Query 005678
Match_columns 683
No_of_seqs 335 out of 2530
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 12:05:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005678.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005678hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1151 Tousled-like protein k 100.0 9.9E-96 2E-100 770.1 35.9 477 203-680 229-746 (775)
2 KOG0615 Serine/threonine prote 100.0 1.3E-52 2.8E-57 443.0 15.0 270 400-681 169-443 (475)
3 KOG0575 Polo-like serine/threo 100.0 5.3E-50 1.2E-54 440.9 24.2 256 403-679 18-273 (592)
4 KOG0581 Mitogen-activated prot 100.0 6.5E-50 1.4E-54 419.8 19.6 264 400-681 76-341 (364)
5 KOG0605 NDR and related serine 100.0 2.6E-48 5.6E-53 422.0 29.5 269 400-681 138-451 (550)
6 KOG0598 Ribosomal protein S6 k 100.0 2.3E-48 5.1E-53 407.9 21.7 259 401-680 23-286 (357)
7 KOG0595 Serine/threonine-prote 100.0 2.4E-46 5.1E-51 396.0 21.6 259 403-681 10-274 (429)
8 KOG0616 cAMP-dependent protein 100.0 2.8E-46 6.1E-51 381.5 21.3 255 402-680 43-302 (355)
9 KOG0592 3-phosphoinositide-dep 100.0 6.6E-46 1.4E-50 403.0 21.0 263 403-681 73-344 (604)
10 KOG0593 Predicted protein kina 100.0 3.1E-46 6.6E-51 381.8 17.2 262 403-679 2-288 (396)
11 KOG0583 Serine/threonine prote 100.0 3E-45 6.5E-50 399.2 25.8 265 400-680 14-280 (370)
12 KOG0582 Ste20-like serine/thre 100.0 6.8E-45 1.5E-49 387.6 23.1 273 396-682 19-300 (516)
13 KOG0198 MEKK and related serin 100.0 5.1E-45 1.1E-49 386.1 20.3 262 403-681 17-282 (313)
14 KOG0591 NIMA (never in mitosis 100.0 5.8E-46 1.2E-50 376.6 9.9 248 403-669 19-275 (375)
15 KOG0661 MAPK related serine/th 100.0 3.3E-45 7.1E-50 392.5 16.1 265 400-681 7-297 (538)
16 KOG0578 p21-activated serine/t 100.0 1.5E-44 3.2E-49 395.2 19.4 258 403-682 273-530 (550)
17 KOG0192 Tyrosine kinase specif 100.0 6.3E-44 1.4E-48 386.7 24.1 259 398-674 36-298 (362)
18 cd07848 STKc_CDKL5 Catalytic d 100.0 2.2E-43 4.7E-48 366.8 26.9 261 403-678 1-287 (287)
19 cd05612 STKc_PRKX_like Catalyt 100.0 1.3E-43 2.9E-48 371.5 25.3 254 403-680 1-259 (291)
20 KOG0585 Ca2+/calmodulin-depend 100.0 2.3E-44 5E-49 385.5 19.4 273 402-680 96-377 (576)
21 cd05599 STKc_NDR_like Catalyti 100.0 9.5E-44 2.1E-48 383.8 24.0 265 403-680 1-301 (364)
22 cd05628 STKc_NDR1 Catalytic do 100.0 2.8E-43 6.1E-48 381.3 26.8 267 403-681 1-299 (363)
23 PTZ00263 protein kinase A cata 100.0 1.5E-43 3.3E-48 378.3 24.3 255 403-681 18-277 (329)
24 cd05631 STKc_GRK4 Catalytic do 100.0 3E-43 6.4E-48 367.4 25.8 259 405-681 2-267 (285)
25 KOG0610 Putative serine/threon 100.0 1.1E-43 2.3E-48 376.0 21.1 267 401-681 75-398 (459)
26 cd05626 STKc_LATS2 Catalytic d 100.0 3.7E-43 8E-48 383.0 25.7 265 404-680 2-310 (381)
27 KOG0597 Serine-threonine prote 100.0 4.6E-44 1E-48 388.3 18.3 255 403-680 2-256 (808)
28 cd05571 STKc_PKB Catalytic dom 100.0 2.3E-43 5E-48 375.7 23.1 252 409-681 1-257 (323)
29 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.6E-43 7.7E-48 375.2 24.3 258 403-680 1-262 (333)
30 KOG0588 Serine/threonine prote 100.0 8.9E-44 1.9E-48 392.9 19.7 256 404-680 13-268 (786)
31 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.9E-43 1.9E-47 370.4 26.3 267 404-681 1-296 (338)
32 cd06649 PKc_MEK2 Catalytic dom 100.0 1.6E-42 3.5E-47 370.5 28.0 262 400-680 2-306 (331)
33 cd05625 STKc_LATS1 Catalytic d 100.0 4.6E-43 9.9E-48 381.8 24.2 264 404-680 2-310 (382)
34 KOG0600 Cdc2-related protein k 100.0 1.1E-43 2.4E-48 383.0 18.9 266 401-680 115-405 (560)
35 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.8E-43 8.1E-48 376.0 22.8 265 403-680 1-290 (350)
36 KOG0659 Cdk activating kinase 100.0 2E-43 4.4E-48 356.1 19.4 263 403-681 2-287 (318)
37 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.3E-42 2.9E-47 363.1 26.2 259 403-678 5-288 (288)
38 cd05629 STKc_NDR_like_fungal C 100.0 5.2E-43 1.1E-47 380.7 23.8 265 403-680 1-310 (377)
39 cd05598 STKc_LATS Catalytic do 100.0 4.3E-43 9.3E-48 381.0 22.9 264 404-680 2-306 (376)
40 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.9E-42 4.2E-47 364.0 26.9 263 402-681 4-294 (303)
41 cd05585 STKc_YPK1_like Catalyt 100.0 9.7E-43 2.1E-47 368.9 23.7 250 411-681 1-253 (312)
42 PTZ00426 cAMP-dependent protei 100.0 1.4E-42 2.9E-47 373.9 24.8 260 398-681 25-290 (340)
43 KOG0694 Serine/threonine prote 100.0 7.2E-43 1.6E-47 388.3 23.0 260 400-681 365-630 (694)
44 KOG0660 Mitogen-activated prot 100.0 4.8E-43 1E-47 366.7 19.8 267 400-680 19-315 (359)
45 cd05596 STKc_ROCK Catalytic do 100.0 2.3E-42 4.9E-47 376.1 24.4 268 399-680 39-309 (370)
46 cd05595 STKc_PKB_beta Catalyti 100.0 2.7E-42 5.8E-47 367.8 24.3 251 409-680 1-256 (323)
47 cd05593 STKc_PKB_gamma Catalyt 100.0 3.2E-42 6.9E-47 368.3 24.1 252 409-681 1-257 (328)
48 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-42 3.3E-47 369.5 21.4 264 403-680 1-268 (330)
49 KOG0032 Ca2+/calmodulin-depend 100.0 4.2E-42 9.1E-47 375.2 25.1 262 399-681 31-299 (382)
50 cd05627 STKc_NDR2 Catalytic do 100.0 2.7E-42 5.9E-47 372.9 23.0 265 403-680 1-298 (360)
51 cd07862 STKc_CDK6 Catalytic do 100.0 8.4E-42 1.8E-46 355.4 25.4 259 403-678 1-290 (290)
52 cd06650 PKc_MEK1 Catalytic dom 100.0 9.1E-42 2E-46 365.5 26.3 263 400-681 2-305 (333)
53 cd05621 STKc_ROCK2 Catalytic d 100.0 5.2E-42 1.1E-46 373.6 24.1 269 399-681 39-310 (370)
54 cd05590 STKc_nPKC_eta Catalyti 100.0 6E-42 1.3E-46 364.7 24.0 252 409-681 1-259 (320)
55 cd05614 STKc_MSK2_N N-terminal 100.0 5.2E-42 1.1E-46 365.7 23.2 263 404-680 1-272 (332)
56 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-41 2.9E-46 362.1 25.8 256 404-680 1-262 (324)
57 KOG0033 Ca2+/calmodulin-depend 100.0 6.4E-44 1.4E-48 355.8 7.4 263 400-681 8-273 (355)
58 cd05584 STKc_p70S6K Catalytic 100.0 8.1E-42 1.7E-46 363.9 23.9 253 409-681 2-262 (323)
59 cd05605 STKc_GRK4_like Catalyt 100.0 2.1E-41 4.5E-46 353.5 26.5 260 404-681 1-267 (285)
60 KOG0201 Serine/threonine prote 100.0 1.1E-43 2.3E-48 378.3 9.0 260 402-683 12-271 (467)
61 cd05594 STKc_PKB_alpha Catalyt 100.0 3.9E-42 8.6E-47 366.2 21.1 253 409-681 1-258 (325)
62 cd05589 STKc_PKN Catalytic dom 100.0 1.4E-41 3E-46 361.9 24.9 255 405-681 1-263 (324)
63 KOG0580 Serine/threonine prote 100.0 1.2E-42 2.6E-47 346.3 15.1 258 402-682 21-280 (281)
64 PF00069 Pkinase: Protein kina 100.0 2.6E-41 5.7E-46 343.7 25.1 259 405-678 1-260 (260)
65 KOG0663 Protein kinase PITSLRE 100.0 3.1E-42 6.7E-47 356.4 18.3 263 403-680 76-366 (419)
66 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.2E-41 2.6E-46 363.5 23.3 259 398-674 2-329 (338)
67 cd05608 STKc_GRK1 Catalytic do 100.0 1.9E-41 4.1E-46 353.0 24.1 254 411-681 1-263 (280)
68 cd06625 STKc_MEKK3_like Cataly 100.0 6.4E-41 1.4E-45 342.5 27.3 262 403-678 2-263 (263)
69 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-41 2.9E-46 363.4 23.2 253 409-680 1-267 (329)
70 cd05591 STKc_nPKC_epsilon Cata 100.0 1.3E-41 2.9E-46 361.6 23.0 251 409-680 1-259 (321)
71 cd05616 STKc_cPKC_beta Catalyt 100.0 3E-41 6.6E-46 359.1 25.5 257 404-681 1-263 (323)
72 KOG0611 Predicted serine/threo 100.0 1.9E-42 4.2E-47 363.5 15.9 258 400-679 50-307 (668)
73 PHA03212 serine/threonine kina 100.0 2.2E-41 4.9E-46 371.6 25.1 257 401-681 90-382 (391)
74 cd07863 STKc_CDK4 Catalytic do 100.0 4.4E-41 9.6E-46 349.1 25.9 258 404-678 1-288 (288)
75 PLN00034 mitogen-activated pro 100.0 2E-41 4.4E-46 365.1 23.9 260 402-681 73-334 (353)
76 PTZ00284 protein kinase; Provi 100.0 2.4E-41 5.3E-46 378.8 25.2 261 399-680 125-443 (467)
77 KOG0612 Rho-associated, coiled 100.0 1.3E-42 2.8E-47 400.5 15.1 269 399-681 71-344 (1317)
78 cd05622 STKc_ROCK1 Catalytic d 100.0 3.6E-41 7.9E-46 366.9 25.3 270 397-680 37-309 (371)
79 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.1E-41 1.1E-45 354.2 25.4 262 403-681 6-292 (309)
80 PTZ00036 glycogen synthase kin 100.0 3.1E-41 6.7E-46 376.0 24.8 258 401-680 64-356 (440)
81 cd05575 STKc_SGK Catalytic dom 100.0 2.3E-41 5E-46 360.0 22.8 251 409-680 1-256 (323)
82 cd05618 STKc_aPKC_iota Catalyt 100.0 2.2E-41 4.7E-46 362.0 22.4 254 409-681 1-268 (329)
83 cd05592 STKc_nPKC_theta_delta 100.0 3.6E-41 7.9E-46 358.1 24.0 252 409-681 1-254 (316)
84 cd07876 STKc_JNK2 Catalytic do 100.0 6.5E-41 1.4E-45 361.7 25.7 261 401-680 19-320 (359)
85 cd05570 STKc_PKC Catalytic dom 100.0 5.2E-41 1.1E-45 356.9 24.2 252 409-681 1-258 (318)
86 cd07853 STKc_NLK Catalytic dom 100.0 6.7E-41 1.5E-45 363.6 24.8 263 405-681 2-294 (372)
87 cd05620 STKc_nPKC_delta Cataly 100.0 5.7E-41 1.2E-45 356.6 23.8 252 409-681 1-254 (316)
88 cd05619 STKc_nPKC_theta Cataly 100.0 8.6E-41 1.9E-45 355.5 24.6 252 409-681 1-254 (316)
89 cd07874 STKc_JNK3 Catalytic do 100.0 1E-40 2.2E-45 359.3 25.3 261 401-680 15-316 (355)
90 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-40 3.1E-45 354.6 25.8 257 404-681 1-263 (323)
91 KOG0599 Phosphorylase kinase g 100.0 5.2E-42 1.1E-46 346.3 13.7 264 403-679 17-287 (411)
92 cd05582 STKc_RSK_N N-terminal 100.0 2E-41 4.3E-46 359.5 18.7 250 409-680 2-259 (318)
93 cd05597 STKc_DMPK_like Catalyt 100.0 1.5E-40 3.2E-45 355.6 25.0 265 403-680 1-271 (331)
94 cd07875 STKc_JNK1 Catalytic do 100.0 2.7E-40 5.9E-45 357.5 27.0 261 401-680 22-323 (364)
95 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.1E-41 2E-45 356.7 22.9 253 409-681 1-266 (327)
96 cd05630 STKc_GRK6 Catalytic do 100.0 2E-40 4.2E-45 346.5 24.6 258 405-680 2-266 (285)
97 cd05604 STKc_SGK3 Catalytic do 100.0 6.3E-41 1.4E-45 357.0 21.2 251 409-680 1-256 (325)
98 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.1E-40 2.3E-45 357.2 23.0 262 401-681 13-304 (343)
99 cd05607 STKc_GRK7 Catalytic do 100.0 2.5E-40 5.4E-45 344.0 25.0 253 411-680 1-259 (277)
100 cd05632 STKc_GRK5 Catalytic do 100.0 4.5E-40 9.8E-45 343.5 26.7 260 404-681 1-267 (285)
101 PTZ00283 serine/threonine prot 100.0 3.5E-40 7.7E-45 372.9 27.9 263 400-680 29-302 (496)
102 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.8E-40 8.3E-45 345.9 26.2 263 403-682 6-293 (301)
103 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.9E-40 1.3E-44 336.6 26.7 264 404-678 1-267 (267)
104 cd05623 STKc_MRCK_alpha Cataly 100.0 2.8E-40 6.1E-45 353.3 25.1 265 403-681 1-272 (332)
105 cd05586 STKc_Sck1_like Catalyt 100.0 6.4E-41 1.4E-45 357.4 20.1 251 411-680 1-258 (330)
106 cd05602 STKc_SGK1 Catalytic do 100.0 1.4E-40 3E-45 354.4 22.3 251 409-680 1-256 (325)
107 cd08223 STKc_Nek4 Catalytic do 100.0 1.2E-39 2.6E-44 332.0 28.1 255 404-678 1-257 (257)
108 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-40 4.6E-45 352.0 23.2 251 409-680 1-256 (321)
109 KOG0579 Ste20-like serine/thre 100.0 7E-42 1.5E-46 373.3 11.7 262 402-681 31-295 (1187)
110 cd06631 STKc_YSK4 Catalytic do 100.0 1.1E-39 2.3E-44 334.7 26.8 264 404-678 1-265 (265)
111 KOG0197 Tyrosine kinases [Sign 100.0 4.3E-41 9.4E-46 366.9 17.4 255 395-673 198-455 (468)
112 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-40 4.6E-45 340.3 21.6 260 402-677 8-267 (267)
113 PTZ00266 NIMA-related protein 100.0 5.2E-40 1.1E-44 388.4 27.7 271 394-681 4-301 (1021)
114 cd07839 STKc_CDK5 Catalytic do 100.0 5.5E-40 1.2E-44 340.2 24.6 259 404-678 1-284 (284)
115 cd06619 PKc_MKK5 Catalytic dom 100.0 5.9E-40 1.3E-44 340.8 24.9 255 404-682 2-260 (279)
116 cd05624 STKc_MRCK_beta Catalyt 100.0 3.7E-40 8E-45 352.5 24.0 266 403-681 1-272 (331)
117 cd08529 STKc_FA2-like Catalyti 100.0 1.2E-39 2.5E-44 331.3 26.4 253 404-678 1-256 (256)
118 PTZ00267 NIMA-related protein 100.0 6.7E-40 1.5E-44 368.8 27.0 258 402-680 66-328 (478)
119 cd06646 STKc_MAP4K5 Catalytic 100.0 3.3E-40 7.1E-45 338.9 22.3 260 402-677 8-267 (267)
120 KOG0658 Glycogen synthase kina 100.0 4.3E-41 9.4E-46 352.6 15.8 258 402-681 23-312 (364)
121 KOG0594 Protein kinase PCTAIRE 100.0 1.3E-40 2.8E-45 348.9 19.2 263 404-681 12-308 (323)
122 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-39 2.5E-44 337.5 26.2 259 404-678 1-285 (285)
123 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-39 3E-44 334.9 26.5 263 404-680 3-266 (266)
124 cd07847 STKc_CDKL1_4 Catalytic 100.0 1E-39 2.3E-44 337.6 25.8 261 403-678 1-286 (286)
125 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-39 2.3E-44 334.4 25.2 267 404-679 1-268 (268)
126 cd06637 STKc_TNIK Catalytic do 100.0 7.2E-40 1.6E-44 336.8 24.0 259 401-678 4-272 (272)
127 cd06609 STKc_MST3_like Catalyt 100.0 8E-40 1.7E-44 337.7 24.4 259 403-683 1-259 (274)
128 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-39 2.5E-44 342.5 25.9 260 401-682 18-277 (296)
129 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-39 2.4E-44 344.6 25.9 260 403-681 1-293 (308)
130 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.3E-39 2.8E-44 335.4 25.7 266 404-678 2-272 (272)
131 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8.7E-40 1.9E-44 339.5 24.5 262 403-681 1-268 (286)
132 cd06626 STKc_MEKK4 Catalytic d 100.0 2.3E-39 4.9E-44 330.7 27.1 264 404-678 1-264 (264)
133 cd05580 STKc_PKA Catalytic dom 100.0 1.8E-39 3.9E-44 339.1 26.8 254 403-680 1-259 (290)
134 cd05574 STKc_phototropin_like 100.0 2.1E-39 4.6E-44 342.2 27.5 266 403-682 1-296 (316)
135 cd06643 STKc_SLK Catalytic dom 100.0 1.2E-39 2.6E-44 338.2 25.1 260 404-681 6-268 (282)
136 cd06644 STKc_STK10_LOK Catalyt 100.0 1.6E-39 3.4E-44 339.4 26.1 264 400-681 9-275 (292)
137 PHA03209 serine/threonine kina 100.0 8.2E-40 1.8E-44 353.9 24.6 253 402-680 65-356 (357)
138 cd08227 PK_STRAD_alpha Pseudok 100.0 6.8E-40 1.5E-44 349.1 23.1 267 407-682 2-314 (327)
139 cd07868 STKc_CDK8 Catalytic do 100.0 1.3E-39 2.9E-44 343.9 25.1 255 408-678 6-317 (317)
140 cd06655 STKc_PAK2 Catalytic do 100.0 2.6E-39 5.7E-44 340.2 27.0 260 401-682 17-276 (296)
141 KOG1187 Serine/threonine prote 100.0 3.1E-40 6.7E-45 358.9 20.3 262 395-674 67-347 (361)
142 cd06652 STKc_MEKK2 Catalytic d 100.0 4.2E-39 9.1E-44 330.8 27.6 263 403-679 2-265 (265)
143 PHA03207 serine/threonine kina 100.0 9.6E-40 2.1E-44 357.9 24.2 261 399-681 88-381 (392)
144 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.8E-39 3.9E-44 331.5 24.4 261 403-678 1-267 (267)
145 KOG0589 Serine/threonine prote 100.0 1.4E-40 3.1E-45 361.4 17.0 257 403-679 4-262 (426)
146 cd05096 PTKc_DDR1 Catalytic do 100.0 2.6E-39 5.6E-44 340.1 26.0 258 401-673 3-299 (304)
147 cd06656 STKc_PAK3 Catalytic do 100.0 1.6E-39 3.5E-44 341.6 23.9 260 401-682 17-276 (297)
148 cd06611 STKc_SLK_like Catalyti 100.0 1.2E-39 2.6E-44 337.5 22.4 262 402-681 4-268 (280)
149 PHA02988 hypothetical protein; 100.0 2.6E-39 5.6E-44 338.7 24.9 246 409-674 26-274 (283)
150 cd06613 STKc_MAP4K3_like Catal 100.0 4E-39 8.6E-44 328.6 25.6 260 402-677 2-262 (262)
151 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.5E-39 5.4E-44 335.2 24.5 261 403-678 1-286 (286)
152 cd06638 STKc_myosinIIIA Cataly 100.0 3E-39 6.4E-44 335.1 25.0 266 395-678 10-286 (286)
153 cd06632 STKc_MEKK1_plant Catal 100.0 4.5E-39 9.7E-44 326.9 25.6 258 404-678 1-258 (258)
154 KOG4279 Serine/threonine prote 100.0 1.2E-40 2.6E-45 366.8 14.6 254 410-682 582-839 (1226)
155 cd06612 STKc_MST1_2 Catalytic 100.0 2.5E-39 5.4E-44 329.0 23.2 254 402-678 2-256 (256)
156 cd06608 STKc_myosinIII_like Ca 100.0 2.9E-39 6.3E-44 330.9 23.9 261 400-678 3-275 (275)
157 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2E-39 4.3E-44 337.3 22.9 262 402-682 4-273 (284)
158 cd05578 STKc_Yank1 Catalytic d 100.0 2.9E-39 6.3E-44 330.2 23.2 254 404-678 1-258 (258)
159 cd06605 PKc_MAPKK Catalytic do 100.0 1.8E-39 3.8E-44 332.2 21.5 257 404-680 2-262 (265)
160 cd06639 STKc_myosinIIIB Cataly 100.0 8.5E-39 1.8E-43 333.3 27.0 262 400-679 19-291 (291)
161 cd05064 PTKc_EphR_A10 Catalyti 100.0 6E-39 1.3E-43 331.0 25.3 253 401-674 3-260 (266)
162 cd08217 STKc_Nek2 Catalytic do 100.0 1E-38 2.2E-43 324.5 26.5 257 404-678 1-265 (265)
163 cd08220 STKc_Nek8 Catalytic do 100.0 1.1E-38 2.5E-43 324.1 26.6 253 404-678 1-256 (256)
164 KOG1989 ARK protein kinase fam 100.0 6E-40 1.3E-44 374.4 18.8 267 397-678 31-310 (738)
165 cd07832 STKc_CCRK Catalytic do 100.0 8.1E-39 1.8E-43 330.9 25.6 261 404-679 1-286 (286)
166 cd07860 STKc_CDK2_3 Catalytic 100.0 9.4E-39 2E-43 331.0 26.1 259 404-678 1-284 (284)
167 cd07833 STKc_CDKL Catalytic do 100.0 8E-39 1.7E-43 331.3 25.3 262 403-678 1-288 (288)
168 cd05609 STKc_MAST Catalytic do 100.0 1.9E-38 4.1E-43 334.0 28.6 265 403-681 1-279 (305)
169 KOG0690 Serine/threonine prote 100.0 1.8E-40 3.8E-45 341.4 12.5 258 402-680 167-429 (516)
170 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.8E-39 1.7E-43 331.0 24.9 262 403-682 1-268 (283)
171 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.4E-39 1.6E-43 331.9 24.6 259 401-678 14-282 (282)
172 PHA03211 serine/threonine kina 100.0 6.1E-39 1.3E-43 359.5 25.7 257 401-680 167-460 (461)
173 KOG0667 Dual-specificity tyros 100.0 1.9E-39 4.1E-44 360.7 21.0 259 399-680 182-507 (586)
174 KOG0574 STE20-like serine/thre 100.0 9.8E-42 2.1E-46 347.6 2.5 256 404-682 34-290 (502)
175 cd08218 STKc_Nek1 Catalytic do 100.0 1.4E-38 3E-43 324.4 25.7 254 404-678 1-256 (256)
176 cd07841 STKc_CDK7 Catalytic do 100.0 9.1E-39 2E-43 333.8 24.9 265 404-681 1-288 (298)
177 cd08221 STKc_Nek9 Catalytic do 100.0 2.3E-38 4.9E-43 322.8 26.9 254 404-678 1-256 (256)
178 cd07867 STKc_CDC2L6 Catalytic 100.0 7E-39 1.5E-43 337.6 23.9 255 408-678 6-317 (317)
179 KOG0596 Dual specificity; seri 100.0 6.5E-40 1.4E-44 356.2 16.3 266 398-680 356-632 (677)
180 cd07837 STKc_CdkB_plant Cataly 100.0 1.8E-38 3.9E-43 330.7 26.4 262 403-679 1-295 (295)
181 cd06623 PKc_MAPKK_plant_like C 100.0 1.3E-38 2.8E-43 324.6 24.8 258 404-682 2-263 (264)
182 cd05572 STKc_cGK_PKG Catalytic 100.0 9.1E-39 2E-43 327.3 23.7 250 411-680 1-257 (262)
183 cd06624 STKc_ASK Catalytic dom 100.0 3E-38 6.4E-43 325.0 27.1 257 403-678 8-268 (268)
184 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.5E-38 5.3E-43 330.0 26.8 260 403-682 1-273 (287)
185 cd05104 PTKc_Kit Catalytic dom 100.0 7.3E-39 1.6E-43 349.1 23.3 260 397-675 29-370 (375)
186 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-38 2.4E-43 334.7 23.5 260 401-682 17-276 (293)
187 cd06607 STKc_TAO Catalytic dom 100.0 1.9E-38 4.1E-43 334.3 25.4 261 400-681 12-273 (307)
188 KOG0608 Warts/lats-like serine 100.0 4.3E-39 9.3E-44 352.3 20.8 270 399-681 625-934 (1034)
189 cd07831 STKc_MOK Catalytic dom 100.0 1.5E-38 3.3E-43 328.2 23.8 255 405-678 1-282 (282)
190 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-38 2.5E-43 330.4 23.0 252 411-680 1-259 (277)
191 cd07844 STKc_PCTAIRE_like Cata 100.0 3.2E-38 6.8E-43 328.6 26.1 259 403-678 5-291 (291)
192 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.7E-38 1E-42 327.8 27.4 260 402-678 4-291 (291)
193 cd05106 PTKc_CSF-1R Catalytic 100.0 7.9E-39 1.7E-43 349.0 22.4 259 397-674 32-367 (374)
194 cd07849 STKc_ERK1_2_like Catal 100.0 1.6E-38 3.5E-43 339.7 24.3 267 401-681 3-298 (336)
195 cd05054 PTKc_VEGFR Catalytic d 100.0 7.2E-39 1.6E-43 344.2 21.5 260 398-675 2-329 (337)
196 cd05048 PTKc_Ror Catalytic Dom 100.0 1.9E-38 4.1E-43 328.6 23.6 253 403-675 5-279 (283)
197 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-38 3.1E-43 339.8 23.3 270 402-682 4-301 (334)
198 cd08225 STKc_Nek5 Catalytic do 100.0 3.5E-38 7.5E-43 320.7 24.9 254 404-678 1-257 (257)
199 cd06653 STKc_MEKK3_like_1 Cata 100.0 7E-38 1.5E-42 322.0 27.3 262 403-678 2-264 (264)
200 cd05581 STKc_PDK1 Catalytic do 100.0 3.4E-38 7.4E-43 324.3 25.0 260 403-678 1-280 (280)
201 cd06606 STKc_MAPKKK Catalytic 100.0 6.4E-38 1.4E-42 316.2 26.4 258 404-678 1-260 (260)
202 cd05062 PTKc_IGF-1R Catalytic 100.0 3.3E-38 7.1E-43 326.6 24.8 258 398-675 1-274 (277)
203 KOG4717 Serine/threonine prote 100.0 3.6E-39 7.8E-44 346.5 18.0 260 401-682 16-277 (864)
204 cd05633 STKc_GRK3 Catalytic do 100.0 3.2E-38 7E-43 328.8 24.5 253 410-681 1-261 (279)
205 cd05611 STKc_Rim15_like Cataly 100.0 4.4E-38 9.6E-43 321.9 25.0 251 409-682 2-258 (260)
206 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.7E-38 5.9E-43 338.4 24.3 266 401-681 3-297 (337)
207 cd06917 STKc_NAK1_like Catalyt 100.0 2.9E-38 6.2E-43 326.2 23.5 257 404-681 2-261 (277)
208 cd05122 PKc_STE Catalytic doma 100.0 8.4E-38 1.8E-42 314.0 26.2 251 405-677 2-253 (253)
209 cd06640 STKc_MST4 Catalytic do 100.0 2.8E-38 6.1E-43 327.5 23.3 257 403-682 4-260 (277)
210 cd06658 STKc_PAK5 Catalytic do 100.0 1.7E-38 3.8E-43 333.3 22.0 258 402-681 21-278 (292)
211 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.6E-39 2.1E-43 330.6 19.8 255 403-680 4-258 (277)
212 cd07865 STKc_CDK9 Catalytic do 100.0 7.4E-38 1.6E-42 327.5 26.4 266 402-678 11-310 (310)
213 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-38 3.9E-43 330.0 21.7 260 404-680 5-272 (288)
214 KOG0577 Serine/threonine prote 100.0 7.8E-40 1.7E-44 356.1 11.7 257 404-681 27-284 (948)
215 cd07836 STKc_Pho85 Catalytic d 100.0 6.8E-38 1.5E-42 324.2 25.7 258 404-678 1-284 (284)
216 cd07850 STKc_JNK Catalytic dom 100.0 3.5E-38 7.6E-43 339.6 24.4 260 401-679 14-315 (353)
217 PHA03390 pk1 serine/threonine- 100.0 3.8E-38 8.3E-43 326.2 23.8 248 404-680 15-267 (267)
218 PLN00009 cyclin-dependent kina 100.0 7.9E-38 1.7E-42 326.5 26.3 262 403-680 2-289 (294)
219 cd07835 STKc_CDK1_like Catalyt 100.0 6.2E-38 1.4E-42 324.7 25.2 258 405-678 1-283 (283)
220 cd05052 PTKc_Abl Catalytic dom 100.0 7.5E-38 1.6E-42 321.5 25.6 253 399-674 2-257 (263)
221 KOG0584 Serine/threonine prote 100.0 2.5E-39 5.4E-44 357.3 15.3 254 407-681 44-302 (632)
222 cd05579 STKc_MAST_like Catalyt 100.0 6.7E-38 1.4E-42 318.6 24.8 257 411-681 1-263 (265)
223 cd05032 PTKc_InsR_like Catalyt 100.0 6.7E-38 1.5E-42 323.0 24.7 257 398-674 1-273 (277)
224 cd07842 STKc_CDK8_like Catalyt 100.0 4.8E-38 1.1E-42 330.2 24.1 263 404-678 1-316 (316)
225 cd06648 STKc_PAK_II Catalytic 100.0 7.2E-38 1.6E-42 326.8 25.2 257 404-682 20-276 (285)
226 cd06641 STKc_MST3 Catalytic do 100.0 7.5E-38 1.6E-42 324.3 25.0 255 404-681 5-259 (277)
227 cd05061 PTKc_InsR Catalytic do 100.0 1E-37 2.2E-42 325.6 26.0 264 398-681 1-286 (288)
228 cd07845 STKc_CDK10 Catalytic d 100.0 6E-38 1.3E-42 330.5 24.6 264 402-680 6-295 (309)
229 cd05108 PTKc_EGFR Catalytic do 100.0 4.8E-38 1E-42 333.0 23.9 253 402-675 6-264 (316)
230 KOG0986 G protein-coupled rece 100.0 3.2E-39 7E-44 344.0 14.8 264 399-680 181-451 (591)
231 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-37 2.4E-42 319.8 25.5 254 403-675 2-261 (267)
232 KOG0604 MAP kinase-activated p 100.0 1.1E-39 2.3E-44 333.3 10.5 257 402-681 60-328 (400)
233 cd05072 PTKc_Lyn Catalytic dom 100.0 1E-37 2.3E-42 319.3 25.3 253 398-674 1-256 (261)
234 cd06627 STKc_Cdc7_like Catalyt 100.0 1.9E-37 4.1E-42 313.8 26.8 254 404-678 1-254 (254)
235 cd05606 STKc_beta_ARK Catalyti 100.0 1.1E-37 2.4E-42 324.3 25.3 256 410-681 1-261 (278)
236 cd06614 STKc_PAK Catalytic dom 100.0 6.6E-38 1.4E-42 325.8 23.6 260 401-682 17-277 (286)
237 cd05613 STKc_MSK1_N N-terminal 100.0 1.1E-37 2.4E-42 324.7 25.4 266 404-682 1-275 (290)
238 KOG0983 Mitogen-activated prot 100.0 5.3E-39 1.2E-43 324.8 14.8 260 403-679 92-353 (391)
239 cd07834 STKc_MAPK Catalytic do 100.0 5.4E-38 1.2E-42 333.5 23.3 266 404-681 1-295 (330)
240 cd06659 STKc_PAK6 Catalytic do 100.0 5.1E-38 1.1E-42 330.6 22.8 252 408-681 26-277 (297)
241 cd05049 PTKc_Trk Catalytic dom 100.0 6.1E-38 1.3E-42 323.8 23.0 253 402-674 4-276 (280)
242 cd08215 STKc_Nek Catalytic dom 100.0 1.6E-37 3.6E-42 313.9 25.6 254 404-678 1-258 (258)
243 cd08226 PK_STRAD_beta Pseudoki 100.0 2.3E-38 4.9E-43 337.5 20.1 265 409-682 4-315 (328)
244 cd08219 STKc_Nek3 Catalytic do 100.0 1.3E-37 2.8E-42 317.5 24.7 251 404-676 1-253 (255)
245 cd07852 STKc_MAPK15 Catalytic 100.0 5.5E-38 1.2E-42 335.4 22.9 269 401-680 5-300 (337)
246 KOG0193 Serine/threonine prote 100.0 3.3E-39 7.2E-44 354.3 13.6 259 396-674 385-648 (678)
247 cd07843 STKc_CDC2L1 Catalytic 100.0 8.9E-38 1.9E-42 326.0 23.7 260 403-678 5-293 (293)
248 cd05116 PTKc_Syk Catalytic dom 100.0 1.5E-37 3.3E-42 318.2 24.9 246 410-674 2-250 (257)
249 cd06618 PKc_MKK7 Catalytic dom 100.0 1.7E-37 3.6E-42 325.1 25.7 268 398-682 10-280 (296)
250 KOG2345 Serine/threonine prote 100.0 6E-39 1.3E-43 321.1 14.0 268 398-675 16-296 (302)
251 cd05084 PTKc_Fes Catalytic dom 100.0 1.2E-37 2.7E-42 317.1 24.0 245 410-674 2-248 (252)
252 cd05053 PTKc_FGFR Catalytic do 100.0 9.2E-38 2E-42 325.5 23.5 259 397-675 6-287 (293)
253 cd00192 PTKc Catalytic domain 100.0 1.5E-37 3.2E-42 314.9 24.4 247 409-675 1-260 (262)
254 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-37 3.3E-42 322.0 24.9 255 401-675 4-274 (277)
255 cd07840 STKc_CDK9_like Catalyt 100.0 2E-37 4.3E-42 319.8 25.5 260 405-678 1-287 (287)
256 cd05051 PTKc_DDR Catalytic dom 100.0 1.3E-37 2.8E-42 324.4 24.2 258 402-674 4-292 (296)
257 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.7E-38 2.1E-42 344.0 24.5 259 397-674 31-392 (400)
258 cd07864 STKc_CDK12 Catalytic d 100.0 1.5E-37 3.4E-42 324.7 24.6 264 401-678 5-302 (302)
259 cd05068 PTKc_Frk_like Catalyti 100.0 3.1E-37 6.7E-42 316.2 26.0 253 398-674 1-256 (261)
260 cd05033 PTKc_EphR Catalytic do 100.0 2.4E-37 5.3E-42 317.9 24.9 254 402-675 3-261 (266)
261 cd07866 STKc_BUR1 Catalytic do 100.0 2.8E-37 6E-42 323.3 25.6 267 402-678 7-311 (311)
262 PTZ00024 cyclin-dependent prot 100.0 2.3E-37 5E-42 330.0 25.3 276 401-682 6-320 (335)
263 KOG4721 Serine/threonine prote 100.0 2.7E-39 6E-44 350.8 10.5 247 398-676 119-365 (904)
264 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-37 2.6E-42 334.8 23.1 260 398-675 2-335 (343)
265 cd05075 PTKc_Axl Catalytic dom 100.0 2.5E-37 5.5E-42 317.9 24.6 253 405-675 1-267 (272)
266 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.2E-37 4.8E-42 332.7 25.1 262 401-681 13-304 (343)
267 cd05093 PTKc_TrkB Catalytic do 100.0 2.9E-37 6.3E-42 322.1 25.2 253 401-674 3-274 (288)
268 cd05090 PTKc_Ror1 Catalytic do 100.0 3E-37 6.5E-42 320.4 24.7 253 403-675 5-279 (283)
269 cd08229 STKc_Nek7 Catalytic do 100.0 2.3E-37 4.9E-42 317.4 23.2 253 403-674 2-260 (267)
270 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.5E-37 9.8E-42 328.6 26.4 264 400-682 7-295 (328)
271 cd05060 PTKc_Syk_like Catalyti 100.0 4.7E-37 1E-41 314.2 25.4 246 409-674 1-250 (257)
272 cd06633 STKc_TAO3 Catalytic do 100.0 5.9E-37 1.3E-41 324.8 26.9 257 404-681 22-279 (313)
273 cd08530 STKc_CNK2-like Catalyt 100.0 5.4E-37 1.2E-41 311.3 25.5 251 404-678 1-256 (256)
274 cd05055 PTKc_PDGFR Catalytic d 100.0 4.1E-37 8.8E-42 324.4 25.4 259 397-674 29-296 (302)
275 cd05071 PTKc_Src Catalytic dom 100.0 4.5E-37 9.7E-42 316.4 25.0 251 399-674 2-255 (262)
276 cd05035 PTKc_Axl_like Catalyti 100.0 3.7E-37 8E-42 316.0 24.3 253 405-675 1-268 (273)
277 cd06635 STKc_TAO1 Catalytic do 100.0 5.5E-37 1.2E-41 325.3 26.4 258 403-681 25-283 (317)
278 PF07714 Pkinase_Tyr: Protein 100.0 2.9E-37 6.3E-42 318.2 23.5 249 406-674 2-257 (259)
279 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.4E-37 1.2E-41 313.5 25.3 248 403-674 4-253 (256)
280 cd05065 PTKc_EphR_B Catalytic 100.0 4.8E-37 1E-41 316.2 25.0 255 403-674 4-263 (269)
281 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.4E-37 9.6E-42 323.9 25.1 261 395-675 10-295 (307)
282 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.7E-37 3.8E-42 317.2 21.3 250 401-674 4-256 (261)
283 cd05089 PTKc_Tie1 Catalytic do 100.0 4.4E-37 9.5E-42 322.5 24.9 250 403-675 2-271 (297)
284 cd05111 PTK_HER3 Pseudokinase 100.0 5.1E-37 1.1E-41 319.1 25.1 251 403-674 7-263 (279)
285 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.9E-37 6.4E-42 331.4 23.9 264 402-680 4-305 (342)
286 cd05043 PTK_Ryk Pseudokinase d 100.0 5.7E-37 1.2E-41 317.5 25.1 256 400-674 3-271 (280)
287 cd05109 PTKc_HER2 Catalytic do 100.0 6E-37 1.3E-41 317.5 25.3 252 402-674 6-263 (279)
288 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.1E-37 8.9E-42 315.1 23.8 252 398-674 1-255 (260)
289 cd05066 PTKc_EphR_A Catalytic 100.0 5.5E-37 1.2E-41 315.8 24.8 254 402-674 3-261 (267)
290 cd05097 PTKc_DDR_like Catalyti 100.0 3.3E-37 7.2E-42 322.7 23.5 258 402-674 4-291 (295)
291 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.5E-37 1.2E-41 314.2 24.6 252 398-674 1-255 (260)
292 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 9.3E-37 2E-41 311.9 26.1 255 403-674 2-260 (267)
293 cd08216 PK_STRAD Pseudokinase 100.0 2.1E-37 4.6E-42 326.3 21.9 258 415-681 12-301 (314)
294 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.4E-37 7.4E-42 320.0 23.1 259 402-674 2-276 (283)
295 cd07879 STKc_p38delta_MAPK13 C 100.0 4.5E-37 9.8E-42 329.9 24.6 262 401-682 13-304 (342)
296 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.9E-37 1.7E-41 317.0 25.5 260 402-675 3-279 (284)
297 cd05082 PTKc_Csk Catalytic dom 100.0 6.8E-37 1.5E-41 312.8 24.7 246 400-674 3-251 (256)
298 cd05123 STKc_AGC Catalytic dom 100.0 7.5E-37 1.6E-41 309.6 24.6 247 411-678 1-250 (250)
299 cd05118 STKc_CMGC Catalytic do 100.0 4.7E-37 1E-41 316.8 23.5 258 405-678 1-283 (283)
300 cd05115 PTKc_Zap-70 Catalytic 100.0 9.3E-37 2E-41 313.5 25.5 244 411-674 3-250 (257)
301 KOG4645 MAPKKK (MAP kinase kin 100.0 2.1E-39 4.5E-44 378.0 6.5 267 401-680 1233-1499(1509)
302 cd05069 PTKc_Yes Catalytic dom 100.0 1.2E-36 2.7E-41 312.0 26.2 251 399-674 2-255 (260)
303 cd07851 STKc_p38 Catalytic dom 100.0 4E-37 8.6E-42 330.5 23.6 262 401-681 13-304 (343)
304 cd05059 PTKc_Tec_like Catalyti 100.0 5.9E-37 1.3E-41 313.6 23.6 249 403-675 4-254 (256)
305 cd05101 PTKc_FGFR2 Catalytic d 100.0 8.8E-37 1.9E-41 320.9 25.4 259 397-675 9-292 (304)
306 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-36 2.7E-41 312.5 25.9 255 401-674 3-262 (268)
307 PRK13184 pknD serine/threonine 100.0 6E-37 1.3E-41 361.0 26.6 258 403-673 2-283 (932)
308 cd08222 STKc_Nek11 Catalytic d 100.0 6E-37 1.3E-41 313.5 23.3 255 404-678 1-260 (260)
309 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-36 2.7E-41 310.5 25.5 246 400-674 3-251 (256)
310 cd05034 PTKc_Src_like Catalyti 100.0 1.4E-36 2.9E-41 310.6 25.8 253 398-674 1-256 (261)
311 cd05583 STKc_MSK_N N-terminal 100.0 1E-36 2.3E-41 317.1 25.4 265 404-681 1-272 (288)
312 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.4E-36 3.1E-41 311.6 25.6 249 403-675 4-254 (256)
313 cd05091 PTKc_Ror2 Catalytic do 100.0 3.9E-37 8.4E-42 319.2 21.5 253 403-675 5-279 (283)
314 cd07830 STKc_MAK_like Catalyti 100.0 8.3E-37 1.8E-41 315.9 23.9 256 405-678 1-283 (283)
315 cd05088 PTKc_Tie2 Catalytic do 100.0 4.6E-37 1E-41 323.9 22.3 250 403-675 7-276 (303)
316 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.2E-36 2.7E-41 321.9 25.6 258 397-674 6-288 (314)
317 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.5E-37 2.1E-41 328.1 25.1 263 399-680 13-305 (345)
318 cd05092 PTKc_TrkA Catalytic do 100.0 8.5E-37 1.8E-41 317.3 23.9 253 401-674 3-276 (280)
319 cd07838 STKc_CDK4_6_like Catal 100.0 1.3E-36 2.9E-41 314.1 25.1 256 405-678 1-287 (287)
320 cd05095 PTKc_DDR2 Catalytic do 100.0 1E-36 2.2E-41 319.1 24.6 259 401-674 3-292 (296)
321 cd05056 PTKc_FAK Catalytic dom 100.0 1.7E-36 3.7E-41 312.3 25.8 254 400-675 3-261 (270)
322 cd07857 STKc_MPK1 Catalytic do 100.0 1.4E-36 3.1E-41 324.1 26.0 266 404-680 1-297 (332)
323 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-36 2.6E-41 310.3 24.3 247 409-674 1-253 (257)
324 cd05045 PTKc_RET Catalytic dom 100.0 1.2E-36 2.5E-41 317.5 24.6 251 404-674 1-281 (290)
325 cd06634 STKc_TAO2 Catalytic do 100.0 7.6E-37 1.7E-41 322.9 23.4 259 402-681 14-273 (308)
326 cd06657 STKc_PAK4 Catalytic do 100.0 7.4E-37 1.6E-41 321.2 23.0 253 408-682 25-277 (292)
327 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-36 2.6E-41 325.1 24.8 260 396-675 5-289 (334)
328 PHA03210 serine/threonine kina 100.0 3.3E-37 7.2E-42 349.0 21.7 269 401-680 146-459 (501)
329 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-36 3.6E-41 316.8 25.2 251 403-674 5-277 (291)
330 cd07829 STKc_CDK_like Catalyti 100.0 1E-36 2.2E-41 314.1 22.6 258 405-678 1-282 (282)
331 KOG0607 MAP kinase-interacting 100.0 6.3E-38 1.4E-42 322.3 13.3 267 404-680 78-366 (463)
332 cd05046 PTK_CCK4 Pseudokinase 100.0 1.6E-36 3.4E-41 312.9 23.7 254 402-675 4-272 (275)
333 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-36 2.5E-41 316.6 22.7 259 404-675 5-279 (284)
334 cd05058 PTKc_Met_Ron Catalytic 100.0 2.2E-36 4.8E-41 309.2 24.3 250 409-675 1-255 (262)
335 KOG0586 Serine/threonine prote 100.0 1.8E-37 4E-42 342.1 17.0 260 399-680 52-311 (596)
336 KOG1026 Nerve growth factor re 100.0 1.6E-37 3.5E-42 353.3 17.0 256 398-673 481-756 (774)
337 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.5E-36 3.2E-41 334.8 24.0 260 397-675 31-395 (401)
338 cd05042 PTKc_Aatyk Catalytic d 100.0 2.4E-36 5.1E-41 311.0 23.5 249 410-674 2-265 (269)
339 PHA02882 putative serine/threo 100.0 5.6E-36 1.2E-40 314.6 26.6 268 400-674 9-291 (294)
340 cd05050 PTKc_Musk Catalytic do 100.0 3.1E-36 6.6E-41 313.6 24.3 254 401-674 3-284 (288)
341 cd05047 PTKc_Tie Catalytic dom 100.0 2.8E-36 6E-41 311.5 23.8 242 410-674 2-263 (270)
342 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.1E-36 6.6E-41 310.6 23.9 249 410-674 2-265 (269)
343 cd05057 PTKc_EGFR_like Catalyt 100.0 6.3E-36 1.4E-40 309.9 26.2 252 402-674 6-263 (279)
344 cd05085 PTKc_Fer Catalytic dom 100.0 5.5E-36 1.2E-40 304.2 25.1 244 410-675 2-247 (250)
345 smart00219 TyrKc Tyrosine kina 100.0 5E-36 1.1E-40 304.1 24.7 248 406-674 2-256 (258)
346 cd05073 PTKc_Hck Catalytic dom 100.0 5.6E-36 1.2E-40 307.1 25.0 252 398-674 1-255 (260)
347 cd05083 PTKc_Chk Catalytic dom 100.0 6.2E-36 1.3E-40 305.4 23.6 241 403-674 6-249 (254)
348 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5E-36 1.1E-40 309.3 22.8 259 403-674 4-278 (284)
349 cd05110 PTKc_HER4 Catalytic do 100.0 6.2E-36 1.3E-40 315.0 23.8 253 402-675 6-264 (303)
350 cd05610 STKc_MASTL Catalytic d 100.0 8.1E-36 1.7E-40 348.6 27.1 150 403-559 4-153 (669)
351 KOG0194 Protein tyrosine kinas 100.0 1.2E-36 2.5E-41 336.2 18.5 259 396-674 150-415 (474)
352 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-35 2.6E-40 305.3 24.7 256 405-675 2-266 (269)
353 cd05576 STKc_RPK118_like Catal 100.0 4.8E-36 1E-40 304.9 21.4 229 414-678 4-237 (237)
354 KOG0696 Serine/threonine prote 100.0 5.6E-37 1.2E-41 323.0 14.9 260 401-681 347-612 (683)
355 cd05112 PTKc_Itk Catalytic dom 100.0 1.9E-35 4.1E-40 301.3 25.6 249 403-675 4-254 (256)
356 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 9E-36 1.9E-40 307.4 23.5 239 409-675 1-260 (262)
357 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.4E-36 1.8E-40 309.9 23.4 238 410-675 2-272 (274)
358 cd05044 PTKc_c-ros Catalytic d 100.0 7.1E-36 1.5E-40 306.7 21.9 245 410-674 2-265 (269)
359 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4E-36 8.8E-41 308.2 19.3 238 410-675 2-256 (258)
360 KOG1095 Protein tyrosine kinas 100.0 3.2E-36 6.9E-41 353.2 21.0 254 400-674 689-956 (1025)
361 cd05041 PTKc_Fes_like Catalyti 100.0 2.3E-35 5E-40 299.8 24.7 245 409-674 1-247 (251)
362 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.3E-35 2.9E-40 302.1 22.5 238 409-675 1-257 (259)
363 KOG1035 eIF-2alpha kinase GCN2 100.0 2.1E-36 4.5E-41 351.7 17.2 260 403-679 479-875 (1351)
364 KOG4236 Serine/threonine prote 100.0 5.8E-37 1.3E-41 330.2 11.6 249 409-680 570-824 (888)
365 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.2E-35 6.8E-40 302.5 23.7 253 405-675 1-268 (273)
366 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.9E-35 1.1E-39 302.2 24.8 249 410-674 2-264 (268)
367 KOG0666 Cyclin C-dependent kin 100.0 5.6E-36 1.2E-40 307.2 14.6 264 404-682 25-344 (438)
368 KOG0662 Cyclin-dependent kinas 100.0 1.2E-35 2.5E-40 285.3 15.6 261 404-680 3-288 (292)
369 KOG0587 Traf2- and Nck-interac 100.0 3.7E-35 8E-40 332.8 19.6 268 395-680 11-287 (953)
370 KOG4257 Focal adhesion tyrosin 100.0 3.1E-35 6.8E-40 321.9 15.7 256 396-673 382-643 (974)
371 KOG0603 Ribosomal protein S6 k 100.0 4.6E-35 1E-39 324.6 17.0 245 401-678 320-566 (612)
372 smart00220 S_TKc Serine/Threon 100.0 8.7E-34 1.9E-38 282.3 24.1 243 415-678 1-244 (244)
373 KOG4250 TANK binding protein k 100.0 2.7E-35 5.8E-40 328.8 14.4 248 403-667 13-296 (732)
374 KOG0614 cGMP-dependent protein 100.0 6.8E-36 1.5E-40 321.5 9.2 256 405-680 422-682 (732)
375 KOG1006 Mitogen-activated prot 100.0 2.7E-36 5.8E-41 304.3 5.7 261 402-680 63-332 (361)
376 KOG0196 Tyrosine kinase, EPH ( 100.0 2E-35 4.3E-40 330.7 13.1 255 401-674 627-886 (996)
377 KOG0671 LAMMER dual specificit 100.0 3.2E-35 6.9E-40 309.2 12.3 265 395-682 81-413 (415)
378 KOG1094 Discoidin domain recep 100.0 6.9E-35 1.5E-39 318.0 15.1 258 401-674 536-799 (807)
379 PLN03225 Serine/threonine-prot 100.0 3.1E-34 6.6E-39 328.9 20.8 264 401-681 130-456 (566)
380 KOG0669 Cyclin T-dependent kin 100.0 8.8E-36 1.9E-40 298.5 5.5 274 396-680 10-320 (376)
381 KOG0199 ACK and related non-re 100.0 1.5E-34 3.4E-39 319.8 13.9 260 401-680 108-373 (1039)
382 PLN03224 probable serine/threo 100.0 4.9E-33 1.1E-37 313.5 25.2 275 400-680 142-505 (507)
383 KOG0695 Serine/threonine prote 100.0 1.8E-33 3.9E-38 290.4 16.4 267 396-681 243-522 (593)
384 KOG4278 Protein tyrosine kinas 100.0 3.5E-33 7.5E-38 305.1 19.1 256 395-673 259-517 (1157)
385 KOG0670 U4/U6-associated splic 100.0 1.5E-33 3.3E-38 304.1 10.4 260 399-680 428-751 (752)
386 PLN00113 leucine-rich repeat r 100.0 1.7E-32 3.6E-37 332.5 20.4 245 403-675 690-947 (968)
387 KOG1290 Serine/threonine prote 100.0 2.1E-31 4.5E-36 286.7 22.0 133 401-543 76-221 (590)
388 KOG0668 Casein kinase II, alph 100.0 2.5E-32 5.3E-37 270.8 12.8 258 401-681 36-328 (338)
389 KOG1027 Serine/threonine prote 100.0 8.4E-33 1.8E-37 312.5 8.7 243 408-678 514-770 (903)
390 KOG2052 Activin A type IB rece 100.0 6.4E-31 1.4E-35 280.8 18.6 261 399-673 207-497 (513)
391 KOG0200 Fibroblast/platelet-de 100.0 2E-30 4.4E-35 299.9 22.5 258 397-674 290-574 (609)
392 KOG0665 Jun-N-terminal kinase 100.0 2.8E-31 6E-36 274.2 12.5 260 400-679 14-314 (369)
393 KOG0664 Nemo-like MAPK-related 100.0 3.4E-32 7.5E-37 275.1 5.2 262 405-680 55-348 (449)
394 KOG3653 Transforming growth fa 100.0 1E-30 2.2E-35 281.0 15.0 250 404-670 211-494 (534)
395 KOG1025 Epidermal growth facto 100.0 1E-30 2.3E-35 293.6 15.6 249 404-673 697-951 (1177)
396 KOG0576 Mitogen-activated prot 100.0 9.6E-32 2.1E-36 297.4 7.0 264 401-680 13-276 (829)
397 KOG0984 Mitogen-activated prot 100.0 1.1E-30 2.4E-35 255.9 12.0 216 398-628 41-262 (282)
398 cd00180 PKc Catalytic domain o 100.0 5.7E-29 1.2E-33 240.4 22.5 213 411-676 1-215 (215)
399 KOG1167 Serine/threonine prote 100.0 1.6E-30 3.4E-35 276.9 11.2 267 398-681 31-387 (418)
400 smart00221 STYKc Protein kinas 100.0 1E-27 2.2E-32 237.4 22.0 201 405-620 1-202 (225)
401 KOG1152 Signal transduction se 100.0 6E-29 1.3E-33 271.6 11.7 202 404-620 562-771 (772)
402 PLN00181 protein SPA1-RELATED; 99.9 3.1E-28 6.8E-33 290.0 11.9 205 463-680 28-270 (793)
403 KOG1345 Serine/threonine kinas 99.9 8.1E-28 1.7E-32 243.7 8.7 258 401-677 22-289 (378)
404 smart00750 KIND kinase non-cat 99.9 2.6E-26 5.6E-31 222.2 13.2 163 493-679 1-169 (176)
405 KOG1024 Receptor-like protein 99.9 3.6E-26 7.9E-31 240.8 14.5 257 399-674 280-550 (563)
406 COG0515 SPS1 Serine/threonine 99.9 2.6E-24 5.7E-29 217.6 25.8 263 405-680 2-280 (384)
407 KOG0590 Checkpoint kinase and 99.9 4.5E-26 9.8E-31 262.1 7.3 268 406-682 321-592 (601)
408 KOG1164 Casein kinase (serine/ 99.9 2.6E-23 5.5E-28 222.9 23.8 256 404-674 19-292 (322)
409 KOG1163 Casein kinase (serine/ 99.9 3.2E-23 7E-28 207.5 17.4 256 400-672 12-277 (341)
410 KOG1165 Casein kinase (serine/ 99.9 2.8E-23 6E-28 215.8 17.4 260 397-672 22-292 (449)
411 PRK09188 serine/threonine prot 99.9 1.1E-23 2.3E-28 229.1 15.0 178 398-591 13-196 (365)
412 KOG0603 Ribosomal protein S6 k 99.9 1.4E-23 3E-28 233.6 2.5 240 410-681 1-249 (612)
413 PF14531 Kinase-like: Kinase-l 99.9 1.3E-21 2.7E-26 205.6 15.1 237 405-666 14-288 (288)
414 cd05147 RIO1_euk RIO kinase fa 99.8 6E-21 1.3E-25 190.1 12.8 147 408-561 2-168 (190)
415 KOG0606 Microtubule-associated 99.8 3E-21 6.5E-26 223.9 11.0 227 401-681 81-321 (1205)
416 cd05145 RIO1_like RIO kinase f 99.8 2.6E-20 5.6E-25 184.9 14.2 148 408-562 2-169 (190)
417 PRK10359 lipopolysaccharide co 99.8 8.8E-21 1.9E-25 193.8 11.0 181 399-612 27-216 (232)
418 KOG0195 Integrin-linked kinase 99.8 8.4E-21 1.8E-25 192.7 8.3 246 404-673 191-440 (448)
419 KOG4158 BRPK/PTEN-induced prot 99.8 7.1E-20 1.5E-24 194.0 12.9 197 465-672 274-507 (598)
420 KOG1240 Protein kinase contain 99.8 3.3E-20 7.1E-25 215.3 9.9 257 404-675 24-291 (1431)
421 PRK12274 serine/threonine prot 99.8 5.4E-19 1.2E-23 177.9 13.7 196 406-621 5-210 (218)
422 PRK10345 hypothetical protein; 99.8 2.9E-18 6.4E-23 173.5 13.7 135 408-557 7-156 (210)
423 KOG1166 Mitotic checkpoint ser 99.8 2.9E-18 6.2E-23 202.6 14.5 201 396-616 691-901 (974)
424 smart00090 RIO RIO-like kinase 99.8 5E-18 1.1E-22 174.9 12.8 149 405-560 30-198 (237)
425 PRK14879 serine/threonine prot 99.7 3.2E-17 6.9E-22 163.8 13.9 141 409-559 2-143 (211)
426 TIGR03724 arch_bud32 Kae1-asso 99.7 6E-17 1.3E-21 160.5 12.8 138 410-560 1-139 (199)
427 KOG1023 Natriuretic peptide re 99.7 2.4E-17 5.2E-22 183.5 10.3 205 461-673 1-218 (484)
428 cd05144 RIO2_C RIO kinase fami 99.7 1E-16 2.2E-21 159.7 12.0 144 404-561 16-176 (198)
429 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.2E-17 2.5E-22 183.6 5.2 211 451-679 288-516 (516)
430 KOG0590 Checkpoint kinase and 99.7 1.8E-18 4E-23 199.3 -1.8 266 402-680 19-291 (601)
431 PRK09605 bifunctional UGMP fam 99.7 4.8E-16 1E-20 178.0 14.2 145 402-560 332-477 (535)
432 cd05119 RIO RIO kinase family, 99.6 2E-15 4.3E-20 148.0 11.4 143 408-561 2-165 (187)
433 PRK01723 3-deoxy-D-manno-octul 99.6 1.2E-14 2.7E-19 149.9 12.6 142 409-559 37-191 (239)
434 cd05120 APH_ChoK_like Aminogly 99.6 2.3E-14 5E-19 132.4 12.3 134 407-559 2-138 (155)
435 KOG0601 Cyclin-dependent kinas 99.5 9E-14 2E-18 155.4 7.7 263 399-679 110-383 (524)
436 KOG1266 Protein kinase [Signal 99.4 2.3E-13 5E-18 142.3 7.7 207 459-678 119-334 (458)
437 KOG0606 Microtubule-associated 99.4 7.3E-14 1.6E-18 163.2 4.3 268 399-680 800-1097(1205)
438 TIGR01982 UbiB 2-polyprenylphe 99.4 1.6E-12 3.4E-17 145.5 12.8 148 409-562 123-309 (437)
439 PRK04750 ubiB putative ubiquin 99.3 1.9E-12 4E-17 147.5 8.9 149 405-563 122-317 (537)
440 cd05146 RIO3_euk RIO kinase fa 99.3 2.3E-11 5.1E-16 121.9 12.9 145 409-561 3-175 (197)
441 KOG1243 Protein kinase [Genera 99.3 5.1E-11 1.1E-15 135.0 17.0 170 421-614 30-199 (690)
442 cd05151 ChoK Choline Kinase (C 99.3 1.5E-11 3.3E-16 118.1 10.1 129 408-558 3-135 (170)
443 KOG0601 Cyclin-dependent kinas 99.1 5.7E-11 1.2E-15 133.2 6.0 251 401-678 263-517 (524)
444 KOG3741 Poly(A) ribonuclease s 99.1 4.9E-09 1.1E-13 116.0 18.7 213 416-675 289-521 (655)
445 COG3642 Mn2+-dependent serine/ 99.1 1.1E-09 2.3E-14 108.0 11.9 136 409-559 2-140 (204)
446 cd05154 ACAD10_11_like Acyl-Co 99.1 1.3E-09 2.7E-14 108.8 12.5 143 409-559 4-206 (223)
447 KOG3087 Serine/threonine prote 98.9 2E-08 4.4E-13 98.8 12.9 149 407-560 11-166 (229)
448 COG4248 Uncharacterized protei 98.9 5E-08 1.1E-12 105.8 17.0 244 406-672 14-293 (637)
449 PF01163 RIO1: RIO1 family; I 98.9 2.2E-08 4.8E-13 100.0 12.7 132 418-560 1-156 (188)
450 KOG2137 Protein kinase [Signal 98.8 1.7E-09 3.6E-14 123.2 2.7 159 516-680 107-270 (700)
451 COG0478 RIO-like serine/threon 98.8 4.8E-08 1E-12 101.5 11.1 143 405-560 93-252 (304)
452 PRK15123 lipopolysaccharide co 98.7 1.1E-07 2.3E-12 100.2 13.3 137 418-559 37-194 (268)
453 PF06293 Kdo: Lipopolysacchari 98.6 5.4E-07 1.2E-11 91.0 12.3 106 453-560 57-171 (206)
454 COG1718 RIO1 Serine/threonine 98.5 1.8E-06 3.9E-11 89.1 13.2 144 408-561 53-217 (268)
455 COG0661 AarF Predicted unusual 98.4 1.4E-06 3E-11 99.4 11.7 148 409-563 131-318 (517)
456 PRK09902 hypothetical protein; 98.3 6.9E-06 1.5E-10 83.4 11.4 141 411-559 26-179 (216)
457 PF06176 WaaY: Lipopolysacchar 98.2 1.6E-05 3.5E-10 81.1 13.0 147 400-559 28-183 (229)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.4E-05 2.9E-10 82.2 12.4 135 409-558 7-181 (226)
459 PF01636 APH: Phosphotransfera 98.1 2.4E-05 5.2E-10 78.1 12.0 140 408-558 2-196 (239)
460 KOG1235 Predicted unusual prot 98.1 1.7E-05 3.6E-10 90.5 11.7 145 409-562 167-357 (538)
461 KOG1035 eIF-2alpha kinase GCN2 98.0 5.1E-05 1.1E-09 91.5 13.1 207 451-681 226-440 (1351)
462 cd05150 APH Aminoglycoside 3'- 98.0 7.2E-05 1.6E-09 76.8 12.0 135 411-558 6-192 (244)
463 KOG0576 Mitogen-activated prot 97.9 2.1E-06 4.6E-11 97.5 0.3 239 405-679 244-488 (829)
464 PF13095 FTA2: Kinetochore Sim 97.9 0.00014 3.1E-09 73.4 12.8 144 392-557 26-206 (207)
465 cd05155 APH_ChoK_like_1 Unchar 97.9 9.9E-05 2.1E-09 75.6 11.1 29 530-558 165-193 (235)
466 PLN02876 acyl-CoA dehydrogenas 97.8 0.00027 5.9E-09 85.6 14.3 82 408-495 43-131 (822)
467 COG2112 Predicted Ser/Thr prot 97.7 0.00013 2.8E-09 72.0 8.4 131 405-559 24-155 (201)
468 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00034 7.4E-09 70.6 11.3 134 409-553 7-165 (199)
469 KOG2268 Serine/threonine prote 97.7 4.7E-05 1E-09 81.3 5.0 144 404-561 93-253 (465)
470 cd05157 ETNK_euk Ethanolamine 97.6 0.00076 1.6E-08 68.7 12.6 75 408-495 3-79 (235)
471 PF12260 PIP49_C: Protein-kina 97.5 0.00032 6.8E-09 70.2 8.3 102 456-562 8-114 (188)
472 PRK09550 mtnK methylthioribose 97.5 0.0018 4E-08 72.0 14.8 79 408-494 31-117 (401)
473 PRK10593 hypothetical protein; 97.5 0.0016 3.4E-08 69.7 13.5 79 406-495 17-100 (297)
474 KOG2270 Serine/threonine prote 97.4 0.001 2.2E-08 72.4 11.1 150 407-562 148-316 (520)
475 KOG1826 Ras GTPase activating 97.4 9.9E-05 2.2E-09 90.7 3.0 213 454-679 1276-1496(2724)
476 TIGR02721 ycfN_thiK thiamine k 97.3 0.00089 1.9E-08 69.4 9.0 134 411-559 4-175 (256)
477 cd05153 HomoserineK_II Homoser 97.2 0.0012 2.6E-08 69.7 9.1 140 408-559 19-205 (296)
478 KOG1093 Predicted protein kina 97.1 0.0022 4.8E-08 72.3 10.0 162 453-679 28-198 (725)
479 cd05156 ChoK_euk Choline Kinas 97.0 0.005 1.1E-07 65.3 11.3 30 529-558 179-212 (302)
480 TIGR00938 thrB_alt homoserine 97.0 0.0052 1.1E-07 65.6 11.4 141 407-558 26-216 (307)
481 PF09726 Macoilin: Transmembra 96.9 0.12 2.5E-06 61.6 22.2 61 193-253 422-482 (697)
482 TIGR01767 MTRK 5-methylthiorib 96.8 0.0059 1.3E-07 67.0 9.7 82 410-499 2-92 (370)
483 cd05152 MPH2' Macrolide 2'-Pho 96.6 0.012 2.5E-07 62.4 10.4 30 530-559 186-216 (276)
484 PRK05231 homoserine kinase; Pr 96.6 0.024 5.2E-07 60.6 13.0 31 529-559 187-217 (319)
485 PRK12396 5-methylribose kinase 96.4 0.012 2.7E-07 65.3 9.1 84 408-499 34-125 (409)
486 COG3173 Predicted aminoglycosi 96.3 0.045 9.7E-07 59.3 12.4 31 530-560 199-229 (321)
487 PLN02756 S-methyl-5-thioribose 96.3 0.061 1.3E-06 60.1 13.7 83 407-499 36-128 (418)
488 PLN02236 choline kinase 96.2 0.055 1.2E-06 59.1 12.9 142 405-559 38-231 (344)
489 KOG1003 Actin filament-coating 95.9 1.1 2.4E-05 44.7 19.0 130 187-326 9-152 (205)
490 PLN02421 phosphotransferase, a 95.9 0.09 1.9E-06 57.1 12.7 30 530-559 183-213 (330)
491 TIGR02904 spore_ysxE spore coa 95.9 0.062 1.3E-06 57.5 11.3 30 530-559 197-226 (309)
492 TIGR02906 spore_CotS spore coa 95.9 0.062 1.4E-06 56.9 11.1 29 529-558 187-215 (313)
493 PF01633 Choline_kinase: Choli 95.5 0.023 5.1E-07 57.1 5.8 30 530-559 144-174 (211)
494 PF07387 Seadorna_VP7: Seadorn 95.0 0.091 2E-06 54.1 8.3 86 453-556 104-189 (308)
495 COG5072 ALK1 Serine/threonine 94.7 0.066 1.4E-06 58.7 6.6 74 479-559 297-370 (488)
496 PRK11637 AmiB activator; Provi 94.4 2.9 6.3E-05 47.1 19.3 26 297-322 170-195 (428)
497 KOG1236 Predicted unusual prot 94.4 0.1 2.2E-06 58.0 7.1 61 482-544 319-379 (565)
498 PF03881 Fructosamin_kin: Fruc 93.9 0.24 5.2E-06 53.0 8.9 75 406-493 20-97 (288)
499 PRK11637 AmiB activator; Provi 93.9 3.2 7E-05 46.8 18.3 14 309-322 175-188 (428)
500 PTZ00384 choline kinase; Provi 93.8 0.74 1.6E-05 51.2 12.9 79 405-496 52-137 (383)
No 1
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-96 Score=770.11 Aligned_cols=477 Identities=50% Similarity=0.850 Sum_probs=441.5
Q ss_pred HHHHHHHH----HHHHHhhhhhhhHHHHHHHHHHHH----HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 005678 203 RKVAALEE----DLRKSRQNAVDYQNLCHQLEKELK----DVKEYEQQMKPRRTKIISDLLISVSKAERQEARLKIRQES 274 (683)
Q Consensus 203 ~k~~~le~----~l~~~~~e~~~~~~~~~~~e~~l~----e~~~~~~~~~~k~~~~~~~~~~~~~~~~r~~~r~~~~~~~ 274 (683)
.|+++||- ||++++.+++++-+.+..+.+|+. -|.++++.+. ||..++|+|||+++++||..+|.+.|+++
T Consensus 229 ~k~~alE~~k~~DlEkkegriddllRancDlRRQIdEqqk~LEkyKerln-kcv~msKkLLIeKs~qEk~a~RdKsmqDr 307 (775)
T KOG1151|consen 229 EKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLN-KCVTMSKKLLIEKSKQEKMACRDKSMQDR 307 (775)
T ss_pred HHHHHHhhcccchhhhhcchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHHHHhhhhhhhhhc
Confidence 38889884 799999999986655555555544 4555555553 67778899999999999999999999999
Q ss_pred hhcceeeEEeecccchhhcccchhHHHHHHHHHHHHHhHHHHHHHHHhhhccCCCCC--------------------CCc
Q 005678 275 VRLGNVGVIRAGTVISETWEDGQALKDLNAHLRQLLETKEAVERQRKSLKKRQPDKG--------------------DGV 334 (683)
Q Consensus 275 ~rlg~~~~~r~~~~~~e~w~dg~~~~~l~~~~~~~~e~~~~~e~~~k~~~~~~~~~~--------------------~~~ 334 (683)
+|||+|+++|+|++|+|.|+||+||++|.++++++..++++|+++++.++||+|+.. +|.
