query: 301 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP
Sbjct: 590 GVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFY 646
Query: 360 VQP 362
+ P
Sbjct: 647 ICP 649
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 132/187 (70%), Gaps = 6/187 (3%)
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
F GQP+RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+R RQQ ++ SSVISS
Sbjct: 114 FLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISS 173
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFE 296
SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE
Sbjct: 174 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFE 233
Query: 297 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP +
Sbjct: 234 TEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--- 290
Query: 356 TPNLVQP 362
TP + P
Sbjct: 291 TPFYICP 297
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1347 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVYVDHEND 1405
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1406 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1436
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLP 98
+ N+ L A+ ET+EVYAQ+TL P
Sbjct: 79 LQNVTLNADPETEEVYAQMTLQP 101
>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
Length = 671
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 218/691 (31%), Positives = 306/691 (44%), Gaps = 86/691 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E + S + F++P+ I C+V
Sbjct: 8 LDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVD------FGHFQIPALIPCKVS 61
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS---------PRPKVHSFSKVLT 128
I MAE ETDEVYA+I L P S ++ D C DS + K SF+K LT
Sbjct: 62 AIKYMAEPETDEVYAKIRLTPS-SNSDLMFGDGCGEDSDDRLPNGIESQEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPSSVISSQSMHL 243
TTGWS FV K+LVAGD+ VFLR ENG+L VG+R R + S + S L
Sbjct: 181 TTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGWNSFGGYSGFL 240
Query: 244 -----------------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 278
V+ AS A Q VVYY PR S +F + +
Sbjct: 241 REDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYY-PRASTPEFCVRASAVR 299
Query: 279 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 336
A++ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 300 TAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPWRLLQVAWDEPDL 359
Query: 337 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-PLDLPSAASAPWSARLAQ 395
+ RVSPW +A N+ L+ PR + +P P D P P +
Sbjct: 360 LQNVKRVSPW-----LAELVSNMPAIHLSPFSPPRKKLRLPQPPDFPLLGQIPMPSFTGI 414
Query: 396 SHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD--------GEWLTSPRVK 447
D H + SS+ ++ QS + SP +
Sbjct: 415 PLRSNSPLCCVSDNIPAGIQGARHAQFELSSSDLHFNKLQSGLFPVDFQRRDHAASPS-R 473
Query: 448 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIE 507
S F ++NIS S +L E ET KT LFG
Sbjct: 474 ISSGNFMGNTKKSENISCLLTMGNSS---------QSLKESSET--KTPHFV---LFGQL 519
Query: 508 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 567
++ SS ++ +++G++ A SDG ++ + + S
Sbjct: 520 IVTDQQSSQSCSGDTNANSSSDGNL-----GKASSDGSGSALQQNGPMENSSDERSTWYK 574
Query: 568 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEI 627
+++ L KV ++ +GR LDL+ L Y+ L +L MF I+ + +
Sbjct: 575 DHQKTDLGLETDHCKVFLESEDIGRTLDLSVLGSYEELHRKLASMFGIES---SEMLSNV 631
Query: 628 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
+Y D G GD+P+ EF +R+ I S
Sbjct: 632 LYRDAAGATKHAGDEPFSEFLKTARRLTILS 662
>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 711
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 233/706 (33%), Positives = 320/706 (45%), Gaps = 106/706 (15%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E A TN + R+P+ +LCRV
Sbjct: 8 LDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAAAP---RIPALVLCRVA 62
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-----PCPADSPRPKVHSFSKVLTASDT 132
+ MA+ ETDEVYA+I L+P + NE D +++P K SF+K LT SD
Sbjct: 63 AVKFMADPETDEVYAKIRLVPI-ANNELDCEDDGVMGSSGSEAPE-KPASFAKTLTQSDA 120
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 121 NNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGW 180
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS--------------- 237
STFV K+LVAGD+ VFLR ENG+L VG+R R + P S
Sbjct: 181 STFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFPKFLR 240
Query: 238 ---SQSMHLG-----------------------VLATASHAVATQTMFVVYYKPRTS--Q 269
S+ M G V+ A+ A Q VVYY PR S +
Sbjct: 241 EDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYY-PRASTPE 299
Query: 270 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 327
F + + AV ++ GMR+KM FE EDS F GT+ V+ P W +S WR L
Sbjct: 300 FCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLL 359
Query: 328 KVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLDLP 382
+V WDEP + RVSPW +E + S P + L+ PR + +P P D
Sbjct: 360 QVTWDEPDLLQNVKRVSPWLVE--LVSNMPII---HLSPFSPPRKKLRIPQHPDFPFDGQ 414
Query: 383 SAASAPWSARLAQSHNLTQL-SVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 441
S+ S L S L L T + H + SD N+ S G +
Sbjct: 415 FPMSSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQS-----GLFP 469
Query: 442 TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT------ 495
TS FQ D + I+ +G T H + NN+++ + G +
Sbjct: 470 TS---------FQR-FDQHSRIT-----NGIITAH--RKNNESISCLLTMGNSSQNLEKS 512
Query: 496 --ETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD--SDGKSDIAKE 551
E LFG ++ S VS + T S A SDG ++
Sbjct: 513 ANEKTPQFLLFGQPILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAKKISDGLGSTLEQ 572
Query: 552 FKEKKQEQVQVSPKESQSKQSC-LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 610
K K + V Q Q+ + + KV M+ VGR+LDL+ L Y+ L L
Sbjct: 573 -KGKPENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLA 631
Query: 611 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
MF I+ + T ++Y D G + GD+P+ +F KR+ I
Sbjct: 632 NMFGIE---RSETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTI 674
>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 701
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 229/725 (31%), Positives = 317/725 (43%), Gaps = 115/725 (15%)
Query: 5 LGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIP 64
LGS + L +LW ACAG +V +P +V+YFPQGH E AS + RIP
Sbjct: 5 LGSKEKSKEAGKCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIP 64
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSF 123
+ I CRV + MA+ E+DEVYA+ITL+P S+++ + K SF
Sbjct: 65 AY-----IPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASF 119
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG P
Sbjct: 120 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTP 179
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS------VIS 237
RRHLLTTGWSTFV K+L+AGD+ VFLR ENG+L VG+R R P S
Sbjct: 180 RRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGC 239
Query: 238 SQSMHLG--------------------------------------VLATASHAVATQTMF 259
+ M G V+ AV Q
Sbjct: 240 NYVMPYGGFSAFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVNGQPFE 299
Query: 260 VVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFS 316
V+YY PR S +F + + A ++ GMR+KM FE EDS F GT+ V+
Sbjct: 300 VIYY-PRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVAD 358
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 375
P W DS WR L+V WDEP + RVSPW +E + S P++ L PR +
Sbjct: 359 PVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPSI---HLTHFSPPRKKLR 413
Query: 376 VP-----PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 430
P PLD + S + S+ LS DN A
Sbjct: 414 FPQYPDFPLDAQFSMPTFSSNLVGPSNPFGCLS--------DNIPAGMQG---------- 455
Query: 431 MSRTQSDGEWLTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGH--STPHPSKPNNDTLL- 486
+R G L+ P KF LF + + P S S S N +LL
Sbjct: 456 -ARHAQYGLSLSDPHHNKFQSGLFPAPFPQLDHPATPPKASNDYVSRKRSSSENVSSLLT 514
Query: 487 --EQVETGRKTET-GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD 543
+ ET +K++ T LFG ++ S VS + I+ + S+
Sbjct: 515 IAQSTETSKKSDDRKTGFTLFGRSILTEQQMSQSCSGDTVSPV---------ITGNSSSE 565
Query: 544 GKSDIAKEFKEKKQEQVQVS--PKES--QSKQSCLTSNR--------SRTKVQMQGVAVG 591
G D F + + P+ S + Q+ ++R KV M+ VG
Sbjct: 566 GNQDKMANFSDGSGSALHQHGLPEHSSCEGYQTYKVNHRETEPNLETGHCKVFMESEDVG 625
Query: 592 RALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 651
R LDL+ L YD L +L +MF I+ + + ++Y D G + +GD+P+ +F
Sbjct: 626 RTLDLSLLTSYDELCGKLAKMFTIE---DSEMRNHVLYRDATGAVKHIGDEPFSDFTKTA 682
Query: 652 KRIFI 656
KR+ I
Sbjct: 683 KRLTI 687
>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
Length = 497
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 163/353 (46%), Positives = 217/353 (61%), Gaps = 62/353 (17%)
Query: 329 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 388
V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+ AS
Sbjct: 181 VHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNL 238
Query: 389 WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKF 448
WS+ L Q H Q +T++ W +SP
Sbjct: 239 WSSVLTQPHEFAQSCITSQ--------------------------------W-SSP---- 261
Query: 449 SQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGI 506
QQ ++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI
Sbjct: 262 -QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGI 317
Query: 507 ELINHATS-----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQ 561
+L++ + + +AP + +S T + H SD KS+I+K +EKKQE +
Sbjct: 318 DLMSSSLAVPEEKTAPMRPINISKPTMDSH----------SDPKSEISKVSEEKKQEPAE 367
Query: 562 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 621
SPKE QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +
Sbjct: 368 GSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS 425
Query: 622 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M
Sbjct: 426 RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRML 478
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/154 (69%), Positives = 120/154 (77%), Gaps = 11/154 (7%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-EL 59
MANR G LY ELWK CAGPLVDVP+ +RVYYFPQGHMEQLEAST Q +L
Sbjct: 36 MANRGGEY---------LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDL 86
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRP 118
N PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RP
Sbjct: 87 NTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRP 146
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL 152
KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL
Sbjct: 147 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL 180
>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 214/702 (30%), Positives = 314/702 (44%), Gaps = 99/702 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E N ++P F + CRV +
Sbjct: 21 QLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPVNFRTCPKVPPF-----VPCRVTAVK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
A+ ETDEVYA++ L+P + + D + K SF+K LT SD + GGFSV
Sbjct: 76 YRADPETDEVYAKLKLIPLNANDVDYDRDVVGGAETQDKPASFAKTLTQSDANNGGGFSV 135
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 136 PRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 195
Query: 201 LVAGDTFVFLRGENGELHVGVR------CLARQQSS------------------------ 230
LVAGD+ VFLR ENG+L VG+R C + SS
Sbjct: 196 LVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCHIPYGGFSPFFREDD 255
Query: 231 ------------MPS-SVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLN 275
PS S++ + ++ AS+ A + F V Y PR S +F + +
Sbjct: 256 NRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVYYPRASTPEFCVKAS 315
Query: 276 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 333
A+ ++ G+R+KM FE EDS F GT+ + P +W +S WR L+V WDE
Sbjct: 316 LVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVADPLNWPNSPWRLLQVTWDE 375
Query: 334 PASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPPLDLPSAASAPWS-- 390
P + RVSPW +E + S P + P K+ RL + D P P S
Sbjct: 376 PDLLQNVRRVSPWLVE--LVSNMPAIHFSPFSPPRKKLRLPQQP---DFPLDGQIPLSTF 430
Query: 391 -ARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFS 449
+ L N Q E A H H S + +S+ QS
Sbjct: 431 PSNLLGPSNTNQFGCLLESTPAGMQGA-RHAHYGLSLSDLHLSKLQSG------------ 477
Query: 450 QQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND-------TLLEQVETGRKTETGT--S 500
LF + + +A P +S KPN T+ ++ +K + G S
Sbjct: 478 --LFSTGF-PSLDHAATPMRVSNSITL-QKPNLSENVSCLLTMANSTQSSKKLDVGKTPS 533
Query: 501 CRLFGIELINHATSSAPSEKVPVSSLTT-----EGHIISTISAAADSDGKSDIAKEFKEK 555
LFG +++ S S +S + T +G+ + ++ +D G + + +E
Sbjct: 534 LVLFGQKILTEQQISPSSSGDTLSPVLTRNCSSDGN-VDKVTNFSDGSGSALHQEGLREH 592
Query: 556 KQ-EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 614
E+ Q Q ++ L KV M+ VGR +DL+ L YD L +L +MF
Sbjct: 593 SSCERFQWCKDNHQETEAGL--EIGHCKVFMESEDVGRTMDLSLLRSYDELHRKLADMFG 650
Query: 615 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
I+ + ++Y D G + + D+ + +F KR+ I
Sbjct: 651 IE---KSEMLSHVLYRDSTGAVKRISDESFSDFTRTAKRLTI 689
>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 215/691 (31%), Positives = 306/691 (44%), Gaps = 88/691 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E + S F++P+ I C+V
Sbjct: 8 LDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSV------EFGHFQIPALIPCKVS 61
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS---------PRPKVHSFSKVLT 128
I MA+ ETDEVYA+I L+P + ++ C D+ + K SF+K LT
Sbjct: 62 AIKYMADPETDEVYAKIRLIPL-NNSDLMLGHGCGEDNDDRLHSGNESQEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISSQSMHLG--- 244
TTGWS FV K+LVAGD+ VFLR ENG+L VG+R R + SS +S + + G
Sbjct: 181 TTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSGFFR 240
Query: 245 -----------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 279
V+ AS A Q VYY PR S +F + +
Sbjct: 241 EDESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYY-PRASTPEFCVKASAVRS 299
Query: 280 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 337
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 300 AIQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLL 359
Query: 338 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-PLDLPSAASAPWSARLAQS 396
RVSPW +E N+ L+ PR + +P P D P P +
Sbjct: 360 HNVKRVSPWLVE-----LVSNMPAIHLSPFSPPRKKLRLPQPPDFPLLGQIPMPSFTGNP 414
Query: 397 HNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-----DGEWL--TSPRVKFS 449
D H SS+ ++ Q+ D + L +P + S
Sbjct: 415 LRSNSPLCCVSDNIPAGIQGARHAQFGLSSSDLHFNKLQAGLFPVDFQRLDRAAPPSRIS 474
Query: 450 QQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELI 509
F ++++IS S Q G T+T LFG ++
Sbjct: 475 NSNFVGNTQNSESISCLLTMGNSS--------------QGMKGSDTKT-PHILLFGQLIV 519
Query: 510 NHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP--KES 567
SS ++ +++GH A SDG +++ + P K+
Sbjct: 520 TDQQSSQSCSGDTNANSSSDGH-----PGKAISDGSGSASQQNGPLENSSGGRCPWYKDY 574
Query: 568 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEI 627
Q L + KV M+ VGR LDL+ L Y+ L +L MF I+ + +
Sbjct: 575 QKTDPGLET--GHCKVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGIE---SSEMLSNV 629
Query: 628 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
+Y + G GD+P+ EF +R+ I S
Sbjct: 630 LYRNAAGATKHAGDEPFSEFLKTARRLTILS 660
>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
Length = 188
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 141/167 (84%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV+VP++ +RVYYFPQGHMEQLEAS +Q L+Q++P F LPSKILC
Sbjct: 16 NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTST
Sbjct: 76 KVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
HGGFSVLR+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRG
Sbjct: 136 HGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182
>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 688
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 223/713 (31%), Positives = 310/713 (43%), Gaps = 123/713 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L LW ACAG +V +P +V+YFPQGH E + + +IP F I C+V
Sbjct: 14 LDSRLWHACAGGMVQMPVVNAKVFYFPQGHAEHACGPVDFRVYPKIPPF-----IQCKVG 68
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC----PADSPRPKVHSFSKVLTASDTS 133
I MA+ ETDEVY ++ L+P ++NE D + K SF+K LT SD +
Sbjct: 69 AIKYMADPETDEVYVKLRLVPL-TRNEGDFEDDAVGGINGSENKDKSPSFAKTLTQSDAN 127
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 128 NGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 187
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS------------------SMPSSV 235
+FV K+LVAGD+ VFLR E +L VG+R R MP
Sbjct: 188 SFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNSGGGIRPMPYGG 247
Query: 236 IS-------SQSMHLG-------------VLATASHAVATQTMFVVYYKPRTS--QFIIS 273
S SQ + G V+ A+ A Q VVYY PR S +F +
Sbjct: 248 FSAFLREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQPFEVVYY-PRASAPEFCVK 306
Query: 274 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWD 332
N A+ ++ GMR+KM FE EDS F GT+ V P W +S WR L+V WD
Sbjct: 307 ANLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADPRWPNSPWRLLQVTWD 366
Query: 333 EPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPPLDLPSAASAPW-- 389
EP + RVSPW +E + S P + + + K+PR P S P
Sbjct: 367 EPELLQNVKRVSPWLVE--IVSNMPTIHLSHYSTQQKKPRFPQH-PDFSFDGQISLPAFP 423
Query: 390 SARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFS 449
S L S+ L AE A H + SN +F K
Sbjct: 424 SNFLGPSNPFGCL---AESTPAGIQGARHANYGISLSNLHFN---------------KLQ 465
Query: 450 QQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELI 509
LFQ P S NN +++V TG SC L+
Sbjct: 466 SGLFQAGFP--------PLDHTASPVLRVSSNNAATMQKVGTGDN----VSC------LL 507
Query: 510 NHATSSAPSEKVP----------VSSLTTEGHIISTISAAADS------DGKSDIAKEFK 553
+ +T++ PS+KV ++ TE I SA D DG +D +F
Sbjct: 508 SMSTATQPSKKVDDVKAPQLVLFGQTILTEQQISLNTSAKTDPTRNNSFDGNADKMCKFS 567
Query: 554 E--------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 605
+ + ++ + Q K++ + KV M+ +GR +DLT L YD L
Sbjct: 568 DGFGYALHPQGSSLERLQWYKDQQKETMASLETGHCKVFMESEDIGRTMDLTMLGSYDEL 627
Query: 606 IDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW--HEFCNMVKRIFI 656
+L +MF I+ + ++Y D G + +GD+ + EF +R+ I
Sbjct: 628 YRKLADMFGIEKSVVLS---HMLYRDTTGAVKHIGDEAFSCSEFTKTARRLTI 677
>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
gi|238014578|gb|ACR38324.1| unknown [Zea mays]
gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 340
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 189/321 (58%), Gaps = 22/321 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ LP ++CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEV A++ L+ E + A+ +H F K LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 250 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
+ ++ +++F + Y PR S++II K+L+++N+ +G R + ED ERR SG
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SG 313
Query: 308 TVVGVEDFSP-HWKDSKWRSL 327
VV + + P W SKWRSL
Sbjct: 314 VVVRISEIDPMKWPGSKWRSL 334
>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
Length = 1031
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/299 (48%), Positives = 192/299 (64%), Gaps = 12/299 (4%)
Query: 83 AEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGGF
Sbjct: 3 ADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGF 62
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 63 SVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 122
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 123 KRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ 182
Query: 259 FVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 183 FTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDL 242
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 372
P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPRL
Sbjct: 243 DPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 298
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 635
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 913 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 971
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 972 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1001
>gi|62321072|dbj|BAD94156.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 313
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 214/349 (61%), Gaps = 62/349 (17%)
Query: 333 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR 392
EPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+ AS WS+
Sbjct: 1 EPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSV 58
Query: 393 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQL 452
L Q H Q +T++ W +SP QQ
Sbjct: 59 LTQPHEFAQSCITSQ--------------------------------W-SSP-----QQC 80
Query: 453 FQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELIN 510
++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI+L++
Sbjct: 81 HRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMS 137
Query: 511 HATS-----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 565
+ + +AP + +S T + H SD KS+I+K +EKKQE + SPK
Sbjct: 138 SSLAVPEEKTAPMRPINISKPTMDSH----------SDPKSEISKVSEEKKQEPAEGSPK 187
Query: 566 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKW 625
E QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +R +W
Sbjct: 188 EVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQW 245
Query: 626 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
EIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M
Sbjct: 246 EIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRML 294
>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
Length = 816
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFS 139
+ A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTHGGFS
Sbjct: 1 MHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFS 60
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 61 VPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 120
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RLVAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT + F
Sbjct: 121 RLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRF 180
Query: 260 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
+++ PR S+F+I L KY++AV + + +VGMR++M FE E+ + + +
Sbjct: 181 TIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETENQVFVATWAQSLALVTWI 240
Query: 317 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
P W++S WRS+KV WDE + R +VS WEIEP + P P + KRP
Sbjct: 241 PVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPL--TTFPMYPSPFPLRLKRP 293
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 682 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 740
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 741 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 771
>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
Length = 705
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 225/717 (31%), Positives = 310/717 (43%), Gaps = 122/717 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR---LPSKILCRVV 77
+LW ACAG +V +P RVYYFPQGH E + + LP+ +LC V
Sbjct: 32 QLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAATVGPRLLPALVLCSVA 91
Query: 78 NIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ +A+ ETDEV+A+I L+P E + EP P A++ + K+ SF+K LT SD +
Sbjct: 92 GVRFLADPETDEVFAKIRLVPVGPDEVAFREPEGLGPLEAEA-QEKLASFAKTLTQSDAN 150
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 151 NGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWS 210
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV------------------ 235
TFV K+LVAGD+ VFLR E+GEL VG+R R V
Sbjct: 211 TFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGWNAPGYGGFSAFLKDE 270
Query: 236 ----ISSQSMHL---------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEA 280
++S +L V+ AS A Q VVYY PR S +F++ A
Sbjct: 271 ENKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYY-PRASTPEFVVKAASMQAA 329
Query: 281 VNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 338
+ + GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 330 MRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVSWDEPDLLQ 389
Query: 339 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS-H 397
VSPW +E V+S P + P K+ L +P P+ L
Sbjct: 390 NVKCVSPWLVE-LVSSIPPIHLGPFSPPRKK---------LRVPQHPDFPFDGHLFNPIF 439
Query: 398 NLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRV-KFSQQLFQEA 456
+ L + R + D S +R G LT ++ K LFQ
Sbjct: 440 HGNPLGPSNSSLRC---------YPDNSPAGIQGARHAQFGLPLTDHQLNKLHLGLFQGG 490
Query: 457 -------------IDDNKNISAWPAHSGHS------TPHPSKPNNDTLLEQVETGRKTET 497
I IS+ PAH S TP ++ ++D RKT
Sbjct: 491 GFNRLDALTPSSRIPKGCMISSAPAHDSVSCLLTIGTPQSTEKSDD---------RKT-- 539
Query: 498 GTSCRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK-SDIAKEFKE 554
LFG ++ TSS + + + + A SDG S I F
Sbjct: 540 -PHIMLFGKAILTEQQMTSSGSRDTLSSGATANSSPYGNAPKAGNTSDGSGSSICIGFSS 598
Query: 555 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 614
+ E + K V M+ VGR +DL+ V Y+ L L +MF
Sbjct: 599 QGHESSDFGLEAGHCK------------VFMESEDVGRTIDLSDFVSYEELYGRLADMFG 646
Query: 615 IKGQLHTRTKWEIV----YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
I+ K EI+ Y D G +M G+ P+ +F + +R+ I S + P
Sbjct: 647 IE-------KEEIISHLRYRDTAGTVMHTGELPFSDFMKVARRLTIISGDSGRLPKP 696
>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 162/408 (39%), Positives = 211/408 (51%), Gaps = 60/408 (14%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK 71
S L +LW ACAG +V +P G +V YFPQGH EQ AST + +P +P
Sbjct: 21 GSEVGGLDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQ-AASTPEFPRTLVPNGSVP-- 77
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
CRVV+++ +A+ ETDEV+A+I L PE + D A P K SF+K LT SD
Sbjct: 78 --CRVVSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSD 135
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFS+ R A PPLD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 136 ANNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTG 195
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG------- 244
WSTFV K+LVAGD VFLR +GEL VGVR R S+ SS S +G
Sbjct: 196 WSTFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYALN 255
Query: 245 ---------------------------VLATASHAVATQTMFVVYY-KPRTSQFIISLNK 276
VL A+ AV+ + VVYY + T++F +
Sbjct: 256 SSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSGERFEVVYYPRASTAEFCVKAGL 315
Query: 277 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 334
A+ + GMR+KM FE EDS F GT+ V+ P W S WR L+V WDEP
Sbjct: 316 VKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVTWDEP 375
Query: 335 ASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 382
+ +RVSPW++E VA+ L M++PP+ LP
Sbjct: 376 DLLQGVNRVSPWQLE-LVAT-----------------LPMQLPPVSLP 405
>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
Length = 702
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 222/718 (30%), Positives = 310/718 (43%), Gaps = 129/718 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + + P R+P+ ILCRV I
Sbjct: 21 QLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVDF---RNCP--RVPAHILCRVAAIK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQ------------NEPTTPDPCPADSPRPKVHSFSKVLT 128
MA+ TDEVYA+I L+P N TPD K SF+K LT
Sbjct: 76 FMADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPD---------KPASFAKTLT 126
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 127 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 186
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ----------------QSSMP 232
TTG STFV K+LV+GD+ VFLR ENG+L VG+R R ++P
Sbjct: 187 TTGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTVP 246
Query: 233 SSVIS--------------------SQSMHLG--------VLATASHAVATQTMFVVYYK 264
S S +G V A+ A Q VVYY
Sbjct: 247 YGGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVYY- 305
Query: 265 PRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWK 320
PR S +F + + A+ ++ GMR+KM FE EDS F GT+ V+ P W
Sbjct: 306 PRASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVAEPLRWP 365
Query: 321 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL- 379
+S WR L+V WDEP + RVSPW +E + S P + L PR M +P
Sbjct: 366 ESPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLTPFSPPRKKMRLPQHP 420
Query: 380 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 439
D P P + DK H H S + +++ +
Sbjct: 421 DFPFEGQLPMPTFSGNLLGPSSPFGCLPDKTPAGMQGARHAHYGLSLSDMHLNKLHTGLF 480
Query: 440 WLTSPRV-------KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 492
P + KFS + ++N+S S HST KP++ + +
Sbjct: 481 PAGFPPLDHAAAPSKFSNNTMIQKPTMSENLSCLLTMS-HSTQTSKKPDDVKPPQLI--- 536
Query: 493 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKE 551
LFG ++ SL++ G +S ++ + SDG +D
Sbjct: 537 ----------LFGQPILTEQQ----------ISLSSSGDTVSPVLTGNSSSDGNADKMAN 576
Query: 552 FKEKKQEQVQVSPKESQSKQSC--LTSNRSRT---------KVQMQGVAVGRALDLTTLV 600
+ +Q S +E S + NR T KV M+ VGR LDL+ L
Sbjct: 577 HSDNSGSALQQSIQERSSCEGFQWYKDNRHETEPHLETGHCKVFMESEDVGRTLDLSLLG 636
Query: 601 GYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW--HEFCNMVKRIFI 656
YD L +L +MF I ++ T ++Y D G + VGD+P+ +F +R+ I
Sbjct: 637 SYDELYRKLADMFGID---NSETLNHVLYRDGTGAVKHVGDEPFSCSDFMKTARRLTI 691
>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 670
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 213/693 (30%), Positives = 310/693 (44%), Gaps = 101/693 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + +P+ P +LCRV+ I
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLPI---PPMVLCRVLAIK 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
MA+ E+DEV+A++ L+P E +E D +S K SF+K LT SD +
Sbjct: 73 YMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNG 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 133 GGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNF 192
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------------------- 226
V K+LVAGD+ VF+R ENG+L VG+R R
Sbjct: 193 VNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLRED 252
Query: 227 QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEA 280
+ +S+ S S + V+ A+ A++ + VVYY + TS+F + A
Sbjct: 253 ESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDARAA 312
Query: 281 VNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 338
+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP +
Sbjct: 313 MRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQ 372
Query: 339 RPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP----------PLDLPSAASA 387
RV+PW +E V++ V P+ L PR M +P + +PS S
Sbjct: 373 NVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSN 426
Query: 388 PWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVK 447
P S L + V + R + H + SD + +++R P
Sbjct: 427 PLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPP----PPPPSSL 480
Query: 448 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIE 507
D KN + + +TP NDT ++ + LFG
Sbjct: 481 QLSPSLGLRNIDTKNEKGFCFLTMGTTPC-----NDTKSKK----------SHIVLFGKL 525
Query: 508 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 567
++ P E++ T +I T ++ S+ +EF + SP S
Sbjct: 526 IL-------PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEG----SPC-S 573
Query: 568 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEI 627
+ KV M+ VGR LDL+ L Y+ L +L +MF IK + +
Sbjct: 574 KKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSV 630
Query: 628 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
+Y D G + G++P+ EF +R+ I + Q
Sbjct: 631 LYRDASGAIKYAGNEPFSEFLKTARRLTILTEQ 663
>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
Length = 683
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 213/713 (29%), Positives = 301/713 (42%), Gaps = 128/713 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV YFPQGH E A N + R+P +LCRV +
Sbjct: 18 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNP----RIPPLVLCRVSAVK 71
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA----DSPRPKVHSFSKVLTASDTSTHG 136
+A+ E+DEVYA+I L+P + T D ++P K SF+K LT SD + G
Sbjct: 72 YLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPE-KPASFAKTLTQSDANNGG 130
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q ++AKD+HG WRF+HI+RG PRRHLLTTGWS FV
Sbjct: 131 GFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTTGWSNFV 190
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSMPSSVISSQSMHLGV----- 245
K LVAGD+ VFLR ENG+L VG+R C S + + S + G
Sbjct: 191 NKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRGYSGFLR 250
Query: 246 -------------------------LATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 278
+A A+ A FV+ Y PR S +F + +
Sbjct: 251 EDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVR 310
Query: 279 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 336
A+ ++ GM++KM FE +DS F G + V P W +S WR L+V WDEP
Sbjct: 311 AAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDL 370
Query: 337 ITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSM--------EVPPLDLPSAASA 387
+ RV+PW +E + S P++ + P K+ RL ++P S A
Sbjct: 371 LQNVKRVNPWLVE--LVSHVPSIHLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNALR 428
Query: 388 PWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVK 447
P S S N+ A H + SD N K
Sbjct: 429 PSSPLCCISDNIPAGIQGAR------HAQFGLSSSDLHFN-------------------K 463
Query: 448 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR----- 502
LF + + +A P+ + NN+ + + G T+
Sbjct: 464 LQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAP 523
Query: 503 ---LFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
LFG I + + S + +SS SDG + F +
Sbjct: 524 YFFLFGQPILIEQQVSQSCSGDTAGISS----------------SDGNPEKTPNFSDGSG 567
Query: 558 EQV-QVSPKESQSKQSCLTSNR-----------SRTKVQMQGVAVGRALDLTTLVGYDHL 605
Q P+ES S + LT + KV M+ VGR LDL+ L Y+ L
Sbjct: 568 SAFHQNGPQESSSDEGLLTWYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEEL 627
Query: 606 IDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
+L MF I+ ++Y D+ G + +GD P+ EF +R+ I +
Sbjct: 628 YRKLANMFGIE---RAEMLSNVLYRDEAGIVKHIGDAPFGEFLKTARRLTILA 677
>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
Length = 689
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 213/702 (30%), Positives = 311/702 (44%), Gaps = 90/702 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E A +L LP +LC V +
Sbjct: 14 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHAGGAADLAAG--ARPLPPLVLCAVTGVR 71
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTA 129
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT
Sbjct: 72 FLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADA-REKLSSFAKTLTQ 130
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLT 190
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA-- 247
TGWSTFV K+LVAGD+ VFLR E+GEL VG+R R + + G L+
Sbjct: 191 TGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSGWNAPGYGALSAF 250
Query: 248 -----------------------------TASHAVATQTMFVVYYKPRTS--QFIISLNK 276
AS A + Q VVYY PR S +F++
Sbjct: 251 LKDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYY-PRASTPEFVVKAAS 309
Query: 277 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 334
A+ N++ GMR+KM FE EDS F GT+ + P W +S WR L+V WDEP
Sbjct: 310 VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVTWDEP 369
Query: 335 ASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLA 394
+ V+PW +E V+S P + P K+ L +P P+ +L
Sbjct: 370 DLLQNVKCVNPWLVE-IVSSIPPIHLGPFSPPRKK---------LRMPQHPDFPFDGQL- 418
Query: 395 QSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRV-KFSQQLF 453
L+ + + SD + +R G LT ++ K LF
Sbjct: 419 -------LNPIFHGNPLGPSNSALRCFSDIAPAGIQGARHAQFGLPLTDHQLSKLHLGLF 471
Query: 454 QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL--LEQVETGRKTETGTSCR-----LFGI 506
Q + + P+H S P N+++ L + T + TE + LFG
Sbjct: 472 QGGGFNRFDAITPPSHISKGFVISSAPVNESVSCLLTIGTPQATEKSDDRKKPHIMLFGK 531
Query: 507 ELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKE 566
++ ++ + S ++ + SDG + + +
Sbjct: 532 PILTEQQMNSRGSRETFS---------PEVTGNSSSDGNVQKTGNVSDGSGSSICIGFSS 582
Query: 567 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKW 625
+ S L KV M+ VGR +DL+ Y+ L +L +MF I K ++ +
Sbjct: 583 QGHEASELGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIEKAEIMS---- 638
Query: 626 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ Y D G + G++P+ +F + +R+ I S + + P
Sbjct: 639 HLCYRDAAGAVKHTGEEPFSDFMKVARRLTIIESTEGRLQKP 680
>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 194/355 (54%), Gaps = 12/355 (3%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
M LGS + L +LW ACAG +V +P +V+YFPQGH E AS +
Sbjct: 1 MIPFLGSKEKSKEAGKCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNY 60
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPK 119
RIP + I CRV + MA+ E+DEVYA+ITL+P S+++ + K
Sbjct: 61 PRIPAY-----IPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEK 115
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+
Sbjct: 116 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIY 175
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RG PRRHLLTTGWSTFV K+L+AGD+ VFLR ENG+L VG+R R S
Sbjct: 176 RGTPRRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSFFGRV 235
Query: 240 SMHL-GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFE 296
+ V+ AV Q V+YY PR S +F + + A ++ GMR+KM FE
Sbjct: 236 KVTAEAVIEAVRLAVNGQPFEVIYY-PRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFE 294
Query: 297 GEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
EDS F GT+ V+ P W DS WR L+V WDEP + RVSPW +E
Sbjct: 295 TEDSSRISWFMGTISSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE 349
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ L YD L +L +MF I+ + + ++Y D G + +GD
Sbjct: 495 KVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRNHVLYRDATGAVKHIGD 551
Query: 642 DPWHEFCNMVKRIFI 656
+P+ +F KR+ I
Sbjct: 552 EPFSDFTKTAKRLTI 566
>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
Length = 709
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 218/725 (30%), Positives = 310/725 (42%), Gaps = 124/725 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + +P R+P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVHSKVYYFPQGHAEHAQGPVVD-----LPAGRVPALVLCRVAAVR 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEP---------TTPDPCPADSPRPKVHSFSKVLTASD 131
MA+ +TDEV+A+I L P NEP + K SF+K LT SD
Sbjct: 78 FMADPDTDEVFAKIRLAPV-RPNEPGYAADADDAIGAAAAGGGAQEDKPASFAKTLTQSD 136
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 137 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTG 196
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP------------------- 232
WSTFV K+LVAGD+ VF+R ENG+L VG+R + P
Sbjct: 197 WSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLHHHQPPPPPGGGGYAG 256
Query: 233 ------------SSVISSQSMHLG-----------VLATASHAVATQTMFVVYYKPRTS- 268
S ++++ + G V+ A+ AV+ Q VVYY PR S
Sbjct: 257 FSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANLAVSGQPFEVVYY-PRAST 315
Query: 269 -QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 325
+F + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR
Sbjct: 316 PEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWR 375
Query: 326 SLKVQWDEPASITRPDRVSPWEIE-----PFVASATPNLVQP--VLAKNKRPRLSMEVPP 378
L+V WDEP + RVSPW +E P + TP P L P L +E
Sbjct: 376 LLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPFSPPPRKKLCVPLYPELPLEGHQ 435
Query: 379 LDLPSAASAPWSARLA-------------QSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 425
P +P + Q Q ++ D +D + H
Sbjct: 436 FPAPMFHGSPLGRGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLDKLQSSLSPHG--- 492
Query: 426 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 485
+ Q DG + PR+ + A + +IS +TP KP++D
Sbjct: 493 -----LHHHQLDGHGV-QPRIAAGLIIGHPAAARD-DISCLLTIG--TTPQNRKPSSD-- 541
Query: 486 LEQVETGRKTETGTSCRLFG--------IELINHATSSAPSEKVPVSSLTTEGHIISTIS 537
+ LFG I L N A AP +K P + T+S
Sbjct: 542 -----VKKAAAAAPQLMLFGKPILTEQQISLGNVAGFPAP-KKSPSDDVAER-----TVS 590
Query: 538 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 597
+SD S + + S ++++ L + + +Q + V GR LDL+
Sbjct: 591 ---NSDVSSPGSNHGGSSRSSGGAPSCQDNKVPDLGLETGHCKVFMQSEDV--GRTLDLS 645
Query: 598 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDD-EGDMMLVGDDPWHEFCNMVKRIFI 656
+ Y+ L L +MF I T + Y DD G + GD P+ EF +R+ I
Sbjct: 646 AVGSYEELYQRLADMFGID---KTELMSHVFYRDDASGALKHTGDKPFSEFTKTARRLTI 702
Query: 657 CSSQD 661
+ +
Sbjct: 703 LTDAE 707
>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 537
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 179/268 (66%), Gaps = 11/268 (4%)
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
+H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+
Sbjct: 8 LHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIY 67
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S
Sbjct: 68 RGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSN 127
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
S + L+ ++++ +++F + Y PR S+FII K+L+++N F +GMR+K+++
Sbjct: 128 SSKIHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLNRPFCIGMRFKIQYGS 187
Query: 298 EDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 356
ED ERR SG + G+ D P W SKW+SL V+W++ +R+SPWEIE + +
Sbjct: 188 EDVNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIE--IVGGS 244
Query: 357 PNLVQPVLAKNKR-----PRLSMEVPPL 379
++ Q + A + + P+ +++VP L
Sbjct: 245 VSIAQSLSASSSKRTKLCPQGNVDVPTL 272
>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
gi|223942161|gb|ACN25164.1| unknown [Zea mays]
gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
Length = 681
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 205/391 (52%), Gaps = 45/391 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E +L LPS +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR---ALPSLVLCSVTGVR 69
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPC---PADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT SD + G
Sbjct: 70 FLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADA-REKLSSFAKTLTQSDANNGG 128
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 129 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 188
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA--------- 247
K+LVAGD+ VFLR E+GEL VG+R + R + + G L+
Sbjct: 189 NQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFLKDEEGK 248
Query: 248 ----------------------TASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 283
AS A + Q VVYY PR S +F++ A+ N
Sbjct: 249 MMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRN 307
Query: 284 KFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 341
++ GMR+KM FE EDS F GT+ + P W +S WR L+V WDEP +
Sbjct: 308 QWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVAWDEPDLLQNVK 367
Query: 342 RVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
V+PW +E V+S P + P K+ R+
Sbjct: 368 CVNPWLVE-IVSSIPPIHLGPFSPPRKKLRV 397
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
KV ++ VGR +DL+ Y+ L +L +MF I+ + Y D G + G
Sbjct: 592 CKVFVESEDVGRTIDLSVFGSYEELYGQLADMFGIE---KAEVMSHLCYRDAAGAVKRTG 648
Query: 641 DDPWHEFCNMVKRIFICSSQDVKKMSP 667
D+P+ +F + +R+ I S + + P
Sbjct: 649 DEPFCDFMKVARRLTIVESTEGRLQKP 675
>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 250/467 (53%), Gaps = 60/467 (12%)
Query: 243 LGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
GVLA+ASHA+ T ++FVVYY+PR SQ+I+S+NKY A F VGMR++M FE ED
Sbjct: 1 FGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDV 60
Query: 301 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR-PDRVSPWEIEPFVAS--ATP 357
P ++F GT+VG DFSP W S+W+SLKVQWD+ +I P+RVSPWEI+ S A
Sbjct: 61 PVKKFFGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAIS 120
Query: 358 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRIDN-- 413
L+Q AKNKRPR + E ++LPS W + + Q H T + +++ RI
Sbjct: 121 TLLQSS-AKNKRPRETNE--NMNLPSQEPTQEFWLSGVTQQHERTYVG-SSDPNRISGSG 176
Query: 414 --HVAWHHKHSDFSS-NSNFMSRTQ---SDGEWL---------TSPRV-KFSQQLFQEAI 457
+ W +H+ + + +S+ + +T DG W SP + + +Q+L + A
Sbjct: 177 YHQILWPSEHAGYGAMSSSSVCQTPLGLGDG-WFKDFNTSSQGVSPTLSEITQKLNRVAS 235
Query: 458 DDNKNISAWPAH--SGHSTPHPSK--------PNNDTLLEQV-----ETGRKTETGTSCR 502
+ + W G+ P+ P L EQV + K + R
Sbjct: 236 SEGRAPPPWATALCGGYRAEEPTSKLSCNATLPLPSPLTEQVAPYLLKVAEKVKGPGMVR 295
Query: 503 LFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 560
LFG+ L+ + ++A + V + T I ++ + S + K E
Sbjct: 296 LFGVNLMENTNNAAAATAGNASVGAGETSARITGSVEGSGQLSAFSKVTKVVNE------ 349
Query: 561 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 620
SP+E QS+QS + R+R KVQM G AVGRA+DL +L GY+ L +ELE+MF+IK
Sbjct: 350 --SPREIQSQQSSI--GRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIK---D 402
Query: 621 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ +++ + D+EGD M VGDDPW EFC MV++I I +D K M P
Sbjct: 403 IKQNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDP 449
>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
Length = 681
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 207/400 (51%), Gaps = 38/400 (9%)
Query: 5 LGSLSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
L++P+ ++ R+LW ACAG + VP G VYYFPQGH E EL+
Sbjct: 4 FADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA- 62
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHS 122
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K S
Sbjct: 63 ---RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPAS 119
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F+K LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGT 179
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C------------- 223
PRRHLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R C
Sbjct: 180 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPG 239
Query: 224 ------LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLN 275
L R +S ++ + L A+ F V Y PR S +F +
Sbjct: 240 WDQYGGLMRGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAA 299
Query: 276 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 333
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V WDE
Sbjct: 300 AVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDE 359
Query: 334 PASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 372
P + RVSPW +E + S+ P + + K+PR+
Sbjct: 360 PDLLQNVKRVSPWLVE--LVSSMPAINLSSFSPPRKKPRI 397
>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
Length = 705
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 210/421 (49%), Gaps = 76/421 (18%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------QQSSMP--------- 232
WSTFV K+L+AGD+ VFLR E G+L VG+R R S+ P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 233 -SSVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRT 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRA 299
Query: 268 S--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSK 323
S +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 324 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDL 381
WR L+V WDEP + RVSPW +E + S P + + P PR + +P P D
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDF 412
Query: 382 P 382
P
Sbjct: 413 P 413
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 642 DPWHEFCNMVKRIFI---CSSQDVKK 664
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
Length = 681
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 208/401 (51%), Gaps = 40/401 (9%)
Query: 5 LGSLSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
L++P+ ++ R+LW ACAG + VP G VYYFPQGH E EL+
Sbjct: 4 FADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA- 62
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHS 122
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K S
Sbjct: 63 ---RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPAS 119
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F+K LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGT 179
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---------------- 226
PRRHLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R R
Sbjct: 180 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPG 239
Query: 227 --QQSSMPSSVISSQSMHLG--------VLATASHAVATQTMFVVYYKPRTS--QFIISL 274
Q + S + G V+ A A Q VVYY PR S +F +
Sbjct: 240 WDQYGGLMRGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYY-PRASTPEFCVRA 298
Query: 275 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 332
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V WD
Sbjct: 299 AAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWD 358
Query: 333 EPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 372
EP + RVSPW +E + S+ P + + K+PR+
Sbjct: 359 EPDLLQNVKRVSPWLVE--LVSSMPAIHLSSFSPPRKKPRI 397
>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
Length = 705
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 210/421 (49%), Gaps = 76/421 (18%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------QQSSMP--------- 232
WSTFV K+L+AGD+ VFLR E G+L VG+R R S+ P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 233 -SSVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRT 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRA 299
Query: 268 S--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSK 323
S +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 324 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDL 381
WR L+V WDEP + RVSPW +E + S P + + P PR + +P P D
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDF 412
Query: 382 P 382
P
Sbjct: 413 P 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 642 DPWHEFCNMVKRIFI---CSSQDVKK 664
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 694
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 206/403 (51%), Gaps = 38/403 (9%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLE--ASTNQELN 60
G L+ P+ + + R+LW ACAG + VP G VYYFPQGH E A+ +
Sbjct: 4 FGDLTDPAPGGAERCVDRQLWLACAGGMCTVPPVGSSVYYFPQGHAEHALGLAAAGPGVG 63
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV 120
L R+P+ + CRV + MA+ +TDEV+A I L+P + D K
Sbjct: 64 G---LSRVPALLPCRVAAVRYMADPDTDEVFAGIRLVPLRQDVQDDGAAAAGEDEEHEKP 120
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
SF+K LT SD + GGFSV R A P LD + P Q +VAKD+HG W+F+HI+R
Sbjct: 121 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYR 180
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPS-- 233
G PRRHLLTTGWS FV K+LVAGD+ VFLRG+ G+LHVG+R R ++ S+P
Sbjct: 181 GTPRRHLLTTGWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWE 240
Query: 234 --SVISSQSMHLGV------------------LATASHAVATQTMFVVYYKPRTS--QFI 271
+ + M G +A A+ + F V Y PR S +F
Sbjct: 241 NQQLYTMGPMRGGGNVSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEFC 300
Query: 272 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 329
+ A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR L+V
Sbjct: 301 VRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQV 360
Query: 330 QWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
WDEP + RVSPW +E + +L K+PR+
Sbjct: 361 TWDEPDLLQNVKRVSPWLVELVSSMPAIHLASSFSPPRKKPRI 403
>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
Length = 704
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 210/421 (49%), Gaps = 76/421 (18%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCR+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRLA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------QQSSMP--------- 232
WSTFV K+L+AGD+ VFLR E G+L VG+R R S+ P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 233 -SSVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRT 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRA 299
Query: 268 S--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSK 323
S +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 324 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDL 381
WR L+V WDEP + RVSPW +E + S P + + P PR + +P P D
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDF 412
Query: 382 P 382
P
Sbjct: 413 P 413
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 595 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 652