T Consensus 308 lRlGhFtTvRhGaSFteQWtDG~AFqnl~KqqE~iN~qReeIerqrklLaKRKPp~~gkvqap~~~ne~kqrkskntNGa 387 (775)
T KOG1151|consen 308 LRLGHFTTVRHGASFTEQWTDGYAFQNLIKQQERINSQREEIERQRKLLAKRKPPAMGKVQAPPATNEQKQRKSKNTNGA 387 (775)
T ss_pred ccccceeeeecCccHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcCCCCCCccccccccccCCCcc
Confidence 999999999999999999999999999999999999999999999999999987621 111
Q ss_pred cc-------ccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccCCCCCccccccccceeE
Q 005678 335 DV-------ESGVQEEDLVIQDEIYKSRLASIKREEEAILRERERYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYAL 407 (683)
Q Consensus 335 ~~-------~~~~~~~~~~~~~~~~~~r~~~l~~ee~~~~~~r~~~~~e~~~~~~e~~~~~~~~~~~f~~~~i~~~ry~l 407 (683)
.. -..++..+|.+++++|+.|+..|+++|.++..+.++++..+..+++|++|+..++++.|+++++++++|.+
T Consensus 388 enifrrpeep~~ltlaEYhEqeEIfKLRlgHLkKEEaeiqaElERLErvrnlHiRELKRi~NEdnSQFkDHptLn~RYLl 467 (775)
T KOG1151|consen 388 ENIFRRPEEPETLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHIRELKRIHNEDNSQFKDHPTLNDRYLL 467 (775)
T ss_pred cccccCCCCcccccHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhccCcchHHHHHH
Confidence 11 02366778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEE
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.+||+|||++||+|+|....+|||||+++++..|.++++..|.++++||..|++.|.||.||++|++|.++.+.||.|+
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVL 547 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVL 547 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC---CCCcEEEEecCCccccccCc
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD---EFGVAKVTDFGLSKIVEDDV 564 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd---~~g~vKL~DFGls~~~~~~~ 564 (683)
|||+|.+|+.||+.+..+++.+++.|+.||+.||.||.+..++|||+||||.||||. ..|.+||+||||+++++.+.
T Consensus 548 EYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddS 627 (775)
T KOG1151|consen 548 EYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDS 627 (775)
T ss_pred eecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCc
Confidence 999999999999999999999999999999999999999989999999999999995 47899999999999998764
Q ss_pred C--CCcccccccCCCCCccCCcccccccC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 565 G--SQGMELTSQGAGTYWYLPPECFELSK-TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 565 ~--~~~~~l~~~~~GT~~Y~APE~~~~~~-~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
. ..+|+++++++||+||+|||||..++ .|.+++++||||+|||||+|++|+.||++...+..|+...+|+++..+.|
T Consensus 628 y~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqF 707 (775)
T KOG1151|consen 628 YNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQF 707 (775)
T ss_pred cCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccC
Confidence 3 46899999999999999999998776 46799999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
|..|.++.++++||++||.|..++|.++.+|+.||||..
T Consensus 708 P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 708 PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 999999999999999999999999999999999999975
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-52 Score=443.01 Aligned_cols=270 Identities=30% Similarity=0.443 Sum_probs=228.6
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
.+++.|.+.+.||+|+||.|-+|+++.+|+.||||++.................+.+|++||++|.|||||+++++|. .
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~-~ 247 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE-V 247 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee-c
Confidence 367889999999999999999999999999999999866543221111122344679999999999999999999997 6
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC---CcEEEEecCC
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF---GVAKVTDFGL 556 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~---g~vKL~DFGl 556 (683)
.+..|+||||++||+|.+.+-.++.+.+...+.+++||+.||.|||+.| |+||||||+|||+..+ ..+||+|||+
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcC--cccccCCcceEEeccCCcceEEEecccch
Confidence 7788999999999999999999999999999999999999999999966 9999999999999865 7899999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
|+..... .++.+.+|||.|.|||++...+...+..++|+||+||+||-||+|.+||........+. ..+..
T Consensus 326 AK~~g~~------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~---eQI~~ 396 (475)
T KOG0615|consen 326 AKVSGEG------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLK---EQILK 396 (475)
T ss_pred hhccccc------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHH---HHHhc
Confidence 9987533 45667799999999999987776666679999999999999999999997655443222 12233
Q ss_pred hccCC--CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 637 RKVEF--PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 637 ~~~~~--p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+.+.| +.|..++.++.+||.+||..||++|||+.++|+||||+.+
T Consensus 397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA 443 (475)
T ss_pred CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence 33333 4567899999999999999999999999999999999854
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-50 Score=440.85 Aligned_cols=256 Identities=39% Similarity=0.588 Sum_probs=225.6
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
.+|...++||+|||+.||.+.+..+|..||+|++..... .+......+.+||.|++.|+|||||++|++|+ |.++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l----~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE-Ds~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL----KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE-DSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHh----cCcchHHHHHHHHHHHHhcCCCcEEeeeeEee-cCCc
Confidence 579999999999999999999999999999999865432 23334567889999999999999999999997 8899
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
.|||+|+|+.++|..++++.++++|.+++.++.||+.||.|||+.+ |||||||.+||||+++.++||+|||||..+..
T Consensus 93 VYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred eEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcC--ceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999999999999999999999999999999999999966 99999999999999999999999999998875
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
+. +...+.+|||.|+|||++...+ ++..+||||+||+||.||+|++||....-.+.+.. +....+.+|
T Consensus 171 ~~-----Erk~TlCGTPNYIAPEVl~k~g---HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~----Ik~~~Y~~P 238 (592)
T KOG0575|consen 171 DG-----ERKKTLCGTPNYIAPEVLNKSG---HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNK----IKLNEYSMP 238 (592)
T ss_pred cc-----cccceecCCCcccChhHhccCC---CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHH----HHhcCcccc
Confidence 42 1233459999999999998444 89999999999999999999999987666554422 344455555
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
. .+|.++++||.++|..||.+|||+.+++.|+||+
T Consensus 239 ~--~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 239 S--HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred c--ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 4 7999999999999999999999999999999994
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-50 Score=419.76 Aligned_cols=264 Identities=28% Similarity=0.456 Sum_probs=224.2
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
+.....+.+..||+|..|+||++.++.++..+|+|++..+.. ....+.+.+|+.|+...+||+||.+|++|..+
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~------~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~ 149 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNID------PALQKQILRELEILRSCQSPYIVGFYGAFYSN 149 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCC------HHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC
Confidence 444567778999999999999999999999999999855432 34457889999999999999999999999744
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
...++|+||||++|+|+.+++..+.+++..+..|+.+|++||.|||.. ++||||||||+|||++..|.+||||||.++.
T Consensus 150 ~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~-~~IIHRDIKPsNlLvNskGeVKicDFGVS~~ 228 (364)
T KOG0581|consen 150 GEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE-RKIIHRDIKPSNLLVNSKGEVKICDFGVSGI 228 (364)
T ss_pred CceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc-cCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence 436999999999999999999989999999999999999999999963 4699999999999999999999999999998
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-chHHHHHH-HHHHHHhh
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHD-QTQERILR-EDTIIKAR 637 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~-~~~e~il~-~~~i~~~~ 637 (683)
+.+. +....+||..|||||.+.+.. |+.++||||||+.++||++|+.||... .....++. ...|....
T Consensus 229 lvnS-------~a~tfvGT~~YMsPERi~g~~---Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p 298 (364)
T KOG0581|consen 229 LVNS-------IANTFVGTSAYMSPERISGES---YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP 298 (364)
T ss_pred hhhh-------hcccccccccccChhhhcCCc---CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC
Confidence 7654 345569999999999998665 899999999999999999999999774 11112221 12333334
Q ss_pred ccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 638 KVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 638 ~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.+.+|.. .+|+++.+||..||.+||.+|||+.++++|||++..
T Consensus 299 pP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 299 PPRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred CCCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 4455543 599999999999999999999999999999999853
No 5
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.6e-48 Score=421.95 Aligned_cols=269 Identities=28% Similarity=0.438 Sum_probs=234.6
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
+-.+.|.++..||+|+||+||+|..+.||.++|+|++..+ +......+.|++.|-.||....+|+||+||..|+ +
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS----~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQ-D 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS----EMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQ-D 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHH----HHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEec-C
Confidence 3457799999999999999999999999999999998664 3445566899999999999999999999999997 8
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
..++||||||++|||+..+|...+.|++..++.++.+++.||..||+.| ||||||||+|+|||..|++||+|||||..
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcC--cccccCChhheeecCCCCEeeccccccch
Confidence 9999999999999999999999999999999999999999999999976 99999999999999999999999999964
Q ss_pred cccCc----------------CCCc--------c------------------cccccCCCCCccCCcccccccCCCCCCc
Q 005678 560 VEDDV----------------GSQG--------M------------------ELTSQGAGTYWYLPPECFELSKTPLISS 597 (683)
Q Consensus 560 ~~~~~----------------~~~~--------~------------------~l~~~~~GT~~Y~APE~~~~~~~~~~s~ 597 (683)
+.... .... . .+....+|||.|||||++.+.+ |+.
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg---Y~~ 367 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG---YGK 367 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC---CCc
Confidence 43210 0000 0 0111248999999999998665 899
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCC---CHHHHhc
Q 005678 598 KVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERP---DVLTLAQ 674 (683)
Q Consensus 598 ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRP---S~~eLl~ 674 (683)
.+|+|||||||||||.|.+||......+.+-. .+.+...+.||....++.++++||.+||+ ||.+|. .+.+|-.
T Consensus 368 ~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rk--I~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 368 ECDWWSLGCIMYEMLVGYPPFCSETPQETYRK--IVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 99999999999999999999999888876643 44566678899999999999999999999 999998 5999999
Q ss_pred CcccCCC
Q 005678 675 DPYLTYS 681 (683)
Q Consensus 675 hP~l~~~ 681 (683)
||||+..
T Consensus 445 HPfF~~v 451 (550)
T KOG0605|consen 445 HPFFKGV 451 (550)
T ss_pred CCccccC
Confidence 9999864
No 6
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-48 Score=407.88 Aligned_cols=259 Identities=32% Similarity=0.491 Sum_probs=223.9
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
-.+.|.++++||+|+||+||.++...+++.||+|++........ ..+++...|..||..++||.||.++..|+ +.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~----~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ-t~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK----KEVRHTKAERNILSKIKHPFIVKLIYSFQ-TE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh----hhHHHHHHHHHHHHhCCCCcEeeeEEecc-cC
Confidence 35689999999999999999999999999999999876544322 34678899999999999999999999997 78
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..+|+|+||+.||.|..+|.+.+.+++..++.++.+|+.||.|||+.+ ||||||||+|||||..|+++|+|||||+..
T Consensus 98 ~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG--IIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 899999999999999999999999999999999999999999999976 999999999999999999999999999965
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
-... ..+...+||+.|||||++...+ |+..||+|||||++|+||+|.+||........+- .+....
T Consensus 176 ~~~~-----~~t~tfcGT~eYmAPEil~~~g---y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~---~I~~~k--- 241 (357)
T KOG0598|consen 176 LKDG-----DATRTFCGTPEYMAPEILLGKG---YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYD---KILKGK--- 241 (357)
T ss_pred ccCC-----CccccccCCccccChHHHhcCC---CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHH---HHhcCc---
Confidence 4332 2244569999999999998665 9999999999999999999999998776654332 222222
Q ss_pred CCCCc-CCCHHHHHHHHHhcccCCCCCC----CHHHHhcCcccCC
Q 005678 641 FPSRP-AVSNEAKDLIRRCLTYNQAERP----DVLTLAQDPYLTY 680 (683)
Q Consensus 641 ~p~~~-~~s~el~dLI~rCL~~dP~kRP----S~~eLl~hP~l~~ 680 (683)
.+..+ .++.++++||.++|..+|++|. ++.++-+||||.-
T Consensus 242 ~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 242 LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence 22233 4899999999999999999995 7999999999964
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-46 Score=396.01 Aligned_cols=259 Identities=31% Similarity=0.507 Sum_probs=220.6
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|.+...||+|+||+||+|..+.++..||||.+..... .......+..|+.||+.++|||||.|++++. .++.
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-----~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~-~~~~ 83 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-----NKKLVELLLSEIKILKELKHPNIVRLLDCIE-DDDF 83 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-----CHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-cCCe
Confidence 468888889999999999999999999999998755422 1233567889999999999999999999987 7789
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC------CcEEEEecCC
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF------GVAKVTDFGL 556 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~------g~vKL~DFGl 556 (683)
+|+|||||.||||.++|...+.+++..++.++.||+.||.+||+.+ ||||||||.||||+.+ -.+||+|||+
T Consensus 84 i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENN--IIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 9999999999999999999989999999999999999999999955 9999999999999864 4699999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
|+.+... .+..+.+|+|.|||||++...+ |+.|+|+||+|+|+|+|++|+.||......+-.. .+.+.
T Consensus 162 AR~L~~~------~~a~tlcGSplYMAPEV~~~~~---YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~---~~~k~ 229 (429)
T KOG0595|consen 162 ARFLQPG------SMAETLCGSPLYMAPEVIMSQQ---YDAKADLWSIGTILYQCLTGKPPFDAETPKELLL---YIKKG 229 (429)
T ss_pred hhhCCch------hHHHHhhCCccccCHHHHHhcc---ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH---HHhcc
Confidence 9998744 3345569999999999998666 9999999999999999999999998877766554 22233
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
..+.......+++.+.+++...|..+|.+|.+..+-+.||++...
T Consensus 230 ~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 230 NEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN 274 (429)
T ss_pred ccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence 332222234577788899999999999999999999999988643
No 8
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-46 Score=381.47 Aligned_cols=255 Identities=32% Similarity=0.490 Sum_probs=226.9
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
-+.|.++..||.|+||.|.+++.+.+|.++|+|++... ...+...+.|..+|..||+.+.||+++.|++.|. +..
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~----~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~-d~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ----KVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK-DNS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHH----HHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-cCC
Confidence 45688999999999999999999999999999998543 3345566889999999999999999999999996 888
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+|+||||.+||.|.++|++.+.+++..++.++.+|+.||.|||+.+ |++|||||+|||||.+|.+||+|||+|+.+.
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~G~iKitDFGFAK~v~ 195 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQNGHIKITDFGFAKRVS 195 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccCCcEEEEeccceEEec
Confidence 99999999999999999999999999999999999999999999865 9999999999999999999999999999886
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.. +.+.+|||.|+|||.+...+ |...+|+|||||++|||+.|.+||......... .-+....+.|
T Consensus 196 ~r--------T~TlCGTPeYLAPEii~sk~---ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY----~KI~~~~v~f 260 (355)
T KOG0616|consen 196 GR--------TWTLCGTPEYLAPEIIQSKG---YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIY----EKILEGKVKF 260 (355)
T ss_pred Cc--------EEEecCCccccChHHhhcCC---CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHH----HHHHhCcccC
Confidence 42 45569999999999997655 889999999999999999999999888774332 2245567778
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTY 680 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~ 680 (683)
| +.++.++++||.++|+.|-.+|. -..+|-.||||.-
T Consensus 261 P--~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 261 P--SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred C--cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 7 46999999999999999999994 4678999999974
No 9
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-46 Score=402.95 Aligned_cols=263 Identities=31% Similarity=0.469 Sum_probs=223.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~ 481 (683)
+.|.+++.||.|+|++||+|.+..+++.||||++..... .++.-++.+.+|-.+|..| .||.|++||..|+ |..
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~I----ike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ-D~~ 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYI----IKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ-DEE 147 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHH----HhhcccchhhHHHHHHHHhhCCCCeEEEEEEee-ccc
Confidence 468889999999999999999999999999999754322 2333356678899999999 8999999999997 888
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+|+|+||+++|+|.++|++.+.|++.-++.++.+|+.||.|||+.| ||||||||+|||||.+|++||+|||.|+.+.
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~G--IIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG--IIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 99999999999999999999999999999999999999999999966 9999999999999999999999999999987
Q ss_pred cCcCCC------cc--cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Q 005678 562 DDVGSQ------GM--ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI 633 (683)
Q Consensus 562 ~~~~~~------~~--~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i 633 (683)
...... .. ......+||..|.+||++.... .++.+|||+||||||+|+.|.+||......-.+..
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~---~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk---- 298 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP---AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK---- 298 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCC---CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH----
Confidence 653220 00 0114479999999999997554 78899999999999999999999987665433321
Q ss_pred HHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 634 IKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 634 ~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+....+.|| +.+++.+.+||.++|..||.+|+++.+|-.||||...
T Consensus 299 I~~l~y~fp--~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 299 IQALDYEFP--EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred HHHhcccCC--CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 233344444 6899999999999999999999999999999999754
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.1e-46 Score=381.80 Aligned_cols=262 Identities=24% Similarity=0.450 Sum_probs=219.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|+.+..+|+|+||.||+|+++.||..||||.+.-+. .....-+.++||+.+|++|+|||+|.|+.+|. ....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-----dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr-rkrk 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-----DDPVVKKIALREIRMLKQLKHENLVNLIEVFR-RKRK 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-----ccHHHHHHHHHHHHHHHhcccchHHHHHHHHH-hcce
Confidence 46888999999999999999999999999999985432 22334567899999999999999999999997 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+++|+|||+..-|+.+-.....++...+..|++|++.|+.|+|+ +++|||||||+||||+.+|.+||||||+|+.+..
T Consensus 76 lhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk--~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 76 LHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHK--NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred eEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhh--cCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 99999999776565555555569999999999999999999998 4599999999999999999999999999998864
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA------ 636 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~------ 636 (683)
.. ..+...+.|.||.|||.+.+.. .|...+|||++||++.||++|.+.|.+..+.+.++........
T Consensus 154 pg-----d~YTDYVATRWYRaPELLvGDt--qYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq 226 (396)
T KOG0593|consen 154 PG-----DNYTDYVATRWYRAPELLVGDT--QYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQ 226 (396)
T ss_pred Cc-----chhhhhhhhhhccChhhhcccC--cCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHH
Confidence 21 2344568999999999987643 3899999999999999999999999998888877653322111
Q ss_pred ---------hccCCCCC----------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 637 ---------RKVEFPSR----------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 637 ---------~~~~~p~~----------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
..+.+|.+ |.++.-+.+|+..||..||.+|++.++++.||||.
T Consensus 227 ~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 227 SIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred HHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 11223322 56778899999999999999999999999999995
No 11
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-45 Score=399.16 Aligned_cols=265 Identities=32% Similarity=0.471 Sum_probs=222.8
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeecccccc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEI 478 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~ 478 (683)
....+|.+.+.||+|+||.|+.|.+..++..||+|++....... .. ......+.+|+.+++.++ ||||+++++++..
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~-~~-~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t 91 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS-KS-QKLDELIKREISILRRLRSHPNIIRLLEVFAT 91 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccc-cc-cccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence 45679999999999999999999999999999999875542211 11 123456668999999999 9999999999974
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC-CcEEEEecCCc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF-GVAKVTDFGLS 557 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~-g~vKL~DFGls 557 (683)
...+++|||||.||+|.+++...+.+++.+++.++.|++.|+.|||+.+ |+||||||+|||++.+ +++||+|||++
T Consensus 92 -~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 92 -PTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRG--IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred -CCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 5559999999999999999988889999999999999999999999966 9999999999999998 99999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
...... .......+||+.|+|||++..... .-..++||||+||+||.|++|..||........... +...
T Consensus 169 ~~~~~~-----~~~l~t~cGsp~Y~aPEvl~~~~~-Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----i~~~ 238 (370)
T KOG0583|consen 169 AISPGE-----DGLLKTFCGSPAYAAPEVLSGKGT-YSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----IRKG 238 (370)
T ss_pred cccCCC-----CCcccCCCCCcccCCHHHhCCCCC-cCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----HhcC
Confidence 987411 134556699999999999975442 124789999999999999999999988554433322 4555
Q ss_pred ccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 638 KVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 638 ~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.+.+|.+-. |.++.+||.+||..||.+|+++.+++.||||+.
T Consensus 239 ~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 239 EFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 566665422 999999999999999999999999999999986
No 12
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-45 Score=387.57 Aligned_cols=273 Identities=24% Similarity=0.382 Sum_probs=232.3
Q ss_pred ccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccc
Q 005678 396 NNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDT 475 (683)
Q Consensus 396 ~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~ 475 (683)
..|++....|.+...||.|..++||+|+...++.+||||++.+. +....+..+.+|+..++.++||||+.++.+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLE------kc~~~ld~l~kE~~~msl~~HPNIv~~~~s 92 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLE------KCNNDLDALRKEVQTMSLIDHPNIVTYHCS 92 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehh------hhhhhHHHHHHHHHHhhhcCCCCcceEEEE
Confidence 56788889999999999999999999999999999999998664 334457889999999999999999999999
Q ss_pred cccCCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEe
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTD 553 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~D 553 (683)
|. .+..+++||.||.+|++.++++.. ..+.+..+..|+++++.||.|||..| .||||||+.||||+.+|.|||+|
T Consensus 93 Fv-v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~dG~VkLad 169 (516)
T KOG0582|consen 93 FV-VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSDGTVKLAD 169 (516)
T ss_pred EE-ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCCCcEEEcC
Confidence 96 678899999999999999999654 34899999999999999999999966 99999999999999999999999
Q ss_pred cCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Q 005678 554 FGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI 633 (683)
Q Consensus 554 FGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i 633 (683)
||.+-.+..........+ ...+|||+|||||++.....+ |+.|+||||||++.+||.+|..||....+...++..
T Consensus 170 Fgvsa~l~~~G~R~~~rf-~tfvgtp~wmAPEvl~q~~~G-YdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--- 244 (516)
T KOG0582|consen 170 FGVSASLFDSGDRQVTRF-NTFVGTPCWMAPEVLMQQLHG-YDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--- 244 (516)
T ss_pred ceeeeeecccCceeeEee-ccccCcccccChHHhhhcccC-ccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH---
Confidence 999887776543333333 677999999999996544433 999999999999999999999999988887766531
Q ss_pred HHhhcc-------CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 634 IKARKV-------EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 634 ~~~~~~-------~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
++...+ .......++..++.+|..||.+||.+|||+.++++|+||+.+|
T Consensus 245 Lqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 245 LQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred hcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 112111 1111245677899999999999999999999999999999886
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-45 Score=386.08 Aligned_cols=262 Identities=29% Similarity=0.473 Sum_probs=212.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc-
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN- 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~- 481 (683)
.+|...+.||+|+||.||++.+..+|..+|||.......+. ...+.+|+.+|++++|||||++++......+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-------~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~ 89 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-------SESLEREIRILSRLNHPNIVQYYGSSSSREND 89 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-------HHHHHHHHHHHHhCCCCCEEeeCCccccccCe
Confidence 45788999999999999999999999999999876542211 4568899999999999999999997543444
Q ss_pred eEEEEEecccCCChhHHHhcCC-CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCcEEEEecCCccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATP-VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGVAKVTDFGLSKI 559 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~-~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~vKL~DFGls~~ 559 (683)
.++|+|||+++|+|.+++...+ .|++..++.+..||+.||.|||+++ ||||||||+|||++. +|.+||+|||+++.
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeCCCCeEEeccCccccc
Confidence 7999999999999999998776 7999999999999999999999865 999999999999999 79999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-chHHHHHHHHHHHHhhc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHD-QTQERILREDTIIKARK 638 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~-~~~e~il~~~~i~~~~~ 638 (683)
..... ..........||+.|||||++..+. ....++|||||||++.||+||.+||... .....++... ...
T Consensus 168 ~~~~~--~~~~~~~~~~Gtp~~maPEvi~~g~--~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig----~~~ 239 (313)
T KOG0198|consen 168 LESKG--TKSDSELSVQGTPNYMAPEVIRNGE--VARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIG----RED 239 (313)
T ss_pred ccccc--ccccccccccCCccccCchhhcCCC--cCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHh----ccC
Confidence 76311 1111233458999999999997522 1235899999999999999999999763 3333332211 111
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
...+.+..+|.++++||.+|+..+|..|||+.++|.|||++..
T Consensus 240 ~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 240 SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 1112334699999999999999999999999999999999764
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-46 Score=376.65 Aligned_cols=248 Identities=28% Similarity=0.527 Sum_probs=206.9
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecc-ccccCCc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWD-TFEIDQN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~-~f~~d~~ 481 (683)
..|.+++.||+|+||+||++.+..+|..||.|-++.... ..........|+.+|++|+|||||++|+ .|..+..
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-----d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e 93 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-----DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE 93 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-----cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence 458899999999999999999999999999998763322 1222457789999999999999999998 5654555
Q ss_pred eEEEEEecccCCChhHHHh----cCCCcchHHHHHHHHHHHHHHHHHHhcCCc--eEecccCCcceEeCCCCcEEEEecC
Q 005678 482 TFCTVLEYCSGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQK--IIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~--IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
.++||||||.+|+|..+++ ....+++..++.++.|++.||..+|..-+. |+||||||.||+|+.+|.+||+|||
T Consensus 94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence 5999999999999999994 446799999999999999999999984333 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~ 635 (683)
+++.+.... ..+...+|||.||+||.+...+ |+.++||||+||++|||+.-++||....-.+ ...-+.
T Consensus 174 L~r~l~s~~-----tfA~S~VGTPyYMSPE~i~~~~---Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~----L~~KI~ 241 (375)
T KOG0591|consen 174 LGRFLSSKT-----TFAHSLVGTPYYMSPERIHESG---YNFKSDIWSLGCLLYEMCALQSPFYGDNLLS----LCKKIE 241 (375)
T ss_pred hHhHhcchh-----HHHHhhcCCCcccCHHHHhcCC---CCcchhHHHHHHHHHHHHhcCCCcccccHHH----HHHHHH
Confidence 999987543 3455669999999999997666 9999999999999999999999998774322 112222
Q ss_pred hhccCCCCC--cCCCHHHHHHHHHhcccCCCCCCCH
Q 005678 636 ARKVEFPSR--PAVSNEAKDLIRRCLTYNQAERPDV 669 (683)
Q Consensus 636 ~~~~~~p~~--~~~s~el~dLI~rCL~~dP~kRPS~ 669 (683)
.. .+|.. ...|.++..+|..|+..||..||+.
T Consensus 242 qg--d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 242 QG--DYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred cC--CCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 22 34422 3678999999999999999999985
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-45 Score=392.47 Aligned_cols=265 Identities=29% Similarity=0.455 Sum_probs=224.0
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeecccccc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEI 478 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~ 478 (683)
++-++|.+++.||.|.||.||+|....+|..||||.++.....-++ -.-+||+..|++|+ |||||+|++++..
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee------~~nLREvksL~kln~hpniikL~Evi~d 80 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEE------CMNLREVKSLRKLNPHPNIIKLKEVIRD 80 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHH------HHHHHHHHHHHhcCCCCcchhhHHHhhc
Confidence 4567999999999999999999999999999999987554332111 13478999999999 9999999999974
Q ss_pred CCceEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
....+++|||||+ .+|..+++ +...|++..++.|+.||+.||+|+|.+| ++||||||+|||+.....+||+|||+|
T Consensus 81 ~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~~~~~iKiaDFGLA 157 (538)
T KOG0661|consen 81 NDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILISGNDVIKIADFGLA 157 (538)
T ss_pred cCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEecccceeEecccccc
Confidence 4449999999995 58999995 4578999999999999999999999966 999999999999998899999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH--
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK-- 635 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~-- 635 (683)
+-+... ......+.|.||.|||++.... .|+.++|||++|||++|+.+-++.|.+....+.++..-.++.
T Consensus 158 Rev~Sk------pPYTeYVSTRWYRAPEvLLrs~--~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP 229 (538)
T KOG0661|consen 158 REVRSK------PPYTEYVSTRWYRAPEVLLRSG--YYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTP 229 (538)
T ss_pred cccccC------CCcchhhhcccccchHHhhhcc--ccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCC
Confidence 987643 3455668999999999987543 599999999999999999999999999998888876443322
Q ss_pred -------------hhccCCCCC---------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 636 -------------ARKVEFPSR---------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 636 -------------~~~~~~p~~---------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.-.+.||.. +.++.++.++|.+||.+||.+|||+.++++||||+..
T Consensus 230 ~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 230 DKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred ccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 122334432 4578999999999999999999999999999999975
No 16
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=395.18 Aligned_cols=258 Identities=28% Similarity=0.485 Sum_probs=228.3
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|.....||+|+.|.||.|....++..||||.+.+..+... +-++.|+.+|+...|+|||.+++.|.. ++.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k-------eLilnEi~Vm~~~~H~NiVnfl~Sylv-~de 344 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK-------ELLLNEILVMRDLHHPNIVNFLDSYLV-GDE 344 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch-------hhhHHHHHHHHhccchHHHHHHHHhcc-cce
Confidence 467778899999999999999999999999999877655433 367899999999999999999999974 578
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+++|||||+||+|.+++.... +++.++..|+++++.||+|||..+ |||||||.+|||++.+|.+||+|||+|..+..
T Consensus 345 LWVVMEym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVTKTR-MTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred eEEEEeecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 999999999999999998765 999999999999999999999966 99999999999999999999999999988765
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
... .....+|||+|||||++.... |.+++||||||++++||+-|.+||-.......++ .|...+...+.
T Consensus 422 ~~~-----KR~TmVGTPYWMAPEVvtrk~---YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly---LIa~ng~P~lk 490 (550)
T KOG0578|consen 422 EQS-----KRSTMVGTPYWMAPEVVTRKP---YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPKLK 490 (550)
T ss_pred ccC-----ccccccCCCCccchhhhhhcc---cCccccchhhhhHHHHHhcCCCCccCCChHHHHH---HHhhcCCCCcC
Confidence 532 234459999999999987554 8999999999999999999999998766655443 45667777888
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.+..+|..+++|+.+||..|+.+|+++.+||+||||+.++
T Consensus 491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 8889999999999999999999999999999999998875
No 17
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-44 Score=386.73 Aligned_cols=259 Identities=27% Similarity=0.425 Sum_probs=210.4
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeE-EEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRY-VACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~-VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
+.+......+...||.|+||+||+|. ..|.. ||||++......... ...|.+|+.+|.+++|||||+++|++
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~--~~g~~~vavK~~~~~~~~~~~-----~~~f~~E~~il~~l~HpNIV~f~G~~ 108 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGK--WRGTDVVAVKIISDPDFDDES-----RKAFRREASLLSRLRHPNIVQFYGAC 108 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEE--eCCceeEEEEEecchhcChHH-----HHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 34444555666779999999999995 56666 999998654332222 67899999999999999999999999
Q ss_pred ccCCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-cEEEEe
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG-VAKVTD 553 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g-~vKL~D 553 (683)
......++|||||+++|+|..++.. ...+++..+..++.+|+.||.|||+.++ ||||||||.|||++.++ ++||+|
T Consensus 109 ~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~~~~~~KI~D 187 (362)
T KOG0192|consen 109 TSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDLKGKTLKIAD 187 (362)
T ss_pred cCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcCCCCEEEECC
Confidence 7444379999999999999999966 6789999999999999999999999654 99999999999999998 999999
Q ss_pred cCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Q 005678 554 FGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI 633 (683)
Q Consensus 554 FGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i 633 (683)
||+++...... . . .....||+.|||||++... ...|+.|+|||||||++|||+||..||........+.. ..
T Consensus 188 FGlsr~~~~~~--~--~-~~~~~GT~~wMAPEv~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~--v~ 259 (362)
T KOG0192|consen 188 FGLSREKVISK--T--S-MTSVAGTYRWMAPEVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASA--VV 259 (362)
T ss_pred Cccceeecccc--c--c-ccCCCCCccccChhhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHH--HH
Confidence 99998765431 1 1 1124899999999999854 33499999999999999999999999988777333321 22
Q ss_pred HHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 634 IKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 634 ~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+.+| ..+++.+..||.+||..||..||++.+++.
T Consensus 260 ~~~~Rp~~p--~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 260 VGGLRPPIP--KECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred hcCCCCCCC--ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 233333333 349999999999999999999999998863
No 18
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.2e-43 Score=366.76 Aligned_cols=261 Identities=22% Similarity=0.392 Sum_probs=210.7
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||+|+||.||+|.+..++..||||++....... .....+.+|+.+++.++||||++++++|. ..+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~ 74 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-----EVKETTLRELKMLRTLKQENIVELKEAFR-RRGK 74 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccc-----cchhhHHHHHHHHHhCCCccccchhhhEe-cCCE
Confidence 47999999999999999999999999999999986543221 22456778999999999999999999996 6678
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|..+......+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 75 LYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9999999998888776665667999999999999999999999865 99999999999999999999999999987643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA------ 636 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~------ 636 (683)
.... ......||+.|+|||++.... ++.++|||||||++|+|++|++||......+.......+...
T Consensus 153 ~~~~----~~~~~~~~~~y~aPE~~~~~~---~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd07848 153 GSNA----NYTEYVATRWYRSPELLLGAP---YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQM 225 (287)
T ss_pred cccc----cccccccccccCCcHHHcCCC---CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHH
Confidence 2211 122347899999999986443 788999999999999999999999876554433221111100
Q ss_pred ---------hccCCCC-----------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 637 ---------RKVEFPS-----------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 637 ---------~~~~~p~-----------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
....++. ...+|.++.+||.+||.+||.+|||+.++++||||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 226 KLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0111111 12378889999999999999999999999999998
No 19
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.3e-43 Score=371.48 Aligned_cols=254 Identities=30% Similarity=0.437 Sum_probs=213.6
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||+|+||.||+|.+..+++.||||++.... .........+.+|+.+++.++||||+++++++. +.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPE----VIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH-DQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHH----HhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc-cCCe
Confidence 36889999999999999999999999999999875421 111223456889999999999999999999886 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|.+++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999999999999988888999999999999999999999965 99999999999999999999999999986643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
. .....||+.|+|||++.... ++.++|||||||++|+|++|..||.......... . +......+|
T Consensus 154 ~--------~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~---~-i~~~~~~~~ 218 (291)
T cd05612 154 R--------TWTLCGTPEYLAPEVIQSKG---HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE---K-ILAGKLEFP 218 (291)
T ss_pred C--------cccccCChhhcCHHHHcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---H-HHhCCcCCC
Confidence 2 11236999999999986443 7899999999999999999999998765433221 1 122233333
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTY 680 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~ 680 (683)
..++..+.+||.+||..||.+||+ +.+++.||||+.
T Consensus 219 --~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 219 --RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred --ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 457899999999999999999995 999999999974
No 20
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=385.47 Aligned_cols=273 Identities=29% Similarity=0.474 Sum_probs=223.9
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccch-------hhHHHHHHHHHHHHHHHhhcCCCceeeecc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSE-------DKKQSYIRHAIREYNIHKTLVHHHIVRLWD 474 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~-------~~~~~~i~~~~rEi~il~~L~HpnIV~L~~ 474 (683)
-++|.++..||+|.||.|-+|++..+++.||||++........ .....-++...+|+.||+++.|||||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 3579999999999999999999999999999999865422111 011122457889999999999999999999
Q ss_pred cccc-CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEe
Q 005678 475 TFEI-DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTD 553 (683)
Q Consensus 475 ~f~~-d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~D 553 (683)
+... ..+.+|||+|||..|.+...=.....+++.+++.|+.+++.||.|||..+ ||||||||+|+||+++|++||+|
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~g~VKIsD 253 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSDGTVKISD 253 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCCCcEEeec
Confidence 8752 35679999999988877655433334999999999999999999999855 99999999999999999999999
Q ss_pred cCCccccccCcCCCcccccccCCCCCccCCcccccccC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Q 005678 554 FGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK-TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT 632 (683)
Q Consensus 554 FGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~-~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~ 632 (683)
||.+..................+|||.|+|||++..+. ....+.+.||||+||+||.|++|..||-.....+.. .
T Consensus 254 FGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~----~ 329 (576)
T KOG0585|consen 254 FGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF----D 329 (576)
T ss_pred cceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH----H
Confidence 99998775443222222333469999999999987654 233467889999999999999999999766554432 3
Q ss_pred HHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 633 IIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 633 i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
-+....+.||..+.+..++++||.+||++||..|.++.++..|||...
T Consensus 330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 356778899999999999999999999999999999999999999864
No 21
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9.5e-44 Score=383.77 Aligned_cols=265 Identities=28% Similarity=0.444 Sum_probs=217.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+++.||+|+||+||+|.+..+++.||||++..... ........+.+|+.++..++||||++++++|. +.+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM----LEKEQVAHVRAERDILAEADNPWVVKLYYSFQ-DENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh----hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-cCCe
Confidence 368999999999999999999999999999999854211 12234567888999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.+|.++|+|||++..+..
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 9999999999999999988888999999999999999999999965 99999999999999999999999999976532
Q ss_pred CcCCCcc---------------------------------cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHH
Q 005678 563 DVGSQGM---------------------------------ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFY 609 (683)
Q Consensus 563 ~~~~~~~---------------------------------~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILy 609 (683)
....... ......+||+.|+|||++.... ++.++|||||||++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~ 230 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG---YNKECDWWSLGVIMY 230 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC---CCCeeeeecchhHHH
Confidence 2110000 0111246999999999986443 889999999999999
Q ss_pred HHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccCC
Q 005678 610 QMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPD---VLTLAQDPYLTY 680 (683)
Q Consensus 610 ELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS---~~eLl~hP~l~~ 680 (683)
+|++|..||......+.... .+.....+.+|....+++++.+||.+||. +|.+|++ +.+++.||||..
T Consensus 231 el~~G~~Pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 231 EMLVGYPPFCSDNPQETYRK--IINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred HhhcCCCCCCCCCHHHHHHH--HHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 99999999987765543321 11122334555555789999999999997 9999998 999999999975
No 22
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.8e-43 Score=381.27 Aligned_cols=267 Identities=25% Similarity=0.415 Sum_probs=215.0
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+++.||+|+||+||+|.+..++..||||++.... .........+.+|+.++..++||||++++++|. +...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~-~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKAD----MLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ-DKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHH----HHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCe
Confidence 36889999999999999999999999999999985421 112233567888999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||+.+ ||||||||+|||++.+|.+||+|||+++.+..
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 9999999999999999988888999999999999999999999865 99999999999999999999999999976532
Q ss_pred CcCCC------------------------------cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH
Q 005678 563 DVGSQ------------------------------GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML 612 (683)
Q Consensus 563 ~~~~~------------------------------~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL 612 (683)
..... ........+||+.|+|||++.... ++.++|||||||++|+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~---~~~~~DvwSlGvil~ell 230 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTG---YNKLCDWWSLGVIMYEML 230 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCC---CCCchhhhhhHHHHHHHH
Confidence 11000 000112347999999999986543 889999999999999999
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcc--cCCCCCCCHHHHhcCcccCCC
Q 005678 613 FGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLT--YNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 613 tG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~--~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+|..||......+.+.. .......+.+|....+++++++||.+++. .++..||++.++++||||+..
T Consensus 231 ~G~~Pf~~~~~~~~~~~--i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 231 IGYPPFCSETPQETYKK--VMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred hCCCCCCCCCHHHHHHH--HHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCC
Confidence 99999987665443321 11112334566656789999999999765 233456899999999999753
No 23
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-43 Score=378.34 Aligned_cols=255 Identities=30% Similarity=0.444 Sum_probs=215.5
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||+|+||.||+|.+..++..||||++.... .........+.+|+.+++.++||||++++++|. +.+.
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~ 92 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE----ILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-DENR 92 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH----HhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-cCCE
Confidence 57999999999999999999999999999999875421 112233567889999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|.+++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.....
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 9999999999999999988888999999999999999999999965 99999999999999999999999999986643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
.. ....||+.|+|||++.... ++.++|||||||++|+|++|..||.......... .+....+.+|
T Consensus 171 ~~--------~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~----~i~~~~~~~p 235 (329)
T PTZ00263 171 RT--------FTLCGTPEYLAPEVIQSKG---HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE----KILAGRLKFP 235 (329)
T ss_pred Cc--------ceecCChhhcCHHHHcCCC---CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHH----HHhcCCcCCC
Confidence 21 1237999999999986544 7889999999999999999999997665433221 1222333333
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTYS 681 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~~ 681 (683)
..++..+.+||.+||..||.+||+ +.+++.||||...
T Consensus 236 --~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 236 --NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred --CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 458899999999999999999996 7999999999763
No 24
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3e-43 Score=367.44 Aligned_cols=259 Identities=27% Similarity=0.406 Sum_probs=210.0
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
|.+.+.||+|+||.||+|.+..++..||||.+..... ........+.+|+.++..++||||++++++|. +.+.+|
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-~~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI----KKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-TKDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhh----hhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-cCCeEE
Confidence 7889999999999999999999999999998754321 11122345778999999999999999999986 667899
Q ss_pred EEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 485 TVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|||||++|+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.....
T Consensus 77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 99999999999988743 346899999999999999999999965 99999999999999999999999999987543
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
.. ......||+.|+|||++.... ++.++|||||||++|+|++|+.||.................. ....
T Consensus 155 ~~------~~~~~~g~~~y~aPE~~~~~~---~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~ 223 (285)
T cd05631 155 GE------TVRGRVGTVGYMAPEVINNEK---YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEE 223 (285)
T ss_pred CC------eecCCCCCCCccCHhhhcCCC---CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--cccc
Confidence 21 122347999999999986443 889999999999999999999999765442221111111111 1222
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTYS 681 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~~ 681 (683)
....++.++.+||.+||..||.+||+ +.++++||||...
T Consensus 224 ~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 224 YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 33468999999999999999999997 8999999999864
No 25
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-43 Score=375.98 Aligned_cols=267 Identities=30% Similarity=0.450 Sum_probs=228.7
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
--+.|++++.||.|.-|+||++....++.++|+|++....... ..-+.++..|-.||+.++||.++.||..|+ ..
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~----rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-t~ 149 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS----RKKLKRAQTEREILSLLDHPFLPTLYASFE-TD 149 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh----hhHHHHHHHHHHHHHhcCCCccchhhheee-cc
Confidence 3457888999999999999999999999999999986543322 334677888999999999999999999997 67
Q ss_pred ceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
+..|+|||||+||+|+.++++. +.+++..++.++.+|+.||.|||..| ||+|||||+||||.++|++.|+||.|+.
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvredGHIMLsDFDLS~ 227 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVREDGHIMLSDFDLSL 227 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecCCcEEeeeccccc
Confidence 8999999999999999999644 67999999999999999999999976 9999999999999999999999999985
Q ss_pred ccccCc-------------------------------C-CC-------------------cccccccCCCCCccCCcccc
Q 005678 559 IVEDDV-------------------------------G-SQ-------------------GMELTSQGAGTYWYLPPECF 587 (683)
Q Consensus 559 ~~~~~~-------------------------------~-~~-------------------~~~l~~~~~GT~~Y~APE~~ 587 (683)
...... . .. .-......+||-.|+|||++
T Consensus 228 ~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI 307 (459)
T KOG0610|consen 228 RCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVI 307 (459)
T ss_pred cCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceee
Confidence 432100 0 00 00112234799999999999
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCC
Q 005678 588 ELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERP 667 (683)
Q Consensus 588 ~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRP 667 (683)
.+.+ .+..||+|+|||++||||+|..||.+....+.+.. +....+.||..+.++..+++||+++|.+||.+|.
T Consensus 308 ~G~G---HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~N----Iv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRl 380 (459)
T KOG0610|consen 308 RGEG---HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRN----IVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRL 380 (459)
T ss_pred ecCC---CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHH----HhcCCCcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence 8766 78999999999999999999999999888777654 4567789999999999999999999999999999
Q ss_pred C----HHHHhcCcccCCC
Q 005678 668 D----VLTLAQDPYLTYS 681 (683)
Q Consensus 668 S----~~eLl~hP~l~~~ 681 (683)
. +.+|-+||||...
T Consensus 381 g~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 381 GSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred ccccchHHhhcCccccCC
Confidence 8 9999999999854
No 26
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.7e-43 Score=382.99 Aligned_cols=265 Identities=27% Similarity=0.409 Sum_probs=215.2
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+++.||+|+||+||+|.+..++..||||++..... ........+.+|+.++..++|||||+++++|. +.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~----~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV----LNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-DKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh----hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-cCCEE
Confidence 58899999999999999999999999999999854321 12234567899999999999999999999996 67889
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
|+|||||+||+|.+++.....+++..++.++.||+.||.|||..+ |+||||||+|||++.+|.+||+|||++..+...
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 999999999999999988888999999999999999999999865 999999999999999999999999998643211
Q ss_pred cCCC------------------------------------------cccccccCCCCCccCCcccccccCCCCCCchhHH
Q 005678 564 VGSQ------------------------------------------GMELTSQGAGTYWYLPPECFELSKTPLISSKVDV 601 (683)
Q Consensus 564 ~~~~------------------------------------------~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDV 601 (683)
.... ........+||+.|+|||++.... ++.++||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~Di 231 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG---YTQLCDW 231 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC---CCCccce
Confidence 0000 000112347999999999986443 7899999
Q ss_pred HHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhc--ccCCCCCCCHHHHhcCcccC
Q 005678 602 WSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCL--TYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 602 WSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL--~~dP~kRPS~~eLl~hP~l~ 679 (683)
|||||++|+|++|..||......+.... .+.....+.+|....+++++.+||.+|| ..+|..||++.+++.||||+
T Consensus 232 wSlG~il~elltG~~Pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~ 309 (381)
T cd05626 232 WSVGVILFEMLVGQPPFLAPTPTETQLK--VINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFS 309 (381)
T ss_pred eehhhHHHHHHhCCCCCcCCCHHHHHHH--HHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccC
Confidence 9999999999999999987665443321 1222334556665678999999999955 45566699999999999997
Q ss_pred C
Q 005678 680 Y 680 (683)
Q Consensus 680 ~ 680 (683)
.
T Consensus 310 ~ 310 (381)
T cd05626 310 E 310 (381)
T ss_pred C
Confidence 5
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.6e-44 Score=388.29 Aligned_cols=255 Identities=27% Similarity=0.467 Sum_probs=219.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||+|+||.||+|+.+.+...||||.+.+..... ..++.+.+|++|++.++|||||.+++.|+ ...+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~-----k~l~~l~~ev~i~r~lkHpniv~m~esfE-t~~~ 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNE-----KELKNLRQEVRILRSLKHPNIVEMLESFE-TSAH 75 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCch-----HHHHHHHHHHHHHHhcCCcchhhHHHhhc-ccce
Confidence 46888899999999999999999999999999886544322 23678999999999999999999999998 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+++|+|||.| +|..+|...+.+++..++.|+.+++.||.|||+.+ |+|||+||.|||++.+|.+|+||||+++.+..
T Consensus 76 ~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 76 LWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred EEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC--cccccCCcceeeecCCCceeechhhhhhhccc
Confidence 9999999966 99999999999999999999999999999999955 99999999999999999999999999998754
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
. . .+.....|||.|||||.+.... |+..+|+||||||+|||+.|++||....- ...-..+....+.+|
T Consensus 153 ~----t-~vltsikGtPlYmAPElv~e~p---yd~~sDlWslGcilYE~~~G~PPF~a~si----~~Lv~~I~~d~v~~p 220 (808)
T KOG0597|consen 153 N----T-SVLTSIKGTPLYMAPELVEEQP---YDHTSDLWSLGCILYELYVGQPPFYARSI----TQLVKSILKDPVKPP 220 (808)
T ss_pred C----c-eeeeeccCcccccCHHHHcCCC---ccchhhHHHHHHHHHHHhcCCCCchHHHH----HHHHHHHhcCCCCCc
Confidence 2 2 2234458999999999987444 99999999999999999999999965432 222233444445555
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
+..+..+..|+..+|.+||..|.+..+++.|||+..
T Consensus 221 --~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 221 --STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred --ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 378999999999999999999999999999999864
No 28
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.3e-43 Score=375.73 Aligned_cols=252 Identities=29% Similarity=0.451 Sum_probs=209.6
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEe
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
+.||+|+||.||+|.+..+|+.||||++..... ........+.+|+.++..++||||++++++|. +.+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI----IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ-THDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh----hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-cCCEEEEEEe
Confidence 369999999999999999999999999854321 11233567789999999999999999999886 6778999999
Q ss_pred cccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCc
Q 005678 489 YCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 489 y~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
|+++++|..++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---- 149 (323)
T cd05571 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---- 149 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC----
Confidence 9999999999988888999999999999999999999965 9999999999999999999999999987532211
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVS 648 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s 648 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......... . .+....+.+| ..++
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-~---~~~~~~~~~p--~~~~ 219 (323)
T cd05571 150 -ATMKTFCGTPEYLAPEVLEDND---YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-E---LILMEEIRFP--RTLS 219 (323)
T ss_pred -CcccceecCccccChhhhcCCC---CCccccCcccchhhhhhhcCCCCCCCCCHHHHH-H---HHHcCCCCCC--CCCC
Confidence 1122347999999999986443 789999999999999999999999765443222 1 1222333443 4689
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 649 NEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
.++.+||.+||..||.+|| ++.++++||||...
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 220 PEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred HHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999999999999999999 89999999999753
No 29
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.6e-43 Score=375.17 Aligned_cols=258 Identities=28% Similarity=0.417 Sum_probs=215.7
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+++.||+|+||.||+|.+..++..||||++..... ........+..|+.++..++||||++++++|. +.+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL----FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-DDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH----hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-cCCE
Confidence 368999999999999999999999999999999854321 12233567889999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||++|++|.+++...+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 9999999999999999988888999999999999999999999965 99999999999999999999999999976543
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
......||+.|+|||++... .++.++|||||||++|+|++|..||......+...... .....+..|
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~~~~ 220 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGK---GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK--YWKETLQRP 220 (333)
T ss_pred --------ccCCcccCccccChhHhcCC---CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHH--hccccccCC
Confidence 12334799999999998654 38899999999999999999999998766544332211 111112222
Q ss_pred CC----cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 643 SR----PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 643 ~~----~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.. ..++.++.+||.+||..+|.+||++.++++||||..
T Consensus 221 ~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 221 VYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred CCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 22 257899999999999999999999999999999975
No 30
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.9e-44 Score=392.85 Aligned_cols=256 Identities=31% Similarity=0.465 Sum_probs=219.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
-|.+++.||+|+.|.|-+|.+..||+.+|||++......+ ......+-+|+.||+-+.|||+++||++|+ +...+
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s----~s~~~~IerEIviMkLi~HpnVl~LydVwe-~~~~l 87 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELS----SSQPAGIEREIVIMKLIEHPNVLRLYDVWE-NKQHL 87 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccc----cccccchhhhhHHHHHhcCCCeeeeeeeec-cCceE
Confidence 4889999999999999999999999999999986543222 223456788999999999999999999997 78899
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
|+|+||++||.|.+++-..+++++.++..++.||+.|+.|+|... |+||||||.|+|||..+++||+|||+|..-..+
T Consensus 88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 999999999999999999999999999999999999999999865 999999999999999889999999999765433
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
.+..+.+|+|.|.+||++.+.++ -..++||||+|||||.||+|+.||++..-.. ++. -++.+.+..|
T Consensus 166 ------klLeTSCGSPHYA~PEIV~G~pY--dG~~sDVWSCGVILfALLtG~LPFdDdNir~-LLl---KV~~G~f~MP- 232 (786)
T KOG0588|consen 166 ------KLLETSCGSPHYAAPEIVSGRPY--DGRPSDVWSCGVILFALLTGKLPFDDDNIRV-LLL---KVQRGVFEMP- 232 (786)
T ss_pred ------ccccccCCCcccCCchhhcCCCC--CCCccccchhHHHHHHHHhCCCCCCCccHHH-HHH---HHHcCcccCC-
Confidence 23445599999999999986553 4678999999999999999999998554433 322 1334445555
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..+|.++++||++||..||.+|++..+|++|||++.
T Consensus 233 -s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 233 -SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred -CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 689999999999999999999999999999999974
No 31
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.9e-43 Score=370.45 Aligned_cols=267 Identities=25% Similarity=0.385 Sum_probs=208.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC---
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ--- 480 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~--- 480 (683)
+|.+.+.||+|+||.||+|.+..++..||||.+...... ......+.+|+.+++.++||||+++++++....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-----VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE 75 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-----chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCC
Confidence 589999999999999999999999999999987532211 112346789999999999999999999874322
Q ss_pred -ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 481 -NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 481 -~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
..+|+||||| +++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++.
T Consensus 76 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 76 FKDIYVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred CceEEEEEecC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEccCccccc
Confidence 3589999999 5699999988878999999999999999999999965 99999999999999999999999999986
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH--------
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRED-------- 631 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~-------- 631 (683)
........ .......||+.|+|||++.... ..++.++|||||||++|+|++|++||.............
T Consensus 153 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~-~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 153 AFNDTPTA--IFWTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP 229 (338)
T ss_pred cccccCcc--ccccCCCCCCCcCCHHHHhccc-cccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 54322111 1223457999999999875421 247889999999999999999999997654332111000
Q ss_pred ------------HHHH----hhccCC-CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 632 ------------TIIK----ARKVEF-PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 632 ------------~i~~----~~~~~~-p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.... .....+ ...+.+++.+.+||.+||..+|.+||++.++++||||+..
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~ 296 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL 296 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence 0000 000000 0124578889999999999999999999999999999764
No 32
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.6e-42 Score=370.49 Aligned_cols=262 Identities=25% Similarity=0.422 Sum_probs=213.8
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
+..++|.+++.||+|+||.||++.+..++..||+|++..... ......+.+|+.+++.++||||++++++|. +
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~ 74 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNSPYIVGFYGAFY-S 74 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-E
Confidence 345789999999999999999999999999999999865321 123457889999999999999999999986 6
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
.+.+++||||+++++|.+++.....+++..+..++.|++.||.|||+. .+|+|+||||+|||++.++.+||+|||++..
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 153 (331)
T cd06649 75 DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK-HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (331)
T ss_pred CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc-CCEEcCCCChhhEEEcCCCcEEEccCccccc
Confidence 678999999999999999998877899999999999999999999974 2599999999999999999999999999976
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH--------
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRED-------- 631 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~-------- 631 (683)
..... .....||+.|+|||++.... ++.++|||||||++|+|++|+.||......+......
T Consensus 154 ~~~~~-------~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (331)
T cd06649 154 LIDSM-------ANSFVGTRSYMSPERLQGTH---YSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEE 223 (331)
T ss_pred ccccc-------cccCCCCcCcCCHhHhcCCC---CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccccccc
Confidence 54321 22347999999999986443 8899999999999999999999997554332110000
Q ss_pred -----------------------------------HHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 005678 632 -----------------------------------TIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDP 676 (683)
Q Consensus 632 -----------------------------------~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP 676 (683)
.+........+ ...++.++.+||.+||.+||++|||+.+|++||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 224 GEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP-NGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred CCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCC-CccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 00000000111 124788999999999999999999999999999
Q ss_pred ccCC
Q 005678 677 YLTY 680 (683)
Q Consensus 677 ~l~~ 680 (683)
||+.
T Consensus 303 ~~~~ 306 (331)
T cd06649 303 FIKR 306 (331)
T ss_pred HHhh
Confidence 9974
No 33
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.6e-43 Score=381.85 Aligned_cols=264 Identities=27% Similarity=0.410 Sum_probs=215.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+++.||+|+||+||+|.+..++..||||++... ..........+.+|+.+++.++|||||+++++|. +.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~----~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKK----DVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-DKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHH----HhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-eCCEE
Confidence 588999999999999999999999999999987532 1122344667889999999999999999999996 67889
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
|+|||||++|+|..++...+.+++..++.++.||+.||.|||+.+ ||||||||+|||++.+|.+||+|||++..+...
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 999999999999999988778999999999999999999999965 999999999999999999999999998543210
Q ss_pred cCCC------------------------------------------cccccccCCCCCccCCcccccccCCCCCCchhHH
Q 005678 564 VGSQ------------------------------------------GMELTSQGAGTYWYLPPECFELSKTPLISSKVDV 601 (683)
Q Consensus 564 ~~~~------------------------------------------~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDV 601 (683)
.... ........+||+.|+|||++.... ++.++||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~Di 231 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG---YTQLCDW 231 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC---CCCeeeE
Confidence 0000 000112347999999999986444 8899999
Q ss_pred HHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCccc
Q 005678 602 WSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPD---VLTLAQDPYL 678 (683)
Q Consensus 602 WSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS---~~eLl~hP~l 678 (683)
|||||++|+|++|.+||......+.... .+.......+|....+++++.+||.+|+ .+|.+|++ +.++++||||
T Consensus 232 wSlGvil~elltG~~Pf~~~~~~~~~~~--i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f 308 (382)
T cd05625 232 WSVGVILYEMLVGQPPFLAQTPLETQMK--VINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFF 308 (382)
T ss_pred EechHHHHHHHhCCCCCCCCCHHHHHHH--HHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCc
Confidence 9999999999999999987665443322 1122234455666678999999999986 59999997 9999999999
Q ss_pred CC
Q 005678 679 TY 680 (683)
Q Consensus 679 ~~ 680 (683)
..
T Consensus 309 ~~ 310 (382)
T cd05625 309 KT 310 (382)
T ss_pred CC
Confidence 75
No 34
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-43 Score=383.05 Aligned_cols=266 Identities=26% Similarity=0.445 Sum_probs=220.0
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID- 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d- 479 (683)
-.+.|..++.||+|.||.||+|++..+|+.||+|.+..... +........|||.||++|+||||++|.+.....
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-----~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~ 189 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-----KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL 189 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-----CCcchHHHHHHHHHHHhcCCCcccceeeEEEecC
Confidence 45678889999999999999999999999999998866543 233467889999999999999999999987644
Q ss_pred CceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
.+.+|+|+|||+. ||..++... -.|++.++..|+.||+.||.|+|..+ |+|||||.+|||||.+|.+||+|||||+
T Consensus 190 ~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn~G~LKiaDFGLAr 266 (560)
T KOG0600|consen 190 SGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDNNGVLKIADFGLAR 266 (560)
T ss_pred CceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcCCCCEEecccccee
Confidence 5799999999954 999988654 36999999999999999999999976 9999999999999999999999999999
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh-
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR- 637 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~- 637 (683)
++...... .....+.|.||.|||.+.+.. .|+..+|+||+||||.||+.|++.|......+.+...-.+-...
T Consensus 267 ~y~~~~~~----~~T~rVvTLWYRpPELLLG~t--~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~ 340 (560)
T KOG0600|consen 267 FYTPSGSA----PYTSRVVTLWYRPPELLLGAT--SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPT 340 (560)
T ss_pred eccCCCCc----ccccceEEeeccChHHhcCCc--ccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCC
Confidence 87654322 133458899999999987543 59999999999999999999999998888777664322221110
Q ss_pred -----ccCCCC-----------------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 638 -----KVEFPS-----------------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 638 -----~~~~p~-----------------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
...+|. ...++..+.+|+..+|++||.+|.|+.++|+|+||+.
T Consensus 341 e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 341 EDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred hhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 011111 0346788999999999999999999999999999953
No 35
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.8e-43 Score=375.98 Aligned_cols=265 Identities=31% Similarity=0.481 Sum_probs=219.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+++.||+|+||+||+|.+..++..||||++..... ........+..|+.++..+.||||++++++|. +.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM----IKRNQIAHVRAERDILADADSPWIVKLYYSFQ-DEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHH----hhccHHHHHHHHHHHHHhcCCCCccchhhhee-cCCe
Confidence 469999999999999999999999999999999854321 11233567888999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|.+++...+.+++..++.++.||+.||.|||..+ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999999999987788999999999999999999999955 99999999999999999999999999987654
Q ss_pred CcCC------------------------CcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 005678 563 DVGS------------------------QGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPF 618 (683)
Q Consensus 563 ~~~~------------------------~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF 618 (683)
.... ..........||+.|+|||++... .++.++|||||||++|+|++|+.||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~Pf 230 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT---PYGLECDWWSLGVILYEMLYGFPPF 230 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC---CCCCceeeEecchhhhhhccCCCCC
Confidence 3200 000112344799999999998755 3899999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCC-HHHHhcCcccCC
Q 005678 619 GHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPD-VLTLAQDPYLTY 680 (683)
Q Consensus 619 ~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS-~~eLl~hP~l~~ 680 (683)
........... .........+|....+++++.+||.+||. +|.+||+ +.++++||||..
T Consensus 231 ~~~~~~~~~~~--i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 231 YSDTLQETYNK--IINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred CCCCHHHHHHH--HhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 87765443221 11112344566666689999999999997 9999999 999999999975
No 36
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2e-43 Score=356.11 Aligned_cols=263 Identities=30% Similarity=0.496 Sum_probs=217.7
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
.+|...+.||+|.||.||+|+|..+|+.||||.+..... +...-..++||+..|+.++||||+.|+|+|. ....
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-----kdGi~~talREIK~Lqel~h~nIi~LiD~F~-~~~~ 75 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-----KDGINRTALREIKLLQELKHPNIIELIDVFP-HKSN 75 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-----ccCccHHHHHHHHHHHHccCcchhhhhhhcc-CCCc
Confidence 478889999999999999999999999999999876532 2223457899999999999999999999997 6778
Q ss_pred EEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+.||+|||+ .+|..+++. .-.++...+..++.++++||+|||... |+||||||.|+|++++|.+||+|||+++.+.
T Consensus 76 l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~g~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 76 LSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSDGQLKIADFGLARFFG 152 (318)
T ss_pred eEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCCCcEEeecccchhccC
Confidence 999999995 699999964 457999999999999999999999855 9999999999999999999999999999886
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH-HhhccC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII-KARKVE 640 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~-~~~~~~ 640 (683)
..... ....+-|.||.|||.+.+.+ .|+..+||||.|||+.||+.|.+-|.+..+.+.+-..-... ....-.
T Consensus 153 ~p~~~-----~~~~V~TRWYRAPELLfGsr--~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~ 225 (318)
T KOG0659|consen 153 SPNRI-----QTHQVVTRWYRAPELLFGSR--QYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQ 225 (318)
T ss_pred CCCcc-----cccceeeeeccChHHhccch--hcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCccc
Confidence 54322 12227899999999987655 38999999999999999999998888877776653321111 111111
Q ss_pred CCC---------------C------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 641 FPS---------------R------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 641 ~p~---------------~------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
||. + +.+++++.+|+.+||.+||.+|+++.++++||||+.+
T Consensus 226 WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 226 WPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL 287 (318)
T ss_pred CccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence 221 1 4567888999999999999999999999999999853
No 37
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.3e-42 Score=363.07 Aligned_cols=259 Identities=30% Similarity=0.490 Sum_probs=207.2
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||||++....... ....+.+|+.+++.++||||+++++++. +.+.
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~ 77 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------APCTAIREVSLLKNLKHANIVTLHDIIH-TERC 77 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC------cchhHHHHHHHHHhCCCCCEeeEEEEEc-CCCe
Confidence 46999999999999999999999999999999885432111 1235678999999999999999999986 5678
Q ss_pred EEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+++||||+++ +|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 78 ~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~ 154 (288)
T cd07871 78 LTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINEKGELKLADFGLARAKS 154 (288)
T ss_pred EEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence 9999999975 898888644 45789999999999999999999865 9999999999999999999999999997654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh-----
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA----- 636 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~----- 636 (683)
.... ......||+.|+|||++... ..++.++|||||||++|+|++|++||......+.+.........
T Consensus 155 ~~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07871 155 VPTK-----TYSNEVVTLWYRPPDVLLGS--TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEET 227 (288)
T ss_pred CCCc-----cccCceecccccChHHhcCC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHH
Confidence 3211 12234789999999987532 33789999999999999999999999876654433221111000
Q ss_pred ----------hccCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 637 ----------RKVEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 637 ----------~~~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
....+|. .+.++.++.+||.+||.+||.+|||+.++++||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 228 WPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0011111 24578899999999999999999999999999998
No 38
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.2e-43 Score=380.75 Aligned_cols=265 Identities=26% Similarity=0.395 Sum_probs=214.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+++.||+|+||+||+|.+..++..||||++.... .........+.+|+.++..++|||||+++++|. +.+.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE----MFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ-DAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH----HHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCe
Confidence 36899999999999999999999999999999874321 112234567889999999999999999999996 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||++|++|..++...+.+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9999999999999999988888999999999999999999999966 99999999999999999999999999964321
Q ss_pred CcCCC-------------c------c-----------------------cccccCCCCCccCCcccccccCCCCCCchhH
Q 005678 563 DVGSQ-------------G------M-----------------------ELTSQGAGTYWYLPPECFELSKTPLISSKVD 600 (683)
Q Consensus 563 ~~~~~-------------~------~-----------------------~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksD 600 (683)
..... . . ......+||+.|+|||++.... ++.++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~D 230 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG---YGQECD 230 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCC---CCCcee
Confidence 10000 0 0 0001246999999999986443 889999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCcc
Q 005678 601 VWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAER---PDVLTLAQDPY 677 (683)
Q Consensus 601 VWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kR---PS~~eLl~hP~ 677 (683)
||||||++|+|++|..||......+.+.. .......+.+|....++.++.+||.+||. +|.+| +++.+++.|||
T Consensus 231 iwSlGvil~elltG~~Pf~~~~~~~~~~~--i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~ 307 (377)
T cd05629 231 WWSLGAIMFECLIGWPPFCSENSHETYRK--IINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF 307 (377)
T ss_pred eEecchhhhhhhcCCCCCCCCCHHHHHHH--HHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence 99999999999999999987665443221 11122345566666789999999999998 66665 59999999999
Q ss_pred cCC
Q 005678 678 LTY 680 (683)
Q Consensus 678 l~~ 680 (683)
|+.
T Consensus 308 ~~~ 310 (377)
T cd05629 308 FRG 310 (377)
T ss_pred cCC
Confidence 974
No 39
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.3e-43 Score=380.96 Aligned_cols=264 Identities=27% Similarity=0.399 Sum_probs=215.0
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+++.||+|+||.||+|.+..++..||||++.... .........+.+|+.++..++||||+++++.|. +.+.+
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~----~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~~~ 76 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD----VLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ-DKDNL 76 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH----HHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCEE
Confidence 6899999999999999999999999999999874321 112233567889999999999999999999996 67899
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
|+|||||++|+|.+++...+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+|..+...
T Consensus 77 ~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 77 YFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 999999999999999988888999999999999999999999965 999999999999999999999999998533210
Q ss_pred cCCC--------------------------------------cccccccCCCCCccCCcccccccCCCCCCchhHHHHHH
Q 005678 564 VGSQ--------------------------------------GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAG 605 (683)
Q Consensus 564 ~~~~--------------------------------------~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLG 605 (683)
.... ........+||+.|+|||++.... ++.++||||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG 231 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG---YTQLCDWWSVG 231 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC---CCcceeeeecc
Confidence 0000 000112347999999999986444 78999999999
Q ss_pred HHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccCC
Q 005678 606 ILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERP---DVLTLAQDPYLTY 680 (683)
Q Consensus 606 vILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRP---S~~eLl~hP~l~~ 680 (683)
|++|+|++|..||......+.... .........++....++.++.+||.+|+ .+|.+|+ ++.++++||||..
T Consensus 232 vilyell~G~~Pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 232 VILYEMLVGQPPFLADTPAETQLK--VINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred ceeeehhhCCCCCCCCCHHHHHHH--HhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 999999999999987765443322 1112223445555678999999999987 4999999 9999999999975
No 40
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.9e-42 Score=364.02 Aligned_cols=263 Identities=28% Similarity=0.435 Sum_probs=206.0
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.++|.+.+.||.|+||.||+|.+..++..||||++...... .....+.+|+.+++.++||||+++++++. +..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~ 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE------GTPFTAIREASLLKGLKHANIVLLHDIIH-TKE 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc------ccchhHHHHHHHHhhCCCCCcCeEEEEEe-cCC
Confidence 36799999999999999999999999999999998543211 11235678999999999999999999986 677
Q ss_pred eEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+|+||||++ ++|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++...
T Consensus 77 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 77 TLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISDTGELKLADFGLARAK 153 (303)
T ss_pred eEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECCCCcceec
Confidence 8999999995 577777754 456899999999999999999999965 999999999999999999999999998754
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh--c
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR--K 638 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~--~ 638 (683)
..... ......||+.|+|||++... ..++.++|||||||++|+|++|..||.........+......... .
T Consensus 154 ~~~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 226 (303)
T cd07869 154 SVPSH-----TYSNEVVTLWYRPPDVLLGS--TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNE 226 (303)
T ss_pred cCCCc-----cCCCCcccCCCCChHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCCh
Confidence 32211 12234789999999987532 237889999999999999999999997654433222211100000 0
Q ss_pred cCCC-------------------------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 639 VEFP-------------------------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 639 ~~~p-------------------------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
..++ ....+++.+.+||.+||.+||.+|||+.++++||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 227 DTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred hhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 0000 001245789999999999999999999999999999864
No 41
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=9.7e-43 Score=368.86 Aligned_cols=250 Identities=28% Similarity=0.400 Sum_probs=207.9
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecc
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYC 490 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~ 490 (683)
||+|+||.||+|.+..++..||||++..... ........+.+|+.++..++||||++++++|. +.+.+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI----VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-SPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh----hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-cCCeEEEEEcCC
Confidence 7999999999999999999999998753211 12233567889999999999999999999886 678899999999
Q ss_pred cCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCccc
Q 005678 491 SGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGME 570 (683)
Q Consensus 491 ~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~ 570 (683)
++++|..++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++...... .
T Consensus 76 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-----~ 148 (312)
T cd05585 76 NGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-----D 148 (312)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-----C
Confidence 99999999988878999999999999999999999965 9999999999999999999999999997543221 1
Q ss_pred ccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHH
Q 005678 571 LTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNE 650 (683)
Q Consensus 571 l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~e 650 (683)
......||+.|+|||++.... ++.++|||||||++|+|++|..||......... . . .....+.+| ..++..
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~-~--~-~~~~~~~~~--~~~~~~ 219 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHG---YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMY-R--K-ILQEPLRFP--DGFDRD 219 (312)
T ss_pred ccccccCCcccCCHHHHcCCC---CCCccceechhHHHHHHHhCCCCcCCCCHHHHH-H--H-HHcCCCCCC--CcCCHH
Confidence 123347999999999986543 889999999999999999999999766544322 1 1 122233333 468999
Q ss_pred HHHHHHHhcccCCCCCC---CHHHHhcCcccCCC
Q 005678 651 AKDLIRRCLTYNQAERP---DVLTLAQDPYLTYS 681 (683)
Q Consensus 651 l~dLI~rCL~~dP~kRP---S~~eLl~hP~l~~~ 681 (683)
+.+||.+||..||.+|| ++.+++.||||...
T Consensus 220 ~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 220 AKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 99999999999999997 57999999999853
No 42
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=373.88 Aligned_cols=260 Identities=27% Similarity=0.404 Sum_probs=215.8
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCC-eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEH-RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g-~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
..+..+.|.+.+.||+|+||.||+|.+..++ ..||+|.+..... ........+.+|+.++..++|||||+++++|
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~ 100 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI----IKQKQVDHVFSERKILNYINHPFCVNLYGSF 100 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh----hhhhhHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence 3445678999999999999999999876554 7899998754321 1223356788999999999999999999998
Q ss_pred ccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
. +.+.+|+||||+++|+|..++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+
T Consensus 101 ~-~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~ikL~DFG~ 177 (340)
T PTZ00426 101 K-DESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDKDGFIKMTDFGF 177 (340)
T ss_pred E-eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEecCCC
Confidence 6 67789999999999999999988888999999999999999999999965 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
+..+... .....||+.|+|||++.... ++.++|||||||++|+|++|..||.......... . +..
T Consensus 178 a~~~~~~--------~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~---~-i~~ 242 (340)
T PTZ00426 178 AKVVDTR--------TYTLCGTPEYIAPEILLNVG---HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQ---K-ILE 242 (340)
T ss_pred CeecCCC--------cceecCChhhcCHHHHhCCC---CCccccccchhhHHHHHhcCCCCCCCCCHHHHHH---H-Hhc
Confidence 9866432 12347999999999986443 7889999999999999999999998665432221 1 122
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
....+| +.+++.+.+||.+||..+|.+|+ ++.++++||||...
T Consensus 243 ~~~~~p--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 243 GIIYFP--KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred CCCCCC--CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 223333 56899999999999999999995 89999999999753
No 43
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-43 Score=388.31 Aligned_cols=260 Identities=30% Similarity=0.458 Sum_probs=220.1
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeecccccc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEI 478 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~ 478 (683)
+--+.|.++.+||+|+||+|+++..+.++.+||||++++......+. +.....|-.|+.... ||.++.||.+|+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~----Ve~~~~EkrI~~la~~HPFL~~L~~~fQ- 439 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDE----VESLMCEKRIFELANRHPFLVNLFSCFQ- 439 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceecccc----HHHHHHHHHHHHHhccCCeEeecccccc-
Confidence 44578999999999999999999999999999999998876554432 556777888888775 999999999997
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
...++|+||||+.||++.. +.....+++..++.|+..|+.||.|||+.+ |||||||.+|||||..|++||+|||||+
T Consensus 440 T~~~l~fvmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 440 TKEHLFFVMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred cCCeEEEEEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEcccCcEEeccccccc
Confidence 6789999999999999444 444457999999999999999999999965 9999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
-.... -..+++.+|||.|||||++.... |+..+|+|||||+|||||.|..||..++..+.+-. +....
T Consensus 517 e~m~~-----g~~TsTfCGTpey~aPEil~e~~---Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fds----I~~d~ 584 (694)
T KOG0694|consen 517 EGMGQ-----GDRTSTFCGTPEFLAPEVLTEQS---YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDS----IVNDE 584 (694)
T ss_pred ccCCC-----CCccccccCChhhcChhhhccCc---ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HhcCC
Confidence 54321 13477889999999999997665 99999999999999999999999988776654421 23344
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTYS 681 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~~ 681 (683)
+.+| ..+|.++.++++++|..+|.+|.- +.+|..||||+..
T Consensus 585 ~~yP--~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 585 VRYP--RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred CCCC--CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 4555 359999999999999999999984 6889999999864
No 44
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-43 Score=366.75 Aligned_cols=267 Identities=27% Similarity=0.409 Sum_probs=220.0
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc-
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI- 478 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~- 478 (683)
.+..+|..++.||+|+||.|+.+.+..+|..||||.+... .......++..||+.+|+.++|+||+.+++++..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-----F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~ 93 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-----FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPP 93 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-----hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccc
Confidence 4566787789999999999999999999999999976422 1223345788999999999999999999999865
Q ss_pred ---CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 479 ---DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 479 ---d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
.-+.+|+|+|+| +.+|..+++....|++..+..+++|++.||+|+|+.+ |+||||||+|+|++.++.+||||||
T Consensus 94 ~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 94 SRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred cccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccCCCEEecccc
Confidence 245689999999 7799999999988999999999999999999999965 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH----
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRED---- 631 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~---- 631 (683)
+|+..... ......+..+.|.||.|||.+... ..|+..+||||+||||.|||+|++.|.+......+...-
T Consensus 171 LAR~~~~~---~~~~~mTeYVaTRWYRAPElll~~--~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 171 LARYLDKF---FEDGFMTEYVATRWYRAPELLLNS--SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG 245 (359)
T ss_pred ceeecccc---CcccchhcceeeeeecCHHHHhcc--ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC
Confidence 99988654 112334566899999999988543 359999999999999999999999997766655542110
Q ss_pred ----------------HHHHhhccCCCC------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 632 ----------------TIIKARKVEFPS------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 632 ----------------~i~~~~~~~~p~------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..+.... ..|. -|..++.+.+|+.+||..||.+|+|++++|.||||..
T Consensus 246 tP~~e~l~~i~s~~ar~yi~slp-~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 246 TPSEEDLQKIRSEKARPYIKSLP-QIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred CCCHHHHHHhccHHHHHHHHhCC-CCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 0111111 1111 1577899999999999999999999999999999864
No 45
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.3e-42 Score=376.06 Aligned_cols=268 Identities=26% Similarity=0.404 Sum_probs=219.6
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
.+..+.|.+.+.||+|+||.||+|.+..++..||||++..... ........+..|+.+++.++||||++++++|.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~- 113 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM----IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ- 113 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh----hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe-
Confidence 4456789999999999999999999999999999999743211 11222345778999999999999999999886
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
+.+.+|+|||||+||+|..++... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~kL~DfG~~~ 190 (370)
T cd05596 114 DDKYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcCCCCEEEEecccee
Confidence 678899999999999999998765 4899999999999999999999965 9999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSK-TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~-~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
....... .......||+.|+|||++.... ...++.++|||||||++|+|++|..||........+.. .+....
T Consensus 191 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~--i~~~~~ 264 (370)
T cd05596 191 KMDANGM----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK--IMDHKN 264 (370)
T ss_pred eccCCCc----ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHH--HHcCCC
Confidence 6543211 1123457999999999986433 23478999999999999999999999987665432211 111223
Q ss_pred ccCCCCCcCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCC
Q 005678 638 KVEFPSRPAVSNEAKDLIRRCLTYNQAE--RPDVLTLAQDPYLTY 680 (683)
Q Consensus 638 ~~~~p~~~~~s~el~dLI~rCL~~dP~k--RPS~~eLl~hP~l~~ 680 (683)
.+.+|....+|.++.+||.+||..+|.+ ||++.++++||||+.
T Consensus 265 ~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 265 SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 4566766678999999999999999988 999999999999975
No 46
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.7e-42 Score=367.85 Aligned_cols=251 Identities=29% Similarity=0.452 Sum_probs=208.4
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEe
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
+.||+|+||.||++.+..+|..||+|++..... ........+.+|+.+++.++||||++++++|. ..+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh----hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe-cCCEEEEEEe
Confidence 369999999999999999999999999854321 11223557788999999999999999999986 6778999999
Q ss_pred cccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCc
Q 005678 489 YCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 489 y~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
|+++++|..++.....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--- 150 (323)
T cd05595 76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--- 150 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcCCCCEEecccHHhccccCCCC---
Confidence 9999999999988878999999999999999999999965 99999999999999999999999999875322211
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVS 648 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s 648 (683)
......||+.|+|||++.... ++.++|||||||++|+|++|..||........... .......+| ..++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~----~~~~~~~~p--~~~~ 219 (323)
T cd05595 151 --TMKTFCGTPEYLAPEVLEDND---YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFP--RTLS 219 (323)
T ss_pred --ccccccCCcCcCCcccccCCC---CCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HhcCCCCCC--CCCC
Confidence 122347999999999986443 78999999999999999999999976554332211 122233333 4689
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 005678 649 NEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTY 680 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~ 680 (683)
+++.+||.+||..||.+|| ++.++++||||..
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 220 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred HHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 9999999999999999998 8999999999975
No 47
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.2e-42 Score=368.33 Aligned_cols=252 Identities=29% Similarity=0.460 Sum_probs=208.9
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEe
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
+.||+|+||.||++.+..++..||||++...... .......+.+|+.+++.++||||++++++|. +.+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVII----AKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ-TKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-cCCEEEEEEe
Confidence 3689999999999999999999999998543221 1223567888999999999999999999886 6778999999
Q ss_pred cccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCc
Q 005678 489 YCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 489 y~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
|+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 76 y~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~---- 149 (328)
T cd05593 76 YVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA---- 149 (328)
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECCCCcEEEecCcCCccCCCcc----
Confidence 9999999999988888999999999999999999999965 9999999999999999999999999987543221
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVS 648 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s 648 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......... . .+....+.+| ..++
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~-~---~~~~~~~~~p--~~~~ 219 (328)
T cd05593 150 -ATMKTFCGTPEYLAPEVLEDND---YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-E---LILMEDIKFP--RTLS 219 (328)
T ss_pred -cccccccCCcCccChhhhcCCC---CCccCCccccchHHHHHhhCCCCCCCCCHHHHH-H---HhccCCccCC--CCCC
Confidence 1122347999999999986443 789999999999999999999999765543322 1 1222233333 5689
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 649 NEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
.++.+||.+||..||.+|| ++.++++||||...
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 220 ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999999999997 89999999999753
No 48
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-42 Score=369.48 Aligned_cols=264 Identities=25% Similarity=0.387 Sum_probs=218.2
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||+|+||+||+|.+..++..||||++..... ........+.+|+.++..+.||||++++++|. +.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~-~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL----LAQETVSFFEEERDILSISNSPWIPQLQYAFQ-DKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh----hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe-cCCe
Confidence 368999999999999999999999999999999854321 12234567788999999999999999999886 6778
Q ss_pred EEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||.|||++.+|.+||+|||++..+.
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 99999999999999999765 67999999999999999999999965 9999999999999999999999999998764
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSK---TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~---~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
.... .......||+.|+|||++.... ...++.++|||||||++|+|++|..||........+.. .+.....
T Consensus 154 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~--i~~~~~~ 227 (330)
T cd05601 154 ANKM----VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNN--IMNFQRF 227 (330)
T ss_pred CCCc----eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHH--HHcCCCc
Confidence 3211 1223347999999999986321 23478899999999999999999999977665443221 1111233
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..+|..+.++..+.+||.+||. +|.+||++.+++.||||..
T Consensus 228 ~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 228 LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 4567667899999999999998 9999999999999999975
No 49
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-42 Score=375.16 Aligned_cols=262 Identities=31% Similarity=0.479 Sum_probs=224.5
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFE 477 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~ 477 (683)
.-+...|.+.+.||.|.||.||+|..+.+|..||||++......... ....+.+|+.||+++. |||||.++++|+
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----~~~~v~~Ev~il~~l~~hpniv~l~~~~e 106 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----DREDVRREVAILQQLSGHPNIVQLKDAFE 106 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----cHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 34567899999999999999999999999999999998655432221 2457889999999998 999999999997
Q ss_pred cCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC----CCcEEEEe
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE----FGVAKVTD 553 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~----~g~vKL~D 553 (683)
+...+++|||+|.||.|.+.+... .+++..+..++.|++.|+.|||+.| |+||||||+|+|+.. ++.+|++|
T Consensus 107 -~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~~~~~~~~ik~~D 182 (382)
T KOG0032|consen 107 -DPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLASKDEGSGRIKLID 182 (382)
T ss_pred -cCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeeccccCCCCcEEEee
Confidence 677999999999999999999665 3999999999999999999999965 999999999999974 35799999
Q ss_pred cCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Q 005678 554 FGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI 633 (683)
Q Consensus 554 FGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i 633 (683)
||++...... ......+||+.|+|||++.... |+..+||||+||++|.|++|.+||...........
T Consensus 183 FGla~~~~~~------~~~~~~~Gtp~y~APEvl~~~~---y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~---- 249 (382)
T KOG0032|consen 183 FGLAKFIKPG------ERLHTIVGTPEYVAPEVLGGRP---YGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLA---- 249 (382)
T ss_pred CCCceEccCC------ceEeeecCCccccCchhhcCCC---CCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHH----
Confidence 9999987652 2344569999999999986544 89999999999999999999999988876665542
Q ss_pred HHhhc--cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 634 IKARK--VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 634 ~~~~~--~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+.... +..+.++.+|..+++||++||..||..|+++.++|+|||++..
T Consensus 250 i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 250 ILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred HHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 22333 3445677899999999999999999999999999999999864
No 50
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.7e-42 Score=372.88 Aligned_cols=265 Identities=25% Similarity=0.424 Sum_probs=215.7
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+++.||+|+||.||+|.+..++..||||++.... .........+..|+.++..++||||+++++.|. +.+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKAD----MLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ-DKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH----HhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCE
Confidence 36889999999999999999999999999999985321 112234567888999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+|||||+|++|..++...+.+++..++.++.|++.||.|||+.+ ||||||||+|||++.+|.+||+|||++..+..
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 9999999999999999988888999999999999999999999965 99999999999999999999999999875532
Q ss_pred CcCCC------------------------------cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH
Q 005678 563 DVGSQ------------------------------GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML 612 (683)
Q Consensus 563 ~~~~~------------------------------~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL 612 (683)
..... ........+||+.|+|||++.... ++.++|||||||++|+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~---~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG---YNKLCDWWSLGVIMYEML 230 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCC---CCCcceeccccceeeecc
Confidence 11000 000112347999999999986444 889999999999999999
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccCC
Q 005678 613 FGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERP---DVLTLAQDPYLTY 680 (683)
Q Consensus 613 tG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRP---S~~eLl~hP~l~~ 680 (683)
+|..||........... .......+.+|....++.++++||.+|+. +|.+|+ ++.+++.||||..
T Consensus 231 tG~~Pf~~~~~~~~~~~--i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 231 IGYPPFCSETPQETYRK--VMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred cCCCCCCCCCHHHHHHH--HHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence 99999987665443321 11112334556555689999999999874 999998 4899999999975
No 51
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8.4e-42 Score=355.36 Aligned_cols=259 Identities=28% Similarity=0.504 Sum_probs=201.4
Q ss_pred cceeEEEEecccCceEEEEEEEcc-CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc---CCCceeeecccccc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLV-EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL---VHHHIVRLWDTFEI 478 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~-~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L---~HpnIV~L~~~f~~ 478 (683)
.+|.+++.||+|+||.||+|.+.. ++..||||++......... ...+.+|+.+++.+ .||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~ 75 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM-----PLSTIREVAVLRHLETFEHPNVVRLFDVCTV 75 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc-----hHHHHHHHHHHHhhcccCCCCcceEEEEEec
Confidence 379999999999999999998854 5789999987654322111 22445666666655 69999999998742
Q ss_pred ----CCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEE
Q 005678 479 ----DQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVT 552 (683)
Q Consensus 479 ----d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~ 552 (683)
....+++||||++ ++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+
T Consensus 76 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 76 SRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred ccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcCCCCEEEc
Confidence 3456899999995 6899888543 45899999999999999999999965 9999999999999999999999
Q ss_pred ecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Q 005678 553 DFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT 632 (683)
Q Consensus 553 DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~ 632 (683)
|||++...... .......||+.|+|||++.... ++.++|||||||++|+|++|.+||......+.+.....
T Consensus 153 Dfg~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~ 223 (290)
T cd07862 153 DFGLARIYSFQ------MALTSVVVTLWYRAPEVLLQSS---YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 223 (290)
T ss_pred cccceEeccCC------cccccccccccccChHHHhCCC---CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence 99999865432 1223347899999999986443 78899999999999999999999987766544322111
Q ss_pred HHH-hhccCCC--------------------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 633 IIK-ARKVEFP--------------------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 633 i~~-~~~~~~p--------------------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
... .....++ ..+.++..+.+||.+||.+||++||++.++++||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 224 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 100 0000010 013578889999999999999999999999999998
No 52
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.1e-42 Score=365.52 Aligned_cols=263 Identities=28% Similarity=0.448 Sum_probs=213.2
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
+..++|.+.+.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||++++++|. +
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~ 74 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNSPYIVGFYGAFY-S 74 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCCCcccceeEEEE-E
Confidence 456789999999999999999999999999999998765321 123456889999999999999999999997 6
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
.+.+|+||||+++++|.+++...+.+++..+..++.+++.||.|||+. .+|+|+||||+|||++.+|.+||+|||++..
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 153 (333)
T cd06650 75 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (333)
T ss_pred CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCChhhEEEcCCCCEEEeeCCcchh
Confidence 778999999999999999998888899999999999999999999974 2599999999999999999999999999976
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH---------
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRE--------- 630 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~--------- 630 (683)
..... .....||+.|+|||++.... ++.++|||||||++|+|++|+.||............
T Consensus 154 ~~~~~-------~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (333)
T cd06650 154 LIDSM-------ANSFVGTRSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPA 223 (333)
T ss_pred hhhhc-------cccCCCCccccCHHHhcCCC---CCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcc
Confidence 54321 12346899999999986433 789999999999999999999999754432211000
Q ss_pred --------------------------------HHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 631 --------------------------------DTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 631 --------------------------------~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
..+.......++ ...++.++.+||.+||.+||.+||++.+++.||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~ 302 (333)
T cd06650 224 ESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLP-SGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFI 302 (333)
T ss_pred ccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCC-CCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHH
Confidence 000000000111 12367899999999999999999999999999999
Q ss_pred CCC
Q 005678 679 TYS 681 (683)
Q Consensus 679 ~~~ 681 (683)
+..
T Consensus 303 ~~~ 305 (333)
T cd06650 303 KRS 305 (333)
T ss_pred hcC
Confidence 764
No 53
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.2e-42 Score=373.59 Aligned_cols=269 Identities=26% Similarity=0.409 Sum_probs=217.9
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
.+..++|.+.+.||+|+||.||+|.+..++..||+|++..... ........+.+|+.+++.++||||++++++|.
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~- 113 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM----IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ- 113 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh----hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-
Confidence 3456789999999999999999999999999999998743211 11122346778999999999999999999986
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
+...+|+|||||+||+|.+++... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 114 DDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEEecccce
Confidence 678899999999999999999765 4899999999999999999999965 9999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSK-TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~-~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
.+..... .......||+.|+|||++.... ...++.++|||||||++|+|++|..||........+.. .+....
T Consensus 191 ~~~~~~~----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~--i~~~~~ 264 (370)
T cd05621 191 KMDETGM----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK--IMDHKN 264 (370)
T ss_pred ecccCCc----eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH--HHhCCc
Confidence 7643211 1123457999999999986543 23478899999999999999999999987655433221 111223
Q ss_pred ccCCCCCcCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 005678 638 KVEFPSRPAVSNEAKDLIRRCLTYNQAE--RPDVLTLAQDPYLTYS 681 (683)
Q Consensus 638 ~~~~p~~~~~s~el~dLI~rCL~~dP~k--RPS~~eLl~hP~l~~~ 681 (683)
.+.+|....++..++++|.+||..++.+ |+++.++++||||+..
T Consensus 265 ~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 265 SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 4566666678999999999999855543 8999999999999853
No 54
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6e-42 Score=364.70 Aligned_cols=252 Identities=27% Similarity=0.414 Sum_probs=206.9
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||+||+|.+..+++.||||++..... ........+..|..++..+ .||||++++++|. +.+.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI----LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ-TPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH----hhccHHHHHHHHHHHHHhccCCCchhceeeEEE-cCCEEEEEE
Confidence 369999999999999999999999998754321 1122345677888888876 6999999999986 678899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 76 Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--- 150 (320)
T cd05590 76 EFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--- 150 (320)
T ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---
Confidence 99999999999988888999999999999999999999865 9999999999999999999999999987543221
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|+.||........+. . +....+.+| ..+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~---~-i~~~~~~~~--~~~ 219 (320)
T cd05590 151 --KTTSTFCGTPDYIAPEILQEML---YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFE---A-ILNDEVVYP--TWL 219 (320)
T ss_pred --CcccccccCccccCHHHHcCCC---CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH---H-HhcCCCCCC--CCC
Confidence 1123347999999999986443 7889999999999999999999998766543221 1 112222333 458
Q ss_pred CHHHHHHHHHhcccCCCCCCCH------HHHhcCcccCCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDV------LTLAQDPYLTYS 681 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~------~eLl~hP~l~~~ 681 (683)
+.++.+||.+||..||.+||++ .++++||||...
T Consensus 220 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 220 SQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 9999999999999999999998 999999999753
No 55
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.2e-42 Score=365.73 Aligned_cols=263 Identities=26% Similarity=0.375 Sum_probs=209.0
Q ss_pred ceeEEEEecccCceEEEEEEEc---cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 404 RYALLNLLGKGGFSEVYKAYDL---VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~---~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
.|.+++.||+|+||.||++.+. .++..||+|++..... .........+..|+.++..+ .||||+.++++|. +
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-~ 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAAL---VQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ-T 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHH---hhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-c
Confidence 4889999999999999998763 4789999999854321 11223345678899999999 4999999999886 6
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
.+.+++||||+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++.
T Consensus 77 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 77 EAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 7789999999999999999987778999999999999999999999865 99999999999999999999999999976
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
+...... ......||+.|+|||++... ..++.++|||||||++|+|++|..||.............. .....
T Consensus 155 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~--~~~~~ 226 (332)
T cd05614 155 FLSEEKE----RTYSFCGTIEYMAPEIIRGK--GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR--RILKC 226 (332)
T ss_pred ccccCCC----ccccccCCccccCHHHhcCC--CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH--HHhcC
Confidence 5332111 12234799999999998632 2367899999999999999999999964322111100001 11112
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTY 680 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~ 680 (683)
..+.++.++..+.+||.+||..||.+|| ++.++++||||+.
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 227 DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 2233356899999999999999999999 8899999999975
No 56
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-41 Score=362.07 Aligned_cols=256 Identities=26% Similarity=0.381 Sum_probs=209.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCC-ceeeeccccccCCce
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHH-HIVRLWDTFEIDQNT 482 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hp-nIV~L~~~f~~d~~~ 482 (683)
.|.+++.||+|+||.||+|.+..++..||||++...... .......+..|..++..+.|+ +|+.++++|. +.+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII----QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE-cCCE
Confidence 488999999999999999999999999999998543211 122345678899999999775 5788888875 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.....
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 9999999999999999988878999999999999999999999965 99999999999999999999999999875322
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
.. .......||+.|+|||++.... ++.++|||||||++|+|++|+.||......+.+.. +......+
T Consensus 154 ~~-----~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~----i~~~~~~~- 220 (324)
T cd05587 154 GG-----KTTRTFCGTPDYIAPEIIAYQP---YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS----IMEHNVSY- 220 (324)
T ss_pred CC-----CceeeecCCccccChhhhcCCC---CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCCCC-
Confidence 11 1122347999999999986443 78999999999999999999999987655433221 11222333
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCH-----HHHhcCcccCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDV-----LTLAQDPYLTY 680 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~-----~eLl~hP~l~~ 680 (683)
+..++.++.+||.+||..+|.+|++. .++++||||..
T Consensus 221 -~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 221 -PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred -CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 34689999999999999999999976 89999999975
No 57
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-44 Score=355.78 Aligned_cols=263 Identities=30% Similarity=0.439 Sum_probs=221.4
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
.+.+.|.+.+.||+|.|+.||++.+..+|+.+|+|++....-... ..+.+.+|+.|-..|+|||||+|.+.+. +
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-----~~e~l~rEarIC~~LqHP~IvrL~~ti~-~ 81 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-----DFQKLEREARICRKLQHPNIVRLHDSIQ-E 81 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-----cHHHHHHHHHHHHhcCCCcEeehhhhhc-c
Confidence 456789999999999999999999999999999999866543332 3567889999999999999999999986 6
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC---CCcEEEEecCC
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE---FGVAKVTDFGL 556 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~---~g~vKL~DFGl 556 (683)
.+..|+|+|+|.|++|..-|-..-.+++..+-.++.||+.||.|+|..+ |||||+||.|+||-+ ..-+||+|||+
T Consensus 82 ~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~--IvHRDvkP~nllLASK~~~A~vKL~~FGv 159 (355)
T KOG0033|consen 82 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNG--IVHRDLKPENLLLASKAKGAAVKLADFGL 159 (355)
T ss_pred cceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeeeeccCCCceeecccce
Confidence 7889999999999999877755456899999999999999999999955 999999999999953 44699999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
+..+... ......+|||.|||||++.... |+..+|||+.|||||-||.|.+||..... .+++. ..+...
T Consensus 160 Ai~l~~g------~~~~G~~GtP~fmaPEvvrkdp---y~kpvDiW~cGViLfiLL~G~~PF~~~~~-~rlye-~I~~g~ 228 (355)
T KOG0033|consen 160 AIEVNDG------EAWHGFAGTPGYLSPEVLKKDP---YSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYE-QIKAGA 228 (355)
T ss_pred EEEeCCc------cccccccCCCcccCHHHhhcCC---CCCcchhhhhhHHHHHHHhCCCCCCCccH-HHHHH-HHhccc
Confidence 9988733 2234458999999999987444 99999999999999999999999977443 33332 222333
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
-.+..|.++.+++++++||++||..||.+|.|+.++|+|||+...
T Consensus 229 yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 229 YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 344455688999999999999999999999999999999999753
No 58
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.1e-42 Score=363.87 Aligned_cols=253 Identities=31% Similarity=0.451 Sum_probs=207.2
Q ss_pred EEecccCceEEEEEEEc---cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEE
Q 005678 409 NLLGKGGFSEVYKAYDL---VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~---~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~L 485 (683)
+.||+|+||.||++.+. .+++.||||++...... ........+..|+.+++.++||||++++++|. ..+.+|+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-~~~~~~l 77 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-TGGKLYL 77 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-cCCeEEE
Confidence 67999999999999863 47889999998543211 11223456778999999999999999999987 5678999
Q ss_pred EEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcC
Q 005678 486 VLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVG 565 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~ 565 (683)
||||+++++|..++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 154 (323)
T cd05584 78 ILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG- 154 (323)
T ss_pred EEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-
Confidence 9999999999999988888999999999999999999999865 9999999999999999999999999987543221
Q ss_pred CCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCc
Q 005678 566 SQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRP 645 (683)
Q Consensus 566 ~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~ 645 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|+.||........+. .+ ... .++.++
T Consensus 155 ----~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~---~~-~~~--~~~~~~ 221 (323)
T cd05584 155 ----TVTHTFCGTIEYMAPEILMRSG---HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTID---KI-LKG--KLNLPP 221 (323)
T ss_pred ----CcccccCCCccccChhhccCCC---CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHH---HH-HcC--CCCCCC
Confidence 1122347999999999986443 7889999999999999999999997765443221 11 112 233345
Q ss_pred CCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 646 AVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 646 ~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
.+++.+.+||.+||..+|.+|| ++.+++.||||...
T Consensus 222 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 222 YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 7899999999999999999999 89999999999753
No 59
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.1e-41 Score=353.51 Aligned_cols=260 Identities=25% Similarity=0.404 Sum_probs=210.3
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|++.+.||+|+||+||++.+..+++.||||++..... ........+.+|+.+++.++||||++++++|. +.+.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI----KKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-TKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhh----hhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-CCCeE
Confidence 37889999999999999999989999999998754321 11222345678999999999999999999986 56789
Q ss_pred EEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
|+||||+++++|..++... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||+++++.++|+|||++....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 9999999999999888532 46899999999999999999999965 9999999999999999999999999998764
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.... .....|++.|+|||++... .++.++|||||||++|+|++|..||...............+.....
T Consensus 154 ~~~~------~~~~~~~~~y~aPE~~~~~---~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-- 222 (285)
T cd05605 154 EGET------IRGRVGTVGYMAPEVVKNE---RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE-- 222 (285)
T ss_pred CCCc------cccccCCCCccCcHHhcCC---CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc--
Confidence 3211 1233789999999998643 3788999999999999999999999765443322111111111112
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
.....++..+.+||.+||..||.+|| ++.++++||||...
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 223 EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 22346899999999999999999999 89999999999863
No 60
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-43 Score=378.30 Aligned_cols=260 Identities=27% Similarity=0.470 Sum_probs=222.7
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
...|..+.+||+|+||.||+|+|..+++.||||++.+... ...+..+..|+.++.+++++||..+|++|- .+.
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~------~deIediqqei~~Ls~~~~~~it~yygsyl-~g~ 84 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA------EDEIEDIQQEISVLSQCDSPNITEYYGSYL-KGT 84 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhc------chhhHHHHHHHHHHHhcCcchHHhhhhhee-ecc
Confidence 3467788999999999999999999999999999876533 223678889999999999999999999995 788
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.++++||||.||++.+.|+..+.+.+.++..|+.+++.||.|||..+ .+|||||+.|||+...|.+||+|||.+..+.
T Consensus 85 ~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~~g~vkl~DfgVa~ql~ 162 (467)
T KOG0201|consen 85 KLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSESGDVKLADFGVAGQLT 162 (467)
T ss_pred cHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc--eecccccccceeEeccCcEEEEecceeeeee
Confidence 89999999999999999999988899999999999999999999865 9999999999999999999999999998876
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
... ......+|||.|||||++.... |+.|+||||||++.+||++|.+||........++. |.+...+.+
T Consensus 163 ~~~-----~rr~tfvGTPfwMAPEVI~~~~---Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl---Ipk~~PP~L 231 (467)
T KOG0201|consen 163 NTV-----KRRKTFVGTPFWMAPEVIKQSG---YDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL---IPKSAPPRL 231 (467)
T ss_pred chh-----hccccccccccccchhhhcccc---ccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe---ccCCCCCcc
Confidence 543 2235669999999999998444 99999999999999999999999987665322211 111111111
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSKK 683 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K~ 683 (683)
. ..+|+.+++||..||.+||..||++.+|++|+|++.+|+
T Consensus 232 ~--~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k 271 (467)
T KOG0201|consen 232 D--GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKK 271 (467)
T ss_pred c--cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCC
Confidence 1 268999999999999999999999999999999999875
No 61
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.9e-42 Score=366.25 Aligned_cols=253 Identities=29% Similarity=0.458 Sum_probs=207.9
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEe
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
+.||+|+||.||++.+..++..||||++...... ....+..+..|+.++..++||||++++++|. +.+.+|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~----~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~-~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV----AKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhCCCCCCCceEEEEE-cCCEEEEEEe
Confidence 3699999999999999999999999998543211 1223456778999999999999999999886 6778999999
Q ss_pred cccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCc
Q 005678 489 YCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 489 y~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
|+++++|..++.....+++..+..++.||+.||.|||+. .+|+||||||+|||++.+|.+||+|||+++.......
T Consensus 76 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~-~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--- 151 (325)
T cd05594 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--- 151 (325)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc---
Confidence 999999999998888899999999999999999999972 2499999999999999999999999999875432211
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVS 648 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s 648 (683)
......||+.|+|||++.... ++.++|||||||++|+|++|..||......... . .+....+.+| ..++
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~-~---~i~~~~~~~p--~~~~ 220 (325)
T cd05594 152 --TMKTFCGTPEYLAPEVLEDND---YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-E---LILMEEIRFP--RTLS 220 (325)
T ss_pred --ccccccCCcccCCHHHHccCC---CCCccccccccceeeeeccCCCCCCCCCHHHHH-H---HHhcCCCCCC--CCCC
Confidence 122347999999999986443 789999999999999999999999765543222 1 1222333333 4689
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 649 NEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
+++.+||.+||..||.+|+ ++.++++||||...
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999999999997 89999999999753
No 62
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.4e-41 Score=361.89 Aligned_cols=255 Identities=30% Similarity=0.446 Sum_probs=206.1
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHH---HhhcCCCceeeeccccccCCc
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNI---HKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~i---l~~L~HpnIV~L~~~f~~d~~ 481 (683)
|.+++.||+|+||.||+|.+..++..||||++...... .......+.+|+.+ ++.++||||++++++|. +.+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII----ARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-TED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccccCCCChhceeeEEE-cCC
Confidence 67899999999999999999999999999998543211 11223445555554 45678999999999986 678
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+|+||||+++++|..++... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD-VFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 899999999999999888654 5999999999999999999999865 9999999999999999999999999987543
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
... .......||+.|+|||++.... ++.++|||||||++|+|++|..||......+... .+ ......+
T Consensus 153 ~~~-----~~~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~---~i-~~~~~~~ 220 (324)
T cd05589 153 GFG-----DRTSTFCGTPEFLAPEVLTETS---YTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFD---SI-VNDEVRY 220 (324)
T ss_pred CCC-----CcccccccCccccCHhHhcCCC---CCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHH---HH-HhCCCCC
Confidence 211 1123347999999999986443 7889999999999999999999998765543221 11 1222333
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
| ..++..+.+||.+||..||.+|| ++.++++||||...
T Consensus 221 p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 221 P--RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred C--CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 3 46899999999999999999999 79999999999764
No 63
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=346.27 Aligned_cols=258 Identities=31% Similarity=0.463 Sum_probs=220.3
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
-+.|.+.+.||+|-||.||.|+...++..||+|++..+- ......-..+.||+.|.+.|+||||+++|++|- +..
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq----i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh-d~~ 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ----ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH-DSK 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH----HHHhcchhhhhheeEeecccCCccHHhhhhhee-ccc
Confidence 357899999999999999999999999999999975432 222333456889999999999999999999994 888
Q ss_pred eEEEEEecccCCChhHHHh--cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 482 TFCTVLEYCSGKDLDAVLK--ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~--~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
..|+++||.+.|+|...|. ....+++..+..++.|++.||.|+|. ++||||||||.|+|++..|.+||+|||.+..
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~--k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL--KRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc--CCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 9999999999999999998 66789999999999999999999998 5699999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
.+.. ...+.+||..|+|||...+.. ++..+|+|++|++.||++.|.+||......+.+-. +....+
T Consensus 174 ~p~~-------kR~tlcgt~dyl~pEmv~~~~---hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr----I~k~~~ 239 (281)
T KOG0580|consen 174 APSN-------KRKTLCGTLDYLPPEMVEGRG---HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR----IRKVDL 239 (281)
T ss_pred cCCC-------CceeeecccccCCHhhcCCCC---ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH----HHHccc
Confidence 6522 133448999999999887555 89999999999999999999999987664333321 222334
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.+| +.++.++.++|.+||.++|.+|.+..+++.|||+...+
T Consensus 240 ~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~~ 280 (281)
T KOG0580|consen 240 KFP--STISGGAADLISRLLVKNPIERLALTEVMDHPWIVANG 280 (281)
T ss_pred cCC--cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhcC
Confidence 444 78999999999999999999999999999999997543
No 64
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.6e-41 Score=343.70 Aligned_cols=259 Identities=33% Similarity=0.557 Sum_probs=208.9
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
|++++.||+|+||+||++.+..++..||+|++...... ........+|+.+++.++||||+++++++. +...++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-----~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~ 74 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-----EEEREENIREIKILRRLRHPNIVQILDVFQ-DDNYLY 74 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-----HHHHHHHHHHHHHHHHHTBTTBCHEEEEEE-ESSEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-----ccccchhhhhhhcccccccccccccccccc-cccccc
Confidence 78999999999999999999999999999998654321 112234456999999999999999999986 577889
Q ss_pred EEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCc
Q 005678 485 TVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDV 564 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~ 564 (683)
+||||+++++|..++.....+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||++......
T Consensus 75 ~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~- 151 (260)
T PF00069_consen 75 IVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN- 151 (260)
T ss_dssp EEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEESTTSEEEESSGTTTEESTST-
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccc-
Confidence 99999999999999987777999999999999999999999965 999999999999999999999999999764111
Q ss_pred CCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH-HhhccCCCC
Q 005678 565 GSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII-KARKVEFPS 643 (683)
Q Consensus 565 ~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~-~~~~~~~p~ 643 (683)
........||+.|+|||++. ....++.++||||||+++|+|++|..||................ .........
T Consensus 152 ----~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T PF00069_consen 152 ----NENFNPFVGTPEYMAPEVLQ--QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQ 225 (260)
T ss_dssp ----TSEBSSSSSSGGGSCHHHHT--TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTS
T ss_pred ----cccccccccccccccccccc--ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccc
Confidence 12234557999999999986 12237899999999999999999999998773222222111111 111112222
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
....+..+.++|.+||..+|.+||++.++++||||
T Consensus 226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 226 SREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 22334899999999999999999999999999997
No 65
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.1e-42 Score=356.36 Aligned_cols=263 Identities=25% Similarity=0.409 Sum_probs=214.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc-CCc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI-DQN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~-d~~ 481 (683)
+.|..++.|++|+||.||+|.|+.+++.||+|.++..... ..+--..+|||.+|.+++|||||.+-.+..- +-+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek-----~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK-----EGFPITSLREINILLKARHPNIVEVKEVVVGSNMD 150 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccccc-----CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc
Confidence 4688899999999999999999999999999998765422 1223467899999999999999999877642 345
Q ss_pred eEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+|+|||||+ .||..++..- .+|...+++.++.|++.||+|||.. .|+||||||+|+|+...|.+||+|||+|+.+
T Consensus 151 ~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~--wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 151 KIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN--WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc--eeEecccchhheeeccCCcEEecccchhhhh
Confidence 6999999995 5999999654 4899999999999999999999985 4999999999999999999999999999987
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh-h--
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA-R-- 637 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~-~-- 637 (683)
.... ......+-|.||.|||.+.+.+ .|+..+|+||+|||+.||+++++.|.+....+.+...-.+... .
T Consensus 228 gsp~-----k~~T~lVVTLWYRaPELLLG~~--tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 228 GSPL-----KPYTPLVVTLWYRAPELLLGAK--TYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred cCCc-----ccCcceEEEeeecCHHHhcCCc--ccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence 6541 1233447899999999987554 4999999999999999999999999887776665432221110 0
Q ss_pred ------------ccCCCCC-----------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 638 ------------KVEFPSR-----------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 638 ------------~~~~p~~-----------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.+.|+.. ..+++...+|+..+|.+||.+|.|+.++|+|+||.-
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 1111111 125688999999999999999999999999999974
No 66
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.2e-41 Score=363.48 Aligned_cols=259 Identities=23% Similarity=0.369 Sum_probs=205.2
Q ss_pred ccccccceeEEEEecccCceEEEEEEE-----ccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceee
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYD-----LVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVR 471 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d-----~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~ 471 (683)
|.+..++|.+.+.||+|+||.||+|.+ ..++..||||++..... ......+.+|+.++..+ +||||++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h~niv~ 75 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT------ASEHKALMSELKILIHIGNHLNVVN 75 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc------hHHHHHHHHHHHHHHHhccCcceee
Confidence 567788999999999999999999974 23457899998753321 12245788999999999 8999999
Q ss_pred eccccccCCceEEEEEecccCCChhHHHhcC-------------------------------------------------
Q 005678 472 LWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT------------------------------------------------- 502 (683)
Q Consensus 472 L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~------------------------------------------------- 502 (683)
++++|....+.+++||||+++|+|.+++...
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 9998875667789999999999999998542
Q ss_pred -------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcc
Q 005678 503 -------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGM 569 (683)
Q Consensus 503 -------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~ 569 (683)
..+++..+..++.||+.||.|||+.+ |+||||||.|||++.++.+||+|||+++.+......
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~--- 230 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 230 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCccceEEEcCCCcEEEeecccccccccCcch---
Confidence 24778888999999999999999865 999999999999999999999999999865432111
Q ss_pred cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCC
Q 005678 570 ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVS 648 (683)
Q Consensus 570 ~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s 648 (683)
.......+++.|+|||++.... ++.++|||||||++|+|++ |..||......+.+.. .+.... ....+..++
T Consensus 231 ~~~~~~~~~~~y~aPE~~~~~~---~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~--~~~~~~--~~~~~~~~~ 303 (338)
T cd05102 231 VRKGSARLPLKWMAPESIFDKV---YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ--RLKDGT--RMRAPENAT 303 (338)
T ss_pred hcccCCCCCccccCcHHhhcCC---CCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH--HHhcCC--CCCCCCCCC
Confidence 1122235678899999886443 8899999999999999996 9999976554333322 111111 222335688
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 649 NEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
+.+.+||.+||..||.+|||+.++++
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999999999999999999999975
No 67
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.9e-41 Score=352.99 Aligned_cols=254 Identities=28% Similarity=0.374 Sum_probs=203.5
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecc
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYC 490 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~ 490 (683)
||+|+||+||+|.+..+++.||||.+..... ........+..|+.+++.++||||++++++|. ..+.+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL----KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ-TKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHH----hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-CCCeEEEEEeCC
Confidence 7999999999999999999999998754321 11223456788999999999999999999886 667899999999
Q ss_pred cCCChhHHHh----cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCC
Q 005678 491 SGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGS 566 (683)
Q Consensus 491 ~ggsL~~~L~----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~ 566 (683)
++++|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++..+.....
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~- 152 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS- 152 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-
Confidence 9999998873 3356899999999999999999999965 99999999999999999999999999976543211
Q ss_pred CcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcC
Q 005678 567 QGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPA 646 (683)
Q Consensus 567 ~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~ 646 (683)
......||+.|+|||++.... ++.++|||||||++|+|++|+.||..................... ..++.
T Consensus 153 ----~~~~~~g~~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~ 223 (280)
T cd05608 153 ----KTKGYAGTPGFMAPELLQGEE---YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV--TYPDK 223 (280)
T ss_pred ----cccccCCCcCccCHHHhcCCC---CCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC--CCccc
Confidence 122347999999999987543 788999999999999999999999754332111110010111112 22346
Q ss_pred CCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 647 VSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 647 ~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
++..+.+|+.+||..||.+|| ++.++++||||+..
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 899999999999999999999 88999999999763
No 68
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.4e-41 Score=342.46 Aligned_cols=262 Identities=28% Similarity=0.435 Sum_probs=214.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||.|+||.||.|.+..++..||+|.+........ ....+..+.+|+.+++.++||||+++++++. +...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~ 78 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPE--TKKEVNALECEIQLLKNLQHERIVQYYGCLR-DDET 78 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchh--hHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-cCCe
Confidence 458889999999999999999999999999998765432211 2233567889999999999999999999997 5679
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+++||||+++++|.+++...+.+++..+..++.+++.||.|||+.+ |+|+||+|.|||++.++.++|+|||++.....
T Consensus 79 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 79 LSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 9999999999999999988888999999999999999999999865 99999999999999999999999999976543
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
..... .......|+..|+|||++.... ++.++|||||||++|+|++|+.||........+.. .........
T Consensus 157 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~ 227 (263)
T cd06625 157 ICSSG--TGMKSVTGTPYWMSPEVISGEG---YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPQ 227 (263)
T ss_pred ccccc--ccccCCCcCccccCcceeccCC---CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH----HhccCCCCC
Confidence 21110 1112346889999999987544 78999999999999999999999976554433321 111112222
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.+..++..+.+||.+||..+|.+||++.++++||||
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 334688999999999999999999999999999997
No 69
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.3e-41 Score=363.41 Aligned_cols=253 Identities=28% Similarity=0.415 Sum_probs=205.6
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||.||+|.+..++..||||++..... .....+..+.+|..++..+ +||||++++++|. +.+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~----~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV----NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ-TESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh----hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE-cCCEEEEEE
Confidence 368999999999999999999999999854321 1123356678899999988 7999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
|||+|++|..++...+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 76 e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 150 (329)
T cd05588 76 EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--- 150 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEECcCccccccccCC---
Confidence 99999999999987788999999999999999999999965 9999999999999999999999999987532211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchH-------HHHHHHHHHHHhhccC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQ-------ERILREDTIIKARKVE 640 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~-------e~il~~~~i~~~~~~~ 640 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|+.||...... ..... .......+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 223 (329)
T cd05588 151 --DTTSTFCGTPNYIAPEILRGED---YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLF--QVILEKQIR 223 (329)
T ss_pred --CccccccCCccccCHHHHcCCC---CCCccceechHHHHHHHHHCCCCcccccccccccccchHHHH--HHHHcCCCC
Confidence 1123347999999999986543 788999999999999999999999532111 11111 112222233
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCC------HHHHhcCcccCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPD------VLTLAQDPYLTY 680 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS------~~eLl~hP~l~~ 680 (683)
+| ..++..+.+||.+||..||.+||+ +.++++||||..
T Consensus 224 ~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 224 IP--RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CC--CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 33 468999999999999999999997 789999999975
No 70
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.3e-41 Score=361.60 Aligned_cols=251 Identities=26% Similarity=0.390 Sum_probs=206.9
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||.||+|.+..++..||||++...... .......+..|..++..+ .||||++++++|. +.+.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL----QDDDVDCTMTEKRILALAAKHPFLTALHCCFQ-TKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh----hhhHHHHHHHHHHHHHhccCCCCccceeeEEE-cCCeEEEEE
Confidence 3689999999999999999999999998543211 122345667788888866 7999999999996 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.......
T Consensus 76 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--- 150 (321)
T cd05591 76 EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--- 150 (321)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeecccceecccCC---
Confidence 99999999999988888999999999999999999999965 9999999999999999999999999987543221
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|+.||........+.. +......+| ..+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~----i~~~~~~~p--~~~ 219 (321)
T cd05591 151 --VTTTTFCGTPDYIAPEILQELE---YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES----ILHDDVLYP--VWL 219 (321)
T ss_pred --ccccccccCccccCHHHHcCCC---CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH----HHcCCCCCC--CCC
Confidence 1123347999999999986443 78899999999999999999999987665443321 112222333 458
Q ss_pred CHHHHHHHHHhcccCCCCCC-------CHHHHhcCcccCC
Q 005678 648 SNEAKDLIRRCLTYNQAERP-------DVLTLAQDPYLTY 680 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRP-------S~~eLl~hP~l~~ 680 (683)
+.++.+||.+||..+|.+|| ++.++++||||..
T Consensus 220 ~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 220 SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 99999999999999999999 8999999999965
No 71
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3e-41 Score=359.13 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=210.7
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCce
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~ 482 (683)
.|.+++.||+|+||.||+|.+..++..||||++...... .......+..|..++..+ .||+|+.++++|. +.+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ-TMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe-cCCE
Confidence 378899999999999999999999999999998643211 122244567788888777 5889999998886 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++|+|..++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 9999999999999999988778999999999999999999999865 99999999999999999999999999975432
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
.. .......||+.|+|||++.... ++.++|||||||++|+|++|..||........... +......+|
T Consensus 154 ~~-----~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~----i~~~~~~~p 221 (323)
T cd05616 154 DG-----VTTKTFCGTPDYIAPEIIAYQP---YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEHNVAYP 221 (323)
T ss_pred CC-----CccccCCCChhhcCHHHhcCCC---CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHH----HHhCCCCCC
Confidence 21 1123347999999999987443 89999999999999999999999987655433211 122333333
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCH-----HHHhcCcccCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDV-----LTLAQDPYLTYS 681 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~-----~eLl~hP~l~~~ 681 (683)
..++.++.+||.+||..+|.+|+++ .++++||||...
T Consensus 222 --~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 222 --KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred --CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 4689999999999999999999984 899999999754
No 72
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-42 Score=363.55 Aligned_cols=258 Identities=31% Similarity=0.511 Sum_probs=222.9
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
-+.++|.+.+.||+|.||.|-+|++...|+.||||.+..+.. +....+-++.||+.||+.|+||||+.+|.+|+ +
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkI----kdeqDlvhIRREIeIMSsLNHPhII~IyEVFE-N 124 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKI----KDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE-N 124 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhc----ccHHHHHHHHHHHHHHhhcCCCceeehhhhhc-C
Confidence 467899999999999999999999999999999999876543 34455779999999999999999999999997 7
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
.+.++|||||..+|.|++|+.+.+.|++.+++.+++||++|+.|+|..+ ++|||||..|||||.++++||+|||++..
T Consensus 125 kdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred CceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc--ceecccchhheeecCCCCeeeeccchhhh
Confidence 7889999999999999999999999999999999999999999999854 99999999999999999999999999988
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
+... .+..+++|+|.|.+||++.+.. .-.+.+|.|||||+||.|++|..||.+.+-...+ ..+..+.+
T Consensus 203 y~~~------kfLqTFCGSPLYASPEIvNG~P--Y~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lv----rQIs~GaY 270 (668)
T KOG0611|consen 203 YADK------KFLQTFCGSPLYASPEIVNGTP--YKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLV----RQISRGAY 270 (668)
T ss_pred hccc------cHHHHhcCCcccCCccccCCCC--CCCCccchhhHHHHHHHHhhcccccCCchHHHHH----HHhhcccc
Confidence 7654 3445669999999999986443 3467899999999999999999999876543322 12333333
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.- |..+.++.-||+.||..||++|.|+.+++.|=|+.
T Consensus 271 rE---P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 271 RE---PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred cC---CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 33 34567788999999999999999999999998875
No 73
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-41 Score=371.62 Aligned_cols=257 Identities=22% Similarity=0.263 Sum_probs=203.2
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
...+|.+++.||+|+||.||+|.+..+++.||+|... ...+.+|+.+++.++|||||+++++|. ..
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------------~~~~~~E~~il~~l~HpnIv~~~~~~~-~~ 155 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------------RGGTATEAHILRAINHPSIIQLKGTFT-YN 155 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------------hhhhHHHHHHHHhCCCCCCCCEeEEEE-EC
Confidence 4467999999999999999999999999999999642 124578999999999999999999996 56
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
...|+|+|++ +++|..++.....+++..++.|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||++...
T Consensus 156 ~~~~lv~e~~-~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~--IvHrDiKP~NIll~~~~~vkL~DFG~a~~~ 232 (391)
T PHA03212 156 KFTCLILPRY-KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR--IIHRDIKAENIFINHPGDVCLGDFGAACFP 232 (391)
T ss_pred CeeEEEEecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence 7889999999 5789998877777999999999999999999999965 999999999999999999999999999754
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch-------HHHHHHH---
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT-------QERILRE--- 630 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~-------~e~il~~--- 630 (683)
..... .......||+.|+|||++.... ++.++|||||||++|+|++|..||..... ...+...
T Consensus 233 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~ 305 (391)
T PHA03212 233 VDINA----NKYYGWAGTIATNAPELLARDP---YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRR 305 (391)
T ss_pred ccccc----cccccccCccCCCChhhhcCCC---CCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHH
Confidence 32211 1122347999999999986443 89999999999999999999988743211 0000000
Q ss_pred ----------------HHHH--Hhhc-c----CCCC---CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 631 ----------------DTII--KARK-V----EFPS---RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 631 ----------------~~i~--~~~~-~----~~p~---~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
..+. .... . ..+. ...++.++.+||.+||.+||.+|||+.++++||||+..
T Consensus 306 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 306 SGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 0000 0000 0 0010 11356789999999999999999999999999999753
No 74
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.4e-41 Score=349.13 Aligned_cols=258 Identities=29% Similarity=0.470 Sum_probs=200.8
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc---CCCceeeeccccccC-
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL---VHHHIVRLWDTFEID- 479 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L---~HpnIV~L~~~f~~d- 479 (683)
+|.+.+.||+|+||+||+|.+..++..||+|.+......... ...+.+|+.+++.+ +||||++++++|...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~ 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL-----PLSTVREVALLKRLEAFDHPNIVRLMDVCATSR 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC-----chHHHHHHHHHHHhhhcCCCCeeeeeeeecccc
Confidence 588999999999999999999999999999987653221111 12344566666555 799999999987532
Q ss_pred ---CceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEec
Q 005678 480 ---QNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDF 554 (683)
Q Consensus 480 ---~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DF 554 (683)
...+++||||++ ++|..++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+||
T Consensus 76 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 76 TDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred CCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECcc
Confidence 356899999996 4888888643 35899999999999999999999966 999999999999999999999999
Q ss_pred CCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH
Q 005678 555 GLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 555 Gls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~ 634 (683)
|++........ .....||+.|+|||++.... ++.++|||||||++|+|++|.+||........+.......
T Consensus 153 g~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~ 223 (288)
T cd07863 153 GLARIYSCQMA------LTPVVVTLWYRAPEVLLQST---YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 223 (288)
T ss_pred CccccccCccc------CCCccccccccCchHhhCCC---CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHh
Confidence 99987643211 12346899999999986443 8899999999999999999999997765544332211111
Q ss_pred Hh-------hccC-----CC---------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 635 KA-------RKVE-----FP---------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 635 ~~-------~~~~-----~p---------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.. .... +. ..+.++..+.+||.+||.+||.+||++.+++.||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 224 GLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred CCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 0000 00 114578889999999999999999999999999998
No 75
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2e-41 Score=365.10 Aligned_cols=260 Identities=26% Similarity=0.415 Sum_probs=205.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
-..|.+++.||+|+||.||+|.+..++..||||++.... .......+.+|+.+++.++|+||++++++|. +.+
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~ 145 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH------EDTVRRQICREIEILRDVNHPNVVKCHDMFD-HNG 145 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC------cHHHHHHHHHHHHHHHhCCCCCcceeeeEec-cCC
Confidence 346778899999999999999999999999999875432 1223457889999999999999999999986 677
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++|||||.+++|... ..+++..+..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||++..+.
T Consensus 146 ~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 146 EIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred eEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 89999999999998653 23567788899999999999999865 9999999999999999999999999998764
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
... .......||+.|+|||++.... ....+.++|||||||++|+|++|+.||......+.......+... .
T Consensus 220 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~ 292 (353)
T PLN00034 220 QTM-----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMS--Q 292 (353)
T ss_pred ccc-----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhcc--C
Confidence 321 1123347999999999875322 123456899999999999999999999743322111111111111 1
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.......++.++.+||.+||..||.+||++.++++||||...