Query: 642 DPWHEFCNMVKRIFI---CSSQDVKK 664
+P+ +F KR+ I S +V+K
Sbjct: 653 EPFSDFMRATKRLTIKMDISGDNVRK 678
>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 595
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 212/393 (53%), Gaps = 53/393 (13%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK-ILC 74
D L +LW ACAG +V +P+ G +V YFPQGH EQ A+T + + + PS I C
Sbjct: 10 DRLDAQLWHACAGGMVQLPQVGAKVIYFPQGHGEQ--AATTPDFSASMG----PSGTIPC 63
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
RVV+++ +A+ ETDEV+A++ L PE + P+ P K SF+K LT SD +
Sbjct: 64 RVVSVNFLADTETDEVFARMRLQPEGLHGLNDMTEEAPSSPPPEKPASFAKTLTQSDANN 123
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A PPLD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTTGWST 183
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----QQSSMPSSVISSQSMHLGVLATAS 250
FV K+LVAGD VFLR +GEL VGVR R SS S+S G T+S
Sbjct: 184 FVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSNGVSRSGSQGASTTSS 243
Query: 251 HA-----VATQTM------------FVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRY 291
A V +++ F V Y PR T++F + +A+++ + GMR+
Sbjct: 244 FARNRARVTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDHTWYAGMRF 303
Query: 292 KMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
KM FE EDS F GT+ V+ P W +S WR V WDEP + RVSPW++E
Sbjct: 304 KMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVSPWQVE 360
Query: 350 PFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 382
VA+ L M++PP P
Sbjct: 361 -LVAT-----------------LPMQLPPFSYP 375
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 574 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 633
L+ KV +G VGR LDL Y+ + D L MF + K +VY D E
Sbjct: 514 LSIGTEHCKVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSVPA---ASFKNRVVYQDGE 570
Query: 634 GDMMLVGDDPWHEFCNMVKRIFI 656
G + VG +P+ F V+R+ I
Sbjct: 571 GCTLPVGAEPYGNFVAAVRRLTI 593
>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
Length = 585
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 174/264 (65%), Gaps = 7/264 (2%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+R
Sbjct: 33 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYR 92
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++
Sbjct: 93 GQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTD 152
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
L +L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E E
Sbjct: 153 SKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENE 212
Query: 299 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
D+ ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S +
Sbjct: 213 DANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS- 270
Query: 358 NLVQPVLAKNKRPRLSMEVPPLDL 381
V L+ + R + PP DL
Sbjct: 271 --VTHRLSSSVSKRTKLCFPPSDL 292
>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 210/421 (49%), Gaps = 76/421 (18%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCR+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRLA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------QQSSMP--------- 232
WSTFV K+L+AGD+ VFLR E G+L VG+R R S+ P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 233 -SSVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRT 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRA 299
Query: 268 S--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSK 323
S +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 324 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDL 381
WR L+V WDEP + RVSPW +E + S P + + P PR + +P P D
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDF 412
Query: 382 P 382
P
Sbjct: 413 P 413
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 654
Query: 642 DPWHEFCNMVKRIFI---CSSQDVKK 664
+P+ +F KR+ I S +V+K
Sbjct: 655 EPFSDFMRATKRLTIKMDISGDNVRK 680
>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
Length = 705
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 210/421 (49%), Gaps = 76/421 (18%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCR+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRLA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------QQSSMP--------- 232
WSTFV K+L+AGD+ VFLR E G+L VG+R R S+ P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 233 -SSVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRT 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRA 299
Query: 268 S--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSK 323
S +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 324 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDL 381
WR L+V WDEP + RVSPW +E + S P + + P PR + +P P D
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDF 412
Query: 382 P 382
P
Sbjct: 413 P 413
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 642 DPWHEFCNMVKRIFI---CSSQDVKK 664
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
Length = 755
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 155/410 (37%), Positives = 209/410 (50%), Gaps = 62/410 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E A +N + FR+P ILCRV ++
Sbjct: 67 QLWHACAGGMVQMPSVNTKVFYFPQGHAEH--AQSNVDFGDS---FRIPPLILCRVASVK 121
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR--PKVHSFSKVLTASDTSTHGGF 138
+A+ ETDEV+++ITL+P +N D D K SF+K LT SD + GGF
Sbjct: 122 FLADSETDEVFSKITLIP--LRNSELENDDSDGDGSENSEKPASFAKTLTQSDANNGGGF 179
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 180 SVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQ 239
Query: 199 KRLVAGDTFVFLRGENGELHVGVR---------------------------------CLA 225
K+LVAGD+ VFLR E+GEL VG+R
Sbjct: 240 KKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYGGAFTAFL 299
Query: 226 RQQSSMPSSVISSQSMHLGVLATASH-----AVATQTMFVVYYKPRTS--QFIISLNKYL 278
R+++ + + + V + A + QT VVYY PR S +F I +
Sbjct: 300 REENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYY-PRASTPEFCIKTSAVK 358
Query: 279 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 336
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 359 AAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTWDEPDL 418
Query: 337 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLDL 381
+ RVSPW +E N+ LA PR + P PLD+
Sbjct: 419 LHNVKRVSPWLVE-----LVSNMSMIHLAPFSPPRKKLRFPQHPDFPLDV 463
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 545 KSDIAKEFKEKKQEQVQVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
+S I+++F K S S S C L + KV ++ VGR LDL+ + Y
Sbjct: 614 QSSISEQFSPAK------SSTTSASADFCWQLGLDTGHCKVFLESEDVGRTLDLSCVGSY 667
Query: 603 DHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC---S 658
+ L +L +MF I + ++ +R ++Y D G + G++P+ +F KR+ I
Sbjct: 668 EELYRKLAKMFGIERSEMLSR----VLYRDATGAVKQTGEEPFSDFMKTAKRLTILMDSG 723
Query: 659 SQDVKKM 665
S+D +++
Sbjct: 724 SKDTRRV 730
>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 709
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/406 (38%), Positives = 209/406 (51%), Gaps = 51/406 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E EL + LP+ +LC V +
Sbjct: 34 QLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRPLPALVLCCVAGVR 93
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSP--RPKVHSFSKVLTASDTST 134
+A+ +TDEV+A+I L+P E EP P +D P R K+ SF+K LT SD +
Sbjct: 94 FLADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSDPPEAREKLSSFAKTLTQSDANN 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 154 GGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWST 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVR-----------CLA------------------ 225
FV K+LVAGD+ VFLR E+GEL VG+R C++
Sbjct: 214 FVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAPGYGGFSAFLKDEE 273
Query: 226 -RQQSSMPSSVISSQS-MHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 281
+ + P+ + + + + + A+ A F V Y PR S +F++ A+
Sbjct: 274 NKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTPEFVVKAAAMQAAM 333
Query: 282 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 339
+ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 334 RIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRLLQVTWDEPDLLQN 393
Query: 340 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD 380
VSPW +E V+S P + P PR + VP PLD
Sbjct: 394 VKCVSPWLVE-LVSSIPPIHLGPF----SPPRKKLRVPQHPDFPLD 434
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 18/160 (11%)
Query: 503 LFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK-SDIAKEFKEKKQEQ 559
LFG ++ TSS E + + I + + A SDG S I F + E
Sbjct: 548 LFGKAILTEQQMTSSGSRETLSSGATGNSSPISAALKAGNTSDGSGSSICIGFSSQGHEA 607
Query: 560 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 619
S L KV M+ VGR +DL+ YD L L +MF I +
Sbjct: 608 ------------SDLGLEAGHCKVFMESEDVGRTIDLSVFGSYDELYGRLADMFGIDKEE 655
Query: 620 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 659
T + Y D G +M G P+ +F + +R+ I S
Sbjct: 656 ITS---HLRYRDTAGAVMHTGGLPFSDFMKVARRLTITSG 692
>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
Length = 222
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 147/205 (71%), Gaps = 6/205 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EAST +ELN+ P LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
IHL E +DE Y +ITL+P+ +Q T + + RP V+SF+KVLTASDTS G
Sbjct: 84 AIHLKVENNSDETYVEITLMPDTTQVVIPTEN---ENQFRPIVNSFTKVLTASDTSAQGE 140
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV KHA ECLPPLDM+Q P QEL+A DLHG +WRFKH +R PR TTGW+ F T
Sbjct: 141 FSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTT 197
Query: 198 SKRLVAGDTFVFLRGENGELHVGVR 222
SK+LV GD VF RGE GEL VG+R
Sbjct: 198 SKKLVVGDVIVFARGETGELRVGIR 222
>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
vinifera]
Length = 247
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 146/215 (67%), Gaps = 35/215 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY+ELW AC PLV++P + +RVYYFPQGHME LEAS +QEL+Q++P F LPSKILC+ V
Sbjct: 36 LYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASMHQELDQKMPSFNLPSKILCKXV 95
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
N ++ I VH F K LTASDTSTHGG
Sbjct: 96 NF----------IHNCI-------------------------VHPFCKTLTASDTSTHGG 120
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSVLR+H ECLPPLDM+Q+ P QELVAKD+HG E F+HIF+GQPR HLLTTGWS FV+
Sbjct: 121 FSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPFRHIFQGQPRCHLLTTGWSVFVS 180
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 232
+KRL GD +FLR ENGEL VGVR L RQ +++P
Sbjct: 181 TKRLAVGDALIFLRKENGELCVGVRRLTRQLNNVP 215
>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
Length = 699
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 196/383 (51%), Gaps = 50/383 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV +
Sbjct: 22 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVR 75
Query: 81 LMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 76 FMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDAN 135
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 136 NGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 195
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG---- 244
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 196 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 255
Query: 245 ---------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 281
VL A+ A Q V+YY PR S +F + A+
Sbjct: 256 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRASTPEFCVRAAAVRTAM 314
Query: 282 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 339
++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 315 AVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQN 374
Query: 340 PDRVSPWEIEPFVASATPNLVQP 362
RV PW +E + S+ PNL P
Sbjct: 375 VKRVCPWLVE--LVSSMPNLHLP 395
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 569 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 628
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 604 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 660
Query: 629 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
Y G++ GD+P+ F +++ I
Sbjct: 661 YRSPAGEVKHAGDEPFCAFVKSARKLRI 688
>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
Length = 695
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 196/383 (51%), Gaps = 50/383 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV +
Sbjct: 18 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVR 71
Query: 81 LMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 72 FMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDAN 131
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 132 NGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 191
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG---- 244
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 192 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 251
Query: 245 ---------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 281
VL A+ A Q V+YY PR S +F + A+
Sbjct: 252 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRASTPEFCVRAAAVRTAM 310
Query: 282 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 339
++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 311 AVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQN 370
Query: 340 PDRVSPWEIEPFVASATPNLVQP 362
RV PW +E + S+ PNL P
Sbjct: 371 VKRVCPWLVE--LVSSMPNLHLP 391
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 569 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 628
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 600 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 656
Query: 629 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
Y G++ GD+P+ F +++ I
Sbjct: 657 YRSPAGEVKHAGDEPFCAFVKSARKLRI 684
>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 209/421 (49%), Gaps = 76/421 (18%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCR+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRLA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------QQSSMP--------- 232
WSTFV K+L+AGD+ VFLR E G+L VG+R R S+ P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 233 -SSVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRT 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRA 299
Query: 268 S--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSK 323
S +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 324 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDL 381
WR L+V WDEP + R SPW +E + S P + + P PR + +P P D
Sbjct: 360 WRLLQVAWDEPDLLQNVKRASPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDF 412
Query: 382 P 382
P
Sbjct: 413 P 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 654
Query: 642 DPWHEFCNMVKRIFI---CSSQDVKK 664
+P+ +F KR+ I S +V+K
Sbjct: 655 EPFSDFMRATKRLTIKMDISGDNVRK 680
>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
Length = 702
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 192/381 (50%), Gaps = 55/381 (14%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E S + + P RLP ILCRV
Sbjct: 20 LDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSVDF---RNFP--RLPPYILCRVS 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP----CPADSPRPKVHSFSKVLTASDTS 133
I MA+ ETDEVYA+I L P S+ + + K SF+K LT SD +
Sbjct: 75 GIKFMADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQENKPASFAKTLTQSDAN 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 135 NGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 194
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS----VISSQSMHLG----- 244
TFV K+LVAGD+ VFLR ENG+L +G+R R P S + M G
Sbjct: 195 TFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGNCVMPYGGFNSF 254
Query: 245 --------------------------------VLATASHAVATQTMFVVYYKPRTS--QF 270
V+ A+ A Q VVYY PR S +F
Sbjct: 255 FREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVYY-PRASTPEF 313
Query: 271 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 328
+ + A ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+
Sbjct: 314 CVKASMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPDSPWRLLQ 373
Query: 329 VQWDEPASITRPDRVSPWEIE 349
V WDEP + RVSPW +E
Sbjct: 374 VTWDEPDLLQNVKRVSPWLVE 394
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 525 SLTTEGHIIS-TISAAADSDGKSDIAKEFKEKKQEQV--QVSPKES--QSKQSCLTSNRS 579
SL++ G +S ++ + S+G D F + + Q P+ S + Q C NR
Sbjct: 550 SLSSSGDTVSPVLTGNSSSEGNLDKIANFSDGSGSALHQQGLPEHSSYEGFQWC-KGNRQ 608
Query: 580 RT---------KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYT 630
T KV M+ VGR LDL+ L YD L +L +MF I+ ++ T ++Y
Sbjct: 609 ETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIE---NSETLNNVLYR 665
Query: 631 DDEGDMMLVGDDPWHEFCNMVKRIFI 656
D G + +GD+P+ +F +R+ I
Sbjct: 666 DIAGIVKHIGDEPFSDFMKTARRLTI 691
>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
Length = 653
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 208/677 (30%), Positives = 302/677 (44%), Gaps = 101/677 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + +P+ P +LCRV+ I
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLPI---PPMVLCRVLAIK 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
MA+ E+DEV+A++ L+P E +E D +S K SF+K LT SD +
Sbjct: 73 YMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNG 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 133 GGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNF 192
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------------------- 226
V K+LVAGD+ VF+R ENG+L VG+R R
Sbjct: 193 VNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLRED 252
Query: 227 QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEA 280
+ +S+ S S + V+ A+ A++ + VVYY + TS+F + A
Sbjct: 253 ESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDARAA 312
Query: 281 VNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 338
+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP +
Sbjct: 313 MRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQ 372
Query: 339 RPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP----------PLDLPSAASA 387
RV+PW +E V++ V P+ L PR M +P + +PS S
Sbjct: 373 NVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSN 426
Query: 388 PWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVK 447
P S L + V + R + H + SD + +++R P
Sbjct: 427 PLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPP----PPPPSSL 480
Query: 448 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIE 507
D KN + + +TP NDT ++ + LFG
Sbjct: 481 QLSPSLGLRNIDTKNEKGFCFLTMGTTPC-----NDTKSKK----------SHIVLFGKL 525
Query: 508 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 567
++ P E++ T +I T ++ S+ +EF + SP S
Sbjct: 526 IL-------PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEG----SPC-S 573
Query: 568 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEI 627
+ KV M+ VGR LDL+ L Y+ L +L +MF IK + +
Sbjct: 574 KKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSV 630
Query: 628 VYTDDEGDMMLVGDDPW 644
+Y D G + G++P+
Sbjct: 631 LYRDASGAIKYAGNEPF 647
>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
Length = 1045
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/254 (51%), Positives = 175/254 (68%), Gaps = 8/254 (3%)
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQ
Sbjct: 8 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQ 67
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
P+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH
Sbjct: 68 PKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMH 127
Query: 243 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+
Sbjct: 128 IGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEEC 187
Query: 301 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP
Sbjct: 188 GVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFY 244
Query: 360 VQPVLAKNKRPRLS 373
+ P RPR S
Sbjct: 245 ICP--PPFFRPRFS 256
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 918 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 976
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 977 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1007
>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
Length = 711
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 205/383 (53%), Gaps = 43/383 (11%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQ 61
L++P++ + + R+LW ACAG + VP G VYYFPQGH E L + +L+
Sbjct: 4 FADLTEPAAAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSA 63
Query: 62 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPR 117
R+P+ + CRV + MA+ +TDEV+A+I L+P + + D A +
Sbjct: 64 A----RVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQ 119
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
K SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+H
Sbjct: 120 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRH 179
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS---- 233
I+RG PRRHLLTTGWSTFV K+LVAGD+ VFLRG++G+LHVG+R R
Sbjct: 180 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGD 239
Query: 234 -SVISSQSMHLGVL---------ATASHAV-------------ATQTMFVVYYKPRTS-- 268
S + + G++ A A V A Q+ VVYY PR S
Sbjct: 240 DSPAAGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PRASTP 298
Query: 269 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 326
+F + A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR
Sbjct: 299 EFCVRAAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRL 358
Query: 327 LKVQWDEPASITRPDRVSPWEIE 349
L+V WDEP + RVSPW +E
Sbjct: 359 LQVTWDEPDLLQNVKRVSPWLVE 381
>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
Length = 689
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 205/383 (53%), Gaps = 43/383 (11%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQ 61
L++P++ + + R+LW ACAG + VP G VYYFPQGH E L + +L+
Sbjct: 4 FADLTEPAAAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSA 63
Query: 62 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPR 117
R+P+ + CRV + MA+ +TDEV+A+I L+P + + D A +
Sbjct: 64 A----RVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQ 119
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
K SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+H
Sbjct: 120 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRH 179
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS---- 233
I+RG PRRHLLTTGWSTFV K+LVAGD+ VFLRG++G+LHVG+R R
Sbjct: 180 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGD 239
Query: 234 -SVISSQSMHLGVL---------ATASHAV-------------ATQTMFVVYYKPRTS-- 268
S + + G++ A A V A Q+ VVYY PR S
Sbjct: 240 DSPAAGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PRASTP 298
Query: 269 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 326
+F + A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR
Sbjct: 299 EFCVRAAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRL 358
Query: 327 LKVQWDEPASITRPDRVSPWEIE 349
L+V WDEP + RVSPW +E
Sbjct: 359 LQVTWDEPDLLQNVKRVSPWLVE 381
>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 670
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 195/365 (53%), Gaps = 45/365 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVVNI 79
+LW ACAG +V +P +V+YFPQGH E A +N + RIP+ P ILCRV +
Sbjct: 11 QLWHACAGGMVQMPPVNSKVFYFPQGHAEH--AQSNVDFGAARIPI---PPLILCRVAAV 65
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+A+ ETDEV+A++ L+P S+ + D K SF+K LT SD + GGF
Sbjct: 66 KFLADPETDEVFARLRLVPLRNSELDYEDSDANGEAEGSEKPASFAKTLTQSDANNGGGF 125
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++A+D+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 126 SVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQ 185
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS------------------------- 233
K+LVAGD+ VFLR ENG+L VG+R R P
Sbjct: 186 KKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGPYGAFSGFM 245
Query: 234 ------SVISSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFA 286
+ +S +S+ V AS+ Q VVYY + T +F I + A+ ++
Sbjct: 246 REESGRAKVSGESVREAVTLAASN----QAFEVVYYPRANTPEFCIRTSAVRGAMRIQWC 301
Query: 287 VGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 344
GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP + RVS
Sbjct: 302 SGMRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDLLHNVKRVS 361
Query: 345 PWEIE 349
PW +E
Sbjct: 362 PWLVE 366
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 574 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 633
L S+ S KV M+ VGR LDL+ L Y L L MF I+ + ++Y D
Sbjct: 553 LGSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIE---RSDMLSHVLYCDSS 609
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
G + +G++P+ EF KR+ I + + K
Sbjct: 610 GALKQIGEEPFSEFMKTAKRLTILTDSNNK 639
>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 700
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 198/387 (51%), Gaps = 66/387 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E + + +L P R+P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 201 LVAGDTFVFLRGENGELHVGVR-------------------------------------- 222
LVAGD+ VF+R NG+L VG+R
Sbjct: 199 LVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGE 258
Query: 223 ---CLARQQSSM---PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISL 274
AR + + P V+ + ++ A + Q VVYY PR S +F +
Sbjct: 259 EDDAAARGKVRVLVRPEEVVEAANL----------AASGQPFEVVYY-PRASTPEFCVKA 307
Query: 275 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 332
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V WD
Sbjct: 308 GAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWD 367
Query: 333 EPASITRPDRVSPWEIEPFVASATPNL 359
EP + RVSPW +E + S+TP +
Sbjct: 368 EPDLLQNVKRVSPWLVE--LVSSTPAI 392
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 639
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 623 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 678
Query: 640 GDDPWHEFCNMVKRIFI 656
GD+P+ EF +R+ I
Sbjct: 679 GDEPFSEFTKTARRLTI 695
>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 698
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 210/694 (30%), Positives = 307/694 (44%), Gaps = 85/694 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV+YFPQGH E A + + P ++PS LCRV I
Sbjct: 21 QLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDF---RNCP--KVPSYTLCRVSAIK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGF 138
+A+ +TDEV+A++ L+P D S + K SF+K LT SD + GGF
Sbjct: 76 FLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTSFAKTLTQSDANNGGGF 135
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 136 SVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNH 195
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI---------------------- 236
K+LVAGD+ VFLR ENG+L VG+R R P S
Sbjct: 196 KKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAFLRE 255
Query: 237 -------SSQSMH-----LG--------VLATASHAVATQTMFVVYYKPRTS--QFIISL 274
S+ M+ +G V A A Q +++Y PR S +F +
Sbjct: 256 DDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFY-PRASTPEFCVKA 314
Query: 275 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 332
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WD
Sbjct: 315 ALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWRLLQVTWD 374
Query: 333 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR 392
EP + RVSPW +E V+S +P + P K+ R D P P +
Sbjct: 375 EPDLLQNVKRVSPWLVE-LVSSMSPIHLAPFSPPRKKFRYPQHP---DFPLDNQPPVPSF 430
Query: 393 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPR------- 445
+ H D H H S + +S+ QS G + R
Sbjct: 431 SSYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHVSKLQS-GLFSIGYRSLDPAAG 489
Query: 446 -VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLF 504
+ S + E ++N+S + HST K + + + GR T
Sbjct: 490 STRLSGNVMTEKPSMSENVSCLLTMA-HSTQASKKFDGVKTPQLILFGRPILT------- 541
Query: 505 GIEL-INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ-EQVQV 562
EL ++ + S V + +++G+ ++ +D G + + E E Q
Sbjct: 542 --ELQMSQSFSGDTVSPVGTGNSSSDGN-GDKMTNLSDGSGSALHQQGLPEGSAGENFQW 598
Query: 563 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 622
Q L + ++ + V GR LDL++L Y+ L +L MF I ++
Sbjct: 599 YKDNCQEIDPNLDIGHCKVFMESEDV--GRTLDLSSLGSYEELYRKLGNMFGID---NSE 653
Query: 623 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
T ++Y D G + VGD+ + +F +R+ I
Sbjct: 654 TLNHVLYRDVSGAVKHVGDEQFSDFIKTARRLTI 687
>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
Length = 779
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 209/424 (49%), Gaps = 74/424 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L +LW ACAG +V +P G +V YFPQGH EQ A IP F R ILCRV
Sbjct: 22 LDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTILCRV 72
Query: 77 VNIHLMAEQETDEVYAQITLLPEPS----------QNEPTTPDPCPADSPRPKVHSFSKV 126
+++ +A+ ETDEVYA++ L PE + +E P + P SF+K
Sbjct: 73 ISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKP----ASFAKT 128
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 129 LTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTPRRH 188
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV----ISSQSMH 242
LLTTGWSTFV K+LVAGD VFLR +GEL VGVR R + S + QS +
Sbjct: 189 LLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPGQSGY 248
Query: 243 LGVLATASHAVATQTM------------------------FVVYYKPR--TSQFIISLNK 276
+L+ + + F V Y PR T++F + +
Sbjct: 249 SELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVYYPRASTAEFCVRASV 308
Query: 277 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 334
++ + + GMR+KM FE EDS F GT+ V+ P W S WR L+V WDEP
Sbjct: 309 VKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRWPSSPWRILQVSWDEP 368
Query: 335 ASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLA 394
+ +RVSPW++E LV L M++PP LP P +
Sbjct: 369 DLLQGVNRVSPWQVE---------LVS---------TLPMQLPPFSLPRKKIRPLDLQFG 410
Query: 395 QSHN 398
+S
Sbjct: 411 ESQG 414
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ + VGR LDL+ Y+ L D L MF + K +L R +VY D EG + +G
Sbjct: 692 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 747
Query: 641 DDPWHEFCNMVKRIFICS 658
+P+ F V+R+ I +
Sbjct: 748 GEPYGNFVKSVRRLTILA 765
>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 701
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 209/682 (30%), Positives = 302/682 (44%), Gaps = 89/682 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV+YFPQGH E A + + P ++PS LCRV I
Sbjct: 21 QLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDF---RNCP--KVPSYTLCRVSAIK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGF 138
+A+ +TDEV+A++ L+P D S + K SF+K LT SD + GGF
Sbjct: 76 FLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTSFAKTLTQSDANNGGGF 135
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 136 SVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNH 195
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI---------------------- 236
K+LVAGD+ VFLR ENG+L VG+R R P S
Sbjct: 196 KKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAFLRE 255
Query: 237 -------SSQSMH-----LG--------VLATASHAVATQTMFVVYYKPRTS--QFIISL 274
S+ M+ +G V A A Q +++Y PR S +F +
Sbjct: 256 DDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFY-PRASTPEFCVKA 314
Query: 275 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 332
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WD
Sbjct: 315 ALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWRLLQVTWD 374
Query: 333 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR 392
EP + RVSPW +E V+S +P + P K+ R D P P +
Sbjct: 375 EPDLLQNVKRVSPWLVE-LVSSMSPIHLAPFSPPRKKFRYPQHP---DFPLDNQPPVPSF 430
Query: 393 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPR------- 445
+ H D H H S + +S+ QS G + R
Sbjct: 431 SSYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHVSKLQS-GLFSIGYRSLDPAAG 489
Query: 446 -VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK--TETGTSCR 502
+ S + E ++N+S + HST K + + + GR TE S
Sbjct: 490 STRLSGNVMTEKPSMSENVSCLLTMA-HSTQASKKFDGVKTPQLILFGRPILTELQMSQS 548
Query: 503 LFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 560
G + + SS+ +++L+ S + +G + + F+ K +
Sbjct: 549 FSGDTVSPVGTGNSSSDGNGDKMTNLSDGSG--SALHQQGLPEGSA--GENFQWYKDNRQ 604
Query: 561 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 620
++ P + KV M+ VGR LDL++L Y+ L +L MF I +
Sbjct: 605 EIDP----------NLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGID---N 651
Query: 621 TRTKWEIVYTDDEGDMMLVGDD 642
+ T ++Y D G + VGD+
Sbjct: 652 SETLNHVLYRDVSGAVKHVGDE 673
>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 647
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 201/376 (53%), Gaps = 53/376 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E N + ++P F + CRVV +
Sbjct: 21 QLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVNFKTCPKVPPF-----VPCRVVAVK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
MA+ ETDEVYA++ L+P + + D A++ R K SF+K LT SD + GGFSV
Sbjct: 76 YMADPETDEVYAKLKLVPLNANDVDYDHDVIGAET-RDKPASFAKTLTQSDANNGGGFSV 134
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 135 PRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 194
Query: 201 LVAGDTFVFLRGENGELHVGVRCLAR------QQSS----------MPSSVIS------- 237
LVAGD+ VFLR ENG+L VG+R + + SS MP S S
Sbjct: 195 LVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPYSGFSPFLREDD 254
Query: 238 --------SQSMHLGV------------LATASHAVATQTMFVVYYKPRTS--QFIISLN 275
S ++ V + A++ A + F V Y PR S +F + +
Sbjct: 255 NRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVYYPRASTPEFCVKAS 314
Query: 276 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 333
A+ ++ G+R+KM FE EDS F GT+ V+ P +W +S WR L+V WDE
Sbjct: 315 LVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNWPNSPWRLLQVTWDE 374
Query: 334 PASITRPDRVSPWEIE 349
P + RVSPW +E
Sbjct: 375 PDLLQNVRRVSPWLVE 390
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 640
KV M+ VGR +DL+ L YD L +L +MF I K ++ +R ++Y D G + +G
Sbjct: 565 KVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIEKSEMLSR----VLYCDSVGAIKHIG 620
Query: 641 DDPWHEFCNMVKRIFI 656
D+P+ +F KR+ I
Sbjct: 621 DEPFSDFTRTAKRLTI 636
>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
Length = 716
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 195/378 (51%), Gaps = 56/378 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + + +P R+P+ +LCRV +
Sbjct: 14 QLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQGPVD------LPAGRVPALVLCRVAAVR 67
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
MA+ +TDEV+A+I L P EP + + + K SF+K LT SD + G
Sbjct: 68 FMADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQEDKPASFAKTLTQSDANNGG 127
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 128 GFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFV 187
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV--------------ISSQSMH 242
K+LVAGD+ VF+R ENG+L VG+R + P + + SM
Sbjct: 188 NQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHHHQQPPPPQGGGYAGFSMF 247
Query: 243 L---------------------------GVLATASHAVATQTMFVVYYKPRTS--QFIIS 273
L V+ A+ AV+ Q VVYY PR S +F +
Sbjct: 248 LRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQPFEVVYY-PRASTPEFCVK 306
Query: 274 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 331
A+ ++ GMR+KM FE EDS F GTV V P W +S WR L+V W
Sbjct: 307 AGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVADPIRWPNSPWRLLQVAW 366
Query: 332 DEPASITRPDRVSPWEIE 349
DEP + RVSPW +E
Sbjct: 367 DEPDLLQNVKRVSPWLVE 384
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMML 638
KV MQ VGR LDL+ + Y+ L L +MF + K +L + + Y DD G +
Sbjct: 632 CKVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDKAELTS----HVFYRDDASGALKH 687
Query: 639 VGDDPWHEFCNMVKRIFICSSQ 660
GD+P+ EF +R+ I + +
Sbjct: 688 PGDEPFSEFTKTARRLTILTDE 709
>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
Length = 702
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 211/422 (50%), Gaps = 77/422 (18%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YF QGH E A P F R+P ILCRVV
Sbjct: 10 QLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---------KVHSFSKVLT 128
+ +A+ ETDEV+++ITLLP P + D +P P K SF+K LT
Sbjct: 61 AVKFLADAETDEVFSKITLLPLPGNDLDLENDAVLGLTPSPDGNGPNGNEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------QQSSMP------ 232
TTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R +++P
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNGVGSDNNNIPYPGFSG 240
Query: 233 ----SSVISSQSMHL---GVLATASHAVA-------------------TQTMFVVYYKPR 266
+S+ M + G ++A A Q VVYY PR
Sbjct: 241 FLRDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARGQAFEVVYY-PR 299
Query: 267 TS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDS 322
S +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S
Sbjct: 300 ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 359
Query: 323 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD 380
WR L+V WDEP + RVSPW +E + S P + + P PR + +P P +
Sbjct: 360 PWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPTIHLSPF-----SPRKKLRIPQPFE 412
Query: 381 LP 382
P
Sbjct: 413 FP 414
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 593 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFCIEERSDLLT--HVVYRDANGVIKRIGD 650
Query: 642 DPWHEFCNMVKRIFI 656
+P+ +F KR+ I
Sbjct: 651 EPFSDFMRATKRLTI 665
>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 693
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 211/417 (50%), Gaps = 72/417 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YF QGH E A P F R+P ILCRVV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---------RPKVHSFSKVLT 128
++ +A+ ETDEV+A+ITLLP P + D +P + K SF+K LT
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------QQSSMP---------- 232
TTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R S P
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRD 240
Query: 233 --SSVISSQSMHLGVLATA-SHAVAT------------------QTMFVVYYKPRTS--Q 269
S+ +S+ M + +A AT Q VVYY PR S +
Sbjct: 241 DESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPE 299
Query: 270 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 327
F + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 300 FCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLL 359
Query: 328 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 382
+V WDEP + RVSPW +E + S P + + P PR + +P P + P
Sbjct: 360 QVAWDEPDLLQNVKRVSPWLVE--LVSNMPTIHLSPF-----SPRKKIRIPQPFEFP 409
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGVIKRIGD 641
Query: 642 DPWHEFCNMVKRIFI 656
+P+ +F KR+ I
Sbjct: 642 EPFSDFMKATKRLTI 656
>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
Length = 835
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/439 (36%), Positives = 213/439 (48%), Gaps = 89/439 (20%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L +LW ACAG +V +P G +V YFPQGH EQ A IP F R ILCRV
Sbjct: 63 LDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTILCRV 113
Query: 77 VNIHLMAEQETDEVYAQITLLPEPS----------QNEPTTPDPCPADSPRPKVHSFSKV 126
+++ +A+ ETDEVYA++ L PE + +E P + P SF+K
Sbjct: 114 ISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKP----ASFAKT 169
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 170 LTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTPRRH 229
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---------------QQSSM 231
LLTTGWSTFV K+LVAGD VFLR +GEL VGVR R Q S+
Sbjct: 230 LLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPGQRSL 289
Query: 232 PSSV----ISSQSMHLGVLATASHAVATQTM------------------------FVVYY 263
P + I S+S + +L+ + + F V Y
Sbjct: 290 PQNSSRWEIKSESGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVY 349
Query: 264 KPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HW 319
PR T++F + + ++ + + GMR+KM FE EDS F GT+ V+ P W
Sbjct: 350 YPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRW 409
Query: 320 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 379
S WR L+V WDEP + +RVSPW++E LV L M++PP
Sbjct: 410 PSSPWRILQVSWDEPDLLQGVNRVSPWQVE---------LVS---------TLPMQLPPF 451
Query: 380 DLPSAASAPWSARLAQSHN 398
LP P + +S
Sbjct: 452 SLPRKKIRPLDLQFGESQG 470
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ + VGR LDL+ Y+ L D L MF + K +L R +VY D EG + +G
Sbjct: 748 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 803
Query: 641 DDPWHEFCNMVKRIFICS 658
+P+ F V+R+ I +
Sbjct: 804 GEPYGNFVKSVRRLTILA 821
>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
Length = 647
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 225/447 (50%), Gaps = 56/447 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + + + +P+ P +LCRV+ I
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAEN---AYDHVDFKNLPI---PPMVLCRVLAIK 72
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD----SPRPKVHSFSKVLTASDTSTHG 136
MA+ E+DEV+A++ L+P N+ D ++ + K SF+K LT SD + G
Sbjct: 73 YMADPESDEVFAKLKLIPL-KDNDHEYRDGEESNGLGSNNSEKTPSFAKTLTQSDANNGG 131
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSNFV 191
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR--------------------------CLARQQSS 230
K+LVAGD+ VF+R ENG+L VG+R L R
Sbjct: 192 NQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYSSLLRDDER 251
Query: 231 MPSSVISSQSMHL---GVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFA 286
SS ++ + + V+ A AV+ + VVYY + +S+F + A+ +
Sbjct: 252 RSSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYYPRASSSEFCVKALDARAAMRIPWC 311
Query: 287 VGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 344
GMR+KM FE EDS F GTV V P W +S WR L+V WDEP + RV+
Sbjct: 312 SGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQVAWDEPDLLQYVKRVN 371
Query: 345 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAPWSARLAQSH 397
PW +E V++ V P++ PR M +P + +PS AS P S
Sbjct: 372 PWLVE-LVSN-----VHPIIPSFSPPRKKMRLPQHPDYNTRISVPSFASNPLIRSSPLSS 425
Query: 398 NLTQLSVTAEDKRIDNHVAWHHKHSDF 424
L + V + R + H + SD
Sbjct: 426 VLDNVPVGLQGARHNAHQYYGLSSSDL 452
>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 700
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/407 (38%), Positives = 205/407 (50%), Gaps = 60/407 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ +TDEV+A+I L+P + + A + K SF+K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 139 NGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWS 198
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ-------------- 239
TFV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 199 TFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGG 258
Query: 240 -SMHL------------------------GVLATASHAVATQTMFVVYYKPRTS--QFII 272
SM L V+ A+ AV+ Q VVYY PR S +F +
Sbjct: 259 FSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PRASTPEFCV 317
Query: 273 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 330
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V
Sbjct: 318 KAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVS 377
Query: 331 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 377
WDEP + RVSPW +E + S P + LA PR + VP
Sbjct: 378 WDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 419
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 640
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G + G
Sbjct: 618 KVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHTG 673
Query: 641 DDPWHEFCNMVKRIFICS 658
D+P+ EF +R+ I +
Sbjct: 674 DEPFSEFTKTARRLNILT 691
>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
Length = 700
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/407 (38%), Positives = 205/407 (50%), Gaps = 60/407 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ +TDEV+A+I L+P + + A + K SF+K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 139 NGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWS 198
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ-------------- 239
TFV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 199 TFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGG 258
Query: 240 -SMHL------------------------GVLATASHAVATQTMFVVYYKPRTS--QFII 272
SM L V+ A+ AV+ Q VVYY PR S +F +
Sbjct: 259 FSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PRASTPEFCV 317
Query: 273 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 330
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V
Sbjct: 318 KAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVS 377
Query: 331 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 377
WDEP + RVSPW +E + S P + LA PR + VP
Sbjct: 378 WDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 419
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 640
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G + G
Sbjct: 618 KVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHTG 673
Query: 641 DDPWHEFCNMVKRIFICS 658
D+P+ EF +R+ I +
Sbjct: 674 DEPFSEFTKTARRLNILT 691
>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
Length = 647
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 204/674 (30%), Positives = 298/674 (44%), Gaps = 89/674 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + + IP +LCRV ++
Sbjct: 12 QLWHACAGSMVQIPPVNSKVFYFPQGHAEHSLYPVDFSSSPPIPAL-----LLCRVASVK 66
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH---SFSKVLTASDTSTHGG 137
+A+ ETDEVYA+I L+P P+ EP + V SF+K LT SD + GG
Sbjct: 67 FLADAETDEVYAKIMLVPLPN-TEPDLENDAVFGGGSDNVEKPASFAKTLTQSDANNGGG 125
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R A P LD P Q ++A+D+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 126 FSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHLLTTGWSSFVN 185
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV------ISSQSMHLGVLATASH 251
K+LVAGD+ VFLR ENGEL VG+R R + S +S G L
Sbjct: 186 HKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSPYGGFSGFLKEDES 245
Query: 252 AVATQTM------------------------FVVYYKPRTS--QFIISLNKYLEAVNNKF 285
+ + F + Y PR S +F + + A+ +
Sbjct: 246 KITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYYPRASTPEFCVKASAVRAAMRVPW 305
Query: 286 AVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 343
MR+KM FE ED F GTV V P W +S WR L+V WDEP + +RV
Sbjct: 306 CSLMRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLLQVTWDEPDLLQNVERV 365
Query: 344 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LDLPSAAS---APWSARLAQSHN- 398
SPW +E V + P + P PR + +P LD P P+S +S N
Sbjct: 366 SPWLVE-LVPNMLPVHLSPF--STVTPRKKLRLPKHLDFPLVEQFPMPPFSGHPLRSSNP 422
Query: 399 LTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS----DGEWLTSPRVKFSQQL-F 453
L LS D H SS+ +++ +S G L P+ + +
Sbjct: 423 LRCLS----DNAPAGIQGARHAQFRLSSSDPHLNKLKSGLFPSGFQLFDPQARVPNGISM 478
Query: 454 QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT 513
+ D N + + G+S+P ++ E G++ + LFG ++
Sbjct: 479 TKHTDSNDDNLSCLLTVGNSSPK----------KKSENGKRHQF----LLFGQPILTEQQ 524
Query: 514 SSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ---EQVQVSPKESQSK 570
S ++L E S ++S ++ ++ E + +Q +P+ +
Sbjct: 525 LSRSCSTGVKTALENEDK-RKDYSNGSESALENQLSPEKSFTTRLLWQQDYQAPEPGSAT 583
Query: 571 QSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYT 630
C KV ++ VGR LDLT L Y+ L L MF G+ + ++Y
Sbjct: 584 GHC--------KVFLESEDVGRTLDLTVLGSYEELYMRLANMF---GRERSEMLGHVLYR 632
Query: 631 DDEGDMMLVGDDPW 644
D G + GD+P+
Sbjct: 633 DATGAVKQTGDEPF 646
>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
Length = 309
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 175/256 (68%), Gaps = 4/256 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ IP + LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN-IPGYPSLPSKLICKLLSL 82
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGF
Sbjct: 83 TLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGF 142
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSP 262
Query: 259 FVVYYKPR-TSQFIIS 273
F ++Y PR S ++IS
Sbjct: 263 FTIFYNPRYYSSYLIS 278
>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
Length = 834
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 211/373 (56%), Gaps = 33/373 (8%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLP 69
P L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ IP + LP
Sbjct: 14 PEEEKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLP 73
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVL 127
+++C++ ++ + A+ ETDEVYAQ+TL P QN+P P S +P + F K L
Sbjct: 74 PQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP-TNYFCKTL 132
Query: 128 TASDTSTHGGFSVLRKHATECLPPL----------------DMNQSTPTQELVAKDLHG- 170
TASDTSTHGGFSV R+ A PPL Q P ++L
Sbjct: 133 TASDTSTHGGFSVPRRAAERVFPPLLHAGLFGLLLQITGGIVCRQRIPLSSRQRQELRNP 192
Query: 171 YEWRFKHIFRG----QPRRHLLTTGWSTFVTSKRLVAGDTFV----FLRGENGELHVGVR 222
W + + R +P R + T T++R V L E +L +G+R
Sbjct: 193 GSWNGRALARKSRTEKPCRTIETGRCWIVGTAQRRTGWPCGVPGGPGLGNEKNQLLLGIR 252
Query: 223 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEA 280
+R Q+ MPSSV+SS SMH+G+LA A+HA AT + F +++ PR S+F+I L+KY++A
Sbjct: 253 RASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKA 312
Query: 281 V-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 338
V + + +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE +
Sbjct: 313 VFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGE 372
Query: 339 RPDRVSPWEIEPF 351
RP RVS WEIEP
Sbjct: 373 RPPRVSLWEIEPL 385
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 733 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 791
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 669
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 792 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 828
>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
Length = 697
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 206/418 (49%), Gaps = 73/418 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YF QGH E A P F R+P ILCRVV
Sbjct: 10 QLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKVHSFSKV 126
++ +A+ ETDEV+A+ITLLP P + P + D + K SF+K
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDVNVNGNGNEKPASFAKT 120
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 121 LTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRH 180
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS------------- 233
LLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R
Sbjct: 181 LLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLGSDNPYPGFSGF 240
Query: 234 -----SVISSQSMHLGVLATASHAVA------------------TQTMFVVYYKPRTS-- 268
+ +S+ M + +A A Q VVYY PR S
Sbjct: 241 LRDDETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFEVVYY-PRASTP 299
Query: 269 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 326
+F + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR
Sbjct: 300 EFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRL 359
Query: 327 LKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 382
L+V WDEP + RVSPW +E + S P + + P PR + +P P + P
Sbjct: 360 LQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKIRIPQPFEFP 410
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 589 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGAIKRIGD 646
Query: 642 DPWHEFCNMVKRIFI 656
+P+ +F KR+ I
Sbjct: 647 EPFSDFMKSTKRLTI 661
>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 701
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 192/381 (50%), Gaps = 61/381 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P+ +V+YFPQGH E A TN L RLP ILC V +
Sbjct: 11 QLWHACAGGMVQMPQMNSKVFYFPQGHAEH--AHTNIHL-------RLPPFILCNVEAVK 61
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-----SPRPKVHSFSKVLTASDTSTH 135
MA ETDEV+A+++LLP + D D S K SF+K LT SD +
Sbjct: 62 FMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKPASFAKTLTQSDANNG 121
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD P Q +VAKD+HG WRF+HI+RG PRRHLLTTGWS+F
Sbjct: 122 GGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTTGWSSF 181
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR----------------------------C---- 223
V K+LVAGD+ VFLR ENG+L VG+R C
Sbjct: 182 VNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVWSSASGSGNGNCGIGP 241
Query: 224 -------LARQQSSMPSSVISSQSMHLGVLA----TASHAVATQTMFVVYYKPRTS--QF 270
L + + + + S + V A A A+ F V Y PR S +F
Sbjct: 242 YGPFSFFLKEENKMLRNGCGGNLSGRVKVRAEDVVEAVTLAASNKPFEVVYYPRASTPEF 301
Query: 271 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 328
+ + A+ ++ GMR+KM FE ED+ F GT+ V+ P W +S WR L+
Sbjct: 302 CVKASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVVDPIRWPNSPWRLLQ 361
Query: 329 VQWDEPASITRPDRVSPWEIE 349
V WDEP + RVSPW +E
Sbjct: 362 VTWDEPDLLQNVKRVSPWLVE 382
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 542 SDGKSDIAKEFKEKKQEQV--QVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLT 597
SD K D AK + Q + Q SP ++ S + L + KV ++ VGR LDL+
Sbjct: 550 SDDK-DKAKCLMDDSQSTLSQQFSPGKASSAEFSWQLGLDTGHCKVFLESEDVGRTLDLS 608
Query: 598 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
Y+ L L MF I+ + ++Y D G G++P+ +F KR+ I
Sbjct: 609 LFGSYEDLYRRLAIMFGIE---RSEILNHVLYHDAAGAAKKTGEEPFSDFMKTAKRLTIL 665
Query: 658 ---SSQDVKK 664
SS+++K+
Sbjct: 666 TDSSSKNIKR 675
>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
Length = 443
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 195/386 (50%), Gaps = 54/386 (13%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK 71
S + L +LW ACAG +V +P +V+YFPQGH E + + + L ++P
Sbjct: 3 SCEKNCLDSQLWHACAGGMVQMPPMNSKVFYFPQGHAEHTLGNVDFSM-----LPKIPPL 57
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---KVHSFSKVLT 128
ILCRV + +A+ ETDEVYA+I L+P NEP D S K SF+K LT
Sbjct: 58 ILCRVGAVKYLADVETDEVYAKIRLVPV-GNNEPEFEDAVLGSSASETAEKPTSFAKTLT 116
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG PRRHLL
Sbjct: 117 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLL 176
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS---SMPSSVISSQSMHLGV 245
TTGWSTFV K+LVAGD+ VFLR +NG+L VG+R R + PS + G
Sbjct: 177 TTGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTGAPGSYGG 236
Query: 246 LAT--------------------------------------ASHAVATQTMFVVYYKPR- 266
+ A++ AT F V Y PR
Sbjct: 237 FSAYLREDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYPRA 296
Query: 267 -TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSK 323
T +F + + A+ ++ G+R+KM FE EDS F GT+ V+ P HW +S
Sbjct: 297 NTPEFCVRASSVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADPIHWPNSP 356
Query: 324 WRSLKVQWDEPASITRPDRVSPWEIE 349
WR L+V WDEP + VSPW +E
Sbjct: 357 WRLLQVTWDEPDLLQNVKHVSPWLVE 382
>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
Japonica Group]
gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
Length = 760
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 204/411 (49%), Gaps = 63/411 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-----ELNQRIPLFRLPSKILCR 75
+LW ACAG +V +P RVYYF QGH E + EL R LP +LCR
Sbjct: 78 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCR 133
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKV 126
V + +A++++DEVYA+I L P P + E PD CP A P P K SF+K
Sbjct: 134 VEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKT 193
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 194 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 253
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-- 244
LLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 254 LLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGG 313
Query: 245 ---------------------------------VLATASHAVATQTMFVVYYKPRTS--Q 269
V+ AS A + Q V YY PR S
Sbjct: 314 GFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PRASTPD 372
Query: 270 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWRSL 327
F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR L
Sbjct: 373 FVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLL 432
Query: 328 KVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 378
+V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 433 QVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 478
>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
Length = 698
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 204/411 (49%), Gaps = 63/411 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-----ELNQRIPLFRLPSKILCR 75
+LW ACAG +V +P RVYYF QGH E + EL R LP +LCR
Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCR 71
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKV 126
V + +A++++DEVYA+I L P P + E PD CP A P P K SF+K
Sbjct: 72 VEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKT 131
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 132 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 191
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-- 244
LLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 192 LLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGG 251
Query: 245 ---------------------------------VLATASHAVATQTMFVVYYKPRTS--Q 269
V+ AS A + Q V YY PR S
Sbjct: 252 GFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PRASTPD 310
Query: 270 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWRSL 327
F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR L
Sbjct: 311 FVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLL 370
Query: 328 KVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 378
+V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 371 QVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 416
>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 644
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/379 (40%), Positives = 196/379 (51%), Gaps = 45/379 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGG 131
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------ 243
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 244 ------------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 283
V+ AS A + Q VVYY PR S +F++ A+ N
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRN 310
Query: 284 KFAVGMRYKMRFEGEDSPERR-FSGTVVG--VEDFSPHWKDSKWRSLKVQWDEPASITRP 340
++ GMR+KM FE EDS F GT+ V D + W +S WR L+V WDEP +
Sbjct: 311 QWCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLLQVSWDEPDLLQNV 369
Query: 341 DRVSPWEIEPFVASATPNL 359
V+PW +E + S+ P +
Sbjct: 370 KCVNPWLVE--IVSSIPPI 386
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 570 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 629
K S L KV M+ VGR +DL+ Y+ L +L +MF I+ R + Y
Sbjct: 541 KASELGLEDGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIEKAEIMR---HLCY 597
Query: 630 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
D G + G++P+++F + +R+ I + + P
Sbjct: 598 RDAAGAVRHTGEEPFNDFMKVARRLTIIEGTEGRPQKP 635
>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
Length = 690
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/410 (38%), Positives = 203/410 (49%), Gaps = 61/410 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-----ELNQRIPLFRLPSKILCR 75
+LW ACAG +V +P RVYYF QGH E + EL R LP +LCR
Sbjct: 36 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCR 91
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKV 126
V + +A++++DEVYA+I L P P + E PD CP A P P K SF+K
Sbjct: 92 VEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKT 151
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 152 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 211
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-- 244
LLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 212 LLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGG 271
Query: 245 ---------------------------------VLATASHAVATQTMFVVYY-KPRTSQF 270
V+ AS A + Q V YY + T F
Sbjct: 272 GFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDF 331
Query: 271 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPH-WKDSKWRSLK 328
++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR L+
Sbjct: 332 VVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQ 391
Query: 329 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 378
V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 392 VTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 436
>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
Length = 708
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 209/401 (52%), Gaps = 38/401 (9%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQ 61
L++P++ + + R+LW ACAG + VP G VYYFPQGH E L + +L+
Sbjct: 4 FADLTEPATAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGTADLSA 63
Query: 62 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH 121
R+P+ + CRV + MA+ +TDEV+A+I L+P A + K
Sbjct: 64 A----RVPALVPCRVAAVRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEKPA 119
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG
Sbjct: 120 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRG 179
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C------------ 223
PRRHLLTTGWSTFV K+LVAGD+ VFLRG++G+LHVG+R C
Sbjct: 180 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPS 239
Query: 224 --------LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIIS 273
L R S ++ + + +A A+ A F Y PR S +F +
Sbjct: 240 PGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEFCVR 299
Query: 274 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 331
A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR L+V W
Sbjct: 300 AAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTW 359
Query: 332 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
DEP + RVSPW +E V+S + K+PR+
Sbjct: 360 DEPDLLQNVKRVSPWLVE-LVSSMPAIHLASFSPPRKKPRI 399
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 567 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG-QLHTRTKW 625
SQ + S L + KV ++ VGR LDL+ L +D L L EMF I+G +L +R
Sbjct: 611 SQQQVSELGLEPGQCKVFVESDTVGRNLDLSALSSFDELYRRLSEMFGIEGAELRSR--- 667
Query: 626 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
++Y G++ GD+P+ +F +R+ I
Sbjct: 668 -VLYRCATGEVKHAGDEPFSDFVRSARRLTI 697
>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
Length = 575
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 170/280 (60%), Gaps = 23/280 (8%)
Query: 113 ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 172
D + H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +
Sbjct: 21 GDGEKLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMK 80
Query: 173 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 232
WRF+HI+RGQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++
Sbjct: 81 WRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRAVQLKNEAL 140
Query: 233 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMR 290
++ L +L+ + ++ +++F + + PR S+FI+ K+L+ +N F++G R
Sbjct: 141 LEAVNCTDSKLLMLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLKGLNYPFSIGTR 200
Query: 291 YKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
+K+ + ED+ ER F G + G+ + P W SKW+SL V+WD + +RVSPW+IE
Sbjct: 201 FKVGCKNEDANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKYSHQNRVSPWDIE 259
Query: 350 PFVASAT-------------------PNLVQPVLAKNKRP 370
+S + NL P+L N RP
Sbjct: 260 RVGSSVSVTHCLSSCVSKRMKLCFPQGNLDAPILDGNGRP 299
>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/417 (36%), Positives = 208/417 (49%), Gaps = 59/417 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + + L R P+ ILCRV +
Sbjct: 12 QLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSA-----LPRSPALILCRVAAVK 66
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTHG 136
+A+ ETDEVYA+I ++P ++ D S K +SF+K LT SD + G
Sbjct: 67 FLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQSDANNGG 126
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 127 GFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHLLTTGWSSFV 186
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP----------------SSVISSQS 240
K+LVAGD+ VFLR ENGEL VG+R R P S+ + +
Sbjct: 187 NQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSAFLREEM 246
Query: 241 MHLGVLAT------------------ASHAVATQTMFVVYYKPR--TSQFIISLNKYLEA 280
G L + A+H ++ F V Y PR T +F + + A
Sbjct: 247 SKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPRANTPEFCVRASSVNAA 306
Query: 281 VNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 338
+ ++ GMR+KM FE EDS F GT+ ++ P W +S WR L+V WDEP +
Sbjct: 307 MRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAWDEPDLLQ 366
Query: 339 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAP 388
VSPW +E + S P + L+ PR + +PP LPS + P
Sbjct: 367 NVKHVSPWLVE--LVSNMPVI---HLSPFSPPRKKLRLPPDFSLDSQFQLPSFSGNP 418
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGD 635
N KV ++ VGR LDL+ + Y+ L L MF + + + TR ++Y D G
Sbjct: 587 NTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR----VLYHDATGA 642
Query: 636 MMLVGDDPWHEFCNMVKR--IFICSSQDVKK 664
+ GD+P+ +F KR I + SS ++K+
Sbjct: 643 VKHTGDEPFSDFVKSAKRLTILMNSSSNIKR 673
>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 154/417 (36%), Positives = 208/417 (49%), Gaps = 59/417 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + + L R P+ ILCRV +
Sbjct: 12 QLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFS-----ALPRSPALILCRVAAVK 66
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTHG 136
+A+ ETDEVYA+I ++P ++ D S K +SF+K LT SD + G
Sbjct: 67 FLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQSDANNGG 126
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 127 GFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLTTGWSSFV 186
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR---------------------------CLARQQS 229
K+LVAGD+ VFLR ENGEL VG+R R++
Sbjct: 187 NQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSAFLREEM 246
Query: 230 SMPSSVISSQSMHLG--------VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEA 280
S ++ S G V+ A A + Q VVYY + T +F + + A
Sbjct: 247 SKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPRANTPEFCVRASSVNAA 306
Query: 281 VNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 338
+ ++ GMR+KM FE EDS F GT+ ++ P W +S WR L+V WDEP +
Sbjct: 307 MRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAWDEPDLLQ 366
Query: 339 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAP 388
VSPW +E + S P + L+ PR + +PP LPS + P
Sbjct: 367 NVKHVSPWLVE--LVSNMPVI---HLSPFSPPRKKLRLPPDFSLDSQFQLPSFSGNP 418
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGD 635
N KV ++ VGR LDL+ + Y+ L L MF + + + TR ++Y D G
Sbjct: 587 NTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR----VLYHDATGA 642
Query: 636 MMLVGDDPWHEFCNMVKR--IFICSSQDVKK 664
+ GD+P+ +F KR I + SS ++K+
Sbjct: 643 VKHTGDEPFSDFVKSAKRLTILMNSSSNIKR 673
>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 697
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 191/375 (50%), Gaps = 55/375 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P+ +V+YFPQGH E + + R+P ILC V +
Sbjct: 11 QLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTTID---------LRVPPFILCNVEAVK 61
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTH 135
MA+ ETD+V+A+++L+P S+ P + D+ P K SF+K LT SD +
Sbjct: 62 FMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKPASFAKTLTQSDANNG 121
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD P Q +VAKD+HG WRF+HI+RG PRRHLLTTGWS+F
Sbjct: 122 GGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTTGWSSF 181
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR--------------------------------- 222
V K+LVAGD+ VFLR ENG+L VG+R
Sbjct: 182 VNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSASGSGIGPFSFFL 241
Query: 223 ----CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNK 276
+ R + ++ + + A A+ F V Y PR S +F + +
Sbjct: 242 KEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVYYPRASTPEFCVKASS 301
Query: 277 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 334
A+ ++ GMR+KM FE ED+ F GT+ V+ P W +S WR L+V WDEP
Sbjct: 302 VGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICWPNSPWRLLQVTWDEP 361
Query: 335 ASITRPDRVSPWEIE 349
+ RVSPW +E
Sbjct: 362 DLLQNVKRVSPWLVE 376
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 561 QVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 618
Q SP ++ S + L + KV ++ VGR LDL+ Y+ L L MF I+
Sbjct: 566 QFSPGKASSAEFFWQLGLDTGHCKVFLESEDVGRTLDLSQFGSYEELYRRLGNMFGIE-- 623
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
+ ++Y D G + G++P+ +F KR+ I + K +
Sbjct: 624 -RSEILNHVLYYDAAGAVKQTGEEPFSDFMKTAKRLTILTDSGSKNI 669
>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
Length = 706
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 205/415 (49%), Gaps = 60/415 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + +P+ +LCRV +H
Sbjct: 25 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQCGGGDFPPGAGAGRGIPALVLCRVAGVH 84
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---------KVHSFSKVLTASD 131
MA+ +TDEV+A+I L+P +P K SF+K LT SD
Sbjct: 85 FMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAEKPASFAKTLTQSD 144
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 145 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTG 204
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVR----------------------------C 223
WS+FV K+LVAGD+ VF+R ENG+L VG+R
Sbjct: 205 WSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPELLPPPPPPPGTNYGGFSM 264
Query: 224 LARQQSSMPSSVISSQSMHLGV---------LATASHAVATQTMFVVYYKPRTS--QFII 272
R + + ++++ + G +A A++ A+ F V Y PR S +F +
Sbjct: 265 FLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLAASGQPFDVVYYPRASTPEFCV 324
Query: 273 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 330
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V
Sbjct: 325 KAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVQVSDPIRWPNSPWRLLQVT 384
Query: 331 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD 380
WDEP + RVSPW +E + S P + LA PR + VP PLD
Sbjct: 385 WDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVPFYPELPLD 434
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
K+ MQ VGR LDL + YD L L +MF I+ R ++ Y D G + GD
Sbjct: 628 KIFMQSEDVGRTLDLAAVGSYDELYRRLADMFGIEKAELMR---QVFYRDAAGALKHTGD 684
Query: 642 DPWHEFCNMVKRIFICSS 659
+P+ +F +R+ I +
Sbjct: 685 EPFSDFTKTARRLTILTG 702
>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
Length = 714
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 232/484 (47%), Gaps = 81/484 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P G +V YFPQGH EQ AST + +P +P CRVV
Sbjct: 36 LDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQ-AASTPEFPRTLVPNGSVP----CRVV 90
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+++ +A+ ETDEV+A+I L PE + D A P K SF+K LT SD + GG
Sbjct: 91 SVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSDANNGGG 150
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS+ R A PPLD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 151 FSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 210
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSS----------MPSSVI----------S 237
K+LVAGD VFLR +GEL VGVR R S+ +S I
Sbjct: 211 QKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSRWEVKGTE 270
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFI-----ISLNKYLEAV-----NNKFAV 287
S S LG + +A+ + P TS F ++ LEA +F V
Sbjct: 271 SFSDFLGGVGDNGYALNSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSGERFEV 330
Query: 288 ----------------------------GMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 317
GMR+KM FE EDS F GT+ V+ P
Sbjct: 331 VYYPRASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPV 390
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR------ 371
W S WR L+V WDEP + +RVSPW++E + + P + PV K+ R
Sbjct: 391 LWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLE--LVATLPMQLPPVSLPKKKLRTVQPQE 448
Query: 372 LSMEVPP-LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS---- 426
L ++ P L LP A ++ + LA SV +D + A H + + +
Sbjct: 449 LPLQPPGLLSLPLAGTSNFGGHLATPWG---SSVLLDDASVGMQGARHDQFNGLPTVDFR 505
Query: 427 NSNF 430
NSN+
Sbjct: 506 NSNY 509
>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
Length = 707
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 206/402 (51%), Gaps = 38/402 (9%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
L++P++ + + R+LW ACAG + VP G V YFPQGH E + +
Sbjct: 4 FADLTEPAAAGAERCVDRQLWLACAGSMCTVPLVGASVCYFPQGHAEH---ALGLDGAAD 60
Query: 63 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
+ R+P+ + CRV + MA+ +TDEV+A+I L+P + D A + K
Sbjct: 61 LSAARVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQEKP 120
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+R
Sbjct: 121 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYR 180
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS-- 238
G PRRHLLTTGWSTFV K+L+AGD+ VFLRG++G+LHVG+R R
Sbjct: 181 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAP 240
Query: 239 -------QSMHLGVLATASHAVA------------------TQTMFVVYY-KPRTSQFII 272
+ G ++ + A A Q+ VVYY + T +F +
Sbjct: 241 TPGWHHYAGLIRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCV 300
Query: 273 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 330
A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR L+V
Sbjct: 301 RAAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVT 360
Query: 331 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
WDEP + RVSPW +E V+S + K+PR+
Sbjct: 361 WDEPDLLQNVKRVSPWLVE-LVSSMPAIHLASFSPPRKKPRI 401
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 579 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 638
+ KV ++ VGR LDL+ L +D L L EMF ++G + ++Y G++
Sbjct: 622 GQCKVFVESDTVGRNLDLSALGSFDELYGRLSEMFGVEG---AEMRSRVLYRGATGEVRH 678
Query: 639 VGDDPWHEFCNMVKRIFICS 658
GD+P+ +F +RI I +
Sbjct: 679 AGDEPFSDFVKSARRITILT 698
>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
Length = 699
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/383 (38%), Positives = 192/383 (50%), Gaps = 50/383 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV +
Sbjct: 22 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVR 75
Query: 81 LMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 76 FMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDAN 135
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
G R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 136 NGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 195
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG---- 244
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 196 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 255
Query: 245 ---------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 281
VL A+ A Q V+YY PR S +F + A+
Sbjct: 256 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRASTPEFCVRAAAVRTAM 314
Query: 282 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 339
++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 315 AVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQN 374
Query: 340 PDRVSPWEIEPFVASATPNLVQP 362
RV PW +E + S+ PNL P
Sbjct: 375 VKRVCPWLVE--LVSSMPNLHLP 395
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 569 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 628
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 604 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 660
Query: 629 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
Y G++ GD+P+ F +++ I
Sbjct: 661 YRSPAGEVKHAGDEPFCAFVKSARKLRI 688
>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 703
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 219/738 (29%), Positives = 319/738 (43%), Gaps = 138/738 (18%)
Query: 5 LGSLSQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+ S+ P N D L +LW ACAG L+ +P +V YFPQGH E A N +
Sbjct: 1 MDSVIDPMMNHDKHLDSQLWHACAGGLIQLPTINSKVVYFPQGHTEH--AQGNVDFGNA- 57
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-------------NEPTTPDP 110
R+PS I CRV I MA+ ETDEV+A+I L P + NE + D
Sbjct: 58 ---RIPSIIPCRVSGIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQD- 113
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG
Sbjct: 114 --------KPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHG 165
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ--- 227
W+F+HI+RG PRRHLLTTGWS+FV K+LVAGD+ VFLR E G+L +GVR R
Sbjct: 166 EIWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGC 225
Query: 228 ----------QSSMPSSVISSQSM-----HLG----------------VLATASHAVATQ 256
+S S V S M LG V+ A A + Q
Sbjct: 226 GIDYSPGWNPTNSGSSLVGYSDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQ 285
Query: 257 TMFVVYYK-PRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVED 314
+ +VYY T +F++ + A+ + MR+KM FE EDS F GTV ++
Sbjct: 286 SFEIVYYPCAGTPEFVVKASSLRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQA 345
Query: 315 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 372
P W DS WR L+V WDEP + V+PW +E V P + V P K+PR
Sbjct: 346 ADPIRWPDSPWRMLQVTWDEPDLLQNVKSVNPWLVE--VVVNMPAIHVSPFSPPRKKPRF 403
Query: 373 SMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 432
++ +S + + N Q +TA A +H+ F
Sbjct: 404 PLQADSSGFGHLPMPSFSTNIFDTTNPLQ-GITANKIPAGIQGA---RHTQFG------- 452
Query: 433 RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 492
L+SP ++ S+ L + S H +TP P D G
Sbjct: 453 --------LSSPNLQISKLLPGQ-------FSPGLKHLDDATPLPGIRGEDIF-----AG 492
Query: 493 RKTETGTSCRLFGIELINH------ATSSAPSEKVPVSSLTTEGHII-----------ST 535
K +C L+ + + NH ++ + E S T HII ++
Sbjct: 493 MKNP--DNCSLW-LPMRNHIQSSKESSKESSKESSKESKETKPAHIILFGQLIFPNQQNS 549
Query: 536 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ------SCLTSNRSRTKVQMQGV- 588
S + D+ SD +E + +S +++ S + S L + + ++ + + V
Sbjct: 550 NSCSGDTMNASDANQEKASNLSDGSGLSSQQNGSLENSSEGGSTLYNGQDKSGLSLDTVY 609
Query: 589 --------AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
VG LDL++L Y+ L +L M + + ++Y D G VG
Sbjct: 610 CKVFVELENVGCNLDLSSLRSYEELYRKLGNMVGLGSSEMLNS---VLYQDTLGATKHVG 666
Query: 641 DDPWHEFCNMVKRIFICS 658
++P+ EF +++ I +
Sbjct: 667 EEPFSEFLKKAQKLTIST 684
>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 220/430 (51%), Gaps = 74/430 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVVNI 79
+LW ACAG +V +P +V+YFPQGH E A +N + RIP+ P ILC V +
Sbjct: 11 QLWHACAGGMVQMPPVNSKVFYFPQGHAEH--AQSNVDFGAARIPI---PPLILCCVAAV 65
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+A+ ETDEV+A++ ++P S+ + D A+ K SF+K LT SD + GGF
Sbjct: 66 KFLADPETDEVFARLRMVPLRNSELDYEDSDGNGAEGSE-KPASFAKTLTQSDANNGGGF 124
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 125 SVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQ 184
Query: 199 KRLVAGDTFVFLRGENGELHVGVR------------------------------------ 222
K+LVAGD+ VFLR ENG+L VG+R
Sbjct: 185 KKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSSSGGGLGPGPGLGLGPGPG 244
Query: 223 ------CLARQQSSMPSS---VISSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFII 272
R++S + S +S +S+ V AS+ Q VVYY + T +F I
Sbjct: 245 PYGAFSGFLREESKVVRSGRPKVSGESVREAVTLAASN----QPFEVVYYPRANTPEFCI 300
Query: 273 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 330
+ A+ +++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V
Sbjct: 301 RTSAVRGAMRIQWSSGMRFKMPFETEDSSRISWFMGTIASVQLLDPIRWPNSPWRLLQVT 360
Query: 331 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD----L 381
WDEP + RVSPW +E + S P + LA PR + P PLD +
Sbjct: 361 WDEPDLLHNVKRVSPWLVE--LVSNVPII---HLAPFSPPRKKLRFPQHPEFPLDFQFPI 415
Query: 382 PSAASAPWSA 391
PS + P+ +
Sbjct: 416 PSFSGNPFGS 425
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 574 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 633
+ S+ S KV ++ VGR LDL+ L Y+ L L MF I+ + ++Y D
Sbjct: 583 VGSDTSHCKVFIESEDVGRTLDLSCLGSYEELYMRLANMFGIE---RSEMLSHVLYRDAA 639
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
G + G++P+ EF KR+ I + + K
Sbjct: 640 GALKQTGEEPFSEFMKTAKRLTILTDSNNK 669
>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
Length = 680
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 209/722 (28%), Positives = 294/722 (40%), Gaps = 151/722 (20%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV YFPQGH E A N + R+P +LCRV +
Sbjct: 11 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNP----RIPPLVLCRVSAVK 64
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA----DSPRPKVHSFSKVLTASDTSTHG 136
+A+ E+DEVYA+I L+P + T D ++P K SF+K LT SD + G
Sbjct: 65 YLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPE-KPASFAKTLTQSDANNGG 123
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q ++AKD+HG WRF+HI+RG PRRHLLTTGWS FV
Sbjct: 124 GFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTTGWSNFV 183
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSMPSSVISSQSMHLGV----- 245
K LVAGD+ VFLR ENG+L VG+R C S + + S + G
Sbjct: 184 NKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRGYSGFLR 243
Query: 246 -------------------------LATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 278
+A A+ A FV+ Y PR S +F + +
Sbjct: 244 EDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVR 303
Query: 279 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR----------- 325
A+ ++ GM++KM FE +DS F G + V P W +S WR
Sbjct: 304 AAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVLEYEIQK 363
Query: 326 ------------SLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 372
L+V WDEP + RV+PW +E + S P++ + P K+ RL
Sbjct: 364 IVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVE--LVSHVPSIHLSPFSPPRKKLRL 421
Query: 373 SM--------EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 424
++P S A P S S N+ A H + SD
Sbjct: 422 QQQSEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQGAR------HAQFGLSSSDL 475
Query: 425 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDT 484
N K LF + + +A P+ + NN+
Sbjct: 476 HFN-------------------KLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNEN 516
Query: 485 LLEQVETGRKTETGTSCR--------LFG--IELINHATSSAPSEKVPVSSLTTEGHIIS 534
+ + G T+ LFG I + + S + +SS
Sbjct: 517 ISCLLTIGNSTQNSKKNNEIKAPYFFLFGQPILIEQQVSQSCSGDTAGISS--------- 567
Query: 535 TISAAADSDGKSDIAKEFKEKKQEQV-QVSPKESQSKQSCLTSNR-----------SRTK 582
SDG + F + Q P+ES S + LT + K
Sbjct: 568 -------SDGNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLTWYKDHQKTNLGLETGHCK 620
Query: 583 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 642
V M+ VGR LDL+ L Y+ L +L MF I+ ++Y D+ G + +GD
Sbjct: 621 VFMESEDVGRTLDLSILGSYEELYRKLANMFGIE---RAEMLSNVLYRDEAGIVKHIGDA 677
Query: 643 PW 644
P+
Sbjct: 678 PF 679
>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
Length = 619
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 204/399 (51%), Gaps = 54/399 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E A + ++ R+P I CR+
Sbjct: 16 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH--AHNKVDFSKT----RVPPLIPCRIS 69
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC----PADSPRPKVHSFSKVLTASDTS 133
+ MA+ ETDEVY ++ L P +NE + C + K SF+K LT SD +
Sbjct: 70 AMKYMADPETDEVYVKMKLTPL-RENELDFEEDCFFGNNGLESQEKPASFAKTLTQSDAN 128
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 129 NGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWS 188
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-------QQSSMPSSVISSQSMHLG-- 244
FV K+LVAGD+ VFLR ENG+L VG+R + Q S SS + S G
Sbjct: 189 NFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSPLFGGV 248
Query: 245 --------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNK 276
V+ + AV ++ VVYY PR S +F + ++
Sbjct: 249 GSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYY-PRASTPEFCVKVSS 307
Query: 277 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 334
A+ ++ GMR+KM FE EDS F GT+ V P W DS WR L+V WDEP
Sbjct: 308 VKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSPWRLLQVVWDEP 367
Query: 335 ASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 372
+ V+PW +E + S PN + P K+PR
Sbjct: 368 DLLQNVKCVNPWLVE--LVSNMPNFNLSPFTPPRKKPRF 404
>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
Length = 648
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 198/406 (48%), Gaps = 62/406 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW A AG +V +P+ +V+YFPQGH E N +IP F I CRV I
Sbjct: 31 QLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF-----IPCRVEAIR 85
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGG 137
MA ETDEVYA++ L+P D + K SF+K LT SD + GG
Sbjct: 86 YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGG 145
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS R A P LD + + P Q++ KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 146 FSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVS 205
Query: 198 SKRLVAGDTFVFLRGENGELHVGVR------------------------CLARQQSSMPS 233
K+L +GD+ VFLR ENG+LHVG+R C A PS
Sbjct: 206 DKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSGIGICAAPPYGGFPS 265
Query: 234 S-----------------VISSQSMHLG------VLATASHAVATQTMFVVYYKPR--TS 268
+IS M G V+ Q VVYY PR T
Sbjct: 266 FSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVVYY-PRSGTP 324
Query: 269 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSL 327
+F + + A+ ++ GMR+KM E EDS F GTV V+ P W DS WR L
Sbjct: 325 EFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADPSWSDSMWRLL 384
Query: 328 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 372
+V WDEP + RV+PW++E + S P++ + P + K+ RL
Sbjct: 385 EVTWDEPELLKNVKRVNPWQVE--IVSNMPSIPLSPFIPPRKKLRL 428
>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
Length = 590
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 202/395 (51%), Gaps = 48/395 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P RV+YFPQGH E + + + Q + + I C+V
Sbjct: 22 LDSQLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDFGRCQ------ISAMIPCKVS 75
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCP-----ADSPRPKVHSFSKVLTAS 130
I +A+ ETDEVYA+I L+P ++ + D C + K SF+K LT S
Sbjct: 76 AIKYLADPETDEVYAKIRLIPLIDRDVFLENSGDDCDDGLYNGAESQEKPASFAKTLTQS 135
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
D + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 136 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTT 195
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---QQSSMPSSVISSQSMHLG--- 244
GWS FV K+LVAGD+ VFLR +NG+L VG+R R + PS S G
Sbjct: 196 GWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWNSFGGYAAGFLR 255
Query: 245 -----------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 279
V+ A+ A Q +VYY PR S +F + +
Sbjct: 256 EDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYY-PRASTPEFCVRASAVRA 314
Query: 280 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 337
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 315 AMQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLL 374
Query: 338 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 372
RVSPW +E VA+ + P K+ R+
Sbjct: 375 QNVKRVSPWLVE-LVANMPAVHLSPFSPPRKKLRI 408
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 563 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 622
SP + ++ L KV M+ VGR LDL+ L Y+ L +L MF+I+ ++
Sbjct: 489 SPSYKEHWKTDLGLETGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIE---NSD 545
Query: 623 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
++Y D G + GD+P+ EF +R+ I
Sbjct: 546 MLSSVLYRDAAGAIKRTGDEPFSEFLKTARRLTI 579
>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
Length = 417
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 183/338 (54%), Gaps = 34/338 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAGP+V +P +V+YFPQGH E A+ + + +P +LCRV ++
Sbjct: 11 QLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAVDFPSSPPVPAL-----VLCRVASLK 65
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
MA+ ETDEVYA+I L+P P+ K SF+K LT SD + GGFSV
Sbjct: 66 FMADTETDEVYAKILLMPLPNTELDLEHVAVFGSDNAEKPASFAKTLTQSDANNGGGFSV 125
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A PPLD + P Q +VA D+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 126 PRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 185
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMP---SSVIS------SQSMHL-------- 243
LVAGD+ VFLR ENG L VG+R R + P S +S S+ M +
Sbjct: 186 LVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESKMMMMNRNGDWRG 245
Query: 244 -------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR 294
VL A+ A + Q VVYY PR S +F + + A+ + GMR+KM
Sbjct: 246 KGKLKAEAVLQAATLAASGQPFEVVYY-PRASTPEFCVKASSVKAAMRVPWCCGMRFKMA 304
Query: 295 FEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 330
FE EDS F GTV V+ P W +S WR +++
Sbjct: 305 FETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLFQLE 342
>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
Length = 701
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 187/381 (49%), Gaps = 62/381 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YF QGH E A P F R+P ILCRVV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---------RPKVHSFSKVLT 128
++ +A+ ETDEV+A+ITLLP P + D +P + K SF+K LT
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------QQSSMP---------- 232
TTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R S P
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRD 240
Query: 233 --SSVISSQSMHL-------------------GVLATASHAVATQTMFVVYYKPRTS--Q 269
S+ +S+ M + V + F V Y PR S +
Sbjct: 241 DESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVVYYPRASTPE 300
Query: 270 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 327
F + A+ + GMR KM FE EDS F GT V+ P W +S WR L
Sbjct: 301 FCVKAADVRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVADPIRWPNSPWRLL 360
Query: 328 KVQWDEPASITRPDRVSPWEI 348
+V WDEP RVSPW +
Sbjct: 361 QVAWDEPDLXQNVKRVSPWLV 381
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + L +L EMF I+ + T + Y D G + +GD
Sbjct: 585 KVFMESEDVGRTLDLSVIGSVQELYRKLAEMFHIEERPDLVT--HVGYRDANGVIKRIGD 642
Query: 642 DPWHEFCNMVKRIFI 656
+P+ +F KR+ I
Sbjct: 643 EPFSDFMKATKRLTI 657
>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
Length = 1252
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 198/406 (48%), Gaps = 62/406 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW A AG +V +P+ +V+YFPQGH E N +IP F I CRV I
Sbjct: 31 QLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF-----IPCRVEAIR 85
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGG 137
MA ETDEVYA++ L+P D + K SF+K LT SD + GG
Sbjct: 86 YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGG 145
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS R A P LD + + P Q++ KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 146 FSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVS 205
Query: 198 SKRLVAGDTFVFLRGENGELHVGVR------------------------CLARQQSSMPS 233
K+L +GD+ VFLR ENG+LHVG+R C A PS
Sbjct: 206 DKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSGIGICAAPPYGGFPS 265
Query: 234 S-----------------VISSQSMHLG------VLATASHAVATQTMFVVYYKPR--TS 268
+IS M G V+ Q VVYY PR T
Sbjct: 266 FSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVVYY-PRSGTP 324
Query: 269 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPHWKDSKWRSL 327
+F + + A+ ++ GMR+KM E EDS F GTV V+ P W DS WR L
Sbjct: 325 EFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADPSWSDSMWRLL 384
Query: 328 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 372
+V WDEP + RV+PW++E + S P++ + P + K+ RL
Sbjct: 385 EVTWDEPELLKNVKRVNPWQVE--IVSNMPSIPLSPFIPPRKKLRL 428
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 171/350 (48%), Gaps = 43/350 (12%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
LW A AG +V +P+ +V+YFPQGH E N +IP F I CRV +I
Sbjct: 810 LWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF-----IPCRVEDIRY 864
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGGF 138
MA ETDEVYA++ L+P D + K SF+K LT SD + GGF
Sbjct: 865 MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGF 924
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
S R A P +D + + P Q + KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 925 SCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSD 984
Query: 199 KRLVAGDTFVFLRGENGELHVGV--------RCLA-----------------RQQSSMPS 233
K+L +GD+ VFLR ENGEL VG+ C A R+
Sbjct: 985 KKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEEDNKLRRNGKGNG 1044
Query: 234 SVISSQSMHLG------VLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKF 285
+IS M G V+ Q VVYY PR T +F + + + ++
Sbjct: 1045 LLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYY-PRSGTPEFFVKTSLIGITLQIRW 1103
Query: 286 AVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEP 334
GMR+KM E EDS F GTV V+ P W DS WR L+ + +P
Sbjct: 1104 CPGMRFKMPIETEDSSRISWFIGTVASVQAADPSWPDSLWRLLQPSFQQP 1153
>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
Length = 670
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 206/400 (51%), Gaps = 55/400 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + +P+ + +LCRV+ I
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLPIHPM---VLCRVLAIK 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
MA+ E+DEVYA++ L+P E +E D +S K SF+K LT SD +
Sbjct: 73 YMADAESDEVYAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNG 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 133 GGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNF 192
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------------------- 226
V K+LVAGD+ VF+R ENG+L VG+R R
Sbjct: 193 VNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLRED 252
Query: 227 QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEA 280
+ +S+ S S + V+ A+ A++ + VVYY + TS+F + A
Sbjct: 253 ESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKAVDARAA 312
Query: 281 VNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 338
+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP +
Sbjct: 313 MRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQ 372
Query: 339 RPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 377
RV+PW +E V++ V P+ L PR M +P
Sbjct: 373 NVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLP 406
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ L Y+ L +L +MF IK + ++Y D G + G+
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSVLYRDASGAIKYAGN 644
Query: 642 DPWHEFCNMVKRIFICSSQ 660
+P+ EF +R+ I + Q
Sbjct: 645 EPFSEFLKTARRLTILTEQ 663
>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 715
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 198/407 (48%), Gaps = 54/407 (13%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK 71
S+ D + +LW ACAG + VP G VYYFPQGH EQ + ++ R+P
Sbjct: 14 SAADDAVDSQLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGAGAVDMP------RVPDL 67
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLP----EPSQN---EPTTPDPCPADSPRPKVHSFS 124
+ CRV + MA+ ++DEV+A+I LLP EP + +P D+ K SF+
Sbjct: 68 VPCRVSAVRFMADPQSDEVFAKIRLLPLRRGEPVADVGEAAAAREPLQQDADNNKPASFA 127
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LT SD + GGFSV R A P LD P Q + +D+HG E++F+HI+RG PR
Sbjct: 128 KTLTQSDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIYRGTPR 187
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGE---------NGELHVGVRCLARQQSSMPSSV 235
RHLLTTGWS FV K+L+AGD+ VFLR + + R PSS
Sbjct: 188 RHLLTTGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVEGPSSA 247
Query: 236 ISSQSMHLGVLATASHAVATQT-------------------------MFVVYYKPRTS-- 268
S + G++ + + +F V Y PR S
Sbjct: 248 ASGWDHYRGLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVYYPRASTP 307
Query: 269 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 326
+F + A+ ++ GMR+KM FE EDS F GTV GV P HW S WR
Sbjct: 308 EFCVRAGAVKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVHWPQSPWRL 367
Query: 327 LKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA-KNKRPRL 372
L+V WDEP + RV PW +E + S+ PNL P + K+PR+
Sbjct: 368 LQVSWDEPELLQNVKRVCPWLVE--LVSSMPNLHLPSFSPPRKKPRI 412
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 579 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 638
+ KV ++ A+GR LDL+ L ++ L + +MFDI+ + + Y G++
Sbjct: 636 GQCKVFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIE---SAELRNNVHYRSAAGEVKN 692
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD+P+ F +R+ I
Sbjct: 693 VGDEPFRAFVKSARRLTI 710
>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
Length = 588
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 177/275 (64%), Gaps = 6/275 (2%)
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG
Sbjct: 22 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 81
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++
Sbjct: 82 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 141
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVG 288
++S L +L++ + ++ +++F + + PR+ S+FI+ + L+++N+ F++G
Sbjct: 142 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIG 201
Query: 289 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 347
MR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSPWE
Sbjct: 202 MRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 260
Query: 348 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 382
IE S + + + + +KR +L LD P
Sbjct: 261 IERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 293
>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
Length = 587
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 177/275 (64%), Gaps = 6/275 (2%)
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 80
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++
Sbjct: 81 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 140
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVG 288
++S L +L++ + ++ +++F + + PR+ S+FI+ + L+++N+ F++G
Sbjct: 141 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIG 200
Query: 289 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 347
MR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSPWE
Sbjct: 201 MRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 259
Query: 348 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 382
IE S + + + + +KR +L LD P
Sbjct: 260 IERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 292
>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 186/387 (48%), Gaps = 63/387 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP--SKILCR 75
L +LW ACAG +V +P +V+YFPQGH E + + LP S LCR
Sbjct: 19 LDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHA--------CEPVDFRNLPGASHTLCR 70
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTA 129
V I MA+ ETDEV+A+I L+P S + + H SF+K LT
Sbjct: 71 VSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVSFAKTLTQ 130
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD + GGFSV R A P LD P Q L+AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLT 190
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV-------------- 235
TGWS FV K+LVAGD+ VFLR ENG+L VGVR R S P S+
Sbjct: 191 TGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNLVVPYGG 250
Query: 236 ---ISSQSMHLGV--------------------------LATASHAVATQTMFVVYYKPR 266
S + H V + A+ A F Y PR
Sbjct: 251 FGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFETVYYPR 310
Query: 267 --TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDS 322
T +F + + + ++ GMR+KM FE EDS F GTV V+D P W S
Sbjct: 311 ANTPEFFVKASLVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQDADPLCWPGS 370
Query: 323 KWRSLKVQWDEPASITRPDRVSPWEIE 349
WR L+V WDEP + RVSPW +E
Sbjct: 371 PWRLLQVTWDEPDLLQNVKRVSPWLVE 397
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV ++ VGR LDL L Y+ L +L +MF ++ ++ ++Y DD G +G+
Sbjct: 623 KVFLESEDVGRTLDLQLLESYEELYRKLADMFGLR---NSEKFSNLLYRDDNGITKHIGE 679
Query: 642 DPWHEFCNMVKRIFICS 658
+P+ F +R+ I +
Sbjct: 680 EPFSNFSKTARRLTIVT 696
>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
Length = 370
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 185/351 (52%), Gaps = 44/351 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E +L LPS +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR---ALPSLVLCSVTGVR 69
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPC---PADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT SD + G
Sbjct: 70 FLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADA-REKLSSFAKTLTQSDANNGG 128
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 129 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 188
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA--------- 247
K+LVAGD+ VFLR E+GEL VG+R + R + + G L+
Sbjct: 189 NQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFLKDEEGK 248
Query: 248 ----------------------TASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 283
AS A + Q VVYY PR S +F++ A+ N
Sbjct: 249 MMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRN 307
Query: 284 KFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 332
++ GMR+KM FE EDS F GT+ + P W +S WR L+V D
Sbjct: 308 QWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVLLD 358
>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
Length = 381
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 187/359 (52%), Gaps = 35/359 (9%)
Query: 5 LGSLSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
L++P+ ++ R+LW ACAG + VP G VYYFPQGH E EL+
Sbjct: 4 FADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA- 62
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHS 122
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K S
Sbjct: 63 ---RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPAS 119
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F+K LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGT 179
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C------------- 223
PRRHLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R C
Sbjct: 180 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPG 239
Query: 224 ------LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLN 275
L R +S ++ + L A+ F V Y PR S +F +
Sbjct: 240 WDQYGGLMRGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAA 299
Query: 276 KYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWD 332
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V+++
Sbjct: 300 AVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVRYN 358
>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
Length = 336
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 157/244 (64%), Gaps = 6/244 (2%)
Query: 142 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKL 61
Query: 202 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 261
V+GD +FLR +GEL +GVR A+ ++ SQ +++ + +A+++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVNAISSTNAFSI 121
Query: 262 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 318
Y PR +S FII +K+ + + + F+ GMR+KMR E ED+ E+RF+G VVGV D P
Sbjct: 122 CYNPRASSSGFIIPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVR 181
Query: 319 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 378
W SKWR L V+WD+ ++R +RVSPWEIEP + + P V+ KR R+ +
Sbjct: 182 WPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP--SGSAPVSSSLVMPSAKRTRVGFPITK 238
Query: 379 LDLP 382
D P
Sbjct: 239 ADFP 242
>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
Length = 698
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 186/374 (49%), Gaps = 42/374 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E + + +L P R+P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 201 LVAGDTFVFLR-GENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT---- 255
LVAGD+ VF+R G G+L VG+R + Q G +T
Sbjct: 199 LVAGDSIVFMRTGGTGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRG 258
Query: 256 -------------QTMFVVYYKPRTSQFIISLNKYLEAVN---------------NKFAV 287
+PR + + YL N ++
Sbjct: 259 EEDDEGQGQGAGAAGGGRRGRQPRGERAAVRGGLYLPKANTQSCASRRGRSAHHVTQWCA 318
Query: 288 GMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSP 345
GMR+KM FE EDS F GTV V+ P W +S WR L+V WDEP + RVSP
Sbjct: 319 GMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSP 378
Query: 346 WEIEPFVASATPNL 359
W +E + S+TP +
Sbjct: 379 WLVE--LVSSTPAI 390