T Consensus 293 ~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 293 PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 122235688999999999999999999999999999999765
No 76
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.4e-41 Score=378.85 Aligned_cols=261 Identities=22% Similarity=0.343 Sum_probs=201.6
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCC------Cceeee
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVH------HHIVRL 472 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~H------pnIV~L 472 (683)
.+..++|.+++.||+|+||+||+|.+..++..||||++.... .....+..|+.++..+.| ++|+.+
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i 196 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--------KYTRDAKIEIQFMEKVRQADPADRFPLMKI 196 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--------hhHHHHHHHHHHHHHHhhcCcccCcceeee
Confidence 345688999999999999999999999999999999985321 112334556666666654 568999
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-----
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG----- 547 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g----- 547 (683)
+++|..+..++|+||+++ |++|.+++...+.+++..+..|+.||+.||.|||.. .+||||||||+|||++.++
T Consensus 197 ~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 197 QRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTE-LHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc-CCeecCCCCHHHEEEecCCccccc
Confidence 998876677899999999 778999988778899999999999999999999973 2499999999999998655
Q ss_pred -----------cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCC
Q 005678 548 -----------VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRR 616 (683)
Q Consensus 548 -----------~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~ 616 (683)
.+||+|||++...... ....+||+.|+|||++.... |+.++|||||||++|||++|+.
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~~--------~~~~~gt~~Y~APE~~~~~~---~~~~~DiwSlGvil~elltG~~ 343 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERHS--------RTAIVSTRHYRSPEVVLGLG---WMYSTDMWSMGCIIYELYTGKL 343 (467)
T ss_pred ccccccCCCCceEEECCCCccccCccc--------cccccCCccccCcHHhhcCC---CCcHHHHHHHHHHHHHHHhCCC
Confidence 4999999988643221 22347999999999987544 8999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHH--------------------hhccCCCC----------------CcCCCHHHHHHHHHhcc
Q 005678 617 PFGHDQTQERILREDTIIK--------------------ARKVEFPS----------------RPAVSNEAKDLIRRCLT 660 (683)
Q Consensus 617 PF~~~~~~e~il~~~~i~~--------------------~~~~~~p~----------------~~~~s~el~dLI~rCL~ 660 (683)
||......+.+.....+.. ......+. .......+.+||.+||.
T Consensus 344 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 423 (467)
T PTZ00284 344 LYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLH 423 (467)
T ss_pred CCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCC
Confidence 9977655433321111100 00000000 00113567899999999
Q ss_pred cCCCCCCCHHHHhcCcccCC
Q 005678 661 YNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 661 ~dP~kRPS~~eLl~hP~l~~ 680 (683)
+||.+|||+.++++||||+.
T Consensus 424 ~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 424 YDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred cChhhCCCHHHHhcCccccc
Confidence 99999999999999999986
No 77
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=400.47 Aligned_cols=269 Identities=29% Similarity=0.425 Sum_probs=232.2
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
.+-.+.|.++++||+|+||+|.++..+.++..||+|++..- +..+.....-|..|-.||..-+.++||.|+.+|+
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~----eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ- 145 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKW----EMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ- 145 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHH----HHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc-
Confidence 34567799999999999999999999999999999987431 1222334556888999999999999999999997
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
|..++|+|||||+||||-.++.++..+|+.-+++|+..|+.||..||+.| +|||||||+|||||.+|++||+|||.|-
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEecccCcEeeccchhHH
Confidence 88999999999999999999988889999999999999999999999976 9999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
.+..+ ++...+..+|||.|++||++.... .+.|...+|+||+||++||||+|..||....-.+.+-. .+...
T Consensus 224 km~~d----G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~K--Im~hk 297 (1317)
T KOG0612|consen 224 KMDAD----GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGK--IMNHK 297 (1317)
T ss_pred hcCCC----CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHH--Hhchh
Confidence 77644 334566779999999999986543 26799999999999999999999999987776665532 22223
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccCCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPD---VLTLAQDPYLTYS 681 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS---~~eLl~hP~l~~~ 681 (683)
..+.||....+|.++++||+++++ +|+.|.. +.++-.||||...
T Consensus 298 ~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 298 ESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred hhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 467889778899999999999997 8889988 9999999999764
No 78
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.6e-41 Score=366.93 Aligned_cols=270 Identities=26% Similarity=0.407 Sum_probs=218.5
Q ss_pred cccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
...+..++|.+.+.||+|+||.||+|.+..++..||+|++.... .........+.+|+.++..++||||++++++|
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~----~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE----MIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 112 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHH----hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 34455689999999999999999999999999999999874321 11122345677899999999999999999998
Q ss_pred ccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
. +...+|+|||||+|++|..++... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+
T Consensus 113 ~-~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 113 Q-DDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred E-cCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 6 678899999999999999999765 4899999999999999999999965 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK-TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~-~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~ 635 (683)
+..+.... ........||+.|+|||++.... .+.++.++|||||||++|+|++|..||........... .+..
T Consensus 189 a~~~~~~~----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~--i~~~ 262 (371)
T cd05622 189 CMKMNKEG----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK--IMNH 262 (371)
T ss_pred eeEcCcCC----cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHH--HHcC
Confidence 98764321 11123457999999999986543 23478999999999999999999999987655433211 1112
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCC
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAE--RPDVLTLAQDPYLTY 680 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~k--RPS~~eLl~hP~l~~ 680 (683)
.....+|..+.++..+++||.+||..++.+ |+++.++++||||..
T Consensus 263 ~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 263 KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred CCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 234566776789999999999999844433 789999999999975
No 79
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.1e-41 Score=354.23 Aligned_cols=262 Identities=28% Similarity=0.484 Sum_probs=208.1
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||+|+||.||+|.+..++..||||.+....... ....+.+|+.+++.++||||+++++++. ..+.
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~ 78 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------APCTAIREVSLLKDLKHANIVTLHDIVH-TDKS 78 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC------cchhHHHHHHHHHhCCCCCcceEEEEEe-eCCe
Confidence 57999999999999999999999999999999886543211 1234678999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||+++ +|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 79 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 155 (309)
T cd07872 79 LTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKS 155 (309)
T ss_pred EEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECccccceecC
Confidence 9999999965 78877754 445899999999999999999999865 9999999999999999999999999997653
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH------
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK------ 635 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~------ 635 (683)
.... ......||+.|+|||++... ..++.++|||||||++|+|++|+.||......+..........
T Consensus 156 ~~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 228 (309)
T cd07872 156 VPTK-----TYSNEVVTLWYRPPDVLLGS--SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEET 228 (309)
T ss_pred CCcc-----ccccccccccccCCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 3211 12234689999999987532 2378899999999999999999999976654433221111000
Q ss_pred ---------hhccCCC---------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 636 ---------ARKVEFP---------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 636 ---------~~~~~~p---------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.....++ ..+.++.++.+||.+||.+||.+|||+.++++||||+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 229 WPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292 (309)
T ss_pred HhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence 0001111 124578899999999999999999999999999999864
No 80
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.1e-41 Score=375.97 Aligned_cols=258 Identities=25% Similarity=0.392 Sum_probs=202.7
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID- 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d- 479 (683)
...+|.+++.||+|+||.||+|.+..++..||||.+.... ....+|+.+++.++|||||+++++|...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----------~~~~~Ei~il~~l~h~niv~l~~~~~~~~ 132 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----------QYKNRELLIMKNLNHINIIFLKDYYYTEC 132 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----------chHHHHHHHHHhcCCCCCcceeeeEeecc
Confidence 3468999999999999999999999999999999874321 1234699999999999999998876321
Q ss_pred ------CceEEEEEecccCCChhHHHh----cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-c
Q 005678 480 ------QNTFCTVLEYCSGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG-V 548 (683)
Q Consensus 480 ------~~~~~LV~Ey~~ggsL~~~L~----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g-~ 548 (683)
...+++||||+++ +|..++. ....+++..++.++.||+.||.|||+.+ ||||||||+|||++.++ .
T Consensus 133 ~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~~~~~ 209 (440)
T PTZ00036 133 FKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDPNTHT 209 (440)
T ss_pred cccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcCCCCc
Confidence 2357799999975 6766653 3467999999999999999999999965 99999999999999654 7
Q ss_pred EEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHH
Q 005678 549 AKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERIL 628 (683)
Q Consensus 549 vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il 628 (683)
+||+|||+|+.+..... .....||+.|+|||++... ..|+.++|||||||++|+|++|.+||......+.+.
T Consensus 210 vkL~DFGla~~~~~~~~------~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 281 (440)
T PTZ00036 210 LKLCDFGSAKNLLAGQR------SVSYICSRFYRAPELMLGA--TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV 281 (440)
T ss_pred eeeeccccchhccCCCC------cccCCCCcCccCHHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 99999999987643211 1234789999999987532 248999999999999999999999998776655443
Q ss_pred HHHHHHH-------------hhccCCCC----------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 629 REDTIIK-------------ARKVEFPS----------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 629 ~~~~i~~-------------~~~~~~p~----------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
....... ...+.+|. +...+.++.+||.+||.++|.+|||+.+++.||||..
T Consensus 282 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 282 RIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred HHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 3211100 01111221 1246789999999999999999999999999999964
No 81
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.3e-41 Score=360.05 Aligned_cols=251 Identities=30% Similarity=0.458 Sum_probs=203.2
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHH-HHhhcCCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYN-IHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~-il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||+||+|.+..++..||||++..... ........+..|.. +++.++||||++++++|. +.+.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~-~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAI----LKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-TADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH----hhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE-eCCEEEEEE
Confidence 369999999999999999999999999854321 11122344555555 567899999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.......
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 150 (323)
T cd05575 76 DYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--- 150 (323)
T ss_pred cCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC---
Confidence 99999999999988888999999999999999999999965 9999999999999999999999999987542211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......+... .+ ..... ...+.+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~---~i-~~~~~--~~~~~~ 219 (323)
T cd05575 151 --KTTSTFCGTPEYLAPEVLRKQP---YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD---NI-LNKPL--RLKPNI 219 (323)
T ss_pred --CccccccCChhhcChhhhcCCC---CCccccccccchhhhhhhcCCCCCCCCCHHHHHH---HH-HcCCC--CCCCCC
Confidence 1123347999999999986443 8899999999999999999999998765433221 11 11222 233568
Q ss_pred CHHHHHHHHHhcccCCCCCCCH----HHHhcCcccCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDV----LTLAQDPYLTY 680 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~----~eLl~hP~l~~ 680 (683)
+..+.+||.+||..||.+||++ .+++.||||..
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 220 SVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred CHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 9999999999999999999987 69999999965
No 82
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.2e-41 Score=362.05 Aligned_cols=254 Identities=28% Similarity=0.412 Sum_probs=204.7
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||.||+|.+..++..||+|++...... .......+.+|+.++..+ +||||++++++|. +.+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN----DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc----chhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-eCCEEEEEE
Confidence 3699999999999999999999999998653211 122345677888888776 7999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++.....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 76 E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--- 150 (329)
T cd05618 76 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--- 150 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC---
Confidence 99999999999988788999999999999999999999965 9999999999999999999999999987542211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchH-------HHHHHHHHHHHhhccC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQ-------ERILREDTIIKARKVE 640 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~-------e~il~~~~i~~~~~~~ 640 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||...... ...+. ..+......
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~--~~i~~~~~~ 223 (329)
T cd05618 151 --DTTSTFCGTPNYIAPEILRGED---YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF--QVILEKQIR 223 (329)
T ss_pred --CccccccCCccccCHHHHcCCC---CCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHH--HHHhcCCCC
Confidence 1122347999999999986443 788999999999999999999999521110 11111 112222333
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCC------HHHHhcCcccCCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPD------VLTLAQDPYLTYS 681 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS------~~eLl~hP~l~~~ 681 (683)
+| ..++..+.+||.+||..||.+||+ +.++++||||+..
T Consensus 224 ~p--~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 224 IP--RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CC--CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 33 468899999999999999999998 5899999999753
No 83
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.6e-41 Score=358.06 Aligned_cols=252 Identities=29% Similarity=0.427 Sum_probs=203.3
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhh-cCCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKT-LVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~-L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||.||+|.+..++..||||++....... ......+..|..++.. ..||||++++++|. ..+.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE----DDDVECTMVERRVLALAWEHPFLTHLFCTFQ-TKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEEE
Confidence 36999999999999999999999999986432111 1223345566667665 48999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||++|++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 76 e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--- 150 (316)
T cd05592 76 EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--- 150 (316)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC---
Confidence 99999999999988878999999999999999999999965 9999999999999999999999999997643221
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......+.+.. +......+ +..+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~~~~~~--~~~~ 219 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQK---YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS----ILNDRPHF--PRWI 219 (316)
T ss_pred --CccccccCCccccCHHHHcCCC---CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCCCC--CCCC
Confidence 1223347999999999986443 78999999999999999999999987665432211 11122222 3468
Q ss_pred CHHHHHHHHHhcccCCCCCCCHH-HHhcCcccCCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDVL-TLAQDPYLTYS 681 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~~-eLl~hP~l~~~ 681 (683)
+.++.+||.+||..+|.+||++. +++.||||...
T Consensus 220 ~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 220 SKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 99999999999999999999864 88899999753
No 84
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.5e-41 Score=361.67 Aligned_cols=261 Identities=25% Similarity=0.373 Sum_probs=203.9
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+.++|.+.+.||+|+||.||+|.+..++..||||++...... ......+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-----QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-----hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence 457899999999999999999999999999999988543221 122456778999999999999999999886332
Q ss_pred -----ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 481 -----NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 481 -----~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
..+|+||||+++ +|...+.. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 94 SLEEFQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred CccccceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEecCC
Confidence 357999999965 56666543 3888999999999999999999965 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH---
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT--- 632 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~--- 632 (683)
++....... ......||+.|+|||++.... ++.++|||||||++|+|++|+.||........+.....
T Consensus 169 ~a~~~~~~~------~~~~~~~t~~y~aPE~~~~~~---~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 239 (359)
T cd07876 169 LARTACTNF------MMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLG 239 (359)
T ss_pred CccccccCc------cCCCCcccCCCCCchhccCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 997643221 123347899999999986543 88999999999999999999999976554332211000
Q ss_pred -------------H--HHhhccC--------------CCC----CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 633 -------------I--IKARKVE--------------FPS----RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 633 -------------i--~~~~~~~--------------~p~----~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
+ ....... ++. ....+..+.+||.+||.+||.+|||+.+++.||||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 319 (359)
T cd07876 240 TPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319 (359)
T ss_pred CCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence 0 0000000 010 112467899999999999999999999999999986
Q ss_pred C
Q 005678 680 Y 680 (683)
Q Consensus 680 ~ 680 (683)
.
T Consensus 320 ~ 320 (359)
T cd07876 320 V 320 (359)
T ss_pred h
Confidence 3
No 85
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.2e-41 Score=356.91 Aligned_cols=252 Identities=29% Similarity=0.430 Sum_probs=206.9
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||+||+|.+..++..||||++..... ........+.+|..++..+ .||||++++++|. +.+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI----LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-TKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH----hhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEEE
Confidence 369999999999999999999999999854321 1122345667888888887 6999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||++|++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 150 (318)
T cd05570 76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--- 150 (318)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECCCCcEEecccCCCeecCcCC---
Confidence 99999999999988878999999999999999999999865 9999999999999999999999999987532211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......... . .+......+| ..+
T Consensus 151 --~~~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~-~---~i~~~~~~~~--~~~ 219 (318)
T cd05570 151 --VTTSTFCGTPDYIAPEILSYQP---YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELF-Q---SILEDEVRYP--RWL 219 (318)
T ss_pred --CcccceecCccccCHHHhcCCC---CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHH-H---HHHcCCCCCC--CcC
Confidence 1122346999999999986543 889999999999999999999999765543322 1 1122223333 468
Q ss_pred CHHHHHHHHHhcccCCCCCCCH-----HHHhcCcccCCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDV-----LTLAQDPYLTYS 681 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~-----~eLl~hP~l~~~ 681 (683)
+..+.+||.+||..||.+||++ .+++.||||...
T Consensus 220 ~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 220 SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999999999999999 999999999763
No 86
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.7e-41 Score=363.56 Aligned_cols=263 Identities=25% Similarity=0.364 Sum_probs=208.3
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC----
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ---- 480 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~---- 480 (683)
|.+.+.||+|+||.||+|.+..+++.||||.+..... .....+.+.+|+.+++.++||||+++++++....
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 76 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-----NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPF 76 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-----chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcccc
Confidence 6788999999999999999999999999998743211 1122457889999999999999999999986332
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..+|+||||+. ++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 77 ~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 77 EEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred ceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECCCCCEEeccccceeec
Confidence 27899999995 689888877778999999999999999999999965 999999999999999999999999999865
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH-------
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI------- 633 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i------- 633 (683)
...... ......||+.|+|||++.+. ..++.++|||||||++|+|++|+.||........+......
T Consensus 154 ~~~~~~----~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~ 227 (372)
T cd07853 154 EPDESK----HMTQEVVTQYYRAPEILMGS--RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLE 227 (372)
T ss_pred ccCccc----cCCCCCcCCCcCCHHHHcCC--CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 433211 12234689999999988643 23788999999999999999999999766544322111000
Q ss_pred ------------HHhhccCC-------CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 634 ------------IKARKVEF-------PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 634 ------------~~~~~~~~-------p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
........ .....++.++.+||.+||.+||.+|||+.+++.||||...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 228 AMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 00001111 1123468899999999999999999999999999999863
No 87
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.7e-41 Score=356.60 Aligned_cols=252 Identities=27% Similarity=0.395 Sum_probs=203.9
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||.||+|.+..++..||||++...... .......+..|..++..+ .||||++++++|. +.+.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL----IDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-TKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hcchHHHHHHHHHHHHhccCCCCccCeeEEEE-eCCEEEEEE
Confidence 3699999999999999999999999998543211 112234566777787754 8999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 150 (316)
T cd05620 76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--- 150 (316)
T ss_pred CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEeCccCCCeecccCC---
Confidence 99999999999988778999999999999999999999965 9999999999999999999999999987432211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......... . .+......+| ..+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~-~---~~~~~~~~~~--~~~ 219 (316)
T cd05620 151 --NRASTFCGTPDYIAPEILQGLK---YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF-E---SIRVDTPHYP--RWI 219 (316)
T ss_pred --CceeccCCCcCccCHHHHcCCC---CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-H---HHHhCCCCCC--CCC
Confidence 1123347999999999986444 889999999999999999999999766543322 1 1122222333 358
Q ss_pred CHHHHHHHHHhcccCCCCCCCH-HHHhcCcccCCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDV-LTLAQDPYLTYS 681 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~-~eLl~hP~l~~~ 681 (683)
+.++.+||.+||..||.+||++ .++++||||...
T Consensus 220 ~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 220 TKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 8999999999999999999997 588899999763
No 88
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.6e-41 Score=355.50 Aligned_cols=252 Identities=27% Similarity=0.410 Sum_probs=204.2
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhh-cCCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKT-LVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~-L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||+||+|.+..++..||||++...... .......+..|..++.. +.||||++++++|. +.+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL----MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh----hcchHHHHHHHHHHHHhccCCCcCcceEEEEE-eCCEEEEEE
Confidence 3699999999999999999999999998543211 11223456677788876 48999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 76 ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 150 (316)
T cd05619 76 EYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--- 150 (316)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC---
Confidence 99999999999987778999999999999999999999865 9999999999999999999999999987532211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......+.... +......+| ..+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~----i~~~~~~~~--~~~ 219 (316)
T cd05619 151 --AKTCTFCGTPDYIAPEILLGQK---YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS----IRMDNPCYP--RWL 219 (316)
T ss_pred --CceeeecCCccccCHHHHcCCC---CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhCCCCCC--ccC
Confidence 1122347999999999986443 88999999999999999999999976654332211 112222233 358
Q ss_pred CHHHHHHHHHhcccCCCCCCCHH-HHhcCcccCCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDVL-TLAQDPYLTYS 681 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~~-eLl~hP~l~~~ 681 (683)
+.++.+||.+||..+|.+||++. ++++||||...
T Consensus 220 ~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 220 TREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred CHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 89999999999999999999996 89999999763
No 89
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1e-40 Score=359.34 Aligned_cols=261 Identities=26% Similarity=0.376 Sum_probs=204.7
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+.++|.+++.||+|+||.||+|.+..++..||||.+...... ......+.+|+.+++.++||||++++++|....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 89 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-----QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 89 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-----hHHHHHHHHHHHHHHHhCCCchhceeeeeeccc
Confidence 457899999999999999999999999999999987543221 123456788999999999999999999886332
Q ss_pred -----ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 481 -----NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 481 -----~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
..+|+||||+++ +|...+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 90 ~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 90 SLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999965 66666653 3888999999999999999999965 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH-
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII- 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~- 634 (683)
+++...... ......||+.|+|||++.... ++.++|||||||++|+|++|+.||......+.+.......
T Consensus 165 ~~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (355)
T cd07874 165 LARTAGTSF------MMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235 (355)
T ss_pred ccccCCCcc------ccCCccccCCccCHHHHcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 998654321 123347899999999986443 8899999999999999999999997665443321110000
Q ss_pred ------------------Hh----hccC---------CC----CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 635 ------------------KA----RKVE---------FP----SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 635 ------------------~~----~~~~---------~p----~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.. .... ++ .....+..+.+||.+||..||.+|||+.++++||||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 236 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315 (355)
T ss_pred CCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence 00 0000 00 0122456789999999999999999999999999997
Q ss_pred C
Q 005678 680 Y 680 (683)
Q Consensus 680 ~ 680 (683)
.
T Consensus 316 ~ 316 (355)
T cd07874 316 V 316 (355)
T ss_pred c
Confidence 3
No 90
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.4e-40 Score=354.58 Aligned_cols=257 Identities=26% Similarity=0.396 Sum_probs=209.3
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCCce
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~~~ 482 (683)
.|.+.+.||+|+||.||+|.+..+++.||||++..... ........+..|..++..+. ||+|++++++|. +.+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV----IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ-TVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh----hhhhHHHHHHHHHHHHHhccCCCchhheeeEEe-cCCE
Confidence 36788999999999999999999999999999854321 11223456778888988886 567778888886 6678
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||++|++|..++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 9999999999999999988888999999999999999999999865 99999999999999999999999999875432
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
.. .......||+.|+|||++.... ++.++|||||||++|+|++|..||.......... . +......+|
T Consensus 154 ~~-----~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~---~-i~~~~~~~p 221 (323)
T cd05615 154 DG-----VTTRTFCGTPDYIAPEIIAYQP---YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ---S-IMEHNVSYP 221 (323)
T ss_pred CC-----ccccCccCCccccCHHHHcCCC---CCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH---H-HHhCCCCCC
Confidence 21 1123346999999999986443 7899999999999999999999998765533221 1 122223333
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTYS 681 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~~ 681 (683)
..++.++.+||.+||..+|.+|++ ..++++||||+..
T Consensus 222 --~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 222 --KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred --ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 468999999999999999999997 5789999999863
No 91
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.2e-42 Score=346.26 Aligned_cols=264 Identities=29% Similarity=0.444 Sum_probs=221.9
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccc-hhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCC
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWS-EDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~-~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~ 480 (683)
..|.--+.||.|+.+.|-+|....+|..+|+|++....... ..........-.+|+.||+++ .||+|+.|.|+|+ .+
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye-s~ 95 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE-SD 95 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc-Cc
Confidence 35666788999999999999999999999999886554321 111334455667899999998 6999999999997 56
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..+++|+|.|+.|.|.++|...-.+++.+.+.|+.|++.|+.|||.. +||||||||.|||++++-++||+|||++..+
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~--~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR--NIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh--hhhhcccChhheeeccccceEEeccceeecc
Confidence 77889999999999999999888899999999999999999999985 5999999999999999999999999999988
Q ss_pred ccCcCCCcccccccCCCCCccCCccccccc---CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELS---KTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~---~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
.... .....+|||+|+|||.+... ..+.|+..+|+|++|||||.||.|.+||.+....-.+ .++..+
T Consensus 174 ~~Ge------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML----R~ImeG 243 (411)
T KOG0599|consen 174 EPGE------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML----RMIMEG 243 (411)
T ss_pred CCch------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH----HHHHhc
Confidence 6542 23344899999999987543 3466999999999999999999999999775432221 234445
Q ss_pred ccCC--CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 638 KVEF--PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 638 ~~~~--p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.+.| |.|..+|...++||.+||..||.+|.|++++|.||||.
T Consensus 244 kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 244 KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 5544 56779999999999999999999999999999999994
No 92
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2e-41 Score=359.48 Aligned_cols=250 Identities=28% Similarity=0.412 Sum_probs=205.5
Q ss_pred EEecccCceEEEEEEEc---cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEE
Q 005678 409 NLLGKGGFSEVYKAYDL---VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~---~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~L 485 (683)
+.||+|+||.||++.+. .+|..||||++..... .......+..|+.++.+++||||++++++|. +.+.+|+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~l 75 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-----KVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-TEGKLYL 75 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-cCCEEEE
Confidence 57999999999999763 5789999999854321 1122345678999999999999999999986 6778999
Q ss_pred EEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcC
Q 005678 486 VLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVG 565 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~ 565 (683)
||||+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 76 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~- 152 (318)
T cd05582 76 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE- 152 (318)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-
Confidence 9999999999999987778999999999999999999999965 9999999999999999999999999987654321
Q ss_pred CCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCc
Q 005678 566 SQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRP 645 (683)
Q Consensus 566 ~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~ 645 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|+.||........+.. +..... ..+.
T Consensus 153 ----~~~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----i~~~~~--~~p~ 219 (318)
T cd05582 153 ----KKAYSFCGTVEYMAPEVVNRRG---HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM----ILKAKL--GMPQ 219 (318)
T ss_pred ----CceecccCChhhcCHHHHcCCC---CCCccceeccceEeeeeccCCCCCCCCCHHHHHHH----HHcCCC--CCCC
Confidence 1122347999999999986443 78899999999999999999999976654432211 111222 2335
Q ss_pred CCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCC
Q 005678 646 AVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTY 680 (683)
Q Consensus 646 ~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~ 680 (683)
.++..+.+||.+||..||.+||+ +.+++.||||..
T Consensus 220 ~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 220 FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 68999999999999999999999 788999999964
No 93
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.5e-40 Score=355.62 Aligned_cols=265 Identities=26% Similarity=0.407 Sum_probs=210.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+++.||+|+||.||++.+..++..||||++... ..........+..|+.++..++||||++++++|. +.+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKW----EMLKRAETACFREERDVLVNGDRRWITNLHYAFQ-DENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHH----HHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe-cCCe
Confidence 4689999999999999999999999999999998532 1122233456788999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||++|++|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||.|||++.+|.+||+|||++..+.
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 9999999999999999965 457999999999999999999999965 9999999999999999999999999987654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
.... .......||+.|+|||++.... ...++.++|||||||++|+|++|+.||......+.... ........
T Consensus 154 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~--i~~~~~~~ 227 (331)
T cd05597 154 ADGT----VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK--IMNHKEHF 227 (331)
T ss_pred CCCC----ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHH--HHcCCCcc
Confidence 3211 1112236999999999986422 23478899999999999999999999976654433221 11111122
Q ss_pred CCCC-CcCCCHHHHHHHHHhcccCCC--CCCCHHHHhcCcccCC
Q 005678 640 EFPS-RPAVSNEAKDLIRRCLTYNQA--ERPDVLTLAQDPYLTY 680 (683)
Q Consensus 640 ~~p~-~~~~s~el~dLI~rCL~~dP~--kRPS~~eLl~hP~l~~ 680 (683)
.++. .+.++..+.+||.+||..++. .||++.++++||||..
T Consensus 228 ~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 228 QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 3332 245899999999998865443 3789999999999964
No 94
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.7e-40 Score=357.50 Aligned_cols=261 Identities=26% Similarity=0.375 Sum_probs=205.0
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID- 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d- 479 (683)
+.++|.+.+.||+|+||.||+|++..+++.||||++...... ......+.+|+.+++.++||||++++++|...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~ 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-----QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-----chhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence 457899999999999999999999999999999988543221 12245678899999999999999999987532
Q ss_pred ----CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 480 ----QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 480 ----~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
...+|+||||+++ +|...+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 97 SLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECCCCcEEEEeCC
Confidence 2457999999965 77777654 3788999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH-
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII- 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~- 634 (683)
+++...... ......||+.|+|||++.... ++.++|||||||++|+|++|+.||......+.+.......
T Consensus 172 ~a~~~~~~~------~~~~~~~t~~y~aPE~~~~~~---~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 242 (364)
T cd07875 172 LARTAGTSF------MMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242 (364)
T ss_pred CccccCCCC------cccCCcccCCcCCHHHHhCCC---CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 998654321 123347899999999986543 8899999999999999999999997665543322110000
Q ss_pred -----------------Hhhcc--------------CCCC----CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 635 -----------------KARKV--------------EFPS----RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 635 -----------------~~~~~--------------~~p~----~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
..... .++. ....+..+.+||.+||.+||.+|||+.++++||||.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred CCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 00000 0010 112356789999999999999999999999999996
Q ss_pred C
Q 005678 680 Y 680 (683)
Q Consensus 680 ~ 680 (683)
.
T Consensus 323 ~ 323 (364)
T cd07875 323 V 323 (364)
T ss_pred c
Confidence 4
No 95
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9.1e-41 Score=356.67 Aligned_cols=253 Identities=25% Similarity=0.395 Sum_probs=205.8
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||+||+|.+..++..||||++..... .....+..+.+|+.++..+ .||||+.++++|. +.+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV----HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-TTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh----hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-eCCEEEEEE
Confidence 369999999999999999999999999854321 1223356788899999888 6999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++...+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--- 150 (327)
T cd05617 76 EYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--- 150 (327)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeCCCCEEEeccccceeccCCC---
Confidence 99999999999987778999999999999999999999965 9999999999999999999999999987532211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch------HHHHHHHHHHHHhhccCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT------QERILREDTIIKARKVEF 641 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~------~e~il~~~~i~~~~~~~~ 641 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||..... .+.+. .........+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~ 222 (327)
T cd05617 151 --DTTSTFCGTPNYIAPEILRGEE---YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLF---QVILEKPIRI 222 (327)
T ss_pred --CceecccCCcccCCHHHHCCCC---CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHH---HHHHhCCCCC
Confidence 1123347999999999986443 78999999999999999999999953211 11111 1122222333
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCC------HHHHhcCcccCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPD------VLTLAQDPYLTYS 681 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS------~~eLl~hP~l~~~ 681 (683)
| ..++..+.++|.+||.+||.+||+ +.+++.||||...
T Consensus 223 p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 223 P--RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred C--CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 3 468899999999999999999997 5799999999764
No 96
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2e-40 Score=346.54 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=207.4
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
|.+.+.||+|+||.||+|.+..+++.||||.+...... .......+..|+.++..++|+||+.+++.+. +.+.+|
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK----KRKGESMALNEKQILEKVNSRFVVSLAYAYE-TKDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc----chHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-cCCEEE
Confidence 67889999999999999999999999999987543221 1122345678999999999999999999986 567899
Q ss_pred EEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 485 TVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+||||++|++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.....
T Consensus 77 lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 999999999999988533 35899999999999999999999855 99999999999999999999999999876543
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
... .....||+.|+|||++.... ++.++|||||||++|+|++|..||..............+.......
T Consensus 155 ~~~------~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-- 223 (285)
T cd05630 155 GQT------IKGRVGTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEE-- 223 (285)
T ss_pred Ccc------ccCCCCCccccChHHHcCCC---CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhh--
Confidence 211 12237999999999986443 8899999999999999999999997643221111111111111111
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTY 680 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~ 680 (683)
....+++++.+||.+||..||.+||+ +.++++||||..
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 224 YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 23468899999999999999999999 899999999974
No 97
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.3e-41 Score=356.99 Aligned_cols=251 Identities=28% Similarity=0.438 Sum_probs=202.9
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHH-HHhhcCCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYN-IHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~-il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||+||+|.+..+|..||||++...... .......+..|.. +++.++||||++++++|. ..+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~-~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL----NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-TTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe-cCCEEEEEE
Confidence 3689999999999999999999999998543211 1122344555554 567799999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.......
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--- 150 (325)
T cd05604 76 DFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--- 150 (325)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC---
Confidence 99999999999988888999999999999999999999865 9999999999999999999999999987532211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......+.... +. .. .....+.+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~---~~-~~--~~~~~~~~ 219 (325)
T cd05604 151 --DTTTTFCGTPEYLAPEVIRKQP---YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDN---IL-HK--PLVLRPGA 219 (325)
T ss_pred --CCcccccCChhhCCHHHHcCCC---CCCcCccccccceehhhhcCCCCCCCCCHHHHHHH---HH-cC--CccCCCCC
Confidence 1123347999999999986543 78899999999999999999999977654432211 11 11 22233568
Q ss_pred CHHHHHHHHHhcccCCCCCCCH----HHHhcCcccCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDV----LTLAQDPYLTY 680 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~----~eLl~hP~l~~ 680 (683)
+..+.++|.+||..+|.+||++ .+++.||||..
T Consensus 220 ~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 220 SLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred CHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 9999999999999999999976 59999999975
No 98
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.1e-40 Score=357.17 Aligned_cols=262 Identities=27% Similarity=0.439 Sum_probs=206.5
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID- 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d- 479 (683)
+.++|.+++.||.|+||.||+|.+..++..||||.+..... .......+.+|+.+++.++||||++++++|...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-----SLIHARRTYRELRLLKHMKHENVIGLLDVFTPAT 87 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-----hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc
Confidence 34689999999999999999999999999999998754321 112245677899999999999999999988532
Q ss_pred ----CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 480 ----QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 480 ----~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
...+|++++++ +++|..++... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 88 ~~~~~~~~~~~~~~~-~~~l~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 88 SIENFNEVYLVTNLM-GADLNNIVKCQ-KLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cccccCcEEEEeecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECCCCCEEEcCCc
Confidence 24578999998 78998887654 5999999999999999999999965 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~ 635 (683)
++...... .....||+.|+|||++... ..++.++|||||||++|+|++|..||......+.+........
T Consensus 164 ~~~~~~~~--------~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 233 (343)
T cd07878 164 LARQADDE--------MTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVG 233 (343)
T ss_pred cceecCCC--------cCCccccccccCchHhcCC--ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhC
Confidence 99865432 1233789999999998642 2378899999999999999999999976554332221110000
Q ss_pred h------------------hc-cCCCC------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 636 A------------------RK-VEFPS------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 636 ~------------------~~-~~~p~------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
. .. ...+. ...+++.+.+||.+||..||.+|||+.+++.||||...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 234 TPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred CCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 0 00 00110 12356778999999999999999999999999999753
No 99
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.5e-40 Score=344.01 Aligned_cols=253 Identities=28% Similarity=0.375 Sum_probs=199.7
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecc
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYC 490 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~ 490 (683)
||+|+||.||++.+..+|..||+|.+..... ........+..|+.+++.++||||++++++|. +...+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~----~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~-~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRL----KKKSGEKMALLEKEILEKVNSPFIVNLAYAFE-SKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHh----hcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-cCCeEEEEEecC
Confidence 7999999999999999999999998743221 11112334567999999999999999999986 677899999999
Q ss_pred cCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCc
Q 005678 491 SGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 491 ~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
+|++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||.|||++.++.++|+|||++.......
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---- 149 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---- 149 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----
Confidence 999999888543 35888999999999999999999965 9999999999999999999999999987664321
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVS 648 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s 648 (683)
......||+.|+|||++.... ++.++|||||||++|+|++|..||....................+.++ ...++
T Consensus 150 --~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 223 (277)
T cd05607 150 --TITQRAGTNGYMAPEILKEEP---YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE-HQNFT 223 (277)
T ss_pred --eeeccCCCCCccCHHHHccCC---CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc-cccCC
Confidence 112346899999999986443 899999999999999999999999754322111110000111112221 23689
Q ss_pred HHHHHHHHHhcccCCCCCCCH----HHHhcCcccCC
Q 005678 649 NEAKDLIRRCLTYNQAERPDV----LTLAQDPYLTY 680 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRPS~----~eLl~hP~l~~ 680 (683)
.++.+||.+||.+||.+||++ .+++.||||..
T Consensus 224 ~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 224 EESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred HHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 999999999999999999999 67889999965
No 100
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.5e-40 Score=343.46 Aligned_cols=260 Identities=26% Similarity=0.417 Sum_probs=210.5
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|...+.||+|+||+||+|.+..+++.||||.+..... ........+.+|+.+++.++|+||+.++++|. .++.+
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI----KKRKGESMALNEKQILEKVNSQFVVNLAYAYE-TKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh----hhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-cCCEE
Confidence 37788999999999999999999999999998754321 11222345778999999999999999998886 67789
Q ss_pred EEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
|+||||+++++|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||.|||++.++.++|+|||++....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDDYGHIRISDLGLAVKIP 153 (285)
T ss_pred EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence 999999999999988853 346999999999999999999999865 9999999999999999999999999997654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.... .....|++.|+|||++.... ++.++|||||||++|+|++|..||.............. .......
T Consensus 154 ~~~~------~~~~~g~~~~~aPE~~~~~~---~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~--~~~~~~~ 222 (285)
T cd05632 154 EGES------IRGRVGTVGYMAPEVLNNQR---YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDR--RVLETEE 222 (285)
T ss_pred CCCc------ccCCCCCcCccChHHhcCCC---CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH--hhhcccc
Confidence 3211 12347899999999986433 78899999999999999999999976554332222111 1111122
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTYS 681 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~~ 681 (683)
...+.++..+.+||.+||..+|.+||+ +.+++.||||...
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 233568899999999999999999999 8899999999875
No 101
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.5e-40 Score=372.85 Aligned_cols=263 Identities=24% Similarity=0.390 Sum_probs=213.6
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
...++|.+.+.||+|+||+||+|.+..++..||||++....... .....+.+|+.++..+.|+||++++..|...
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~-----~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE-----ADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK 103 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH-----HHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence 45689999999999999999999999999999999986543221 2245678899999999999999998876432
Q ss_pred C-------ceEEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCc
Q 005678 480 Q-------NTFCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGV 548 (683)
Q Consensus 480 ~-------~~~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~ 548 (683)
. ..+++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCSNGL 181 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeCCCC
Confidence 1 147899999999999999853 346899999999999999999999965 999999999999999999
Q ss_pred EEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHH
Q 005678 549 AKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERIL 628 (683)
Q Consensus 549 vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il 628 (683)
+||+|||+++.+...... .......||+.|+|||++.... ++.++|||||||++|+|++|..||......+.+.
T Consensus 182 vkL~DFGls~~~~~~~~~---~~~~~~~Gt~~Y~aPE~~~~~~---~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~ 255 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSD---DVGRTFCGTPYYVAPEIWRRKP---YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMH 255 (496)
T ss_pred EEEEecccCeeccccccc---cccccccCCcceeCHHHhCCCC---CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 999999999876432111 1223457999999999986543 8999999999999999999999998765433221
Q ss_pred HHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 629 REDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 629 ~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
. +... ...+.++.+++++.+||.+||..+|.+||++.+++.|||++.
T Consensus 256 ~---~~~~--~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 256 K---TLAG--RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred H---HhcC--CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 1 1111 112334578999999999999999999999999999999753
No 102
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.8e-40 Score=345.92 Aligned_cols=263 Identities=29% Similarity=0.491 Sum_probs=209.0
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||+|.+....... ....+.+|+.+++.++||||+++++++. +.+.
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~E~~~l~~l~h~nI~~~~~~~~-~~~~ 78 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG------APCTAIREVSLLKDLKHANIVTLHDIIH-TEKS 78 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC------chhHHHHHHHHHHhcCCCCcceEEEEEe-cCCe
Confidence 46999999999999999999999999999999886543211 1235678999999999999999999996 6778
Q ss_pred EEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||++ ++|..++.. ...+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 155 (301)
T cd07873 79 LTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKS 155 (301)
T ss_pred EEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence 999999996 588888754 456899999999999999999999865 9999999999999999999999999997653
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH------
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK------ 635 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~------ 635 (683)
.... ......+++.|+|||++... ..++.++|||||||++|+|++|++||......+.+........
T Consensus 156 ~~~~-----~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 228 (301)
T cd07873 156 IPTK-----TYSNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEET 228 (301)
T ss_pred CCCC-----cccccceeecccCcHHHhCC--CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhh
Confidence 3211 11223678999999987532 2378899999999999999999999977655433221111100
Q ss_pred ------h---hccCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 636 ------A---RKVEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 636 ------~---~~~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
. ....++. .+.+++.+++||.+||.+||.+|||+.++++||||+..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 229 WPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred chhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0 0011111 135788999999999999999999999999999998754
No 103
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.9e-40 Score=336.55 Aligned_cols=264 Identities=29% Similarity=0.473 Sum_probs=214.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccc--hhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWS--EDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~--~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
+|.+...||.|+||.||+|.+..++..||+|.+....... ..........+.+|+.+++.++||||+++++++. +.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL-DAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-eCC
Confidence 4778899999999999999998899999999876543322 1223345678899999999999999999999986 677
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++||||+++++|..++...+.+++..+..++.|++.||.|||+.+ |+|+||+|+|||++.++.++|+|||+++...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG--IIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC--cccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 88999999999999999988888999999999999999999999865 9999999999999999999999999998775
Q ss_pred cCcCCCcc-cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 562 DDVGSQGM-ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 562 ~~~~~~~~-~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
........ .......|++.|+|||++.... ++.++|||||||++|+|++|..||........+... .. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~--~~~ 229 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTS---YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKI---GE--NAS 229 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCC---CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHH---hc--cCC
Confidence 32211111 1112235889999999886433 788999999999999999999999766544333221 11 111
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
...+..++..+.++|.+||..+|.+||++.++++||||
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 230 PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 12234688999999999999999999999999999997
No 104
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.8e-40 Score=353.31 Aligned_cols=265 Identities=26% Similarity=0.425 Sum_probs=211.5
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||+|+||.||++.+..++..||+|++.... .........+..|+.++..+.||||++++++|. +.+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE----MLKRAETACFREERDVLVNGDNQWITTLHYAFQ-DENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH----HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe-cCCE
Confidence 36899999999999999999999999999999874321 112223445778999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||+++|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 9999999999999999965 467899999999999999999999965 9999999999999999999999999987653
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH-hhc
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK-ARK 638 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~-~~~ 638 (683)
.... .......||+.|+|||++.... ...++.++|||||||++|+|++|+.||......+.+.. +.. ...
T Consensus 154 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~---i~~~~~~ 226 (332)
T cd05623 154 EDGT----VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHKER 226 (332)
T ss_pred cCCc----ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHH---HhCCCcc
Confidence 3211 1122347999999999986321 23478899999999999999999999987655443321 111 122
Q ss_pred cCCCCC-cCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 005678 639 VEFPSR-PAVSNEAKDLIRRCLTYNQAE--RPDVLTLAQDPYLTYS 681 (683)
Q Consensus 639 ~~~p~~-~~~s~el~dLI~rCL~~dP~k--RPS~~eLl~hP~l~~~ 681 (683)
..+|.. ..++.++.+||.+||..++.. |+++.++++||||+..
T Consensus 227 ~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 227 FQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred ccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 333432 368999999999999654444 6899999999999853
No 105
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.4e-41 Score=357.36 Aligned_cols=251 Identities=31% Similarity=0.439 Sum_probs=203.5
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc---CCCceeeeccccccCCceEEEEE
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL---VHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L---~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
||+|+||+||+|.+..++..||||++..... .....+..+..|..++..+ .||||+.++++|. +...+|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~-~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEI----VAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ-TDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHH----hhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe-cCCeEEEEE
Confidence 7999999999999999999999999743211 1122344566677777766 6999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--- 150 (330)
T cd05586 76 DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--- 150 (330)
T ss_pred cCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC---
Confidence 99999999999988888999999999999999999999965 9999999999999999999999999987543221
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... .++.++|||||||++|+|++|..||......+.+. .+......++. ..+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~----~i~~~~~~~~~-~~~ 221 (330)
T cd05586 151 --KTTNTFCGTTEYLAPEVLLDEK--GYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYR----NIAFGKVRFPK-NVL 221 (330)
T ss_pred --CCccCccCCccccCHHHHcCCC--CCCCccceeccccEEEEeccCCCCCCCCCHHHHHH----HHHcCCCCCCC-ccC
Confidence 1123347999999999885332 37889999999999999999999997765543221 12222333432 357
Q ss_pred CHHHHHHHHHhcccCCCCCC----CHHHHhcCcccCC
Q 005678 648 SNEAKDLIRRCLTYNQAERP----DVLTLAQDPYLTY 680 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRP----S~~eLl~hP~l~~ 680 (683)
+.++.+||.+||..||.+|| ++.++++||||..
T Consensus 222 ~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 222 SDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred CHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 89999999999999999998 7999999999975
No 106
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.4e-40 Score=354.39 Aligned_cols=251 Identities=30% Similarity=0.447 Sum_probs=202.4
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHH-HHhhcCCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYN-IHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~-il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||+||+|.+..++..||+|++..... ........+..|.. +++.++||||++++++|. +.+.+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~-~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAI----LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-TADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH----HhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE-cCCeEEEEE
Confidence 369999999999999999999999999854321 11112234444544 567889999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++.....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-- 151 (325)
T cd05602 76 DYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-- 151 (325)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--
Confidence 99999999999988778999999999999999999999965 99999999999999999999999999975432211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
......||+.|+|||++.... ++.++|||||||++|+|++|..||......+.+.. + .... ....+.+
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~---i-~~~~--~~~~~~~ 219 (325)
T cd05602 152 ---TTSTFCGTPEYLAPEVLHKQP---YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN---I-LNKP--LQLKPNI 219 (325)
T ss_pred ---CcccccCCccccCHHHHcCCC---CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHH---H-HhCC--cCCCCCC
Confidence 123347999999999986443 88999999999999999999999986655432211 1 1112 2234578
Q ss_pred CHHHHHHHHHhcccCCCCCCCHH----HHhcCcccCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDVL----TLAQDPYLTY 680 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~~----eLl~hP~l~~ 680 (683)
+..+.++|.+||..+|.+||++. ++++|+||..
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 220 TNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred CHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 99999999999999999999865 8999999965
No 107
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.2e-39 Score=331.96 Aligned_cols=255 Identities=28% Similarity=0.465 Sum_probs=209.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+.+.||+|+||.||++.+..++..||+|.+...... ......+.+|+.+++.++||||+++++.|......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-----RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLL 75 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-----HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEE
Confidence 488999999999999999999999999999987543221 122456788999999999999999998886556678
Q ss_pred EEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
|+||||+++++|.+++.. ...+++..+..++.+++.||.|||+.+ |+|+||||+|||++.++.++|+|||++....
T Consensus 76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEecCCcEEEecccceEEec
Confidence 999999999999999965 346899999999999999999999865 9999999999999999999999999998764
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.... ......|++.|+|||.+.... ++.++|||||||++|+|++|..||........... +... ...
T Consensus 154 ~~~~-----~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~---~~~~--~~~ 220 (257)
T cd08223 154 NQCD-----MASTLIGTPYYMSPELFSNKP---YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR---IIEG--KLP 220 (257)
T ss_pred ccCC-----ccccccCCcCccChhHhcCCC---CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH---HHhc--CCC
Confidence 3321 123346899999999886443 78899999999999999999999976554332211 1111 111
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
+....++..+.+||.+||..+|.+||++.+++.||||
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 2234688999999999999999999999999999997
No 108
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.1e-40 Score=352.00 Aligned_cols=251 Identities=29% Similarity=0.411 Sum_probs=202.0
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHH-HHhhcCCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYN-IHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~-il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|+||.||+|.+..++..||||++..... ........+..|.. +++.++||||++++++|. +.+.+|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTI----LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-TAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHH----HHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE-cCCEEEEEE
Confidence 369999999999999999999999999754321 11122344555554 678899999999999886 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
|||+|++|..++.....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++.......
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 150 (321)
T cd05603 76 DYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--- 150 (321)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC---
Confidence 99999999999987778999999999999999999999865 9999999999999999999999999987532211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......||+.|+|||++.... ++.++|||||||++|+|++|..||......... . . +......+ ++..
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~--~-i~~~~~~~--~~~~ 219 (321)
T cd05603 151 --ETTSTFCGTPEYLAPEVLRKEP---YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMY-D--N-ILHKPLQL--PGGK 219 (321)
T ss_pred --CccccccCCcccCCHHHhcCCC---CCCcCcccccchhhhhhhcCCCCCCCCCHHHHH-H--H-HhcCCCCC--CCCC
Confidence 1123347999999999986433 788999999999999999999999776543322 1 1 11222333 3468
Q ss_pred CHHHHHHHHHhcccCCCCCCCH----HHHhcCcccCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDV----LTLAQDPYLTY 680 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~----~eLl~hP~l~~ 680 (683)
+..+.++|.+||..+|.+||+. .++++||||..
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 220 TVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred CHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 8999999999999999999864 59999999974
No 109
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-42 Score=373.33 Aligned_cols=262 Identities=26% Similarity=0.441 Sum_probs=222.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.+.|.|+..||.|+||.||+|.++.++-..|.|++... ...-+..++-|+.||..++||+||+||++|. ..+
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk-------seEELEDylVEIeILa~CdHP~ivkLl~ayy-~en 102 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK-------SEEELEDYLVEIEILAECDHPVIVKLLSAYY-FEN 102 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc-------chhHHhhhhhhhhhhhcCCChHHHHHHHHHh-ccC
Confidence 45677888899999999999999988888999987432 2334678899999999999999999999996 466
Q ss_pred eEEEEEecccCCChhHHH-hcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVL-KATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L-~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.++|+.|||+||-.+.++ .-..+|++..+..++++++.||.|||+ ++|||||||.+|||++-+|.++|+|||.+-..
T Consensus 103 kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs--~~iIHRDLKAGNiL~TldGdirLADFGVSAKn 180 (1187)
T KOG0579|consen 103 KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHS--QNIIHRDLKAGNILLTLDGDIRLADFGVSAKN 180 (1187)
T ss_pred ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhh--cchhhhhccccceEEEecCcEeeecccccccc
Confidence 788999999999999887 445679999999999999999999998 56999999999999999999999999988543
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccc--cCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFEL--SKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~--~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
.. .......+.|||+|||||+... .+..+|++++||||||++|.+|.-+.+|.........++. +.+..+
T Consensus 181 ~~-----t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllK---iaKSeP 252 (1187)
T KOG0579|consen 181 KS-----TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKSEP 252 (1187)
T ss_pred hh-----HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHH---HhhcCC
Confidence 22 2233456689999999998754 3456799999999999999999999999887777665543 345555
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+.+-.+..++..+.+|+.+||..||..||++.+|++||||+++
T Consensus 253 PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 253 PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 6666667889999999999999999999999999999999965
No 110
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.1e-39 Score=334.75 Aligned_cols=264 Identities=25% Similarity=0.387 Sum_probs=212.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||+||+|.+ .++..||||.+........ ........+.+|+.+++.++|+||++++++|. +...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~ 77 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVL-AAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-DDNTI 77 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchh-hHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-cCCeE
Confidence 477889999999999999975 5788999998765433222 22234567889999999999999999999986 66899
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
++||||+++++|..++.....+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 78 SIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 999999999999999988778999999999999999999999865 999999999999999999999999998765322
Q ss_pred cCC-CcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 564 VGS-QGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 564 ~~~-~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
... ..........|++.|+|||++.... ++.++|||||||++|+|++|..||............ ........+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~ 229 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESG---YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI---GAHRGLMPR 229 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCC---CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh---hhccCCCCC
Confidence 111 1111223447899999999986443 788999999999999999999999765544333221 111111112
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
....++.++.+||++||..+|.+||++.+++.||||
T Consensus 230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 230 LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 334689999999999999999999999999999997
No 111
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-41 Score=366.86 Aligned_cols=255 Identities=29% Similarity=0.427 Sum_probs=212.3
Q ss_pred CccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecc
Q 005678 395 FNNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWD 474 (683)
Q Consensus 395 f~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~ 474 (683)
...|.+-...+.+++.||+|.||+||.|.. .....||+|.+...... ...|++|+.||++|+|+|||+||+
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~-~~~~~vavk~ik~~~m~--------~~~f~~Ea~iMk~L~H~~lV~l~g 268 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKW-NGSTKVAVKTIKEGSMS--------PEAFLREAQIMKKLRHEKLVKLYG 268 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEE-cCCCcccceEEeccccC--------hhHHHHHHHHHHhCcccCeEEEEE
Confidence 456677777888899999999999999963 33448999988654222 246779999999999999999999
Q ss_pred ccccCCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEE
Q 005678 475 TFEIDQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVT 552 (683)
Q Consensus 475 ~f~~d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~ 552 (683)
+|. ..+.+|||||||+.|+|.++|+. +..+.......++.|||.|++||.+. ++|||||-..|||+++++.+||+
T Consensus 269 V~~-~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~--~~IHRDLAARNiLV~~~~~vKIs 345 (468)
T KOG0197|consen 269 VCT-KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK--NYIHRDLAARNILVDEDLVVKIS 345 (468)
T ss_pred EEe-cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC--CccchhhhhhheeeccCceEEEc
Confidence 997 44579999999999999999975 56799999999999999999999985 59999999999999999999999
Q ss_pred ecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHH
Q 005678 553 DFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILRED 631 (683)
Q Consensus 553 DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~ 631 (683)
||||++.+.++... ....+.--.-|.|||++...+ +|.++|||||||+||||+| |+.||......+.+..
T Consensus 346 DFGLAr~~~d~~Y~----~~~~~kfPIkWtAPEa~~~~~---FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~-- 416 (468)
T KOG0197|consen 346 DFGLARLIGDDEYT----ASEGGKFPIKWTAPEALNYGK---FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLEL-- 416 (468)
T ss_pred ccccccccCCCcee----ecCCCCCCceecCHHHHhhCC---cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHH--
Confidence 99999965543211 111111233499999998666 9999999999999999997 9999998887765532
Q ss_pred HHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 632 TIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 632 ~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
.......|.++.||+++.+++..||..+|++|||+..+.
T Consensus 417 ---le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 417 ---LERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ---HhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 235577888889999999999999999999999998775
No 112
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-40 Score=340.34 Aligned_cols=260 Identities=22% Similarity=0.388 Sum_probs=210.5
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.++|.+.+.||.|+||.||+|.+..++..||+|++..... .....+.+|+.+++.++||||+++++++. +.+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-~~~ 79 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-------EDFAVVQQEIIMMKDCKHSNIVAYFGSYL-RRD 79 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-------hHHHHHHHHHHHHHhCCCCCeeeEEEEEE-eCC
Confidence 3578888999999999999999999999999999865421 11345678999999999999999999986 678
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++||||+++++|.+++...+.+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++....
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 80 KLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred EEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence 89999999999999999988888999999999999999999999865 9999999999999999999999999987654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
... .......|++.|+|||++.......++.++|||||||++|+|++|..||............. ........+
T Consensus 158 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~ 231 (267)
T cd06645 158 ATI-----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT-KSNFQPPKL 231 (267)
T ss_pred Ccc-----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh-ccCCCCCcc
Confidence 321 11233479999999999753333347889999999999999999999996554433222110 000111112
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPY 677 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~ 677 (683)
.....++..+.+||.+||..+|.+||++.+++.|||
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 232 KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 222357889999999999999999999999999998
No 113
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.2e-40 Score=388.35 Aligned_cols=271 Identities=24% Similarity=0.427 Sum_probs=217.6
Q ss_pred CCccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeec
Q 005678 394 RFNNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLW 473 (683)
Q Consensus 394 ~f~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~ 473 (683)
.|...++..++|.++..||.|+||+||+|.+..++..||+|++...... ......+..|+.++..|+|||||+++
T Consensus 4 ~~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-----e~~~~~~~~EI~IL~~L~HPNIVrl~ 78 (1021)
T PTZ00266 4 KYDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-----EREKSQLVIEVNVMRELKHKNIVRYI 78 (1021)
T ss_pred cccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-----HHHHHHHHHHHHHHHHcCCCCcCeEE
Confidence 3445566778999999999999999999999999999999998654321 12245788899999999999999999
Q ss_pred ccccc-CCceEEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcC-----CceEecccCCcceEe
Q 005678 474 DTFEI-DQNTFCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRA-----QKIIHYDLKPGNVLF 543 (683)
Q Consensus 474 ~~f~~-d~~~~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g-----~~IIHrDLKP~NILL 543 (683)
++|.. ....+||||||+++++|..+|.. ...+++..++.|+.||+.||.|||..+ .+|||+||||.||||
T Consensus 79 d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 79 DRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred EEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 98853 34678999999999999999854 356999999999999999999999854 359999999999999
Q ss_pred CC-----------------CCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHH
Q 005678 544 DE-----------------FGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGI 606 (683)
Q Consensus 544 d~-----------------~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGv 606 (683)
+. .+.+||+|||++..+.... ......||+.|+|||++.... ..++.++|||||||
T Consensus 159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------~~~s~vGTp~YmAPEvL~ge~-~~~s~KSDVWSLG~ 231 (1021)
T PTZ00266 159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------MAHSCVGTPYYWSPELLLHET-KSYDDKSDMWALGC 231 (1021)
T ss_pred ecCccccccccccccccCCCCceEEccCCccccccccc------cccccCCCccccCHHHHhccC-CCCCchhHHHHHHH
Confidence 64 3359999999998664321 122347999999999985432 33789999999999
Q ss_pred HHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 607 LFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 607 ILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
|||+|++|..||........++.. + . ....+| .+.++.++.+||..||..+|.+||++.+++.||||...
T Consensus 232 ILYELLTGk~PF~~~~~~~qli~~--l-k-~~p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 232 IIYELCSGKTPFHKANNFSQLISE--L-K-RGPDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HHHHHHHCCCCCCcCCcHHHHHHH--H-h-cCCCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 999999999999766554443321 1 1 111222 24578999999999999999999999999999999743
No 114
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.5e-40 Score=340.23 Aligned_cols=259 Identities=29% Similarity=0.507 Sum_probs=203.2
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||+|.+..+|..||+|.+...... ......+.+|+.+++.++||||+++++++. +.+.+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~-----~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~ 74 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-----EGVPSSALREICLLKELKHKNIVRLYDVLH-SDKKL 74 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc-----ccCccchhHHHHHHHhcCCCCeeeHHHHhc-cCCce
Confidence 588999999999999999999999999999988653221 112345678999999999999999999996 67789
Q ss_pred EEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
++|+||++ ++|..++.. .+.+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||++.....
T Consensus 75 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 151 (284)
T cd07839 75 TLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINKNGELKLADFGLARAFGI 151 (284)
T ss_pred EEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence 99999996 578777753 567999999999999999999999965 99999999999999999999999999976543
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH-HH-------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT-II------- 634 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~-i~------- 634 (683)
... ......+++.|+|||++... ..++.++|||||||++|+|++|..||.........+.... ..
T Consensus 152 ~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (284)
T cd07839 152 PVR-----CYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEES 224 (284)
T ss_pred CCC-----CcCCCccccCCcChHHHhCC--cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHH
Confidence 211 12233678999999987543 2368899999999999999999988644333322221100 00
Q ss_pred -----Hh-hccCCC----------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 635 -----KA-RKVEFP----------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 635 -----~~-~~~~~p----------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.. ....++ ..+.+++++.+||.+||..||.+|||+.+++.||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 225 WPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00 000000 113578899999999999999999999999999998
No 115
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.9e-40 Score=340.81 Aligned_cols=255 Identities=27% Similarity=0.438 Sum_probs=204.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+++.||.|+||.||+|.+..++..||+|++..+.. ......+.+|+.++++++||||++++++|. ..+.+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~ 74 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT------VELQKQIMSELEILYKCDSPYIIGFYGAFF-VENRI 74 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC------hHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-ECCEE
Confidence 57888999999999999999999999999998754321 122356888999999999999999999997 56788
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
++||||+++++|..+ ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++..+...
T Consensus 75 ~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 75 SICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred EEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 899999999999765 24788899999999999999999965 999999999999999999999999999765432
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH-H---HHHHHhhcc
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILR-E---DTIIKARKV 639 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~-~---~~i~~~~~~ 639 (683)
. .....||+.|+|||++.... ++.++|||||||++|+|++|..||........... . ..+......
T Consensus 149 ~-------~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (279)
T cd06619 149 I-------AKTYVGTNAYMAPERISGEQ---YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPP 218 (279)
T ss_pred c-------ccCCCCChhhcCceeecCCC---CCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCC
Confidence 1 22347899999999986443 78999999999999999999999965332111100 0 011111111
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.. .....+.++.+||.+||..+|.+||++.+++.||||+..+
T Consensus 219 ~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 219 VL-PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred CC-CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 11 1235788999999999999999999999999999998654
No 116
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.7e-40 Score=352.54 Aligned_cols=266 Identities=26% Similarity=0.398 Sum_probs=211.6
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||+|+||.||++.+..+++.||+|++.... .........+..|+.++..+.||||+.++++|. +.+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~-~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE----MLKRAETACFREERNVLVNGDCQWITTLHYAFQ-DENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH----HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCE
Confidence 47999999999999999999999999999999874321 112223456778999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||++||+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||.|||++.+|.+||+|||++....
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 9999999999999999976 467899999999999999999999865 9999999999999999999999999997664
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
.... .......||+.|+|||++.... ...++.++|||||||++|+|++|+.||......+.+.. .......+
T Consensus 154 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~--i~~~~~~~ 227 (331)
T cd05624 154 QDGT----VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK--IMNHEERF 227 (331)
T ss_pred CCCc----eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHH--HHcCCCcc
Confidence 3211 1122347999999999886421 13478899999999999999999999976655433221 11111223
Q ss_pred CCCC-CcCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 005678 640 EFPS-RPAVSNEAKDLIRRCLTYNQAE--RPDVLTLAQDPYLTYS 681 (683)
Q Consensus 640 ~~p~-~~~~s~el~dLI~rCL~~dP~k--RPS~~eLl~hP~l~~~ 681 (683)
.+|. ...++.++.+||.+||..++.+ |+++.++++||||...
T Consensus 228 ~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 228 QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 3333 2357899999999999866544 5689999999999753
No 117
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.2e-39 Score=331.33 Aligned_cols=253 Identities=32% Similarity=0.552 Sum_probs=209.5
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+.+.||+|+||.||+|.+..++..|++|.+...... ......+.+|+.+++.++||||++++++|. +.+.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~ 74 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-----RREREEAIDEARVLAKLDSSYIIRYYESFL-DKGKL 74 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-----HHHHHHHHHHHHHHHhcCCCCeehheeeec-cCCEE
Confidence 378889999999999999999999999999987543221 223457889999999999999999999986 67789
Q ss_pred EEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
|+||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++..+.
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~~~~~~l~df~~~~~~~ 152 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS 152 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeCCCCEEEcccccceecc
Confidence 9999999999999999653 57899999999999999999999865 9999999999999999999999999998765
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.... ......|++.|+|||++.... ++.++|||||||++|+|++|..||.......... .+.. ..+
T Consensus 153 ~~~~-----~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~---~~~ 218 (256)
T cd08529 153 DNTN-----FANTIVGTPYYLSPELCEDKP---YNEKSDVWALGVVLYECCTGKHPFDANNQGALIL---KIIR---GVF 218 (256)
T ss_pred Cccc-----hhhccccCccccCHHHhcCCC---CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHc---CCC
Confidence 4321 122346899999999986443 7889999999999999999999998766433221 1111 112
Q ss_pred CCC-cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 642 PSR-PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 642 p~~-~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
+.. ..++..+.++|.+||..+|++||++.++++|||+
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 219 PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 222 2678999999999999999999999999999996
No 118
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.7e-40 Score=368.76 Aligned_cols=258 Identities=30% Similarity=0.468 Sum_probs=210.5
Q ss_pred ccceeEEEEecccCceEEEEEEEccC-CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVE-HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~-g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
...|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+++.++|||||+++++|. ..
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-------~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-~~ 137 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-------ERQAAYARSELHCLAACDHFGIVKHFDDFK-SD 137 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-------HHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-EC
Confidence 44599999999999999999998777 7889999764321 122346778999999999999999999996 67
Q ss_pred ceEEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 481 NTFCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
+.+||||||++||+|.+++.. ..++++..+..++.||+.||.|||+.+ ||||||||.|||++.++.+||+|||+
T Consensus 138 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~~~~~kL~DFgl 215 (478)
T PTZ00267 138 DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMPTGIIKLGDFGF 215 (478)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECCCCcEEEEeCcC
Confidence 789999999999999988743 456899999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
++.+..... .......+||+.|+|||++.... ++.++|||||||++|+|++|..||......+.+. .+...
T Consensus 216 a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~---~~~~~ 286 (478)
T PTZ00267 216 SKQYSDSVS---LDVASSFCGTPYYLAPELWERKR---YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQ---QVLYG 286 (478)
T ss_pred ceecCCccc---cccccccCCCccccCHhHhCCCC---CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHhC
Confidence 987643211 12233457999999999986443 8999999999999999999999997655433221 11111
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.. .+.+..++.++.+||.+||..+|.+||++.+++.|||+..
T Consensus 287 ~~--~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 287 KY--DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred CC--CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 11 1223468899999999999999999999999999999864
No 119
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.3e-40 Score=338.91 Aligned_cols=260 Identities=22% Similarity=0.387 Sum_probs=209.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
...|.+.+.||+|+||.||+|.+..++..||+|++..... .....+.+|+.++..++||||++++++|. ..+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-------~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-~~~ 79 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-------DDFSLIQQEIFMVKECKHCNIVAYFGSYL-SRE 79 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-------chHHHHHHHHHHHHhcCCCCeeeeeEEEE-eCC
Confidence 4579999999999999999999999999999998854321 11245778999999999999999999986 677
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++||||+++++|.+++.....+++..+..++.|++.||.|||+.+ |+|+||+|.|||++.++.++|+|||++..+.
T Consensus 80 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 80 KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 89999999999999999987778999999999999999999999865 9999999999999999999999999998664
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.... ......|++.|+|||.+.......++.++|||||||++|+|++|..||.............. .......+
T Consensus 158 ~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~ 231 (267)
T cd06646 158 ATIA-----KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SNFQPPKL 231 (267)
T ss_pred cccc-----ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec-CCCCCCCC
Confidence 3211 12234688999999987543344478899999999999999999999965443322211000 00011112
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPY 677 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~ 677 (683)
+....++..+.+||.+||..+|.+||++.++++|+|
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 232 KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 222357889999999999999999999999999998
No 120
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-41 Score=352.64 Aligned_cols=258 Identities=28% Similarity=0.432 Sum_probs=209.6
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC-
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ- 480 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~- 480 (683)
.-.|.-.+++|.|+||.||.|....++..||||..-.+.. .-.+|+.||..++|||||+|..+|....
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----------~knrEl~im~~l~HpNIV~L~~~f~~~~~ 91 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----------YKNRELQIMRKLDHPNIVRLLYFFSSSTE 91 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----------cCcHHHHHHHhcCCcCeeeEEEEEEecCC
Confidence 4468889999999999999999999999999997533322 1236999999999999999998885432
Q ss_pred ---ceEEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCcEEEE
Q 005678 481 ---NTFCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGVAKVT 552 (683)
Q Consensus 481 ---~~~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~vKL~ 552 (683)
-..++||||||. +|..+++. +..++.-.++.+..||++||.|||..+ |+||||||.|||+|. .|.+|||
T Consensus 92 ~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~tg~LKic 168 (364)
T KOG0658|consen 92 SDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPDTGVLKIC 168 (364)
T ss_pred CchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCCCCeEEec
Confidence 246689999965 89988863 567999999999999999999999955 999999999999995 5999999
Q ss_pred ecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Q 005678 553 DFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT 632 (683)
Q Consensus 553 DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~ 632 (683)
|||.|+.+.....+. ....|..|.|||.+.+.. .|+.++||||.||++.||+-|++-|.+....+.+...-.
T Consensus 169 DFGSAK~L~~~epni------SYicSRyYRaPELifga~--~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik 240 (364)
T KOG0658|consen 169 DFGSAKVLVKGEPNI------SYICSRYYRAPELIFGAT--EYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIK 240 (364)
T ss_pred cCCcceeeccCCCce------eEEEeccccCHHHHcCcc--ccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHH
Confidence 999999887653322 236788999999987544 499999999999999999999999988887776643222
Q ss_pred HHH---------h--h--ccCCC----------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 633 IIK---------A--R--KVEFP----------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 633 i~~---------~--~--~~~~p----------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+.. . . ...+| ....+++++.+|+.++|.++|.+|.++.+++.||||...
T Consensus 241 ~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel 312 (364)
T KOG0658|consen 241 VLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL 312 (364)
T ss_pred HhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence 111 0 0 01111 124578999999999999999999999999999999753
No 121
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-40 Score=348.89 Aligned_cols=263 Identities=31% Similarity=0.517 Sum_probs=213.7
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCc-eeeeccccccCCc-
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHH-IVRLWDTFEIDQN- 481 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hpn-IV~L~~~f~~d~~- 481 (683)
.|..++.||+|.||+||+|+++.+|..||+|.+...... +-.-....||+.+++.|+|+| ||.|++++..+..
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-----EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~ 86 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-----EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNH 86 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-----cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccc
Confidence 466677899999999999999999999999998776432 112346789999999999999 9999999875443
Q ss_pred ----eEEEEEecccCCChhHHHhcCC----CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEe
Q 005678 482 ----TFCTVLEYCSGKDLDAVLKATP----VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTD 553 (683)
Q Consensus 482 ----~~~LV~Ey~~ggsL~~~L~~~~----~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~D 553 (683)
.+++|+||+ ..+|..++...+ .++...++.++.||+.||.|||+++ |+||||||.||||++.|.+||+|
T Consensus 87 ~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 87 RGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred cccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCCCcEeeec
Confidence 899999999 569999997654 4778899999999999999999965 99999999999999999999999
Q ss_pred cCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Q 005678 554 FGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI 633 (683)
Q Consensus 554 FGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i 633 (683)
||+|+...-. +.....-++|.||.|||++.+.. .|+..+||||+|||+.||++++..|......+.+...-.+
T Consensus 164 FGlAra~~ip-----~~~yt~evvTlWYRaPEvLlGs~--~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~ 236 (323)
T KOG0594|consen 164 FGLARAFSIP-----MRTYTPEVVTLWYRAPEVLLGST--SYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRL 236 (323)
T ss_pred cchHHHhcCC-----cccccccEEEeeccCHHHhcCCC--cCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 9999865422 22244458999999999987554 3999999999999999999999999888876665543322
Q ss_pred HHh-hccC-------------CCCC----------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 634 IKA-RKVE-------------FPSR----------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 634 ~~~-~~~~-------------~p~~----------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
... ..-. |+.+ +....+..+++..||.++|.+|.|+..++.||||...
T Consensus 237 lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 237 LGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 211 1111 2211 2233589999999999999999999999999999754
No 122
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-39 Score=337.53 Aligned_cols=259 Identities=30% Similarity=0.493 Sum_probs=204.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+.+.||.|+||.||+|.+..++..||||.+....... .....+.+|+.+++.++||||+++++++. +++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~ 74 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-----GVPSTAIREISLLKELQHPNIVCLQDVLM-QESRL 74 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC-----CchHHHHHHHHHHHhcCCCCEeeeEEEEe-eCCeE
Confidence 4788999999999999999998999999999875532211 12346778999999999999999999986 67789
Q ss_pred EEEEecccCCChhHHHhcC---CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT---PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~---~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
|+||||++ ++|..++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.+|.++|+|||++...
T Consensus 75 ~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 75 YLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred EEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 99999996 5888887432 46899999999999999999999865 999999999999999999999999999765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH-----
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK----- 635 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~----- 635 (683)
.... .......|++.|+|||++... ..++.++|||||||++|+|++|+.||.................
T Consensus 152 ~~~~-----~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd07861 152 GIPV-----RVYTHEVVTLWYRAPEVLLGS--PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTED 224 (285)
T ss_pred CCCc-----ccccCCcccccccChHHhcCC--CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 3321 112233678999999987533 2368899999999999999999999976654433322110000
Q ss_pred ---------hhccCCC---------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 ---------ARKVEFP---------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 ---------~~~~~~p---------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....++ ....+++++.+||.+||..||.+|||+.+++.||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 225 VWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0000000 123578999999999999999999999999999997
No 123
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.4e-39 Score=334.94 Aligned_cols=263 Identities=27% Similarity=0.431 Sum_probs=209.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-Cce
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-QNT 482 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-~~~ 482 (683)
.|...+.||+|+||.||+|.+..++..||+|.+........ .......+.+|+.+++.++||||+++++++... ...
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPE--TSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKT 80 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCch--hHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCE
Confidence 58889999999999999999999999999998765432221 223456788999999999999999999987643 467
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+++++||+++++|.+++.....+++.....++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++..+..
T Consensus 81 ~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 81 LTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 8899999999999999987777999999999999999999999855 99999999999999999999999999876543
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
..... .......|+..|+|||++.... ++.++|||||||++|+|++|..||........+... ........+
T Consensus 159 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~--~~~~~~~~~- 230 (266)
T cd06651 159 ICMSG--TGIRSVTGTPYWMSPEVISGEG---YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKI--ATQPTNPQL- 230 (266)
T ss_pred ccccC--CccccCCccccccCHHHhCCCC---CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHH--hcCCCCCCC-
Confidence 21110 1112235889999999986433 788999999999999999999999766544333211 111111111
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
+..++..+.+|| +||..+|.+||++.++++||||+.
T Consensus 231 -~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~~ 266 (266)
T cd06651 231 -PSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQL 266 (266)
T ss_pred -chhcCHHHHHHH-HHhcCChhhCcCHHHHhcCccccC
Confidence 235788899998 688889999999999999999973
No 124
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1e-39 Score=337.56 Aligned_cols=261 Identities=26% Similarity=0.448 Sum_probs=210.5
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+...||.|+||.||+|.+..++..||+|++....... ...+.+.+|+.+++.++||||++++++|. ....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~ 74 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP-----VIKKIALREIRMLKQLKHPNLVNLIEVFR-RKRK 74 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc-----cccHHHHHHHHHHHhCCCCCEeeeeeEEe-eCCE
Confidence 47999999999999999999999899999999875432111 11245778999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+++||||+++++|..++.....+++..+..++.||+.||.|||+.+ |+|+||||.||+++.++.++|+|||++.....
T Consensus 75 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 75 LHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred EEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 8999999999999988877777999999999999999999999955 99999999999999999999999999987654
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA------ 636 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~------ 636 (683)
... ......|+..|+|||++... ..++.++|||||||++|+|++|..||......+...........
T Consensus 153 ~~~-----~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (286)
T cd07847 153 PGD-----DYTDYVATRWYRAPELLVGD--TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQ 225 (286)
T ss_pred Ccc-----cccCcccccccCCHHHHhCC--CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 321 12233688999999987532 23788999999999999999999999876655443321111000
Q ss_pred ---------hccCCCC----------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 637 ---------RKVEFPS----------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 637 ---------~~~~~p~----------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....|. .+.++..+.+||.+||..+|++||++.+++.||||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 226 QIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred hhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0001111 13568889999999999999999999999999998
No 125
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-39 Score=334.39 Aligned_cols=267 Identities=23% Similarity=0.375 Sum_probs=212.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|...+.||+|+||.||+|.+..++..||+|++...... ..........+.+|+.+++.++||||++++++|. +.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~-~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 78 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNT-SSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-EDSHF 78 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCC-chhHHHHHHHHHHHHHHHHHcCCCceehhhceec-cCCeE
Confidence 377889999999999999999999999999988644321 1223345678899999999999999999999986 67789
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-cEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG-VAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g-~vKL~DFGls~~~~~ 562 (683)
++||||+++++|.+++...+.+++..+..++.||+.||.|||+.+ |+|+||+|.||+++.++ .++|+|||++.....
T Consensus 79 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999999999988778999999999999999999999965 99999999999998766 699999999977654
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
...... .......|+..|+|||.+... .++.++|||||||++|+|++|..||..............+. .......
T Consensus 157 ~~~~~~-~~~~~~~~~~~~~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~ 231 (268)
T cd06630 157 KGTGAG-EFQGQLLGTIAFMAPEVLRGE---QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA-SATTAPS 231 (268)
T ss_pred ccccCC-ccccccccccceeCHhHhccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh-ccCCCCC
Confidence 321111 112334689999999988543 37889999999999999999999996543322111110110 1111112
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.++.++.++.+||.+||..+|.+||++.++++||||+
T Consensus 232 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 232 IPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 2346789999999999999999999999999999985
No 126
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.2e-40 Score=336.80 Aligned_cols=259 Identities=25% Similarity=0.423 Sum_probs=208.9
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
..+.|.+.+.||.|+||.||+|.+..++..||+|++..... ....+..|+.++..+ +||||++++++|...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--------EEEEIKQEINMLKKYSHHRNIATYYGAFIKK 75 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc--------cHHHHHHHHHHHHHhcCCCCeeeEeeEEeec
Confidence 35678889999999999999999999999999999854321 123567899999998 699999999998642
Q ss_pred -----CceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEE
Q 005678 480 -----QNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVT 552 (683)
Q Consensus 480 -----~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~ 552 (683)
...+|+||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||.||+++.++.++|+
T Consensus 76 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 76 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred CCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECCCCCEEEc
Confidence 24689999999999999999653 46899999999999999999999965 9999999999999999999999
Q ss_pred ecCCccccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Q 005678 553 DFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRE 630 (683)
Q Consensus 553 DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~ 630 (683)
|||++........ ......|++.|+|||++.... ...++.++|||||||++|+|++|..||...........
T Consensus 154 Dfg~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~- 227 (272)
T cd06637 154 DFGVSAQLDRTVG-----RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL- 227 (272)
T ss_pred cCCCceecccccc-----cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH-
Confidence 9999986543211 122346899999999986432 23488899999999999999999999976544332221
Q ss_pred HHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 631 DTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 631 ~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.............++..+.+||.+||..+|.+||++.+++.||||
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 228 ---IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ---HhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 111111222234678999999999999999999999999999997
No 127
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8e-40 Score=337.74 Aligned_cols=259 Identities=28% Similarity=0.452 Sum_probs=214.6
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||+|++...... .....+.+|+.+++.++||||++++++|. +...
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 73 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE------DEIEDIQQEIQFLSQCRSPYITKYYGSFL-KGSK 73 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc------hHHHHHHHHHHHHHHcCCCCeeeeeEEEE-ECCe
Confidence 3688899999999999999999999999999998543211 22456788999999999999999999886 6688
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+|+||+++++|.+++... .+++..+..++.|++.||.|||+.+ |+|+||+|+||++++++.++|+|||++.....
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 99999999999999999766 6899999999999999999999865 99999999999999999999999999987754
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
... ......|++.|+|||++.... ++.++|||||||++|+|++|..||.......... .+........+
T Consensus 151 ~~~-----~~~~~~~~~~y~~PE~~~~~~---~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~---~~~~~~~~~~~ 219 (274)
T cd06609 151 TMS-----KRNTFVGTPFWMAPEVIKQSG---YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF---LIPKNNPPSLE 219 (274)
T ss_pred ccc-----ccccccCCccccChhhhccCC---CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH---HhhhcCCCCCc
Confidence 321 123347889999999986544 8999999999999999999999997655433221 11122222222
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSKK 683 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K~ 683 (683)
. ..++..+.++|.+||..+|++||++.++++||||+.+++
T Consensus 220 ~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 220 G-NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred c-cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 2 127889999999999999999999999999999998864
No 128
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-39 Score=342.53 Aligned_cols=260 Identities=25% Similarity=0.419 Sum_probs=214.5
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
...+|.+.+.||.|+||.||+|.+..++..||+|.+...... ....+.+|+.+++.+.||||+++++.|. ..
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-------~~~~~~~e~~~l~~~~h~~v~~~~~~~~-~~ 89 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-------KKELIINEILVMRENKNPNIVNYLDSYL-VG 89 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-------hHHHHHHHHHHHHhCCCCCEeeEEEEEE-eC
Confidence 456899999999999999999999999999999987553321 1346788999999999999999999886 57
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..+|+||||+++++|..++... .+++..+..++.|++.||.|||..+ |+|+||||+|||++.++.++|+|||++...
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 90 DELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred CEEEEeecccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 7899999999999999998654 4899999999999999999999865 999999999999999999999999998765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......|++.|+|||++.... ++.++|||||||++|+|++|..||........+.. +.......
T Consensus 167 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~ 235 (296)
T cd06654 167 TPEQS-----KRSTMVGTPYWMAPEVVTRKA---YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL---IATNGTPE 235 (296)
T ss_pred ccccc-----ccCcccCCccccCHHHHcCCC---CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHH---HhcCCCCC
Confidence 43211 112336899999999886433 78899999999999999999999977665443322 11112222
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.+....++..+.+||.+||.++|.+||++.+++.||||..++
T Consensus 236 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 277 (296)
T cd06654 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277 (296)
T ss_pred CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccC
Confidence 233456889999999999999999999999999999998754
No 129
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-39 Score=344.56 Aligned_cols=260 Identities=28% Similarity=0.446 Sum_probs=209.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||+|+||.||++.+..++..||+|.+..... ......+.+|+.++..++||||++++++|. +.+.
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~ 73 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK------PAIRNQIIRELKVLHECNSPYIVGFYGAFY-SDGE 73 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC------HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-eCCE
Confidence 368999999999999999999999999999998754321 123456788999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|.+++...+.+++..+..++.|++.||.|||+. .+|+|+||||.|||++.++.++|+|||++..+..
T Consensus 74 ~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 74 ISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred EEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh-CCEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 999999999999999998878899999999999999999999973 2599999999999999999999999999876533
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH-----------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRED----------- 631 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~----------- 631 (683)
.. .....|++.|+|||++.+. .++.++|||||||++|+|++|..||.............
T Consensus 153 ~~-------~~~~~~~~~~~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (308)
T cd06615 153 SM-------ANSFVGTRSYMSPERLQGT---HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKES 222 (308)
T ss_pred cc-------cccCCCCcCccChhHhcCC---CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCC
Confidence 21 2234789999999987543 37889999999999999999999996543222110000
Q ss_pred ----------------------HHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 632 ----------------------TIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 632 ----------------------~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.+........| ...++.++.+||.+||..+|++||++.++++||||...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 223 HRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cccccCCCCCccchhhHHHHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000001111 12367899999999999999999999999999999764
No 130
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.3e-39 Score=335.35 Aligned_cols=266 Identities=27% Similarity=0.488 Sum_probs=214.0
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCccc---chhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQW---SEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~---~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+|.+.+.||.|+||.||+|.+..++..||||.+...... .........+.+..|+.+++.++||||+++++++. ..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET-TE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec-cC
Confidence 688899999999999999999889999999987543221 11222334567889999999999999999999886 67
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
+.+++||||+++++|.+++...+.+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG--ILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 789999999999999999988788999999999999999999999855 999999999999999999999999999765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
...... .......|+..|+|||.+.... ..++.++|+||||+++|+|++|..||........+.... .......
T Consensus 159 ~~~~~~---~~~~~~~~~~~y~~PE~~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~ 232 (272)
T cd06629 159 DDIYDN---DQNMSMQGSVFWMAPEVIHSYS-QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLG--NKRSAPP 232 (272)
T ss_pred cccccc---cccccccCCccccCHHHhcccc-CCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhh--ccccCCc
Confidence 432111 1122346889999999876433 236889999999999999999999997655544332211 1111222
Q ss_pred CCC--CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 641 FPS--RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 641 ~p~--~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
++. .+.++..+.+||.+||.++|.+||++.++++||||
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 233 IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 222 24678999999999999999999999999999997
No 131
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.7e-40 Score=339.53 Aligned_cols=262 Identities=27% Similarity=0.449 Sum_probs=211.3
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+++.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.++..++||||++++++|. ..+.
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~ 73 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD------ESKFNQIIMELDILHKAVSPYIVDFYGAFF-IEGA 73 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHhcCCCcHHhhhhhee-cCCe
Confidence 368889999999999999999988999999998754321 122457889999999999999999999886 5778
Q ss_pred EEEEEecccCCChhHHHhcC---CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT---PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~---~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
+++||||+++++|..++... ..+++..+..++.+++.||.|||+. .+|+|+||||+|||++.++.++|+|||++..
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 152 (286)
T cd06622 74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE-HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGN 152 (286)
T ss_pred EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc-CCEeeCCCCHHHEEECCCCCEEEeecCCccc
Confidence 99999999999999998663 3689999999999999999999963 2599999999999999999999999999876
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSK---TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~---~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
+... ......|++.|+|||++.... ...++.++|||||||++|+|++|..||..............+...
T Consensus 153 ~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 225 (286)
T cd06622 153 LVAS-------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDG 225 (286)
T ss_pred ccCC-------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhc
Confidence 5332 123346889999999885432 124688999999999999999999999765443322111111222
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
....+ ++.++.++.+||.+||..+|.+||++.+++.||||...
T Consensus 226 ~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 226 DPPTL--PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred CCCCC--CcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 22222 34589999999999999999999999999999998653
No 132
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.3e-39 Score=330.72 Aligned_cols=264 Identities=29% Similarity=0.501 Sum_probs=218.1
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||+|.+..++..|++|.+...... ......+..|+.+++.++||||+++++.+. +.+.+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~ 74 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-----PKTIKEIADEMKVLELLKHPNLVKYYGVEV-HREKV 74 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-----hHHHHHHHHHHHHHHhCCCCChhheeeeEe-cCCEE
Confidence 688999999999999999999889999999998655332 344678999999999999999999999875 67889
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
++|+||+++++|.+++.....+++..+..++.+++.||.|||+.+ |+|+||+|.||+++.++.+||+|||++......
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred EEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 999999999999999988777899999999999999999999865 999999999999999999999999999876544
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
..... .......|++.|+|||++.......++.++||||||+++|+|++|..||........... .+.......+|.
T Consensus 153 ~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~ 229 (264)
T cd06626 153 TTTMG-EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMF--HVGAGHKPPIPD 229 (264)
T ss_pred CCccc-ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHH--HHhcCCCCCCCc
Confidence 22111 112234688999999998754433478899999999999999999999975543322221 112223344555
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
...++..+.+||.+||..+|.+||++.+++.||||
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 230 SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 55668999999999999999999999999999997
No 133
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.8e-39 Score=339.06 Aligned_cols=254 Identities=32% Similarity=0.476 Sum_probs=213.3
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||++.+..++..||||++..... ........+.+|+.+++.+.||||+++++++. +.+.
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI----VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-DDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh----hhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-cCCe
Confidence 368999999999999999999999999999998754321 12234567889999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|.+++.....+++..+..++.||+.||.|||+.+ |+|+||+|.|||++.+|.+||+|||++.....
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 9999999999999999988888999999999999999999999955 99999999999999999999999999987643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
. .....|++.|+|||.+.... ++.++||||||+++|+|++|..||......... . .+ ..... +
T Consensus 154 ~--------~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~--~~-~~~~~--~ 216 (290)
T cd05580 154 R--------TYTLCGTPEYLAPEIILSKG---YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIY-E--KI-LEGKV--R 216 (290)
T ss_pred C--------CCCCCCCccccChhhhcCCC---CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH-H--HH-hcCCc--c
Confidence 3 22336899999999886443 688999999999999999999999766532211 1 11 12222 2
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTY 680 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~ 680 (683)
.+..++..++++|.+||..+|.+|| ++.++++||||..
T Consensus 217 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 217 FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence 3346789999999999999999999 8999999999865
No 134
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.1e-39 Score=342.21 Aligned_cols=266 Identities=29% Similarity=0.490 Sum_probs=217.1
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||||.+....... ......+..|+.++..++||||+++++.+. +...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK----RNKVKRVLTEQEILATLDHPFLPTLYASFQ-TETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccch----HHHHHHHHHHHHHHHhCCCCCchhheeeee-cCCE
Confidence 36899999999999999999999899999999886542211 224567889999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
+|+||||+.+++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++...
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 153 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHESGHIMLSDFDLSKQS 153 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence 99999999999999999653 56899999999999999999999865 999999999999999999999999998765
Q ss_pred ccCcCCCc------------------------ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCC
Q 005678 561 EDDVGSQG------------------------MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRR 616 (683)
Q Consensus 561 ~~~~~~~~------------------------~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~ 616 (683)
........ ........||..|+|||++.... ++.++|||||||++|+|++|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Di~slG~ll~~l~~g~~ 230 (316)
T cd05574 154 DVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG---HGSAVDWWTLGILLYEMLYGTT 230 (316)
T ss_pred cccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC---CCchHHHHHHHHHHHHHhhCCC
Confidence 43211000 00112336899999999986433 7889999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCC----HHHHhcCcccCCCC
Q 005678 617 PFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPD----VLTLAQDPYLTYSK 682 (683)
Q Consensus 617 PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS----~~eLl~hP~l~~~K 682 (683)
||........... .......++....++..+.+||.+||..+|.+||+ +.+++.||||+..+
T Consensus 231 pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~ 296 (316)
T cd05574 231 PFKGSNRDETFSN----ILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN 296 (316)
T ss_pred CCCCCchHHHHHH----HhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence 9977665443322 12233445544457999999999999999999999 99999999998753
No 135
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.2e-39 Score=338.24 Aligned_cols=260 Identities=30% Similarity=0.461 Sum_probs=211.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
-|.+.+.||.|+||.||+|.+..++..+++|.+.... ......+.+|+.+++.++||||++++++|. ..+.+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-~~~~~ 77 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-------EEELEDYMVEIDILASCDHPNIVKLLDAFY-YENNL 77 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-------HHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-eCCEE
Confidence 3677889999999999999999999999999874431 123467888999999999999999999886 67789
Q ss_pred EEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
++||||+++++|..++.. ...+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++.....
T Consensus 78 ~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~ 155 (282)
T cd06643 78 WILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 155 (282)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEccCCCEEEccccccccccc
Confidence 999999999999988753 457999999999999999999999965 99999999999999999999999999876533
Q ss_pred CcCCCcccccccCCCCCccCCccccccc--CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELS--KTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~--~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
.. .......||+.|+|||++... ....++.++|||||||++|+|++|.+||........... +.......
T Consensus 156 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~~~~~~ 227 (282)
T cd06643 156 TI-----QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKSEPPT 227 (282)
T ss_pred cc-----cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHH---HhhcCCCC
Confidence 21 112234689999999997432 233478899999999999999999999976654443322 11222222
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.+.+..++..+.+||.+||..+|.+||++.++++||||...
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 228 LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 33344688999999999999999999999999999999864
No 136
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.6e-39 Score=339.39 Aligned_cols=264 Identities=27% Similarity=0.402 Sum_probs=214.3
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
..++.|++++.||.|+||.||+|.+..++..|++|++.... ......+.+|+.+++.++||||++++++|. .
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~ 80 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-------EEELEDYMVEIEILATCNHPYIVKLLGAFY-W 80 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-------HHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-e
Confidence 34578999999999999999999999999999999975431 123567888999999999999999999986 5
Q ss_pred CceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
.+.+|+||||+++++|..++.. ...+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 81 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcCCCCEEEccCccce
Confidence 6789999999999999988743 456899999999999999999999865 9999999999999999999999999987
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
....... ......|++.|+|||++.... ...++.++|||||||++|+|++|..||........... +...
T Consensus 159 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~ 230 (292)
T cd06644 159 KNVKTLQ-----RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKS 230 (292)
T ss_pred ecccccc-----ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHH---HhcC
Confidence 5432211 112336889999999885322 23478899999999999999999999976554332221 1222
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.....+....++.++.+||.+||..+|++||++.++++||||...
T Consensus 231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 231 EPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred CCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 222333345688999999999999999999999999999999753
No 137
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.2e-40 Score=353.92 Aligned_cols=253 Identities=27% Similarity=0.389 Sum_probs=196.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
...|.+++.||+|+||.||+|.+..++..||+|+.... ....|+.+++.++||||++++++|. ...
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------------~~~~E~~~l~~l~h~~iv~~~~~~~-~~~ 130 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------------TTLIEAMLLQNVNHPSVIRMKDTLV-SGA 130 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------------ccHHHHHHHHhCCCCCCcChhheEE-eCC
Confidence 45799999999999999999999999999999975322 2245899999999999999999986 667
Q ss_pred eEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..|+||||+. ++|..++. ....+++..+..|+.||+.||.|||..+ ||||||||.|||++.++.+||+|||++...
T Consensus 131 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 131 ITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR--IIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred eeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 8899999995 57888774 4567999999999999999999999965 999999999999999999999999999754
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCchH-H--------HHHHH
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRP-FGHDQTQ-E--------RILRE 630 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~P-F~~~~~~-e--------~il~~ 630 (683)
.... ......||+.|+|||++.... ++.++|||||||++|+|+++..| |...... . .+...
T Consensus 208 ~~~~------~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~ 278 (357)
T PHA03209 208 VVAP------AFLGLAGTVETNAPEVLARDK---YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKI 278 (357)
T ss_pred ccCc------ccccccccccccCCeecCCCC---CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHH
Confidence 3221 122346999999999986443 89999999999999999985544 4332111 0 00000
Q ss_pred HHHHHhhccCCC----------------------------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 631 DTIIKARKVEFP----------------------------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 631 ~~i~~~~~~~~p----------------------------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..........++ ....++.++.+||.+||.+||.+|||+.++++||||+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 279 ISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 000000011111 01245677888999999999999999999999999985
No 138
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.8e-40 Score=349.06 Aligned_cols=267 Identities=18% Similarity=0.262 Sum_probs=204.6
Q ss_pred EEEEeccc--CceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 407 LLNLLGKG--GFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 407 l~~~LGkG--gfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
++.+||+| +||+||++.+..+|..||+|.+...... ......+.+|+.+++.++||||++++++|. ..+.+|
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-~~~~~~ 75 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-----NEMVTFLQGELHVSKLFNHPNIVPYRATFI-ADNELW 75 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-----HHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-ECCEEE
Confidence 46789999 7899999999999999999998554321 122456778999999999999999999986 667899
Q ss_pred EEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 485 TVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+||||+++++|.+++..+ ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++++|||.+.....
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~ 153 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMIN 153 (327)
T ss_pred EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEecCCcEEEcccchhhcccc
Confidence 999999999999999643 45899999999999999999999865 99999999999999999999999987654322
Q ss_pred CcCCC--cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh----
Q 005678 563 DVGSQ--GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA---- 636 (683)
Q Consensus 563 ~~~~~--~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~---- 636 (683)
..... .........++..|+|||++.... ..++.++|||||||++|+|++|..||..................
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (327)
T cd08227 154 HGQRLRVVHDFPKYSVKVLPWLSPEVLQQNL-QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 232 (327)
T ss_pred ccccccccccccccccceecccChHHhhccc-CCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccc
Confidence 11100 011122346788899999986432 23789999999999999999999999765443322211000000
Q ss_pred ------hc------------------------------cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 637 ------RK------------------------------VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 637 ------~~------------------------------~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.. ...+....+++.+.+||.+||.+||.+|||+.++++||||+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 00 000111235778999999999999999999999999999987
Q ss_pred CC
Q 005678 681 SK 682 (683)
Q Consensus 681 ~K 682 (683)
.|
T Consensus 313 ~~ 314 (327)
T cd08227 313 IK 314 (327)
T ss_pred cc
Confidence 65
No 139
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.3e-39 Score=343.88 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=191.3
Q ss_pred EEEecccCceEEEEEEEc--cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc-CCceEE
Q 005678 408 LNLLGKGGFSEVYKAYDL--VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI-DQNTFC 484 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~--~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~-d~~~~~ 484 (683)
...||+|+||+||+|.+. .++..||+|.+..... ...+.+|+.+++.++||||++++++|.. ....+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 76 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---------SMSACREIALLRELKHPNVISLQKVFLSHADRKVW 76 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEE
Confidence 467999999999999865 4678999998754321 1246789999999999999999998853 345789
Q ss_pred EEEecccCCChhHHHhcC---------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEe----CCCCcEEE
Q 005678 485 TVLEYCSGKDLDAVLKAT---------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLF----DEFGVAKV 551 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~---------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILL----d~~g~vKL 551 (683)
+||||++ ++|..++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||
T Consensus 77 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~~~~~~~~~~kl 153 (317)
T cd07868 77 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKI 153 (317)
T ss_pred EEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEecCCCCcCcEEE
Confidence 9999995 5888877422 25899999999999999999999865 9999999999999 45679999
Q ss_pred EecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchH-------
Q 005678 552 TDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQ------- 624 (683)
Q Consensus 552 ~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~------- 624 (683)
+|||++........ .........||+.|+|||++... ..++.++|||||||++|+|++|.+||......
T Consensus 154 ~DfG~a~~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~ 229 (317)
T cd07868 154 ADMGFARLFNSPLK--PLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 229 (317)
T ss_pred eecCceeccCCCCc--cccccCCccccccccCCHHHcCC--CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccc
Confidence 99999987653321 11122345789999999988642 23788999999999999999999999643321
Q ss_pred --HH---HHHH---------HHHH----------HhhccCCC----------CCcCCCHHHHHHHHHhcccCCCCCCCHH
Q 005678 625 --ER---ILRE---------DTII----------KARKVEFP----------SRPAVSNEAKDLIRRCLTYNQAERPDVL 670 (683)
Q Consensus 625 --e~---il~~---------~~i~----------~~~~~~~p----------~~~~~s~el~dLI~rCL~~dP~kRPS~~ 670 (683)
.. ++.. ..+. ......+. .....+..+.+||.+||.+||.+|||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~ 309 (317)
T cd07868 230 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE 309 (317)
T ss_pred cHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHH
Confidence 00 0000 0000 00000000 0112356789999999999999999999
Q ss_pred HHhcCccc
Q 005678 671 TLAQDPYL 678 (683)
Q Consensus 671 eLl~hP~l 678 (683)
++++||||
T Consensus 310 e~l~hp~f 317 (317)
T cd07868 310 QAMQDPYF 317 (317)
T ss_pred HHhcCCCC
Confidence 99999998
No 140
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-39 Score=340.17 Aligned_cols=260 Identities=27% Similarity=0.443 Sum_probs=215.2
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
...+|.+.+.||.|+||.||+|.+..++..|+||.+..... .....+.+|+.+++.++||||++++++|. +.
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 88 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-------PKKELIINEILVMKELKNPNIVNFLDSFL-VG 88 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-------chHHHHHHHHHHHHhcCCCceeeeeeeEe-cC
Confidence 44679999999999999999999999999999998754321 11346788999999999999999999986 67
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
+.+|+|+||+++++|..++... .+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~~~~~kl~dfg~~~~~ 165 (296)
T cd06655 89 DELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMDGSVKLTDFGFCAQI 165 (296)
T ss_pred ceEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccchhc
Confidence 7899999999999999998755 4899999999999999999999965 999999999999999999999999998765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......|++.|+|||.+.... ++.++|||||||++|+|++|..||........... +.......
T Consensus 166 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~---~~~~~~~~ 234 (296)
T cd06655 166 TPEQS-----KRSTMVGTPYWMAPEVVTRKA---YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGTPE 234 (296)
T ss_pred ccccc-----cCCCcCCCccccCcchhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCcc
Confidence 43211 112336899999999886443 78899999999999999999999987665443322 11122222
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
+..+..++..+.+||.+||..+|.+||++.+++.||||..++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 235 LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 333456889999999999999999999999999999998754
No 141
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=358.88 Aligned_cols=262 Identities=27% Similarity=0.434 Sum_probs=201.6
Q ss_pred CccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecc
Q 005678 395 FNNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWD 474 (683)
Q Consensus 395 f~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~ 474 (683)
+.++...++.|.-.+.||+||||.||+|. ..+|..||||.+....... .++|.+|+.++.+++|||+|+|+|
T Consensus 67 ~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~-l~~~~~vAVK~~~~~~~~~-------~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 67 YDELRKATNNFSESNLIGEGGFGTVYKGV-LSDGTVVAVKRLSSNSGQG-------EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred HHHHHHHHhCCchhcceecCCCeEEEEEE-ECCCCEEEEEEecCCCCcc-------hhHHHHHHHHHhcCCCcCcccEEE
Confidence 34445567889889999999999999997 4556999999765432211 345999999999999999999999
Q ss_pred ccccCCc-eEEEEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcC-CceEecccCCcceEeCCCCcEE
Q 005678 475 TFEIDQN-TFCTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRA-QKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 475 ~f~~d~~-~~~LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g-~~IIHrDLKP~NILLd~~g~vK 550 (683)
+|. +.+ ..+||||||++|+|.++|.... +++|..+..|+.++|.||.|||... ++||||||||+|||||+++.+|
T Consensus 139 yC~-e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 139 YCL-EGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEe-cCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 996 555 5999999999999999996554 8999999999999999999999964 3799999999999999999999
Q ss_pred EEecCCcccccc-CcCCCcccccccC-CCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCc--hHHH
Q 005678 551 VTDFGLSKIVED-DVGSQGMELTSQG-AGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQ--TQER 626 (683)
Q Consensus 551 L~DFGls~~~~~-~~~~~~~~l~~~~-~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~--~~e~ 626 (683)
|+|||+|+..+. ... .... .||.+|+|||++..+. ++.|+|||||||+|+||++|+.|..... ....
T Consensus 218 lsDFGLa~~~~~~~~~------~~~~~~gt~gY~~PEy~~~g~---lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~ 288 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTS------VSTTVMGTFGYLAPEYASTGK---LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELS 288 (361)
T ss_pred ccCccCcccCCccccc------eeeecCCCCccCChhhhccCC---cCcccccccchHHHHHHHhCCcccCCCCCccccc
Confidence 999999976654 211 1111 7999999999987544 8999999999999999999999887543 1111
Q ss_pred HHH--HHHHHHhhccCCCCC----cCCC-----HHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 627 ILR--EDTIIKARKVEFPSR----PAVS-----NEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 627 il~--~~~i~~~~~~~~p~~----~~~s-----~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
+.. ...+.......+.++ ...+ ..+..+..+|+..+|..||++.+++.
T Consensus 289 l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 289 LVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 111 111111111111110 1122 23567888999999999999998754
No 142
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.2e-39 Score=330.76 Aligned_cols=263 Identities=27% Similarity=0.418 Sum_probs=209.9
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-Cc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-QN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-~~ 481 (683)
..|.+.+.||+|+||.||.|.+..++..||||.+........ ....+..+.+|+.+++.+.||||++++++|... ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 79 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPE--TSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMER 79 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcc--cHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCc
Confidence 468899999999999999999999999999998754322211 122356788999999999999999999988643 35
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++||||+++++|.+++.....+++..+..++.+++.||.|||+.+ |+|+||||.|||++.++.++|+|||++....
T Consensus 80 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 80 TLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 78899999999999999988777899999999999999999999865 9999999999999999999999999987654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
...... .......|+..|+|||++.... ++.++|||||||++|+|++|+.||........+.. .. ......
T Consensus 158 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---~~-~~~~~~ 228 (265)
T cd06652 158 TICLSG--TGMKSVTGTPYWMSPEVISGEG---YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK---IA-TQPTNP 228 (265)
T ss_pred cccccc--cccccCCCCccccChhhhcCCC---CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH---Hh-cCCCCC
Confidence 221100 1122336889999999986433 78899999999999999999999976544333221 11 111111
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
..++.++..+.++|.+||. +|..||++.++++|||+.
T Consensus 229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 1234678889999999994 999999999999999984
No 143
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.6e-40 Score=357.91 Aligned_cols=261 Identities=25% Similarity=0.375 Sum_probs=205.0
Q ss_pred cccccceeEEEEecccCceEEEEEEEc--cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDL--VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~--~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
.++..+|.++..||.|+||.||+|... .++..||+|.+... ....+|+.+++.++|||||+++++|
T Consensus 88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------------~~~~~E~~il~~l~h~~iv~~~~~~ 155 (392)
T PHA03207 88 SVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------------KTPGREIDILKTISHRAIINLIHAY 155 (392)
T ss_pred hhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------------ccHHHHHHHHHhcCCCCccceeeeE
Confidence 456778999999999999999999753 45688999986432 1245799999999999999999998
Q ss_pred ccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
. ....+|+|||++. ++|..++.....+++..+..|+.||+.||.|||..+ ||||||||+|||++.++.++|+|||+
T Consensus 156 ~-~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g--ivHrDlkp~Nill~~~~~~~l~DfG~ 231 (392)
T PHA03207 156 R-WKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG--IIHRDVKTENIFLDEPENAVLGDFGA 231 (392)
T ss_pred e-eCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEccCcc
Confidence 6 5678999999994 688888877778999999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchH---HHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQ---ERILREDTI 633 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~---e~il~~~~i 633 (683)
+..+...... .......||+.|+|||++.... ++.++|||||||++|+|++|+.||...... ..+......
T Consensus 232 a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~ 305 (392)
T PHA03207 232 ACKLDAHPDT---PQCYGWSGTLETNSPELLALDP---YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRC 305 (392)
T ss_pred ccccCccccc---ccccccccccCccCHhHhcCCC---CCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHH
Confidence 9766443211 1122347999999999986443 889999999999999999999999654321 111110000
Q ss_pred HHhhccCCC-----------------------C-----CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 634 IKARKVEFP-----------------------S-----RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 634 ~~~~~~~~p-----------------------~-----~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.......++ . ...++.++.+||.+||.++|.+||++.+++.||||...
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 306 MQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred hccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 000001111 0 12346789999999999999999999999999999753
No 144
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.8e-39 Score=331.52 Aligned_cols=261 Identities=24% Similarity=0.402 Sum_probs=212.6
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||.|+||+||+|....++..||+|++....... ....+.+|+.+++.++||||+++++.+. ..+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~ 73 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT------SVDELRKEVQAMSQCNHPNVVKYYTSFV-VGDE 73 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch------HHHHHHHHHHHHHhcCCCCEEEEEEEEe-eCCE
Confidence 46899999999999999999988899999999885432211 3567889999999999999999999886 6788
Q ss_pred EEEEEecccCCChhHHHhcC---CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT---PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~---~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
+++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||++++++.++|+|||++..
T Consensus 74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~~~~~~l~df~~~~~ 151 (267)
T cd06610 74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGEDGSVKIADFGVSAS 151 (267)
T ss_pred EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEcccchHHH
Confidence 99999999999999999653 45899999999999999999999865 99999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
+....... ........|++.|+|||++... ..++.++|+|||||++|+|++|..||........... .......
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~---~~~~~~~ 225 (267)
T cd06610 152 LADGGDRT-RKVRKTFVGTPCWMAPEVMEQV--HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLML---TLQNDPP 225 (267)
T ss_pred hccCcccc-ccccccccCChhhcChHHHccc--cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHH---HhcCCCC
Confidence 76542211 0122334689999999988654 2378899999999999999999999976655432222 1111112
Q ss_pred CCCCC---cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 640 EFPSR---PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 640 ~~p~~---~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.++.. ..++..+.+||.+||..+|.+||++.+++.||||
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 22221 3678999999999999999999999999999997
No 145
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=361.42 Aligned_cols=257 Identities=30% Similarity=0.508 Sum_probs=224.9
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|..++.+|+|+||.++++..+..+..|++|.+.......... +.+..|+.+++++.|||||.+++.|..++..
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r-----~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER-----RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh-----HHHHHHHHHHHhccCCCeeeeccchhcCCce
Confidence 56889999999999999999999999999999988776654432 3788999999999999999999999866666
Q ss_pred EEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
+||||+||+||+|...|++. ..++++.+..++.|++.|+.|||+. .|+|||||+.|||++.++.|+|+|||+|+.+
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~--~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN--RVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh--hhhcccchhhhhhccccCceeecchhhhhhc
Confidence 99999999999999999543 4689999999999999999999974 5999999999999999999999999999998
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
.... .+..+.+|||.||+||.+.... |..|+|||||||++|||++-+++|.......-+.... ...-
T Consensus 157 ~~~~-----~~a~tvvGTp~YmcPEil~d~p---Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~-----~~~~ 223 (426)
T KOG0589|consen 157 NPED-----SLASTVVGTPYYMCPEILSDIP---YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKIN-----RGLY 223 (426)
T ss_pred CCch-----hhhheecCCCcccCHHHhCCCC---CCccCcchhhcchHHHHHhcccccCccchHHHHHHHh-----hccC
Confidence 7653 3566779999999999997555 9999999999999999999999998887766554322 1224
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.|.+...+.++..+|..||..+|..||++.+||.+|.++
T Consensus 224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 566678999999999999999999999999999999876
No 146
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.6e-39 Score=340.09 Aligned_cols=258 Identities=23% Similarity=0.393 Sum_probs=201.6
Q ss_pred cccceeEEEEecccCceEEEEEEEcc----------------CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLV----------------EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL 464 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~----------------~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L 464 (683)
..++|.+.+.||+|+||.||+|.+.. ++..||||++..... ......+.+|+.++..+
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l 76 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN------KNARNDFLKEVKILSRL 76 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC------HHHHHHHHHHHHHHhhc
Confidence 45689999999999999999997532 345799998865321 12345788999999999
Q ss_pred CCCceeeeccccccCCceEEEEEecccCCChhHHHhcC-------------------CCcchHHHHHHHHHHHHHHHHHH
Q 005678 465 VHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT-------------------PVLPEREARIIIVQIFQGLIYLN 525 (683)
Q Consensus 465 ~HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~-------------------~~Lse~~~~~I~~qIa~aL~yLH 525 (683)
+||||++++++|. +.+.+|+||||+++++|.+++... ..+++..+..++.||+.||.|||
T Consensus 77 ~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 155 (304)
T cd05096 77 KDPNIIRLLGVCV-DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS 155 (304)
T ss_pred CCCCeeEEEEEEe-cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999986 567899999999999999998543 23677889999999999999999
Q ss_pred hcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHH
Q 005678 526 KRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAG 605 (683)
Q Consensus 526 ~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLG 605 (683)
+.+ |+||||||+|||++.++.+||+|||+++.+..... ........+++.|+|||++.... ++.++||||||
T Consensus 156 ~~~--ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG 227 (304)
T cd05096 156 SLN--FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY---YRIQGRAVLPIRWMAWECILMGK---FTTASDVWAFG 227 (304)
T ss_pred HCC--ccccCcchhheEEcCCccEEECCCccceecccCce---eEecCcCCCCccccCHHHHhcCC---CCchhhhHHHH
Confidence 965 99999999999999999999999999986543211 11223345688899999986443 89999999999
Q ss_pred HHHHHHHc--CCCCCCCCchHHHHHHHHHHHHh--hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 606 ILFYQMLF--GRRPFGHDQTQERILREDTIIKA--RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 606 vILyELLt--G~~PF~~~~~~e~il~~~~i~~~--~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
|++|+|++ +..||........+......... .......++.++..+.+||.+||..+|.+|||+.++.
T Consensus 228 ~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 228 VTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred HHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 99999986 66788766554433221111111 1111223457899999999999999999999999994
No 147
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-39 Score=341.60 Aligned_cols=260 Identities=26% Similarity=0.428 Sum_probs=212.9
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
...+|.+++.||.|+||.||+|.+..++..||+|.+...... ....+.+|+.+++.++||||++++++|. ..
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~ 88 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-------KKELIINEILVMRENKNPNIVNYLDSYL-VG 88 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-------hHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence 457899999999999999999999999999999988543221 1245788999999999999999999986 67
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
+.+|+||||+++++|..++... .+++..+..++.+++.||.|||+.+ |+|+||||+|||++.++.++|+|||++...
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~ 165 (297)
T cd06656 89 DELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (297)
T ss_pred CEEEEeecccCCCCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEECcCccceEc
Confidence 7899999999999999998654 4899999999999999999999865 999999999999999999999999998765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......|++.|+|||.+.... ++.++|||||||++|+|++|..||........... +.......
T Consensus 166 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~---~~~~~~~~ 234 (297)
T cd06656 166 TPEQS-----KRSTMVGTPYWMAPEVVTRKA---YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGTPE 234 (297)
T ss_pred cCCcc-----CcCcccCCccccCHHHHcCCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee---eccCCCCC
Confidence 43221 112236899999999886433 78899999999999999999999976554332211 11111222
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
...+..++..+.+||.+||..+|.+||++.++++||||..++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 235 LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 223346788999999999999999999999999999998654
No 148
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.2e-39 Score=337.52 Aligned_cols=262 Identities=25% Similarity=0.458 Sum_probs=214.9
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.++|.+++.||.|+||.||+|.+..++..||+|++.... ......+.+|+.+++.++||||+++++.|. +..
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~ 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-------EEELEDFMVEIDILSECKHPNIVGLYEAYF-YEN 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-------HHHHHHHHHHHHHHHhCCCCceeEEEEEEe-cCC
Confidence 356889999999999999999988899999999875431 123467888999999999999999999986 677
Q ss_pred eEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+|+||||+++++|..++.. ...+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++...
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTLDGDVKLADFGVSAKN 153 (280)
T ss_pred eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECCCCCEEEccCccchhh
Confidence 89999999999999999865 356999999999999999999999965 999999999999999999999999998765
Q ss_pred ccCcCCCcccccccCCCCCccCCccccccc--CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELS--KTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~--~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
..... ......|++.|+|||++... ....++.++|||||||++|+|++|..||........+.. +.....
T Consensus 154 ~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~ 225 (280)
T cd06611 154 KSTLQ-----KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLK---ILKSEP 225 (280)
T ss_pred ccccc-----ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHH---HhcCCC
Confidence 43211 12234689999999987532 223478899999999999999999999977654433321 122222
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
..+..+..++.++.+||.+||..+|.+||++.++++||||...
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 226 PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 2333345688999999999999999999999999999999864
No 149
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=338.67 Aligned_cols=246 Identities=18% Similarity=0.232 Sum_probs=200.4
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc--C-CceEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI--D-QNTFCT 485 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~--d-~~~~~L 485 (683)
..||+|++|.||+|.+ +|+.||||.+..... .....++.+.+|+.++.+++|||||+++++|.. + ...+++
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~----~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~l 99 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHK----GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSL 99 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEecccccc----ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEE
Confidence 5799999999999964 799999999865422 122335678899999999999999999998853 2 357899
Q ss_pred EEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcC
Q 005678 486 VLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVG 565 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~ 565 (683)
||||+++|+|.+++.....+++.....++.+++.||.|||.. .+++||||||.|||++.++.+||+|||+++.+....
T Consensus 100 v~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 100 ILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY-TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred EEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc-CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 999999999999998888899999999999999999999974 248899999999999999999999999998654321
Q ss_pred CCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCc
Q 005678 566 SQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRP 645 (683)
Q Consensus 566 ~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~ 645 (683)
....||+.|+|||++.... ..++.++|||||||++|+|++|..||......+.. . . .......++.+.
T Consensus 178 -------~~~~~~~~y~aPE~~~~~~-~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~-~--~-i~~~~~~~~~~~ 245 (283)
T PHA02988 178 -------FKNVNFMVYFSYKMLNDIF-SEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY-D--L-IINKNNSLKLPL 245 (283)
T ss_pred -------ccccCcccccCHHHhhhcc-ccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH-H--H-HHhcCCCCCCCC
Confidence 1236899999999986421 34899999999999999999999999876544322 1 1 111222333334
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 646 AVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 646 ~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.++..+++||.+||..||.+|||+.+++.
T Consensus 246 ~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 246 DCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred cCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 68999999999999999999999999985
No 150
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4e-39 Score=328.56 Aligned_cols=260 Identities=25% Similarity=0.433 Sum_probs=212.7
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.++|.+.+.||.|+||.||+|.+..++..+++|++..... .....+.+|+.+++.++||||+++++++. +.+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~ 73 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG-------DDFEIIQQEISMLKECRHPNIVAYFGSYL-RRD 73 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch-------hhHHHHHHHHHHHHhCCCCChhceEEEEE-eCC
Confidence 3679999999999999999999988999999999865422 13467889999999999999999999885 678
Q ss_pred eEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+|++|||+++++|..++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++...
T Consensus 74 ~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 151 (262)
T cd06613 74 KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTEDGDVKLADFGVSAQL 151 (262)
T ss_pred EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECCCCCEEECccccchhh
Confidence 899999999999999999765 67999999999999999999999865 999999999999999999999999999766
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......|+..|+|||.+.....+.++.++|||||||++|+|++|..||.............. .......
T Consensus 152 ~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~-~~~~~~~ 225 (262)
T cd06613 152 TATIA-----KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK-SNFPPPK 225 (262)
T ss_pred hhhhh-----ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-ccCCCcc
Confidence 43211 11223688999999998655333578899999999999999999999977665443322110 0001111
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPY 677 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~ 677 (683)
......++.++.+||.+||..+|..||++.+++.|||
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 226 LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 1223456788999999999999999999999999998
No 151
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.5e-39 Score=335.23 Aligned_cols=261 Identities=26% Similarity=0.436 Sum_probs=209.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||+|++....... .....+.+|+.++..++||||++++++|. +...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 74 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-----MVKKIAMREIRMLKQLRHENLVNLIEVFR-RKKR 74 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-----hhhHHHHHHHHHHHhcCCcchhhHHHhcc-cCCe
Confidence 46899999999999999999998899999999875433221 12346778999999999999999999996 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|..+......+++..+..++.||+.||.|||+.+ |+|+||+|+||++++++.++|+|||++..+..
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 75 LYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred EEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9999999999999988876667999999999999999999999865 99999999999999999999999999987643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA------ 636 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~------ 636 (683)
... ......|+.+|+|||++... ..++.++|||||||++|+|++|.+||......+...........
T Consensus 153 ~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (286)
T cd07846 153 PGE-----VYTDYVATRWYRAPELLVGD--TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQ 225 (286)
T ss_pred Ccc-----ccCcccceeeccCcHHhccc--cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhH
Confidence 321 12234688999999988532 33678999999999999999999999765543322211100000
Q ss_pred ---------hccCCC----------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 637 ---------RKVEFP----------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 637 ---------~~~~~p----------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....+ ..+.++..+.+||.+||..+|.+||++.+++.||||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 226 EIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000111 124678899999999999999999999999999998
No 152
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3e-39 Score=335.11 Aligned_cols=266 Identities=25% Similarity=0.412 Sum_probs=212.1
Q ss_pred CccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeec
Q 005678 395 FNNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLW 473 (683)
Q Consensus 395 f~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~ 473 (683)
|..+....++|.+++.||+|+||.||+|.+..++..||+|++..... ....+.+|+.++..+ +||||++++
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--------~~~~~~~e~~~l~~l~~h~~i~~~~ 81 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD--------IDEEIEAEYNILKALSDHPNVVKFY 81 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc--------hHHHHHHHHHHHHHHhcCCCeeeee
Confidence 44556688999999999999999999999999999999998643211 123566799999999 699999999
Q ss_pred cccc----cCCceEEEEEecccCCChhHHHh----cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC
Q 005678 474 DTFE----IDQNTFCTVLEYCSGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE 545 (683)
Q Consensus 474 ~~f~----~d~~~~~LV~Ey~~ggsL~~~L~----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~ 545 (683)
++|. .+++.+++||||+++++|..++. ....+++..+..++.|++.||.|||+.+ |+|+||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~ 159 (286)
T cd06638 82 GMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTT 159 (286)
T ss_pred eeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECC
Confidence 9873 24567999999999999998874 3356889999999999999999999865 999999999999999
Q ss_pred CCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCch
Q 005678 546 FGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQT 623 (683)
Q Consensus 546 ~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~ 623 (683)
++.++|+|||++..+..... ......|++.|+|||++.... ...++.++|||||||++|+|++|..||.....
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~ 234 (286)
T cd06638 160 EGGVKLVDFGVSAQLTSTRL-----RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP 234 (286)
T ss_pred CCCEEEccCCceeecccCCC-----ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch
Confidence 99999999999986643211 112336899999999885321 23478899999999999999999999976654
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 624 QERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 624 ~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
...+... ..........+..++..+.+||.+||..+|++||++.++++||||
T Consensus 235 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 235 MRALFKI---PRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred hHHHhhc---cccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 4333211 111111222234568899999999999999999999999999997
No 153
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.5e-39 Score=326.95 Aligned_cols=258 Identities=28% Similarity=0.470 Sum_probs=211.5
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|...+.||.|+||.||+|.+..++..|++|.+....... ......+.+.+|+.+++.++||||+++++++. +...+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~ 77 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQ--TGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-EEDNL 77 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccc--cchHHHHHHHHHHHHHHhcCCCCchheeeeEe-cCCeE
Confidence 4777899999999999999998899999999875432211 12234567889999999999999999999886 67789
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
++||||+++++|.+++...+.+++..+..++.||+.||.|||+.+ |+|+||+|+||+++.++.+||+|||++......
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 78 YIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 999999999999999988778999999999999999999999865 999999999999999999999999998876433
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
. ......|++.|+|||.+.... .++.++|+|||||++|+|++|..||............. .. ......
T Consensus 156 ~------~~~~~~~~~~y~~pe~~~~~~--~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---~~-~~~~~~ 223 (258)
T cd06632 156 S------FAKSFKGSPYWMAPEVIAQQG--GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG---RS-KELPPI 223 (258)
T ss_pred c------cccccCCCcceeCHHHhcCCC--CCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHH---hc-ccCCCc
Confidence 2 122346899999999875332 37889999999999999999999997765433332211 10 111112
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
++.++..+.+||.+||..+|.+||++.+++.||||
T Consensus 224 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 224 PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 34678999999999999999999999999999997
No 154
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=366.82 Aligned_cols=254 Identities=31% Similarity=0.478 Sum_probs=215.0
Q ss_pred EecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEec
Q 005678 410 LLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEY 489 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey 489 (683)
+||+|.||+||.|+|..+....|||-+.. +...+.+-+..|+..++.|+|.|||+++|+|. .++++-|+||-
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpe-------kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s-enGf~kIFMEq 653 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPE-------KDSREVQPLHEEIALHSTLRHKNIVRYLGSVS-ENGFFKIFMEQ 653 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccc-------ccchhhccHHHHHHHHHHHhhHhHHHHhhccC-CCCeEEEEeec
Confidence 69999999999999999999999997632 22334567889999999999999999999986 67799999999
Q ss_pred ccCCChhHHHh-cCCCc--chHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCcEEEEecCCccccccCcC
Q 005678 490 CSGKDLDAVLK-ATPVL--PEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGVAKVTDFGLSKIVEDDVG 565 (683)
Q Consensus 490 ~~ggsL~~~L~-~~~~L--se~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~vKL~DFGls~~~~~~~~ 565 (683)
.|||+|.++|. .-+++ .+..+-.+.+||+.||.|||+ +.|||||||.+|||++. .|.+||+|||.|+.+..-
T Consensus 654 VPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe--n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-- 729 (1226)
T KOG4279|consen 654 VPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE--NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-- 729 (1226)
T ss_pred CCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh--cceeeccccCCcEEEeeccceEEecccccchhhccC--
Confidence 99999999995 44777 788889999999999999998 45999999999999984 799999999999877532
Q ss_pred CCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCc
Q 005678 566 SQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRP 645 (683)
Q Consensus 566 ~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~ 645 (683)
. +.+-+..||..|||||++..+..+ |...+|||||||++.||.||++||....+....+-. ...-++..|.+.
T Consensus 730 -n--P~TETFTGTLQYMAPEvIDqG~RG-YG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk---VGmyKvHP~iPe 802 (1226)
T KOG4279|consen 730 -N--PCTETFTGTLQYMAPEVIDQGPRG-YGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK---VGMYKVHPPIPE 802 (1226)
T ss_pred -C--ccccccccchhhhChHhhccCCcC-CCchhhhhhccceeEeeccCCCCeeecCChhHhhhh---hcceecCCCCcH
Confidence 1 335566899999999999876644 899999999999999999999999876665543321 122333445556
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 646 AVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 646 ~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.+|.+++.||.+|+.++|.+||++.++|.+||++..+
T Consensus 803 elsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~ 839 (1226)
T KOG4279|consen 803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN 839 (1226)
T ss_pred HHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence 7899999999999999999999999999999999874
No 155
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.5e-39 Score=328.95 Aligned_cols=254 Identities=28% Similarity=0.506 Sum_probs=210.9
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.++|.+.+.||.|+||.||+|....++..|++|.+..... ...+.+|+.+++.++||||++++++|. +..
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~ 71 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---------LQEIIKEISILKQCDSPYIVKYYGSYF-KNT 71 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---------HHHHHHHHHHHHhCCCCcEeeeeeeee-cCC
Confidence 3578899999999999999999888899999998743211 467889999999999999999999986 568
Q ss_pred eEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+|+++||+++++|.+++.. ...+++..+..++.+++.||.|||..+ |+|+||+|+||+++.++.++|+|||++...
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~ 149 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEEGQAKLADFGVSGQL 149 (256)
T ss_pred cEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECCCCcEEEcccccchhc
Confidence 89999999999999999964 457899999999999999999999865 999999999999999999999999999876
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......|+..|+|||++... .++.++|||||||++|+|++|+.||............ .......
T Consensus 150 ~~~~~-----~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~ 218 (256)
T cd06612 150 TDTMA-----KRNTVIGTPFWMAPEVIQEI---GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI---PNKPPPT 218 (256)
T ss_pred ccCcc-----ccccccCCccccCHHHHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh---ccCCCCC
Confidence 54321 12234588999999988644 3789999999999999999999999765554332211 1111122
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
+.....++.++.+||.+||..+|.+||++.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 23334678899999999999999999999999999997
No 156
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.9e-39 Score=330.85 Aligned_cols=261 Identities=25% Similarity=0.433 Sum_probs=211.2
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecccccc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEI 478 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~ 478 (683)
..+++|.+.+.||.|+||.||+|.+..++..|++|++..... ....+.+|+.+++.+ .||||++++++|..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 74 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--------EEEEIKEEYNILRKYSNHPNIATFYGAFIK 74 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--------hHHHHHHHHHHHHHhcCCCChheEEEEEEe
Confidence 346899999999999999999999988999999999854321 134678899999999 79999999999853
Q ss_pred C-----CceEEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcE
Q 005678 479 D-----QNTFCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVA 549 (683)
Q Consensus 479 d-----~~~~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~v 549 (683)
. ...+++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~~~~~ 152 (275)
T cd06608 75 KNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTKNAEV 152 (275)
T ss_pred cCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEccCCeE
Confidence 2 3458999999999999998853 357899999999999999999999865 9999999999999999999
Q ss_pred EEEecCCccccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH
Q 005678 550 KVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI 627 (683)
Q Consensus 550 KL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i 627 (683)
+|+|||++....... .......|++.|+|||.+.... ...++.++|||||||+||+|++|..||........+
T Consensus 153 ~l~d~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 227 (275)
T cd06608 153 KLVDFGVSAQLDSTL-----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRAL 227 (275)
T ss_pred EECCCccceecccch-----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHH
Confidence 999999987654322 1123346899999999875432 345788999999999999999999999765443333
Q ss_pred HHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 628 LREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 628 l~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.. +.......+.....++..+.+||.+||..||.+|||+.+++.|||+
T Consensus 228 ~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 228 FK---IPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HH---hhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 22 1222222223333478899999999999999999999999999997
No 157
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-39 Score=337.33 Aligned_cols=262 Identities=26% Similarity=0.443 Sum_probs=212.5
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.+.|.+++.||+|+||+||++.+..++..||+|++..... ......+.+|+.++..++||||+++++++. +.+
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~ 76 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK------SSVRKQILRELQIMHECRSPYIVSFYGAFL-NEN 76 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc------chHHHHHHHHHHHHHHcCCCCcceEeeeEe-cCC
Confidence 4678889999999999999999999999999998754321 223457889999999999999999999986 568
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++||||+++++|..++...+.+++..+..++.+++.||.|||+. ++|+|+||+|.||+++.++.++|+|||++....
T Consensus 77 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~ 155 (284)
T cd06620 77 NICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV-HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI 155 (284)
T ss_pred EEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh-cCeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence 8999999999999999998877899999999999999999999973 249999999999999999999999999987553
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHH-------HHHH-HHHH
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQE-------RILR-EDTI 633 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e-------~il~-~~~i 633 (683)
... .....|+..|+|||++... .++.++|||||||++|+|++|..||....... .+.. ...+
T Consensus 156 ~~~-------~~~~~~~~~~~aPE~~~~~---~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd06620 156 NSI-------ADTFVGTSTYMSPERIQGG---KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI 225 (284)
T ss_pred hhc-------cCccccCcccCCHHHHccC---CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHH
Confidence 221 1234789999999988644 37889999999999999999999997554321 0111 0111
Q ss_pred HHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 634 IKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 634 ~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.......++ ...++..+.+||.+||..||.+||++.++++||||..++
T Consensus 226 ~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 226 VQEPPPRLP-SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred hhccCCCCC-chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 111111121 123788999999999999999999999999999997764
No 158
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.9e-39 Score=330.21 Aligned_cols=254 Identities=30% Similarity=0.488 Sum_probs=212.3
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||+|.+..++..||+|++....... ......+.+|+.++++++||||++++++|. ++..+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KGSVRNVLNERRILQELNHPFLVNLWYSFQ-DEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hhHHHHHHHHHHHHHhCCCCChHHHHHhhc-CCCeE
Confidence 4889999999999999999998899999999885432211 123567889999999999999999999986 67789
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
++|+||+.|++|..++.....+++..+..++.||+.||.|||+.+ |+|+||+|+||++++++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 999999999999999987778999999999999999999999865 999999999999999999999999998876443
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHHHHHhhccCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT--QERILREDTIIKARKVEF 641 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~--~e~il~~~~i~~~~~~~~ 641 (683)
. ......|+..|+|||++.... ++.++|+||||+++|+|++|..||..... ...+.. .......