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 639
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 621 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 676
Query: 640 GDDPWHEFCNMVKRIFI 656
GD+P+ EF +R+ I
Sbjct: 677 GDEPFSEFTKTARRLTI 693
>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
Length = 336
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/244 (45%), Positives = 156/244 (63%), Gaps = 6/244 (2%)
Query: 142 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKKL 61
Query: 202 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 261
V+GD +FLR +GEL +GVR A+ ++ SQ +++ + A+++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAFSI 121
Query: 262 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 318
Y PR +S FI+ +K+ + + + F+ GMR+KMR E ED+ E+RF+G VVGV D P
Sbjct: 122 CYNPRASSSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVR 181
Query: 319 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 378
W SKWR L V+WD+ ++R +RVSPWEIEP + + P V+ KR R+ +
Sbjct: 182 WPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP--SGSAPVSSSLVMPSAKRTRVGFPITK 238
Query: 379 LDLP 382
D P
Sbjct: 239 ADFP 242
>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 201/425 (47%), Gaps = 65/425 (15%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E + R+ S LCRV
Sbjct: 19 LDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVDFRNLPRV------SHNLCRVS 72
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASD 131
+I MA+ ETDEV+A+I L+P S E A K SF+K LT SD
Sbjct: 73 DIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVSFAKTLTQSD 132
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q L+AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 133 ANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLTTG 192
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV---------------- 235
WS FV K+L+AGD+ VF R ENG+L VGVR R P S+
Sbjct: 193 WSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSAVPSGGFG 252
Query: 236 ---------------------ISSQSMHLGVLATASHAVATQTM------FVVYYKPR-- 266
S++S+ A + T+ F V Y PR
Sbjct: 253 AFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEVVYYPRAN 312
Query: 267 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF-SPHWKDSKW 324
T +F + + A+ ++ GMR+KM FE EDS F GTV V+ S W S W
Sbjct: 313 TPEFCVKASLVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAADSLWWPHSPW 372
Query: 325 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LDLPS 383
R L+V WDEP + RVSPW +E +AS + P + PR + +P LD P
Sbjct: 373 RLLQVTWDEPDLLQNVKRVSPWLVE--LASNMAAIHFPPFSS---PRKKLRLPQHLDFPI 427
Query: 384 AASAP 388
P
Sbjct: 428 DGQFP 432
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
E++Q + + Q + L + KV M VGR LDL+ L Y+ L +L MF ++
Sbjct: 601 EELQWNKDKHQKSEPSLET--GHCKVFMDSEDVGRTLDLSLLGSYEELYRKLANMFGLR- 657
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 658
++ ++Y D G +G++P+ +F +R+ I +
Sbjct: 658 --NSEKFSNVLYRDINGITKHIGEEPFSDFFKTARRLTIVT 696
>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 608
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E E + R+P I CR+
Sbjct: 8 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKV--EYFGKNHQTRVPPLIPCRLS 65
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--------PADSPRPKVHSFSKVLTA 129
+ MA+ +TDEVY ++ L P + D C ++ SF+K LT
Sbjct: 66 AMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEKPPTSFAKTLTQ 125
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 126 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLT 185
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------------- 226
TGWS FV KRLVAGD+ VFLR ENG+L VG+R +
Sbjct: 186 TGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWNNPLFGGGGGF 245
Query: 227 ---QQSSMPSSVISSQSMHL-------GVLATASHAVATQTMFVVYYKPRTS--QFIISL 274
+SS S S + V+ + AV + VVYY PR S +F +
Sbjct: 246 LCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYY-PRASSPEFCVKA 304
Query: 275 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 332
+ A+ ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+V WD
Sbjct: 305 SVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQVVWD 364
Query: 333 EPASITRPDRVSPWEIEPFVASATPNL 359
EP + V+PW +E T NL
Sbjct: 365 EPDLLQNVKCVNPWLVELVSNMPTFNL 391
>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
[Vitis vinifera]
Length = 593
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 197/364 (54%), Gaps = 42/364 (11%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
+W+ACAG V +P RVYYFPQGH+EQ AS+ L+ PL +LCRVV +
Sbjct: 16 IWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLS---PLVFSKPSVLCRVVAVWF 70
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPD--------PCPADSPRPKVHSFSKVLTASDTS 133
+A+Q+TDEV+A+I L P E T + D KV SF K+LT+SD +
Sbjct: 71 LADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDAN 130
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A PPL+ P Q L+ DL G +W F+HI+RG PRRHLLTTGWS
Sbjct: 131 NGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGWS 190
Query: 194 TFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQ---------QSSMPSSVISSQSMHL 243
FV K+LVAGD+ VF+ R N EL +GVR AR +S++ +V + + +
Sbjct: 191 KFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEVGSI 250
Query: 244 GVLATASHA------------VATQTM-FVVYYKPR--TSQFIISLNKYLEAVNNKFAVG 288
+ +S +A Q M F V Y PR +S F++ EA++ + G
Sbjct: 251 EGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTGG 310
Query: 289 MRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 345
MR KM E EDS + F GTV V D P W+ S WR L+V WDEP + RVSP
Sbjct: 311 MRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLWRMLQVTWDEPEVLQNVMRVSP 369
Query: 346 WEIE 349
W++E
Sbjct: 370 WQVE 373
>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 690
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 192/387 (49%), Gaps = 76/387 (19%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E + + +L P R+P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 201 LVAGDTFVFLRGENGELHVGVR-------------------------------------- 222
LVAGD+ VF+R NG+L VG+R
Sbjct: 199 LVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGE 258
Query: 223 ---CLARQQSSM---PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISL 274
AR + + P V+ + ++ A + Q VVYY PR S +F +
Sbjct: 259 EDDAAARGKVRVLVRPEEVVEAANL----------AASGQPFEVVYY-PRASTPEFCVKA 307
Query: 275 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 332
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+
Sbjct: 308 GAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQ---- 363
Query: 333 EPASITRPDRVSPWEIEPFVASATPNL 359
RVSPW +E + S+TP +
Sbjct: 364 ------NVKRVSPWLVE--LVSSTPAI 382
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 639
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 613 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 668
Query: 640 GDDPWHEFCNMVKRIFI 656
GD+P+ EF +R+ I
Sbjct: 669 GDEPFSEFTKTARRLTI 685
>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
Group]
Length = 599
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 177/287 (61%), Gaps = 18/287 (6%)
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL------------DMNQST 158
C A+ H F K LTASDTSTHGGFSV R+ A +C PPL D
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVR 80
Query: 159 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 218
P+QEL+A DLHG +W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L
Sbjct: 81 PSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLR 140
Query: 219 VGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNK 276
+GVR + ++ ++S L +L++ + ++ +++F + + PR+ S+FI+ +
Sbjct: 141 LGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWR 200
Query: 277 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 335
L+++N+ F++GMR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+
Sbjct: 201 LLKSLNHPFSIGMRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDST 259
Query: 336 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 382
+ +RVSPWEIE S + + + + +KR +L LD P
Sbjct: 260 DSSHQNRVSPWEIERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 304
>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
Length = 694
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 272/644 (42%), Gaps = 107/644 (16%)
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSK 125
+P +LCRV+ I MA+ E+DEV+A++ L+P + + + ++ K SF+K
Sbjct: 100 IPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAK 159
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LT SD + GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRR
Sbjct: 160 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 219
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------------- 226
HLLTTGWS FV K+LVAGD+ VF+R E+G+L VG+R R
Sbjct: 220 HLLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGS 279
Query: 227 ----------QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYY-KPRTSQF 270
+ +S+ S S + V+ A+ A+ + VVYY + TS+F
Sbjct: 280 CGYSSLLREDESNSLRRSNCSLADRKGKVAAESVIEAATLAINGRGFEVVYYPRASTSEF 339
Query: 271 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 328
+ A+ + GMR+KM FE EDS F GTV V P W +S WR L+
Sbjct: 340 CVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLLQ 399
Query: 329 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP---------- 377
V WDEP + RV+PW +E V++ V P+ L PR M +P
Sbjct: 400 VAWDEPDLLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLIN 453
Query: 378 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 437
+ +PS S P S L + V + R + H + SD + +++R
Sbjct: 454 SIPVPSFPSNPLIRSNPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPPP 511
Query: 438 GEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET 497
+ P SQ L ID + E
Sbjct: 512 PQPSALP---LSQPLGLRNIDS----------------------------------RNEK 534
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
G G N T S S V L IS G +D A K
Sbjct: 535 GFCFLTMGTTPCNDDTESKKSHIVLFGKLILPEEQIS-------EKGSTDTANTSGGSKL 587
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-K 616
+ S KV M+ VGR LDL+ L Y+ L +L +MF I K
Sbjct: 588 SSSEEGSPCSNKAHDAAGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIQK 647
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
++ + ++Y D G + G++P+ EF +R+ I + Q
Sbjct: 648 AEMLS----SVLYRDASGAIKYAGNEPFSEFLKTARRLTIVTEQ 687
>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
Length = 392
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 177/350 (50%), Gaps = 46/350 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV +
Sbjct: 22 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVR 75
Query: 81 LMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 76 FMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDAN 135
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 136 NGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 195
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG---- 244
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 196 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 255
Query: 245 ---------------------VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVN 282
VL A+ A Q V+YY + T +F + A+
Sbjct: 256 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCVRAAAVRTAMA 315
Query: 283 NKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 330
++ GMR+KM FE EDS F GTV GV+ P W S WR L+V
Sbjct: 316 VQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVH 365
>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
gi|194699576|gb|ACF83872.1| unknown [Zea mays]
gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 373
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 180/349 (51%), Gaps = 43/349 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGG 131
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------ 243
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 244 ------------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 283
V+ AS A + Q VVYY PR S +F++ A+ N
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRN 310
Query: 284 KFAVGMRYKMRFEGEDSPERR-FSGTVVG--VEDFSPHWKDSKWRSLKV 329
++ GMR+KM FE EDS F GT+ V D + W +S WR L+V
Sbjct: 311 QWCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLLQV 358
>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 589
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 194/388 (50%), Gaps = 53/388 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAS-TNQELNQRIPLFRLPSKILCRV 76
L +LW ACAG +V +P +V+YFPQGH E + NQ R+P I CR+
Sbjct: 8 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKRVDFPKNQT----RVPPLIPCRL 63
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC---------PADSPRPKV-HSFSKV 126
+ MA+ +TDEVY ++ L P + D C D + K SF+K
Sbjct: 64 SAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQEKPPTSFAKT 123
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD + P Q ++AKD+ G W+F+HI+RG PRRH
Sbjct: 124 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIYRGTPRRH 183
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------------ 222
LLTTGWS FV KRLVAGD+ VFLR ENG+L VG+R
Sbjct: 184 LLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGWNNPLFGG 243
Query: 223 -CLARQQSSMPSSVISSQSMHLG------VLATASHAVATQTMFVVYYKPRTS--QFIIS 273
L +S++ S M +G V+ + AV + VVYY PR S +F +
Sbjct: 244 GFLCGSESNLMSG--GDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYY-PRASSPEFCVK 300
Query: 274 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 331
+ A+ ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+V W
Sbjct: 301 ASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPDSPWRLLQVVW 360
Query: 332 DEPASITRPDRVSPWEIEPFVASATPNL 359
DEP + V+PW +E T NL
Sbjct: 361 DEPDLLQNVKCVNPWLVELVSNMPTFNL 388
>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
Length = 671
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 203/411 (49%), Gaps = 60/411 (14%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
W C G +V +P +V+YFPQG+ E TN + L R+P+ ILCRV +
Sbjct: 13 FWHVCTGSMVQIPPVNSKVFYFPQGYAEH--TFTNVDFTV---LARIPAMILCRVDAVKF 67
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 141
+A+ ETDEVYA+I L+P E D ++ +P F+K LT SD + GGFSV
Sbjct: 68 LADTETDEVYAKIRLIPV----EDFEDDSVVEETEKPAF--FAKTLTQSDANNGGGFSVP 121
Query: 142 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
R A P LD P Q + AKD+HG W F+HI+RG PRRHLLT+GWS FV K+L
Sbjct: 122 RYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSGWSAFVNKKKL 181
Query: 202 VAGDTFVFLRGENGELHVGVRCLAR--------------------------QQSSMPSSV 235
VAG + VF++ EN EL VG+R + R + SS ++
Sbjct: 182 VAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFVTEDENSSTNGNL 241
Query: 236 ISSQSMHLG--------VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFA 286
IS V+ + A Q +VYY T ++ + + A++ ++
Sbjct: 242 ISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVKASSVRAAMSVQWC 301
Query: 287 VGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 344
GMR+KM FE ED S F G++ V+ P W S WR L+V WDEP + V+
Sbjct: 302 SGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTWDEPDLLQNVKSVN 361
Query: 345 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP---PLD----LPSAASAP 388
PW +E + S P++ L+ N PR + +P P D LPS + P
Sbjct: 362 PWLVE--LVSNMPDI---NLSHNSPPRKRLCLPQEFPFDGQFPLPSFSGNP 407
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 574 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 633
L ++ KV + VGR LDL+ L Y L L +MF+++ +L T+ ++Y D
Sbjct: 570 LGASTDHCKVFLDSEDVGRTLDLSVLGSYAELYKRLADMFEME-RLDMVTR--VLYLDAT 626
Query: 634 GDMMLVGDDPWHEFCNMVKRIFI 656
G +GD+P+ +F KR+ I
Sbjct: 627 GASKQIGDEPFSDFIKTAKRLTI 649
>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
Length = 622
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 205/407 (50%), Gaps = 41/407 (10%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
+W+A AG V +P G RVYYFPQGH E ++ ++ +P F ILCRV+++
Sbjct: 15 VWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTSPAVMSPGMPAF-----ILCRVLSVRF 69
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 141
+AE +TDEVYA+I L P SQ+E + ++ SF K+LT SD + GGFSV
Sbjct: 70 LAESDTDEVYARIFLHPI-SQSEVDEVTMREEEVVEDEIVSFVKILTPSDANNGGGFSVP 128
Query: 142 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
R A P LD P Q L +D+ G W F+HI+RG PRRHLLTTGWS FV SK+L
Sbjct: 129 RFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKQL 188
Query: 202 VAGDTFVFL-RGENGELHVGVRCLARQQSS---MPSSVISSQSMHLGVLATASHAVATQT 257
VAGD+ VF+ R N +L+VGVR R+ SS + + ++ G S +
Sbjct: 189 VAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINNGGSPDVSWGIRKGR 248
Query: 258 M-----------------FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
M F V PR + F++ + A+N + VGMR KM E E
Sbjct: 249 MTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVKAQEVQMALNMPWTVGMRVKMAVEAE 308
Query: 299 DSPERR-FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 356
DS + GTV V + S W+ S WR L++ W+EP +RV+PW++E F
Sbjct: 309 DSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRVNPWQVECF----- 363
Query: 357 PNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 403
P + + P +++P LP +P+ S +T L
Sbjct: 364 -----PPIPQFLPPSKKIKLPNGLLPDGERSPFPMTGLGSFPMTGLG 405
>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 551
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 200/371 (53%), Gaps = 32/371 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ACAG V +PK RVYYFPQGHME AS + L+ PL R + C V ++
Sbjct: 12 KIWRACAGAAVQIPKLHSRVYYFPQGHMEH--ASPSHYLS---PLIRSLPFVPCHVSSLD 66
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPK-------VHSFSKVLTASDT 132
+A+ +DEV+A+ L P SQ +P D A + V SF+K+LT SD
Sbjct: 67 FLADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPSDA 126
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
+ GGFSV R A C PPLD P Q L D+HG EWRF+HI+RG PRRHL TTGW
Sbjct: 127 NNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHLFTTGW 186
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS---------SVISSQSMHL 243
S FV K+LVAGDT VF++ +G + VG+R AR +++ + S ++ +
Sbjct: 187 SKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRSTTGRVTA 246
Query: 244 GVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 301
+A A+ + A F V Y PRT + F++S E++ + GMR K+ E EDS
Sbjct: 247 EAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKISMETEDSS 306
Query: 302 ERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
+ GTV + ++ WR L+V WDEP + +VSPW++E + P +
Sbjct: 307 RMTWYQGTVSS----ACASENGPWRMLQVNWDEPEVLQNAKQVSPWQVE---LVSPPFAL 359
Query: 361 QPVLAKNKRPR 371
V + NKR R
Sbjct: 360 HTVFSPNKRLR 370
>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
Length = 593
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 199/389 (51%), Gaps = 49/389 (12%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL 73
N+ L +LW+A AG V +P RVYYFPQGHM+Q A++ + L R IL
Sbjct: 12 NASSLNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQ--ATSLPNNLSPLLLSR--PYIL 67
Query: 74 CRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
C V +H +A+ +TDEV+A++ L P + + N P P D R + SF+K+LT SD
Sbjct: 68 CSVSAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGER--ISSFAKILTPSD 125
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A PPLD + P Q L+ D+HG W F+HI+RG PRRHLLTTG
Sbjct: 126 ANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTG 185
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL-----GVL 246
WS FV +K+LVAGD+ VF++ G + +G+R R + SS + S L GV
Sbjct: 186 WSKFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGVR 245
Query: 247 -------------ATASHA--------------VATQTM-FVVYYKPRT--SQFIISLNK 276
A + H +A Q M F V Y PR S F++
Sbjct: 246 SRVDDEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKAEV 305
Query: 277 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLKVQWDE 333
A++ + GMR KM E +DS F G V V V D W+ S WR L + WDE
Sbjct: 306 VDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHG-AWRGSPWRMLHITWDE 364
Query: 334 PASITRPDRVSPWEIEPFVASATPNLVQP 362
P + VSPW++E + S TP+L P
Sbjct: 365 PEVLQTSKWVSPWQVE--LLSTTPSLHTP 391
>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
gi|238015272|gb|ACR38671.1| unknown [Zea mays]
Length = 534
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 150/211 (71%), Gaps = 6/211 (2%)
Query: 164 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 223
+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 224 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 281
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120
Query: 282 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITR 339
+ + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180
Query: 340 PDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
RVS WEIEP + P P + KRP
Sbjct: 181 QPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 209
>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 739
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 150/211 (71%), Gaps = 6/211 (2%)
Query: 164 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 223
+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 224 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 281
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120
Query: 282 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITR 339
+ + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180
Query: 340 PDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
RVS WEIEP + P P + KRP
Sbjct: 181 QPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 209
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 618 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 677
Query: 649 NMVKRIFICSSQDVKKM 665
+ V I I S Q+V++M
Sbjct: 678 STVSCIKILSPQEVQQM 694
>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
Length = 155
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 116/152 (76%), Gaps = 11/152 (7%)
Query: 2 ANRLGSLSQPSSNS----------DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQL 51
ANR+ S Q NS D LY E WKACAGPLVDV K G+RVY FPQGHMEQL
Sbjct: 3 ANRV-SFGQQQQNSNFSGQGNGVKDALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQL 61
Query: 52 EASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC 111
EASTNQELNQRIP+F LP KILCRV NI L+AEQ+TDEVYAQITL+PE Q EP +PD C
Sbjct: 62 EASTNQELNQRIPMFNLPPKILCRVFNIQLLAEQDTDEVYAQITLMPEADQTEPISPDSC 121
Query: 112 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRK 143
P + P+P VHSF KVLTASDTSTHG FSVLRK
Sbjct: 122 PEEPPKPDVHSFCKVLTASDTSTHGEFSVLRK 153
>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
Length = 603
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 190/392 (48%), Gaps = 46/392 (11%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
PS++ + R +W+ACAG V +P RVYYFPQGH+EQ S++ + + L
Sbjct: 6 HPSADLRRVDRRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALS 65
Query: 70 SKIL-CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP-----------DPCPADSPR 117
++ C++ + +A+ TDEVY ++ L P S N P+ P D
Sbjct: 66 KPVIPCQISAVQFLADPVTDEVYTKLLLFPIDSFN-PSVPVLEHSGNLEQHHGYDYDDDE 124
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
K+ +F+K+LT SD + GGFSV R A PPL+ + P Q L D+HG W F+H
Sbjct: 125 DKIVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRH 184
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------- 222
I+RG PRRHLLTTGWS FV K+L+AGD+ VF+R G++ +GVR
Sbjct: 185 IYRGTPRRHLLTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCARW 244
Query: 223 -----CLARQQSSMPSSVISSQSMHLGVLATASHAV-------ATQTMFVVYYKPRT--- 267
C + V G + AV A F V Y PR
Sbjct: 245 REQIACFGGGGGDVKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYYPRAGWY 304
Query: 268 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE-DFSPHWKDSKWR 325
S F++ + A+ ++ GMR KM E EDS F GT+ W+ S WR
Sbjct: 305 SDFVVRTDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPWR 364
Query: 326 SLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
L+V WDEP + RVSPW++E +V+ + P
Sbjct: 365 MLQVAWDEPEVLQNAKRVSPWQVE-YVSPSPP 395
>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 178/339 (52%), Gaps = 38/339 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + +P+ + CRV +
Sbjct: 23 QLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAVD------LSAACVPALLPCRVSAVR 76
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
MA+ +DEV+A+I L+P +P+ + RPK SF+K LT SD + G
Sbjct: 77 FMADAHSDEVFAKIRLVPLRHGDPAVDVGDAAAQGRPQDDRPKPASFAKTLTQSDANNGG 136
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q +V +D+HG E++F+HI+RG PRRHLLTTGWS FV
Sbjct: 137 GFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTPRRHLLTTGWSNFV 196
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL---------A 247
K+L+AGD+ VFLR + GE+HVGVR R + S + G++ A
Sbjct: 197 NQKKLLAGDSIVFLRSDGGEVHVGVR---RAKRVFCDEGHSGWDHYRGLMRGGNAGSGDA 253
Query: 248 TASHAVATQTM------------FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKM 293
A V + + F V Y PR S +F + A+ ++ GMR+KM
Sbjct: 254 AAKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCVRAGAVRAAMQVQWRPGMRFKM 313
Query: 294 RFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 330
FE EDS F GTV G+ P W S WR L+V+
Sbjct: 314 AFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQVR 352
>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
Length = 375
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 188/367 (51%), Gaps = 48/367 (13%)
Query: 5 LGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIP 64
L +L + S+ LW+ACAG +V +P V YFPQGH E A N E +
Sbjct: 3 LQNLLMADNKSNCFDSRLWQACAGTMVKMPAVDSIVLYFPQGHAEH--AGVNVEFRSDV- 59
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-----PCPADSPRPK 119
++PS I CRV +I MAE+ETDEV+A+I L P TP+ +D+ R K
Sbjct: 60 --KIPSYIPCRVSSIKYMAERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSDNSR-K 116
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
SF+K LT SD + GGFSV + A P LD N + P Q L A D+HG W+F+HI+
Sbjct: 117 PLSFAKTLTQSDANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIY 176
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-------- 231
RG P RHLLTTGWSTFV K+LVAGD+ VFLR EN ++ +G+R + ++ +M
Sbjct: 177 RGTPERHLLTTGWSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWW 236
Query: 232 -PS-------------------------SVISSQSMHLGVLATASHAVATQTMFVVYYKP 265
PS S+I+ ++ + A+ F V + P
Sbjct: 237 FPSVGNLTIPRGGFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYP 296
Query: 266 R--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDS 322
+ T +F + ++ A+ + GMR+KM FE ED F GT+ V+ P W DS
Sbjct: 297 QSTTPEFFVKASRVKAALQIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWPDS 356
Query: 323 KWRSLKV 329
WR L+V
Sbjct: 357 PWRMLQV 363
>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
Length = 379
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 181/362 (50%), Gaps = 58/362 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-----ELNQRIPLFRLPSKILCR 75
+LW ACAG +V +P RVYYF QGH E + EL R LP +LCR
Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCR 71
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKV 126
V + +A++++DEVYA+I L P P + E PD CP A P P K SF+K
Sbjct: 72 VEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKT 131
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 132 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 191
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-- 244
LLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 192 LLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGG 251
Query: 245 ---------------------------------VLATASHAVATQTMFVVYYKPRTS--Q 269
V+ AS A + Q V YY PR S
Sbjct: 252 GFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PRASTPD 310
Query: 270 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPH-WKDSKWRSL 327
F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR L
Sbjct: 311 FVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLL 370
Query: 328 KV 329
+V
Sbjct: 371 QV 372
>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
Length = 360
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 169/327 (51%), Gaps = 40/327 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGG 131
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------ 243
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 244 ------------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 283
V+ AS A + Q VVYY PR S +F++ A+ N
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRN 310
Query: 284 KFAVGMRYKMRFEGEDSPERR-FSGTV 309
++ GMR+KM FE EDS F GT+
Sbjct: 311 QWCPGMRFKMAFETEDSSRISWFMGTI 337
>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
Length = 524
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 183/337 (54%), Gaps = 22/337 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
+++W+ CAG V +PK VYYFP GH+E + S N N L R ILC V +
Sbjct: 10 QKIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPNP--NTLSHLDRSRPFILCTVSAV 67
Query: 80 HLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
L+A+ TDEV+ ++ L P ++ +EP + + KV S+SK LT SD + G
Sbjct: 68 DLLADLCTDEVFVKLLLTPVTNKGVHEPHSLEVREDKDDDKKVVSYSKTLTPSDANNGGA 127
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV + A PPLD+N P QEL D+HG W+F+H++RG P RHLLTT WS FV
Sbjct: 128 FSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLTTDWSEFVD 187
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
KRLV GD+ +F++ +G + VGVR RQ ++ I+ +S A
Sbjct: 188 KKRLVGGDSLIFMKDSDGNISVGVR---RQTKFGGAAKITEKS-----FTEAVELADKNL 239
Query: 258 MFVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVVGV 312
F V Y P F++ +A+N +++G+R ++ + DS +R +F GT+ +
Sbjct: 240 AFEVVYYPTAKGWCNFVVDAKVVEDAMNISWSLGVRIELSSKNYDSSKRCSKFEGTISAL 299
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
+P + WR L+V+WDEP P+RVSPWE+E
Sbjct: 300 S--AP---NCPWRMLEVKWDEPKVSQVPERVSPWEVE 331
>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
Length = 588
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 191/367 (52%), Gaps = 35/367 (9%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
++ +LW ACAGP VP G VYYFPQGH E A+ + L+ P + CRV
Sbjct: 33 VHPQLWYACAGPTCTVPPVGTAVYYFPQGHAEHAGAAADANLHA-------PPFVPCRVA 85
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPKVHSFSKVLTA 129
+ MAE +TDE++ +I L P S EP T D P V S +K LT
Sbjct: 86 GVRFMAELDTDEIFVKIRLDPLRS-GEPLTDVGEAQVVNDEAGQRQPTRPVISSAKTLTK 144
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD+ + G SV R A P LD + P Q + A+D+HG EW F+H++RG P R+LLT
Sbjct: 145 SDSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTPERNLLT 204
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--QQSSMPSSVISSQSMHLGVLA 247
TGWS FV SK++V GD+ VFLR E+G +H+G+R R ++++ ++ + G A
Sbjct: 205 TGWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRGNASGTGAAA 264
Query: 248 TA-----------SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR 294
A F V + PR + F + + +EA+ + G+R+KM
Sbjct: 265 DGVLRAEDVVAAAVTLAAAGNPFEVVHYPRATAPAFCVRVATVIEALQVSWCPGLRFKMA 324
Query: 295 FEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 352
FE +D S F GTV GV P W S WR L+V WDEP + +R+SPW++E +
Sbjct: 325 FEAKDLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPWQVE--L 382
Query: 353 ASATPNL 359
+ PNL
Sbjct: 383 VATMPNL 389
>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
Length = 624
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 199/404 (49%), Gaps = 71/404 (17%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P++ L +W+ACAG V +P RVYYFPQGH+EQ AS+ L+ PL
Sbjct: 5 PATELRPLDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLS---PLVFSKP 59
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD--------PCPADSPRPKVHS 122
+LCRVV + +A+Q+TDEV+A+I L P E T + D KV S
Sbjct: 60 SVLCRVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMS 119
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K+LT+SD + GGFSV R A PPL+ P Q L+ DL G +W F+HI+RG
Sbjct: 120 FVKILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGT 179
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQ---------QSSMP 232
PRRHLLTTGWS FV K+LVAGD+ VF+ R N EL +GVR AR +S++
Sbjct: 180 PRRHLLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALA 239
Query: 233 SSVISSQSMHLGVLATASHAVAT------------QTM-FVVYYKPR--TSQFIISLNKY 277
+V + + + + +S Q M F V Y PR +S F++
Sbjct: 240 GAVKAKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVV 299
Query: 278 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSL------- 327
EA++ + GMR KM E EDS + F GTV V D P W+ S WR L
Sbjct: 300 EEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLWRMLQTWSYLQ 358
Query: 328 ----------------------KVQWDEPASITRPDRVSPWEIE 349
KV WDEP + RVSPW++E
Sbjct: 359 DTKMRSLIVTFFSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVE 402
>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 187/379 (49%), Gaps = 49/379 (12%)
Query: 11 PSSNSDDLYR----ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF 66
P S D++R ++W+ACAG V +P RVYY+PQGH+E S++
Sbjct: 3 PPSAIADVHRVIDPKIWRACAGASVKIPALFSRVYYYPQGHVEHCCPSSSA--------- 53
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPKVHSFS 124
S I C V +I L+A+ TDEV+A +TL P +Q++ P + KV +F+
Sbjct: 54 VTASPIACVVSSIDLLADPITDEVFAHLTLHPAAAQDQFQFPPQSRFEEEDESEKVVTFA 113
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
KVLTASD + GGFSV R A PPLD P Q+L D+HG W F+HI+RG PR
Sbjct: 114 KVLTASDANNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPR 173
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV SK+L+ GD+ VF+R E+ +GVR S SS + G
Sbjct: 174 RHLLTTGWSKFVNSKKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGG 233
Query: 245 VLAT---------------------ASHAVATQTM---FVVYYKPRT--SQFIISLNKYL 278
S A+ + F V Y P S+F++
Sbjct: 234 YYGVKKEDGGEKFRRVGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWSEFVVRAEDVE 293
Query: 279 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASI 337
+ N + G R KM E EDS F G V S ++++ W+ L++ WDEP +
Sbjct: 294 ASTNVYWTPGTRVKMAMETEDSSRITWFQGIV------SATFQET-WKQLQITWDEPEIL 346
Query: 338 TRPDRVSPWEIEPFVASAT 356
RV+PW++E AS+T
Sbjct: 347 QNLKRVNPWQVEAVTASST 365
>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
Length = 1160
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
LW CAG V++P RVYYFPQGH +Q +S + L+ PL +LCRV ++
Sbjct: 20 LWLVCAGTTVEIPTLHSRVYYFPQGHFDQ-ASSAPRNLS---PLLLSKPAVLCRVESVQF 75
Query: 82 MAEQETDEVYAQITLLP------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
+A+ TDEV+A++ L P A + V SFSKVLTASD +
Sbjct: 76 LADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTASDANNG 135
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A PPL+ P Q L+ D+HG+ W F+HI+RG PRRHLLTTGWSTF
Sbjct: 136 GGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTTGWSTF 195
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR-------QQSSMPSSVISSQSMHL----- 243
V +K+LVAGD VF++ G L VG+R R + M V +
Sbjct: 196 VNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEEEEEEEEEE 255
Query: 244 ------------GVLATASHAVATQTM-----FVVYYKP--RTSQFIISLNKYLEAVNNK 284
G L+ A A + F V Y P R S+F++ EA+
Sbjct: 256 EEVREVFSRDGRGKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVKTEAVNEAMKVA 315
Query: 285 FAVGMRYKMRFEGEDSPERRFS-GTVVGVE-DFSPHWKDSKWRSLKVQWDEPASITRPDR 342
++ G+R K+ E +DS + GTV V + W+ S WR L+V WDEP +
Sbjct: 316 WSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDEPEGLQIAKW 375
Query: 343 VSPWEIEPFVASATPNL 359
VSPW++E + S TP L
Sbjct: 376 VSPWQVE--LVSTTPAL 390
>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 131/215 (60%), Gaps = 18/215 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW+ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
WSTFV K+L+AGD+ VFLR E GEL VG+R R
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKR 215
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 259 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF 315
F V Y PR S +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 FEVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVA 349
Query: 316 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLS 373
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR
Sbjct: 350 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKK 402
Query: 374 MEVP-PLDLP 382
+ +P P D P
Sbjct: 403 LRIPQPFDFP 412
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 642 DPWHEFCNMVKRIFI---CSSQDVKK 664
+P+ +F KR+ I S +V+K
Sbjct: 652 EPFSDFMRATKRLTIKMDISGDNVRK 677
>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
Length = 703
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 129/211 (61%), Gaps = 18/211 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
WSTFV K+L+AGD+ VFLR E G+L VG+R
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIR 211
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 256 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGV 312
Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V
Sbjct: 288 QAFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAV 346
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRP 370
+ P W +S WR L+V WDEP + RVSPW +E + S P + + P P
Sbjct: 347 QVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SP 399
Query: 371 RLSMEVP-PLDLP 382
R + +P P D P
Sbjct: 400 RKKLRIPQPFDFP 412
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 642 DPWHEFCNMVKRIFI 656
+P+ +F KR+ I
Sbjct: 652 EPFSDFMRATKRLTI 666
>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
Length = 1067
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 138/212 (65%), Gaps = 10/212 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQL------EASTNQELNQRIPLF-RLPSKIL 73
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLPSKLI 103
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDT 132
C + ++L A+ +TDEVYAQ+TL P + E RP++ F K LTASDT
Sbjct: 104 CLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKQARPQMEFFCKTLTASDT 163
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSV R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGW
Sbjct: 164 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGW 223
Query: 193 STFVTSKRLVAGDTFVFLR--GENGELHVGVR 222
S FV+ KRL AGD+ + +R ++ ++ +G+R
Sbjct: 224 SLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 444 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 502
P F+Q Q+F++A+ D + P++S NND LL +TE
Sbjct: 811 PSSNFNQHQMFKDALPDVEMEGVDPSNSCLF-----GINNDNLLG---FPIETEDLLINA 862
Query: 503 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 558
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 863 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 914
Query: 559 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 618
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 915 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 973
Query: 619 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 974 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1023
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 257 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 316
++FV + +I + ++ ++ N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 224 SLFVSGKRLFAGDSVIVVRRHCDS--NQISLGMRFRMMFETEELGTRRYMGTITGISDLD 281
Query: 317 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 353
P V WDE A+ R +RVS WEIEP A
Sbjct: 282 P-----------VGWDESAAGERRNRVSIWEIEPVAA 307
>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
Length = 521
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 197/382 (51%), Gaps = 43/382 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ CAGP V+VPK +VYYFP GH+E S N + I + PS C + +
Sbjct: 12 KIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNPQTITVIDGYG-PS-FPCIITAVD 69
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L+A+ TDEV+A++ L P Q P D D K SF K LT SD++ GGFS
Sbjct: 70 LLADPHTDEVFAKLLLSPVTEGQEFPEVVDE--EDDGGDKFVSFVKTLTKSDSNNGGGFS 127
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R A P LD+N P+Q+L D+H W+F H++RG+P+RHL TTGW+ FV +K
Sbjct: 128 VPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTTGWTPFVNTK 187
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS-----------------SQSMH 242
+LVAGD+ VF++ G++ VG+R + ++ +V + S+
Sbjct: 188 KLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVKREGFSRGGR 247
Query: 243 LGVLATASHAVATQ-----TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRF 295
G+L + A + F V Y PR + F++ N +A+ +A GMR K+
Sbjct: 248 RGMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVDANVVDDAMKIGWASGMRVKLPL 307
Query: 296 EGEDSPERRFS-----GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 350
+ ++S + + GT+ V WR L+V WDE + +RV+PW++E
Sbjct: 308 KIDESSNSKMTFFQPQGTISNVSSV------PNWRMLQVNWDELEILQNQNRVNPWQVE- 360
Query: 351 FVASATPNLVQPVLAKNKRPRL 372
+ S TP + P L+ K+PRL
Sbjct: 361 -LISHTPAVHLPFLS-TKKPRL 380
>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 130/215 (60%), Gaps = 18/215 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW+ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG +F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
WSTFV K+L+AGD+ VFLR E GEL VG+R R
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKR 215
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 256 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGV 312
Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V
Sbjct: 288 QAFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAV 346
Query: 313 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRP 370
+ P W +S WR L+V WDEP + RVSPW +E + S P + + P P
Sbjct: 347 QVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SP 399
Query: 371 RLSMEVP-PLDLP 382
R + +P P D P
Sbjct: 400 RKKLRIPQPFDFP 412
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 642 DPWHEFCNMVKRIFI---CSSQDVKK 664
+P+ +F KR+ I S +V+K
Sbjct: 652 EPFSDFMRATKRLTIKMDISGDNVRK 677
>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 193/399 (48%), Gaps = 66/399 (16%)
Query: 8 LSQPSSNSDDL-YRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
+S PS+ + D+ +R+ +W+ACAG V +P RVYYFPQGH+E
Sbjct: 1 MSPPSATAGDINHRQVDPRIWRACAGASVQIPLLYSRVYYFPQGHVEHC----------- 49
Query: 63 IPLFR-LPSK---ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP---------D 109
PL LPS + C + +I L+A+ TDEV+A + L +P E TP D
Sbjct: 50 CPLISTLPSSTSPVPCLITSIQLLADPITDEVFAHLVL--QPVTQEQFTPTNYSRFGRYD 107
Query: 110 PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 169
D+ KV +F+K+LT SD + GGFSV R A PPLD P Q+L D+H
Sbjct: 108 GDVDDNN--KVTTFAKILTPSDANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIH 165
Query: 170 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------- 222
G W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF++ E+ +GVR
Sbjct: 166 GAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSS 225
Query: 223 -------------------CLARQQSSMPSSVI---SSQSMHLGVLATASHAVATQTMFV 260
+A++ + + A + A F
Sbjct: 226 GGGSSYYGGDEYNGYYSQSSVAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFE 285
Query: 261 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP 317
V Y P S+F++ +++ + G R KM E EDS F G V +
Sbjct: 286 VAYYPTAGWSEFVVRAEDVESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETG 345
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 356
W+ S W+ L++ WDEP + RV+PW++E VA+AT
Sbjct: 346 PWRGSPWKQLQITWDEPEILQNVKRVNPWQVE-IVANAT 383
>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
Length = 596
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 187/394 (47%), Gaps = 69/394 (17%)
Query: 8 LSQPSSNSDDL-YRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
+S PS+ + D+ +RE +W+ACAG V +P RVYYFPQGH+E
Sbjct: 1 MSPPSATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHC----------- 49
Query: 63 IPLFR-LPSK---ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR- 117
PL LPS + C + +I L+A+ TDEV+A + L P Q P + R
Sbjct: 50 CPLLSTLPSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQF------TPTNYSRF 103
Query: 118 ----------PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 167
KV +F+K+LT SD + GGFSV R A P L+ P Q+L D
Sbjct: 104 GRFDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTD 163
Query: 168 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR----- 222
+HG W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 164 IHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPIS 223
Query: 223 ---------------------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM- 258
+A++ P + A+ A+Q +
Sbjct: 224 SSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLP 283
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF 315
F V + P S+F++ +++ + G R KM E EDS F G V
Sbjct: 284 FEVVFYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQE 343
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
+ W+ S W+ L++ WDEP + RV+PW++E
Sbjct: 344 TGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVE 377
>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 585
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 187/394 (47%), Gaps = 69/394 (17%)
Query: 8 LSQPSSNSDDL-YRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
+S PS+ + D+ +RE +W+ACAG V +P RVYYFPQGH+E
Sbjct: 1 MSPPSATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHC----------- 49
Query: 63 IPLFR-LPSK---ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR- 117
PL LPS + C + +I L+A+ TDEV+A + L P Q P + R
Sbjct: 50 CPLLSTLPSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQF------TPTNYSRF 103
Query: 118 ----------PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 167
KV +F+K+LT SD + GGFSV R A P L+ P Q+L D
Sbjct: 104 GRFDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTD 163
Query: 168 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR----- 222
+HG W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 164 IHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPIS 223
Query: 223 ---------------------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM- 258
+A++ P + A+ A+Q +
Sbjct: 224 SSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLP 283
Query: 259 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF 315
F V + P S+F++ +++ + G R KM E EDS F G V
Sbjct: 284 FEVVFYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQE 343
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
+ W+ S W+ L++ WDEP + RV+PW++E
Sbjct: 344 TGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVE 377
>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
Length = 793
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 132/206 (64%), Gaps = 8/206 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL-CRV 76
L ++LW+ACAG +V +P G ++ YFPQGH EQ +S + P P+ + CRV
Sbjct: 38 LDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASSPD------FPRALGPAGTVPCRV 91
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+++ +A++ETDEV+A + L PE +E P+ SP K SF+K LT SD + G
Sbjct: 92 LSVKFLADKETDEVFASLRLHPESGSDEDNDRAAAPSPSPE-KPASFAKTLTQSDANNGG 150
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 151 GFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 210
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR 222
K+LVAGD VFLR +GEL VGVR
Sbjct: 211 NHKKLVAGDAIVFLRSNSGELCVGVR 236
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 245 VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
VL A+ A + + VVYY + T++F + A+++ + GMR+KM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRI 370
Query: 304 R-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
F GT+ V+ P W S WR L+V WDEP + RVSPW++E LV
Sbjct: 371 SWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE---------LVS 421
Query: 362 PVLAKNKRPRLSMEVPPLDLP 382
L M++PP LP
Sbjct: 422 T---------LPMQLPPFSLP 433
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 540 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 599
DS D+ KKQ V S K+ + + S S+ +V M+ V R LDL++
Sbjct: 632 GDSGHGGDVGGSKWLKKQASVLSSEKKDRLEGSSSDEESSQCRVFMESGDVKRTLDLSSF 691
Query: 600 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
YD L +L +F + + +VY D EG + G +P+
Sbjct: 692 GSYDELYKQLAAVFCVD---VAKISGRVVYKDSEGSTIHTGGEPY 733
>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
Length = 585
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 189/390 (48%), Gaps = 61/390 (15%)
Query: 8 LSQPSSNSDDL-YRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
+S PS+ + D+ +RE +W+ACAG V +P RVYYFPQGH+E
Sbjct: 1 MSPPSATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHC----------- 49
Query: 63 IPLFR-LPSK---ILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTP------DPC 111
PL LPS + C + +I L+A+ TDEV+A + L P Q PT D
Sbjct: 50 CPLLSTLPSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGD 109
Query: 112 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 171
D+ KV +F+K+LT SD + GGFSV R A P L+ P Q+L D+HG
Sbjct: 110 VDDNN--KVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGA 167
Query: 172 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------- 222
W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 168 VWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDG 227
Query: 223 -----------------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVY 262
+A++ P + A+ A+Q + F V
Sbjct: 228 GSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVV 287
Query: 263 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHW 319
+ P S+F++ +++ + G R KM E EDS F G V + W
Sbjct: 288 FYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPW 347
Query: 320 KDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
+ S W+ L++ WDEP + RV+PW++E
Sbjct: 348 RGSPWKQLQITWDEPEILQNVKRVNPWQVE 377
>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
Length = 695
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 185/382 (48%), Gaps = 54/382 (14%)
Query: 4 RLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
R G+ ++P D++ LW+ACAG + VP G VYYFPQGH E + ++ R+
Sbjct: 34 RRGAAAEPRGRDVDVHPRLWQACAGSMRAVPPVGAAVYYFPQGHAEH---AGGAAVDLRV 90
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPR-- 117
P F + CRV + LMA+ +TD+VYA+I L+P EP + S R
Sbjct: 91 PPF-----VPCRVAAVRLMADPDTDDVYARIRLVPLRAWEPVADVGDAALVKTDGSSRGG 145
Query: 118 ----------------PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 161
P+ SF+K LT SD + GGFSV R A P LD + S P Q
Sbjct: 146 ADGDGDGDAGGGQQQQPRPLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQ 205
Query: 162 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 221
+ A+D+HG EW F+HI+R PRR LL G +KR VF R G + GV
Sbjct: 206 FVSARDVHGVEWTFRHIYRSTPRRTLLNPG-CRLRRAKR-------VFCRRGGGGSNAGV 257
Query: 222 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 279
+P+ V+ A A A Q VV+Y PR S +F++ E
Sbjct: 258 AVAGPSDGKVPAE---------DVVEAARLAAAGQPFEVVHY-PRASAPEFVVRAAAVKE 307
Query: 280 AVNNKFAVGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 337
++ + G+R+KM FE ED S F GT+ GVE P W S WR L+V WDEP +
Sbjct: 308 SMQAPWCPGLRFKMAFETEDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELL 367
Query: 338 TRPDRVSPWEIEPFVASATPNL 359
+RV PW +E + S+ P L
Sbjct: 368 RNVNRVCPWRVE--LVSSMPKL 387
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Query: 537 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 596
S+ +D G SD++ KK S S + KV ++ +GR LDL
Sbjct: 569 SSTSDRSG-SDVSHGSPAKKNSPSLTLWWSGDSSLSAFALEPGQCKVFVESDTLGRNLDL 627
Query: 597 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+ L ++ L L F I + + +VY G++ VGD+P+ F +RI I
Sbjct: 628 SALSSFEELCARLSSFFGIN---NADLRSHMVYRTIAGEVKHVGDEPFSVFVKSARRITI 684
Query: 657 CS 658
+
Sbjct: 685 LT 686
>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
Length = 752
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL-CRV 76
L ++LW+ACAG +V +P G ++ YFPQGH EQ +S + P P+ + CRV
Sbjct: 38 LDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASSPD------FPRALGPAGTVPCRV 91
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-KVHSFSKVLTASDTSTH 135
+++ +A++ETDEV+A + L PE +E D A SP P K SF+K LT SD +
Sbjct: 92 LSVKFLADKETDEVFASLRLHPESGSDEDN--DRAAALSPSPEKPASFAKTLTQSDANNG 149
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 150 GGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTF 209