T Consensus 154 ~------~~~~~~~~~~y~~PE~~~~~~---~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~ 219 (258)
T cd05578 154 T------LTTSTSGTPGYMAPEVLCRQG---YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRA-----KQETADV 219 (258)
T ss_pred c------cccccCCChhhcCHHHHcccC---CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHH-----Hhccccc
Confidence 2 112336889999999986544 78899999999999999999999986654 222211 1111223
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCH--HHHhcCccc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDV--LTLAQDPYL 678 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~--~eLl~hP~l 678 (683)
..++.++..+.++|.+||..+|.+||+. .+++.||||
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 220 LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred cCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 3345688999999999999999999999 999999998
No 159
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.8e-39 Score=332.20 Aligned_cols=257 Identities=28% Similarity=0.461 Sum_probs=208.5
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+.+.||.|+||.||+|.+..++..||+|.+...... .....+.+|+.+++.+.||||+++++.|. ..+.+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~ 74 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE------AIQKQILRELDILHKCNSPYIVGFYGAFY-NNGDI 74 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh------HHHHHHHHHHHHHHHCCCCchhhhheeee-cCCEE
Confidence 577788999999999999999999999999988654321 23456788999999999999999999986 56889
Q ss_pred EEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHh-cCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNK-RAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~-~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
++|+||+++++|.+++... ..+++..+..++.+++.||.|||+ .+ ++|+||||+||+++.++.++|+|||++....
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~ 152 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152 (265)
T ss_pred EEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence 9999999999999999765 779999999999999999999998 55 9999999999999999999999999987654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch-HHHHHH-HHHHHHhhcc
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT-QERILR-EDTIIKARKV 639 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~-~e~il~-~~~i~~~~~~ 639 (683)
.... ....|++.|+|||++... .++.++||||||+++|+|++|..||..... ...... ...+......
T Consensus 153 ~~~~-------~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 222 (265)
T cd06605 153 NSLA-------KTFVGTSSYMAPERIQGN---DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP 222 (265)
T ss_pred HHHh-------hcccCChhccCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC
Confidence 3211 114788999999998654 378999999999999999999999965421 111111 1111111111
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..+. ..++.++.+||.+||..+|.+||++.+++.||||+.
T Consensus 223 ~~~~-~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 223 RLPS-GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred CCCh-hhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 2221 127889999999999999999999999999999974
No 160
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.5e-39 Score=333.34 Aligned_cols=262 Identities=24% Similarity=0.392 Sum_probs=210.1
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecccccc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEI 478 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~ 478 (683)
...++|.+...||.|+||.||+|.+..++..||+|++..... ....+.+|+.++..+ +||||++++++|..
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~--------~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD--------VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc--------HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 356789999999999999999999999999999998743211 123456788899998 89999999998853
Q ss_pred C----CceEEEEEecccCCChhHHHh----cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEE
Q 005678 479 D----QNTFCTVLEYCSGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 479 d----~~~~~LV~Ey~~ggsL~~~L~----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vK 550 (683)
. .+.+++||||+++++|.+++. ....+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.+|
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEE
Confidence 2 246899999999999999885 3456899999999999999999999865 99999999999999999999
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHH
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERIL 628 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il 628 (683)
|+|||++......... .....|++.|+|||++.... ...++.++|||||||++|+|++|+.||........+.
T Consensus 169 l~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~ 243 (291)
T cd06639 169 LVDFGVSAQLTSTRLR-----RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF 243 (291)
T ss_pred Eeecccchhccccccc-----ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH
Confidence 9999998866432211 12236899999999875432 1236889999999999999999999997665443332
Q ss_pred HHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 629 REDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 629 ~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
. +.......+.....++..+.+||.+||..+|.+||++.++++||||+
T Consensus 244 ~---~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 244 K---IPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred H---HhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 2 11122222233345778999999999999999999999999999995
No 161
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6e-39 Score=331.02 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=204.5
Q ss_pred cccceeEEEEecccCceEEEEEEEc---cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDL---VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~---~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
..+.|.+.+.||+|+||.||+|.+. ..+.+||+|++..... ......+.+|+.++..++||||+++++++.
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 76 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS------DKQRRGFLAEALTLGQFDHSNIVRLEGVIT 76 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC------HHHHHHHHHHHHHHhcCCCCCcCeEEEEEe
Confidence 4567999999999999999999764 4567899998865321 122457889999999999999999999986
Q ss_pred cCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
..+.+++||||+++++|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||.
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~~~~~~l~dfg~ 153 (266)
T cd05064 77 -RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNSDLVCKISGFRR 153 (266)
T ss_pred -cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcCCCcEEECCCcc
Confidence 677899999999999999999653 57899999999999999999999865 99999999999999999999999998
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
+....... ........+++.|+|||++.... ++.++|||||||++|+|++ |..||......+.+. .+.
T Consensus 154 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~---~~~- 222 (266)
T cd05064 154 LQEDKSEA----IYTTMSGKSPVLWAAPEAIQYHH---FSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIK---AVE- 222 (266)
T ss_pred cccccccc----hhcccCCCCceeecCHHHHhhCC---ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH---HHH-
Confidence 76542211 11122345678899999886443 8899999999999999775 999997765543221 111
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+.+..++..+.+++.+||..+|.+||++.+|++
T Consensus 223 -~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 223 -DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 12234555678999999999999999999999999875
No 162
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1e-38 Score=324.54 Aligned_cols=257 Identities=27% Similarity=0.438 Sum_probs=208.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc-CCce
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI-DQNT 482 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~-d~~~ 482 (683)
+|.+.+.||.|+||.||++.+..++..||+|++...... ......+..|+.+++.++||||+++++.+.. ....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-----EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQT 75 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-----HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCE
Confidence 488899999999999999999999999999987554221 1224567889999999999999999987753 3567
Q ss_pred EEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhc---CCceEecccCCcceEeCCCCcEEEEecC
Q 005678 483 FCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKR---AQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~---g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
++++|||+++++|.+++.. ...+++..++.++.+|+.||.|||.. ..+|+|+||+|+||+++.++.+||+|||
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccc
Confidence 8999999999999999954 35789999999999999999999933 2459999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~ 635 (683)
++........ ......|++.|+|||.+.... ++.++||||||+++|+|++|..||....... ... .+..
T Consensus 156 ~~~~~~~~~~-----~~~~~~~~~~~~~pE~~~~~~---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~--~~~~ 224 (265)
T cd08217 156 LAKILGHDSS-----FAKTYVGTPYYMSPEQLNHMS---YDEKSDIWSLGCLIYELCALSPPFTARNQLQ-LAS--KIKE 224 (265)
T ss_pred ccccccCCcc-----cccccccCCCccChhhhcCCC---CCchhHHHHHHHHHHHHHHCCCcccCcCHHH-HHH--HHhc
Confidence 9987654321 122346899999999986443 7889999999999999999999998765322 211 1111
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
. ...+.+..++..+.+++.+||..+|.+||++.++++|||+
T Consensus 225 ~--~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 225 G--KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred C--CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 1 1112234688999999999999999999999999999996
No 163
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.1e-38 Score=324.07 Aligned_cols=253 Identities=25% Similarity=0.422 Sum_probs=207.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||+|.+..++..||||.+....... .....+.+|+.+++.++||||+++++.+. ..+.+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~ 74 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-----DERLAAQNECQVLKLLSHPNIIEYYENFL-EDKAL 74 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-----HHHHHHHHHHHHHhhCCCCchhheeeeEe-cCCEE
Confidence 5899999999999999999999999999999886543211 22457889999999999999999999886 67789
Q ss_pred EEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC-CcEEEEecCCcccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF-GVAKVTDFGLSKIV 560 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~-g~vKL~DFGls~~~ 560 (683)
++||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||+|.||+++.+ +.++|+|||++...
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKIL 152 (256)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence 9999999999999999653 45899999999999999999999855 9999999999999854 56899999999876
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... .....|++.|+|||++.... ++.++||||||+++|+|++|..||........... +... ..
T Consensus 153 ~~~~~------~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~---~~~~--~~ 218 (256)
T cd08220 153 SSKSK------AYTVVGTPCYISPELCEGKP---YNQKSDIWALGCVLYELASLKRAFEAANLPALVLK---IMSG--TF 218 (256)
T ss_pred CCCcc------ccccccCCcccCchhccCCC---CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHH---HHhc--CC
Confidence 54321 12236889999999986433 78899999999999999999999977654432221 1111 11
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.+....++.++.+||.+||..+|.+|||+.+++.||||
T Consensus 219 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 219 APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 22234588999999999999999999999999999997
No 164
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=6e-40 Score=374.43 Aligned_cols=267 Identities=29% Similarity=0.416 Sum_probs=220.0
Q ss_pred cccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccc
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDT 475 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~ 475 (683)
-+.+-.+++++.+.|.+|||+.||+|.+...|..||||.+-.. .+.....+.+|+.+|+.|+ |+|||.++|.
T Consensus 31 ~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-------de~~L~~v~~EI~~MK~L~gh~nIV~yids 103 (738)
T KOG1989|consen 31 TFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-------DEEALNAVKREIDIMKLLSGHKNIVSYIDS 103 (738)
T ss_pred EEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-------CHHHHHHHHHHHHHHHHhcCCCceeeEecc
Confidence 3466778999999999999999999999888899999986443 2234678899999999997 9999999994
Q ss_pred ccc---C---CceEEEEEecccCCChhHHHh--cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC
Q 005678 476 FEI---D---QNTFCTVLEYCSGKDLDAVLK--ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 476 f~~---d---~~~~~LV~Ey~~ggsL~~~L~--~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g 547 (683)
... . .-.++|+||||.||.|-+++. ....|++.+++.|+.++|.|+.+||...++|||||||-+||||+.+|
T Consensus 104 s~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g 183 (738)
T KOG1989|consen 104 SAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG 183 (738)
T ss_pred ccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC
Confidence 321 1 235789999999999999995 33459999999999999999999999988999999999999999999
Q ss_pred cEEEEecCCccccccCc-CCCcc---cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch
Q 005678 548 VAKVTDFGLSKIVEDDV-GSQGM---ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT 623 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~~-~~~~~---~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~ 623 (683)
..||||||.+.-.-... ....+ +---...-|+.|.+||++....+..++.|+|||+|||+||-|++..+||.....
T Consensus 184 ~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~ 263 (738)
T KOG1989|consen 184 NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK 263 (738)
T ss_pred CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc
Confidence 99999999875332211 11111 001112469999999999887777799999999999999999999999977643
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 624 QERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 624 ~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
. -+....+.||..+.++..+++||+.||..||.+||++-+++.+-+.
T Consensus 264 l--------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 264 L--------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred e--------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 1 1445678899989999999999999999999999999999876443
No 165
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8.1e-39 Score=330.93 Aligned_cols=261 Identities=31% Similarity=0.508 Sum_probs=209.0
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||+|.+..++..||||++...... ......+.+|+.+++.++||||+++++++. +...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~ 74 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-----GGIPNQALREIKALQACQHPYVVKLLDVFP-HGSGF 74 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-----chhhHHHHHHHHHHHhCCCCCCcceeeEEe-cCCee
Confidence 588999999999999999999899999999988654321 122457889999999999999999999986 67789
Q ss_pred EEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
++||||+ +++|..++.. ...+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++.....
T Consensus 75 ~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 75 VLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred EEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 9999999 9999999854 456899999999999999999999865 99999999999999999999999999987654
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH-------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK------- 635 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~------- 635 (683)
... .......|+.+|+|||++... ..++.++|||||||++|+|++|.+||........+........
T Consensus 152 ~~~----~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (286)
T cd07832 152 EEP----RLYSHQVATRWYRAPELLYGA--RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETW 225 (286)
T ss_pred CCC----CccccccCcccccCceeeecc--ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHH
Confidence 321 112334789999999987543 2368899999999999999999888876554332211110000
Q ss_pred --------hhccCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 636 --------ARKVEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 636 --------~~~~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.....++. .+.++..+.+||.+||.++|.+||++.+++.||||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 226 PGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 00111111 134678999999999999999999999999999984
No 166
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=9.4e-39 Score=331.02 Aligned_cols=259 Identities=29% Similarity=0.490 Sum_probs=205.8
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+++.||.|+||.||+|.+..++..||||.+....... .....+..|+.+++.++||||+++++++. +.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 74 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----GVPSTAIREISLLKELNHPNIVKLLDVIH-TENKL 74 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc-----ccchHHHHHHHHHHhcCCCCCcchhhhcc-cCCcE
Confidence 3788999999999999999999999999999876543211 12346778999999999999999999986 67789
Q ss_pred EEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
++||||+. ++|..++.. ...+++..+..++.+|+.||.|||..+ ++|+||+|+||+++.++.+||+|||++....
T Consensus 75 ~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 75 YLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 151 (284)
T ss_pred EEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999995 688888854 356899999999999999999999865 9999999999999999999999999987654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH------
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK------ 635 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~------ 635 (683)
.... ......+++.|+|||++.... .++.++|||||||++|+|++|..||.................
T Consensus 152 ~~~~-----~~~~~~~~~~y~aPE~~~~~~--~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (284)
T cd07860 152 VPVR-----TYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 224 (284)
T ss_pred cCcc-----ccccccccccccCCeEEecCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 3211 122235788999999885432 368899999999999999999999977655443322111000
Q ss_pred --------hhccCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 --------ARKVEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 --------~~~~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....++. .+.++.++.+||.+||..||.+||++.+++.||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 225 WPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 00001111 23578899999999999999999999999999998
No 167
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=8e-39 Score=331.31 Aligned_cols=262 Identities=28% Similarity=0.466 Sum_probs=211.0
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||||.+..... .......+.+|+.+++.+.||||++++++|. +.+.
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~ 74 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-----DEDVKKTALREVKVLRQLRHENIVNLKEAFR-RKGR 74 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-----cccchhHHHHHHHHHHhcCCCCeeehhheEE-ECCE
Confidence 369999999999999999999999999999998754322 1223456788999999999999999999996 5778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+++||||++++.|..++.....+++..+..++.+|+.||.|||..+ |+|+||+|.||+++.++.+||+|||++.....
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 75 LYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 9999999998888777766667999999999999999999999865 99999999999999999999999999987654
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA------ 636 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~------ 636 (683)
... .......|+++|+|||++... ..++.++||||||+++|+|++|..||......+.+.........
T Consensus 153 ~~~----~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (288)
T cd07833 153 RPA----SPLTDYVATRWYRAPELLVGD--TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQ 226 (288)
T ss_pred Ccc----ccccCcccccCCcCCchhcCC--CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHh
Confidence 321 112234688999999998654 14789999999999999999999999766554433321111100
Q ss_pred ---------hccCCC-----------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 637 ---------RKVEFP-----------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 637 ---------~~~~~p-----------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
....++ ....++.++.+||++||..+|++||++.+++.||||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 227 ELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred hhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 000010 112358899999999999999999999999999997
No 168
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.9e-38 Score=334.02 Aligned_cols=265 Identities=29% Similarity=0.460 Sum_probs=211.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||.|+||.||++.+..+++.|+||.+.... .........+.+|+.+++.++||||+++++.|. ..+.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~----~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQN----LILRNQIQQVFVERDILTFAENPFVVSMFCSFE-TKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhh----hhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-cCCE
Confidence 36889999999999999999999999999999875432 112233457788999999999999999999986 6678
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||++|++|..++...+.+++..+..++.+++.||.|||+.+ |+|+||||.|||++.+|.++|+|||+++....
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 9999999999999999988788999999999999999999999865 99999999999999999999999999874221
Q ss_pred CcCCC----------cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Q 005678 563 DVGSQ----------GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT 632 (683)
Q Consensus 563 ~~~~~----------~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~ 632 (683)
..... .........|++.|+|||.+.... ++.++|||||||++|+|++|..||......+ ++..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-~~~~-- 227 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQG---YGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQ-- 227 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH--
Confidence 11000 000111235788999999886433 7899999999999999999999997655433 2221
Q ss_pred HHHhhccCCCCC-cCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccCCC
Q 005678 633 IIKARKVEFPSR-PAVSNEAKDLIRRCLTYNQAERPD---VLTLAQDPYLTYS 681 (683)
Q Consensus 633 i~~~~~~~~p~~-~~~s~el~dLI~rCL~~dP~kRPS---~~eLl~hP~l~~~ 681 (683)
.......+|.. +.++.++.+||.+||..+|++||+ +.+++.||||...
T Consensus 228 -~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 228 -VISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred -HHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 11122223322 368899999999999999999998 7999999999653
No 169
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=341.42 Aligned_cols=258 Identities=29% Similarity=0.465 Sum_probs=224.7
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
-+.|..+++||+|.||.|.+|..+.++++||+|+++....... ..+.|-+.|-.+|+..+||.+..|...|+ ..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiak----dEVAHTlTE~RVL~~~~HPFLt~LKYsFQ-t~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAK----DEVAHTLTENRVLQNCRHPFLTSLKYSFQ-TQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeeh----HHhhhhhhHHHHHHhccCcHHHHhhhhhc-cCc
Confidence 3567888999999999999999999999999999877654332 33678889999999999999999998997 678
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+|+||||..||.|..+|.+...+++..++.+-..|++||.|||+. +||+||||..|+|||.+|++||+|||+|+---
T Consensus 242 rlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~--~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR--NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred eEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC--CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 9999999999999999999888999999999999999999999985 49999999999999999999999999998532
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
... ..++..+|||.|+|||++.... |...+|+|.+||++|||+||+.||...+.. .++ .++....+.|
T Consensus 320 ~~g-----~t~kTFCGTPEYLAPEVleDnD---YgraVDWWG~GVVMYEMmCGRLPFyn~dh~-kLF---eLIl~ed~kF 387 (516)
T KOG0690|consen 320 KYG-----DTTKTFCGTPEYLAPEVLEDND---YGRAVDWWGVGVVMYEMMCGRLPFYNKDHE-KLF---ELILMEDLKF 387 (516)
T ss_pred ccc-----ceeccccCChhhcCchhhcccc---ccceeehhhhhHHHHHHHhccCcccccchh-HHH---HHHHhhhccC
Confidence 221 2356779999999999997555 899999999999999999999999765443 332 3456677888
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTY 680 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~ 680 (683)
|. .++++++.|+..+|..||.+|. ++.++.+|+||..
T Consensus 388 Pr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~ 429 (516)
T KOG0690|consen 388 PR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFAS 429 (516)
T ss_pred Cc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhcc
Confidence 85 6999999999999999999997 6999999999974
No 170
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7.8e-39 Score=330.99 Aligned_cols=262 Identities=26% Similarity=0.416 Sum_probs=203.6
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHH-HhhcCCCceeeeccccccCCc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNI-HKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~i-l~~L~HpnIV~L~~~f~~d~~ 481 (683)
+.|.+.+.||+|+||.||+|.+..+|..||||.+........ ...+..|+.+ ++.+.||||+++++++. ..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~------~~~~~~e~~~~~~~~~~~~iv~~~~~~~-~~~ 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE------QKRLLMDLDISMRSVDCPYTVTFYGALF-REG 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH------HHHHHHHHHHHHHHcCCCCeeeeeEEEe-cCC
Confidence 368899999999999999999999999999998865432111 1234445554 66678999999999986 567
Q ss_pred eEEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 482 TFCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
.+|+||||++ ++|..++.. ...+++..+..++.||+.||.|||+. .+++|+||||+|||++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~~i~h~dlkp~nil~~~~~~~kl~dfg~~ 151 (283)
T cd06617 74 DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK-LSVIHRDVKPSNVLINRNGQVKLCDFGIS 151 (283)
T ss_pred cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 7999999996 688777743 34689999999999999999999985 14999999999999999999999999998
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKT-PLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~-~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
........ .....|+..|+|||++..... ..++.++|+|||||++|+|++|+.||.........+. .....
T Consensus 152 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~--~~~~~ 223 (283)
T cd06617 152 GYLVDSVA------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK--QVVEE 223 (283)
T ss_pred cccccccc------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH--HHHhc
Confidence 86543211 122368899999998865332 3478899999999999999999999965332211111 11122
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
....++. ..+|.++.+||.+||..+|.+||++.+++.||||...+
T Consensus 224 ~~~~~~~-~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 224 PSPQLPA-EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred CCCCCCc-cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 2222221 35789999999999999999999999999999998765
No 171
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.4e-39 Score=331.89 Aligned_cols=259 Identities=24% Similarity=0.403 Sum_probs=207.8
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecccccc-
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEI- 478 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~- 478 (683)
....|.+.+.||.|+||.||+|.+..++..||+|++.... .....+..|+.++..+ +||||++++++|..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--------DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--------HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 4568899999999999999999999999999999874431 1134567889999998 69999999999842
Q ss_pred ----CCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEE
Q 005678 479 ----DQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVT 552 (683)
Q Consensus 479 ----d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~ 552 (683)
....+|+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+|+||+|+||+++.++.++|+
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~~~~~~l~ 163 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTENAEVKLV 163 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEe
Confidence 24678999999999999999964 345888889999999999999999865 9999999999999999999999
Q ss_pred ecCCccccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Q 005678 553 DFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRE 630 (683)
Q Consensus 553 DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~ 630 (683)
|||++........ ......|++.|+|||.+.... ...++.++|||||||++|+|++|..||........+..
T Consensus 164 dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~- 237 (282)
T cd06636 164 DFGVSAQLDRTVG-----RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL- 237 (282)
T ss_pred eCcchhhhhcccc-----CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh-
Confidence 9999876543211 122346899999999875322 33478899999999999999999999976554433321
Q ss_pred HHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 631 DTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 631 ~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
+....... .....++..+.+||.+||..||.+||++.+|++||||
T Consensus 238 --~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 238 --IPRNPPPK-LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred --HhhCCCCC-CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 11111111 1123578999999999999999999999999999997
No 172
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.1e-39 Score=359.45 Aligned_cols=257 Identities=23% Similarity=0.279 Sum_probs=199.9
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
....|.+.+.||+|+||.||+|.+..++..||||.... ..+.+|+.+++.|+|||||++++++. ..
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------------~~~~~E~~iL~~L~HpnIv~l~~~~~-~~ 232 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------------ASSVHEARLLRRLSHPAVLALLDVRV-VG 232 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------------cCHHHHHHHHHHCCCCCCCcEEEEEE-EC
Confidence 35579999999999999999999999999999995321 23467999999999999999999886 56
Q ss_pred ceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
+..|+|||++ .++|..++.. ...+++..+..|+.||+.||.|||..+ ||||||||+||||+.++.+||+|||+++.
T Consensus 233 ~~~~lv~e~~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDLKP~NILl~~~~~vkL~DFGla~~ 309 (461)
T PHA03211 233 GLTCLVLPKY-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG--IIHRDIKTENVLVNGPEDICLGDFGAACF 309 (461)
T ss_pred CEEEEEEEcc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECcCCHHHEEECCCCCEEEcccCCcee
Confidence 7889999999 4688888754 356999999999999999999999865 99999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCC-Cch------HHHHHHHHH
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGH-DQT------QERILREDT 632 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~-~~~------~e~il~~~~ 632 (683)
+...... .......||+.|+|||++.... ++.++|||||||+||||++|..|+.. ... ...+.....
T Consensus 310 ~~~~~~~---~~~~~~~GT~~Y~APE~~~~~~---~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~ 383 (461)
T PHA03211 310 ARGSWST---PFHYGIAGTVDTNAPEVLAGDP---YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIR 383 (461)
T ss_pred ccccccc---ccccccCCCcCCcCHHHHcCCC---CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHH
Confidence 6432111 1122347999999999986543 89999999999999999998765422 111 111111000
Q ss_pred HHHhhccCCC--------------------------CC---cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 633 IIKARKVEFP--------------------------SR---PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 633 i~~~~~~~~p--------------------------~~---~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
........++ .+ ..++.++.+||.+||.+||.+|||+.++|+||||+.
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 384 QAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 0000000111 11 135668999999999999999999999999999975
No 173
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.9e-39 Score=360.74 Aligned_cols=259 Identities=31% Similarity=0.460 Sum_probs=211.7
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-C-----Cceeee
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-H-----HHIVRL 472 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-H-----pnIV~L 472 (683)
+.+.-+|.++++||+|+||.|.+|+|..++..||||+++.. ..+......|+.||..|+ | -|||++
T Consensus 182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~--------k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm 253 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK--------KRFLRQAQIEIRILELLNKHDPDDKYNIVRM 253 (586)
T ss_pred ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC--------hHHHHHHHHHHHHHHHHhccCCCCCeeEEEe
Confidence 45566999999999999999999999999999999998543 244567778999999997 4 389999
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC--CCc
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE--FGV 548 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~--~g~ 548 (683)
+++|. ..+++|||+|.+ ..+|.++|+.+ ..|+...++.|+.||+.||.+||+.+ |||+||||+||||.. ...
T Consensus 254 ~d~F~-fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~~~r~~ 329 (586)
T KOG0667|consen 254 LDYFY-FRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKDPKRSR 329 (586)
T ss_pred eeccc-cccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeeccCCcCc
Confidence 99996 789999999999 67999999765 46899999999999999999999865 999999999999975 447
Q ss_pred EEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHH
Q 005678 549 AKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERIL 628 (683)
Q Consensus 549 vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il 628 (683)
+||+|||.|...... +. ...-+..|.|||+|.+.. |+.+.||||||||+.||++|.+.|.+....+.+.
T Consensus 330 vKVIDFGSSc~~~q~-------vy-tYiQSRfYRAPEVILGlp---Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~ 398 (586)
T KOG0667|consen 330 IKVIDFGSSCFESQR-------VY-TYIQSRFYRAPEVILGLP---YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLA 398 (586)
T ss_pred eeEEecccccccCCc-------ce-eeeeccccccchhhccCC---CCCccceeehhhhHHhHhcCccccCCCCHHHHHH
Confidence 999999999876532 11 446778899999998766 9999999999999999999999998887777664
Q ss_pred HHHHHHHh------------------------------------------------hccCCC-CC-------c-CCCHHH
Q 005678 629 REDTIIKA------------------------------------------------RKVEFP-SR-------P-AVSNEA 651 (683)
Q Consensus 629 ~~~~i~~~------------------------------------------------~~~~~p-~~-------~-~~s~el 651 (683)
....+... .....| .. + .-...+
T Consensus 399 ~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F 478 (586)
T KOG0667|consen 399 RIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLF 478 (586)
T ss_pred HHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHH
Confidence 32111100 000011 00 0 112357
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 652 KDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 652 ~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.+||.+||.+||..|+|+.++++||||+.
T Consensus 479 ~dflk~~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 479 IDFLKRCLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred HHHHHHHhccCchhcCCHHHHhcCccccc
Confidence 89999999999999999999999999983
No 174
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-42 Score=347.60 Aligned_cols=256 Identities=26% Similarity=0.475 Sum_probs=222.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
-|.++..||+|+||.||+|+++.+|..||||.+... ..+++++.|+.|+.+++.|++|++|+.|. ....+
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~---------sDLQEIIKEISIMQQC~S~yVVKYYGSYF-K~sDL 103 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD---------TDLQEIIKEISIMQQCKSKYVVKYYGSYF-KHSDL 103 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc---------chHHHHHHHHHHHHHcCCchhhhhhhhhc-cCCce
Confidence 467788999999999999999999999999987543 22578899999999999999999999986 45568
Q ss_pred EEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+||||||..|+..+++. +.++|++.++..++...+.||.|||... -||||||..||||+.+|.+||+|||.+..+.+
T Consensus 104 WIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD 181 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD 181 (502)
T ss_pred EeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEcccchhhhhhccccchhhh
Confidence 89999999999999995 5678999999999999999999999854 89999999999999999999999999987754
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
. |.......|||.|||||++..-+ |+.++||||||++..||.-|++||..-.+...++- +-......|.
T Consensus 182 T-----MAKRNTVIGTPFWMAPEVI~EIG---Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM---IPT~PPPTF~ 250 (502)
T KOG0574|consen 182 T-----MAKRNTVIGTPFWMAPEVIEEIG---YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM---IPTKPPPTFK 250 (502)
T ss_pred h-----HHhhCccccCcccccHHHHHHhc---cchhhhHhhhcchhhhhhcCCCCcccccccceeEe---ccCCCCCCCC
Confidence 4 33445568999999999997666 89999999999999999999999987666554432 2233445565
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.+...|.++.+||+.||-++|++|-++.+|++|||+++++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 5667899999999999999999999999999999999986
No 175
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.4e-38 Score=324.43 Aligned_cols=254 Identities=24% Similarity=0.459 Sum_probs=209.3
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||++.+..++..||+|.+....... .....+.+|+.+++.++||||++++++|. +.+.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~ 74 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-----KEREESRKEVAVLSNMKHPNIVQYQESFE-ENGNL 74 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-----HHHHHHHHHHHHHHhCCCCCeeeeEeeec-CCCeE
Confidence 5899999999999999999999999999999875432211 12357888999999999999999999986 67789
Q ss_pred EEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++....
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~ 152 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTIKLGDFGIARVLN 152 (256)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEEeeccceeecC
Confidence 9999999999999998643 35789999999999999999999865 9999999999999999999999999997654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
... .......|++.|+|||++.... ++.++|+|||||++|+|++|..||......+.... +... ...
T Consensus 153 ~~~-----~~~~~~~~~~~~~~pe~~~~~~---~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~---~~~~--~~~ 219 (256)
T cd08218 153 STV-----ELARTCIGTPYYLSPEICENRP---YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK---IIRG--SYP 219 (256)
T ss_pred cch-----hhhhhccCCccccCHHHhCCCC---CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH---HhcC--CCC
Confidence 321 1122346889999999886433 78899999999999999999999976655433221 1111 111
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
+....++.++.++|.+||..+|.+||++.+++.||||
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 2334688999999999999999999999999999997
No 176
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=9.1e-39 Score=333.81 Aligned_cols=265 Identities=31% Similarity=0.461 Sum_probs=209.1
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||+|.+..++..||||.+....... ........+..|+.+++.++||||++++++|. +.+.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~ 77 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKE--AKDGINFTALREIKLLQELKHPNIIGLLDVFG-HKSNI 77 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEecccccc--ccchhhHHHHHHHHHHhhcCCCCChhhhheee-cCCEE
Confidence 5888999999999999999998899999999986543221 11123456778999999999999999999997 57889
Q ss_pred EEEEecccCCChhHHHhcCC-CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLKATP-VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~-~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
++||||+ +++|..++.... .+++..+..++.||+.||.|||+.+ |+|+||+|+|||++.+|.++|+|||++.....
T Consensus 78 ~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 78 NLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred EEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999999 899999997765 7999999999999999999999965 99999999999999999999999999987654
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA------ 636 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~------ 636 (683)
... ......+++.|+|||.+... ..++.++|||||||++|+|++|.+||......+.+.........
T Consensus 155 ~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (298)
T cd07841 155 PNR-----KMTHQVVTRWYRAPELLFGA--RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW 227 (298)
T ss_pred CCc-----cccccccceeeeCHHHHhCC--CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhh
Confidence 311 12223578899999987432 23788999999999999999998888665543322111100000
Q ss_pred -------hccC---CC------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 637 -------RKVE---FP------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 637 -------~~~~---~p------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.... .+ ....++..+.+||.+||..+|.+||++.+++.||||+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~ 288 (298)
T cd07841 228 PGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSND 288 (298)
T ss_pred hhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCC
Confidence 0000 00 013457889999999999999999999999999999874
No 177
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.3e-38 Score=322.84 Aligned_cols=254 Identities=26% Similarity=0.436 Sum_probs=210.8
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+++.||.|+||.||.+.+..++..|++|.+....... .....+.+|+.++++++||||++++++|. +.+.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~ 74 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-----KERRDALNEIVILSLLQHPNIIAYYNHFM-DDNTL 74 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-----hHHHHHHHHHHHHHhCCCCCeeEEEeEEe-cCCeE
Confidence 5899999999999999999999999999999875443211 22456789999999999999999999996 67889
Q ss_pred EEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
++||||+++++|..++... ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++....
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~ 152 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKAGLIKLGDFGISKILG 152 (256)
T ss_pred EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence 9999999999999999654 56899999999999999999999865 9999999999999999999999999998764
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.... ......|++.|+|||++.... ++.++||||||+++|+|++|..||......+.... +. .... .
T Consensus 153 ~~~~-----~~~~~~~~~~y~ape~~~~~~---~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~---~~-~~~~-~ 219 (256)
T cd08221 153 SEYS-----MAETVVGTPYYMSPELCQGVK---YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK---IV-QGNY-T 219 (256)
T ss_pred cccc-----cccccCCCccccCHhhcCCCC---CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HH-cCCC-C
Confidence 4321 122346899999999886443 68899999999999999999999976555443321 11 1111 1
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
+..+.++..+.+||.+||..+|.+||++.++++|||+
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 2235678999999999999999999999999999996
No 178
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7e-39 Score=337.57 Aligned_cols=255 Identities=24% Similarity=0.401 Sum_probs=190.2
Q ss_pred EEEecccCceEEEEEEEcc--CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc-CCceEE
Q 005678 408 LNLLGKGGFSEVYKAYDLV--EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI-DQNTFC 484 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~--~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~-d~~~~~ 484 (683)
...||+|+||+||+|.+.. ++..||+|.+..... ...+.+|+.+++.++||||++++++|.. ....+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 76 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---------SMSACREIALLRELKHPNVIALQKVFLSHSDRKVW 76 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---------cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEE
Confidence 3679999999999998643 568899998754321 1346789999999999999999998743 456789
Q ss_pred EEEecccCCChhHHHhc---------CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEe----CCCCcEEE
Q 005678 485 TVLEYCSGKDLDAVLKA---------TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLF----DEFGVAKV 551 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~---------~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILL----d~~g~vKL 551 (683)
+||||++ ++|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||
T Consensus 77 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~kl 153 (317)
T cd07867 77 LLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKI 153 (317)
T ss_pred EEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEccCCCCCCcEEE
Confidence 9999995 577777642 124889999999999999999999965 9999999999999 46689999
Q ss_pred EecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH----
Q 005678 552 TDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI---- 627 (683)
Q Consensus 552 ~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i---- 627 (683)
+|||+++........ ........||+.|+|||++... ..++.++|||||||++|+|++|.+||.........
T Consensus 154 ~DfG~a~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~ 229 (317)
T cd07867 154 ADMGFARLFNSPLKP--LADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPF 229 (317)
T ss_pred eeccceeccCCCccc--ccccCcceecccccCcHHhcCC--CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccc
Confidence 999999876543211 1122344789999999988542 23788999999999999999999999643321000
Q ss_pred --HHHHHHHHh-------------------------hccCC----------CCCcCCCHHHHHHHHHhcccCCCCCCCHH
Q 005678 628 --LREDTIIKA-------------------------RKVEF----------PSRPAVSNEAKDLIRRCLTYNQAERPDVL 670 (683)
Q Consensus 628 --l~~~~i~~~-------------------------~~~~~----------p~~~~~s~el~dLI~rCL~~dP~kRPS~~ 670 (683)
.....+... ..... ......+..+.+||.+||..||.+|||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~ 309 (317)
T cd07867 230 HHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSE 309 (317)
T ss_pred cHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHH
Confidence 000000000 00000 00123456788999999999999999999
Q ss_pred HHhcCccc
Q 005678 671 TLAQDPYL 678 (683)
Q Consensus 671 eLl~hP~l 678 (683)
++++||||
T Consensus 310 e~l~hp~f 317 (317)
T cd07867 310 QALQDPYF 317 (317)
T ss_pred HHhcCCCC
Confidence 99999998
No 179
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-40 Score=356.22 Aligned_cols=266 Identities=29% Similarity=0.495 Sum_probs=211.5
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeecccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTF 476 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f 476 (683)
+.+-+..|.+++.||+||.+.||++.... .+.||+|.+.. ...+...+.-++.|+..|.+|+ |.+||+|||+-
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~-----~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE 429 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVL-----LEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE 429 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHH-----hhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee
Confidence 35567889999999999999999997543 45555554322 2334455788999999999994 99999999875
Q ss_pred ccCCceEEEEEecccCCChhHHHhcCC-CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKATP-VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~~~-~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
..++.+|+||||- ..+|..+|+... .++...++.|..||+.|+.++|.+| |||.||||.|+|+-. |.+||+|||
T Consensus 430 -v~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g--IVHSDLKPANFLlVk-G~LKLIDFG 504 (677)
T KOG0596|consen 430 -VTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG--IVHSDLKPANFLLVK-GRLKLIDFG 504 (677)
T ss_pred -ccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc--eeecCCCcccEEEEe-eeEEeeeec
Confidence 4688999999975 679999997654 3444588999999999999999977 999999999999987 999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCC--------CCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTP--------LISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI 627 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~--------~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i 627 (683)
+|..+..+.... .....+||+.||+||.+...... .++.++||||||||||+|++|++||+.......-
T Consensus 505 IA~aI~~DTTsI---~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aK 581 (677)
T KOG0596|consen 505 IANAIQPDTTSI---VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAK 581 (677)
T ss_pred hhcccCccccce---eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHH
Confidence 999988765432 23345899999999998643321 3678999999999999999999999876644322
Q ss_pred HHHHHHHHh-hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 628 LREDTIIKA-RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 628 l~~~~i~~~-~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
+ ..|... ..++||..+.-. ++.++++.||..||.+||++.+||+|||++.
T Consensus 582 l--~aI~~P~~~Iefp~~~~~~-~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 582 L--HAITDPNHEIEFPDIPEND-ELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred H--HhhcCCCccccccCCCCch-HHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 2 222222 556777654333 3999999999999999999999999999985
No 180
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.8e-38 Score=330.72 Aligned_cols=262 Identities=30% Similarity=0.487 Sum_probs=203.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCCc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~~ 481 (683)
++|.+.+.||.|+||.||+|.+..++..||||.+....... .....+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-----GIPPTALREISLLQMLSESIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-----CCchHHHHHHHHHHHccCCCCccceeeeEeecCC
Confidence 46899999999999999999999999999999875542211 12346778999999995 6999999998864332
Q ss_pred ----eEEEEEecccCCChhHHHhc-----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCcEEE
Q 005678 482 ----TFCTVLEYCSGKDLDAVLKA-----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGVAKV 551 (683)
Q Consensus 482 ----~~~LV~Ey~~ggsL~~~L~~-----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~vKL 551 (683)
.+|+||||+++ +|..++.. ...+++..+..++.||+.||.|||+.+ |+|+||+|+|||++. ++.+||
T Consensus 76 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~~~~~~kl 152 (295)
T cd07837 76 NGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDKQKGLLKI 152 (295)
T ss_pred CCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEecCCCeEEE
Confidence 38999999975 78888743 235899999999999999999999865 999999999999998 899999
Q ss_pred EecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Q 005678 552 TDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRED 631 (683)
Q Consensus 552 ~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~ 631 (683)
+|||++......... .....++++|+|||++... ..++.++|||||||++|+|++|..||.............
T Consensus 153 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~ 225 (295)
T cd07837 153 ADLGLGRAFSIPVKS-----YTHEIVTLWYRAPEVLLGS--THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF 225 (295)
T ss_pred eecccceecCCCccc-----cCCcccccCCCChHHhhCC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 999998765332111 1223578999999987532 237889999999999999999999998765544332211
Q ss_pred HHHH-hhc------------cCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 632 TIIK-ARK------------VEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 632 ~i~~-~~~------------~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.... ... ..++. .+.++..+.+||.+||.+||.+||++.+++.||||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 1000 000 00110 145789999999999999999999999999999985
No 181
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.3e-38 Score=324.65 Aligned_cols=258 Identities=28% Similarity=0.456 Sum_probs=214.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.+.+.||.|+||.||+|.+..++..|+||++...... .....+.+|+.++..++||||++++++|. ..+.+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~ 74 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE------EFRKQLLRELKTLRSCESPYVVKCYGAFY-KEGEI 74 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch------HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-cCCeE
Confidence 588899999999999999999999999999988654321 23467889999999999999999999986 56889
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNK-RAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~-~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
++||||+++++|.+++.....+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++..+..
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 75 SIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999999999877789999999999999999999998 66 99999999999999999999999999987654
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCc--hHHHHHHHHHHHHhhccC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQ--TQERILREDTIIKARKVE 640 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~--~~e~il~~~~i~~~~~~~ 640 (683)
.... .....|+..|+|||.+... .++.++||||||+++|+|++|..||.... ....... .+... ..
T Consensus 153 ~~~~-----~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~--~~~~~--~~ 220 (264)
T cd06623 153 TLDQ-----CNTFVGTVTYMSPERIQGE---SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQ--AICDG--PP 220 (264)
T ss_pred CCCc-----ccceeecccccCHhhhCCC---CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHH--HHhcC--CC
Confidence 3211 1233688999999988654 37889999999999999999999997764 2222211 11111 11
Q ss_pred CCCCcC-CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 641 FPSRPA-VSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 641 ~p~~~~-~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.+.... ++..+.++|.+||..+|.+||++.++++||||+.++
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 222234 789999999999999999999999999999998764
No 182
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.1e-39 Score=327.31 Aligned_cols=250 Identities=34% Similarity=0.509 Sum_probs=206.6
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecc
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYC 490 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~ 490 (683)
||.|+||.||+|.+..++..||+|++....... ......+.+|+.+++.++||||+++++.+. ++..+|+||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE----TGQQEHIFSEKEILEECNHPFIVKLYRTFK-DKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh----hhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-cCCccEEEEecC
Confidence 799999999999998889999999986543221 123467889999999999999999999886 678899999999
Q ss_pred cCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCccc
Q 005678 491 SGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGME 570 (683)
Q Consensus 491 ~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~ 570 (683)
++++|.+++.....+++..+..++.||+.||.|||+.+ ++|+||+|.||+++.++.++|+|||++.......
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~------ 147 (262)
T cd05572 76 LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ------ 147 (262)
T ss_pred CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc------
Confidence 99999999987777999999999999999999999855 9999999999999999999999999998765431
Q ss_pred ccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHHH-hhccCCCCCcCCC
Q 005678 571 LTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQ-ERILREDTIIK-ARKVEFPSRPAVS 648 (683)
Q Consensus 571 l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~-e~il~~~~i~~-~~~~~~p~~~~~s 648 (683)
......|++.|+|||.+.... ++.++|+||||+++|+|++|..||...... ...+. .+.. .....+| ..++
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 220 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKG---YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYN--DILKGNGKLEFP--NYID 220 (262)
T ss_pred ccccccCCcCccChhHhcCCC---CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHH--HHhccCCCCCCC--cccC
Confidence 122336899999999876433 788999999999999999999999766521 11111 1111 2223333 4568
Q ss_pred HHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCC
Q 005678 649 NEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTY 680 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~ 680 (683)
.++.+||.+||..+|.+||+ +.++++||||..
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 99999999999999999999 999999999974
No 183
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3e-38 Score=325.01 Aligned_cols=257 Identities=29% Similarity=0.414 Sum_probs=203.1
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.+.....||+|+||.||+|.+..++..||+|.+.... ......+.+|+.+++.++||||+++++++. ..+.
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 79 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-------SRYVQPLHEEIALHSYLKHRNIVQYLGSDS-ENGF 79 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC-------HHHHHHHHHHHHHHHhcCCCCeeeeeeeec-cCCE
Confidence 33444568999999999999999999999999875432 122457889999999999999999999886 6778
Q ss_pred EEEEEecccCCChhHHHhcC-CCc--chHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCcEEEEecCCcc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT-PVL--PEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGVAKVTDFGLSK 558 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~-~~L--se~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~vKL~DFGls~ 558 (683)
+++|+||+++++|.+++... ..+ ++..+..++.||+.||.|||..+ |+|+||||.|||++. ++.++|+|||++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999999653 445 78888999999999999999865 999999999999986 6799999999987
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
....... ......|++.|+|||++.... ..++.++|||||||++|+|++|..||............. ....
T Consensus 158 ~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~-~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~---~~~~ 228 (268)
T cd06624 158 RLAGINP-----CTETFTGTLQYMAPEVIDKGP-RGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV---GMFK 228 (268)
T ss_pred ecccCCC-----ccccCCCCccccChhhhcccc-ccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh---hhhc
Confidence 6543211 112236889999999985432 236889999999999999999999997544322221110 0111
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....+..++.++.+||.+||..+|.+||++.+++.||||
T Consensus 229 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 1111234688999999999999999999999999999997
No 184
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-38 Score=330.00 Aligned_cols=260 Identities=27% Similarity=0.436 Sum_probs=207.1
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc-CCc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI-DQN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~-d~~ 481 (683)
++|...+.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||++++++|.. ..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN------PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSS 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc------hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCC
Confidence 468899999999999999999999999999998754321 1234568889999999999999999998753 345
Q ss_pred eEEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 482 TFCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
.+|+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 75 SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecCCeEEEeecccc
Confidence 78999999999999988742 356899999999999999999999865 999999999999999999999999998
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch----HHHHHHHHHH
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT----QERILREDTI 633 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~----~e~il~~~~i 633 (683)
....... .....++..|+|||.+.... ++.++|||||||++|+|++|..||..... ..... ..+
T Consensus 153 ~~~~~~~-------~~~~~~~~~y~~pE~~~~~~---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~ 220 (287)
T cd06621 153 GELVNSL-------AGTFTGTSFYMAPERIQGKP---YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL--SYI 220 (287)
T ss_pred ccccccc-------cccccCCccccCHHHhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH--HHH
Confidence 7654321 11235788999999886443 78899999999999999999999976521 11111 111
Q ss_pred HHhhccCCCCC----cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 634 IKARKVEFPSR----PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 634 ~~~~~~~~p~~----~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.......++.. ...++.+.+||.+||..+|.+|||+.+++.||||+..+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 221 VNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred hcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 11111111111 23467899999999999999999999999999998765
No 185
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.3e-39 Score=349.14 Aligned_cols=260 Identities=22% Similarity=0.350 Sum_probs=203.9
Q ss_pred cccccccceeEEEEecccCceEEEEEEE-----ccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCcee
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYD-----LVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIV 470 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d-----~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV 470 (683)
.+.+..++|.+.+.||+|+||.||+|.+ ..++..||||++...... .....+.+|+.++..+ .|||||
T Consensus 29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~~Ei~il~~l~~HpnIv 102 (375)
T cd05104 29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL------TEREALMSELKVLSYLGNHINIV 102 (375)
T ss_pred ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc------HHHHHHHHHHHHHHHhcCCccee
Confidence 3455567899999999999999999963 346778999998543221 1235678899999999 899999
Q ss_pred eeccccccCCceEEEEEecccCCChhHHHhcC------------------------------------------------
Q 005678 471 RLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT------------------------------------------------ 502 (683)
Q Consensus 471 ~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~------------------------------------------------ 502 (683)
+++++|. +.+..++|||||++|+|.+++...
T Consensus 103 ~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (375)
T cd05104 103 NLLGACT-VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPT 181 (375)
T ss_pred eeeeeec-cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccc
Confidence 9999986 677889999999999999998532
Q ss_pred ---------------------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 503 ---------------------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 503 ---------------------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
..+++..+..++.||+.||.|||+.+ |+||||||.|||++.++.+||+|||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~DfG 259 (375)
T cd05104 182 KADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN--CIHRDLAARNILLTHGRITKICDFG 259 (375)
T ss_pred ccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCchhhEEEECCCcEEEecCc
Confidence 14678889999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
++..+..... ........+++.|+|||++.... ++.++|||||||++|+|++ |..||........+... +.
T Consensus 260 ~a~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~--~~ 331 (375)
T cd05104 260 LARDIRNDSN---YVVKGNARLPVKWMAPESIFNCV---YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM--IK 331 (375)
T ss_pred cceeccCccc---ccccCCCCCCcceeChhHhcCCC---CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH--HH
Confidence 9987643321 11112234567899999986443 8899999999999999997 89999765544333221 11
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.. .....+...+.++.+||.+||..||.+||++.++++.
T Consensus 332 ~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 332 EG--YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred hC--ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 11 1222234578899999999999999999999999864
No 186
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.1e-38 Score=334.66 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=213.9
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
..++|.+.+.||.|+||.||++.+..++..||+|.+..... .....+.+|+.+++.++||||+++++.|. +.
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-------~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~ 88 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-------PKKELIINEILVMRENKHPNIVNYLDSYL-VG 88 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-------hHHHHHHHHHHHHhhcCCCCeeehhheee-eC
Confidence 34789999999999999999999988999999998743211 12356788999999999999999999986 56
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
+.+++|+||+++++|..++... .+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~~~~~kL~dfg~~~~~ 165 (293)
T cd06647 89 DELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (293)
T ss_pred CcEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcCCCCEEEccCcceecc
Confidence 7889999999999999999765 4889999999999999999999865 999999999999999999999999998765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......|++.|+|||++.... ++.++|||||||++|+|++|..||........... +.......
T Consensus 166 ~~~~~-----~~~~~~~~~~y~~PE~~~~~~---~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~ 234 (293)
T cd06647 166 TPEQS-----KRSTMVGTPYWMAPEVVTRKA---YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGTPE 234 (293)
T ss_pred ccccc-----ccccccCChhhcCchhhccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee---hhcCCCCC
Confidence 43221 112236889999999886433 78899999999999999999999976654332211 11122333
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
++....++..+.+||.+||..+|.+||++.+++.||||+.++
T Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 235 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 444456788999999999999999999999999999999765
No 187
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.9e-38 Score=334.33 Aligned_cols=261 Identities=25% Similarity=0.379 Sum_probs=210.5
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
....+|.+.+.||.|+||+||+|.+..++..||+|.+....... ......+.+|+.+++.++||||++++++|. +
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-~ 86 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-R 86 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----HHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-e
Confidence 34567999999999999999999998899999999875432221 123457889999999999999999999986 6
Q ss_pred CceEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
.+..|+||||++ ++|.+++. ....+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.
T Consensus 87 ~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~~~~~kL~dfg~~~ 163 (307)
T cd06607 87 EHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTEPGTVKLADFGSAS 163 (307)
T ss_pred CCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECCCCCEEEeecCcce
Confidence 778899999996 56766664 3456899999999999999999999855 9999999999999999999999999987
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
..... ....|++.|+|||++.......++.++||||||+++|+|++|..||........... +.....
T Consensus 164 ~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~---~~~~~~ 231 (307)
T cd06607 164 LVSPA---------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQNDS 231 (307)
T ss_pred ecCCC---------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH---HhcCCC
Confidence 65322 123688899999988544344588899999999999999999999976655443321 111111
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
...+ ...++..+.+||.+||..+|.+||++.+++.||||...
T Consensus 232 ~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 232 PTLS-SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred CCCC-chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 1111 23478899999999999999999999999999999764
No 188
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-39 Score=352.29 Aligned_cols=270 Identities=26% Similarity=0.388 Sum_probs=226.1
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
.....-|..++.||-|+||+|.++....+...||.|.+... +......+.|+..|..||...+.++||+||..|+
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKa----DVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ- 699 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKA----DVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ- 699 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHH----HHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec-
Confidence 45567789999999999999999998899999999987543 2334456788999999999999999999999997
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
|++++|+||+|++||++..+|.+-+.|.+..++.++.++.+|+.++|..| +|||||||+|||||.+|++||+|||||.
T Consensus 700 DkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrdGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 700 DKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCT 777 (1034)
T ss_pred cCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcc--ceecccCccceEEccCCceeeeeccccc
Confidence 89999999999999999999999999999999999999999999999976 9999999999999999999999999996
Q ss_pred ccccCcC-----------CCcccc--------------------------cccCCCCCccCCcccccccCCCCCCchhHH
Q 005678 559 IVEDDVG-----------SQGMEL--------------------------TSQGAGTYWYLPPECFELSKTPLISSKVDV 601 (683)
Q Consensus 559 ~~~~~~~-----------~~~~~l--------------------------~~~~~GT~~Y~APE~~~~~~~~~~s~ksDV 601 (683)
-+..... ...|++ ....+||+.|+|||++...+ |+..+|+
T Consensus 778 GfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g---~~q~cdw 854 (1034)
T KOG0608|consen 778 GFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG---YTQLCDW 854 (1034)
T ss_pred cceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC---ccccchh
Confidence 4422110 011111 11247999999999997554 8999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCccc
Q 005678 602 WSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPD---VLTLAQDPYL 678 (683)
Q Consensus 602 WSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS---~~eLl~hP~l 678 (683)
||.|||||+|+.|+.||......+..+. .+.+...+.++....+|.++.++|.++++ ++++|.- ..++-.||||
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq~k--v~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfF 931 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQYK--VINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFF 931 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcceee--eeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccc
Confidence 9999999999999999987766554433 33455667888888999999999998765 7888873 6679999999
Q ss_pred CCC
Q 005678 679 TYS 681 (683)
Q Consensus 679 ~~~ 681 (683)
+..
T Consensus 932 kgI 934 (1034)
T KOG0608|consen 932 KGI 934 (1034)
T ss_pred ccc
Confidence 864
No 189
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.5e-38 Score=328.24 Aligned_cols=255 Identities=27% Similarity=0.482 Sum_probs=200.1
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCC--c
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQ--N 481 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~--~ 481 (683)
|.+++.||.|+||.||+|.+..++..||||.+........ .....+|+.++.++. ||||++++++|. +. +
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~------~~~~~~e~~~l~~l~~h~~i~~~~~~~~-~~~~~ 73 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE------QVNNLREIQALRRLSPHPNILRLIEVLF-DRKTG 73 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch------hhhHHHHHHHHhhcCCCCCccceEEEEe-cCCCC
Confidence 6788999999999999999999999999998754322111 123457888898885 999999999986 44 7
Q ss_pred eEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+++||||+++ +|...+.. ...+++..+..++.|++.||.|||..+ |+|+||+|.||+++. +.+||+|||++..+
T Consensus 74 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 74 RLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD-DILKLADFGSCRGI 149 (282)
T ss_pred cEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC-CCeEEEeccccccc
Confidence 89999999964 77777754 457899999999999999999999865 999999999999999 99999999999876
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH-----
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK----- 635 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~----- 635 (683)
..... .....+++.|+|||++... ..++.++|||||||++|+|++|..||......+.+........
T Consensus 150 ~~~~~------~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (282)
T cd07831 150 YSKPP------YTEYISTRWYRAPECLLTD--GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAE 221 (282)
T ss_pred ccCCC------cCCCCCCcccCChhHhhcC--CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 43321 1123688999999986433 2368899999999999999999999976655443222111100
Q ss_pred ---------hhccCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 ---------ARKVEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 ---------~~~~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....++. .+.++..+.+||.+||.++|.+||++.++++||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 222 VLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred HHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 00111111 13568999999999999999999999999999997
No 190
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.2e-38 Score=330.37 Aligned_cols=252 Identities=29% Similarity=0.393 Sum_probs=202.4
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecc
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYC 490 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~ 490 (683)
||.|+||+||+|.+..+|+.||||++..... ........+..|+.+++.++||||++++++|. ..+.+|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRL----KKRKGEQMALNEKKILEKVSSRFIVSLAYAFE-TKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhh----hhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe-cCCeEEEEEecC
Confidence 6999999999999999999999998754321 11223445678999999999999999999986 567899999999
Q ss_pred cCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCc
Q 005678 491 SGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 491 ~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
++++|.+++.... .+++..+..++.|++.||.|||+.+ |+|+||+|+|||++.++.++|+|||++........
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--- 150 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK--- 150 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEccCcchhhhccCCc---
Confidence 9999999996554 6899999999999999999999965 99999999999999999999999999876543211
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVS 648 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s 648 (683)
.....|+..|+|||++.... ++.++|||||||++|+|++|+.||.................. .....++.++
T Consensus 151 ---~~~~~~~~~y~~PE~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 222 (277)
T cd05577 151 ---IKGRAGTPGYMAPEVLQGEV---YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--MAVEYPDKFS 222 (277)
T ss_pred ---cccccCCCCcCCHHHhcCCC---CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--ccccCCccCC
Confidence 12336888999999986443 788999999999999999999999765431111110011111 1222334679
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 005678 649 NEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTY 680 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~ 680 (683)
+.+.+||.+||..+|.+|| ++.+++.||||..
T Consensus 223 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 223 PEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred HHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 9999999999999999999 8899999999953
No 191
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.2e-38 Score=328.64 Aligned_cols=259 Identities=30% Similarity=0.504 Sum_probs=201.5
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||.|+||.||+|.+..+++.||||.+........ ...+.+|+.+++.++||||+++++++. +.+.
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 77 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------PFTAIREASLLKDLKHANIVTLHDIIH-TKKT 77 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------chhHHHHHHHHhhCCCcceeeEEEEEe-cCCe
Confidence 579999999999999999999988999999998865432111 124568999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||+++ +|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||.|||++.+|.+||+|||++....
T Consensus 78 ~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 154 (291)
T cd07844 78 LTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISERGELKLADFGLARAKS 154 (291)
T ss_pred EEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcCCCCEEECccccccccC
Confidence 9999999975 899988543 46899999999999999999999865 9999999999999999999999999987543
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH-HHHHHh----
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRE-DTIIKA---- 636 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~-~~i~~~---- 636 (683)
.... ......+++.|+|||++... ..++.++|||||||++|+|++|..||.........+.. ......
T Consensus 155 ~~~~-----~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (291)
T cd07844 155 VPSK-----TYSNEVVTLWYRPPDVLLGS--TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEE 227 (291)
T ss_pred CCCc-----cccccccccccCCcHHhhcC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChh
Confidence 2111 01122568899999987532 23788999999999999999999999765422211110 000000
Q ss_pred -----------hccCCC---------CCcCCC--HHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 637 -----------RKVEFP---------SRPAVS--NEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 637 -----------~~~~~p---------~~~~~s--~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
....++ ..+.++ ..+.++|.+||..+|.+||++.+++.||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 228 TWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000000 012344 788999999999999999999999999998
No 192
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.7e-38 Score=327.79 Aligned_cols=260 Identities=29% Similarity=0.434 Sum_probs=200.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
...|.+.+.||+|+||.||+|.+..++..||||++....... ....+.+|+.+++.++|+||+++++++. +.+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~ 76 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG------VPFTAIREASLLKGLKHANIVLLHDIIH-TKE 76 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC------CcHHHHHHHHHHHhcCCCCEeEEEEEEe-cCC
Confidence 357999999999999999999999999999999985542211 1234568999999999999999999986 667
Q ss_pred eEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+|+||||+. ++|..++. ....+++..+..++.||+.||.|||..+ |+|+||||+|||++.++.++|+|||+++..
T Consensus 77 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 77 TLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred eEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcCCCcEEEecccccccc
Confidence 8999999995 56666654 3456888899999999999999999865 999999999999999999999999998764
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH-HHHH----
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRED-TIIK---- 635 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~-~i~~---- 635 (683)
..... ......+++.|+|||++... ..++.++|||||||++|+|++|..||.........+... ....
T Consensus 154 ~~~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T cd07870 154 SIPSQ-----TYSSEVVTLWYRPPDVLLGA--TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTE 226 (291)
T ss_pred CCCCC-----CCCCccccccccCCceeecC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCCh
Confidence 33211 11223578999999988532 236889999999999999999999997655432222110 0000
Q ss_pred --------hh---ccCCCC-----------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 --------AR---KVEFPS-----------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 --------~~---~~~~p~-----------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.. ...++. ....+..+.+|+.+||..||.+|||+.+++.||||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 227 DTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00 000000 01235789999999999999999999999999997
No 193
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=7.9e-39 Score=348.95 Aligned_cols=259 Identities=23% Similarity=0.361 Sum_probs=203.4
Q ss_pred cccccccceeEEEEecccCceEEEEEEEccC-----CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCcee
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDLVE-----HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIV 470 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~-----g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV 470 (683)
.|.+..++|.+.+.||+|+||.||+|.+... +..||||++..... ......+.+|+.+++.+ +|||||
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~il~~l~~h~nIv 105 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH------TDEREALMSELKILSHLGQHKNIV 105 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC------HHHHHHHHHHHHHHHhhccCCcee
Confidence 4456677899999999999999999986443 35799999854422 11245688999999999 899999
Q ss_pred eeccccccCCceEEEEEecccCCChhHHHhcC------------------------------------------------
Q 005678 471 RLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT------------------------------------------------ 502 (683)
Q Consensus 471 ~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~------------------------------------------------ 502 (683)
+++++|. ..+.+|+|||||++|+|.+++...
T Consensus 106 ~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (374)
T cd05106 106 NLLGACT-HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEM 184 (374)
T ss_pred eEeeEec-CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccccccc
Confidence 9999986 667899999999999999988432
Q ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 503 ----------------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 503 ----------------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..+++..+..|+.||+.||.|||+.+ |+||||||.|||++.++.+||+|||+++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--iiHrDLkp~Nil~~~~~~~kL~DfGla~~~ 262 (374)
T cd05106 185 RPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN--CIHRDVAARNVLLTDGRVAKICDFGLARDI 262 (374)
T ss_pred CCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--EEeccCchheEEEeCCCeEEEeeceeeeec
Confidence 24778889999999999999999965 999999999999999999999999999765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
..... ........+++.|+|||++... .++.++|||||||++|+|++ |..||........+.. .+ ....
T Consensus 263 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~--~~--~~~~ 332 (374)
T cd05106 263 MNDSN---YVVKGNARLPVKWMAPESIFDC---VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK--MV--KRGY 332 (374)
T ss_pred cCCcc---eeeccCCCCccceeCHHHhcCC---CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH--HH--Hccc
Confidence 43211 1112223456789999988643 38999999999999999997 9999976544332221 11 1112
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
..+.+..++.++.++|.+||..+|.+|||+.++++
T Consensus 333 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 333 QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 22333457899999999999999999999999875
No 194
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.6e-38 Score=339.68 Aligned_cols=267 Identities=26% Similarity=0.413 Sum_probs=206.5
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID- 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d- 479 (683)
+.++|.+.+.||+|+||.||+|.+..+|..||||.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE------HQTFCQRTLREIKILRRFKHENIIGILDIIRPPS 76 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc------cchhHHHHHHHHHHHHhCCCCCcCchhheeeccc
Confidence 4578999999999999999999999999999999874321 112345677899999999999999999876432
Q ss_pred ---CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 480 ---QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 480 ---~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
...+|+|+||++ ++|..++... .+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||+
T Consensus 77 ~~~~~~~~lv~e~~~-~~l~~~~~~~-~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 77 FESFNDVYIVQELME-TDLYKLIKTQ-HLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ccccceEEEEehhcc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEECcccc
Confidence 245899999995 5888887654 5999999999999999999999965 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH---
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI--- 633 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i--- 633 (683)
+.......... .......||+.|+|||.+... ..++.++|||||||++|+|++|+.||........+.....+
T Consensus 153 ~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~ 228 (336)
T cd07849 153 ARIADPEHDHT--GFLTEYVATRWYRAPEIMLNS--KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT 228 (336)
T ss_pred eeecccccccc--CCcCCcCcCCCccChHHhhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 98664332111 122334789999999986432 23788999999999999999999999655432221110000
Q ss_pred ---------HH------hhccCCC-------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 634 ---------IK------ARKVEFP-------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 634 ---------~~------~~~~~~p-------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.. ....... ..+.++..+.+||.+||..+|.+||++.+++.||||...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred CCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 00 0000000 013567889999999999999999999999999999754
No 195
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7.2e-39 Score=344.16 Aligned_cols=260 Identities=24% Similarity=0.378 Sum_probs=206.0
Q ss_pred ccccccceeEEEEecccCceEEEEEEEc-----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceee
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDL-----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVR 471 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~-----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~ 471 (683)
|.+..++|.+.+.||.|+||.||+|.+. .+++.||+|++..... ......+..|+.++.++ .||||++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~E~~~~~~l~~h~niv~ 75 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT------ASEYKALMTELKILIHIGHHLNVVN 75 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC------HHHHHHHHHHHHHHHhhccCcchhh
Confidence 6677889999999999999999999643 3457899998854321 12245678899999999 8999999
Q ss_pred eccccccCCceEEEEEecccCCChhHHHhcC-------------------------------------------------
Q 005678 472 LWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT------------------------------------------------- 502 (683)
Q Consensus 472 L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~------------------------------------------------- 502 (683)
++++|......++++|||+++++|.+++...
T Consensus 76 ~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (337)
T cd05054 76 LLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD 155 (337)
T ss_pred eeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence 9998876777899999999999999998431
Q ss_pred ------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCccc
Q 005678 503 ------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGME 570 (683)
Q Consensus 503 ------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~ 570 (683)
..+++..+..++.||+.||.|||+.+ |+||||||.|||++.++.++|+|||++..+...... .
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~---~ 230 (337)
T cd05054 156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---V 230 (337)
T ss_pred cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEeCCCcEEEeccccchhcccCcch---h
Confidence 25789999999999999999999865 999999999999999999999999999876432111 1
Q ss_pred ccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCH
Q 005678 571 LTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSN 649 (683)
Q Consensus 571 l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~ 649 (683)
......++..|+|||++.... ++.++|||||||++|+|++ |..||......+.+.. .+... .....+..++.
T Consensus 231 ~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~ 303 (337)
T cd05054 231 RKGDARLPLKWMAPESIFDKV---YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR--RLKEG--TRMRAPEYATP 303 (337)
T ss_pred hccCCCCCccccCcHHhcCCC---CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHH--HHhcc--CCCCCCccCCH
Confidence 122335677899999886443 8999999999999999997 9999976443332211 11111 12222346788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 650 EAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 650 el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
++.+++.+||..+|++||++.++++|
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999999999999875
No 196
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.9e-38 Score=328.61 Aligned_cols=253 Identities=26% Similarity=0.367 Sum_probs=203.5
Q ss_pred cceeEEEEecccCceEEEEEEEccCC-----eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEH-----RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g-----~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
+.|.+.+.||+|+||.||+|.+...+ ..||+|.+..... ......+.+|+.++..++||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~------~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~ 78 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE------PKVQQEFRQEAELMSDLQHPNIVCLLGVCT 78 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC------HHHHHHHHHHHHHHHhcCCcccceEEEEEc
Confidence 46888999999999999999876555 6899998754321 122456889999999999999999999886
Q ss_pred cCCceEEEEEecccCCChhHHHhcC----------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcce
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT----------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNV 541 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NI 541 (683)
+....|++|||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||+||
T Consensus 79 -~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Ni 155 (283)
T cd05048 79 -KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNC 155 (283)
T ss_pred -CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceE
Confidence 667889999999999999999654 45788899999999999999999965 99999999999
Q ss_pred EeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 005678 542 LFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGH 620 (683)
Q Consensus 542 LLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~ 620 (683)
|++.++.++|+|||++........ ........+++.|+|||.+.... ++.++|||||||++|+|++ |..||..
T Consensus 156 l~~~~~~~~L~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~sDv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05048 156 LVGEGLTVKISDFGLSRDIYSADY---YRVQSKSLLPVRWMPPEAILYGK---FTTESDIWSFGVVLWEIFSYGLQPYYG 229 (283)
T ss_pred EEcCCCcEEECCCcceeecccccc---ccccCCCcccccccCHHHhccCc---CchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999986543211 12233446788999999886443 7899999999999999997 9999976
Q ss_pred CchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 621 DQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 621 ~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
....+... .+.. ....+.+..++.++.+|+.+||..+|.+||++.+++++
T Consensus 230 ~~~~~~~~---~i~~--~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 230 FSNQEVIE---MIRS--RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCHHHHHH---HHHc--CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 55543221 1111 12223345789999999999999999999999999864
No 197
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.4e-38 Score=339.80 Aligned_cols=270 Identities=26% Similarity=0.417 Sum_probs=211.7
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc---
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI--- 478 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~--- 478 (683)
..+|.+.+.||.|+||.||+|.+..++..||||.+...... ......+.+|+.+++.++||||++++++|..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV-----PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc-----ccchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 46899999999999999999999999999999987543211 1234567789999999999999999998753
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
....+++||||+. ++|..++.....+++..+..++.||+.||.|||..+ |+|+||||+|||++.+|.+||+|||++.
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 79 DFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred CCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEecccccce
Confidence 3457899999995 689999977777999999999999999999999865 9999999999999999999999999997
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH------
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT------ 632 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~------ 632 (683)
........ .........|+.+|+|||++... ..++.++|||||||++|+|++|+.||........+.....
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~ 232 (334)
T cd07855 156 GLSSSPTE-HKYFMTEYVATRWYRAPELLLSL--PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS 232 (334)
T ss_pred eecccCcC-CCcccccccccccccChHHhcCC--cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence 76443211 11112234789999999987542 2378899999999999999999999976554332211000
Q ss_pred -----------H---HHhhc--cCCC---CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 633 -----------I---IKARK--VEFP---SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 633 -----------i---~~~~~--~~~p---~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
+ ..... ...+ ..+.++.++.+||.+||..+|.+||++.+++.||||...+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~ 301 (334)
T cd07855 233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH 301 (334)
T ss_pred hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence 0 00000 0000 0145789999999999999999999999999999997543
No 198
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.5e-38 Score=320.72 Aligned_cols=254 Identities=27% Similarity=0.506 Sum_probs=207.5
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||+|.+..++..||+|.+........ ....+.+|+.+++.++||||+++++.+. +...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----~~~~~~~E~~~l~~~~h~~i~~~~~~~~-~~~~~ 74 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVK-----EKEASKKEVILLAKMKHPNIVTFFASFQ-ENGRL 74 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccch-----hhHHHHHHHHHHHhCCCCChhhhhheec-cCCeE
Confidence 58899999999999999999999999999998755322111 1345678999999999999999999886 67789
Q ss_pred EEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-cEEEEecCCcccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG-VAKVTDFGLSKIV 560 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g-~vKL~DFGls~~~ 560 (683)
++|+||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||.||++++++ .++|+|||.+...
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152 (257)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcCCCCeEEecccccchhc
Confidence 9999999999999999653 25789999999999999999999865 99999999999999875 4699999999766
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
.... .......|++.|+|||++.... ++.++|||||||++|+|++|..||........+.. +. ....
T Consensus 153 ~~~~-----~~~~~~~~~~~~~ape~~~~~~---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~--~~~~ 219 (257)
T cd08225 153 NDSM-----ELAYTCVGTPYYLSPEICQNRP---YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLK---IC--QGYF 219 (257)
T ss_pred cCCc-----ccccccCCCccccCHHHHcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH---Hh--cccC
Confidence 4321 1122346899999999876443 78899999999999999999999976654443321 11 1111
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.+..+.++..+.++|.+||..+|++||++.+++.||||
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 220 APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 22345688999999999999999999999999999997
No 199
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7e-38 Score=321.95 Aligned_cols=262 Identities=27% Similarity=0.412 Sum_probs=210.2
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-Cc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-QN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-~~ 481 (683)
..|.+.+.||+|+||.||+|.+..++..||+|.+....... ........+.+|+.+++.++||||+++++++... .+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 79 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQ--ETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEK 79 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccc--hhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCC
Confidence 46899999999999999999999999999999875432111 1123356788999999999999999999988533 45
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++|+||+++++|.+++...+.+++..+..++.+|+.||.|||+.+ |+|+||||+||+++.++.++|+|||++....
T Consensus 80 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 80 KLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 68899999999999999987777999999999999999999999865 9999999999999999999999999998654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
...... .......|+..|+|||++.... ++.++|||||||++|+|++|+.||........+... . ......
T Consensus 158 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~-~~~~~~ 228 (264)
T cd06653 158 TICMSG--TGIKSVTGTPYWMSPEVISGEG---YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKI---A-TQPTKP 228 (264)
T ss_pred cccccC--ccccccCCcccccCHhhhcCCC---CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHH---H-cCCCCC
Confidence 321110 0112346899999999986543 788999999999999999999999876554433221 1 111111
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
..+..+++.+.+||.+||. +|..||++.+++.|||.
T Consensus 229 ~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 229 MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 1235688999999999999 68999999999999995
No 200
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.4e-38 Score=324.29 Aligned_cols=260 Identities=28% Similarity=0.456 Sum_probs=214.2
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCCc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~~ 481 (683)
++|.+.+.||.|+||.||+|.+..++..||+|++....... ......+.+|+.++..+. ||||++++++|. +.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK----EKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-DEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccc----hHHHHHHHHHHHHHHhcccCCCchhHHHHhc-CCc
Confidence 46899999999999999999999999999999986533221 122356788999999998 999999999986 677
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++||||+++++|.+++...+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+|.++|+|||++....
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 89999999999999999988878999999999999999999999865 9999999999999999999999999998665
Q ss_pred cCcCCC---------------cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHH
Q 005678 562 DDVGSQ---------------GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQER 626 (683)
Q Consensus 562 ~~~~~~---------------~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~ 626 (683)
...... .........|+..|+|||++.... ++.++||||||+++|+|++|..||........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~---~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 230 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP---AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT 230 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC---CChhhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 432110 012233446889999999876433 78899999999999999999999987654332
Q ss_pred HHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCccc
Q 005678 627 ILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDV----LTLAQDPYL 678 (683)
Q Consensus 627 il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~----~eLl~hP~l 678 (683)
+. .+ . ......+..++..+.+||.+||..+|.+||++ .++++||||
T Consensus 231 ~~---~~-~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 231 FQ---KI-L--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HH---HH-H--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 21 11 1 22333335679999999999999999999999 999999997
No 201
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.4e-38 Score=316.17 Aligned_cols=258 Identities=33% Similarity=0.479 Sum_probs=212.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC--c
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ--N 481 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~--~ 481 (683)
+|.+.+.||.|+||.||+|.+..++..|++|++...... ......+.+|+.++++++||||+++++.+. +. .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-----EEELEALEREIRILSSLQHPNIVRYYGSER-DEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-----hHHHHHHHHHHHHHHHcCCCCEeeEEEEEe-cCCCC
Confidence 478889999999999999999889999999998654322 234567889999999999999999999886 44 7
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.+++|+||+++++|.+++.....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 89999999999999999987778999999999999999999999955 9999999999999999999999999998776
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
..... .......++..|+|||.+.... ++.++||||||+++|+|++|..||........... .+. ......
T Consensus 153 ~~~~~---~~~~~~~~~~~y~~pE~~~~~~---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~-~~~~~~ 223 (260)
T cd06606 153 DIETG---EGTGSVRGTPYWMAPEVIRGEE---YGRAADIWSLGCTVIEMATGKPPWSELGNPMAALY--KIG-SSGEPP 223 (260)
T ss_pred ccccc---ccccCCCCCccccCHhhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH--hcc-ccCCCc
Confidence 54221 0122346889999999886544 78999999999999999999999977652222211 111 001111
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
..+..++..+.+||.+||..+|.+||++.+++.||||
T Consensus 224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 224 EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 2234678999999999999999999999999999997
No 202
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.3e-38 Score=326.64 Aligned_cols=258 Identities=21% Similarity=0.350 Sum_probs=202.6
Q ss_pred ccccccceeEEEEecccCceEEEEEEEc-----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeee
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDL-----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRL 472 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~-----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L 472 (683)
|.+..++|.+.+.||+|+||.||+|.+. .++..||||.+..... ......+.+|+.+++.++||||+++
T Consensus 1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~~~~~~~~~e~~~l~~l~~~~iv~~ 74 (277)
T cd05062 1 WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS------MRERIEFLNEASVMKEFNCHHVVRL 74 (277)
T ss_pred CcccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC------HHHHHHHHHHHHHHHhCCCCCeeeE
Confidence 5677889999999999999999999764 2457899998743211 1123468899999999999999999
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcC----------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceE
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKAT----------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVL 542 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~----------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NIL 542 (683)
++++. +....++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||||+|||
T Consensus 75 ~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil 151 (277)
T cd05062 75 LGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCM 151 (277)
T ss_pred EEEEc-CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEE
Confidence 99986 667899999999999999998542 23577888999999999999999865 999999999999
Q ss_pred eCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 005678 543 FDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHD 621 (683)
Q Consensus 543 Ld~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~ 621 (683)
+++++.++|+|||++......... .......+++.|+|||.+.... ++.++|||||||++|+|++ |..||...
T Consensus 152 ~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~~~~~p~~~~ 225 (277)
T cd05062 152 VAEDFTVKIGDFGMTRDIYETDYY---RKGGKGLLPVRWMSPESLKDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGM 225 (277)
T ss_pred EcCCCCEEECCCCCccccCCccee---ecCCCCccCHhhcChhHhhcCC---cCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999998765432111 1112235678899999986433 7899999999999999998 78999765
Q ss_pred chHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 622 QTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 622 ~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
...... . .+..... .+....++..+.+||.+||..+|.+||++.+++++
T Consensus 226 ~~~~~~-~--~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 226 SNEQVL-R--FVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CHHHHH-H--HHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 543222 1 1111111 12234688899999999999999999999999864
No 203
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=346.52 Aligned_cols=260 Identities=28% Similarity=0.439 Sum_probs=220.1
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+..-|.+.+.||+|.|..|-+|.+..+|..||||++....... ....++..|+..|+-++|||||+||.+.. ..
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-----~st~hlfqEVRCMKLVQHpNiVRLYEViD-TQ 89 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-----LSTGHLFQEVRCMKLVQHPNIVRLYEVID-TQ 89 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-----hhhhHHHHHHHHHHHhcCcCeeeeeehhc-cc
Confidence 3456888999999999999999999999999999987664322 22468899999999999999999999976 45
Q ss_pred ceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC-CCCcEEEEecCCcc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD-EFGVAKVTDFGLSK 558 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd-~~g~vKL~DFGls~ 558 (683)
..+|||+|+-.+|+|++||-++ ..+.+..+..++.||+.|+.|+|+. .+|||||||+||++- .-|-+||+|||++.
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL--HVVHRDLKPENVVFFEKlGlVKLTDFGFSN 167 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL--HVVHRDLKPENVVFFEKLGLVKLTDFGFSN 167 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh--hhhcccCCcceeEEeeecCceEeeeccccc
Confidence 6789999999999999999544 5699999999999999999999985 599999999999876 57899999999997
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
.+.... .....+|+..|-|||++.+... --+.+||||||||||.|+||++||....+.+.+ +++..-+
T Consensus 168 kf~PG~------kL~TsCGSLAYSAPEILLGDsY--DAPAVDiWSLGVILyMLVCGq~PFqeANDSETL----TmImDCK 235 (864)
T KOG4717|consen 168 KFQPGK------KLTTSCGSLAYSAPEILLGDSY--DAPAVDIWSLGVILYMLVCGQPPFQEANDSETL----TMIMDCK 235 (864)
T ss_pred cCCCcc------hhhcccchhhccCchhhhcCcc--CCcchhhhHHHHHHHHHHhCCCccccccchhhh----hhhhccc
Confidence 665431 2234589999999999986652 246799999999999999999999877766654 3455555
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
+..| ..+|.+|++||.+||..||.+|.++++|..++|++...
T Consensus 236 YtvP--shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 236 YTVP--SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred ccCc--hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 5555 47999999999999999999999999999999998753
No 204
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.2e-38 Score=328.82 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=197.4
Q ss_pred EecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHH---HHHhhcCCCceeeeccccccCCceEEEE
Q 005678 410 LLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREY---NIHKTLVHHHIVRLWDTFEIDQNTFCTV 486 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi---~il~~L~HpnIV~L~~~f~~d~~~~~LV 486 (683)
.||+|+||.||++.+..++..||||.+.......... ...+.+|. .++....||||+.++++|. ..+.+++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG----ETLALNERIMLSLVSTGDCPFIVCMTYAFH-TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH----HHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-cCCeEEEE
Confidence 4899999999999999999999999876543221111 11223333 3444457999999999886 56789999
Q ss_pred EecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCC
Q 005678 487 LEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGS 566 (683)
Q Consensus 487 ~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~ 566 (683)
|||+++++|..++...+.+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.......
T Consensus 76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 999999999999988888999999999999999999999965 9999999999999999999999999987543221
Q ss_pred CcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcC
Q 005678 567 QGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPA 646 (683)
Q Consensus 567 ~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~ 646 (683)
.....||+.|+|||.+... ..++.++|||||||++|+|++|..||.......... ....... .....++.
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~--~~~~~~~~ 221 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKG--TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--VNVELPDS 221 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCC--CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhhc--CCcCCccc
Confidence 1223689999999987532 237889999999999999999999996543221111 1111111 12222346
Q ss_pred CCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 647 VSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 647 ~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
++.++.+||.+||..||.+|| ++.++++||||+..
T Consensus 222 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 222 FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 899999999999999999999 69999999999863
No 205
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.4e-38 Score=321.85 Aligned_cols=251 Identities=29% Similarity=0.435 Sum_probs=201.3
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHH-HhhcCCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNI-HKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~i-l~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||.|+||.||+|.+..++..||||++...... .......+..|..+ .....||||++++++|. ..+.+|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI----AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-SKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh----HHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-cCCeEEEEE
Confidence 5689999999999999899999999987543211 11122334445444 44568999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++...+.+++..+..++.||+.||.|||+.+ |+|+||+|.|||++.++.++|+|||++.....
T Consensus 77 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 77 EYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred eccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 99999999999988778999999999999999999999865 99999999999999999999999999875432
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC--CCc
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP--SRP 645 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p--~~~ 645 (683)
.....|++.|+|||.+.... ++.++||||||+++|+|++|..||........+.. .......++ ...
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 218 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVG---DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDN----ILSRRINWPEEVKE 218 (260)
T ss_pred ----cccCCCCcCccChhhhcCCC---CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhcccCCCCcccc
Confidence 12236889999999986443 78899999999999999999999976655432221 112222232 223
Q ss_pred CCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccCCCC
Q 005678 646 AVSNEAKDLIRRCLTYNQAERP---DVLTLAQDPYLTYSK 682 (683)
Q Consensus 646 ~~s~el~dLI~rCL~~dP~kRP---S~~eLl~hP~l~~~K 682 (683)
.++..+.+||.+||..+|++|| ++.+++.||||...|
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 5889999999999999999999 558999999998754
No 206
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.7e-38 Score=338.40 Aligned_cols=266 Identities=23% Similarity=0.402 Sum_probs=209.1
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+..+|.+.+.||+|+||.||+|.+..++..||||.+....... .....+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~ 77 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR-----IDAKRTLREIKLLRHLDHENVIAIKDIMPPPH 77 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc-----chhHHHHHHHHHHHhcCCCCccchHHheeccc
Confidence 4568999999999999999999999999999999875432111 12345678999999999999999999875322
Q ss_pred ----ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 481 ----NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 481 ----~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
..+|+||||+. ++|..++...+.+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+
T Consensus 78 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 78 REAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred ccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECcCcc
Confidence 35899999995 689999988788999999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH---
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI--- 633 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i--- 633 (683)
+....... .......|+..|+|||.+.... .++.++|||||||++|+|++|..||........+......
T Consensus 155 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 227 (337)
T cd07858 155 ARTTSEKG-----DFMTEYVVTRWYRAPELLLNCS--EYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGS 227 (337)
T ss_pred ccccCCCc-----ccccccccccCccChHHHhcCC--CCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 98764321 1122346889999999875422 2788999999999999999999999765432211110000
Q ss_pred -----------------HHh-hc---cCC-CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 634 -----------------IKA-RK---VEF-PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 634 -----------------~~~-~~---~~~-p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
... .. ..+ ...+.++..+.+||.+||..+|.+||++.++++||||...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 228 PSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred CChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000 00 000 0124688999999999999999999999999999999753
No 207
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.9e-38 Score=326.24 Aligned_cols=257 Identities=24% Similarity=0.461 Sum_probs=208.5
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC---CCceeeeccccccCC
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV---HHHIVRLWDTFEIDQ 480 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~---HpnIV~L~~~f~~d~ 480 (683)
.|.+.+.||.|+||.||+|.+..++..||||.+...... .....+.+|+.+++.+. ||||++++++|. ++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-~~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD------DDVSDIQREVALLSQLRQSQPPNITKYYGSYL-KG 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc------hhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-eC
Confidence 477889999999999999999999999999987654221 12346778999999986 999999999886 67
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..+|+||||+++++|.+++... .+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++...
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 75 PRLWIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred CEEEEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 7899999999999999998765 6899999999999999999999865 999999999999999999999999999876
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......|++.|+|||++.... .++.++|||||||++|+|++|..||........+.. +.......
T Consensus 152 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~--~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~---~~~~~~~~ 221 (277)
T cd06917 152 NQNSS-----KRSTFVGTPYWMAPEVITEGK--YYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMML---IPKSKPPR 221 (277)
T ss_pred CCCcc-----ccccccCCcceeCHHHhccCC--ccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhc---cccCCCCC
Confidence 54321 122336899999999875322 368899999999999999999999976654332211 11111111
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
++. ..++.++.+||.+||..+|.+||++.+++.||||+..
T Consensus 222 ~~~-~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 222 LED-NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred CCc-ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 111 1378899999999999999999999999999999754
No 208
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=8.4e-38 Score=314.05 Aligned_cols=251 Identities=30% Similarity=0.532 Sum_probs=210.4
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
|.+.+.||.|+||.||++.+..++..|++|++..... .....+.+|+.+++.++||||++++++|. .....+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~ 73 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-------EKKEKIINEIQILKKCKHPNIVKYYGSYL-KKDELW 73 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHHHHhCCCCCEeEEEEEEe-cCCeEE
Confidence 7788999999999999999988999999999865432 23467889999999999999999999986 567889
Q ss_pred EEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 485 TVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
+++||+++++|.+++... ..+++..+..++.+++.||.|||..+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 74 l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 74 IVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred EEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 999999999999999765 57999999999999999999999854 999999999999999999999999999876543
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
.. .....|+..|+|||.+.... ++.++||||||+++|+|++|..||............ .......++.
T Consensus 152 ~~------~~~~~~~~~~~~PE~~~~~~---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~ 219 (253)
T cd05122 152 KA------RNTMVGTPYWMAPEVINGKP---YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKI---ATNGPPGLRN 219 (253)
T ss_pred cc------ccceecCCcccCHHHHcCCC---CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---HhcCCCCcCc
Confidence 21 22346889999999986443 788999999999999999999999876544433321 1122223333
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPY 677 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~ 677 (683)
...++..+.+||.+||..+|.+|||+.+++.|||
T Consensus 220 ~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 220 PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 3445899999999999999999999999999999
No 209
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.8e-38 Score=327.54 Aligned_cols=257 Identities=25% Similarity=0.399 Sum_probs=209.9
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|..++.||.|+||.||+|.+..++..||||++..... ......+.+|+.+++.+.||||++++++|. +.+.
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 76 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA------EDEIEDIQQEITVLSQCDSPYVTKYYGSYL-KGTK 76 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCE
Confidence 347778899999999999999988999999998754321 123467889999999999999999999986 6788
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||++|++|.+++... .+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 77 ~~lv~e~~~~~~L~~~i~~~-~l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRAG-PFDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred EEEEEecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence 99999999999999998764 5899999999999999999999855 99999999999999999999999999976643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
... ......|+..|+|||.+.... ++.++|+|||||++|+|++|..||........... +...... .
T Consensus 154 ~~~-----~~~~~~~~~~y~apE~~~~~~---~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~---~~~~~~~--~ 220 (277)
T cd06640 154 TQI-----KRNTFVGTPFWMAPEVIQQSA---YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL---IPKNNPP--T 220 (277)
T ss_pred Ccc-----ccccccCcccccCHhHhccCC---CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh---hhcCCCC--C
Confidence 211 112236888999999886433 78999999999999999999999976554332211 1111111 1
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
....++..+.+||.+||..+|.+||++.+++.||||....
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 1235778999999999999999999999999999998653
No 210
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.7e-38 Score=333.27 Aligned_cols=258 Identities=22% Similarity=0.379 Sum_probs=209.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.+.|.....||.|+||.||++.+..++..||||.+.... ......+.+|+.+++.++||||+++++.|. ..+
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-~~~ 92 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-------QQRRELLFNEVVIMRDYHHENVVDMYNSYL-VGD 92 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-------HHHHHHHHHHHHHHHhCCCCcHHHHHHhee-cCC
Confidence 344555677999999999999998899999999874321 122456788999999999999999999986 677
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
..|+||||+++++|..++... .+++..+..++.||+.||.|||+.+ |+|+||||.|||++.++.++|+|||++....
T Consensus 93 ~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (292)
T cd06658 93 ELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 169 (292)
T ss_pred eEEEEEeCCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEccCcchhhcc
Confidence 899999999999999988654 5899999999999999999999865 9999999999999999999999999987654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.... ......|++.|+|||.+.... ++.++|||||||++|+|++|..||........+.. +.......+
T Consensus 170 ~~~~-----~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~ 238 (292)
T cd06658 170 KEVP-----KRKSLVGTPYWMAPEVISRLP---YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR---IRDNLPPRV 238 (292)
T ss_pred cccc-----cCceeecCccccCHHHHccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCCcc
Confidence 3211 112236899999999885433 78899999999999999999999976554432221 111122233
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+....++..+.+||.+||..+|.+|||+.++++||||...
T Consensus 239 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 239 KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 3344678899999999999999999999999999999854
No 211
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.6e-39 Score=330.61 Aligned_cols=255 Identities=27% Similarity=0.397 Sum_probs=207.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|...+.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||++++++|. ..+.
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 76 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA------EDEIEDIQQEITVLSQCDSPYITRYYGSYL-KGTK 76 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc------hHHHHHHHHHHHHHHcCCCCccHhhhcccc-cCCc
Confidence 346677889999999999999999999999998754321 123457889999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|+||||+++++|..++... .+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++..+..
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 77 LWIIMEYLGGGSALDLLKPG-PLEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred eEEEEEccCCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeCCCCEEEccccccccccC
Confidence 99999999999999998654 5899999999999999999999855 99999999999999999999999999976643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
... ......|+..|+|||++.... ++.++|||||||++|+|++|..||........... +.......
T Consensus 154 ~~~-----~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~---~~~~~~~~-- 220 (277)
T cd06642 154 TQI-----KRNTFVGTPFWMAPEVIKQSA---YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL---IPKNSPPT-- 220 (277)
T ss_pred cch-----hhhcccCcccccCHHHhCcCC---CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh---hhcCCCCC--
Confidence 211 112236889999999986443 78899999999999999999999975443322211 11111111
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
....++..+.+||.+||..+|.+||++.+++.||||..
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 221 LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 12357889999999999999999999999999999863
No 212
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.4e-38 Score=327.48 Aligned_cols=266 Identities=26% Similarity=0.429 Sum_probs=203.1
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC--
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-- 479 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-- 479 (683)
-++|.+...||.|+||.||+|.+..++..||||.+....... .....+.+|+.+++.++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 85 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-----GFPITALREIKILQLLKHENVVNLIEICRTKAT 85 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-----CchhHHHHHHHHHHhCCCCCccceEEEEecccc
Confidence 357999999999999999999999999999999875432211 1123456799999999999999999987532
Q ss_pred -----CceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEe
Q 005678 480 -----QNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTD 553 (683)
Q Consensus 480 -----~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~D 553 (683)
...+++||||+. ++|..++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 86 PYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred cccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECCCCcEEECc
Confidence 245799999995 5888877543 46899999999999999999999965 99999999999999999999999
Q ss_pred cCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Q 005678 554 FGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI 633 (683)
Q Consensus 554 FGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i 633 (683)
||++.......... ........++..|+|||++... ..++.++||||||+++|+|++|+.||..............+
T Consensus 163 fg~~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~ 239 (310)
T cd07865 163 FGLARAFSLSKNSK-PNRYTNRVVTLWYRPPELLLGE--RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQL 239 (310)
T ss_pred CCCcccccCCcccC-CCCccCcccCccccCcHHhcCC--cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 99998765432211 1112334678999999987533 23678999999999999999999999766543322111111
Q ss_pred HHh---------------hccCCCCC-----------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 634 IKA---------------RKVEFPSR-----------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 634 ~~~---------------~~~~~p~~-----------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
... ....++.. ...+..+.+||.+||..||.+||++.++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 100 00011110 1235678899999999999999999999999998
No 213
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.8e-38 Score=329.99 Aligned_cols=260 Identities=24% Similarity=0.374 Sum_probs=201.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCCce
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~~~ 482 (683)
.|.....||+|+||.||++.+..++..||||.+...... .....+.+|+.++.++. ||||+++++++. ..+.
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-~~~~ 77 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE------KEQKRLLMDLDVVMRSSDCPYIVKFYGALF-REGD 77 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh------HHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-cCCc
Confidence 355667899999999999999999999999987643221 22456788999999996 999999999886 5677
Q ss_pred EEEEEecccCCChhHHH-----hcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 483 FCTVLEYCSGKDLDAVL-----KATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L-----~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
.+++|||++ ++|.++. .....+++..+..++.+++.||.|||+. .+|+||||||+|||++.++.++|+|||++
T Consensus 78 ~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 78 CWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE-LKIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred EEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc-CCeeccCCCHHHEEEccCCcEEEeecchh
Confidence 889999995 4655543 2345699999999999999999999974 25999999999999999999999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
..+..... .....|++.|+|||.+.......++.++|||||||++|+|++|..||.........+ ..+....
T Consensus 156 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~~~ 227 (288)
T cd06616 156 GQLVDSIA------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQL--TQVVKGD 227 (288)
T ss_pred HHhccCCc------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHH--hhhcCCC
Confidence 76543211 122368899999999865422348899999999999999999999997544211111 1111111
Q ss_pred ccCCC--CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 638 KVEFP--SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 638 ~~~~p--~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
....+ ....++.++.+||.+||..+|.+||++.+++.||||+.
T Consensus 228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 228 PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 11111 22358899999999999999999999999999999964
No 214
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-40 Score=356.10 Aligned_cols=257 Identities=26% Similarity=0.401 Sum_probs=219.7
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|.-++.||.|+||.||.|+|..+...||||.+..+...+..+ -..++.|+.+|.+++|||++.+-+||- -..+.
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EK----WqDIlKEVrFL~~l~HPntieYkgCyL-re~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK----WQDILKEVRFLRQLRHPNTIEYKGCYL-REHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHH----HHHHHHHHHHHHhccCCCcccccceee-ccchH
Confidence 3555677999999999999999999999999886654433333 457889999999999999999999985 67788
Q ss_pred EEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+|||||| -|+-.+++.- .+++-+-++..|+.+.+.||.|||+++ .||||||.+||||++.|.|||+|||.+.++..
T Consensus 102 WLVMEYC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 102 WLVMEYC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HHHHHHH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 8999999 4577777743 356999999999999999999999965 99999999999999999999999999876643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
...++|||+|||||++.....+.|+-++||||||++-.||.-.++|+........++ .|..+..+.++
T Consensus 179 ---------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY---HIAQNesPtLq 246 (948)
T KOG0577|consen 179 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIAQNESPTLQ 246 (948)
T ss_pred ---------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH---HHHhcCCCCCC
Confidence 344589999999999987777789999999999999999999999998887777665 34455555554
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.+..|..+..||..||.+-|.+|||..+++.|+|+...
T Consensus 247 -s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 247 -SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred -CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 35789999999999999999999999999999998754
No 215
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=6.8e-38 Score=324.17 Aligned_cols=258 Identities=29% Similarity=0.477 Sum_probs=204.4
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||+|.+..++..||||.+...... .....+.+|+.+++.++||||++++++|. +.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 73 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE------GTPSTAIREISLMKELKHENIVRLHDVIH-TENKL 73 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc------cchHHHHHHHHHHHhhcCCCEeeeeeeEe-eCCcE
Confidence 488999999999999999999999999999988654321 11245678999999999999999999986 56788
Q ss_pred EEEEecccCCChhHHHhcC---CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT---PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~---~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
++||||+++ +|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||+||++++++.++|+|||++...
T Consensus 74 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~ 150 (284)
T cd07836 74 MLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINKRGELKLADFGLARAF 150 (284)
T ss_pred EEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence 999999975 888887543 35899999999999999999999865 999999999999999999999999999765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH------
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII------ 634 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~------ 634 (683)
..... ......+++.|+|||++... ..++.++|||||||++|+|++|..||......+.........
T Consensus 151 ~~~~~-----~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (284)
T cd07836 151 GIPVN-----TFSNEVVTLWYRAPDVLLGS--RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTES 223 (284)
T ss_pred cCCcc-----ccccccccccccChHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChh
Confidence 43211 11223678999999987543 236889999999999999999999998765544322111100
Q ss_pred ------Hhh--ccCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 635 ------KAR--KVEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 635 ------~~~--~~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
... ...++. .+.++..+.++|.+||..+|.+||++.++++||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 224 TWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 000 000110 13467889999999999999999999999999998
No 216
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.5e-38 Score=339.64 Aligned_cols=260 Identities=26% Similarity=0.387 Sum_probs=203.9
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+.++|.+.+.||+|+||.||+|.+..++..||||++...... ......+.+|+.+++.++||||++++++|....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN-----VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK 88 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC-----hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence 567899999999999999999999999999999987543211 122345678999999999999999999885332
Q ss_pred -----ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 481 -----NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 481 -----~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
..+|+||||+. ++|...+... +++..+..++.|++.||.|||..+ |+|+||||+|||++.++.+||+|||
T Consensus 89 ~~~~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 89 SLEEFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CccccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCc
Confidence 35799999995 5888887654 899999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH---
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT--- 632 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~--- 632 (683)
++....... ......|++.|+|||++.... ++.++|||||||++|+|++|+.||........+.....
T Consensus 164 ~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 234 (353)
T cd07850 164 LARTAGTSF------MMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLG 234 (353)
T ss_pred cceeCCCCC------CCCCCcccccccCHHHHhCCC---CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcC
Confidence 998664321 122336889999999986443 88999999999999999999999976543322111000
Q ss_pred ----------------HHHhh-------------ccCCCC-----CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 633 ----------------IIKAR-------------KVEFPS-----RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 633 ----------------i~~~~-------------~~~~p~-----~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
..... ...++. ....+..+.+||.+||..||.+||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~ 314 (353)
T cd07850 235 TPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYI 314 (353)
T ss_pred CCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhH
Confidence 00000 000110 11346678999999999999999999999999998
Q ss_pred C
Q 005678 679 T 679 (683)
Q Consensus 679 ~ 679 (683)
.
T Consensus 315 ~ 315 (353)
T cd07850 315 N 315 (353)
T ss_pred h
Confidence 6
No 217
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.8e-38 Score=326.23 Aligned_cols=248 Identities=27% Similarity=0.412 Sum_probs=196.4
Q ss_pred ceeEEEE--ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCC
Q 005678 404 RYALLNL--LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 404 ry~l~~~--LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~ 480 (683)
.|.+.+. ||.|+||.||++.+..++..+|+|++....... .|+.+...+ +||||++++++|. ..
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------------~e~~~~~~~~~h~~iv~~~~~~~-~~ 81 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------------IEPMVHQLMKDNPNFIKLYYSVT-TL 81 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------------hhHHHHHHhhcCCCEEEEEEEEe-cC
Confidence 4445554 599999999999999999999999975432110 022222222 6999999999996 56
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-cEEEEecCCccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG-VAKVTDFGLSKI 559 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g-~vKL~DFGls~~ 559 (683)
+.+|+||||+++++|..++.....+++..+..++.||+.||.|||+.+ |+|+||||.||+++.++ .++|+|||++..
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~l~dfg~~~~ 159 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVLYDRAKDRIYLCDYGLCKI 159 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence 789999999999999999987778999999999999999999999966 99999999999999888 999999999876
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
.... ....|++.|+|||++.... ++.++|||||||++|+|++|..||.......... ..+......
T Consensus 160 ~~~~---------~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~ 225 (267)
T PHA03390 160 IGTP---------SCYDGTLDYFSPEKIKGHN---YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL--ESLLKRQQK 225 (267)
T ss_pred cCCC---------ccCCCCCcccChhhhcCCC---CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH--HHHHHhhcc
Confidence 5432 1236899999999986433 7889999999999999999999997543322111 111111122
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCC-HHHHhcCcccCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPD-VLTLAQDPYLTY 680 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS-~~eLl~hP~l~~ 680 (683)
..+..+.++..+.+||.+||..+|.+||+ +.++++||||.+
T Consensus 226 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 226 KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 22333478999999999999999999995 799999999964
No 218
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.9e-38 Score=326.53 Aligned_cols=262 Identities=27% Similarity=0.449 Sum_probs=205.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||+||+|.+..++..||||.+....... .....+.+|+.+++.++||||+++++++. +...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-----GVPSTAIREISLLKEMQHGNIVRLQDVVH-SEKR 75 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-----cchHHHHHHHHHHHhccCCCEeeEEEEEe-cCCe
Confidence 46899999999999999999999999999999875432211 22356778999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCcEEEEecCCccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGVAKVTDFGLSKI 559 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~vKL~DFGls~~ 559 (683)
+|+||||++ ++|..++.... .+++..+..++.||+.||.|||+.+ |+|+||+|+|||++. ++.+||+|||++..
T Consensus 76 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~~~~~~kl~dfg~~~~ 152 (294)
T PLN00009 76 LYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARA 152 (294)
T ss_pred EEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEECCCCEEEEcccccccc
Confidence 999999995 57888775443 3578888899999999999999865 999999999999985 56799999999976
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh--
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR-- 637 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~-- 637 (683)
..... .......|++.|+|||++... ..++.++|||||||++|+|++|..||......+.+..........
T Consensus 153 ~~~~~-----~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (294)
T PLN00009 153 FGIPV-----RTFTHEVVTLWYRAPEILLGS--RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNE 225 (294)
T ss_pred cCCCc-----cccccCceeecccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 54321 111233678999999987542 237889999999999999999999998766554443211110000
Q ss_pred ---------------ccCCC------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 638 ---------------KVEFP------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 638 ---------------~~~~p------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
...++ ..+.++..+.+||.+||..+|.+||++.+++.||||..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 226 ETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred hhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 00001 12457889999999999999999999999999999974
No 219
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.2e-38 Score=324.70 Aligned_cols=258 Identities=31% Similarity=0.499 Sum_probs=205.3
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
|.+.+.||.|++|.||+|.+..+|..||||++....... .....+.+|+.+++.++||||+++++++. +.+..|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-~~~~~~ 74 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-----GVPSTAIREISLLKELNHPNIVRLLDVVH-SENKLY 74 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-----cchhHHHHHHHHHHhcCCCCccCHhheec-cCCeEE
Confidence 567889999999999999999999999999886543211 12346778999999999999999999986 678899
Q ss_pred EEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 485 TVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+||||+ +++|..++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++.....
T Consensus 75 iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~ 151 (283)
T cd07835 75 LVFEFL-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDREGALKLADFGLARAFGV 151 (283)
T ss_pred EEEecc-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCcEEEeecccccccCC
Confidence 999999 468999987655 6899999999999999999999854 99999999999999999999999999976543
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH--------
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII-------- 634 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~-------- 634 (683)
... ......+++.|+|||++... ..++.++|||||||++|+|++|..||................
T Consensus 152 ~~~-----~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 224 (283)
T cd07835 152 PVR-----TYTHEVVTLWYRAPEILLGS--RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVW 224 (283)
T ss_pred Ccc-----ccCccccccCCCCCceeecC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHh
Confidence 211 11223578899999987542 236889999999999999999999997765543322210000
Q ss_pred ----H--hhccCCC---------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 635 ----K--ARKVEFP---------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 635 ----~--~~~~~~p---------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
. .....++ ..+.++..+.+||.+||..+|.+||++.+++.||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 225 PGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0 0000011 124678899999999999999999999999999998
No 220
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.5e-38 Score=321.53 Aligned_cols=253 Identities=23% Similarity=0.354 Sum_probs=205.2
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
.+....|.+.+.||.|+||.||+|.+..++..||+|++..+. .....+.+|+.++..++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~- 72 (263)
T cd05052 2 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------MEVEEFLKEAAVMKEIKHPNLVQLLGVCT- 72 (263)
T ss_pred CCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--------hHHHHHHHHHHHHHhCCCCChhheEEEEc-
Confidence 445567899999999999999999999999999999875321 11356788999999999999999999886
Q ss_pred CCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
....+++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~df~~ 150 (263)
T cd05052 73 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGL 150 (263)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCcEEeCCCcc
Confidence 567889999999999999999643 45899999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
+........ .......+++.|+|||.+.... ++.++|||||||++|+|++ |..||......+.. . .+..
T Consensus 151 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-~--~~~~ 220 (263)
T cd05052 151 SRLMTGDTY----TAHAGAKFPIKWTAPESLAYNK---FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E--LLEK 220 (263)
T ss_pred cccccccee----eccCCCCCccccCCHHHhccCC---CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-H--HHHC
Confidence 987653311 1111223467899999886443 7889999999999999998 99999765543322 1 1111
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
....+....++.++.++|.+||..+|.+||++.++++
T Consensus 221 --~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 221 --GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred --CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 1223334578999999999999999999999999975
No 221
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-39 Score=357.28 Aligned_cols=254 Identities=26% Similarity=0.435 Sum_probs=211.2
Q ss_pred EEEEecccCceEEEEEEEccCCeEEE---EEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-Cce
Q 005678 407 LLNLLGKGGFSEVYKAYDLVEHRYVA---CKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-QNT 482 (683)
Q Consensus 407 l~~~LGkGgfG~Vyka~d~~~g~~VA---VKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-~~~ 482 (683)
....||+|+|-+||+|+|..+|-.|| ||+-... ........|..|+.+|+.|+|||||++|++|... ...
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~------q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT------QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhh------cChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence 35789999999999999999998887 3322111 1122356889999999999999999999999632 345
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC-CCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD-EFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd-~~g~vKL~DFGls~~~~ 561 (683)
+.+|+|+|.+|+|..|+++++.++.+.+..|++||+.||.|||++.+||||||||.+||||+ ..|.|||+|+|||..+.
T Consensus 118 in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred eeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 88999999999999999999999999999999999999999999999999999999999998 47899999999999886
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.... ....|||.|||||++. ..|+..+||||||++|+||+|+.+||........|++.- ....++.-
T Consensus 198 ~s~a-------ksvIGTPEFMAPEmYE----E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV--~SGiKP~s 264 (632)
T KOG0584|consen 198 KSHA-------KSVIGTPEFMAPEMYE----ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV--TSGIKPAA 264 (632)
T ss_pred cccc-------ceeccCccccChHHHh----hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH--HcCCCHHH
Confidence 5432 2348999999999985 338999999999999999999999999999888887632 22211110
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
-. ..-.+++++||.+||.. ...|||+.+||.||||...
T Consensus 265 l~-kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 265 LS-KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred hh-ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 00 12257899999999998 9999999999999999853
No 222
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.7e-38 Score=318.57 Aligned_cols=257 Identities=30% Similarity=0.444 Sum_probs=209.0
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecc
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYC 490 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~ 490 (683)
||.|+||.||++.+..++..|++|++..... ........+.+|+.++..++||||+++++.+. ....+|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM----IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ-GKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh----hhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-cCcEEEEEEecC
Confidence 6999999999999988899999998754321 12344677889999999999999999999886 677899999999
Q ss_pred cCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC---
Q 005678 491 SGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ--- 567 (683)
Q Consensus 491 ~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~--- 567 (683)
++++|.+++...+.+++..+..++.||+.||.|||..+ |+|+||+|+|||++.++.++|+|||++..........
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 76 PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 99999999987778999999999999999999999865 9999999999999999999999999987654331100
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.........+++.|+|||++.... ++.++||||||+++|+|++|..||........... .......++....+
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~---~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 226 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQG---HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQN----ILNGKIEWPEDVEV 226 (265)
T ss_pred ccccccCcccCccccCHHHhcCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhcCCcCCCccccC
Confidence 000122336888999999886443 78899999999999999999999976664432211 12233444443345
Q ss_pred CHHHHHHHHHhcccCCCCCCCH---HHHhcCcccCCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDV---LTLAQDPYLTYS 681 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~---~eLl~hP~l~~~ 681 (683)
+..+.+||.+||..+|.+||++ .++++||||...
T Consensus 227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred CHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 8999999999999999999999 999999999753
No 223
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.7e-38 Score=323.04 Aligned_cols=257 Identities=23% Similarity=0.374 Sum_probs=204.9
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccC-----CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeee
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVE-----HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRL 472 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~-----g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L 472 (683)
|++..++|.+.+.||.|+||.||+|.+... +..||+|.+..... ......+.+|+.+++.++||||+++
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~~~~~~~~~e~~~l~~~~~~~i~~~ 74 (277)
T cd05032 1 WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS------MRERIEFLNEASVMKEFNCHHVVRL 74 (277)
T ss_pred CccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC------HHHHHHHHHHHHHHHhCCCCceeEE
Confidence 456778999999999999999999987644 48899998754321 1223567889999999999999999
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcC----------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceE
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKAT----------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVL 542 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~----------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NIL 542 (683)
++++. +...+++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||
T Consensus 75 ~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nil 151 (277)
T cd05032 75 LGVVS-TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCM 151 (277)
T ss_pred EEEEc-CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEE
Confidence 99986 567899999999999999999542 23678889999999999999999865 999999999999
Q ss_pred eCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 005678 543 FDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHD 621 (683)
Q Consensus 543 Ld~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~ 621 (683)
++.++.+||+|||+++.+..... ........++..|+|||.+.... ++.++|||||||++|+|++ |..||...
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~el~t~g~~p~~~~ 225 (277)
T cd05032 152 VAEDLTVKIGDFGMTRDIYETDY---YRKGGKGLLPVRWMAPESLKDGV---FTTKSDVWSFGVVLWEMATLAEQPYQGL 225 (277)
T ss_pred EcCCCCEEECCcccchhhccCcc---cccCCCCCccccccCHHHHhcCC---CCcccchHHHHHHHHHhhccCCCCCccC
Confidence 99999999999999986643321 11223346788999999885433 7889999999999999998 99999765
Q ss_pred chHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 622 QTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 622 ~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...... . .+..... .+.+..++..+.+||.+||..+|.+|||+.+++.
T Consensus 226 ~~~~~~-~--~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 226 SNEEVL-K--FVIDGGH--LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CHHHHH-H--HHhcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 543322 1 1122222 2233457899999999999999999999999975
No 224
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.8e-38 Score=330.19 Aligned_cols=263 Identities=23% Similarity=0.417 Sum_probs=201.3
Q ss_pred ceeEEEEecccCceEEEEEEEcc--CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC-
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLV--EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ- 480 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~--~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~- 480 (683)
+|.+.+.||.|+||.||+|.+.. ++..||||.+...... .......+.+|+.+++.++||||++++++|. +.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~ 75 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ----YTGISQSACREIALLRELKHENVVSLVEVFL-EHA 75 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc----ccCccHHHHHHHHHHHhcCCCCccceEEEEe-CCC
Confidence 58899999999999999999888 8999999998664321 1122346778999999999999999999986 44
Q ss_pred -ceEEEEEecccCCChhHHHhcC-----CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC----CCcEE
Q 005678 481 -NTFCTVLEYCSGKDLDAVLKAT-----PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE----FGVAK 550 (683)
Q Consensus 481 -~~~~LV~Ey~~ggsL~~~L~~~-----~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~----~g~vK 550 (683)
..+++||||+++ +|..++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++. ++.+|
T Consensus 76 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 76 DKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred CceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcCCCCccceEE
Confidence 789999999965 676666322 36899999999999999999999865 999999999999998 99999
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHH-----
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQE----- 625 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e----- 625 (683)
|+|||++..+...... ........|+++|+|||++... ..++.++|||||||++|+|++|++||.......
T Consensus 153 l~Dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~ 228 (316)
T cd07842 153 IGDLGLARLFNAPLKP--LADLDPVVVTIWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNP 228 (316)
T ss_pred ECCCccccccCCCccc--ccccCCccccccccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccch
Confidence 9999999876543211 1112234689999999987532 236889999999999999999999996543321
Q ss_pred ----HHHHHHHH------------------H----HhhccCCC---------CCcCCCHHHHHHHHHhcccCCCCCCCHH
Q 005678 626 ----RILREDTI------------------I----KARKVEFP---------SRPAVSNEAKDLIRRCLTYNQAERPDVL 670 (683)
Q Consensus 626 ----~il~~~~i------------------~----~~~~~~~p---------~~~~~s~el~dLI~rCL~~dP~kRPS~~ 670 (683)
.+...... . ......++ .....+..+.++|.+||.+||++|||+.
T Consensus 229 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ 308 (316)
T cd07842 229 FQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAE 308 (316)
T ss_pred hHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHH
Confidence 00000000 0 00000111 0014677899999999999999999999
Q ss_pred HHhcCccc
Q 005678 671 TLAQDPYL 678 (683)
Q Consensus 671 eLl~hP~l 678 (683)
+++.||||
T Consensus 309 eil~~~~f 316 (316)
T cd07842 309 EALEHPYF 316 (316)
T ss_pred HHhcCCCC
Confidence 99999998
No 225
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.2e-38 Score=326.84 Aligned_cols=257 Identities=23% Similarity=0.385 Sum_probs=209.0
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|...+.||.|+||.||++.+..++..|++|.+..... .....+.+|+.+++.+.||||++++++|. ..+..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-~~~~~ 91 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ-------QRRELLFNEVVIMRDYQHPNIVEMYSSYL-VGDEL 91 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch-------hHHHHHHHHHHHHHHcCCCChheEEEEEE-cCCeE
Confidence 34556799999999999999988999999998743211 12345788999999999999999999886 67788
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
|+|+||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 92 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 92 WVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred EEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 999999999999999977 46899999999999999999999865 999999999999999999999999988765432
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
.. ......|++.|+|||.+.... ++.++|||||||++|+|++|..||........... +..........
T Consensus 169 ~~-----~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~---~~~~~~~~~~~ 237 (285)
T cd06648 169 VP-----RRKSLVGTPYWMAPEVISRLP---YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR---IRDNLPPKLKN 237 (285)
T ss_pred Cc-----ccccccCCccccCHHHhcCCC---CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH---HHhcCCCCCcc
Confidence 11 112236899999999886433 78899999999999999999999976554332221 11111222222
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
...++..+.+||.+||..+|.+||++.+++.||||..+.
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 345889999999999999999999999999999998753
No 226
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.5e-38 Score=324.34 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=208.0
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
-|.+++.||.|+||.||+|.+..++..||||++..... ......+.+|+.++..++||||++++++|. +++.+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 77 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA------EDEIEDIQQEITVLSQCDSPYVTKYYGSYL-KDTKL 77 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-eCCeE
Confidence 46778899999999999999988999999998743311 123467889999999999999999999986 67789
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
++||||+++++|..++... .+++..+..++.+++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++..+...
T Consensus 78 ~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 78 WIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EEEEEeCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 9999999999999998754 5899999999999999999999865 999999999999999999999999998766432
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
.. ......|+..|+|||.+.... ++.++|||||||++|+|++|..||........... +....... .
T Consensus 155 ~~-----~~~~~~~~~~y~~PE~~~~~~---~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~--~ 221 (277)
T cd06641 155 QI-----KRNTFVGTPFWMAPEVIKQSA---YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL---IPKNNPPT--L 221 (277)
T ss_pred hh-----hhccccCCccccChhhhccCC---CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH---HhcCCCCC--C
Confidence 11 112236889999999886433 78899999999999999999999976543322211 11111111 1
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
...++.++.++|.+||..+|.+||++.++++||||...
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 23578899999999999999999999999999999754
No 227
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1e-37 Score=325.57 Aligned_cols=264 Identities=22% Similarity=0.380 Sum_probs=206.5
Q ss_pred ccccccceeEEEEecccCceEEEEEEEcc-----CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeee
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLV-----EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRL 472 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~-----~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L 472 (683)
|++..++|.+.+.||+|+||.||+|.+.. .+..||+|.+..... ......+.+|+.+++.++||||+++
T Consensus 1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~ 74 (288)
T cd05061 1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS------LRERIEFLNEASVMKGFTCHHVVRL 74 (288)
T ss_pred CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC------HHHHHHHHHHHHHHHhCCCCCeeeE
Confidence 45677899999999999999999997542 356899998753321 1112357789999999999999999
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcC----------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceE
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKAT----------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVL 542 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~----------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NIL 542 (683)
++++. +.+..|+||||+++|+|.+++... ..++...+..++.||+.||.|||+.+ |+|+||||+|||
T Consensus 75 ~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nil 151 (288)
T cd05061 75 LGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCM 151 (288)
T ss_pred EEEEc-CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEE
Confidence 99886 667899999999999999999642 23466788899999999999999865 999999999999
Q ss_pred eCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 005678 543 FDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHD 621 (683)
Q Consensus 543 Ld~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~ 621 (683)
++.++.++|+|||+++........ .......++..|+|||++.... ++.++|||||||++|+|++ |..||...
T Consensus 152 i~~~~~~~L~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~~pE~~~~~~---~~~~~DvwslG~~l~el~~~~~~p~~~~ 225 (288)
T cd05061 152 VAHDFTVKIGDFGMTRDIYETDYY---RKGGKGLLPVRWMAPESLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGL 225 (288)
T ss_pred EcCCCcEEECcCCccccccccccc---cccCCCcccccccCHHHhccCC---CChHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999865432111 1112234577899999886433 7899999999999999998 78999765
Q ss_pred chHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc------CcccCCC
Q 005678 622 QTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ------DPYLTYS 681 (683)
Q Consensus 622 ~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~------hP~l~~~ 681 (683)
...+ +.. .+...... +....++..+.+||.+||..+|.+|||+.++++ ||||..+
T Consensus 226 ~~~~-~~~--~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 226 SNEQ-VLK--FVMDGGYL--DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred CHHH-HHH--HHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 5433 221 11112122 223457899999999999999999999999986 8998754
No 228
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=6e-38 Score=330.49 Aligned_cols=264 Identities=24% Similarity=0.415 Sum_probs=206.9
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-C
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-Q 480 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-~ 480 (683)
.+.|.+.+.||.|+||.||+|.+..+|..||+|.+....... .....+.+|+.+++.++||||+++++++... .
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-----GIPISSLREITLLLNLRHPNIVELKEVVVGKHL 80 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-----CCcchhhHHHHHHHhCCCCCCcceEEEEecCCC
Confidence 357999999999999999999999999999999876442211 1122456799999999999999999998633 2
Q ss_pred ceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
+.+++||||+. ++|..++.. ...+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++..
T Consensus 81 ~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 81 DSIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred CeEEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccceeee
Confidence 56899999996 588888754 366899999999999999999999966 99999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh---
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA--- 636 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~--- 636 (683)
...... ......+++.|+|||++... ..++.++|||||||++|+|++|..||......+.+.........
T Consensus 158 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 230 (309)
T cd07845 158 YGLPAK-----PMTPKVVTLWYRAPELLLGC--TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNE 230 (309)
T ss_pred cCCccC-----CCCcccccccccChhhhcCC--CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 653211 11223568889999987532 23788999999999999999999999876655443221111000
Q ss_pred ------------hccCCCCC---------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 637 ------------RKVEFPSR---------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 637 ------------~~~~~p~~---------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..+..+.. ..+++.+.+||.+||.+||.+|||+.+++.||||+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 231 SIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred hhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 01111111 235888999999999999999999999999999974
No 229
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.8e-38 Score=332.96 Aligned_cols=253 Identities=22% Similarity=0.328 Sum_probs=202.4
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCe----EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHR----YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~----~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
...|.+.+.||+|+||.||+|.+..++. .||||++..... ......+.+|+.+++.+.||||++++++|.
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~g~~~ 79 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKEILDEAYVMASVDNPHVCRLLGICL 79 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC------HHHHHHHHHHHHHHHhCCCCCCCeEEEEEc
Confidence 3569999999999999999998766655 489998753211 122456888999999999999999999886
Q ss_pred cCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
....++|++|+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 80 --~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~~~~~kl~DfG~ 155 (316)
T cd05108 80 --TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKTPQHVKITDFGL 155 (316)
T ss_pred --CCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecCCCcEEEccccc
Confidence 34577999999999999999764 46889999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
++.+....... ......++..|+|||++.... ++.++|||||||++|+|++ |..||......+ +.. ..
T Consensus 156 a~~~~~~~~~~---~~~~~~~~~~y~apE~~~~~~---~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-~~~----~~ 224 (316)
T cd05108 156 AKLLGADEKEY---HAEGGKVPIKWMALESILHRI---YTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-ISS----IL 224 (316)
T ss_pred cccccCCCcce---eccCCccceeecChHHhccCC---CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-HHH----HH
Confidence 98765432111 111224567899999986443 8999999999999999997 999997654432 211 11
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.....++..+.++.++.++|.+||..+|.+||++.+++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 225 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2233445556788999999999999999999999999875
No 230
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=344.05 Aligned_cols=264 Identities=27% Similarity=0.413 Sum_probs=224.8
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
++-.+.|..-++||+||||+||-+....+|+-||+|.+... ..++.....-++.|-.||..+..|.||.|-.+|+
T Consensus 181 pvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KK----RiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfe- 255 (591)
T KOG0986|consen 181 PVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKK----RIKKRKGETMALNEKQILEKVSSPFIVSLAYAFE- 255 (591)
T ss_pred hccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHH----HHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeec-
Confidence 34456788899999999999999999999999999987443 2344444566889999999999999999988886
Q ss_pred CCceEEEEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
.++.+|+||..|.||+|..+|-..+ .+++..++.++.+|+.||.+||... ||+|||||.|||||+.|++.|+|+||
T Consensus 256 Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~--iVYRDLKPeNILLDd~GhvRISDLGL 333 (591)
T KOG0986|consen 256 TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR--IVYRDLKPENILLDDHGHVRISDLGL 333 (591)
T ss_pred CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc--eeeccCChhheeeccCCCeEeeccce
Confidence 7889999999999999999996554 7999999999999999999999966 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
|.-++... .....+||.+|||||++.... |+..+|+|||||+||+|+-|+.||............+.....
T Consensus 334 Avei~~g~------~~~~rvGT~GYMAPEvl~ne~---Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~ 404 (591)
T KOG0986|consen 334 AVEIPEGK------PIRGRVGTVGYMAPEVLQNEV---YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE 404 (591)
T ss_pred EEecCCCC------ccccccCcccccCHHHHcCCc---ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc
Confidence 98876542 233449999999999997554 999999999999999999999999766554444344444555
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTY 680 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~ 680 (683)
....++ ..+|+++++|.+.+|+.||.+|. .+.++-+||||+.
T Consensus 405 ~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 405 DPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred chhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence 556666 57999999999999999999998 4679999999974
No 231
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.1e-37 Score=319.76 Aligned_cols=254 Identities=27% Similarity=0.480 Sum_probs=203.8
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||||.+....... ......+.+|+.+++.++||||++++++|. +.+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD----AKARQDCVKEIDLLKQLNHPNVIKYLDSFI-EDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC----HHHHHHHHHHHHHHHhCCCcceeeeeeeEE-ECCe
Confidence 46899999999999999999999999999999875432211 223456788999999999999999999986 5678
Q ss_pred EEEEEecccCCChhHHHh----cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 483 FCTVLEYCSGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
+++|+||+++++|.+++. ....+++..+..++.+|+.||.|||+.+ |+|+||||+|||++.++.++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcCCCCEEECccccce
Confidence 899999999999998884 2345899999999999999999999865 9999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
....... ......|++.|+|||.+.... ++.++||||||+++|+|++|..||.........+. ..+ ..
T Consensus 155 ~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~---~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~-~~~---~~ 222 (267)
T cd08228 155 FFSSKTT-----AAHSLVGTPYYMSPERIHENG---YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC-QKI---EQ 222 (267)
T ss_pred eccchhH-----HHhcCCCCccccChhhhccCC---CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH-HHH---hc
Confidence 7653221 112346889999999886443 78899999999999999999999965443211111 111 11
Q ss_pred cCCCC--CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 639 VEFPS--RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 639 ~~~p~--~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
..++. ...++..+.+||.+||..+|.+||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 223 CDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred CCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 12222 12577899999999999999999999999863
No 232
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=333.29 Aligned_cols=257 Identities=29% Similarity=0.409 Sum_probs=211.8
Q ss_pred ccceeEE-EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecccccc-
Q 005678 402 NHRYALL-NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEI- 478 (683)
Q Consensus 402 ~~ry~l~-~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~- 478 (683)
.+.|.+- ++||-|-.|.|..|+.+.++..+|+|++.-. ..+.+|++.+-.. .|||||.++++|+.
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds------------~KARrEVeLHw~~s~h~~iV~IidVyeNs 127 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS------------PKARREVELHWMASGHPHIVSIIDVYENS 127 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC------------HHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence 3445553 6899999999999999999999999987321 3567899888877 59999999999964
Q ss_pred --CCceEEEEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC---CCcEEE
Q 005678 479 --DQNTFCTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE---FGVAKV 551 (683)
Q Consensus 479 --d~~~~~LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~---~g~vKL 551 (683)
....+.+|||+|+||.|...+...+ .++++++..|+.||+.|+.|||+. +|.||||||+|+|+.. |..+||
T Consensus 128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~--nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM--NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc--chhhccCChhheeeecCCCCcceEe
Confidence 3557889999999999999996654 599999999999999999999985 5999999999999974 567999
Q ss_pred EecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Q 005678 552 TDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRED 631 (683)
Q Consensus 552 ~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~ 631 (683)
+|||+|+...... ....++-||+|.|||++...+ |+..+|+||+||++|-||||.+||........--.-.
T Consensus 206 tDfGFAK~t~~~~------~L~TPc~TPyYvaPevlg~eK---ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk 276 (400)
T KOG0604|consen 206 TDFGFAKETQEPG------DLMTPCFTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 276 (400)
T ss_pred cccccccccCCCc------cccCCcccccccCHHHhCchh---cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHH
Confidence 9999998654321 233458899999999986555 8999999999999999999999997544321111111
Q ss_pred HHHHhhccCCCC--CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 632 TIIKARKVEFPS--RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 632 ~i~~~~~~~~p~--~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.-+..+.+.||. |..+|++++++|+.+|..+|.+|.++.+++.|||+...
T Consensus 277 ~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 277 RRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred hHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 234566777775 56899999999999999999999999999999999753
No 233
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1e-37 Score=319.27 Aligned_cols=253 Identities=26% Similarity=0.436 Sum_probs=204.4
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
|.+..+.|.+++.||+|+||.||+|.+ .++..||+|.+..... ....+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~--------~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (261)
T cd05072 1 WEIPRESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTM--------SVQAFLEEANLMKTLQHDKLVRLYAVVT 71 (261)
T ss_pred CcCchHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCch--------hHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 455677899999999999999999985 4567799998754211 1357888999999999999999999886
Q ss_pred cCCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
+.+.+++||||+++++|.+++.. ...+++..+..++.+++.||.|||+.+ ++|+||||+|||++.++.++|+|||
T Consensus 72 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg 148 (261)
T cd05072 72 -KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESLMCKIADFG 148 (261)
T ss_pred -CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecCCCcEEECCCc
Confidence 67788999999999999999954 356888999999999999999999855 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
++........ .......++..|+|||++.... ++.++|||||||++|+|++ |..||........... +
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~---~- 217 (261)
T cd05072 149 LARVIEDNEY----TAREGAKFPIKWTAPEAINFGS---FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA---L- 217 (261)
T ss_pred cceecCCCce----eccCCCccceecCCHHHhccCC---CChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH---H-
Confidence 9987653211 1112234677899999886443 7889999999999999998 9999976554432211 1
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....++....++.++.+||.+||..+|++||++.++.+
T Consensus 218 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 218 -QRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -HcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 122334445578999999999999999999999998864
No 234
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.9e-37 Score=313.82 Aligned_cols=254 Identities=28% Similarity=0.527 Sum_probs=213.2
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||++.+..++..|+||.+...... ......+.+|+.++..++||||+++++++. +.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~ 74 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-----EEALKSIMQEIDLLKNLKHPNIVKYIGSIE-TSDSL 74 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-----HHHHHHHHHHHHHHHhCCCCCccEEEEEEE-eCCEE
Confidence 488899999999999999999889999999998654321 234567899999999999999999999886 56889
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
++||||+++++|.+++.....+++..+..++.+++.||.|||+.+ |+|+||+|.||+++.++.++|+|||++......
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 75 YIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred EEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 999999999999999988788999999999999999999999865 999999999999999999999999999876543
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
... .....|++.|+|||++.... ++.++||||||+++|+|++|..||............ . .....+.
T Consensus 153 ~~~-----~~~~~~~~~y~~pe~~~~~~---~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~---~--~~~~~~~ 219 (254)
T cd06627 153 SKD-----DASVVGTPYWMAPEVIEMSG---ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRI---V--QDDHPPL 219 (254)
T ss_pred ccc-----ccccccchhhcCHhhhcCCC---CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH---h--ccCCCCC
Confidence 221 12336889999999876433 788999999999999999999999766543333221 1 1122223
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
++.++..+.+||.+||..+|++||++.+++.||||
T Consensus 220 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 220 PEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 35688999999999999999999999999999997
No 235
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.1e-37 Score=324.32 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=199.4
Q ss_pred EecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEec
Q 005678 410 LLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEY 489 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey 489 (683)
.||+|+||.||+|.+..+++.||+|++.......... ............+++...||||+.++++|. +.+.+|+||||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh-HHHHHHHHHHHHHHHhCCCCcEeeeeeeee-cCCEEEEEEec
Confidence 4899999999999999999999999876532221111 111112223344555568999999999986 66789999999
Q ss_pred ccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcc
Q 005678 490 CSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGM 569 (683)
Q Consensus 490 ~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~ 569 (683)
++|++|..++...+.+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.......
T Consensus 79 ~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----- 151 (278)
T cd05606 79 MNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----- 151 (278)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECCCCCEEEccCcCccccCccC-----
Confidence 999999999988888999999999999999999999965 9999999999999999999999999987553221
Q ss_pred cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCH
Q 005678 570 ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSN 649 (683)
Q Consensus 570 ~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~ 649 (683)
.....|++.|+|||++.... .++.++|||||||++|+|++|..||........... ..........+ +..++.
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~--~~~~s~ 224 (278)
T cd05606 152 --PHASVGTHGYMAPEVLQKGV--AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTMAVEL--PDSFSP 224 (278)
T ss_pred --CcCcCCCcCCcCcHHhcCCC--CCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-HHHhhccCCCC--CCcCCH
Confidence 12337999999999986322 378899999999999999999999976532211111 11111122222 345789
Q ss_pred HHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 005678 650 EAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYS 681 (683)
Q Consensus 650 el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~ 681 (683)
.+.++|.+||..+|.+|| ++.++++||||...
T Consensus 225 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 225 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 999999999999999999 99999999999653
No 236
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.6e-38 Score=325.83 Aligned_cols=260 Identities=28% Similarity=0.449 Sum_probs=214.9
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
..+.|.+...||.|+||.||+|.+..++..|++|++..... ....+.+|+.++..++||||++++++|. ..