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR 222
V K+LVAGD VFLR +GEL VGVR
Sbjct: 210 VNHKKLVAGDAIVFLRSNSGELCVGVR 236
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 245 VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
VL A+ A + + VVYY + T++F + A+++ + GMR+KM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRI 370
Query: 304 R-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
F GT+ V+ P W S WR L+V WDEP + RVSPW++E + S P
Sbjct: 371 SWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE--LVSTLP---- 424
Query: 362 PVLAKNKRPRLSMEVPPLDLP 382
M++PP LP
Sbjct: 425 ------------MQLPPFSLP 433
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 540 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 599
+S D+ KKQ V K+ + + S S+ +V M+ V R LDL++
Sbjct: 632 GESGHGGDVGGSKWLKKQASVLSWEKKDRLEGSSSDEESSQCRVFMESGDVKRTLDLSSF 691
Query: 600 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS- 658
YD L +L +F + + +VY D EG + G +P+ F V+R+ I +
Sbjct: 692 GSYDELYKQLATVFCVD---MAKISGRVVYKDSEGSTIHTGGEPYANFVKSVRRLTILAD 748
Query: 659 SQD 661
+QD
Sbjct: 749 TQD 751
>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 180/365 (49%), Gaps = 33/365 (9%)
Query: 8 LSQPSSNSDDLYRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S P S + D RE +W+ACAG V +P RVYYFPQGH+E S+ I
Sbjct: 1 MSPPPSATADFLREVDPQIWRACAGASVQIPSLYSRVYYFPQGHVEHSCPSS------LI 54
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTT--------PDPCPAD 114
F + + C V + L+A+ TDEV+A + L P P P+ D ++
Sbjct: 55 SSFSTAAPVPCVVSAVELLADPITDEVFAHLALQPISPEHFSPSNFSGFGSDDDDDNNSN 114
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
S + KV +F+K+LT SD + GGFSV R A PPLD + P Q+L D+HG W
Sbjct: 115 SNKNKVVTFAKILTPSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWD 174
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR---CLARQQSSM 231
F+HI+RG PRRHLLTTGWS FV K+L+AGD+ VF+R E+ +GVR
Sbjct: 175 FRHIYRGTPRRHLLTTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPISNHGDEYY 234
Query: 232 PSSVISSQSMHLGVLA------TASHAVATQTMFVVYYKPRT-SQFIISLNKYLEAVNNK 284
+ + +G L + AV VVYY S F++ +
Sbjct: 235 GGGKKGFRRIGMGKLTAEAVSEAVNKAVQGYPFEVVYYPTAGWSDFVVRAEDVEVFMAGY 294
Query: 285 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 344
++ G R KM E EDS + VV S + W+ L++ WDEP + RV+
Sbjct: 295 WSPGTRVKMAMETEDSSRVTWFQGVVS----STFQETGLWKQLQITWDEPEILQNLKRVN 350
Query: 345 PWEIE 349
PW++E
Sbjct: 351 PWQVE 355
>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
Length = 241
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 132/207 (63%), Gaps = 10/207 (4%)
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------H 121
+ CRVV+++L A+ DEVYAQ+ L+P+ Q E D AD+ + H
Sbjct: 30 VFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADTEEEDLEGAGKSTTPH 89
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RG
Sbjct: 90 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGMGWKFRHIYRG 149
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLLTTGWS FV K+LV+GD +FLR +GEL +GVR A+ ++ SQ +
Sbjct: 150 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSNYLAPYSQLL 209
Query: 242 HLGVLATASHAVATQTMFVVYYKPRTS 268
++ + +A++++ F + Y PR S
Sbjct: 210 NVSGIVDVVNAISSRNAFNICYNPRAS 236
>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 614
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 128/161 (79%), Gaps = 9/161 (5%)
Query: 222 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 279
R RQ S++PSSVISS SMHLGVLATA HA+ T++MF VYYKPRTS +FII ++Y+E
Sbjct: 38 RRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYME 97
Query: 280 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR 339
+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ W +S WRSLKV+WDEP++I R
Sbjct: 98 SVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPR 157
Query: 340 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVPPL 379
PDRVSPW+IEP AS+ P V P+ L++ KRPR + VPP+
Sbjct: 158 PDRVSPWKIEP--ASSPP--VNPLPLSRVKRPRPN--VPPV 192
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 15/191 (7%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAA---------DSDG 544
K G+ ++FG ++ T+SAPS + + ++ T ++A+ D
Sbjct: 401 KAREGSGFKIFGFKV---DTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIP 457
Query: 545 KSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTLVGY 602
+ ++ + ++ +Q +P S+ QS S RS TKV QGVA+GR++DL+ Y
Sbjct: 458 ELSVSTAGTTENEKSIQQAPNSSKDVQSKSHGASTRSCTKVHKQGVALGRSVDLSKFGDY 517
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
D L EL+ MF+ G+L + + W+IVYTD EGDMMLVGDDPW EFC++V++IFI + ++
Sbjct: 518 DELTAELDRMFEFGGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKEE 577
Query: 662 VKKMSPGSKLP 672
V+KM+ S P
Sbjct: 578 VQKMNSKSSTP 588
>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 716
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 131/210 (62%), Gaps = 9/210 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E +A+ + + RIP I CRV+ +
Sbjct: 11 QLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIPPL-----IPCRVLAVK 65
Query: 81 LMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A + ++P P+ + E +++ K SF+K LT SD + G
Sbjct: 66 FLADLETDEVFANVRMVPLPNSDLNFEEEGGFGSSGSENNMEKPASFAKTLTQSDANNGG 125
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 126 GFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 185
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
K+LVAGD+ VFLR +NG+L VG+R R
Sbjct: 186 NQKKLVAGDSIVFLRSKNGDLCVGIRRAKR 215
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 194/447 (43%), Gaps = 62/447 (13%)
Query: 245 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
V+ A+ A + Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS
Sbjct: 278 VMEAAALAASGQPFEVVYY-PRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSR 336
Query: 303 RR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
F GT+ V+ P W +S WR L+V WDEP + RVSPW +E + S P ++
Sbjct: 337 ISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMP-VI 393
Query: 361 QPVLAKNKRPRLSMEVPPL-DLPSAASAPWSARLAQSHNL---TQLSVTAEDKRIDNHVA 416
Q L+ PR +P D P + P S+ + S+ L + + +++ + A
Sbjct: 394 Q--LSPFSPPRKKFRLPQHPDFPLDSQFPLSSSFS-SNTLRPSSPMCCLSDNTSVGIQGA 450
Query: 417 WHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPH 476
H + S+ + ++ Q + ++ F ++ ++ D+++ S+
Sbjct: 451 RHTQFGISLSDFHLNNKLQLGLVPSSFQQIDFHSRISNRSVTDHRDSSS----------- 499
Query: 477 PSKPNNDTLLEQVE-TGRKTETGTSCR-----LFGIELINH---ATSSAPSEKVPVSSLT 527
+N ++L+ E TG K E S + LFG ++ SS+ + P + +
Sbjct: 500 ----HNSSVLQNGEKTGPKLERSDSVKKHQFLLFGQPILTEQQITCSSSSDIRSPPTEKS 555
Query: 528 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES--------QSKQSC-LTSNR 578
+ + + + G + FK+ QVSP +S Q Q+ L +
Sbjct: 556 SSDVNLERVKFLSHGSGST-----FKQ------QVSPNKSPGVGFPWYQGYQATELGLDI 604
Query: 579 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 638
KV M+ VGR L+L+ + Y+ L L MF G ++Y D G +
Sbjct: 605 GHCKVFMESEDVGRTLNLSVISSYEELYRRLANMF---GMEKPDILSHVLYQDATGAVKQ 661
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM 665
GD P+ +F +R+ I + K+
Sbjct: 662 AGDKPFSDFIKTARRLTILTDSGSDKL 688
>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
gi|224030297|gb|ACN34224.1| unknown [Zea mays]
gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
Length = 513
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 183/377 (48%), Gaps = 45/377 (11%)
Query: 8 LSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF 66
L P++N D + R++W ACA PL +P G VYYFP GH EQ A L
Sbjct: 7 LHLPAANGDSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPAHLPAPLPA----- 61
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP-------SQNEPTTPDPCPADSPRPK 119
P C V + L A+ ET+EV+A+I+L P P + +PT+ D P +
Sbjct: 62 --PHLFPCTVAGVSLGADDETNEVFAKISLSPGPHRGPAAACRTDPTS------DCPPQE 113
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
+ F+K LT SD + GGFSV R A P LD + + P Q+L +D G W+F+HI+
Sbjct: 114 LSYFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIY 173
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP-----SS 234
RG PRRHLLTTGWS FV +K LVAGD VF+R NG+L VG+R R P +
Sbjct: 174 RGTPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAG 233
Query: 235 VISSQSMHLGVLA--------TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNK 284
V Q A A+ A F V Y PR +FI+ ++ + +
Sbjct: 234 VDPDQPPPRNARARVPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATR 293
Query: 285 FAVGMRYKMR-FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE--PASITRPD 341
+ G + +M+ E ED+ RR V + + WR+L++ WD+ P S
Sbjct: 294 WEPGAQVRMQVMEAEDT--RR----TVWADGHVKSLHQNIWRALEIDWDDSSPLSPNLSR 347
Query: 342 RVSPWEIEPFVASATPN 358
V+ W++E PN
Sbjct: 348 FVNAWQVELVTHPPLPN 364
>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 545
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 189/368 (51%), Gaps = 32/368 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ACAG V +PK RVYYFPQGH+E AS + LN PL R + C V ++
Sbjct: 12 KIWRACAGAAVQIPKLHSRVYYFPQGHLEH--ASPSHYLN---PLLRSLPFVPCHVSSLD 66
Query: 81 LMAEQETDEVYAQITLLP---EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+A+ +DEV+A+ L P +P N+ T V SFSK+LT SD + GG
Sbjct: 67 FLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDRENGVVSFSKILTPSDANNGGG 126
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R A PPLD P+ + +HI+RG PRRHL TTGWS FV
Sbjct: 127 FSVPRYCADSWFPPLDFXXXXPSSPVATSR---RRVALRHIYRGTPRRHLFTTGWSKFVN 183
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----------SVISSQSMHLGVL 246
K+LVAGDT VF++ +G + VG+R AR +++ + S ++ + +
Sbjct: 184 HKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSATGRVTAEAV 243
Query: 247 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
A A+ + A F V Y PRT + F++S E++ + GMR K+ E EDS
Sbjct: 244 AAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKIAMETEDSSRMT 303
Query: 305 -FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
F GTV + ++ WR L+V WDEP + RVSPW++E + P + V
Sbjct: 304 WFQGTVSS----ACASENGPWRMLQVNWDEPEVLQNAKRVSPWQVE---LVSLPFALHTV 356
Query: 364 LAKNKRPR 371
+ NKR R
Sbjct: 357 YSPNKRLR 364
>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
Length = 460
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 180/347 (51%), Gaps = 20/347 (5%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RE+W+ AGP +PK +V+YFP GH+E S N E I +R I C V ++
Sbjct: 11 REIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLINSYR--PIIPCVVSDV 68
Query: 80 HLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
L+A+ +TDEV+A++ L P S +EP P+ + ++ K LT SD + G
Sbjct: 69 DLLADLQTDEVFAKLILTPITNDSVHEPQEPEVRENEHGGDRLVFSGKTLTQSDANNGGA 128
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV + A PPLD+ P+Q L KD+H + W F+H +RG P+RHL+TT WS FV
Sbjct: 129 FSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLITTKWSKFVD 188
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+K+++ GD+ V ++ + + R+ ++ I+ +S V+ A A T
Sbjct: 189 TKKIIGGDSLVLMKISKDKDKDKIFIGIRRHKLSAAAKITEKS----VMEAAELADKNMT 244
Query: 258 MFVVYYKPRTSQ---FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR--FSGTVVGV 312
V+YY P S F++ +A+ + GMR K + ++S +R F GTV +
Sbjct: 245 FEVIYY-PTASHWCNFVVDAEAVKKAMQINWQSGMRVKHCLKTDESSKRSSIFQGTVSAL 303
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
D S H WR L+V WDE P +VSPW+IE + S TP L
Sbjct: 304 SDPSHH----PWRMLQVNWDESEVSQNPSQVSPWQIE--LISHTPAL 344
>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
Length = 550
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 181/366 (49%), Gaps = 44/366 (12%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL-CRVVNIH 80
LW+A +G + G VYYF QGH+EQ A+ L++ + L + I C V
Sbjct: 6 LWRAFSGNSAHIHTVGSEVYYFVQGHLEQ--ATYVPTLSRSV----LSNPITKCIVSAAD 59
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDP---CP-ADSPRPKVHSFSKVLTASDTSTH 135
A+ +DEV ++ L P P Q+ P C + R ++ F+KVLT+SD +
Sbjct: 60 YTADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLTSSDANNG 119
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLLTTGWS F
Sbjct: 120 GGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTGWSKF 179
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR-----------------------CLARQQSSMP 232
V +K+L+AGD +F R + ++ VG+R C ++ S
Sbjct: 180 VNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNVEEKRSGD 239
Query: 233 SSVISSQSMHLG-----VLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKF 285
S ++G +ATA+ A F V Y PR TS+F+I K ++N ++
Sbjct: 240 RSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEKVNNSLNYQW 299
Query: 286 AVGMRYKMRFEGEDSPERR-FSGTVVGVE-DFSPHWKDSKWRSLKVQWDEPASITRPDRV 343
G+R KM E EDS + + + GTV WK S WR L+V W+E ++ V
Sbjct: 300 YPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDALQSAKFV 359
Query: 344 SPWEIE 349
SPWE+E
Sbjct: 360 SPWEVE 365
>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
Length = 622
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 181/363 (49%), Gaps = 52/363 (14%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
+P D++ +LW+ACAG + VP G YYFPQGH EQ A+ + L +P
Sbjct: 24 EPEDKGRDVHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAAVD--------LRVVP 75
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
+ CRV + LMAE +TD++YA+I L+P L
Sbjct: 76 PFVACRVAAVRLMAEPDTDDIYAKIRLVP----------------------------LRP 107
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL-VAKDLHGYEWRFKHIFRGQPRRHLL 188
+ T G ++L + + + + L AK L +W F+H++RG P RHL+
Sbjct: 108 WEPVTDVGDALLGEGSRGGDGDGQQRRRRRPRPLSFAKTLTQSDWTFRHVYRGNPPRHLI 167
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----QQSSMPSSVISSQSMHL- 243
T GWS FV +K+L+ GD+ VF+R E+G++H+G+R R + + ++ S
Sbjct: 168 TAGWSNFVHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAVAGPSDGKV 227
Query: 244 ---GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGE 298
V+ A A A Q VV+Y PR S +F + + E++ + + G+R+KM FE E
Sbjct: 228 PAEDVVEAARLAAAGQPFEVVHY-PRASAPEFCVRADAVKESMRSPWCPGLRFKMAFETE 286
Query: 299 D-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 356
D S F GT+ GVE P W S WR L+V WDEP + RV PW +E + S+
Sbjct: 287 DLSRISWFMGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVE--LVSSM 344
Query: 357 PNL 359
PNL
Sbjct: 345 PNL 347
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 580 RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLV 639
+ KV ++ +GR LDL+ L + L L MF I R+ +VY G++ +
Sbjct: 533 QCKVFVESETLGRNLDLSALGSLEELCARLSSMFGISNNAELRS--HMVYRTISGEVKHI 590
Query: 640 GDDPWHEFCNMVKRIFI 656
GD+P+ F +RI I
Sbjct: 591 GDEPFSVFVKSARRITI 607
>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
Length = 518
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 185/376 (49%), Gaps = 47/376 (12%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA PL +P G VYYFP GH EQ A L IP P C V N+
Sbjct: 16 RDVWLACAVPLSRLPTVGAEVYYFPHGHAEQCPA----HLPAPIPA---PHLFPCIVTNL 68
Query: 80 HLMAEQETDEVYAQITLLPEP-----SQNEPTTPDPCP------ADSP---RPK-VHSFS 124
L A+ +T+EV+A+I+L P P + + PDP +DSP +P+ + F+
Sbjct: 69 TLGADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPPHPQPQELSYFT 128
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LT SD + GGFSV R A P LD + P Q LV +D G W+F+HI+RG PR
Sbjct: 129 KELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRGTPR 188
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--------------QQSS 230
RHLLTTGWS FV +K LVAGD VF+R NG+L VG+R R Q
Sbjct: 189 RHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFPGADANANANQDQ 248
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVG 288
P + + + A+ A F V Y PR +F++ ++ A+ ++ G
Sbjct: 249 QPPPRNARARVPPQDVMEAARLAAEGRPFTVTYFPRQAAGEFVVPRDEVERALATRWEPG 308
Query: 289 MRYKMR-FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSP 345
+M+ E ED+ RR V + + WR+L++ WD+ P S+ V+
Sbjct: 309 TEVRMQVMEAEDT--RR----TVWADGHVKALHQNIWRALEIDWDDSSPLSLKLSRFVNA 362
Query: 346 WEIEPFVASATPNLVQ 361
W+++ PN V+
Sbjct: 363 WQVQLVAYPPLPNTVR 378
>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
Length = 502
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 169/336 (50%), Gaps = 22/336 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA PL +P G +VYYFP GH EQ + L P C V +
Sbjct: 13 RDVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAPLPH-------PHLFPCTVAAV 65
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ TDE +A I+L+P P + P + P ++K LT SD + GGFS
Sbjct: 66 ALSADPSTDEPFATISLVPGPHR---ALGGGAPHHAVDPAFAHYAKQLTQSDANNGGGFS 122
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R A P LD + P Q L +DL G W F+HI+RG PRRHLLTTGWS FV +K
Sbjct: 123 VPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLLTTGWSRFVNAK 182
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMHLGV--LATASHAVATQ 256
LVAGD VF+R +GEL GVR R S P+ + + + A+ A
Sbjct: 183 LLVAGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVPAQEVEDAARRAAQG 242
Query: 257 TMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 314
F V Y PR +F++ + +A+ + + G + +M+F PE R S + GV
Sbjct: 243 APFTVTYYPRQGAGEFVVPRKEVEDALISPWEPGTQVRMQFL---HPEDRRSEWINGVVR 299
Query: 315 FSPHWKDSKWRSLKVQWDEPASITRPDR-VSPWEIE 349
H S WR L++ WDE A + +R V+ W+++
Sbjct: 300 AVDH---SIWRMLEIDWDESAPPSLKNRHVNAWQVQ 332
>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 169/343 (49%), Gaps = 33/343 (9%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA PL VP G +VYYFP GH EQ + P C V +
Sbjct: 25 RDVWLACATPLSRVPVVGSQVYYFPHGHSEQCPTPPRAPAHNLFP---------CTVAAV 75
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSF---SKVLTASDTSTHG 136
L A+ +TDE +A ++L+P P + PD A + RP+ +F +K LT SD + G
Sbjct: 76 RLFADPKTDEPFATVSLVPGPHRA--PAPDLPHASARRPEPTAFRYYAKQLTQSDANNGG 133
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A PPLD P Q L D G W F+HI+RG PRRHLLTTGWS FV
Sbjct: 134 GFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSKFV 193
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPSSVISSQSMHLGVLATASH 251
+K LVAGD VF+R +GEL G+R R QQ + + + A
Sbjct: 194 NAKLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQEVDDAVR 253
Query: 252 AVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR---FS 306
A F V Y PR +F++ + EA+ + G++ +M+F D+ ERR +
Sbjct: 254 LAAEGAPFTVTYYPRQGAGEFVVPKQEVEEALVGAWRPGVQVRMKF--LDAEERRSEWIN 311
Query: 307 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
G V V+ + WR L++ W E + + V+ W++E
Sbjct: 312 GVVKAVD-------PNIWRMLEINWAESVAGSLNRYVNAWQVE 347
>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
Length = 342
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 191/362 (52%), Gaps = 66/362 (18%)
Query: 329 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 388
VQWDEP+SI RPD+VS WE+EP VAS P QP +NKRPR P LPS S+P
Sbjct: 1 VQWDEPSSILRPDKVSAWELEPLVAS-NPLSTQPT-QRNKRPR------PTVLPS--SSP 50
Query: 389 WSARLAQSHNLTQLSV--TAEDKRIDNHVAWHHKHSDFSSNS------NFMSRTQSDGEW 440
+ L + S AE +R + K S +SNS + + S+ W
Sbjct: 51 DATVLGGWKPTVESSTFSYAEPQR-GRDLYSSPKFSTAASNSLGFNANSSLGAVSSNNYW 109
Query: 441 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 500
+ RV +NI +H + P VE + + G
Sbjct: 110 CNTNRV--------------ENIMDPSSHGANREP-------------VEKKQNSRNG-- 140
Query: 501 CRLFGIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDG------KSDIAKEF 552
CRLFGI+L+ ++ E PVS+ + E ++ I + +SDI
Sbjct: 141 CRLFGIQLLGNSNV---DEASPVSTPKMGGEDRLVPPIDTDFEQHSEPSNIHRSDIPS-I 196
Query: 553 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 612
+ +SP ESQS+Q RS TKV MQG+AVGRA+DLT YD L+ +LEEM
Sbjct: 197 SCDADKSCLISPLESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEM 251
Query: 613 FDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
FDI+G+L + KW++VYTDDE DMMLVGDDPW+EFC+MV++IFI ++++VK++SP KL
Sbjct: 252 FDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEVKRLSPKIKL 311
Query: 672 PM 673
P+
Sbjct: 312 PL 313
>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 192
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 103/141 (73%), Gaps = 4/141 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + + LP KILC
Sbjct: 37 DGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCE 96
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASD 131
V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASD
Sbjct: 97 VMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPL 152
TSTHGGFSVLR+HA ECLPPL
Sbjct: 157 TSTHGGFSVLRRHADECLPPL 177
>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 122/215 (56%), Gaps = 11/215 (5%)
Query: 23 WKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLM 82
W+ACAG V +P RVYYFPQGH EQ +ST L I C++ + +
Sbjct: 1 WRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAPHPPFLTNLALSKPSIPCQISAVDFL 60
Query: 83 AEQETDEVYAQITLLP--EPSQNEPTT-PDPC--------PADSPRPKVHSFSKVLTASD 131
A+ TDEV+ ++ L+P P N P + +PC D K+ +FSK+LT SD
Sbjct: 61 ADPVTDEVFTRLLLIPLDNPFSNLPLSFLEPCRSEGEGANDVDDDERKILAFSKILTPSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
WS FV +K+L+AGD+ VF+R GE+ +GVR R
Sbjct: 181 WSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215
>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 114/166 (68%), Gaps = 2/166 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YF QGH EQ+ ASTN+E++ RIP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185
>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 124/218 (56%), Gaps = 15/218 (6%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
+W+ACAG V +P RVYYFPQGH+EQ +ST L I C++ +
Sbjct: 1 IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPLISCQISAVDF 60
Query: 82 MAEQETDEVYAQITLLP-------------EPSQNEPTTPDPCPADSPRPKVHSFSKVLT 128
+A+ TDEV+ ++ LLP EPS++E + D K+ +F+K+LT
Sbjct: 61 LADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVND--VDDDENKILAFAKILT 118
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLL
Sbjct: 119 PSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTPRRHLL 178
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
TTGWS FV +K+L+AGD+ VF+R GE+ +GVR R
Sbjct: 179 TTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216
>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
Length = 630
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 174/400 (43%), Gaps = 116/400 (29%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRV---- 74
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
A + + +P +E F+K+
Sbjct: 75 -----------AGVRFMADPDTDE-----------------VFAKI-------------- 92
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
+ PT ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 93 ---------------RLVPT--VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKK 135
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ---------------SMHL-- 243
LVAGD+ VF+R ENG+L VG+R + P + SM L
Sbjct: 136 LVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRG 195
Query: 244 ----------------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 279
V+ A+ AV+ Q VVYY PR S +F +
Sbjct: 196 DDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PRASTPEFCVKAGAVRA 254
Query: 280 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 337
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V WDEP +
Sbjct: 255 AMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLL 314
Query: 338 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 377
RVSPW +E N+ LA PR + VP
Sbjct: 315 QNVKRVSPWLVE-----LVSNMPAIHLAPFSPPRKKLCVP 349
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 640
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G + G
Sbjct: 548 KVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHTG 603
Query: 641 DDPWHEFCNMVKRIFICS 658
D+P+ EF +R+ I +
Sbjct: 604 DEPFSEFTKTARRLNILT 621
>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
Length = 652
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 169/373 (45%), Gaps = 71/373 (19%)
Query: 31 VDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR-LPSK---ILCRVVNIHLMAEQE 86
V +P RVYYFPQGH+E PL LPS + C + +I L+A+
Sbjct: 26 VQIPVLHSRVYYFPQGHVEHC-----------CPLLSTLPSSTSPVPCIITSIQLLADPV 74
Query: 87 TDEVYAQITLLPEPSQNEPTTPDPCPADSPR-----------PKVHSFSKVLTASDTSTH 135
TDEV+A + L P Q P + R KV +F+K+LT SD +
Sbjct: 75 TDEVFAHLILQPMTQQQF------TPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNG 128
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P L+ P Q+L D+HG W F+HI+RG PRRHLLTTGWS F
Sbjct: 129 GGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKF 188
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CLARQQS 229
V SK+L+AGD+ VF+R E+ +GVR +A++
Sbjct: 189 VNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDD 248
Query: 230 SMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT--SQFIISLNKYLEAVNNK 284
P + A+ A+Q + F V + P S+F++ +++
Sbjct: 249 GSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMY 308
Query: 285 FAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKV-------QWDEPAS 336
+ G R KM E EDS F G V + W+ S W+ L+V WDEP
Sbjct: 309 WTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITWDEPEI 368
Query: 337 ITRPDRVSPWEIE 349
+ RV+PW++E
Sbjct: 369 LQNVKRVNPWQVE 381
>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
Length = 525
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 171/344 (49%), Gaps = 29/344 (8%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ T E YA I+LLP P A++ + ++K LT SD + GGF
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEFRYYAKQLTQSDANNGGGF 139
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P L+++ P Q L DL G W F+HI+RG PRRHLLTTGWS FV +
Sbjct: 140 SVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKFVNA 199
Query: 199 KRLVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
K+LVAGDT VF+ +L VGVR AR S+ + + + A A
Sbjct: 200 KQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARGRVQPQEVMEAVRLAA 257
Query: 255 TQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR-FEGEDSPERRFS---GT 308
Q F V Y PR +F++ + + + + GM+ + + E ED+ RR + GT
Sbjct: 258 EQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRLAWLNGT 315
Query: 309 VVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 350
+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 316 LTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 353
>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 529
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 171/348 (49%), Gaps = 33/348 (9%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 80 HLMAEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
L A+ T E YA I+LLP P A++ + ++K LT SD +
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANN 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P L+++ P Q L DL G W F+HI+RG PRRHLLTTGWS
Sbjct: 140 GGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSK 199
Query: 195 FVTSKRLVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
FV +K+LVAGDT VF+ +L VGVR AR S+ + + + A
Sbjct: 200 FVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARGRVQPQEVMEAV 257
Query: 251 HAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR-FEGEDSPERRFS- 306
A Q F V Y PR +F++ + + + + GM+ + + E ED+ RR +
Sbjct: 258 RLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRLAW 315
Query: 307 --GTVVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 350
GT+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 316 LNGTLTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 357
>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
gi|224031343|gb|ACN34747.1| unknown [Zea mays]
gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
Length = 462
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 160/335 (47%), Gaps = 38/335 (11%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA PL +P G VYYFP GH EQ A L P C V +I
Sbjct: 20 RDVWLACAAPLSRLPTVGDDVYYFPDGHAEQCPAHLPAPLPA-------PHFFPCTVTDI 72
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS-KVLTASDTSTHGGF 138
L A+ +TDEV+A+I+L P + PDP ++SP + S+S K L+ SD + G F
Sbjct: 73 SLGADDKTDEVFAKISL--RPGLAAASRPDPGSSNSPPREPLSYSIKELSQSDANGGGSF 130
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
V R P +D P Q LV D G +W F+H++R + RH+LTTGWS FV +
Sbjct: 131 CVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHVLTTGWSKFVNA 190
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV------------- 245
K LVAGD VF+R NG+L VG+R + R ++ +
Sbjct: 191 KLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQPPPPPPRNALARV 250
Query: 246 ----LATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRF-EGE 298
+ A+ A F V Y PR + +F++ N+ ++ + G M+F E E
Sbjct: 251 PPKDVMEAARLAAEGRPFTVTYYPRKAAGEFVVPRNEVEGVLDTLWEPGSHVLMQFAEAE 310
Query: 299 DSPERRFS-GTVVGVEDFSPHWKDSKWRSLKVQWD 332
D+ ++ G V + H K WR+L++ WD
Sbjct: 311 DTRRTMWADGHVKAI-----HQK--IWRALEIDWD 338
>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
Length = 207
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 113/195 (57%), Gaps = 8/195 (4%)
Query: 30 LVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDE 89
+V +P+ +V+YFPQGH E N +IP F I CRV +I MA ETDE
Sbjct: 1 MVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF-----IPCRVEDIRYMANHETDE 55
Query: 90 VYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHAT 146
VYA++ L+P D + K SF+K LT SD + GGFS R A
Sbjct: 56 VYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGFSCPRYCAE 115
Query: 147 ECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDT 206
P +D + + P Q + KD+HG +W F+H++RG P+RHLLTTGWS FV+ K+L +GD+
Sbjct: 116 MIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASGDS 175
Query: 207 FVFLRGENGELHVGV 221
VFLR ENGEL VG+
Sbjct: 176 VVFLRSENGELRVGI 190
>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
Length = 410
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 160/317 (50%), Gaps = 20/317 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ CAG V +PK VYYFP GH+E + S N L R I C V ++
Sbjct: 12 KIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPSPNPSTLSL--LDRSRQFIPCTVSTVN 69
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS-PRPKVHSFSKVLTASDTSTHGGFS 139
L+A+ TDEV+ ++ L P + P D KV S K LT SD + G FS
Sbjct: 70 LLADPVTDEVFVKLLLTPGTNNCVHEPPPEVREDQHDGVKVVSSGKTLTPSDANNGGAFS 129
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V + A PPLD+ P+Q+L D+HG EW+ +H++RG P RHL+TT WS FV K
Sbjct: 130 VPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPLRHLITTNWSEFVDEK 189
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM- 258
+L+ GD+ VF++ + +Q ++ I+ +S+ T + +A + M
Sbjct: 190 KLIGGDSLVFMKKSTRTGTETISVGIHRQKFGAATKIAEKSV------TEAVELAEKNMA 243
Query: 259 FVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVVGVE 313
F V Y P F+++ +A+ NK+ G+R K + ++S +R F GT+ +
Sbjct: 244 FDVVYYPTAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLKKDNSSKRCSNFEGTISALS 303
Query: 314 DFSPHWKDSKWRSLKVQ 330
+P + WR L+V+
Sbjct: 304 --AP---NRPWRMLEVR 315
>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 114/193 (59%), Gaps = 4/193 (2%)
Query: 161 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVG 220
+ ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG
Sbjct: 74 ETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVG 133
Query: 221 VRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 278
+R R + + + + + A+ A F V Y PR S +F + +
Sbjct: 134 IRRAKRGIAGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVR 193
Query: 279 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 336
AV ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 194 SAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDL 253
Query: 337 ITRPDRVSPWEIE 349
+ RVSPW +E
Sbjct: 254 LQNVKRVSPWLVE 266
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E A TN + R+P+ +LCRV
Sbjct: 8 LDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAAAP---RIPALVLCRVA 62
Query: 78 NIHLMAEQETDE 89
+ MA+ ETDE
Sbjct: 63 AVKFMADPETDE 74
>gi|304308125|gb|ADL70375.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 159/285 (55%), Gaps = 62/285 (21%)
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV+S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVSSE--NIPKSVM 58
Query: 365 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 424
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 425 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 482
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 483 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 537
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 538 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 582
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|110739728|dbj|BAF01771.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 194
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 108/175 (61%), Gaps = 28/175 (16%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 28 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 62
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 63 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 119
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 671
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+
Sbjct: 120 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKI 174
>gi|284811249|gb|ADB96363.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811251|gb|ADB96364.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811253|gb|ADB96365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811257|gb|ADB96367.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308107|gb|ADL70366.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308111|gb|ADL70368.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308113|gb|ADL70369.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308115|gb|ADL70370.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308117|gb|ADL70371.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308119|gb|ADL70372.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308121|gb|ADL70373.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308123|gb|ADL70374.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308129|gb|ADL70377.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 365 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 424
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 425 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 482
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 483 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 537
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 538 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 582
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|304308109|gb|ADL70367.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+SGTV+GV+D SPHWKDSKWR L+V WDEPA+I+RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPATISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 365 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 424
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 425 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 482
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 483 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 537
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 538 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 582
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|284811255|gb|ADB96366.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWE EPFV+S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWETEPFVSSE--NIPKSVM 58
Query: 365 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 424
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 425 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 482
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 483 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 537
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 538 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 582
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
Length = 456
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 164/334 (49%), Gaps = 15/334 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
E+W CA V +PK RVYYFPQGH+E S++ + L LC V +
Sbjct: 13 EIWHTCATAAVKIPKLHSRVYYFPQGHLENASPSSSSITHTHSFLQSFRPFTLCIVSAVD 72
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-SPRPKVHSFSKVLTASDTSTHGGFS 139
L+A+ TDEV+ ++ L P + P A+ + R +V SF K LT SD + F
Sbjct: 73 LLADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSDVNNARSFH 132
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-TTGWSTFVTS 198
+ R A P LD+ + +Q L D+HG +F H+ RG P+R++L + W++FV
Sbjct: 133 IPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYISEWNSFVKR 192
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
K+LVAGD+ +F++ G++ VG+R Q ++ + V+ A +
Sbjct: 193 KKLVAGDSVIFMKDSTGKIFVGIR--RNTQFVAAAAEQKKDELEKAVMEALKLAEENKAF 250
Query: 259 FVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
+VYY P+ F++ N E++ ++ MR KM+ + S + GT+ V
Sbjct: 251 EIVYY-PQGDDWCDFVVDGNVVDESMKIQWNPRMRVKMK--TDKSSRIPYQGTISIVSRT 307
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 349
S + WR L+V WDE P RV+PW +E
Sbjct: 308 S-----NLWRMLQVNWDEFQVSQIPRRVNPWWVE 336
>gi|304308105|gb|ADL70365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308127|gb|ADL70376.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 157/285 (55%), Gaps = 62/285 (21%)
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+SGTV+GV+D SPHWKDSKWR L+V WDEPAS +RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASTSRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 365 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 424
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 425 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 482
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 483 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 537
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 538 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 582
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
Length = 366
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 125/232 (53%), Gaps = 13/232 (5%)
Query: 7 SLSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
+L Q + D + R++W ACA P VP G VYYFP GH EQ L +P
Sbjct: 6 ALPQGHGDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQ-------HLLAPLPA 58
Query: 66 -FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHS 122
R P C V ++ L AE TDEV+A+I+L P P+ P P P ++S R +
Sbjct: 59 SHRFP--CTCTVTDVSLGAEDRTDEVFAKISLRPGPAAASRPEPGPGPGSSNSTRQGLSY 116
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F L DTST G F + R P LD+N + P Q+LV +D G W+F HI+ +
Sbjct: 117 FVNELLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVK 176
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
R+H LT GWS FV +K LVAGDT VF+R NG+L +G+R A + S P +
Sbjct: 177 IRQHRLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRRKATRTSWRPRA 228
>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
gi|194708626|gb|ACF88397.1| unknown [Zea mays]
Length = 543
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 100/131 (76%), Gaps = 10/131 (7%)
Query: 258 MFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 315
MF VYYKPRTS +FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+
Sbjct: 1 MFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60
Query: 316 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLS 373
P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V P++ ++ KRPR
Sbjct: 61 DPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLVHSSRAKRPR-- 114
Query: 374 MEVPPLDLPSA 384
VPP L S+
Sbjct: 115 QNVPPPSLESS 125
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 494 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 543
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 338 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 393
Query: 544 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 601
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 394 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 451
Query: 602 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 660
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 452 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 511
Query: 661 DVKKMSPGSKLP 672
+V+KM+ S P
Sbjct: 512 EVQKMNSKSAAP 523
>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 176/690 (25%), Positives = 254/690 (36%), Gaps = 186/690 (26%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV YFPQGH E A N + R+P +LCRV +
Sbjct: 18 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNP----RIPPLVLCRVSAVK 71
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
+A+ E+DE PE K SF+K LT SD + +GG
Sbjct: 72 YLADPESDEA-------PE-------------------KPASFAKTLTQSD-ANNGG--- 101
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
GWS FV K
Sbjct: 102 --------------------------------------------------GWSNFVNKKN 111
Query: 201 LVAGDTFVFLRGENGELHVGVR------C-------LARQQSSMPSSVISSQS------M 241
LVAGD+ VFLR ENG+L VG+R C R+ + P S+ +
Sbjct: 112 LVAGDSIVFLRAENGDLCVGIRRAKRAGCGPEGYSGFLREDENRPILTHSNAGFRGKGRV 171
Query: 242 HLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
+A A+ A FV+ Y PR S +F + + A+ ++ GM++KM FE +D
Sbjct: 172 RAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVRAAMQIQWCPGMKFKMAFETDD 231
Query: 300 SPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
S F G + V P W +S WR L+V WDEP + RV+PW +E + S P
Sbjct: 232 SSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLVE--LVSHVP 289
Query: 358 NL-VQPVLAKNKRPRLSM--------EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAED 408
++ + P K+ RL ++P S A P S S N+ A
Sbjct: 290 SIHLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQGAR- 348
Query: 409 KRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA 468
H + SD N K LF + + +A P+
Sbjct: 349 -----HAQFGLSSSDLHFN-------------------KLQLGLFPLGLQQQLDQTAPPS 384
Query: 469 HSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR--------LFG--IELINHATSSAPS 518
+ NN+ + + G T+ LFG I + + S
Sbjct: 385 SILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAPYFFLFGQPILIEQQVSQSCSG 444
Query: 519 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV-QVSPKESQSKQSCLTSN 577
+ +SS SDG + F + Q P+ES S + LT
Sbjct: 445 DTAGISS----------------SDGNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLTWY 488
Query: 578 R-----------SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 626
+ KV M+ VGR LDL+ L Y+ L +L MF I+
Sbjct: 489 KDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIE---RAEMLSN 545
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
++Y D+ G + +GD P+ EF +R+ I
Sbjct: 546 VLYRDEAGIVKHIGDAPFGEFLKTARRLTI 575
>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 115/193 (59%), Gaps = 3/193 (1%)
Query: 211 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ- 269
RG++GEL +GVR + ++ + SQ +LG LA +HAV+T++MF ++Y PR SQ
Sbjct: 12 RGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQS 71
Query: 270 -FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLK 328
FI+ K+ ++++ F+VG R+KMR+E ED+ ERR++G + G D P W+ SKW+ L
Sbjct: 72 EFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADPRWRGSKWKCLL 131
Query: 329 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 388
V+WD+ RP+R+SPWEIE A++ +L P +K +P L P +P P
Sbjct: 132 VRWDDDGEFRRPNRLSPWEIELTSAASGSHLAAPT-SKRMKPYLPHANPEYTVPYGGGRP 190
Query: 389 WSARLAQSHNLTQ 401
A AQ + Q
Sbjct: 191 DFAESAQLRKVLQ 203
>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
Length = 523
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 184/412 (44%), Gaps = 57/412 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ AGP V +PK G +VYYF +GH+E +S N E + L P +LC + ++
Sbjct: 12 KIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSSPNIE--TELLLCLRPPSVLCIISSVD 69
Query: 81 LMAEQETDEVYAQITLLPEPSQN-----EPTTPD------------------PCPADSPR 117
L+A TDEV+A++ L P + EP PD P P + P
Sbjct: 70 LLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPAPPEVPD 129
Query: 118 PK------VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 171
+ + S+ K+LT SDT G V R+ P LD+ +++L D+
Sbjct: 130 EEDDDSNNLVSYVKILTQSDT--QSGLFVPRECMELIFPNLDLEDPMQSEKLSVTDIQDV 187
Query: 172 EWRFKHIFRGQP-RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
W +K+ + + + TTGWS FV K+LVA D+ VF++ G++ VG+ C +
Sbjct: 188 VWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGI-CRKAMYPA 246
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVG 288
S+++ + A F V Y P + F++ + EA+ N + G
Sbjct: 247 TEEEGGKSENLTEKAVKDAVELAGKNMAFQVVYYPTANWCDFVVDASVVDEAMKNGWEFG 306
Query: 289 MRYKMR---FEGEDSPERRF--SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 343
M K+R F +S + + GT+ + + + WR L+V WD P P+RV
Sbjct: 307 MGIKLRLNEFASSNSKKTYYQPKGTISNMSNVPSNVP--SWRMLQVNWDGPDISQNPNRV 364
Query: 344 SPWEIE--PFVASATPNLVQP-----------VLAKNKRPRLSMEVPPLDLP 382
+PW+++ P + ++ L P K PRLS PL +P
Sbjct: 365 NPWQVDIYPIPSQSSSPLQMPHSYPPIPPPLLPFPPTKSPRLSQSSSPLQMP 416
>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ C GP V +PK +VYYFP+GH+E A ++ R L R S I C V ++
Sbjct: 12 KIWQICVGPDVKIPKIHSKVYYFPRGHLEH--ACSSPTAATRTILDRYRSSIPCIVSSVD 69
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L + TDEV+A++ L P Q P P D + S+ K LT SD + V
Sbjct: 70 LFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCTR--VLCV 127
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
+ + P LD+++S Q + DL EWR+ + + R H TGW FV K+
Sbjct: 128 PIECSNLIFPKLDLDKS---QSITVTDLKNQEWRYTYTYSNSSRLH---TGWLNFVREKK 181
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
LVA D+ VF++ G++ VG+R + + + + + + VL A A V
Sbjct: 182 LVANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTDEIKVLDAAELAEKNTAFDV 241
Query: 261 VYYKPRTS---QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-----GTVVGV 312
VYY P S F++ +A+ + GMR K+ + +S + + GT+ V
Sbjct: 242 VYY-PTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKGTISFV 300
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE------PFVASATPNLVQPVLAK 366
+ S + + WR L+V WD P+ V+PW++E P +S+T N P LA+
Sbjct: 301 FNHSSNVPN--WRILEVNWDGLDIPQIPNLVNPWQVEVYNIHAPSTSSSTVN--NPRLAE 356
Query: 367 NKRPR 371
+ P+
Sbjct: 357 SSSPQ 361
>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
Length = 273
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 98/189 (51%), Gaps = 35/189 (18%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L ELW ACAGPLV +P G RV YFPQGH EQ
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQ--------------------------- 53
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHG 136
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHG
Sbjct: 54 -----ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTHG 108
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG R L W
Sbjct: 109 GFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RDSYLEQSWPVIT 166
Query: 197 TSKRLVAGD 205
S R V D
Sbjct: 167 LSGRRVGRD 175
>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ CAGP V +PK +VYYFP+GH+E A ++ R L R S I C V ++
Sbjct: 12 KIWQICAGPDVKIPKIHSKVYYFPRGHLEH--ACSSPTAATRTILDRYRSSIPCIVSSVD 69
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L + TDEV+A++ L P Q P P D + S+ K LT SD + V
Sbjct: 70 LFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCTR--VLCV 127
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
+ + P LD+++S Q + DL E + + + R H TGW FV K+
Sbjct: 128 PIECSNLIFPKLDLDKS---QSITVTDLKNQERGYTYTYSNSSRLH---TGWLNFVREKK 181
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
LVA D+ VF++ G++ VG+R + + + + + VL A A V
Sbjct: 182 LVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVLDAAELAEKNTAFDV 241
Query: 261 VYYKPRTS---QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-----GTVVGV 312
VYY P S F++ +A+ + GMR K+ + +S + + GT+ V
Sbjct: 242 VYY-PTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKGTISFV 300
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE------PFVASATPNLVQPVLAK 366
+ S + + WR L+V WD P+ V+PW++E P +S+T N P LA+
Sbjct: 301 YNHSSNVPN--WRMLEVNWDGLDIPQNPNLVNPWQVEVYNIPAPSTSSSTVN--NPRLAE 356
Query: 367 NKRPR 371
+ P+
Sbjct: 357 SSSPQ 361
>gi|304308173|gb|ADL70399.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 192
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFI 192
>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
Length = 239
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 8/212 (3%)
Query: 3 NRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
L S + P+ + + ++W+ C G V +PK +VYYFPQGH++ + T L
Sbjct: 20 GELHSEAFPTKSIFTIPTKIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHTIITL--- 76
Query: 63 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPA-DSPRPK 119
L P I C + + L+ + TDEV+A++ L P + +E P PA D
Sbjct: 77 --LHCYPPSISCIISAVDLLVDPHTDEVFAKLLLTPVMDGHGHEQEAPPEVPAEDDDGYN 134
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LT SD ++ GF V LP L ++ P+Q+L D+ G W++ HI+
Sbjct: 135 VVSFVKILTQSDCNSGCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIY 194
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 211
RG+ +RHL + GW++FV +K+LVAGD+FVF++
Sbjct: 195 RGKSKRHLFSRGWTSFVNNKKLVAGDSFVFIK 226
>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
Length = 631
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Query: 209 FLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS 268
+R +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S
Sbjct: 5 LVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRAS 64
Query: 269 --QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKW 324
+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S W +S W
Sbjct: 65 PSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHW 124
Query: 325 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 370
RS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 125 RSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPTYTSPFPLRLKRP 168
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWH 645
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW
Sbjct: 575 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQ 631
>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
Length = 323
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 150/309 (48%), Gaps = 23/309 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ C G V +PK RVYYFPQGH+E +S++ + L R +C + +
Sbjct: 20 QIWQTCTGAAVQIPKLHSRVYYFPQGHLEHASSSSSNAYIHSLDLQRFRPFTICIISAVD 79
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA-----DSPRPKVHSFSKVLTASDTSTH 135
L+A+ TDEV+A++ L P + + P P D + SF+++L ++ S H
Sbjct: 80 LLADPHTDEVFAKLLLTPVTNNSCVQDPHEVPNCSNDDDVCDEVIDSFTRILALTNVSKH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-TTGWST 194
F + R A PPL M S Q L+ D+HG W+F H+ G +R++ T+ W++
Sbjct: 140 -AFYIPRFCAENMFPPLGMEVS---QHLLVTDVHGEVWKFHHVCHGFAKRNVFYTSEWAS 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+L GD VF++ G+L VG+R R+ ++ + V+ A
Sbjct: 196 FVERKKLDVGDAVVFMKNSTGKLFVGIR---RKDAAEQ----KKDELEKAVMEAVKLAEE 248
Query: 255 TQTMFVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 311
+ +VYY PR F++ N E++ ++ MR KM+ + S + GT+
Sbjct: 249 NKPFEIVYY-PRGDDWCDFVVDGNIVDESMKIQWNPRMRVKMK--TDKSSRIPYQGTITT 305
Query: 312 VEDFSPHWK 320
V S W+
Sbjct: 306 VSRTSNLWR 314
>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
Length = 627
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 164/368 (44%), Gaps = 37/368 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ +TDEV+A+I L+P + + A + K SF+K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GG V +K L S DL R K G P
Sbjct: 139 NGGGTFVNQKK-------LVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPP 191
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
+ G +FLRG++ G + A + + + V + V+ A+ AV
Sbjct: 192 PPTPAAGGNYGGFSMFLRGDDD----GNKMAAAARGKVRARVRPEE-----VVEAANLAV 242
Query: 254 ATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVV 310
+ Q VVYY PR S +F + A+ ++ GMR+KM FE EDS F GTV
Sbjct: 243 SGQPFEVVYY-PRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVS 301
Query: 311 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 369
V+ P W +S WR L+V WDEP + RVSPW +E + S P + LA
Sbjct: 302 AVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSP 356
Query: 370 PRLSMEVP 377
PR + VP
Sbjct: 357 PRKKLCVP 364
>gi|304308169|gb|ADL70397.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+L + KW IV+TDDEGD MLVGDDPW+EFC M K
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|304308163|gb|ADL70394.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+L + KW IV+TDDEGD MLVGDDPW+EFC M K
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
Length = 672
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 111/190 (58%), Gaps = 13/190 (6%)
Query: 486 LEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG 544
+ + T +K E+ TS CRLFGIE I A S PV+++ + G A D
Sbjct: 460 INKAPTEKKQESATSGCRLFGIE-IGSAVS-------PVATVASVGQ---DQPPALSVDV 508
Query: 545 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 604
+SD + + V+ E +S RS TKV MQG+AVGRA+DLT L GY
Sbjct: 509 ESDQLSQPSNANKTDAPVASSERSLNESESRQVRSCTKVIMQGMAVGRAVDLTRLDGYAD 568
Query: 605 LIDELEEMFDIKGQLHTR-TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
L +LEEMFDI+G+L KW+++YTDDE D MLVGDDPW+EF MVKRI+I S ++ K
Sbjct: 569 LHRKLEEMFDIQGELSANLKKWKVIYTDDEDDTMLVGDDPWNEFLRMVKRIYIYSYEEAK 628
Query: 664 KMSPGSKLPM 673
++ +K P+
Sbjct: 629 SLTRKAKPPV 638
>gi|304308179|gb|ADL70402.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 187
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 94/154 (61%), Gaps = 24/154 (15%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 651
+L + KW IV+TDDEGD MLVGDDPW+EFC M
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMA 187
>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
Length = 450
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 138/255 (54%), Gaps = 31/255 (12%)
Query: 435 QSDGEW---LTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ-V 489
+S G W L SP + FS ++ N S ++G + P+ + + L E+ V
Sbjct: 164 ESQGNWFVSLISPSQADFSGTHAPGKLERNPTRSIGTGNTGMAVQQPNLLSREMLEEKGV 223
Query: 490 ETGRKTETGTSCRLFGIELINHATSSAPSE----------KVPVSSLT------TEGHII 533
+G ++ C+LFG LI ++ PS V V ++T +E
Sbjct: 224 LSGTRS---ADCKLFGFHLIENSVVGEPSTLRGLAAGEDIHVSVPNITVHEPQSSESDQH 280
Query: 534 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 593
S S+ A D + I E K Q S KE+ ++ S RS TKV QG A+GRA
Sbjct: 281 SEPSSIAKMDMPAAIIDEEKSS-----QKSSKETHNRPQS-NSTRSCTKVHKQGSALGRA 334
Query: 594 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
+DLT GY LI ELE+MF+I+G+L K W++VYTD+EGDMMLVGDDPW EFC++V+
Sbjct: 335 VDLTKFEGYTELIRELEQMFNIEGELEDPNKGWQVVYTDNEGDMMLVGDDPWQEFCSIVR 394
Query: 653 RIFICSSQDVKKMSP 667
+I+I + ++V+KM+P
Sbjct: 395 KIYIYTREEVEKMTP 409
>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 379
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 164 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 219
Query: 558 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 220 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 279
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 280 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 338
>gi|298112255|gb|ADB96374.2| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 26/177 (14%)
Query: 475 PHPSKPNNDTLLEQVETGRKTE--TGTSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGH 531
P + +N ++ V + TE +SCRLFG +L + A+++ P +K
Sbjct: 31 PATERNSNKSVFSSVLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDK----------Q 80
Query: 532 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVG 591
+IS S +DS K + SPKE + + TS RSR KVQMQG AVG
Sbjct: 81 LISVDSNISDSTTKC---------QDPNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVG 127
Query: 592 RALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
RA+DLT L YD LI ELE+MF+I+G+L + KW IV+TDDEGD MLVGDDPW+EFC
Sbjct: 128 RAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFC 184
>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (328), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (328), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (328), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
Length = 152
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 75/108 (69%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI
Sbjct: 8 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHI 67
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R
Sbjct: 68 YRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 115
>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
Length = 454
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 488 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 544
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 238 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 295
Query: 545 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
S + +E+ + + PK++Q+K S+RS TKV QG+A+GR++DL+ Y
Sbjct: 296 GSKSTNDHREQGRPFQTNNPHPKDAQTK---TNSSRSCTKVHKQGIALGRSVDLSKFQNY 352
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 353 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 412
Query: 662 VKKMSPGS 669
V+KM+PG+
Sbjct: 413 VRKMNPGT 420
>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
Length = 138
Score = 130 bits (327), Expect = 3e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|304308157|gb|ADL70391.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308165|gb|ADL70395.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308167|gb|ADL70396.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 93/151 (61%), Gaps = 24/151 (15%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
+L + KW IV+TDDEGD MLVGDDPW+EFC
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFC 184
>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
Length = 135
Score = 129 bits (324), Expect = 5e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|304308269|gb|ADL70447.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 326 SLKVQWDEPASITRPDRVSPWEIEPFVASA 355
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|291196877|emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
Length = 478
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 112/200 (56%), Gaps = 21/200 (10%)
Query: 475 PHPSKPNNDTLLEQVETGRKTETG---TSCRLFGIELINHATSSAPSEKVPVSSLTTE-G 530
P P D ++ G+ T + CRLFG L +E+ P+S+ +
Sbjct: 245 PDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSL---------TEEPPLSNEAMDPA 295
Query: 531 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGV 588
H+ ++S+ D + KS E Q K+S+SK CL T+NRS TKV QG
Sbjct: 296 HV--SLSSNDDFNSKSSFQPSTWTVSCETQQ---KQSESKSQCLNKTANRSCTKVHKQGS 350
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEF 647
VGRA++L+ GYD LI ELE +F+++G L+ K W++VYTD + DMMLVGDDPW EF
Sbjct: 351 MVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQEF 410
Query: 648 CNMVKRIFICSSQDVKKMSP 667
CN+V +I I + +V+KM P
Sbjct: 411 CNIVSKILIYTHDEVEKMIP 430
>gi|304308263|gb|ADL70444.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308267|gb|ADL70446.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308271|gb|ADL70448.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308273|gb|ADL70449.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308277|gb|ADL70451.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308279|gb|ADL70452.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308281|gb|ADL70453.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308283|gb|ADL70454.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 326 SLKVQWDEPASITRPDRVSPWEIEPFVASA 355
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|304308275|gb|ADL70450.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308285|gb|ADL70455.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 224
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 105 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 139
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 140 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 196
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 197 GQLLARDKWIVVFTDDEGDMMLAGDDPW 224
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 27/29 (93%)
Query: 327 LKVQWDEPASITRPDRVSPWEIEPFVASA 355
L+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 LQVQWDEPTTVQRPDKVSPWEIEPFLATS 29
>gi|304308265|gb|ADL70445.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 226
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 107 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 141
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 142 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 198
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 199 GQLLARDKWIVVFTDDEGDMMLAGDDPW 226
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 325 RSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
RSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 RSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 31
>gi|284811299|gb|ADB96388.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811301|gb|ADB96389.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811305|gb|ADB96391.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811307|gb|ADB96392.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 222
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 103 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 137
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 138 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 194
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 195 GQLLARDKWIVVFTDDEGDMMLAGDDPW 222
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 329 VQWDEPASITRPDRVSPWEIEPFVASA 355
VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 VQWDEPTTVQRPDKVSPWEIEPFLATS 27
>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
Length = 273
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 119/228 (52%), Gaps = 27/228 (11%)
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
PRP SF+KVLTASD + FSVL A P LD + TP Q + +D+HG EW F
Sbjct: 52 PRPV--SFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEWMF 109
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
HI+RG P+RHLLT GW+ FV +K+L GD+ VF+R E+ ++HVG+R R +M +
Sbjct: 110 CHIWRGSPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQGNG 169
Query: 236 ISSQSMHL----GVLAT-----ASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNK 284
+ G ++T A+ F V Y P +S+F +S+ E++
Sbjct: 170 GGPAGAVVGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVAAVKESM--- 226
Query: 285 FAVGMRYKMRFEGEDSPERR---FSGTVVGVEDFSPH-WKDSKWRSLK 328
+M FE E+S + F GT+ VE P W +S WR LK
Sbjct: 227 -------QMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267
>gi|304308287|gb|ADL70456.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLSSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 326 SLKVQWDEPASITRPDRVSPWEIEPFVASA 355
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|298113241|gb|ADB96390.2| auxin response factor 18 [Arabidopsis thaliana]
Length = 231
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 497 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 556
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 112 TNCSYRLFGFDLSSNSPAPIPQDKQP----------MDTCGAA---------------KC 146
Query: 557 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 616
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 147 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 203
Query: 617 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 644
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 204 GQLLARDKWIVVFTDDEGDMMLAGDDPW 231
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 322 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 355
SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 3 SKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 36
>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
Length = 454
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 488 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 544
Q ET + E +CRLFGI L N+ T S S+K ++ I S + +D
Sbjct: 238 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQKNNLNDAAGLTQIASPKVQDLSDQSK 295
Query: 545 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 602
S + +E+ + + PK++Q+K S+RS TKV QG+A+GR++DL+ Y
Sbjct: 296 GSKSTNDHREQGRPFQTNNPHPKDAQTK---TNSSRSCTKVHKQGIALGRSVDLSKFQNY 352
Query: 603 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 353 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 412
Query: 662 VKKMSPGS 669
V+KM+ G+
Sbjct: 413 VRKMNQGT 420
>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
gi|223949733|gb|ACN28950.1| unknown [Zea mays]
gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
Length = 446
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 162/347 (46%), Gaps = 40/347 (11%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS--KILCRVV 77
R++W ACA P +P G VYYFP GH+EQ +Q + LP+ + C V
Sbjct: 20 RDVWLACAAPFSRIPTVGDEVYYFPDGHIEQ---------HQHLSAAPLPAQDRFHCTVT 70
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP-------TTPDPCPADSPRPKVHSFSKVLTAS 130
++ L + +TDEV+A+I+L P P + ++ P PA P K+ F+K L+ +
Sbjct: 71 DVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPAPGPPQKLRYFTKDLSQT 130
Query: 131 DTSTHGGFSVLRKHATECLPPLDMN----QSTPTQELVAKDLHGYEWRFKHIFRGQP-RR 185
D + +H +P ++ + Q Q++V +D G WRF +R P +
Sbjct: 131 DVYAKFRIPLENEHVLP-IPKVETDGADQQRVQRQDVVMRDTRGKSWRFSETYRVNPSKE 189
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
H L TGW F +KRL AGD VF+R NG+L VGVR L + Q V
Sbjct: 190 HSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLHVPRYRP----FDFQGPAQDV 245
Query: 246 LATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
+ A A + F V Y PR + +FI+ ++ +A+ + G +M +++ +
Sbjct: 246 MEAVRLAAAGRP-FTVTYFPRQAAVEFIVPRSEVDDALATSWEPGAVVRMEVMEDENRQH 304
Query: 304 RFSGTVVGVEDFSPHWKDSKWRSLKVQW--DEPASITRPDRVSPWEI 348
V V + + WR L++ W D P + TR V+ W++
Sbjct: 305 -----TVWVHGRVNAIRQNIWRMLEIIWGVDPPLATTR--SVNAWQV 344
>gi|284811273|gb|ADB96375.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811275|gb|ADB96376.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811277|gb|ADB96377.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308159|gb|ADL70392.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308161|gb|ADL70393.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308175|gb|ADL70400.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308181|gb|ADL70403.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 183
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 92/150 (61%), Gaps = 24/150 (16%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 647
+L + KW IV+TDDEGD MLVGDDPW+EF
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEF 183
>gi|284811269|gb|ADB96373.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308171|gb|ADL70398.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308177|gb|ADL70401.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 180
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 24/147 (16%)
Query: 499 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 558 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 617
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPW 644
+L + KW IV+TDDEGD MLVGDDPW
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPW 180
>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 86 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 144
ETDEVYAQ+TL P Q + P P + + F K L ASDTSTHGGFSV R+
Sbjct: 69 ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 128
Query: 145 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
A + P LD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTG+
Sbjct: 129 AEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176
>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Query: 86 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 144
ETDEVYAQ+TL P Q + P P + + F K L ASDTSTHGGFSV R+
Sbjct: 96 ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 155
Query: 145 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTG
Sbjct: 156 AEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 202
>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
Length = 180
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 60/75 (80%)
Query: 9 SQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
S+ +DLY ELWKACAGPLV+VP G+RV+YFPQGHMEQLE STNQELN +IP F L
Sbjct: 11 SRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDL 70
Query: 69 PSKILCRVVNIHLMA 83
P KILCRVVNI L+
Sbjct: 71 PPKILCRVVNIRLLV 85
>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
Length = 418
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 152/326 (46%), Gaps = 26/326 (7%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA P +P G V YFP GH+EQ ++ Q L + + C V ++
Sbjct: 61 RDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQ-------HRFHCTVTDV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-----KVHSFSKVLTASDTST 134
L + +TDEV+A+I+L P P + P P + + K+ F+K L+ +D
Sbjct: 114 SLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELSQTDVYA 173
Query: 135 HGGFSVLRKHATECLP-PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP-RRHLLTTGW 192
+ +H LP P+ Q++V +D G WRF + P ++H LTTGW
Sbjct: 174 RFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLTTGW 230
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
F +KRL AGD VF+R NG+L VGVR L + + + A
Sbjct: 231 LDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDVMEAVRL 290
Query: 253 VATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
A F V Y PR + +FI+ ++ +A+ + G +M E + R+++ VV
Sbjct: 291 AAAGRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRM--EVMEDENRQYTMWVV 348
Query: 311 G-VEDFSPHWKDSKWRSLKVQWDEPA 335
G VE + + WR L++ W P+
Sbjct: 349 GRVEAI----RQNIWRMLEIIWGVPS 370
>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
gi|194689238|gb|ACF78703.1| unknown [Zea mays]
Length = 430
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 152/326 (46%), Gaps = 26/326 (7%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA P +P G V YFP GH+EQ ++ Q L + + C V ++
Sbjct: 61 RDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQ-------HRFHCTVTDV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-----KVHSFSKVLTASDTST 134
L + +TDEV+A+I+L P P + P P + + K+ F+K L+ +D
Sbjct: 114 SLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELSQTDVYA 173
Query: 135 HGGFSVLRKHATECLP-PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP-RRHLLTTGW 192
+ +H LP P+ Q++V +D G WRF + P ++H LTTGW
Sbjct: 174 RFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLTTGW 230
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
F +KRL AGD VF+R NG+L VGVR L + + + A
Sbjct: 231 LDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDVMEAVRL 290
Query: 253 VATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
A F V Y PR + +FI+ ++ +A+ + G +M E + R+++ VV
Sbjct: 291 AAAGRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRM--EVMEDENRQYTMWVV 348
Query: 311 G-VEDFSPHWKDSKWRSLKVQWDEPA 335
G VE + + WR L++ W P+
Sbjct: 349 GRVEAI----RQNIWRMLEIIWGVPS 370
>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
Length = 431
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
S RS TKV G AVGR++DL+ L GY L+ ELE++F+++G LH K W +VYTD+E
Sbjct: 311 ASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNE 370
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
DM+LVGDDPW EFC++V +I IC+ DV+ MSP
Sbjct: 371 NDMVLVGDDPWQEFCDVVCKILICTQDDVENMSP 404
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 304 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 362
R SG + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P
Sbjct: 1 RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSV--LPPALNVP 58
Query: 363 VLAKNKRPRL 372
L K RP L
Sbjct: 59 RL-KKLRPSL 67
>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
Length = 752
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 151/340 (44%), Gaps = 44/340 (12%)
Query: 20 RELWKACAGPLVDV-PKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI---LCR 75
R++W ACA P V P G VYY P GH+EQ L+ RLP I C
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLS------RLPDPIHPVPCT 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ L + E+ E YA I+LLP S ++ T PA P F K L+ +D +++
Sbjct: 75 VADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSN 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL------- 188
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 133 A--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVND 190
Query: 189 TTGWSTFVTSKRLVAGDTFVFLR------GENGELHVGVRCLARQQSS-MPSSVISSQSM 241
GW FV +KRL DT VF+R +GEL VGVR R + P +
Sbjct: 191 NDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK- 249
Query: 242 HLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLE---AVNNKFAVGMRYKMRFE 296
V++ A+ T F V Y PR T +F++S ++Y+ + F G +R
Sbjct: 250 ---VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMN 306
Query: 297 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 336
+ SGTV + P WR L+V WD+ AS
Sbjct: 307 PLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 339
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 44/292 (15%)
Query: 87 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 137
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 423 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 479
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 192
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 480 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 532
Query: 193 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
S FV +KRL GDT +F+R GE VGVR + MP + +A A
Sbjct: 533 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVR--RKPHGGMPVGIPDKH------VADAWL 584
Query: 252 AVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
++ F V Y P T++F++ + +E + A G R ++ +D+ RR V
Sbjct: 585 DASSAQPFRVTYCPWQGTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDA-RRRSQPPV 641
Query: 310 VG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 358
G V D H + S+WR L+V WD P + T RV+ W+++P + P
Sbjct: 642 YGTVRDV--HCR-SEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 690
>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
Length = 728
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 151/340 (44%), Gaps = 44/340 (12%)
Query: 20 RELWKACAGPLVDV-PKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI---LCR 75
R++W ACA P V P G VYY P GH+EQ L+ RLP I C
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLS------RLPDPIHPVPCT 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ L + E+ E YA I+LLP S ++ T PA P F K L+ +D +++
Sbjct: 75 VADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSN 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL------- 188
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 133 A--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVND 190
Query: 189 TTGWSTFVTSKRLVAGDTFVFLR------GENGELHVGVRCLARQQSS-MPSSVISSQSM 241
GW FV +KRL DT VF+R +GEL VGVR R + P +
Sbjct: 191 NDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK- 249
Query: 242 HLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLE---AVNNKFAVGMRYKMRFE 296
V++ A+ T F V Y PR T +F++S ++Y+ + F G +R
Sbjct: 250 ---VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMN 306
Query: 297 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 336
+ SGTV + P WR L+V WD+ AS
Sbjct: 307 PLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 339
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 44/292 (15%)
Query: 87 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 137
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 399 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 455
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 192
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 456 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 508
Query: 193 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
S FV +KRL GDT +F+R GE VGVR + MP + +A A
Sbjct: 509 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVR--RKPHGGMPVGIPDKH------VADAWL 560
Query: 252 AVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 309
++ F V Y P T++F++ + +E + A G R ++ +D+ RR V
Sbjct: 561 DASSAQPFRVTYCPWQGTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDA-RRRSQPPV 617
Query: 310 VG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 358
G V D H + S+WR L+V WD P + T RV+ W+++P + P
Sbjct: 618 YGTVRDV--HCR-SEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 666
>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 301 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ N+
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--NIS 93
Query: 361 QPVLAKNKRPRLSMEV 376
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 176
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 358 NLVQPVLAKNKRPRLSMEV 376
N+ Q L K K R E+
Sbjct: 93 NISQSSLKKKKHWRQLNEI 111
>gi|357472329|ref|XP_003606449.1| Auxin response factor [Medicago truncatula]
gi|355507504|gb|AES88646.1| Auxin response factor [Medicago truncatula]
Length = 361
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 633
T+ RS TKV QG VGRA+DL+ L GY+ L+ ELE++F ++G L K W I+YTD E
Sbjct: 229 TAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSE 288
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 289 NDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFG 323
>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
Length = 796
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 68/341 (19%)
Query: 18 LYRELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRV 76
+ RE+W+ACA P +P G VYYFP GH +Q + + L R+ LC+V
Sbjct: 404 ITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQCPSRPPEPLPGRV--------FLCKV 455
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPK--VHSFSKVLTASD 131
+ L A + +E++A ++L+P +P P DP P+ SP+ K + SF K LT +D
Sbjct: 456 TAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPS-SPQVKTTLVSFVKPLTCTD 512
Query: 132 TSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
+ ++ R+ A LP L +N+ P L KD+HG EW + ++ H+L+
Sbjct: 513 AVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THMLS 567
Query: 190 TGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GW F + RLV GD VF+R ++GE ++G+R R P SV V+
Sbjct: 568 SGWIKFANANRLVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVDE-------VIEA 617
Query: 249 ASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 307
A + V Y + +F++ L P G
Sbjct: 618 VWRAARLEPFEVAYLSRQDGDEFVVPL--------------------------PNVGPQG 651
Query: 308 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 348
V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 652 KVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 686
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 134/332 (40%), Gaps = 36/332 (10%)
Query: 20 RELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVV 77
R +W ACA P +P G V+YF GH EQ L Q +P P LC V
Sbjct: 18 RAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG---PRVFLCTVA 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ L A+ T+E YA ITL P + P A + ++ F K L +SD
Sbjct: 75 AVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAE 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
F+V A + PPL + Q L+ KDL G F + G R L W
Sbjct: 135 YRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWK 190
Query: 194 TFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
F V GD+ +F+ R ++ EL+VGV R+Q ++ + + +S L A
Sbjct: 191 KFRDDMDFVDGDSVIFMRRRDDDELYVGV----RRQRTLDKPLRTRRSRPPTPLPVAVQE 246
Query: 253 VATQTM-------FVVYYKPRT--SQFIISLNKYLEA--VNNKFAVGMRYKMRFEGEDS- 300
V F Y+ R +F++ E + ++F M + + ED
Sbjct: 247 VIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEEGLRLRSRFTPEMEVEFVWALEDGA 306
Query: 301 -PERRFSGTVVGVEDFSPHWKDSKWRSLKVQW 331
P G + + D + W WRS+++ W
Sbjct: 307 PPSVGPHGKITAIHDTT--W---MWRSVEIGW 333
>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 189
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 358 NLVQPVLAKNKRPRLSMEV 376
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 186
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 63/90 (70%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q S D LY ELW ACA PLV P+ G V+YFPQGH+EQ+EAS NQ ++ L+ LP
Sbjct: 10 QAPSVGDPLYDELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLP 69
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPE 99
K+LCRV+NI L AE + D+VYAQ+ L+ E
Sbjct: 70 PKLLCRVINIELKAEADIDKVYAQVILMLE 99
>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 203
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 36
Query: 301 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 37 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 94
Query: 361 QPVLAKNKRPRLSMEV 376
Q L K K R E+
Sbjct: 95 QSSLKKKKHWRQLNEI 110
>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 173
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 358 NLVQPVLAKNKRPRLSMEV 376
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 187
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 301 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 93
Query: 361 QPVLAKNKRPRLSMEV 376
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 183
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 36
Query: 301 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 37 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 94
Query: 361 QPVLAKNKRPRLSMEV 376
Q L K K R E+
Sbjct: 95 QSSLKKKKHWRQLNEI 110
>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 76/136 (55%), Gaps = 28/136 (20%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
M GV+A+ +A T+ MF V YKPR M+FEG D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGNDF 35
Query: 301 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 360
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 93
Query: 361 QPVLAKNKRPRLSMEV 376
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 28/131 (21%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 358 NLVQPVLAKNK 368
++ Q L K K
Sbjct: 93 DISQSSLKKKK 103
>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+D E+R+ GT++GV D SPHWKDS+W+SLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 358 NLVQPVLAKNKRPRLSMEV 376
++ Q L K K R E+
Sbjct: 93 DISQSSLKKEKHWRQLNEI 111
>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 28/139 (20%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++V PW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSS-- 92
Query: 358 NLVQPVLAKNKRPRLSMEV 376
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|449532340|ref|XP_004173140.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 78
Score = 105 bits (263), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 612 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK- 670
MFD++GQL R KWEIVYTDDEGDMMLVGDDPW EF NMV+RIFICS + VK MS GSK
Sbjct: 1 MFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGSKQ 60
Query: 671 LPMFSIEG 678
L +EG
Sbjct: 61 LTSIEVEG 68
>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 175
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 28/139 (20%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 297
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 298 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 357
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++V PW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSS-- 92
Query: 358 NLVQPVLAKNKRPRLSMEV 376
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Query: 55 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPC 111
T + N RIP + LPS++LC+V NI + A+++TDEVYAQ+ L P S+ + P
Sbjct: 39 TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETDVFPIQSLGS 98
Query: 112 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 171
A S P + F K LTASD STHGGFS+ R+ A + P LD + P QEL+ +DLH
Sbjct: 99 YAKSKHPAEY-FCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDN 157
Query: 172 EWRFKHIFRGQ 182
W F+HI+RG+
Sbjct: 158 MWIFRHIYRGR 168
>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
Length = 722
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 151/347 (43%), Gaps = 51/347 (14%)
Query: 20 RELWKACAGPLVDV-PKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI---LCR 75
R++W ACA P V P G VYY P GH+EQ + + L RLP I C
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAE------DPALLLSRLPDPIHPVPCT 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ L + E+ E YA I+LLP S ++ T PA P F K L+ +D +++
Sbjct: 75 VADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSN 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG-----QPRRHLL-- 188
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 133 A--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYMLGD 190
Query: 189 -----TTGWSTFVTSKRLVAGDTFVFLR--------GENGELHVGVRCLARQQSS-MPSS 234
GW FV +KRL DT VF+R +GEL VGVR R + P
Sbjct: 191 LGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHPRP 250
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLE---AVNNKFAVGM 289
+ V++ + T F V Y PR T +F++S ++Y+ + F G
Sbjct: 251 GVEDNK----VVSEVWLEMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGT 306
Query: 290 RYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 336
+R + SGTV + P WR L+V WD+ AS
Sbjct: 307 TVHLRMNPLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 346
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 120/291 (41%), Gaps = 55/291 (18%)
Query: 87 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 137
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 406 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 462
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 192
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 463 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 515
Query: 193 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVL-ATAS 250
S FV +KRL GDT +F+R GE VGVR + H G+L
Sbjct: 516 SAFVKAKRLCVGDTVIFMRRRPGGEPIVGVR----------------RKPHGGMLVGIPD 559
Query: 251 HAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 310
VA + V T++F++ + +E + A G R ++ +D RR V
Sbjct: 560 KHVADAWLDAV----GTAEFVVR-REEVEG-SPPLAPGTRVRLLMNPDDV-RRRSQPPVY 612
Query: 311 G-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 358
G V D SKWR L+V WD P + T RV+ W+++P + P
Sbjct: 613 GTVRDVH---SRSKWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 660
>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 180
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 28/132 (21%)
Query: 245 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 304
V+A+ +A T+ MF V YKPR M+FEG+D E+R
Sbjct: 1 VIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDFSEKR 34
Query: 305 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 364
+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L
Sbjct: 35 YDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSL 92
Query: 365 AKNKRPRLSMEV 376
K K R E+
Sbjct: 93 KKKKHWRQLNEI 104
>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 55 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPC 111
T + N RIP + LPS++LC+V NI + A+++TDEVYAQ+ L P S+ P
Sbjct: 39 TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETNVFPIQSLGS 98
Query: 112 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 171
A S P + F K LTASD STHGGFS+ R+ A + P LD + P QEL+ +DLH
Sbjct: 99 YAKSKHPAEY-FCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDN 157
Query: 172 EWRFKHIFRGQ 182
W F+HI+RG+
Sbjct: 158 MWIFRHIYRGR 168
>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
Length = 139
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 9/121 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ P + F K LTASD
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSPQEQ---KDVCLLPAELGIPSKQPTNYFCKTLTASD 138
Query: 132 T 132
T
Sbjct: 139 T 139
>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
Length = 283
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 84/166 (50%), Gaps = 40/166 (24%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ + LW C GPL+ +P G +V YFPQG+ EQ+ AST +E + IP+
Sbjct: 13 INQALWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQKEADFDIPI------------ 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
HL A+QE DEV+AQ+TL P +P PD + + SFS+ LT
Sbjct: 61 -SHLHADQENDEVFAQMTLQPFSQTADPFLLPD--FGIQTKQTIVSFSRTLT-------- 109
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
D Q+ P QELVA+DLH EWRF+HI+RG+
Sbjct: 110 ----------------DFTQTPPAQELVARDLHNIEWRFRHIYRGR 139
>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 119
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K L ASDTSTHGGFSV R+ A + P LD +Q P QEL+A+DLH EW+F+HIFRGQ
Sbjct: 31 FCKTLIASDTSTHGGFSVPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 90
Query: 183 PRRHLLTT 190
P+RHLLTT
Sbjct: 91 PKRHLLTT 98
>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 314
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 498 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 557
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 164 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 219
Query: 558 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 611
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 220 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 279
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 644
MFD G+L +K W +VYTD EGDMMLVGDDPW
Sbjct: 280 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 313
>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 168
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 28/131 (21%)
Query: 246 LATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 305
+A+ +A T+ MF V YKPR M+FEG+D E+R+
Sbjct: 1 IASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDFSEKRY 34
Query: 306 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 365
GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S ++ Q L
Sbjct: 35 DGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSL--DISQSSLK 92
Query: 366 KNKRPRLSMEV 376
K K R E+
Sbjct: 93 KKKHWRQLNEI 103
>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
Length = 496
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Query: 211 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS-- 268
R E +L +G+R +R Q+ MPS V+SS SMH+ +LA +HA AT + F +++ PR S
Sbjct: 21 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 80
Query: 269 QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRS 326
+F+I L+KY++A+ + + +VGMR++M FE E+S RR+ GT+ V D P W S WRS
Sbjct: 81 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 140
Query: 327 LKV 329
+KV
Sbjct: 141 VKV 143
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 89/141 (63%), Gaps = 13/141 (9%)
Query: 211 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS-- 268
R E +L +G+R +R Q+ MPS V+SS SMH+ +LA +HA AT + F +++ PR S
Sbjct: 225 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 284
Query: 269 QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRS 326
+F+I L+KY++A+ + + +VGMR++M FE E+S RR+ GT+ V D P W S WRS
Sbjct: 285 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 344
Query: 327 LK-------VQW--DEPASIT 338
+K QW +EP +T
Sbjct: 345 VKGDQGVNATQWLHNEPILVT 365
>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 169
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 285 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 344
F V + +M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VS
Sbjct: 1 FNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS 60
Query: 345 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 376
PW+IE + S+ ++ Q L K K R E+
Sbjct: 61 PWDIEHLIPSS--DISQSSLKKKKHWRQLNEI 90
>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
Length = 541
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 140/319 (43%), Gaps = 33/319 (10%)
Query: 7 SLSQPSSNSDDLYRELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
S +Q + + + R++W ACA P +P G VYYFP GH EQ + + L RI
Sbjct: 242 SSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI-- 299
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVH 121
LC+V ++ L A T+E A I+L+P + + DP PA + +
Sbjct: 300 ------FLCKVTDVRLGAAA-TNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLV 352
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 353 SFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKA 409
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 410 HTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE---- 461
Query: 242 HLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
+ A A + F V Y R +F++ + + + +FA GM + ED
Sbjct: 462 ----VIEAVWRAARREPFEVSYCSRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVED 517
Query: 300 S--PERRFSGTVVGVEDFS 316
P G V+ +E+++
Sbjct: 518 GKLPTIGPQGEVISIENYA 536
>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
Length = 524
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 140/319 (43%), Gaps = 33/319 (10%)
Query: 7 SLSQPSSNSDDLYRELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
S +Q + + + R++W ACA P +P G VYYFP GH EQ + + L RI
Sbjct: 225 SSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI-- 282
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVH 121
LC+V ++ L A T+E A I+L+P + + DP PA + +
Sbjct: 283 ------FLCKVTDVRLGAA-ATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLV 335
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 336 SFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKA 392
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 393 HTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE---- 444
Query: 242 HLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
+ A A + F V Y R +F++ + + + +FA GM + ED
Sbjct: 445 ----VIEAVWRAARREPFEVSYCLRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVED 500
Query: 300 S--PERRFSGTVVGVEDFS 316
P G V+ +E+++
Sbjct: 501 GKLPTIGPQGEVISIENYA 519
>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
Length = 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 131/301 (43%), Gaps = 31/301 (10%)
Query: 7 SLSQPSSNSDDLYRELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
S +Q + + + R++W ACA P +P G VYYFP GH EQ + + L RI
Sbjct: 265 SSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI-- 322
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVH 121
LC+V ++ L A T+E A I+L+P + + DP PA + +
Sbjct: 323 ------FLCKVTDVRLGAAA-TNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLV 375
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 376 SFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKA 432
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 433 HTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE---- 484
Query: 242 HLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
+ A A + F V Y R +F++ + + + +FA GM + ED
Sbjct: 485 ----VIEAVWRAARREPFEVSYCLRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVED 540
Query: 300 S 300
Sbjct: 541 G 541
>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
Length = 881
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 263 YKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 318
Y PRTS +F++ L KY +A + ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 2 YNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPVR 61
Query: 319 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS---ME 375
W +S+WR+L+V WDE + + +RVS WEIE ATP + P + KRP L E
Sbjct: 62 WPNSQWRNLQVGWDESGAGDKQNRVSIWEIE---TVATPFFICPPFFRLKRPLLPGILGE 118
Query: 376 VPPLDLPSAASAPW 389
++ S S PW
Sbjct: 119 DSEIEAASKRSFPW 132
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ TKV G VGR++D+T Y L EL MF ++GQL +T W++V+ D E D
Sbjct: 771 RTYTKVYKLG-NVGRSIDVTRYKNYGELRHELARMFGLEGQLEDPKKTGWQLVFVDHEND 829
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF + V+ I I S Q+V +MS
Sbjct: 830 ILLVGDDPWEEFVSCVRYIKILSPQEVLQMS 860
>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
Length = 429
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 245 VLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 302
+L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ E
Sbjct: 1 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANE 60
Query: 303 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 361
R F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V
Sbjct: 61 RSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VT 116
Query: 362 PVLAKNKRPRLSMEVPPLDL 381
L+ + R + PP DL
Sbjct: 117 HRLSSSVSKRTKLCFPPSDL 136
>gi|20146083|emb|CAD29695.1| early auxin-induced protein 22 [Arabidopsis thaliana]
Length = 278
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 150 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 208
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 209 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 239
>gi|353441048|gb|AEQ94108.1| putative auxin response transcription factor 1 [Elaeis
guineensis]
Length = 58
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 49/55 (89%)
Query: 42 YFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITL 96
YFPQGHMEQLEASTNQ L+Q +PLF LPSKILCRVV++ L AE +TDEVYAQIT+
Sbjct: 2 YFPQGHMEQLEASTNQGLDQHMPLFNLPSKILCRVVHVQLRAEPDTDEVYAQITI 56
>gi|298111013|gb|ADB96329.2| auxin response factor 1 [Arabidopsis thaliana]
Length = 223
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811179|gb|ADB96328.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 216
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 123
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
Query: 5 LGSLSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
+ + QP + +D L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++
Sbjct: 7 MSEMPQPLTENDGEQRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVD 66
Query: 61 QRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITL 96
+IP + LP +++C++ N A+ ETDEVYAQ+TL
Sbjct: 67 AQIPNYPNLPPQLICQLHN----ADVETDEVYAQMTL 99
>gi|304307923|gb|ADL70256.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 211
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307943|gb|ADL70266.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 219
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307941|gb|ADL70265.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 218
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307933|gb|ADL70261.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307937|gb|ADL70263.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 213
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
Length = 304
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 444 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 502
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 48 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 99
Query: 503 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 558
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 100 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 151
Query: 559 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 618
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 152 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 210
Query: 619 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 211 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 260
>gi|304307925|gb|ADL70257.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307929|gb|ADL70259.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307935|gb|ADL70262.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307939|gb|ADL70264.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307945|gb|ADL70267.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307947|gb|ADL70268.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 199
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811183|gb|ADB96330.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811187|gb|ADB96332.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307927|gb|ADL70258.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307931|gb|ADL70260.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 305 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 363
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 364 LAKNKRPRLSMEVPPLDLPSAASAP 388
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
Os07g0183300/Os07g0183600
gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
Length = 762
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 40/295 (13%)
Query: 68 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPKVH-- 121
LP ++ LC+V + L A + +E++A ++L+P +P P DP P+ P+V
Sbjct: 384 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSS---PQVQTT 438
Query: 122 --SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
SF K LT +D + ++ R+ A LP L +N+ P L KD+HG EW +
Sbjct: 439 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 495
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVI 236
++ H+L++GW F + RLV GD VF+R ++GE ++G+R R P SV
Sbjct: 496 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVD 550
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 295
V+ A + V Y + +F++ A+ KF GM +
Sbjct: 551 E-------VIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVW 603
Query: 296 EGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 348
E+ P G V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 604 AVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 652
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 132/335 (39%), Gaps = 42/335 (12%)
Query: 20 RELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVV 77
R +W ACA P +P G V+YF GH EQ L Q +P P LC V
Sbjct: 18 RAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG---PRVFLCTVA 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ L A+ T+E YA ITL P + P A + ++ F K L +SD
Sbjct: 75 AVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAE 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
F+V A + PPL + Q L+ KDL G F + G R L W
Sbjct: 135 YRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWK 190
Query: 194 TFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
F V GD+ +F+ R ++ EL+VGV R+Q ++ + + +S L A
Sbjct: 191 KFRDDMDFVDGDSVIFMRRRDDDELYVGV----RRQRTLDKPLRTRRSRPPTPLPVAVQE 246
Query: 253 VATQTM-------FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 303
V F Y+ R +F++ E G+R + RF E E
Sbjct: 247 VIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEE--------GLRLRSRFTPEMEVEF 298
Query: 304 RFSGTVVGVEDFSPHWKDSK-------WRSLKVQW 331
++ PH K + WRS+++ W
Sbjct: 299 VWALEDGAPPSVGPHGKITAIHDTTWMWRSVEIGW 333
>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
Length = 721
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 40/295 (13%)
Query: 68 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPKVH-- 121
LP ++ LC+V + L A + +E++A ++L+P +P P DP P+ P+V
Sbjct: 343 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSS---PQVQTT 397
Query: 122 --SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
SF K LT +D + ++ R+ A LP L +N+ P L KD+HG EW +
Sbjct: 398 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 454
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVI 236
++ H+L++GW F + RLV GD VF+R ++GE ++G+R R P SV
Sbjct: 455 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVD 509
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 295
V+ A + V Y + +F++ A+ KF GM +
Sbjct: 510 E-------VIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVW 562
Query: 296 EGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 348
E+ P G V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 563 AVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 611
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 110/284 (38%), Gaps = 37/284 (13%)
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFS 124
P LC V + L A+ T+E YA ITL P + P A + ++ F
Sbjct: 26 PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 85
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K L +SD F+V A + PPL + Q L+ KDL G F + G
Sbjct: 86 KTLMSSDAEYRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN-- 141
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
R L W F V GD+ +F+ R ++ EL+VGV R+Q ++ + + +S
Sbjct: 142 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGV----RRQRTLDKPLRTRRSRPP 197
Query: 244 GVLATASHAVATQTM-------FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMR 294
L A V F Y+ R +F++ E G+R + R
Sbjct: 198 TPLPVAVQEVIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEE--------GLRLRSR 249
Query: 295 FEGEDSPERRFSGTVVGVEDFSPHWKDSK-------WRSLKVQW 331
F E E ++ PH K + WRS+++ W
Sbjct: 250 FTPEMEVEFVWALEDGAPPSVGPHGKITAIHDTTWMWRSVEIGW 293
>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
Length = 381
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 254 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 312
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 313 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 343
>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
Length = 591
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 577 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 634
N + KVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E
Sbjct: 478 NANLYKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEN 536
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
D++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 537 DILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 568
>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
Length = 209
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 574 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTD 631
L R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D
Sbjct: 71 LKRMRTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKD 129
Query: 632 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
E D++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 130 HEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 164
>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 105 PTTPDPCPADSPRP----KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPT 160
P TP P D PR + H F K +T SD + ++HA C P LD++ ++P
Sbjct: 109 PVTPPNLPRDEPRESSPTREHLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPG 167
Query: 161 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 219
Q L +D+ G WRF++ + + ++LT GWS FV K+L AGD F RG N EL++
Sbjct: 168 QTLSFEDVSGKHWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226
>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
Length = 377
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 23/107 (21%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW-RFKHIF 179
H F K LTASDTSTHGGFSV R+ A +C PPL+ W RFK
Sbjct: 121 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRFKECK 162
Query: 180 RGQPRRHLL----TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
R R +++ TTG S FV K+LV+ D +FLRG+NGEL +GVR
Sbjct: 163 RTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVR 209
>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 109
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
F K L ASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFR
Sbjct: 31 FCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFR 88
>gi|293336069|ref|NP_001170351.1| uncharacterized protein LOC100384328 [Zea mays]
gi|224035287|gb|ACN36719.1| unknown [Zea mays]
Length = 326
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E D
Sbjct: 227 RTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDREND 285
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 669
++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 286 VLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 320
>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
Length = 412
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 8/123 (6%)
Query: 230 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVN-NKFA 286
S+PSSV+S+ +M + L A A +T+ V Y P S+F++ L+KY A+ ++ +
Sbjct: 36 SLPSSVLSANNMPIDALVVA----ANRTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLS 91
Query: 287 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSP 345
+G+R+ M FE + GT+VG+ D P W DS+W++++V+WD+P +P+RV
Sbjct: 92 IGLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRVCS 151
Query: 346 WEI 348
W+I
Sbjct: 152 WDI 154
>gi|294460143|gb|ADE75654.1| unknown [Picea sitchensis]
gi|294464227|gb|ADE77628.1| unknown [Picea sitchensis]
Length = 96
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
MF+I+G+L +K W++VYTD+EGDMMLVGDDPW EFC++V++IFI + ++V+KM+P
Sbjct: 1 MFNIEGELGNPSKGWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIFIYTREEVEKMTP 57
>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
Length = 690
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 108 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 167
P +D R + H F K +T SD + ++HA C P LD+ + P Q L +D
Sbjct: 184 PSTSASDFARNREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFED 242
Query: 168 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
+ G WRF++ + + ++ T GWS F+ K+L AGDT F RG N EL++ R
Sbjct: 243 VSGKHWRFRYSYWNSSQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFR 297
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 103 NEPTTPDPCPADSPRPKV---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTP 159
N P D P+ P+P + H F K +T SD + ++HA C P LD+ + P
Sbjct: 49 NPPNESDDPPSLPPKPTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVP 107
Query: 160 TQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 219
Q L +D+ G WRF++ + + ++ T WS F+ K+L AGDT F RG N EL++
Sbjct: 108 CQTLSFEDVSGKHWRFRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYI 167
Query: 220 GVR 222
R
Sbjct: 168 DFR 170
>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
Length = 120
Score = 82.8 bits (203), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 289 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 347
MR++MRFE ED+ ERR +G + G+ D P W SKWR L V+WD+ + R +RVSPWE
Sbjct: 1 MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEA-ARRNRVSPWE 59
Query: 348 IEPF-VASATPNLVQPVLAKNKRPRLSMEVPPLDLPS 383
IEP AS + NL+ L KR R+ M L+ P+
Sbjct: 60 IEPSGSASNSSNLMSAGL---KRTRIGMTSVKLEFPT 93
>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
Length = 170
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 10/107 (9%)
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFL-------RGENGELHVGVRCLARQQSSMPSSVIS 237
RHLLTTGWS FV++K LVAGD+ +F R E +L G+R Q+ MPSSV+S
Sbjct: 58 RHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNRNEKNQLLFGIRHAIWPQTVMPSSVLS 117
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFII-SLNKYLEAV 281
+ S+HLG+LA +HA AT + F ++Y PR S+F+I SL+ LE V
Sbjct: 118 TDSLHLGLLAAVAHAAATNSPFTIFYNPRACPSEFVIPSLSIMLEYV 164
>gi|297738134|emb|CBI27335.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 632
T +R+ KV G +VGR+LD+T Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 33 TPSRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDR 91
Query: 633 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
E D++L+GDDPW F N V I I S +DV+KM
Sbjct: 92 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 125
>gi|326487181|dbj|BAJ89575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 449
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
++R+ KV G +VGR+LD+T Y L +EL +MF I+GQL R+ W++V+ D E
Sbjct: 348 TSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRE 406
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
D++L+GDDPW F N V I I S +DV K+ P +
Sbjct: 407 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKLGKQGNDPRY 447
>gi|293332071|ref|NP_001169029.1| uncharacterized protein LOC100382863 [Zea mays]
gi|223974533|gb|ACN31454.1| unknown [Zea mays]
Length = 122
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 21 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 79
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM-SPGS 669
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 80 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 116
>gi|302761230|ref|XP_002964037.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
gi|300167766|gb|EFJ34370.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
Length = 113
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 637
R+ TKV G ++GRA+D+T Y L EL MF++ GQL ++ W++V+ D EGD++
Sbjct: 30 RTYTKVYKLG-SIGRAVDVTRFSNYTELRWELARMFNLDGQLDQKSGWQLVFIDHEGDIL 88
Query: 638 LVGDDPWHEFCNMVKRIFICSSQDV 662
LVGDDPW EF + V+ I I S +V
Sbjct: 89 LVGDDPWEEFVSSVRGIRILSPSEV 113
>gi|238013004|gb|ACR37537.1| unknown [Zea mays]
Length = 82
Score = 81.3 bits (199), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 612 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S
Sbjct: 1 MFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSA 60
Query: 671 LP 672
P
Sbjct: 61 AP 62
>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
Length = 354
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 35/264 (13%)
Query: 104 EPTTP-DPCPADSPRPKVH----SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQ 156
+P P DP P+ P+V SF K LT +D + ++ R+ A LP L +N+
Sbjct: 13 QPQAPADPGPSS---PQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNE 69
Query: 157 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENG 215
P L KD+HG EW + ++ H+L++GW F + RLV GD VF+R ++G
Sbjct: 70 HVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSG 124
Query: 216 ELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISL 274
E ++G+R R P SV V+ A + V Y + +F++
Sbjct: 125 ERYMGLR---RTLKPEPVSVDE-------VIEAVWRAARLEPFEVTYLSRQDGDEFVVPC 174
Query: 275 NKYLEAVNNKFAVGMRYKMRFEGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWD 332
A+ KF GM + E+ P G V+ +E+++ S WR ++V+W
Sbjct: 175 GIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWP 230
Query: 333 EPASITRPDRVSPWEIEPFVASAT 356
A + R V+ W+I + ++
Sbjct: 231 SCAGMNR--YVNFWQIREVLGESS 252
>gi|85069285|gb|ABC69714.1| ARF2-like protein [Nicotiana tabacum]
Length = 264
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 481 NNDTLLEQVETGRKTETGTSCRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISA 538
N+ +E G + G+ +LFG++++N + S S+ S ++ +
Sbjct: 99 NSKGNVESDVMGSQPTGGSKLKLFGVDILNGPESPSQHGSKLTHFGSFPAASKTVNFLEQ 158
Query: 539 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 598
+ + G SD +Q +SC TKV G A+GR++D++
Sbjct: 159 SKSTSGNSD-------------------TQCSRSC-------TKVLKYGCALGRSIDMSR 192
Query: 599 LVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
+ GY LI EL+++F +G L +K W + Y D EG+ L+GD PW + MV+++FIC
Sbjct: 193 VKGYGELISELDKLFGFEGSLLDGSKDWHVTYQDREGNTKLLGDYPWSDSQAMVRKMFIC 252
>gi|284811185|gb|ADB96331.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 183
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 6/70 (8%)
Query: 319 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 378
W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 1 WHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR------P 54
Query: 379 LDLPSAASAP 388
LPS A+ P
Sbjct: 55 PGLPSPATGP 64
>gi|168061668|ref|XP_001782809.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665711|gb|EDQ52386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 100
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 583 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 641
V QG VGR +DL YD L L +F+++GQL TK W++VYTD E D++LVGD
Sbjct: 1 VYQQG-KVGRTIDLRKCESYDGLRRVLANLFNLQGQLDDVTKGWQLVYTDHENDVLLVGD 59
Query: 642 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 677
DPW EFC V+ + I S QD + G ++P S E
Sbjct: 60 DPWEEFCGCVRSLKILSPQDAAGQTVG-RIPASSCE 94
>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
Length = 528
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 203 AGDTF-VFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 261
GD F VFL GE S S +S++S V+ +A+ A A Q VV
Sbjct: 15 GGDNFSVFLGGEMKSSGNTNNNTNSNGFSRNRSKVSAKS----VVESATLAAAGQPFEVV 70
Query: 262 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 317
YY PR S +F + A+ +++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 71 YY-PRASTPEFCVKAQAVDAALRVQWSAGMRFKMAFETEDSSRISWFMGTISSVQLADPV 129
Query: 318 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 373
W +S WR L+V WDEP + RVSPW +E V+S P + P K+ R++
Sbjct: 130 CWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-VVSSMPPIQLTPFTLPKKKLRVT 184
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 641
KV M+ VGR LDL+ Y+ L L +MF I+ +L + ++Y D +G + GD
Sbjct: 446 KVFMESEDVGRTLDLSLFSSYEQLYHRLAKMFGIE-ELELSNR--VLYKDTDGTVRHTGD 502
Query: 642 DPWHEFCNMVKRIFICSSQDVKKM 665
+P+ +F V+R+ I S M
Sbjct: 503 EPYRDFMKTVRRLTILSDSSSDNM 526
>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
Length = 407
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 20 RELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVV 77
R++W ACA P +P G V+YF GH Q L Q +P P LC V
Sbjct: 18 RDMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG---PRVFLCTVA 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTS 133
+ L A+ T+E YA+ITL P + P ++ F K L SD
Sbjct: 75 AVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFVKTLMISDFD 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
FS A PPL + Q L+ KDLHG F + +G +R L W
Sbjct: 135 FRIRFSAPMADAKGVFPPL--VDAKAVQPLLVKDLHGSPMTFDYGRKG--KRVTLAKVWK 190
Query: 194 TFVTSKRLVAGDTFVFL-----RGENGELHVGVR 222
F V GD+ +F+ ++GEL+VGVR
Sbjct: 191 KFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVR 224
>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F K +T SD + ++HA C P LD++ ++P Q L +D+ G WRF++ +
Sbjct: 163 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYW 221
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
+ ++LT GWS FV K+L AGD F RG + EL++ R
Sbjct: 222 NSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFR 263
>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
Length = 407
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 89/214 (41%), Gaps = 18/214 (8%)
Query: 20 RELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVV 77
R +W ACA P +P G V+YF GH Q L Q +P P LC V
Sbjct: 18 RAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG---PRVFLCTVA 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTS 133
+ L A+ T+E YA+ITL P + P ++ F K L SD
Sbjct: 75 AVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFVKTLMISDFD 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
FS A PPL + Q L+ KDLHG F + +G +R L W
Sbjct: 135 FRIRFSAPMADAKGVFPPL--VDAKAVQPLLVKDLHGSPMTFDYGRKG--KRVTLAKVWK 190
Query: 194 TFVTSKRLVAGDTFVFL-----RGENGELHVGVR 222
F V GD+ +F+ ++GEL+VGVR
Sbjct: 191 KFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVR 224
>gi|302759398|ref|XP_002963122.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
gi|300169983|gb|EFJ36585.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
Length = 289
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 637
RS TKV G ++GR+L++ Y L EL MF ++GQL + W++VY D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 638 LVGDDPWHEFCNMVKRIFICSSQDV 662
LVGDD W EF + V+ I I S +V
Sbjct: 241 LVGDDRWEEFVSSVRGIRIISPSEV 265
>gi|302796880|ref|XP_002980201.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
gi|300151817|gb|EFJ18461.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
Length = 289
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 637
RS TKV G ++GR+L++ Y L EL MF ++GQL + W++VY D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 638 LVGDDPWHEFCNMVKRIFICSSQDV 662
LVGDD W EF V+ I I S +V
Sbjct: 241 LVGDDRWEEFVTSVRGIRIISPSEV 265
>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
Length = 476
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 592 RALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFCN 649
R D+ GYD L +L MF I+GQL + W++VY D E D++LVGDDPW EF N
Sbjct: 362 RMRDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVN 421
Query: 650 MVKRIFICSSQDVKKMS 666
V+ I I SS +V++MS
Sbjct: 422 CVQSIKILSSAEVQQMS 438
>gi|224062579|ref|XP_002300855.1| predicted protein [Populus trichocarpa]
gi|222842581|gb|EEE80128.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDE 633
S R+ KV G + GR+LD++ YD L EL +F ++GQL R + W++V+ D E
Sbjct: 46 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGQLEDRQRSGWQLVFVDRE 104
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D++L+GDDPW EF N V I I S +V++M
Sbjct: 105 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 136
>gi|413934439|gb|AFW68990.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 510
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 591 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 389 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 448
Query: 649 NMVKRIFICSSQDVKKM 665
+ V I I S Q+V++M
Sbjct: 449 STVSCIKILSPQEVQQM 465
>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
Length = 317
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ + LW C GPL+ +P G +V YFPQGH EQ+ AST +E + IP+
Sbjct: 13 INQALWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQKEADFDIPIS----------- 61
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
HL A+QE DEV+AQ+TL P +P PD + + SFS+ LT+S S+
Sbjct: 62 --HLHADQENDEVFAQMTLQPFSQTADPFLLPD--FGIQTKQTIVSFSRTLTSSGESSPR 117
Query: 137 GFSVLRKH 144
+L +H
Sbjct: 118 PLLILPRH 125
>gi|297740767|emb|CBI30949.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 27 RTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 85
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++L+GDDPW EF N V I I S Q+V++M
Sbjct: 86 VLLLGDDPWPEFVNSVWCIKILSLQEVQQM 115
>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
Length = 496
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 138/344 (40%), Gaps = 58/344 (16%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 80 HLMAEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
L A+ T E YA I+LLP P A++ + ++K LT SD +
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANN 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P L+++ P E G R I PR
Sbjct: 140 GGGFSVPRLCADHIFPALNLDDDPPRPE---PHHGGPAGRLVGIPPHLPRH--------- 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
+ A D +R G + Q M + ++++
Sbjct: 188 ---AAPAPADDRVEQVRERQAAGGRGHGGVHVPQEVMEAVRLAAE--------------- 229
Query: 255 TQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR-FEGEDSPERRFS---GT 308
Q F V Y PR +F++ + + + + GM+ + + E ED+ RR + GT
Sbjct: 230 -QAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRLAWLNGT 286
Query: 309 VVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 350
+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 287 LTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 324
>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
Length = 533
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 646
+VGR+LD++ Y L EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 434 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 493
Query: 647 FCNMVKRIFICSSQDVKKM 665
F N V I I S +DV K+
Sbjct: 494 FVNNVWYIKILSPEDVLKL 512
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 289 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 347
MR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R RVS WE
Sbjct: 1 MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60
Query: 348 IEPFV 352
IEP
Sbjct: 61 IEPLT 65
>gi|302800377|ref|XP_002981946.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
gi|302802339|ref|XP_002982925.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300149515|gb|EFJ16170.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300150388|gb|EFJ17039.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
Length = 93
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
++GRA+D+ Y L EL MF + GQL R W++V+ D E D++LVGDDPW EF
Sbjct: 7 SIGRAVDVARFKNYVELRAELSRMFGLDGQLDQRNGWQLVFVDKENDLLLVGDDPWEEFV 66
Query: 649 NMVKRIFICSSQDV 662
+ V+ I I S +V
Sbjct: 67 SSVRGIRILSPSEV 80
>gi|224103213|ref|XP_002334077.1| predicted protein [Populus trichocarpa]
gi|222869513|gb|EEF06644.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 635
R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E D
Sbjct: 27 RTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREND 85
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
++L+GD PW EF N V I I S Q+V++M
Sbjct: 86 VLLLGDGPWPEFVNSVWCIKILSPQEVQQM 115
>gi|168053340|ref|XP_001779095.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669547|gb|EDQ56132.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 637
RS KV G ++ RA+D+ Y L EL MF++ GQL W++V+TD+E D++
Sbjct: 717 RSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPTVGWQLVFTDNEDDLL 775
Query: 638 LVGDDPWHEFCNMVKRIFICSSQDV 662
LVGDDPW EF V+ I I + +V
Sbjct: 776 LVGDDPWDEFVRNVRGIRILTPAEV 800
>gi|361069823|gb|AEW09223.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171017|gb|AFG68785.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171018|gb|AFG68786.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171019|gb|AFG68787.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171020|gb|AFG68788.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171021|gb|AFG68789.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171022|gb|AFG68790.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171023|gb|AFG68791.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171024|gb|AFG68792.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171025|gb|AFG68793.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171026|gb|AFG68794.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171027|gb|AFG68795.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171028|gb|AFG68796.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171029|gb|AFG68797.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171030|gb|AFG68798.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171031|gb|AFG68799.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171032|gb|AFG68800.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
Length = 89
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 4 RLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
RL S + + + + ELW ACAGPL+ +P++G V YFPQGH+EQ S Q Q++
Sbjct: 15 RLNSSEELALSKSSICMELWHACAGPLISLPRKGTLVVYFPQGHLEQASTSLKQ---QQM 71
Query: 64 PLFRLPSKILCRVVNIHL 81
+ LP +I CRV+N++L
Sbjct: 72 RPYELPPQIFCRVLNVNL 89
>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 42 YFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-- 98
+F + + +L +E++ +IP + LP +++C++ N+ + A+ TDEVYAQ+TL P
Sbjct: 31 FFHRAIVSRLLHQLIKEVDAQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPLS 90
Query: 99 EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQST 158
Q EP P S +P + F K LT S+ STHGGFS+ R+ A + PPLD +
Sbjct: 91 PEEQKEPFLPIELGGASKQP-TNYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQP 149
Query: 159 PT 160
P
Sbjct: 150 PC 151
>gi|170677558|gb|ACB30851.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 7 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLENPVRSGWQLVFVDRENDVLL 65
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM 665
+GDDPW EF + V I I S Q+V++M
Sbjct: 66 LGDDPWPEFVSSVWCIKILSPQEVQQM 92
>gi|224070983|ref|XP_002303315.1| predicted protein [Populus trichocarpa]
gi|222840747|gb|EEE78294.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 23/127 (18%)
Query: 566 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------- 614
ESQ+K + K+ M+GV +GR +DL Y+ L ++E+F
Sbjct: 204 ESQNKPAGTCKKGLFVKINMEGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSC 263
Query: 615 ------------IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
I G L ++++VY D+EGD MLVGD PWH F + VKR+ + S +V
Sbjct: 264 NGIMNKQEGEKAIMGVLDGSGEYKLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEV 323
Query: 663 KKMSPGS 669
++ GS
Sbjct: 324 SALNLGS 330
>gi|170677526|gb|ACB30835.1| ARF6, partial [Arabidopsis thaliana]
gi|170677528|gb|ACB30836.1| ARF6, partial [Arabidopsis thaliana]
gi|170677530|gb|ACB30837.1| ARF6, partial [Arabidopsis thaliana]
gi|170677532|gb|ACB30838.1| ARF6, partial [Arabidopsis thaliana]
gi|170677534|gb|ACB30839.1| ARF6, partial [Arabidopsis thaliana]
gi|170677536|gb|ACB30840.1| ARF6, partial [Arabidopsis thaliana]
gi|170677538|gb|ACB30841.1| ARF6, partial [Arabidopsis thaliana]
gi|170677540|gb|ACB30842.1| ARF6, partial [Arabidopsis thaliana]
gi|170677542|gb|ACB30843.1| ARF6, partial [Arabidopsis thaliana]
gi|170677544|gb|ACB30844.1| ARF6, partial [Arabidopsis thaliana]
gi|170677546|gb|ACB30845.1| ARF6, partial [Arabidopsis thaliana]
gi|170677548|gb|ACB30846.1| ARF6, partial [Arabidopsis thaliana]
gi|170677550|gb|ACB30847.1| ARF6, partial [Arabidopsis thaliana]
gi|170677552|gb|ACB30848.1| ARF6, partial [Arabidopsis thaliana]
gi|170677554|gb|ACB30849.1| ARF6, partial [Arabidopsis thaliana]
gi|170677556|gb|ACB30850.1| ARF6, partial [Arabidopsis thaliana]
gi|170677560|gb|ACB30852.1| ARF6, partial [Arabidopsis thaliana]
gi|170677562|gb|ACB30853.1| ARF6, partial [Arabidopsis thaliana]
gi|170677564|gb|ACB30854.1| ARF6, partial [Arabidopsis thaliana]
gi|170677566|gb|ACB30855.1| ARF6, partial [Arabidopsis thaliana]
gi|170677568|gb|ACB30856.1| ARF6, partial [Arabidopsis thaliana]
gi|170677570|gb|ACB30857.1| ARF6, partial [Arabidopsis thaliana]
gi|170677572|gb|ACB30858.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 638
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 7 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 65
Query: 639 VGDDPWHEFCNMVKRIFICSSQDVKKM 665
+GDDPW EF + V I I S Q+V++M
Sbjct: 66 LGDDPWPEFVSSVWCIKILSPQEVQQM 92
>gi|168059962|ref|XP_001781968.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666541|gb|EDQ53192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 139
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 637
RS KV G ++ RA+D+ Y L EL MF++ GQL + W++V+TD+E D++
Sbjct: 31 RSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPKVGWQLVFTDNEDDLL 89
Query: 638 LVGDDPWHEFCNMVKRIFICSSQDV 662
LVGDDPW EF V+ I I + +V
Sbjct: 90 LVGDDPWEEFVRNVRGIRILTPAEV 114
>gi|357513517|ref|XP_003627047.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355521069|gb|AET01523.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 271
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHL---IDEL-------------------EEMFDIKGQ 618
K+ M GV +GR +D+ Y+ L +D+L EE +KG
Sbjct: 158 VKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGS 217
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+ + GSK
Sbjct: 218 LTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSDLPAFNIGSK 269
>gi|226501382|ref|NP_001147149.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195607742|gb|ACG25701.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 624
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 116 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLAAQTSGPDGERQAVAGILNGGGE 175
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 176 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 217
>gi|356556539|ref|XP_003546582.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 320
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 23/113 (20%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKG 617
K+ M GV +GR +DL Y++L +DEL EE I G
Sbjct: 197 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 256
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + GSK
Sbjct: 257 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 309
>gi|304308209|gb|ADL70417.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 63
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 26/89 (29%)
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 295
IS+ M GV+A+ +A T+ MF V YKPR M+F
Sbjct: 1 ISANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQF 34
Query: 296 EGEDSPERRFSGTVVGVEDFSPHWKDSKW 324
EG+D E+R+ GT++GV D SPHWKDS+W
Sbjct: 35 EGKDFSEKRYDGTIIGVNDMSPHWKDSEW 63
>gi|359482888|ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-like [Vitis vinifera]
Length = 364
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 23/111 (20%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 618
K+ M GV +GR +DLT Y+ L +DEL EE I G
Sbjct: 241 KINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKHEEEKTITGL 300
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + GS
Sbjct: 301 LDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCLGS 351
>gi|295918075|gb|ADG60256.1| ARF8-like protein [Nicotiana tabacum]
Length = 119
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 589 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 646
GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D++L+GDDPW
Sbjct: 2 VCGRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEA 61
Query: 647 FCNMVKRIFICSSQDVKKMS 666
F N V I I S +DV+K+
Sbjct: 62 FVNNVWYIKILSPEDVQKLG 81
>gi|297743183|emb|CBI36050.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKG 617
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 240 VKINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKHEEEKTITG 299
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + GS
Sbjct: 300 LLDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCLGS 351
>gi|224085429|ref|XP_002307573.1| predicted protein [Populus trichocarpa]
gi|222857022|gb|EEE94569.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 633
S R+ KV G + GR+LD++ YD L EL +F ++G L R+ W++V+ D E
Sbjct: 50 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRE 108
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
D++L+GDDPW EF N V I I S +V
Sbjct: 109 NDVLLLGDDPWQEFVNNVWYIKILSPLEV 137
>gi|226531844|ref|NP_001150765.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195641652|gb|ACG40294.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 234
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 624
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 122 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLSAQTSGPGGERQAVAGILNGGGE 181
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 182 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 223
>gi|356550493|ref|XP_003543621.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 346
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----------------------IKG 617
K+ M GV +GR +DL Y++L ++E+F I G
Sbjct: 223 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 282
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + GSK
Sbjct: 283 LLDGSGEFTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 335
>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
Length = 262
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F K +T SD + ++HA C P LD++ + L +D+ G WRF++ +
Sbjct: 157 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 215
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
+ ++LT GWS FV K+L AGD F RG EL++ R
Sbjct: 216 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWR 257
>gi|302762190|ref|XP_002964517.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
gi|300168246|gb|EFJ34850.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
Length = 335
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 590 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 647
+GRALDL GY L++EL+ +F I L+ ++W+ VY D+EGDM+LVGDDPW F
Sbjct: 158 MGRALDLRKFRGYRELLEELQHLFGIDKNLNG-SEWQAVYVDNEGDMLLVGDDPWGVF 214
>gi|413944729|gb|AFW77378.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
Length = 234
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 624
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 122 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLSAQTSGPGGERQAVAGILNGGGE 181
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 182 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 223
>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 211 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM-FVVYYKPR--T 267
R N EL +GVR AR + S S + +A Q M F V Y PR +
Sbjct: 3 RNSNSELFIGVRRDARWNRNGERS---SSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGS 59
Query: 268 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKW 324
S F++ EA++ + GMR KM E EDS + F GTV V D P W+ S W
Sbjct: 60 SDFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLW 118
Query: 325 RSLKVQWDEPASITRPDRVSPWEIE 349
R L+V WDEP + RVSPW++E
Sbjct: 119 RMLQVTWDEPEVLQNVMRVSPWQVE 143
>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
Length = 261
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F K +T SD + ++HA C P LD++ + L +D+ G WRF++ +
Sbjct: 156 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 214
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
+ ++LT GWS FV K+L AGD F RG EL++ R
Sbjct: 215 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWR 256
>gi|255549816|ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
gi|223544864|gb|EEF46379.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
Length = 320
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 20/105 (19%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHL---IDEL-----------------EEMFDIKGQLHT 621
K+ M GV +GR +DL Y+ L +DEL EE I G L
Sbjct: 214 KINMDGVPIGRKVDLQAYDSYEKLSIAVDELFRGLLAAQRDSSAGTKQEEEKAITGVLDG 273
Query: 622 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++ +VY D+EGD MLVGD PWH F + VKR+ + S +V +S
Sbjct: 274 SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEVSALS 318
>gi|170677574|gb|ACB30859.1| ARF8, partial [Arabidopsis thaliana]
gi|170677576|gb|ACB30860.1| ARF8, partial [Arabidopsis thaliana]
gi|170677578|gb|ACB30861.1| ARF8, partial [Arabidopsis thaliana]
gi|170677580|gb|ACB30862.1| ARF8, partial [Arabidopsis thaliana]
gi|170677582|gb|ACB30863.1| ARF8, partial [Arabidopsis thaliana]
gi|170677584|gb|ACB30864.1| ARF8, partial [Arabidopsis thaliana]
gi|170677586|gb|ACB30865.1| ARF8, partial [Arabidopsis thaliana]
gi|170677588|gb|ACB30866.1| ARF8, partial [Arabidopsis thaliana]
gi|170677590|gb|ACB30867.1| ARF8, partial [Arabidopsis thaliana]
gi|170677592|gb|ACB30868.1| ARF8, partial [Arabidopsis thaliana]
gi|170677594|gb|ACB30869.1| ARF8, partial [Arabidopsis thaliana]
gi|170677596|gb|ACB30870.1| ARF8, partial [Arabidopsis thaliana]
gi|170677598|gb|ACB30871.1| ARF8, partial [Arabidopsis thaliana]
gi|170677600|gb|ACB30872.1| ARF8, partial [Arabidopsis thaliana]
gi|170677602|gb|ACB30873.1| ARF8, partial [Arabidopsis thaliana]
gi|170677604|gb|ACB30874.1| ARF8, partial [Arabidopsis thaliana]
gi|170677606|gb|ACB30875.1| ARF8, partial [Arabidopsis thaliana]
gi|170677608|gb|ACB30876.1| ARF8, partial [Arabidopsis thaliana]
gi|170677610|gb|ACB30877.1| ARF8, partial [Arabidopsis thaliana]
gi|170677612|gb|ACB30878.1| ARF8, partial [Arabidopsis thaliana]
gi|170677614|gb|ACB30879.1| ARF8, partial [Arabidopsis thaliana]
gi|170677616|gb|ACB30880.1| ARF8, partial [Arabidopsis thaliana]
gi|170677618|gb|ACB30881.1| ARF8, partial [Arabidopsis thaliana]
gi|170677620|gb|ACB30882.1| ARF8, partial [Arabidopsis thaliana]
Length = 130
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 575 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 631
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 42 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 101
Query: 632 DEGDMMLVGDDPWHEFCNMVKRIFICS 658
E D++L+GDDPW F N V I I S
Sbjct: 102 KENDILLLGDDPWESFVNNVWYIKILS 128
>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 216
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 65/176 (36%)
Query: 182 QPRRHLLTTGWS--TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
QPR HL+T GWS T V+ K L + D +FL
Sbjct: 66 QPRWHLITIGWSILTIVSQKNLTSCDVVLFL----------------------------- 96
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 299
A+HA +F+I KY+ ++ N +G R+ MRFE D
Sbjct: 97 ---------ATHA----------------EFVIPYEKYITSIRNPICIGTRFIMRFEMND 131
Query: 300 SPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASIT-RPDRVSPWEIEPFVA 353
SPE R +G V GV D P+ W +SKW D + ++ +RVS WEI+P V+
Sbjct: 132 SPE-RCAGVVAGVYDLDPYRWPNSKWC------DGMSLVSDHQERVSLWEIDPSVS 180
>gi|147798046|emb|CAN73899.1| hypothetical protein VITISV_004904 [Vitis vinifera]
Length = 559
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKGQ 618
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 393 KINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKQEEEKTITGL 452
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-----PGSKLP- 672
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + P S +P
Sbjct: 453 LDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCREFFDPHSLIPH 512
Query: 673 MFSIEG 678
+F + G
Sbjct: 513 IFGLNG 518
>gi|168037231|ref|XP_001771108.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677641|gb|EDQ64109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 632
+S R+ TKV G +VGR+LD+ Y L EL +MF + + + W+IV+ D+
Sbjct: 27 SSQRTFTKVHKLG-SVGRSLDVRIFNTYAELRKELAKMFHLDCLMEDPPTSGWQIVFVDN 85
Query: 633 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
E D +L+GDDPW +F N V+ I I S +V ++S
Sbjct: 86 ENDTLLLGDDPWEDFLNCVRSIKILSPSEVTQIS 119
>gi|297808601|ref|XP_002872184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318021|gb|EFH48443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 147
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 565 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 624
KE K+ K+ M+GV +GR ++L+ Y L ++++F K +
Sbjct: 39 KEEMKKRESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ 98
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ +VY D EGD +LVGD PW F + VKR+ + + + +SP
Sbjct: 99 YTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSNASSLSP 141
>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 152 LDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVF 209
LD P + ++AKD+HG W+F+HI+RG PRRHLL TGWS FV K G F
Sbjct: 13 LDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLCF 70
>gi|15219761|ref|NP_171949.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
gi|11131318|sp|Q38830.1|IAA12_ARATH RecName: Full=Auxin-responsive protein IAA12; AltName:
Full=Indoleacetic acid-induced protein 12; AltName:
Full=Protein BODENLOS
gi|12083206|gb|AAG48762.1|AF332398_1 auxin-induced protein, IAA12 [Arabidopsis thaliana]
gi|972927|gb|AAC49053.1| IAA12 [Arabidopsis thaliana]
gi|2494122|gb|AAB80631.1| Match to Arabidopsis IAA12 (gb|U18414) [Arabidopsis thaliana]
gi|17529012|gb|AAL38716.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|20465451|gb|AAM20185.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|332189592|gb|AEE27713.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
Length = 239
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 539 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 598
A + DG+ + K E K ++V+PK KV M GV +GR +D+
Sbjct: 95 AEEGDGEKKVVKN-DELKDVSMKVNPK---------VQGLGFVKVNMDGVGIGRKVDMRA 144
Query: 599 LVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIVYTDDEGDMMLVGDDPWHE 646
Y++L LEEMF + G L + + + Y D EGD MLVGD PW
Sbjct: 145 HSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRM 204
Query: 647 FCNMVKRIFICSSQDVKKMSP 667
F N VKR+ I + + ++P
Sbjct: 205 FINSVKRLRIMGTSEASGLAP 225
>gi|297843264|ref|XP_002889513.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
gi|297335355|gb|EFH65772.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIV 628
KV M GV +GR +D+ Y++L LEEMF + G L + + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTSREKVKPLRLLDGSSDFVLT 186
Query: 629 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
Y D EGD MLVGD PW F N VKR+ I S + ++P
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGSSEASGLAP 225
>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 259 FVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGV 312
F V Y PR S F++ A+ + GMR KM E EDS F GTV G+
Sbjct: 25 FDVVYYPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTGL 84
Query: 313 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 359
D S W+ S WR L++ WDEP + RVSPW++E FVA+ TP L
Sbjct: 85 PD-SGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVE-FVAT-TPQL 128
>gi|357454777|ref|XP_003597669.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355486717|gb|AES67920.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 269
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD------------------------IKG 617
K+ M GV +GR +DL YD+L ++++F I G
Sbjct: 151 KINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITG 210
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + G++
Sbjct: 211 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTLGTR 263
>gi|304322550|gb|ADL70762.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322562|gb|ADL70768.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322568|gb|ADL70771.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322572|gb|ADL70773.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 174
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 82 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 141
Query: 641 DDPWHEFCNMVKRIFICSSQDVKKMSP 667
D PW F + VKR+ + + +SP
Sbjct: 142 DVPWEMFVSTVKRLHVLKTSHAFSLSP 168
>gi|304322554|gb|ADL70764.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 158
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 641 DDPWHEFCNMVKRIFICSSQDVKKMSP 667
D PW F + VKR+ + + +SP
Sbjct: 126 DVPWEMFVSTVKRLHVLKTSHAFSLSP 152
>gi|297605239|ref|NP_001056915.2| Os06g0166500 [Oryza sativa Japonica Group]
gi|75252070|sp|Q5VRR0.1|IAA20_ORYSJ RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|55296040|dbj|BAD67602.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|55296147|dbj|BAD67865.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|125596172|gb|EAZ35952.1| hypothetical protein OsJ_20255 [Oryza sativa Japonica Group]
gi|215734885|dbj|BAG95607.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676750|dbj|BAF18829.2| Os06g0166500 [Oryza sativa Japonica Group]
Length = 183
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 551 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 610
E K+++ V P + ++ KV+M+G+A+GR LDL+ L Y L+D L
Sbjct: 71 EMGNKRRKLVGWPPVKCLHRRRDGGCGGGYVKVKMEGLAIGRKLDLSILGSYAELLDTLH 130
Query: 611 EMFDIKGQ--LHTRTK---WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
MF Q H R + + + Y D EGD M VGD PW F VKR+ I
Sbjct: 131 LMFPSTNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKI 181
>gi|125554220|gb|EAY99825.1| hypothetical protein OsI_21816 [Oryza sativa Indica Group]
Length = 183
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTK---WEIVYTDDEGDM 636
KV+M+G+A+GR LDL+ L Y L+D L MF Q H R + + + Y D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 637 MLVGDDPWHEFCNMVKRIFI 656
MLVGD PW F VKR+ I
Sbjct: 162 MLVGDVPWEAFAKSVKRLKI 181
>gi|18420964|ref|NP_568478.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
gi|11131406|sp|Q9XFM0.1|IAA28_ARATH RecName: Full=Auxin-responsive protein IAA28; AltName:
Full=Indoleacetic acid-induced protein 28
gi|4929493|gb|AAD34019.1|AF149816_1 IAA28 [Arabidopsis thaliana]
gi|23306354|gb|AAN17404.1| putative protein [Arabidopsis thaliana]
gi|25084149|gb|AAN72186.1| putative protein [Arabidopsis thaliana]
gi|49616373|gb|AAT67083.1| IAA28 [Arabidopsis thaliana]
gi|110736579|dbj|BAF00255.1| IAA28 [Arabidopsis thaliana]
gi|284794587|gb|ADB93666.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794589|gb|ADB93667.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794591|gb|ADB93668.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322548|gb|ADL70761.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322560|gb|ADL70767.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322566|gb|ADL70770.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322570|gb|ADL70772.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|332006115|gb|AED93498.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
Length = 175
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 641 DDPWHEFCNMVKRIFICSSQDVKKMSP 667
D PW F + VKR+ + + +SP
Sbjct: 143 DVPWEMFVSTVKRLHVLKTSHAFSLSP 169
>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
Length = 274
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 114 DSPRP--------KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE--- 162
DS RP K H F KV+T SD + ++HA P LD + +
Sbjct: 13 DSERPRGGVAWVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGG 72
Query: 163 -----LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 216
L +D G WRF++ + + +++T GWS FV KRL AGDT +F RG GE
Sbjct: 73 GKGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAGGE 131
>gi|224099985|ref|XP_002311698.1| predicted protein [Populus trichocarpa]
gi|222851518|gb|EEE89065.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 26/167 (15%)
Query: 522 PVSSLTTEGHIISTISAAADSD---GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 578
P+ + + +A A+ D G+ DI+K+ +KK + S S +
Sbjct: 83 PIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKK-----ICNGNKTSAPSNEKGHL 137
Query: 579 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK------ 624
KV M G+ +GR +DL Y+ L LEEMF I G+ TK
Sbjct: 138 GFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKRQVTKPSKLLD 197
Query: 625 ----WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ + Y D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 198 GLSEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLAP 244
>gi|168044918|ref|XP_001774926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|16610209|dbj|BAB71766.1| IAA/AUX protein [Physcomitrella patens]
gi|162673673|gb|EDQ60192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 568 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR--- 622
Q K + +S+ + K+ M GV GR +DL T YD L LE+MF I GQ
Sbjct: 367 QRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRSS 426
Query: 623 -------------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
+++ ++Y D EGD MLVGD PW F N VKR+ I +
Sbjct: 427 SSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQV 486
Query: 664 KMSPGSKLP 672
++P + P
Sbjct: 487 NLAPKNADP 495
>gi|351722464|ref|NP_001236733.1| uncharacterized protein LOC100305535 [Glycine max]
gi|255625835|gb|ACU13262.1| unknown [Glycine max]
Length = 189
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 73/181 (40%), Gaps = 8/181 (4%)
Query: 505 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 564
G+E+ P ++P + + + S I A D + S + K + V P
Sbjct: 7 GLEITTELRLGLPGGELPGKNEKIKKRVFSEIQAHDDDENSSSEQDRKIQTKNQVVGWPP 66
Query: 565 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 624
S K++ + + KV M G R +DL GY L+ LE+ F G
Sbjct: 67 VCSYRKKNTVNETKMYVKVSMDGAPFLRKIDLAMHKGYSELVLALEKFFGCYGIREALKD 126
Query: 625 WE-----IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK--KMSPGSKLPMFSIE 677
E +Y D +GD MLVGD PW F KR+ I D K + P L F IE
Sbjct: 127 AENAEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKGSDAKGFDLQPKGSLKGF-IE 185
Query: 678 G 678
G
Sbjct: 186 G 186
>gi|16610207|dbj|BAB71765.1| IAA/AUX protein [Physcomitrella patens]
Length = 484
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 568 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR--- 622
Q K + +S+ + K+ M GV GR +DL T YD L LE+MF I GQ
Sbjct: 348 QRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRSS 407
Query: 623 -------------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
+++ ++Y D EGD MLVGD PW F N VKR+ I +
Sbjct: 408 SSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQV 467
Query: 664 KMSPGSKLP 672
++P + P
Sbjct: 468 NLAPKNADP 476
>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 264 KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF-----SGTVVGVEDFSP- 317
+ +S+F I NK+L++++ F+ GMR+KM FE ED+ ERRF +G + GV + P
Sbjct: 27 RASSSEFTIPFNKFLKSLDQSFSSGMRFKMCFETEDAAERRFAIHGYTGIITGVSELDPA 86
Query: 318 HWKDSKWRSLKVQW 331
W SKW+ L V W
Sbjct: 87 RWPGSKWKCLLVSW 100
>gi|21593621|gb|AAM65588.1| putative auxin-induced protein, IAA12 [Arabidopsis thaliana]
Length = 239
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIV 628
KV M GV +GR +D+ Y++L LEEMF + G L + + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLT 186
Query: 629 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
Y D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAP 225
>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
Length = 409
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + Q L +D G WRF++
Sbjct: 90 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYS 148
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 149 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 182
>gi|118484337|gb|ABK94046.1| unknown [Populus trichocarpa]
Length = 303
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 534 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR----TKVQMQGVA 589
S +S A + + D K EK + + + K ++ T N KV M GV
Sbjct: 137 SLVSQAKAARAEED--KGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVP 194
Query: 590 VGRALDLTTLVGYDHLIDELEEMF--------DIKGQ---------LHTRTKWEIVYTDD 632
+GR +DL Y+ L LEEMF I GQ L +++ + Y D
Sbjct: 195 IGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQKPLSKFSKLLDGSSEFVLTYEDK 254
Query: 633 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 255 EGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 289
>gi|365818545|gb|AEX00361.1| IAA19 [Solanum lycopersicum]
Length = 192
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 565 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG---QLHT 621
K S + + ++N+ KV M G R +DL+T GYD L+ LE++FD G L
Sbjct: 72 KNSFNGREAESNNKMYVKVSMDGAPFLRKVDLSTHKGYDQLVMALEKLFDCYGIGEALED 131
Query: 622 RTKWEIV--YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
K E V Y D +GD MLVGD PW F KR+ I + K + G++
Sbjct: 132 ADKSEFVPIYEDKDGDWMLVGDVPWIMFSESCKRLRIMKRSEAKVIGLGAR 182
>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
Length = 249
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 19/193 (9%)
Query: 84 EQETDEVYAQITLLPEPSQNEPTTPDPCPADS-PRPKVHSFSKVLTASDTSTHGGFSVLR 142
++E + +Y Q L + P+ S + H F KVLT SD V +
Sbjct: 21 QEEDNNLYKQQRALGQDLHRRQGVSGGGPSHSHGVEREHMFDKVLTPSDVGKLNRLVVPK 80
Query: 143 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 202
+HA P + +L +D G W+F++ + G + +++T GWS FV + RL
Sbjct: 81 QHAERFFPA----AGAGSTQLCFQDRGGALWQFRYSYWGSSQSYVMTKGWSRFVRAARLA 136
Query: 203 AGDTFVFLRGENGELHVGVRCLARQQSSMPSS--------------VISSQSMHLGVLAT 248
AGDT F R G + R R++ + S VI + +M+ G
Sbjct: 137 AGDTVTFSRSGGGRYFIEYRHCQRRRRDVDISFGDAATVPAWPRPIVIGTAAMNNGGATV 196
Query: 249 ASHAVATQTMFVV 261
AS +A + V
Sbjct: 197 ASATIAGHDIEVA 209
>gi|312282513|dbj|BAJ34122.1| unnamed protein product [Thellungiella halophila]
Length = 249
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 549 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 608
A+E +E +++V+ + +K++ KV M GVA+GR +DL Y++L
Sbjct: 102 AREEEEAGKKKVKDDETKDVTKKANGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQT 161
Query: 609 LEEMF--------DIKGQ-------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 653
LE+MF + GQ L +++ + Y D EGD MLVGD PW F VKR
Sbjct: 162 LEDMFFRNNPGTIGLTGQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFITSVKR 221
Query: 654 IFICSSQDVKKMS 666
+ + + + ++
Sbjct: 222 LRVMKTSEANGLA 234
>gi|302398571|gb|ADL36580.1| ARF domain class transcription factor [Malus x domestica]
Length = 325
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKG 617
K+ M GV +GR +DL Y L +DEL EE +I G
Sbjct: 207 VKINMDGVPIGRKVDLGAYDSYQKLSSAVDELFRGLLAAQRESCNGGTKNKQEEEKEITG 266
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ +
Sbjct: 267 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAL 314
>gi|110736486|dbj|BAF00211.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 58
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 34/39 (87%)
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 674
+MLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M
Sbjct: 1 IMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRML 39
>gi|304308205|gb|ADL70415.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 59
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 26/84 (30%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 300
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 301 PERRFSGTVVGVEDFSPHWKDSKW 324
E+++ GT++GV D SPHWKDS+W
Sbjct: 36 SEKKYDGTIIGVNDMSPHWKDSEW 59
>gi|224107521|ref|XP_002314509.1| predicted protein [Populus trichocarpa]
gi|222863549|gb|EEF00680.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 550 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSR----TKVQMQGVAVGRALDLTTLVGYDHL 605
K EK + + + K ++ T N KV M GV +GR +DL Y+ L
Sbjct: 124 KGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVPIGRKVDLNAHACYETL 183
Query: 606 IDELEEMF--------DIKGQ---------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 648
LEEMF I GQ L +++ + Y D EGD MLVGD PW F
Sbjct: 184 AQALEEMFFRSTTTINSIGGQKPLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFL 243
Query: 649 NMVKRIFICSSQDVKKMSP 667
VKR+ I + + ++P
Sbjct: 244 TSVKRLRIMRTSEANGLAP 262
>gi|225432228|ref|XP_002275515.1| PREDICTED: auxin-responsive protein IAA31 [Vitis vinifera]
gi|297736834|emb|CBI26035.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---------IKGQLHTRTKWEIVYTDD 632
KV M+G+++GR LDL GYD L+ L MF + G H+ + Y D
Sbjct: 109 KVYMEGISIGRKLDLFAYSGYDGLVATLSHMFKTTIFCSDPHVGGADHSGKYHILTYEDK 168
Query: 633 EGDMMLVGDDPWHEFCNMVKRIFI 656
EGD M+VGD PW F VKR+ I
Sbjct: 169 EGDWMMVGDVPWEMFLTTVKRLKI 192
>gi|225437764|ref|XP_002281145.1| PREDICTED: auxin-responsive protein IAA4 [Vitis vinifera]
gi|297744081|emb|CBI37051.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------DIKGQLHTRTKWEIVYTDDEG 634
KV M+G+ +GR LDL GY LI L+ MF ++ G LH+ + Y D EG
Sbjct: 88 KVYMEGIPIGRKLDLFAHDGYHALIRTLDHMFSTTILWAEVDGVLHSEKCHVLTYEDKEG 147
Query: 635 DMMLVGDDPWHEFCNMVKRIFI 656
D M+VGD PW F VKR+ I
Sbjct: 148 DWMMVGDVPWELFLTTVKRLKI 169
>gi|302398577|gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
Length = 306
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 522 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 581
P+S+ + +A A+ D + + ++ K+ ++++ V K + ++ L
Sbjct: 138 PISAARMNSLVNQAKTARAEDD--TAVGEKSKDTSKKKINVGSKTTVKEKGHL----GFV 191
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQ----------LHTRTKWE 626
KV M G+ +GR +DL Y+ L LEEMF I G L +++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTTIGGDTEQAKKPSKLLDGSSEFV 251
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAP 292
>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
AltName: Full=Protein NGATHA 4
gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
Length = 333
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KVLT SD + ++HA E PL+ NQ+ + +D +G WRF++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 90
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ +++T GWS FV K+L AGDT F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>gi|399894421|gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
Length = 306
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 522 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 581
P+S+ + +A A+ D + + ++ K+ ++++ V K + ++ L
Sbjct: 138 PISAARMNSLVNQAKTARAEDD--TAVGEKSKDTSKKKINVGSKTTVKEKGHL----GFV 191
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQ----------LHTRTKWE 626
KV M G+ +GR +DL Y+ L LEEMF I G L +++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTAIGGDTEQAKKPSKLLDGSSEFV 251
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAP 292
>gi|357134358|ref|XP_003568784.1| PREDICTED: auxin-responsive protein IAA16-like [Brachypodium
distachyon]
Length = 239
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------------------------- 613
K+ M GV +GR +DL GY L D ++ +F
Sbjct: 112 VKINMDGVPIGRKVDLKAHGGYGKLADAVDHLFRGLLAAQRDVNPAIAVGQSSCAGEKNT 171
Query: 614 -DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
I G L ++ +VY DDEGD MLVGD PW F KR+ + S D+ S
Sbjct: 172 AAITGLLDGSGEYTLVYEDDEGDQMLVGDVPWDMFVATAKRLRVLRSSDLNASS 225
>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
Length = 328
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KVLT SD + ++HA E PL+ NQ+ + +D +G WRF++ +
Sbjct: 29 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 85
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ +++T GWS FV K+L AGDT F RG
Sbjct: 86 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 117
>gi|30685642|ref|NP_850205.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|38503400|sp|Q38831.2|IAA13_ARATH RecName: Full=Auxin-responsive protein IAA13; AltName:
Full=Indoleacetic acid-induced protein 13
gi|29028860|gb|AAO64809.1| At2g33310 [Arabidopsis thaliana]
gi|110742999|dbj|BAE99393.1| auxin regulated protein [Arabidopsis thaliana]
gi|330253719|gb|AEC08813.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 247
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 626
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 672
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 238
>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
Length = 404
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG----ENGELHVGVRCLARQQSSMPSS 234
+ + +++T GWS FV KRL AGDT F RG L + R + S P
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHR 201
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKP 265
++ +H+ LA+ ++ P
Sbjct: 202 MLPRLPLHMPPLASPYGYGPWGGGAGGFFVP 232
>gi|15225833|ref|NP_180889.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|186504957|ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|12083208|gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana]
gi|972929|gb|AAC49054.1| IAA13 [Arabidopsis thaliana]
gi|2459414|gb|AAB80649.1| auxin regulated protein (IAA13) [Arabidopsis thaliana]
gi|21537404|gb|AAM61745.1| auxin regulated protein IAA13 [Arabidopsis thaliana]
gi|330253718|gb|AEC08812.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|330253720|gb|AEC08814.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 246
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 626
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 672
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 237
>gi|218187663|gb|EEC70090.1| hypothetical protein OsI_00719 [Oryza sativa Indica Group]
Length = 237
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 21/101 (20%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT----------------- 623
K+ M GV +GR +DLT GY L ++++F +G L ++
Sbjct: 120 VKINMDGVPIGRKVDLTAYGGYAQLSAAVDKLF--RGLLAAQSAAADGEADAAAAGEMVG 177
Query: 624 --KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
++ +VY DDEGD MLVGD PW F KR+ + S D+
Sbjct: 178 GGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 218
>gi|304322701|gb|ADL70803.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 151
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 68 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 127
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 128 VGDIPWDMFLETVRRLKI 145
>gi|298108643|gb|ADB93684.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 155
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 74 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 133
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 134 VGDIPWDMFLETVRRLKI 151
>gi|23308285|gb|AAN18112.1| At3g17600/MKP6_15 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|304322695|gb|ADL70800.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322711|gb|ADL70808.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 157
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 74 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 133
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 134 VGDIPWDMFLETVRRLKI 151
>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
Length = 253
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KVLT SD V ++HA P + +L +D G W+F++ +
Sbjct: 55 HMFDKVLTPSDVGKLNRLVVPKQHAERFFPA-----AGAGTQLCFQDCGGALWQFRYSYW 109
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENG 215
G + +++T GWS FV + RL AGDT F RG G
Sbjct: 110 GSSQSYVMTKGWSRFVRAARLAAGDTVTFSRGAGG 144
>gi|297834672|ref|XP_002885218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331058|gb|EFH61477.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCAFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|304322699|gb|ADL70802.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
Length = 1203
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 213 ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQF 270
E L GVR RQQ+S+PSSV+S+ S+H+GVLA SHA A ++ F ++Y PR S+F
Sbjct: 500 EQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRACPSKF 559
Query: 271 IISLN 275
I S N
Sbjct: 560 ISSAN 564
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 605 LIDE--LEEMFDIKGQLHTR--TKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 652
L++E +E M ++ L+ + W++VY D E D++LVGDDPW+ ++++
Sbjct: 985 LVNEKAIECMLGVEDVLNDEKGSSWKMVYVDYENDVLLVGDDPWNTMGSILQ 1036
>gi|304322697|gb|ADL70801.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|15229074|ref|NP_188387.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
gi|46395870|sp|Q8H174.2|IAA31_ARATH RecName: Full=Auxin-responsive protein IAA31; AltName:
Full=Indoleacetic acid-induced protein 31
gi|9294148|dbj|BAB02050.1| unnamed protein product [Arabidopsis thaliana]
gi|15810012|gb|AAL06933.1| AT3g17600/MKP6_15 [Arabidopsis thaliana]
gi|49616379|gb|AAT67086.1| IAA31 [Arabidopsis thaliana]
gi|298108635|gb|ADB93680.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108639|gb|ADB93682.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108641|gb|ADB93683.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322703|gb|ADL70804.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322705|gb|ADL70805.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322707|gb|ADL70806.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322709|gb|ADL70807.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322713|gb|ADL70809.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322715|gb|ADL70810.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322717|gb|ADL70811.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322719|gb|ADL70812.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|332642452|gb|AEE75973.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|298108637|gb|ADB93681.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 138
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 638
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 55 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 114
Query: 639 VGDDPWHEFCNMVKRIFI 656
VGD PW F V+R+ I
Sbjct: 115 VGDIPWDMFLETVRRLKI 132
>gi|304322556|gb|ADL70765.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 164
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 79 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 138
Query: 641 DDPWHEFCNMVKRIFICSS 659
D PW F + VKR+ + +
Sbjct: 139 DVPWEMFVSTVKRLHVLKT 157
>gi|326530302|dbj|BAJ97577.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 556 KQEQVQVSPKESQSKQSCLTSNRS--RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 613
K+ V P S ++C KV+ +G A+GR +DL+ Y L+ L MF
Sbjct: 71 KKALVGWPPVSSARSRACGAGGGGGRHVKVRKEGAAIGRKVDLSLHGSYADLLATLARMF 130
Query: 614 -DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
D G LH ++ + Y D +GD MLVGD PW +F VKR+ I
Sbjct: 131 PDPAGCLHAESEMVVTYEDADGDWMLVGDVPWDDFARSVKRLKI 174
>gi|304322558|gb|ADL70766.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 149
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 64 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 123
Query: 641 DDPWHEFCNMVKRIFICSS 659
D PW F + VKR+ + +
Sbjct: 124 DVPWEMFVSTVKRLHVLKT 142
>gi|284794585|gb|ADB93665.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794593|gb|ADB93669.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 168
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 641 DDPWHEFCNMVKRIFICSS 659
D PW F + VKR+ + +
Sbjct: 143 DVPWEMFVSTVKRLHVLKT 161
>gi|304322552|gb|ADL70763.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322564|gb|ADL70769.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 151
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 640
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 641 DDPWHEFCNMVKRIFICSS 659
D PW F + VKR+ + +
Sbjct: 126 DVPWEMFVSTVKRLHVLKT 144
>gi|110631502|gb|ABG81096.1| AUX/IAA-like protein [Pelargonium x hortorum]
Length = 192
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 536 ISAAADSDG-KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRAL 594
S A D D K+ I+ K + QV P S++S + N KV + G R +
Sbjct: 39 FSEAIDIDKTKTSISGSAKSPPKTQVVGWPPVKASRKSVVARNCKYVKVAVDGAPYLRKV 98
Query: 595 DLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIV--------YTDDEGDMMLVGDDP 643
DL Y L++ LEE+F I+ L+ R ++V Y D +GD MLVGD P
Sbjct: 99 DLEMYGSYQQLLEALEELFSCLTIRNCLNERKLMDLVNGVEYVPTYEDKDGDWMLVGDVP 158
Query: 644 WHEFCNMVKRIFICSSQDVKKMSP 667
W F KR+ + S D ++P
Sbjct: 159 WKMFVESCKRVRLMKSSDAVGLAP 182
>gi|356545900|ref|XP_003541371.1| PREDICTED: auxin-responsive protein IAA11-like [Glycine max]
Length = 380
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHTR 622
KV M G+ +GR +DL+ Y+ L LE+MF+ I G+ H++
Sbjct: 258 KVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERHSK 317
Query: 623 -----TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+K+ + Y D EGD MLVGD PW F + V+R+ I + + ++P
Sbjct: 318 LLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAP 367
>gi|429326560|gb|AFZ78620.1| hypothetical protein [Populus tomentosa]
Length = 291
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 522 PVSSLTTEGHIISTISAAADSD---GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 578
P+ + + +A A+ D G+ DI+K+ +KK + S S +
Sbjct: 83 PIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKK-----ICNGNKTSAPSNEKGHL 137
Query: 579 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK------ 624
KV M G+ +GR +DL Y+ L LEEMF I G+ TK
Sbjct: 138 GFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFLRSATTINSIGGEKRQVTKPSKLLD 197
Query: 625 ----WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
+ + Y D EGD MLVGD PW F N VKR+ I + + +
Sbjct: 198 GLSEFVLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLG 243
>gi|356536854|ref|XP_003536948.1| PREDICTED: auxin-responsive protein IAA11 [Glycine max]
Length = 373
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHTR 622
KV M G+ +GR +DL+ Y+ L LE+MF+ I G+ H++
Sbjct: 251 KVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGFIIGGERHSK 310
Query: 623 -----TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+K+ + Y D EGD MLVGD PW F + V+R+ I + + ++P
Sbjct: 311 LLDGSSKFVLTYEDKEGDWMLVGDVPWGMFFSSVRRLRIMRTSEANGLAP 360
>gi|449436896|ref|XP_004136228.1| PREDICTED: auxin-responsive protein IAA18-like [Cucumis sativus]
gi|449502842|ref|XP_004161758.1| PREDICTED: auxin-responsive protein IAA18-like [Cucumis sativus]
Length = 358
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 59/132 (44%), Gaps = 26/132 (19%)
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL---IDEL- 609
E +E VQ E+ SK S + + KV M GV +GR L+L YD L IDEL
Sbjct: 225 ESSKETVQ---DENGSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELF 281
Query: 610 -------------------EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 650
EE + H + +VY D+EGD MLVGD PW F +
Sbjct: 282 HSLLAAQRNYLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVST 341
Query: 651 VKRIFICSSQDV 662
VKR+ + S V
Sbjct: 342 VKRLRVLKSSVV 353
>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
[Brachypodium distachyon]
Length = 213
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA P LD ++ L ++ G WRF++
Sbjct: 3 KEHMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDFDKGNGGIILSFEERGGKAWRFRYS 61
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL+AGD +F RG
Sbjct: 62 YWNSSQSYVMTKGWSRFVKDKRLLAGDAVLFARG 95
>gi|242087139|ref|XP_002439402.1| hypothetical protein SORBIDRAFT_09g005830 [Sorghum bicolor]
gi|241944687|gb|EES17832.1| hypothetical protein SORBIDRAFT_09g005830 [Sorghum bicolor]
Length = 242
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------------IKGQLHTRT- 623
KV M GV +GR LDL GYD L ++ +F I G L+
Sbjct: 126 VKVNMDGVPIGRKLDLGAHAGYDTLSAAVDHLFRGLLAAQASGSGGEQQPIAGILNGGGG 185
Query: 624 ---KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 186 GGREYTLVYEDDEGDQMLVGDVPWPMFIASARRLRVLRSSDLNPSS 231
>gi|23343944|gb|AAN16891.1| auxin-responsive factor protein [Mirabilis jalapa]
Length = 137
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 578 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 635
R+ KV G + GR+LD++ Y L EL +F ++ +L R+ ++V+ D E D
Sbjct: 52 RTFVKVHKMG-SFGRSLDISQFSSYQELRSELARLFGLENELKDSPRSGSQLVFVDREND 110
Query: 636 MMLVGDDPWHEFCNMVKRIFICSSQDV 662
++L+GDDPW EF V I I S Q+V
Sbjct: 111 VLLLGDDPWQEFVKTVGHIRILSPQEV 137
>gi|302763986|ref|XP_002965414.1| hypothetical protein SELMODRAFT_167506 [Selaginella moellendorffii]
gi|300166228|gb|EFJ32834.1| hypothetical protein SELMODRAFT_167506 [Selaginella moellendorffii]
Length = 409
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 555 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 614
K+ ++ + S Q+ +SN KV M G+ +GR +DL + Y L L++MF
Sbjct: 272 KQAAELATPDQGSNGGQAAASSNSLFVKVYMDGLPIGRKVDLDSNNSYVKLSSALKDMFS 331
Query: 615 --IKGQLHTR---------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
+ GQ ++ T++ + Y D +GD+MLVGD PW F VKR+ I
Sbjct: 332 GFVSGQPMSKQKSSGDVRSLFDGYETEYVLTYEDKDGDLMLVGDVPWRMFAATVKRLRIM 391
Query: 658 SSQDV 662
D
Sbjct: 392 KGSDA 396
>gi|125559895|gb|EAZ05343.1| hypothetical protein OsI_27548 [Oryza sativa Indica Group]
Length = 246
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR------------TKWE 626
KV ++G AVGR +DL YD L L+ MF + + TR ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+VY D+EGD MLVGD PW F VKR++I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|115474429|ref|NP_001060811.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|88911333|sp|P0C128.1|IAA25_ORYSJ RecName: Full=Auxin-responsive protein IAA25; AltName:
Full=Indoleacetic acid-induced protein 25
gi|113622780|dbj|BAF22725.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|125597174|gb|EAZ36954.1| hypothetical protein OsJ_21291 [Oryza sativa Japonica Group]
gi|215687000|dbj|BAG90814.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR------------TKWE 626
KV ++G AVGR +DL YD L L+ MF + + TR ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+VY D+EGD MLVGD PW F VKR++I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|294462071|gb|ADE76589.1| unknown [Picea sitchensis]
Length = 86
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Query: 621 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS 675
+ T +++YTD+E DMMLVGDDPW EFCN+ +I I + +V+KM+P MFS
Sbjct: 2 SNTGPQVLYTDNEDDMMLVGDDPWQEFCNIACKILIYTHDEVQKMTPS----MFS 52
>gi|224142858|ref|XP_002324753.1| predicted protein [Populus trichocarpa]
gi|222866187|gb|EEF03318.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 564 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF---------- 613
PKE S + N K+ M+GV +GR ++L Y+ L ++E+F
Sbjct: 108 PKEGSSLKPDSFRNDLFVKINMEGVPIGRKINLNAYDSYEKLSVAIDELFRGLLAETADP 167
Query: 614 --DIK--------GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
D K G + ++ +VY D+EGD +LVGD PWH F + KR+ + S ++
Sbjct: 168 RNDKKVKEANANAGSVSGSGEYTLVYEDNEGDRILVGDVPWHMFVSTAKRLRVLKSTEI 226
>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
Length = 420
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 96 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYS 154
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 155 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|226504822|ref|NP_001149993.1| LOC100283620 [Zea mays]
gi|195635913|gb|ACG37425.1| IAA6 - auxin-responsive Aux/IAA family member [Zea mays]
gi|414880576|tpg|DAA57707.1| TPA: IAA6-auxin-responsive Aux/IAA family member isoform 1 [Zea
mays]
gi|414880577|tpg|DAA57708.1| TPA: IAA6-auxin-responsive Aux/IAA family member isoform 2 [Zea
mays]
Length = 357
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 566 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ----- 618
E+ K+ K+ M G+ +GR +DL Y+ L ++E+F ++ Q
Sbjct: 222 EASRKEKPACKKNPLVKINMDGIPIGRKVDLAAYDSYERLSLGVKELFHGFLQAQKDMSP 281
Query: 619 ---------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 669
L ++ +VY D+EGD MLVGD PW+ F + KR+ + S ++ K G+
Sbjct: 282 TAGKIFSQLLDGSGEYTLVYEDNEGDRMLVGDVPWNVFVSTAKRLRVLRSSELAKGLVGT 341
Query: 670 KLPMFSI 676
+ P ++
Sbjct: 342 RPPQIAV 348
>gi|356522896|ref|XP_003530078.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 219
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 37/127 (29%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIK------------------- 616
K+ M GVA+GR +D+ Y+ L ++E+F ++K
Sbjct: 91 VKINMDGVAIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIASSQCCSGQRDSCAG 150
Query: 617 -------------GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
G L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+
Sbjct: 151 GIQNKEQEEKSNTGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLP 210
Query: 664 KMSPGSK 670
+ GSK
Sbjct: 211 AFTLGSK 217
>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
+ H F KVLT SD + ++HA P L+ NQ+ + +D +G WRF++
Sbjct: 30 REHMFDKVLTPSDVGKLNRLVIPKQHAENYFP-LEGNQNGTVLDF--QDRNGKMWRFRYS 86
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV K+L AGDT F RG
Sbjct: 87 YWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFHRG 120
>gi|242075446|ref|XP_002447659.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
gi|241938842|gb|EES11987.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
Length = 74
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 288 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKV 329
G+R++MRFEGE++ ERRF+GT+V E+ P W DS WR LKV
Sbjct: 15 GVRFRMRFEGEEALERRFTGTIVRCENLDPLWPDSSWRYLKV 56
>gi|195635917|gb|ACG37427.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 618
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|297821108|ref|XP_002878437.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
gi|297324275|gb|EFH54696.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
Length = 172
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 570 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRT 623
+ C + KV M+GV +GR +DL +L GY LI L+ MF+ + ++ +
Sbjct: 74 QNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEEMCSEK 133
Query: 624 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 134 SHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>gi|365818553|gb|AEX00365.1| IAA26 [Solanum lycopersicum]
Length = 287
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD------------------------IKG 617
K+ M G+ +GR +DL Y L ++++F I G
Sbjct: 172 KINMDGIPIGRKVDLKAYDSYHKLSSAVDQLFRGLVAAQNDSSAGGNNEKKEDEEKAISG 231
Query: 618 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ ++ +K
Sbjct: 232 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSTLTRATK 284
>gi|363806854|ref|NP_001242293.1| uncharacterized protein LOC100811879 [Glycine max]
gi|255642213|gb|ACU21371.1| unknown [Glycine max]
Length = 187
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 10/180 (5%)
Query: 505 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 564
G+E+ P ++P + + + S I+ D + S+ ++ + K Q V P
Sbjct: 7 GLEITTELRLGLPGGELPDKNEKMKKRVFSEINQG-DENSSSEEDRKIQTKNQ-VVGWPP 64
Query: 565 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 624
S K++ + + KV M G R +DL GY L LE+ F G
Sbjct: 65 VCSYRKKNTINETKMYVKVSMDGAPFLRKIDLAMRKGYSELALALEKFFGCYGIGSALKD 124
Query: 625 WEIV-----YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGF 679
E V Y D +GD MLVGD PW F KR+ I D K P P S++GF
Sbjct: 125 EENVVQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDPQ---PKGSLKGF 181
>gi|357139461|ref|XP_003571300.1| PREDICTED: auxin-responsive protein IAA25-like [Brachypodium
distachyon]
Length = 245
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQLHTRTKWE--------- 626
KV ++G AVGR ++L GY L L+ MF D G++ TR E
Sbjct: 146 VKVNLEGYAVGRKINLAAHSGYASLSAALQSMFHGFLSDGYGRIATRDDEEDQLGMMIKN 205
Query: 627 --IVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
++Y D+EGD MLVGD PW F VKR++I
Sbjct: 206 YILLYEDNEGDRMLVGDVPWEMFIASVKRLYIA 238
>gi|302822822|ref|XP_002993067.1| hypothetical protein SELMODRAFT_187180 [Selaginella moellendorffii]
gi|300139159|gb|EFJ05906.1| hypothetical protein SELMODRAFT_187180 [Selaginella moellendorffii]
Length = 344
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ-----------LHTRTK--- 624
KV M GV +GR ++L T Y+ L LEEMF I GQ L + TK
Sbjct: 224 VKVYMDGVPIGRKVNLRTHSSYERLSGALEEMFRRFISGQSGAGKAVAKDKLVSDTKKFN 283
Query: 625 ------WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ + Y D +GD+MLVGD PW F VKR+ I + ++P
Sbjct: 284 FIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGLAP 332
>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
Length = 259
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYS 94
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG----ENGELHVGVRC 223
+ + +++T GWS FV KRL AGDT F RG L + RC
Sbjct: 95 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRC 143
>gi|195637724|gb|ACG38330.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 624
KV M GV +GR LDL GYD L ++ +F + G L
Sbjct: 115 VKVNMDGVPIGRKLDLAAHAGYDTLSAAVDSLFRGLFAAQAAGPGGEQQAVAGILSGGGG 174
Query: 625 WE--IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
E +VY DDEGD MLVGD PW F +R+ + S D+
Sbjct: 175 GEHTLVYEDDEGDQMLVGDVPWPMFVATARRLRVLKSSDL 214
>gi|226508838|ref|NP_001145863.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
gi|219884739|gb|ACL52744.1| unknown [Zea mays]
gi|413949356|gb|AFW82005.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 624
KV M GV +GR LDL GYD L ++ +F + G L
Sbjct: 115 VKVNMDGVPIGRKLDLAAHAGYDTLSAAVDSLFRGLFAAQAAGPGGEQQAVAGILSGGGG 174
Query: 625 WE--IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
E +VY DDEGD MLVGD PW F +R+ + S D+
Sbjct: 175 GEHTLVYEDDEGDQMLVGDVPWPMFVATARRLRVLKSSDL 214
>gi|357139129|ref|XP_003571137.1| PREDICTED: auxin-responsive protein IAA7-like [Brachypodium
distachyon]
Length = 274
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 22/103 (21%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHL---IDEL-------------------EEMFDIKGQL 619
K+ M G+ +GR +DLT L Y+ L +D+L +E+ I G L
Sbjct: 156 KINMDGIPIGRKIDLTALDSYEKLCVAVDKLFRHLLAAQNDPPAAGTECTQEVVAISGLL 215
Query: 620 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 216 DGTGEYTLVYEDYEGDRVLVGDIPWGMFVSSVKRLRVLKTSDL 258
>gi|296083735|emb|CBI23724.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 532 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 588
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 114 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 170
Query: 589 AVGRALDLTTLVGYDHLIDELEEMF------------DI-KGQ-------LHTRTKWEIV 628
+GR +DL Y L LE+MF D+ KGQ L +++ +
Sbjct: 171 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPPIRSDVEKGQSTNPSKLLDGSSEFVLT 230
Query: 629 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
Y D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 231 YEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 269
>gi|302788514|ref|XP_002976026.1| hypothetical protein SELMODRAFT_450582 [Selaginella moellendorffii]
gi|300156302|gb|EFJ22931.1| hypothetical protein SELMODRAFT_450582 [Selaginella moellendorffii]
Length = 410
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 555 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 614
K+ ++ + S Q+ ++N KV M G+ +GR +DL + Y L L++MF
Sbjct: 273 KQAAELATPDQGSNGGQAAASNNSLFVKVYMDGLPIGRKVDLDSNNSYVKLSSALKDMFS 332
Query: 615 --IKGQLHTR---------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 657
+ GQ ++ T++ + Y D +GD+MLVGD PW F VKR+ I
Sbjct: 333 GFVSGQPMSKQKSSGDVRSLFDGYETEYVLTYEDKDGDLMLVGDVPWRMFAATVKRLRIM 392
Query: 658 SSQDV 662
D
Sbjct: 393 KGSDA 397
>gi|323388567|gb|ADX60088.1| AUX/IAA transcription factor [Zea mays]
Length = 289
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 618
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|223943565|gb|ACN25866.1| unknown [Zea mays]
gi|413936690|gb|AFW71241.1| IAA7-auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 618
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
P K H F KV+T SD + ++HA P LD + + L +D +G WRF
Sbjct: 46 PPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRF 104
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 105 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 141
>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Vitis vinifera]
Length = 461
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KV+T SD + ++HA + P LD + S L +D G WRF++ +
Sbjct: 137 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 195
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSVISS 238
+ +++T GWS FV K+L AGD F R GE+G+ + + R + P+S+
Sbjct: 196 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL--- 252
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVN 282
+HL S +V ++ + P S + + +++ +N
Sbjct: 253 SHLHLPTQLPFSQSVRWGRLYSLPQSPSMSMNMPQGHDHMQQLN 296
>gi|15228681|ref|NP_191769.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
gi|46396010|sp|Q9M1R4.1|IAA30_ARATH RecName: Full=Auxin-responsive protein IAA30; AltName:
Full=Indoleacetic acid-induced protein 30
gi|6899920|emb|CAB71870.1| auxin-induced protein homolog [Arabidopsis thaliana]
gi|49616377|gb|AAT67085.1| IAA30 [Arabidopsis thaliana]
gi|225898739|dbj|BAH30500.1| hypothetical protein [Arabidopsis thaliana]
gi|284794605|gb|ADB93675.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794607|gb|ADB93676.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794609|gb|ADB93677.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794611|gb|ADB93678.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794613|gb|ADB93679.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322669|gb|ADL70787.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322671|gb|ADL70788.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322673|gb|ADL70789.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322675|gb|ADL70790.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322677|gb|ADL70791.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322679|gb|ADL70792.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322681|gb|ADL70793.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322683|gb|ADL70794.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322685|gb|ADL70795.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322687|gb|ADL70796.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322689|gb|ADL70797.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322691|gb|ADL70798.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322693|gb|ADL70799.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|332646789|gb|AEE80310.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
Length = 172
Score = 62.4 bits (150), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 570 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRT 623
+ C + KV M+GV +GR +DL +L GY LI L+ MF+ + + +
Sbjct: 74 QNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEK 133
Query: 624 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 134 SHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>gi|414872892|tpg|DAA51449.1| TPA: hypothetical protein ZEAMMB73_766126 [Zea mays]
Length = 271
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL 59
D L+ ELWKACAGPL VP GQ+VYY PQGH+EQ + +EL
Sbjct: 46 DALFVELWKACAGPLSCVPPLGQKVYYLPQGHIEQYRSIELEEL 89
>gi|297826783|ref|XP_002881274.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297327113|gb|EFH57533.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 626
KV M GVA+GR +DL+ Y++L LE+MF + Q L +++
Sbjct: 127 KVNMDGVAIGRKVDLSAHSSYENLSQTLEDMFFRTNPGTIGLTSQFTKPLRLLDGSSEFV 186
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 672
+ Y D EGD MLVGD PW F VKR+ + + + ++ ++ P
Sbjct: 187 LTYEDKEGDWMLVGDVPWRMFITSVKRLRVMKTSEANGLAARNQEP 232
>gi|351723637|ref|NP_001236774.1| uncharacterized protein LOC100305794 [Glycine max]
gi|255626619|gb|ACU13654.1| unknown [Glycine max]
Length = 217
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 37/127 (29%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------------------------- 613
K+ M GV +GR +D+ Y+ L ++E+F
Sbjct: 89 VKINMDGVPIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIGSSQCCSGQRDSCAG 148
Query: 614 ----------DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 663
KG L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+
Sbjct: 149 GIQNKEQEEKSNKGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLP 208
Query: 664 KMSPGSK 670
+ GSK
Sbjct: 209 AFTLGSK 215
>gi|326507026|dbj|BAJ95590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 168
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 515 SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 574
SAP+ V+ T ++ + + A+++ + + V +S
Sbjct: 26 SAPAVAFGVTKATLPLFLLRDDDGDDSGEDGTAGARDWGTSNKRKRLVGWPPVKSAHRPR 85
Query: 575 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 634
+ + KV+M+GV +GR +DL+ Y L L MF +H + + Y D +G
Sbjct: 86 SHHNGHVKVKMEGVPIGRMVDLSRHASYHELHHTLRLMFP-SSTVHHADPYAVTYEDGDG 144
Query: 635 DMMLVGDDPWHEFCNMVKRIFIC 657
D MLVGD PW EF KR+ I
Sbjct: 145 DWMLVGDVPWEEFSKSAKRLKIL 167
>gi|302766253|ref|XP_002966547.1| hypothetical protein SELMODRAFT_168183 [Selaginella moellendorffii]
gi|300165967|gb|EFJ32574.1| hypothetical protein SELMODRAFT_168183 [Selaginella moellendorffii]
Length = 431
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHT------------------ 621
KV M GV +GR +DL YD L LE+MF I GQ T
Sbjct: 320 KVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQNGTPEVSSIRDPGEKKLNFLQ 379
Query: 622 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
+ + + Y D +GD+MLVGD PW F VKR+ I + ++P K
Sbjct: 380 SSDFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLAPRDK 428
>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 86 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYS 144
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 145 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 178
>gi|302801263|ref|XP_002982388.1| hypothetical protein SELMODRAFT_179441 [Selaginella moellendorffii]
gi|300149980|gb|EFJ16633.1| hypothetical protein SELMODRAFT_179441 [Selaginella moellendorffii]
Length = 431
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHT------------------ 621
KV M GV +GR +DL YD L LE+MF I GQ T
Sbjct: 320 KVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQNGTPEVSSIRDPGEKKLNFLQ 379
Query: 622 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 670
+ + + Y D +GD+MLVGD PW F VKR+ I + ++P K
Sbjct: 380 SSDFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLAPRDK 428
>gi|242064546|ref|XP_002453562.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
gi|241933393|gb|EES06538.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
Length = 292
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 23/104 (22%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 618
K+ M G+ +GR +DL L YD L +D+L +E I G
Sbjct: 173 KINMDGIPIGRKIDLNALGSYDELSLSVDKLFRGLLAAQQDPLDASTKECSQEEVAISGL 232
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 233 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 276
>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 322
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYW 96
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ +++T GWS FV KRL AGDT F RG
Sbjct: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128
>gi|302780269|ref|XP_002971909.1| hypothetical protein SELMODRAFT_172524 [Selaginella moellendorffii]
gi|300160208|gb|EFJ26826.1| hypothetical protein SELMODRAFT_172524 [Selaginella moellendorffii]
Length = 345
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ-----------LHTRTK--- 624
KV M GV +GR + L T Y+ L LEEMF I GQ L + TK
Sbjct: 225 VKVYMDGVPIGRKVSLRTHSSYERLSGALEEMFRRFISGQSGAGKAVAKDKLVSDTKKFN 284
Query: 625 ------WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ + Y D +GD+MLVGD PW F VKR+ I + ++P
Sbjct: 285 FIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGLAP 333
>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
Length = 287
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|359477690|ref|XP_002285483.2| PREDICTED: auxin-responsive protein IAA13-like isoform 2 [Vitis
vinifera]
Length = 321
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 532 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 588
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 152 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 208
Query: 589 AVGRALDLTTLVGYDHLIDELEEMF------------DI-KGQ-------LHTRTKWEIV 628
+GR +DL Y L LE+MF D+ KGQ L +++ +
Sbjct: 209 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPPIRSDVEKGQSTNPSKLLDGSSEFVLT 268
Query: 629 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
Y D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 269 YEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 307
>gi|115435010|ref|NP_001042263.1| Os01g0190300 [Oryza sativa Japonica Group]
gi|75263885|sp|Q9LG86.1|IAA2_ORYSJ RecName: Full=Auxin-responsive protein IAA2; AltName:
Full=Indoleacetic acid-induced protein 2
gi|9049459|dbj|BAA99424.1| putative auxin-induced protein IAA18 [Oryza sativa Japonica Group]
gi|113531794|dbj|BAF04177.1| Os01g0190300 [Oryza sativa Japonica Group]
gi|125569344|gb|EAZ10859.1| hypothetical protein OsJ_00698 [Oryza sativa Japonica Group]
gi|215713409|dbj|BAG94546.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 238
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 21/101 (20%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT----------------- 623
K+ M GV +GR +DL GY L ++++F +G L ++
Sbjct: 121 VKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLF--RGLLAAQSAAADGEADAAAAGEMVG 178
Query: 624 --KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
++ +VY DDEGD MLVGD PW F KR+ + S D+
Sbjct: 179 GGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 219
>gi|255574879|ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
gi|223532214|gb|EEF34018.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
Length = 318
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK--------- 624
KV M G+ +GR +DL Y+ L LE+MF G+ TK
Sbjct: 201 KVNMDGIPIGRKVDLNAHASYETLAQTLEDMFFRSTPSINSTGGEKQQSTKPSKLLDGSS 260
Query: 625 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ + Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 261 EFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 304
>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
AltName: Full=Protein NGATHA3
gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
Length = 358
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
P K H F KV+T SD + ++HA P LD + + L +D +G WRF
Sbjct: 49 PPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRF 107
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 108 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
Length = 400
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
Length = 400
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|297824785|ref|XP_002880275.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
gi|297326114|gb|EFH56534.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
Length = 167
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 573 CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWE 626
C + KV M+GV +GR +DL +L GY LI L+ MF+ + +
Sbjct: 71 CHSVGSFYVKVNMEGVPIGRKIDLMSLNGYHDLIRTLDFMFNASILWAEEEDMCNEKSHV 130
Query: 627 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 656
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 131 LTYADKEGDWMMVGDVPWEMFLSTVRRLKI 160
>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
Length = 293
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
vinifera]
Length = 411
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSV 235
+ +++T GWS FV K+L AGD F R GE+G+ + + R + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|326517390|dbj|BAK00062.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 228
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHT 621
K+ M G+ +GR +DL Y L ++ +F+ I G L
Sbjct: 110 VKINMDGIPIGRKVDLKAHDSYGKLAAAVDHLFEGLLAAQRDESSCAGEKPAAITGLLDG 169
Query: 622 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 666
++ +VY DDEGD MLVGD PW F KR+ + S D+ S
Sbjct: 170 SGEYTLVYEDDEGDQMLVGDVPWDMFIATAKRLRVLRSSDLNASS 214
>gi|449465437|ref|XP_004150434.1| PREDICTED: auxin-induced protein 22B-like [Cucumis sativus]
gi|449519671|ref|XP_004166858.1| PREDICTED: auxin-induced protein 22B-like [Cucumis sativus]
Length = 186
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 556 KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 615
++ +QV K++++ + + KV M G R +DL+ GY L+ LE+MF
Sbjct: 69 RKNTLQV--KKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKALEDMFKF 126
Query: 616 K-GQLHTRTKWEI-----VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 668
GQ R ++ Y D +GD MLVGD PW F + KR+ I +V +S G
Sbjct: 127 TIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCG 185
>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
Length = 308
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 33 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYS 91
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 92 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 125
>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
[Brachypodium distachyon]
Length = 413
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 96 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 154
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 155 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|413924061|gb|AFW63993.1| hypothetical protein ZEAMMB73_893762 [Zea mays]
Length = 294
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 576 SNRSRT----KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQ 618
S + RT KV M+G +GR +DL Y L LE MF
Sbjct: 169 SKKGRTVGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMKPSIGLCTSSSSKTLKL 228
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
L + +++++ Y D +GD MLVGD PW F VKR+ I + D K + P
Sbjct: 229 LDSSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDAKGLGP 277
>gi|302398583|gb|ADL36586.1| ARF domain class transcription factor [Malus x domestica]
Length = 295
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------DIKGQ------LHTRTKW 625
KV M G+ +GR ++L+ Y+ L +LE+MF +++G L ++
Sbjct: 180 KVNMDGIPIGRKVNLSAHSSYEALAQKLEDMFGPSTHGSGGQEMEGATRPSKLLDGSFEF 239
Query: 626 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
+ Y D +GD MLVGD PW F VKR+ I + + ++P
Sbjct: 240 ALTYEDKDGDWMLVGDVPWEMFLGTVKRLRIMRTSEANGLAP 281
>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
Japonica Group]
gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 33 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYS 91
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 92 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 125
>gi|356503640|ref|XP_003520614.1| PREDICTED: auxin-responsive protein IAA13-like [Glycine max]
Length = 244
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-------KGQ---------------- 618
KV+M G+ +GR +DL Y+ L LE+MFD KG
Sbjct: 121 KVKMDGIPIGRKVDLGAHGSYETLAQTLEDMFDESATVLTHKGSNGEDHGTEVGADGHSK 180
Query: 619 -LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
LH + + Y D EGD MLVGD PW F N V+R+ I + + ++P
Sbjct: 181 LLHGSSDLVLTYEDKEGDWMLVGDVPWWMFLNSVRRLRIMRTPEANGLAP 230
>gi|226509392|ref|NP_001141156.1| hypothetical protein [Zea mays]
gi|194702982|gb|ACF85575.1| unknown [Zea mays]
gi|413924062|gb|AFW63994.1| hypothetical protein ZEAMMB73_893762 [Zea mays]
Length = 293
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 576 SNRSRT----KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQ 618
S + RT KV M+G +GR +DL Y L LE MF
Sbjct: 168 SKKGRTVGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMKPSIGLCTSSSSKTLKL 227
Query: 619 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
L + +++++ Y D +GD MLVGD PW F VKR+ I + D K + P
Sbjct: 228 LDSSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDAKGLGP 276
>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
Length = 316
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 106 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 164
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 165 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 198
>gi|449458912|ref|XP_004147190.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA13-like
[Cucumis sativus]
Length = 301
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 16/129 (12%)
Query: 554 EKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGVAVGRALDLTTLVGYDHLIDELE 610
E+K++Q K++ ++C + KV + GV +GR +DL Y+ L LE
Sbjct: 166 EEKKDQ----SKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLE 221
Query: 611 EMF------DIKGQ---LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 661
+MF K Q L +++ + Y D EGD MLVGD PW F N V+R+ I + +
Sbjct: 222 DMFFSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVNSVRRLRIMRTSE 281
Query: 662 VKKMSPGSK 670
++P S+
Sbjct: 282 ANGLAPRSQ 290
>gi|304322486|gb|ADL70730.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 171
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 635
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 636 MMLVGDDPWHEFCNMVKRIFI 656
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
Length = 505
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSV 235
+ +++T GWS FV K+L AGD F R GE+G+ + + R + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|15226476|ref|NP_182222.1| auxin-responsive protein IAA20 [Arabidopsis thaliana]
gi|11131099|sp|O24410.2|IAA20_ARATH RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|13194770|gb|AAK15547.1|AF348576_1 auxin-induced protein IAA20 [Arabidopsis thaliana]
gi|3522954|gb|AAC34236.1| auxin-induced protein (IAA20) [Arabidopsis thaliana]
gi|26449566|dbj|BAC41909.1| putative auxin-induced protein [Arabidopsis thaliana]
gi|330255689|gb|AEC10783.1| auxin-responsive protein IAA20 [Arabidopsis thaliana]
Length = 175
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 635
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 636 MMLVGDDPWHEFCNMVKRIFI 656
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
Length = 327
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA P LD + L +D G WRF++
Sbjct: 34 KEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYS 92
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 93 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 126
>gi|297707657|gb|ADB93651.2| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 173
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 635
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 636 MMLVGDDPWHEFCNMVKRIFI 656
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|320098853|gb|ADW10155.1| putative auxin-responsive protein IAA1 [Schiedea membranacea]
gi|320098855|gb|ADW10156.1| putative auxin-responsive protein IAA1 [Schiedea membranacea]
Length = 102
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 570 KQSCLTSNRS-RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR----TK 624
++SC S + KV M G R +DL Y+ L++ LE+MF+ K T T+
Sbjct: 5 RKSCFQSKPTILVKVSMDGAPYLRKIDLNLYKCYNELLNALEDMFNFKIGKETGNKDGTE 64
Query: 625 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 662
+E Y D +GD MLVGD PW F KR+ I ++
Sbjct: 65 YETTYEDKDGDWMLVGDVPWEMFTTSCKRLRIIKGSEL 102
>gi|255548896|ref|XP_002515504.1| ATP binding protein, putative [Ricinus communis]
gi|223545448|gb|EEF46953.1| ATP binding protein, putative [Ricinus communis]
Length = 895
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 576 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI--KGQLHTRTKWEIVYTDDE 633
SN KV+M+GVA+ R +DL Y L + L MF KG + T + + Y D +
Sbjct: 144 SNYKYVKVKMEGVAIARKIDLRLFHSYQTLTNFLISMFGKCEKGDDDSTTNYTLTYQDKD 203
Query: 634 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 677
GD +L GD PW F V+R+ + + + + S K P F +E
Sbjct: 204 GDWLLAGDVPWQTFMESVQRLELVRNGGLPRPSL-CKFPCFLME 246
>gi|359480055|ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-like [Vitis vinifera]
Length = 296
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----IKGQLHTR--------TKWEIV 628
KV M G+ +GR +DL+ Y+ L LEEMF + TR + + +
Sbjct: 184 KVNMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTTTVNAIESTRPSKLLDGSSDFVLT 243
Query: 629 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
Y D EGD MLVGD PW F +R+ I + D ++P
Sbjct: 244 YEDKEGDWMLVGDVPWGMFLGSARRLRIMRTSDANGLAP 282
>gi|304322484|gb|ADL70729.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 174
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 582 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 635
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 636 MMLVGDDPWHEFCNMVKRIFI 656
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|429326544|gb|AFZ78612.1| hypothetical protein [Populus tomentosa]
Length = 204
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 581 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTR-----TKWEIVYTDDEG 634
KV M G R +DL GY L++ +EEMF K G+ R +++ Y D +G
Sbjct: 110 VKVSMDGAPYLRKIDLKVYKGYPELLEVVEEMFKFKVGEYSEREGYNGSEYVPTYEDKDG 169
Query: 635 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 665
D MLVGD PW F N KR+ I + + +
Sbjct: 170 DWMLVGDVPWEMFINSCKRLRIMKESEARGL 200
>gi|225433277|ref|XP_002285481.1| PREDICTED: auxin-responsive protein IAA13-like isoform 1 [Vitis
vinifera]
Length = 314
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 532 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 588
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 153 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 209
Query: 589 AVGRALDLTTLVGYDHLIDELEEMF------------DIKGQLHTRTKWEIVYTDDEGDM 636
+GR +DL Y L LE+MF + L +++ + Y D EGD
Sbjct: 210 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPRQSTNPSKLLDGSSEFVLTYEDKEGDW 269
Query: 637 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 667
MLVGD PW F + VKR+ I + + ++P
Sbjct: 270 MLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 300
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,004,123,347
Number of Sequences: 23463169
Number of extensions: 471126925
Number of successful extensions: 1442881
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 937
Number of HSP's that attempted gapping in prelim test: 1435925
Number of HSP's gapped (non-prelim): 3592
length of query: 684
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 534
effective length of database: 8,839,720,017
effective search space: 4720410489078
effective search space used: 4720410489078
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)