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~ 87 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--------NKELIINEILIMKDCKHPNIVDYYDSYL-VG 87 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--------hHHHHHHHHHHHHHCCCCCeeEEEEEEE-EC
Confidence 45568888999999999999999988899999999854322 2456788999999999999999999986 56
Q ss_pred ceEEEEEecccCCChhHHHhcCC-CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATP-VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~-~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
+.+++|+||+++++|.+++.... .+++..+..++.+++.||.|||+.+ |+|+||+|.||+++.++.++|+|||++..
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 88 DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 88999999999999999998775 7999999999999999999999855 99999999999999999999999999876
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
...... ......|++.|+|||.+.... ++.++|||||||++|+|++|..||........... +......
T Consensus 166 ~~~~~~-----~~~~~~~~~~y~~PE~~~~~~---~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~---~~~~~~~ 234 (286)
T cd06614 166 LTKEKS-----KRNSVVGTPYWMAPEVIKRKD---YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFL---ITTKGIP 234 (286)
T ss_pred hccchh-----hhccccCCcccCCHhHhcCCC---CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCC
Confidence 543211 112235888999999876433 78899999999999999999999986655433221 1112222
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
.++....++..+.+||.+||..+|.+||++.+++.||||..++
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 235 PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 2333345889999999999999999999999999999999865
No 237
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-37 Score=324.73 Aligned_cols=266 Identities=27% Similarity=0.379 Sum_probs=209.8
Q ss_pred ceeEEEEecccCceEEEEEEEc---cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 404 RYALLNLLGKGGFSEVYKAYDL---VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~---~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
.|.+.+.||.|+||.||.|.+. .+|..||+|++..... ........++.+|+.++..+ .||||++++++|. .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-~ 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI---VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ-T 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh---hhcchHHHHHHHHHHHHHhcccCCChhceeeEee-c
Confidence 3788999999999999999874 4789999999754321 11122345678899999999 5999999999986 5
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
...+|+||||+++++|.+++.....+++..+..++.|++.||.|||+.+ ++|+||+|+|||++.++.+||+|||++..
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 77 DTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred CCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 6788999999999999999987778999999999999999999999865 99999999999999999999999999986
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
...... .......|+..|+|||++.... ..++.++||||||+++|+|++|..||.................. .
T Consensus 155 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~ 227 (290)
T cd05613 155 FHEDEV----ERAYSFCGTIEYMAPDIVRGGD-GGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--S 227 (290)
T ss_pred cccccc----cccccccCCcccCChhhccCCC-CCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--c
Confidence 543211 1122346899999999875422 23678899999999999999999999643222111111111111 1
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERP-----DVLTLAQDPYLTYSK 682 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRP-----S~~eLl~hP~l~~~K 682 (683)
..+.+..++..+.+|+.+||..+|.+|| ++.+++.||||+..+
T Consensus 228 ~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 228 EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 2223356889999999999999999997 899999999998764
No 238
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=324.77 Aligned_cols=260 Identities=24% Similarity=0.404 Sum_probs=217.0
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~ 481 (683)
+....+..||.|+.|.||++..+.+|...|||.+..+.... ..+.++..+.++... ..|+||+.||+|..+.
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nke------e~kRILmDldvv~~s~dcpyIV~c~GyFi~n~- 164 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKE------ENKRILMDLDVVLKSHDCPYIVQCFGYFITNT- 164 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHH------HHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-
Confidence 34456678999999999999999999999999987664422 245677777777665 4899999999997544
Q ss_pred eEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
...|.||.| +..++.+++ -.+++++..+-.+..-+++||.||.++ ++|||||+||+|||||+.|++||||||++..+
T Consensus 165 dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK-H~viHRDvKPSNILlDe~GniKlCDFGIsGrl 242 (391)
T KOG0983|consen 165 DVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK-HGVIHRDVKPSNILLDERGNIKLCDFGISGRL 242 (391)
T ss_pred hHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh-cceeecccCccceEEccCCCEEeeccccccee
Confidence 455889998 556777774 346799999999999999999999875 57999999999999999999999999999877
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
-+... .+..+|.+.|||||.+.....+.|+-.+||||||++++||.||..||.........+. .+.......
T Consensus 243 vdSkA------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~lt--kvln~ePP~ 314 (391)
T KOG0983|consen 243 VDSKA------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLT--KVLNEEPPL 314 (391)
T ss_pred ecccc------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHH--HHHhcCCCC
Confidence 65533 2334899999999999877678899999999999999999999999988776655543 344555666
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
+|....+|+.+.+|+..||..|+.+||.+.+|++|||+.
T Consensus 315 L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 315 LPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred CCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 777677999999999999999999999999999999985
No 239
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.4e-38 Score=333.46 Aligned_cols=266 Identities=27% Similarity=0.403 Sum_probs=211.9
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC---
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ--- 480 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~--- 480 (683)
+|.+.+.||.|+||.||+|.+..++..||||.+...... ....+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD-----LIDAKRILREIKLLRHLRHENIIGLLDILRPPSPED 75 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccccc-----chhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccc
Confidence 588999999999999999999888999999987543211 122457888999999999999999999986433
Q ss_pred -ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 481 -NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 481 -~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
..+|+||+|++ ++|..++.....+++..+..++.+|+.||.|||+.+ |+|+||||.|||++.++.++|+|||++..
T Consensus 76 ~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 76 FNDVYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred ccceEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 47899999996 589999987778999999999999999999999965 99999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh---
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA--- 636 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~--- 636 (683)
....... ........||++|+|||.+.... .++.++||||||+++|+|++|..||......+.+.........
T Consensus 153 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~--~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 228 (330)
T cd07834 153 VDPDEDE--KGFLTEYVVTRWYRAPELLLSSS--RYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSE 228 (330)
T ss_pred ecccccc--cccccccccccCcCCceeeeccc--CCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCCh
Confidence 6543211 01123346899999999986542 3788999999999999999999999776654432211110000
Q ss_pred -----------------hccC----C-CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 637 -----------------RKVE----F-PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 637 -----------------~~~~----~-p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.... + ...+.++..+.+||.+||..+|.+||++.+++.||||...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 0000 0 0013478899999999999999999999999999999754
No 240
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.1e-38 Score=330.56 Aligned_cols=252 Identities=24% Similarity=0.417 Sum_probs=206.1
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEE
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
...||.|+||.||+|.+..++..||||.+..... .....+.+|+.++..+.||||++++++|. .++.+|+||
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-------~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~iv~ 97 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-------QRRELLFNEVVIMRDYQHQNVVEMYKSYL-VGEELWVLM 97 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-------chHHHHHHHHHHHHhCCCCchhhhhhhee-eCCeEEEEE
Confidence 4469999999999999988999999998754321 11345778999999999999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++... .+++..+..++.|++.||.|||+.+ |+|+||||.|||++.++.++|+|||++........
T Consensus 98 e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-- 172 (297)
T cd06659 98 EFLQGGALTDIVSQT-RLNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-- 172 (297)
T ss_pred ecCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEccCCcEEEeechhHhhcccccc--
Confidence 999999999987654 5899999999999999999999865 99999999999999999999999999876543321
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
......|++.|+|||++.... ++.++|||||||++|+|++|..||........... +.......+.....+
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 243 (297)
T cd06659 173 ---KRKSLVGTPYWMAPEVISRTP---YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR---LRDSPPPKLKNAHKI 243 (297)
T ss_pred ---cccceecCccccCHHHHccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HhccCCCCccccCCC
Confidence 112346899999999986433 78899999999999999999999976654443321 111112222233467
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+..+.+||.+||..+|.+||++.++++||||...
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 8899999999999999999999999999999765
No 241
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.1e-38 Score=323.84 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=201.7
Q ss_pred ccceeEEEEecccCceEEEEEEEc-----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDL-----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~-----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
...|.+.+.||.|+||.||+|.+. .++..||||++..... ......+.+|+.+++.+.||||+++++++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 77 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS------NDARKDFEREAELLTNFQHENIVKFYGVC 77 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC------HHHHHHHHHHHHHHHhcCCCCchheeeEE
Confidence 356888999999999999999764 3467899998754321 12346788999999999999999999998
Q ss_pred ccCCceEEEEEecccCCChhHHHhcC--------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceE
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKAT--------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVL 542 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~~--------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NIL 542 (683)
. ....+++||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||+|||
T Consensus 78 ~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nil 154 (280)
T cd05049 78 T-EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCL 154 (280)
T ss_pred e-cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEE
Confidence 6 567899999999999999999654 24788999999999999999999865 999999999999
Q ss_pred eCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 005678 543 FDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHD 621 (683)
Q Consensus 543 Ld~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~ 621 (683)
++.++.++|+|||++..+...... .......+++.|+|||.+.... ++.++|||||||++|+|++ |..||...
T Consensus 155 i~~~~~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~e~~~~g~~p~~~~ 228 (280)
T cd05049 155 VGYDLVVKIGDFGMSRDVYTTDYY---RVGGHTMLPIRWMPPESIMYRK---FTTESDVWSFGVVLWEIFTYGKQPWYGL 228 (280)
T ss_pred EcCCCeEEECCcccceecccCcce---ecCCCCcccceecChhhhccCC---cchhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 999999999999999765332110 1122335678899999986444 8899999999999999998 99999765
Q ss_pred chHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 622 QTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 622 ~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...+... .+. .... .+....++..+.+||.+||..+|.+||++.+++.
T Consensus 229 ~~~~~~~---~~~-~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 229 SNEEVIE---CIT-QGRL-LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CHHHHHH---HHH-cCCc-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 5543221 111 1111 1223468899999999999999999999999875
No 242
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.6e-37 Score=313.93 Aligned_cols=254 Identities=30% Similarity=0.551 Sum_probs=210.4
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||++.+..++..|++|.+...... ......+.+|+.+++.++|||++++++.+. +...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-~~~~~ 74 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-----EKEREDALNEVKILKKLNHPNIIKYYESFE-EKGKL 74 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-----hHHHHHHHHHHHHHHhcCCCChhheEEEEe-cCCEE
Confidence 588999999999999999999889999999998654322 123456788999999999999999999986 56889
Q ss_pred EEEEecccCCChhHHHhcC----CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT----PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~----~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
++|+||+++++|..++... ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~~~~~~l~d~~~~~~ 152 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTSNGLVKLGDFGISKV 152 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcCCCcEEECCccceee
Confidence 9999999999999999653 67999999999999999999999865 99999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
..... .......|++.|+|||.+.... ++.++||||||+++|+|++|..||......... . ......
T Consensus 153 ~~~~~-----~~~~~~~~~~~y~~pe~~~~~~---~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~-~--~~~~~~-- 219 (258)
T cd08215 153 LSSTV-----DLAKTVVGTPYYLSPELCQNKP---YNYKSDIWSLGCVLYELCTLKHPFEGENLLELA-L--KILKGQ-- 219 (258)
T ss_pred cccCc-----ceecceeeeecccChhHhccCC---CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHH-H--HHhcCC--
Confidence 65432 1233347899999999876443 788999999999999999999999766533221 1 111111
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
..+.+..++..+.++|.+||..+|++||++.+++.||||
T Consensus 220 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 220 YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 112223688999999999999999999999999999997
No 243
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.3e-38 Score=337.45 Aligned_cols=265 Identities=18% Similarity=0.300 Sum_probs=202.7
Q ss_pred EEeccc--CceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEE
Q 005678 409 NLLGKG--GFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTV 486 (683)
Q Consensus 409 ~~LGkG--gfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV 486 (683)
..||+| +||+||++.+..+|+.||+|++...... ....+.+.+|+.+++.++||||++++++|. .+..+|+|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-~~~~~~~v 77 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-----EEHLKALQNEVVLSHFFRHPNIMTSWTVFT-TGSWLWVI 77 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-----HHHHHHHHHHHHHHHhCCCCCcceEeeeEe-cCCceEEE
Confidence 346666 9999999999999999999998654321 123567888999999999999999999997 56789999
Q ss_pred EecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCc
Q 005678 487 LEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDV 564 (683)
Q Consensus 487 ~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~ 564 (683)
|||+.+++|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++++|||.+.......
T Consensus 78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~ 155 (328)
T cd08226 78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNG 155 (328)
T ss_pred EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeCCCcEEEechHHHhhhhccC
Confidence 9999999999998654 35899999999999999999999865 9999999999999999999999998654432221
Q ss_pred CCC--cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH---------
Q 005678 565 GSQ--GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI--------- 633 (683)
Q Consensus 565 ~~~--~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i--------- 633 (683)
... .........++..|+|||++.... ..++.++|||||||++|+|++|..||...............
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 156 QKAKVVYDFPQFSTSVLPWLSPELLRQDL-YGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDIT 234 (328)
T ss_pred ccccccccccccccCccCccChhhhcCCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccc
Confidence 111 111111234567799999986432 23788999999999999999999999766544333211000
Q ss_pred --------------------------------HHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 634 --------------------------------IKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 634 --------------------------------~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
........+....++..+.+||++||.+||.+|||+.++++||||...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 000001111223467789999999999999999999999999999876
Q ss_pred C
Q 005678 682 K 682 (683)
Q Consensus 682 K 682 (683)
+
T Consensus 315 ~ 315 (328)
T cd08226 315 K 315 (328)
T ss_pred H
Confidence 5
No 244
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.3e-37 Score=317.50 Aligned_cols=251 Identities=25% Similarity=0.451 Sum_probs=205.3
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||++.+..++..||+|.+..... ......+..|+.+++.++||||++++++|. +.+.+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~ 73 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS------SSAVEDSRKEAVLLAKMKHPNIVAFKESFE-ADGHL 73 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc------hHHHHHHHHHHHHHHhCCCCCcceEEEEEE-ECCEE
Confidence 48899999999999999999999999999998754321 122456778999999999999999999986 67889
Q ss_pred EEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
|+||||+++++|..++.. ...+++..+..++.||+.||.|||+.+ |+|+||||.|||++.++.++|+|||++....
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQNGKVKLGDFGSARLLT 151 (255)
T ss_pred EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECCCCcEEEcccCcceeec
Confidence 999999999999998853 346899999999999999999999865 9999999999999999999999999997664
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
... .......|++.|+|||++.... ++.++|+||||+++|+|++|..||........... +... ...
T Consensus 152 ~~~-----~~~~~~~~~~~~~aPE~~~~~~---~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~---~~~~--~~~ 218 (255)
T cd08219 152 SPG-----AYACTYVGTPYYVPPEIWENMP---YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK---VCQG--SYK 218 (255)
T ss_pred ccc-----cccccccCCccccCHHHHccCC---cCchhhhhhhchhheehhhccCCCCCCCHHHHHHH---HhcC--CCC
Confidence 321 1122346899999999986443 78899999999999999999999976554332211 1111 112
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDP 676 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP 676 (683)
+....++..+.+||.+||..+|.+||++.+++.--
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 219 PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 23346889999999999999999999999998643
No 245
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.5e-38 Score=335.42 Aligned_cols=269 Identities=27% Similarity=0.444 Sum_probs=209.3
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
+.++|.+.+.||.|+||.||+|.+..++..||||.+....... .....+.+|+.++.++ +||||++++++|...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~ 79 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-----TDAQRTFREIMFLQELGDHPNIVKLLNVIKAE 79 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-----hhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence 5678999999999999999999998899999999874321111 1234567899999999 999999999987543
Q ss_pred -CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 480 -QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 480 -~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
...+|+||||++ ++|..++... .+++..+..++.||+.||.|||+.+ |+|+||||+|||++.+|.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 80 NDKDIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred CCceEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 457899999996 5999998766 6899999999999999999999865 9999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH-----
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI----- 633 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i----- 633 (683)
..................||++|+|||.+... ..++.++|||||||++|+|++|+.||...............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGS--TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS 233 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeecc--ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 76544322111222334789999999987532 34688999999999999999999999765543322110000
Q ss_pred ---------------HH-hhccC---C-CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 634 ---------------IK-ARKVE---F-PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 634 ---------------~~-~~~~~---~-p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.. ..... + ...+.++.++.+||.+||..+|.+||++.++++||||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 00 00000 0 011347889999999999999999999999999999964
No 246
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=354.29 Aligned_cols=259 Identities=26% Similarity=0.433 Sum_probs=214.0
Q ss_pred ccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccc
Q 005678 396 NNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDT 475 (683)
Q Consensus 396 ~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~ 475 (683)
.+|.+..+.+.+...||.|.||+||+|.. .-.||||++.......+ ..+.|..|+.++++-+|.||+-+.|+
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~w---hGdVAVK~Lnv~~pt~~-----qlqaFKnEVa~lkkTRH~NIlLFMG~ 456 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRW---HGDVAVKLLNVDDPTPE-----QLQAFKNEVAVLKKTRHENILLFMGA 456 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccc---ccceEEEEEecCCCCHH-----HHHHHHHHHHHHhhcchhhheeeehh
Confidence 67888888999999999999999999953 45799999977654433 47899999999999999999999999
Q ss_pred cccCCceEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEec
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDF 554 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DF 554 (683)
|. .+ .+.||+.||+|.+|+.+|. ....|.....+.|+.||+.|+.|||.++ |||||||..||||++++.|||+||
T Consensus 457 ~~-~p-~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 457 CM-NP-PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred hc-CC-ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEccCCcEEEecc
Confidence 96 33 3489999999999999994 2245889999999999999999999865 999999999999999999999999
Q ss_pred CCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH
Q 005678 555 GLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 555 Gls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~ 634 (683)
||+.......+... ..++.|...|||||++......+|+..+|||||||++|||++|..||. ....+.|+- .
T Consensus 533 GLatvk~~w~g~~q---~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIif----m 604 (678)
T KOG0193|consen 533 GLATVKTRWSGEQQ---LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIF----M 604 (678)
T ss_pred cceeeeeeeccccc---cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEE----E
Confidence 99976544333332 344578899999999998877789999999999999999999999998 444444321 1
Q ss_pred HhhccCCCC----CcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 635 KARKVEFPS----RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 635 ~~~~~~~p~----~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
....+-.|+ ...++.++++|+..||.+++++||.+.+|+.
T Consensus 605 VGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 605 VGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 112222222 2467889999999999999999999988875
No 247
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8.9e-38 Score=325.97 Aligned_cols=260 Identities=27% Similarity=0.453 Sum_probs=205.0
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-Cc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-QN 481 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-~~ 481 (683)
+.|.+.+.||.|+||.||+|.+..++..||||.+...... ......+.+|+.++..++||||+++++++..+ .+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-----EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-----ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCC
Confidence 3688899999999999999999889999999988654322 12234567899999999999999999987532 27
Q ss_pred eEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+|+||||++ ++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||++...
T Consensus 80 ~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 80 KIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNNRGILKICDFGLAREY 156 (293)
T ss_pred cEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCcEEEeecCceeec
Confidence 8999999996 5999888654 45899999999999999999999865 999999999999999999999999999876
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH-----
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK----- 635 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~----- 635 (683)
..... ......+++.|+|||.+.... .++.++|||||||++|+|++|..||........+........
T Consensus 157 ~~~~~-----~~~~~~~~~~~~aPE~~~~~~--~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 229 (293)
T cd07843 157 GSPLK-----PYTQLVVTLWYRAPELLLGAK--EYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEK 229 (293)
T ss_pred cCCcc-----ccccccccccccCchhhcCCc--cccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchH
Confidence 54311 112336789999999875332 368899999999999999999999986655433321111000
Q ss_pred ----------hh--c----------cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 ----------AR--K----------VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 ----------~~--~----------~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.. . ..++. ..+++.+.+||.+||..+|++||++.+++.||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 230 IWPGFSELPGAKKKTFTKYPYNQLRKKFPA-LSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHHHhhccchhcccccccccchhhhccccc-cCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00 0 00110 1158889999999999999999999999999998
No 248
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.5e-37 Score=318.16 Aligned_cols=246 Identities=27% Similarity=0.421 Sum_probs=196.8
Q ss_pred EecccCceEEEEEEE--ccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEE
Q 005678 410 LLGKGGFSEVYKAYD--LVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d--~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
.||+|+||.||+|.+ ..++..||+|++..... .......+..|+.++..+.||||+++++++. ...+++||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN-----DPALKDELLREANVMQQLDNPYIVRMIGICE--AESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC-----cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc--CCCcEEEE
Confidence 589999999999954 45788999998754321 1233567889999999999999999998874 55788999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|.+++.....+++..+..++.|++.||.|||+.+ |+|+||||.|||++.++.+||+|||++..+......
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~- 151 (257)
T cd05116 75 ELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY- 151 (257)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcCCCeEEECCCccccccCCCCCe-
Confidence 99999999999987778999999999999999999999865 999999999999999999999999999876543211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPA 646 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~ 646 (683)
........+++.|+|||++... .++.++|||||||++|+|++ |..||.......... .+.... ..+.++.
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~---~i~~~~--~~~~~~~ 222 (257)
T cd05116 152 -YKAKTHGKWPVKWYAPECMNYY---KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQ---MIESGE--RMECPQR 222 (257)
T ss_pred -eeecCCCCCCccccCHhHhccC---CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHHCCC--CCCCCCC
Confidence 0111223456789999988543 37889999999999999997 999997655433221 122222 2233456
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 647 VSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 647 ~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
++.++.+||.+||.+||.+||++.+|..
T Consensus 223 ~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 223 CPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 8999999999999999999999998865
No 249
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.7e-37 Score=325.13 Aligned_cols=268 Identities=25% Similarity=0.390 Sum_probs=209.6
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTF 476 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f 476 (683)
+.+..+.|.+.+.||.|+||.||+|.+..++..||||.+...... .....+..|+.++..+ .||||++++++|
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~------~~~~~~~~e~~~~~~~~~~~~i~~~~~~~ 83 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK------EENKRILMDLDVVLKSHDCPYIVKCYGYF 83 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh------HHHHHHHHHHHHHHhccCCCchHhhheee
Confidence 345567899999999999999999999888999999998543211 1134556677766666 499999999998
Q ss_pred ccCCceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
. +...+|+||||++ ++|.+++.. ...+++..+..++.+++.||.|||+. ++|+|+||+|.||++++++.+||+|||
T Consensus 84 ~-~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 84 I-TDSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK-HGVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred e-cCCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh-CCEecCCCcHHHEEEcCCCCEEECccc
Confidence 6 6778999999994 577777754 45789999999999999999999973 259999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK-TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~-~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~ 634 (683)
++..+..... .....|++.|+|||++.... .+.++.++||||||+++|+|++|+.||.........+. .+.
T Consensus 161 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--~~~ 232 (296)
T cd06618 161 ISGRLVDSKA------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT--KIL 232 (296)
T ss_pred cchhccCCCc------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH--HHh
Confidence 9876643211 12235788999999986443 23478899999999999999999999976433322222 122
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
......++....++.++.+||.+||..+|.+||++.+++.||||+..+
T Consensus 233 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 233 QEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred cCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 222233343345789999999999999999999999999999998653
No 250
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6e-39 Score=321.15 Aligned_cols=268 Identities=26% Similarity=0.390 Sum_probs=218.2
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
.-+.++||++.+.||+|||+-||++....++..||+|.+.... ...+..+++|+...++++|||+++++++.-
T Consensus 16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-------~~~~e~~~rEid~~rkf~s~~vl~l~dh~l 88 (302)
T KOG2345|consen 16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-------QEDIEEALREIDNHRKFNSPNVLRLVDHQL 88 (302)
T ss_pred EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-------hHHHHHHHHHHHHHHhhCCcchHHHHHHHH
Confidence 4567889999999999999999999999999999999875542 223578899999999999999999998763
Q ss_pred c----CCceEEEEEecccCCChhHHHh----cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcE
Q 005678 478 I----DQNTFCTVLEYCSGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVA 549 (683)
Q Consensus 478 ~----d~~~~~LV~Ey~~ggsL~~~L~----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~v 549 (683)
. ..+..||+++|+..|+|.+.+. ++..+++..+..|+.+|++||.+||+..+++.||||||.|||+.+.+.+
T Consensus 89 ~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~ 168 (302)
T KOG2345|consen 89 REEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLP 168 (302)
T ss_pred HhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCce
Confidence 2 2446899999999999999984 3347999999999999999999999988889999999999999999999
Q ss_pred EEEecCCccccccCcCCCcc-----cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchH
Q 005678 550 KVTDFGLSKIVEDDVGSQGM-----ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQ 624 (683)
Q Consensus 550 KL~DFGls~~~~~~~~~~~~-----~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~ 624 (683)
+|+|||.+..++-...+... +.. .-..|..|.|||.|.......++.++|||||||+||.|++|..||......
T Consensus 169 vl~D~GS~~~a~i~i~~~~~a~~lQe~a-~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~ 247 (302)
T KOG2345|consen 169 VLMDLGSATQAPIQIEGSRQALRLQEWA-EERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ 247 (302)
T ss_pred EEEeccCccccceEeechHHHHHHHHHH-HHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc
Confidence 99999998876543211110 111 124688899999998766667899999999999999999999999532211
Q ss_pred HHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 625 ERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 625 e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
-.-+. .-+....+.+|..+.+|..+.+||..||..||-+||++.+++.+
T Consensus 248 GgSla--LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 248 GGSLA--LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CCeEE--EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 10000 01233467788888899999999999999999999999999853
No 251
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.2e-37 Score=317.13 Aligned_cols=245 Identities=28% Similarity=0.427 Sum_probs=195.3
Q ss_pred EecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEec
Q 005678 410 LLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEY 489 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey 489 (683)
.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.++||||++++++|. ....+++||||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~ 74 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETL------PPDLKAKFLQEARILKQYSHPNIVRLIGVCT-QKQPIYIVMEL 74 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccC------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCeEEEEee
Confidence 6899999999999999999999999864321 1123457889999999999999999999886 66789999999
Q ss_pred ccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCc
Q 005678 490 CSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 490 ~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||.|||++.++.+||+|||++.........
T Consensus 75 ~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-- 150 (252)
T cd05084 75 VQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-- 150 (252)
T ss_pred ccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcCCCcEEECccccCccccccccc--
Confidence 9999999999653 46899999999999999999999865 999999999999999999999999998765422110
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.......++..|+|||.+.... ++.++|||||||++|+|++ |..||.......... .+.. ....+.+..+
T Consensus 151 -~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~---~~~~--~~~~~~~~~~ 221 (252)
T cd05084 151 -STGGMKQIPVKWTAPEALNYGR---YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE---AIEQ--GVRLPCPELC 221 (252)
T ss_pred -ccCCCCCCceeecCchhhcCCC---CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH---HHHc--CCCCCCcccC
Confidence 0011112346799999886443 7899999999999999997 999997654432211 1111 2223334567
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 648 SNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
+..+.+||.+||..+|.+||++.++++
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 899999999999999999999999874
No 252
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=9.2e-38 Score=325.48 Aligned_cols=259 Identities=24% Similarity=0.394 Sum_probs=206.4
Q ss_pred cccccccceeEEEEecccCceEEEEEEEccC-----CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCcee
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDLVE-----HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIV 470 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~-----g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV 470 (683)
.+.+..++|.+.+.||+|+||.||++..... ...||+|++..... ......+.+|+.++..+ +||||+
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~~h~~i~ 79 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKHKNII 79 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC------HHHHHHHHHHHHHHHhhcCCCCee
Confidence 4566778999999999999999999987543 37899998754321 12245688999999999 899999
Q ss_pred eeccccccCCceEEEEEecccCCChhHHHhc----------------CCCcchHHHHHHHHHHHHHHHHHHhcCCceEec
Q 005678 471 RLWDTFEIDQNTFCTVLEYCSGKDLDAVLKA----------------TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHY 534 (683)
Q Consensus 471 ~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~----------------~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHr 534 (683)
+++++|. ..+.+++||||+++++|..++.. ...+++..+..++.|++.||.|||+.+ |+|+
T Consensus 80 ~~~~~~~-~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~ 156 (293)
T cd05053 80 NLLGVCT-QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK--CIHR 156 (293)
T ss_pred eEEEEEc-CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--cccc
Confidence 9999886 56789999999999999999853 246889999999999999999999855 9999
Q ss_pred ccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-
Q 005678 535 DLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF- 613 (683)
Q Consensus 535 DLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt- 613 (683)
||||.|||++.++.+||+|||+++.+..... ........+++.|+|||.+.... ++.++|||||||++|+|++
T Consensus 157 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~el~~~ 230 (293)
T cd05053 157 DLAARNVLVTEDHVMKIADFGLARDIHHIDY---YRKTTNGRLPVKWMAPEALFDRV---YTHQSDVWSFGVLLWEIFTL 230 (293)
T ss_pred ccceeeEEEcCCCeEEeCccccccccccccc---eeccCCCCCCccccCHHHhccCC---cCcccceeehhhHHHHHhcC
Confidence 9999999999999999999999987654211 11122234567899999875443 7899999999999999997
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 614 GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 614 G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
|..||......+.. . .+. .....+.+..++..+.+||.+||..+|.+|||+.+++.+
T Consensus 231 g~~p~~~~~~~~~~-~--~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 231 GGSPYPGIPVEELF-K--LLK--EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred CCCCCCCCCHHHHH-H--HHH--cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 99999765543322 1 111 122223345678999999999999999999999999875
No 253
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.5e-37 Score=314.93 Aligned_cols=247 Identities=29% Similarity=0.443 Sum_probs=203.8
Q ss_pred EEecccCceEEEEEEEccC---CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVE---HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~---g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~L 485 (683)
+.||+|+||.||+|.+... +..|++|++....... ....+.+|+.++..++||||+++++++. +...+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~l 73 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE------ERKDFLKEARVMKKLGHPNVVRLLGVCT-EEEPLYL 73 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh------HHHHHHHHHHHHhhcCCCChheeeeeec-CCCceEE
Confidence 3689999999999998766 8999999986543211 3567889999999999999999999886 5788999
Q ss_pred EEecccCCChhHHHhcC---------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 486 VLEYCSGKDLDAVLKAT---------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~---------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||+
T Consensus 74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 74 VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred EEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECCCCcEEEccccc
Confidence 99999999999999764 77999999999999999999999955 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
+........ ........+++.|+|||.+... .++.++|||||||++|+|++ |..||......+.. . .+..
T Consensus 152 ~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~--~~~~ 222 (262)
T cd00192 152 SRDVYDDDY---YRKKTGGKLPIRWMAPESLKDG---IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVL-E--YLRK 222 (262)
T ss_pred ccccccccc---cccccCCCcCccccCHHHhccC---CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHH-H--HHHc
Confidence 987764321 1223344688999999988654 37899999999999999998 69999876543322 1 1111
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
....+....++.++.++|.+||..+|.+||++.+++.+
T Consensus 223 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 223 --GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred --CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 22333445789999999999999999999999999875
No 254
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-37 Score=322.04 Aligned_cols=255 Identities=24% Similarity=0.359 Sum_probs=202.1
Q ss_pred cccceeEEEEecccCceEEEEEEEcc-----CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLV-----EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDT 475 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~-----~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~ 475 (683)
.++.|.+.+.||+|+||.||+|.+.. ++..||+|.+..... ......+.+|+.+++.++||||++++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 77 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS------EQDESDFLMEALIMSKFNHQNIVRLIGV 77 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC------HHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 45679999999999999999999876 778999998743321 1123468889999999999999999998
Q ss_pred cccCCceEEEEEecccCCChhHHHhcCC-------CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLKATP-------VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG- 547 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~~~~-------~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g- 547 (683)
+. +.+..++||||++|++|.+++.... .+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++
T Consensus 78 ~~-~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 78 SF-ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTCKGP 154 (277)
T ss_pred Ec-cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEeccCC
Confidence 75 5677899999999999999996542 4889999999999999999999965 99999999999998655
Q ss_pred --cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchH
Q 005678 548 --VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQ 624 (683)
Q Consensus 548 --~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~ 624 (683)
.+||+|||+++.+...... .......+++.|+|||++.... ++.++|||||||++|+|++ |..||......
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~~g~~pf~~~~~~ 228 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYY---RKGGRAMLPIKWMPPEAFLDGI---FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ 228 (277)
T ss_pred CcceEeccCccccccCCccce---ecCCCCCccHhhCCHHHHhcCC---cCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 5999999999876322110 0111223456799999986443 8999999999999999996 99999765544
Q ss_pred HHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 625 ERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 625 e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
... . .+...... +.+..++..+.+||.+||..+|++||++.++++|
T Consensus 229 ~~~-~--~~~~~~~~--~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 229 EVM-E--FVTGGGRL--DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHH-H--HHHcCCcC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 322 1 12222222 2335689999999999999999999999999876
No 255
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2e-37 Score=319.76 Aligned_cols=260 Identities=27% Similarity=0.450 Sum_probs=205.0
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC-CceE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-QNTF 483 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-~~~~ 483 (683)
|.+.+.||.|+||.||+|.+..++..||+|.+..... .......+.+|+.+++.+.||||+++++++... .+.+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~-----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 75 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENE-----KEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSI 75 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccc-----cccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcE
Confidence 6788999999999999999998999999999865431 112235677899999999999999999998743 2789
Q ss_pred EEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
++||||+++ +|..++... ..+++..+..++.+|+.||.|||..+ ++|+||+|+|||+++++.++|+|||++.....
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 76 YMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred EEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 999999964 898888654 57999999999999999999999865 99999999999999999999999999987654
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh-hccCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA-RKVEF 641 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~-~~~~~ 641 (683)
... .......+++.|+|||++.... .++.++||||||+++|+|++|..||.................. ....+
T Consensus 153 ~~~----~~~~~~~~~~~y~~PE~~~~~~--~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T cd07840 153 RNS----ADYTNRVITLWYRPPELLLGAT--RYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENW 226 (287)
T ss_pred CCc----ccccccccccccCCceeeEccc--cCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhc
Confidence 321 1122336788999999875322 3788999999999999999999999776654332211110000 00001
Q ss_pred CC-----------------------CcC-CCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 642 PS-----------------------RPA-VSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 642 p~-----------------------~~~-~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
+. ... ++..+.++|.+||..+|.+||++.+++.||||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 227 PGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00 011 38899999999999999999999999999997
No 256
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.3e-37 Score=324.40 Aligned_cols=258 Identities=22% Similarity=0.369 Sum_probs=204.7
Q ss_pred ccceeEEEEecccCceEEEEEEEccCC----------------eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEH----------------RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV 465 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g----------------~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~ 465 (683)
..+|.+++.||+|+||.||+|.+...+ ..||+|.+..... ......+.+|+.++..++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~e~~~l~~l~ 77 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS------DNAREDFLKEVKILSRLS 77 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC------HHHHHHHHHHHHHHHhcC
Confidence 467999999999999999999876543 5689998754422 133567889999999999
Q ss_pred CCceeeeccccccCCceEEEEEecccCCChhHHHhcCC-----------CcchHHHHHHHHHHHHHHHHHHhcCCceEec
Q 005678 466 HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATP-----------VLPEREARIIIVQIFQGLIYLNKRAQKIIHY 534 (683)
Q Consensus 466 HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~-----------~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHr 534 (683)
||||++++++|. +...+++||||+++++|..++.... .+++..++.++.|++.||.|||+.+ |+|+
T Consensus 78 ~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--i~H~ 154 (296)
T cd05051 78 DPNIARLLGVCT-VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHR 154 (296)
T ss_pred CCCEeEEEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccc
Confidence 999999999886 5578999999999999999997654 6899999999999999999999865 9999
Q ss_pred ccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-
Q 005678 535 DLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF- 613 (683)
Q Consensus 535 DLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt- 613 (683)
||||+|||++.++.++|+|||++........ ........+++.|+|||++.... ++.++|||||||++|+|++
T Consensus 155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~~ 228 (296)
T cd05051 155 DLATRNCLVGKNYTIKIADFGMSRNLYSSDY---YRVQGRAPLPIRWMAWESVLLGK---FTTKSDVWAFGVTLWEILTL 228 (296)
T ss_pred ccchhceeecCCCceEEccccceeecccCcc---eeecCcCCCCceecCHHHhhcCC---CCccchhhhhHHHHHHHHhc
Confidence 9999999999999999999999976543211 11223345778899999886443 7899999999999999997
Q ss_pred -CCCCCCCCchHHHHHHHHHHHH--hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 614 -GRRPFGHDQTQERILREDTIIK--ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 614 -G~~PF~~~~~~e~il~~~~i~~--~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
|..||......+.+........ ......+..+.++.++.+||.+||..+|.+||++.++++
T Consensus 229 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 229 CREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 7789876554443322111110 112223344567899999999999999999999999964
No 257
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.7e-38 Score=344.03 Aligned_cols=259 Identities=23% Similarity=0.337 Sum_probs=205.1
Q ss_pred cccccccceeEEEEecccCceEEEEEEEccC-----CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCcee
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDLVE-----HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIV 470 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~-----g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV 470 (683)
.|.+..++|.+++.||+|+||.||+|.+... +..||||++..... ......+.+|+.++..+. |||||
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~~Ei~~l~~l~~HpnIv 104 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR------SSEKQALMSELKIMTHLGPHLNIV 104 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC------hHHHHHHHHHHHHHHhcCCCCCee
Confidence 5566788999999999999999999986433 35799998854321 122357889999999996 99999
Q ss_pred eeccccccCCceEEEEEecccCCChhHHHhcC------------------------------------------------
Q 005678 471 RLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT------------------------------------------------ 502 (683)
Q Consensus 471 ~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~------------------------------------------------ 502 (683)
+++++|. +.+.+|+|||||++|+|.++|...
T Consensus 105 ~l~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (400)
T cd05105 105 NLLGACT-KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQA 183 (400)
T ss_pred eEEEEEc-cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccc
Confidence 9999986 677899999999999999988432
Q ss_pred ------------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEec
Q 005678 503 ------------------------------------------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHY 534 (683)
Q Consensus 503 ------------------------------------------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHr 534 (683)
..+++..+..++.||+.||.|||+.+ |+|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~ 261 (400)
T cd05105 184 DTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHR 261 (400)
T ss_pred cccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCC
Confidence 23778888999999999999999865 9999
Q ss_pred ccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-
Q 005678 535 DLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF- 613 (683)
Q Consensus 535 DLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt- 613 (683)
||||.|||++.++.+||+|||+++........ .......|++.|+|||++.... ++.++|||||||++|+|++
T Consensus 262 dikp~Nill~~~~~~kL~DfGla~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~DiwSlGvil~ellt~ 335 (400)
T cd05105 262 DLAARNVLLAQGKIVKICDFGLARDIMHDSNY---VSKGSTFLPVKWMAPESIFDNL---YTTLSDVWSYGILLWEIFSL 335 (400)
T ss_pred CCChHhEEEeCCCEEEEEeCCcceeccccccc---cccCCcCCCcceEChhhhcCCC---CCchhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865432111 1122235778899999886433 7899999999999999996
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 614 GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 614 G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
|..||........+... +. .....+....++..+.+||.+||..+|.+||++.++.+
T Consensus 336 g~~P~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 336 GGTPYPGMIVDSTFYNK--IK--SGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred CCCCCcccchhHHHHHH--Hh--cCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 99999765443333221 11 12233444578999999999999999999999988865
No 258
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.5e-37 Score=324.73 Aligned_cols=264 Identities=25% Similarity=0.416 Sum_probs=206.1
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
..++|.+.+.||.|+||.||+|.+..++..||||.+....... .....+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-----~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~ 79 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE-----GFPITAIREIKILRQLNHRNIVNLKEIVTDKQ 79 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc-----CchHHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence 4567999999999999999999999899999999886543211 11245678999999999999999999885322
Q ss_pred ---------ceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEE
Q 005678 481 ---------NTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 481 ---------~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vK 550 (683)
..+|+|+||+++ +|...+.. ...+++..+..++.||+.||.|||+.+ |+|+||||+||++++++.+|
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 80 DALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCcEE
Confidence 379999999976 67666654 346899999999999999999999865 99999999999999999999
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRE 630 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~ 630 (683)
|+|||++........ .......+++.|+|||++... ..++.++|||||||++|+|++|++||............
T Consensus 157 l~dfg~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~ 230 (302)
T cd07864 157 LADFGLARLYNSEES----RPYTNKVITLWYRPPELLLGE--ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELI 230 (302)
T ss_pred eCcccccccccCCcc----cccccceeccCccChHHhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999999987654321 112223567889999987532 23688999999999999999999999866554433222
Q ss_pred HHHHHhhc-cCC-----------------------CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 631 DTIIKARK-VEF-----------------------PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 631 ~~i~~~~~-~~~-----------------------p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
........ ..+ .....++..+.+||.+||..+|.+||++.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 11111000 000 0123478899999999999999999999999999997
No 259
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.1e-37 Score=316.20 Aligned_cols=253 Identities=26% Similarity=0.374 Sum_probs=203.2
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
|.+..++|.+.+.||.|+||.||+|.+. ++..||||.+..... ....+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~--------~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (261)
T cd05068 1 WEIDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM--------DPKDFLAEAQIMKKLRHPKLIQLYAVCT 71 (261)
T ss_pred CccchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc--------cHHHHHHHHHHHHHCCCCCccceeEEEe
Confidence 3456778999999999999999999864 567899998754321 1245778999999999999999999886
Q ss_pred cCCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
..+.+|+||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||+|||++.++.++|+|||
T Consensus 72 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg 148 (261)
T cd05068 72 -LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGENNICKVADFG 148 (261)
T ss_pred -cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcCCCCEEECCcc
Confidence 667889999999999999999654 36899999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
++......... ......++..|+|||++.... ++.++||||||+++|+|++ |+.||.......... .+.
T Consensus 149 ~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~---~~~ 218 (261)
T cd05068 149 LARVIKEDIYE----AREGAKFPIKWTAPEAALYNR---FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQ---QVD 218 (261)
T ss_pred eEEEccCCccc----ccCCCcCceeccCccccccCC---CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH---HHH
Confidence 99876532111 011112345799999886443 7899999999999999998 999997665433221 111
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+....++..+.+||.+||..+|.+||++.++++
T Consensus 219 --~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 219 --QGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred --cCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 12233444578899999999999999999999999874
No 260
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.4e-37 Score=317.85 Aligned_cols=254 Identities=24% Similarity=0.364 Sum_probs=203.6
Q ss_pred ccceeEEEEecccCceEEEEEEEccC---CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVE---HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~---g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
.++|.+.+.||+|+||.||+|.+..+ ...||||++..... ......+.+|+.++..++||||+++++.+.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~- 75 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS------DKQRLDFLTEASIMGQFDHPNIIRLEGVVT- 75 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC------hHHHHHHHHHHHHHHhCCCCCcceEeEEEe-
Confidence 35689999999999999999987543 45899998754321 122356788999999999999999999886
Q ss_pred CCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
..+.+++||||+++++|.+++... +.+++..+..++.+++.||.|||+.+ |+|+||||.|||++.++.++|+|||++
T Consensus 76 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~~~~~~l~dfg~~ 153 (266)
T cd05033 76 KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLS 153 (266)
T ss_pred cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCCEEECccchh
Confidence 677899999999999999999653 46899999999999999999999855 999999999999999999999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~ 636 (683)
......... .......+++.|+|||.+.... ++.++||||||+++|+|++ |..||......... . .+.
T Consensus 154 ~~~~~~~~~---~~~~~~~~~~~y~~Pe~~~~~~---~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~-~--~~~-- 222 (266)
T cd05033 154 RRLEDSEAT---YTTKGGKIPIRWTAPEAIAYRK---FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVI-K--AVE-- 222 (266)
T ss_pred hcccccccc---eeccCCCCCccccChhhhccCC---CccccchHHHHHHHHHHHccCCCCCCCCCHHHHH-H--HHH--
Confidence 887522111 1122335677899999886443 7899999999999999997 99999765543321 1 111
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.....+....++..+.+|+.+||..+|.+||++.+++++
T Consensus 223 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 223 DGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 122334445789999999999999999999999999864
No 261
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.8e-37 Score=323.26 Aligned_cols=267 Identities=26% Similarity=0.423 Sum_probs=202.6
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC--
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID-- 479 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d-- 479 (683)
.++|.+.+.||.|+||.||+|.+..++..||||.+........ ....+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-----FPITALREIKILKKLKHPNVVPLIDMAVERPD 81 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-----cchhHHHHHHHHHhcCCCCccchhhheecccc
Confidence 4689999999999999999999999999999998754322111 123456899999999999999999887532
Q ss_pred -----CceEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEe
Q 005678 480 -----QNTFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTD 553 (683)
Q Consensus 480 -----~~~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~D 553 (683)
...+++||+|+.+ +|...+. ....+++..+..++.||+.||.|||+.+ |+|+||||+|||+++++.++|+|
T Consensus 82 ~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 82 KSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred cccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECc
Confidence 2347999999964 6766664 3457999999999999999999999965 99999999999999999999999
Q ss_pred cCCccccccCcCCCc------ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH
Q 005678 554 FGLSKIVEDDVGSQG------MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI 627 (683)
Q Consensus 554 FGls~~~~~~~~~~~------~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i 627 (683)
||++........... ........|++.|+|||++... ..++.++|||||||++|+|++|.+||.........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE--RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCC--CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999986643321110 0112233678999999987532 23788999999999999999999999765554322
Q ss_pred HHHHHHHHh-hccC------------------CCC-----CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 628 LREDTIIKA-RKVE------------------FPS-----RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 628 l~~~~i~~~-~~~~------------------~p~-----~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
......... .... .+. ...++..+.+||.+||..+|.+|||+.+++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 111000000 0000 000 12345788999999999999999999999999998
No 262
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.3e-37 Score=330.04 Aligned_cols=276 Identities=27% Similarity=0.415 Sum_probs=210.9
Q ss_pred cccceeE-EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhH-H------HHHHHHHHHHHHHhhcCCCceeee
Q 005678 401 LNHRYAL-LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKK-Q------SYIRHAIREYNIHKTLVHHHIVRL 472 (683)
Q Consensus 401 ~~~ry~l-~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~-~------~~i~~~~rEi~il~~L~HpnIV~L 472 (683)
+.++|.. .+.||.|+||+||+|.+..++..||||.+........... . .....+.+|+.+++.++||||+++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 85 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL 85 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence 3456764 5779999999999999999999999998755432211100 0 011246789999999999999999
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEE
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVT 552 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~ 552 (683)
+++|. ..+.+|+||||+. ++|..++.....+++..+..++.||+.||.|||+.+ |+|+||+|+|||++.++.++|+
T Consensus 86 ~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~--i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 86 VDVYV-EGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY--FMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred eEEEe-cCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHeEECCCCCEEEC
Confidence 99986 6778999999996 699999987778999999999999999999999865 9999999999999999999999
Q ss_pred ecCCccccccCcCC---------CcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch
Q 005678 553 DFGLSKIVEDDVGS---------QGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT 623 (683)
Q Consensus 553 DFGls~~~~~~~~~---------~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~ 623 (683)
|||++......... ..........+++.|+|||++.... .++.++|||||||++|+|++|..||.....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAE--KYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999766421100 0011112235788999999886432 368899999999999999999999987765
Q ss_pred HHHHHHHHHHHH-hhccCCC---------------------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 624 QERILREDTIIK-ARKVEFP---------------------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 624 ~e~il~~~~i~~-~~~~~~p---------------------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.+.......... .....|+ ..+.++..+.+||.+||..+|++||++.+++.||||+..
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 543321111100 0000010 013457889999999999999999999999999999865
Q ss_pred C
Q 005678 682 K 682 (683)
Q Consensus 682 K 682 (683)
.
T Consensus 320 ~ 320 (335)
T PTZ00024 320 P 320 (335)
T ss_pred C
Confidence 3
No 263
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=350.75 Aligned_cols=247 Identities=26% Similarity=0.404 Sum_probs=206.0
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
|++.-+...-++-||.|+-|.||+| ...++.||||.+.- .+ ..+|.-|++|+||||+.|.|+|.
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~G--rl~netVAVKKV~e-------lk-------ETdIKHLRkLkH~NII~FkGVCt 182 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLG--RLHNETVAVKKVRE-------LK-------ETDIKHLRKLKHPNIITFKGVCT 182 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeee--eccCceehhHHHhh-------hh-------hhhHHHHHhccCcceeeEeeeec
Confidence 4444444445677999999999999 46788999996521 11 12566788999999999999996
Q ss_pred cCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
....+|||||||..|-|..+|+...+++......+..+|+.|+.|||.+ +|||||||.-||||..+..|||+|||.+
T Consensus 183 -qsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h--KIIHRDLKSPNiLIs~~d~VKIsDFGTS 259 (904)
T KOG4721|consen 183 -QSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH--KIIHRDLKSPNILISYDDVVKISDFGTS 259 (904)
T ss_pred -CCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh--hHhhhccCCCceEeeccceEEeccccch
Confidence 6678999999999999999999999999999999999999999999985 5999999999999999999999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
+....... ...++||..|||||++.... .+.|+|||||||+|||||||..||........|+. ....
T Consensus 260 ~e~~~~ST------kMSFaGTVaWMAPEvIrneP---csEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG----VGsN 326 (904)
T KOG4721|consen 260 KELSDKST------KMSFAGTVAWMAPEVIRNEP---CSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG----VGSN 326 (904)
T ss_pred Hhhhhhhh------hhhhhhhHhhhCHHHhhcCC---cccccceehhHHHHHHHHhcCCCccccchheeEEe----ccCC
Confidence 87765422 22348999999999997544 89999999999999999999999977655432221 1233
Q ss_pred ccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 005678 638 KVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDP 676 (683)
Q Consensus 638 ~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP 676 (683)
.+.+|.+..|++.++-||+.||.-.|..||++.+++.|-
T Consensus 327 sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 327 SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 456777789999999999999999999999999999883
No 264
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-37 Score=334.77 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=203.9
Q ss_pred ccccccceeEEEEecccCceEEEEEEE-----ccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceee
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYD-----LVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVR 471 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d-----~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~ 471 (683)
|.+..++|.+.+.||+|+||.||+|.+ ..+++.||||++..... ......+.+|+.++..+ .||||++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHHLNVVN 75 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC------hHHHHHHHHHHHHHHhccCCccHhh
Confidence 455678999999999999999999974 35678999999854321 12245788999999999 6899999
Q ss_pred eccccccCCceEEEEEecccCCChhHHHhcC-------------------------------------------------
Q 005678 472 LWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT------------------------------------------------- 502 (683)
Q Consensus 472 L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~------------------------------------------------- 502 (683)
++++|...+..+++|||||++|+|.+++...
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 9998876667889999999999999998532
Q ss_pred ------------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCc
Q 005678 503 ------------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDV 564 (683)
Q Consensus 503 ------------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~ 564 (683)
..+++..+..++.||+.||.|||+.+ |+||||||.|||++.++.+||+|||++..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCccCeEEEcCCCcEEEEecccccccccCc
Confidence 23677888899999999999999865 9999999999999999999999999998654321
Q ss_pred CCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 565 GSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 565 ~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
.. .......+++.|+|||++.... ++.++|||||||++|+|++ |..||........+.. .+..... .+.
T Consensus 234 ~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~--~~~~~~~--~~~ 303 (343)
T cd05103 234 DY---VRKGDARLPLKWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTR--MRA 303 (343)
T ss_pred ch---hhcCCCCCCcceECcHHhcCCC---CCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHH--HHhccCC--CCC
Confidence 10 1112234567899999886443 7899999999999999996 9999976543332221 1111112 222
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
+..+++++.+++.+||..+|.+||++.++++|
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 23478899999999999999999999999876
No 265
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.5e-37 Score=317.89 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=197.5
Q ss_pred eeEEEEecccCceEEEEEEEccCCe--EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC---
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHR--YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID--- 479 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~--~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d--- 479 (683)
|.+.+.||+|+||.||+|.+..++. .||||.+..... .......+.+|+.+++.++||||+++++.+...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 75 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-----TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES 75 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc
Confidence 3567889999999999998877665 699998765422 122356788999999999999999999875321
Q ss_pred --CceEEEEEecccCCChhHHHhc------CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEE
Q 005678 480 --QNTFCTVLEYCSGKDLDAVLKA------TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKV 551 (683)
Q Consensus 480 --~~~~~LV~Ey~~ggsL~~~L~~------~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL 551 (683)
...+++||||+++++|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl 153 (272)
T cd05075 76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNENMNVCV 153 (272)
T ss_pred cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcCCCCEEE
Confidence 2357899999999999988732 235889999999999999999999855 999999999999999999999
Q ss_pred EecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHH
Q 005678 552 TDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILRE 630 (683)
Q Consensus 552 ~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~ 630 (683)
+|||+++.+...... .......+++.|+|||++.... ++.++|||||||++|+|++ |..||....... ++.
T Consensus 154 ~Dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~---~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~- 225 (272)
T cd05075 154 ADFGLSKKIYNGDYY---RQGRIAKMPVKWIAIESLADRV---YTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-IYD- 225 (272)
T ss_pred CCCCcccccCcccce---ecCCcccCCcccCCHHHccCCC---cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHH-
Confidence 999999876533110 1112235677899999886443 7899999999999999999 899997654432 221
Q ss_pred HHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 631 DTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 631 ~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.+... ..++..+.++..+.++|.+||..+|.+|||+.+++++
T Consensus 226 -~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 226 -YLRQG--NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -HHHcC--CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 11111 2233445788999999999999999999999999864
No 266
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.2e-37 Score=332.69 Aligned_cols=262 Identities=27% Similarity=0.445 Sum_probs=208.2
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+.++|.+++.||+|+||.||+|.+..++..||||.+..... .......+.+|+.+++.++||||++++++|..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-----SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL 87 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-----chHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence 57789999999999999999999999999999998754321 1122356788999999999999999999986443
Q ss_pred -----ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 481 -----NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 481 -----~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
..+|+||+|+ +++|..++... .+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~l~~~~~~~-~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 88 SLDRFHDFYLVMPFM-GTDLGKLMKHE-KLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cccccceEEEEEecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecc
Confidence 2468999999 77999888754 5899999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH-
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII- 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~- 634 (683)
++...... .....+++.|+|||++... ..++.++|||||||++|+|++|..||................
T Consensus 164 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~ 233 (343)
T cd07880 164 LARQTDSE--------MTGYVVTRWYRAPEVILNW--MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTG 233 (343)
T ss_pred cccccccC--------ccccccCCcccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 99765432 1123678999999988532 237889999999999999999999998665433322110000
Q ss_pred -------------------H-hhccC---C-CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 635 -------------------K-ARKVE---F-PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 635 -------------------~-~~~~~---~-p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
. ...+. + ...+.++..+.++|.+||..||.+||++.+++.||||+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 0 00000 0 0124578889999999999999999999999999999753
No 267
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.9e-37 Score=322.09 Aligned_cols=253 Identities=25% Similarity=0.398 Sum_probs=201.6
Q ss_pred cccceeEEEEecccCceEEEEEEEc-----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDL-----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDT 475 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~-----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~ 475 (683)
-.+.|.+.+.||.|+||.||++.+. .++..||+|.+.... ......+.+|+.++..++||||++++++
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 75 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-------DNARKDFHREAELLTNLQHEHIVKFYGV 75 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-------HHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 3567999999999999999999752 345679999874321 1234578899999999999999999998
Q ss_pred cccCCceEEEEEecccCCChhHHHhcCC-------------CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceE
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLKATP-------------VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVL 542 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~~~~-------------~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NIL 542 (683)
|. +.+.+++||||+++++|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||
T Consensus 76 ~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nil 152 (288)
T cd05093 76 CV-EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCL 152 (288)
T ss_pred Ee-cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEE
Confidence 86 6778999999999999999996443 4899999999999999999999865 999999999999
Q ss_pred eCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 005678 543 FDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHD 621 (683)
Q Consensus 543 Ld~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~ 621 (683)
++.++.++|+|||++........ ........+++.|+|||.+.... ++.++|||||||++|+|++ |..||...
T Consensus 153 i~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~sDiwslG~il~~l~t~g~~p~~~~ 226 (288)
T cd05093 153 VGENLLVKIGDFGMSRDVYSTDY---YRVGGHTMLPIRWMPPESIMYRK---FTTESDVWSLGVVLWEIFTYGKQPWYQL 226 (288)
T ss_pred EccCCcEEeccCCccccccCCce---eecCCCCCccccccCHHHhccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999986543211 11122345678899999886443 7889999999999999998 99999766
Q ss_pred chHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 622 QTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 622 ~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+. .+.... ..+....++.++.+||.+||..+|.+|||+.+++.
T Consensus 227 ~~~~~~~---~i~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 227 SNNEVIE---CITQGR--VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CHHHHHH---HHHcCC--cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 5443221 111111 12223458899999999999999999999999853
No 268
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3e-37 Score=320.42 Aligned_cols=253 Identities=23% Similarity=0.363 Sum_probs=200.5
Q ss_pred cceeEEEEecccCceEEEEEEEc----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDL----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
+.|.+.+.||+|+||.||+|.+. ..+..||+|.+..... ......+.+|+.+++.++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~- 77 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN------PQQWGEFQQEASLMAELHHPNIVCLLGVVT- 77 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC------HHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-
Confidence 46888999999999999999753 3557899998753211 123456888999999999999999999886
Q ss_pred CCceEEEEEecccCCChhHHHhcC-----------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcce
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKAT-----------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNV 541 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~-----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NI 541 (683)
.....|+||||+++++|.+++... ..+++..+..++.+|+.||.|||+.+ |+|+||||+||
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~ni 155 (283)
T cd05090 78 QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNI 155 (283)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceE
Confidence 667899999999999999998422 24788889999999999999999865 99999999999
Q ss_pred EeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 005678 542 LFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGH 620 (683)
Q Consensus 542 LLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~ 620 (683)
|++.++.+||+|||+++.+...... .......++..|+|||++.... ++.++|||||||++|+|++ |..||..
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05090 156 LIGEQLHVKISDLGLSREIYSADYY---RVQPKSLLPIRWMPPEAIMYGK---FSSDSDIWSFGVVLWEIFSFGLQPYYG 229 (283)
T ss_pred EEcCCCcEEeccccccccccCCcce---ecccCCCccceecChHHhccCC---CCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999876432111 1122335677899999886433 7899999999999999998 9999976
Q ss_pred CchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 621 DQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 621 ~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
..... +.. . ... ....+.+..++..+.++|.+||..+|.+||++.+++++
T Consensus 230 ~~~~~-~~~--~-~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 230 FSNQE-VIE--M-VRK-RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCHHH-HHH--H-HHc-CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 54422 211 1 111 12233445789999999999999999999999999865
No 269
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.3e-37 Score=317.41 Aligned_cols=253 Identities=27% Similarity=0.473 Sum_probs=202.2
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||||.+..... ........+.+|+.+++.+.||||++++++|. +.+.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~----~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL----MDAKARADCIKEIDLLKQLNHPNVIKYYASFI-EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh----hhHHHHHHHHHHHHHHHHccCCchhhhhheeE-eCCe
Confidence 357888999999999999999989999999998754321 12223467889999999999999999999986 6778
Q ss_pred EEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 483 FCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
+++||||+++++|.+++.. ...+++..+..++.+|+.||.|||+.+ |+|+||||+||+++.++.++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 9999999999999998853 356899999999999999999999865 9999999999999999999999999987
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
....... ......|++.|+|||++.... ++.++||||||+++|+|++|..||........... .....
T Consensus 155 ~~~~~~~-----~~~~~~~~~~~~ape~~~~~~---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~ 222 (267)
T cd08229 155 FFSSKTT-----AAHSLVGTPYYMSPERIHENG---YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC----KKIEQ 222 (267)
T ss_pred ccccCCc-----ccccccCCcCccCHHHhcCCC---ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh----hhhhc
Confidence 6643211 112336899999999986443 78899999999999999999999965432211111 01111
Q ss_pred cCCCC--CcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 639 VEFPS--RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 639 ~~~p~--~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
..++. ...++..+.+||.+||..+|.+|||+.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 223 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred CCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 12222 2357889999999999999999999997764
No 270
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.5e-37 Score=328.57 Aligned_cols=264 Identities=27% Similarity=0.396 Sum_probs=209.0
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
.++++|.+.+.||.|+||.||+|.+..++..||||.+....... ...+.+..|+.++..++||||++++++|...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP-----VLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc-----chhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 46789999999999999999999999999999999875432111 2235677899999999999999999998755
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
...+|+|+||+ +++|..++... .+++..+..++.||+.||.|||+.+ |+|+||+|+|||++.++.++|+|||++..
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLTSR-PLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECCCCCEEeCccccccc
Confidence 67899999999 66898888754 4888899999999999999999965 99999999999999999999999999875
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH------
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI------ 633 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i------ 633 (683)
.... .....+++.|+|||.+... ..++.++|||||||++|+|++|..||...............
T Consensus 158 ~~~~--------~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 158 QDPQ--------MTGYVSTRYYRAPEIMLTW--QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred cCCC--------cCCCcccccccCceeeecc--CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 4321 1123678899999987532 23789999999999999999999999765442221110000
Q ss_pred --------------HHhhcc--CCC---CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 634 --------------IKARKV--EFP---SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 634 --------------~~~~~~--~~p---~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
...... ..| ..+.++..+.+||.+||..+|.+||++.+++.||||...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc
Confidence 000000 011 1135788999999999999999999999999999997643
No 271
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.7e-37 Score=314.18 Aligned_cols=246 Identities=27% Similarity=0.412 Sum_probs=197.2
Q ss_pred EEecccCceEEEEEEEccCC---eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEH---RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g---~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~L 485 (683)
+.||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.+.|||||++++++. ...+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~ 72 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA------AGKKEFLREASVMAQLDHPCIVRLIGVCK--GEPLML 72 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch------HHHHHHHHHHHHHHhcCCCCeeeEEEEEc--CCceEE
Confidence 36999999999999876554 78999987654321 23457888999999999999999999875 556899
Q ss_pred EEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcC
Q 005678 486 VLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVG 565 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~ 565 (683)
||||+++++|.+++...+.+++..+..++.|++.||.|||..+ |+|+||||+|||++.++.+||+|||+++.......
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 73 VMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred EEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 9999999999999987778999999999999999999999865 99999999999999999999999999987643321
Q ss_pred CCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCC
Q 005678 566 SQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSR 644 (683)
Q Consensus 566 ~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~ 644 (683)
.........++..|+|||++.... ++.++|||||||++|+|++ |..||......+.. . .+... ...+.+
T Consensus 151 --~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~-~--~~~~~--~~~~~~ 220 (257)
T cd05060 151 --YYRATTAGRWPLKWYAPECINYGK---FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI-A--MLESG--ERLPRP 220 (257)
T ss_pred --ccccccCccccccccCHHHhcCCC---CCccchHHHHHHHHHHHHcCCCCCcccCCHHHHH-H--HHHcC--CcCCCC
Confidence 111111223456799999886443 8889999999999999997 99999776553322 1 11111 122344
Q ss_pred cCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 645 PAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 645 ~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
..++..+.+||.+||..+|.+||++.+++.
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 578899999999999999999999999874
No 272
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.9e-37 Score=324.79 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=206.8
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|...+.||.|+||+||+|.+..++..|+||.+...... .......+.+|+.+++.++||||++++++|. +....
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~ 96 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ----TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-KEHTA 96 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC----chHHHHHHHHHHHHHHhCCCCCCccEEEEEE-eCCEE
Confidence 466778899999999999999999999999987543221 1223457888999999999999999999986 67788
Q ss_pred EEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
|+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.....
T Consensus 97 ~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~ 173 (313)
T cd06633 97 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASKSSP 173 (313)
T ss_pred EEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECCCCCEEEeecCCCcccCC
Confidence 99999996 57777764 3456899999999999999999999865 99999999999999999999999999864321
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
.....|++.|+|||++.......++.++|||||||++|+|++|..||............ ....... .
T Consensus 174 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~~~~~-~ 240 (313)
T cd06633 174 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQNDSPT-L 240 (313)
T ss_pred ---------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---HhcCCCC-C
Confidence 12346899999999986433345788999999999999999999999776554433221 1111111 1
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
..+.++..+.+||.+||.++|.+||++.+++.||||+..
T Consensus 241 ~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 241 QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 124577889999999999999999999999999999754
No 273
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.4e-37 Score=311.30 Aligned_cols=251 Identities=29% Similarity=0.509 Sum_probs=208.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||.|+||.||++.+..++..|+||.+....... .....+.+|+.+++.++||||+++++++. +...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~ 74 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-----KEREDAVNEIRILASVNHPNIISYKEAFL-DGNKL 74 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-----HHHHHHHHHHHHHHhCCCCCchhhhhhhc-cCCEE
Confidence 4889999999999999999999999999999886543221 22356678999999999999999999986 56889
Q ss_pred EEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 484 CTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
++||||+++++|..++.. ...+++..+..++.+++.||.|||+.+ ++|+||+|.||+++.++.+||+|||++..
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~~~~~kl~d~g~~~~ 152 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVANDLVKIGDLGISKV 152 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEecCCcEEEeeccchhh
Confidence 999999999999999855 356899999999999999999999865 99999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
.... ......|++.|+|||.+... .++.++|+||||+++|+|++|+.||.......... .+ ...
T Consensus 153 ~~~~-------~~~~~~~~~~~~~Pe~~~~~---~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~---~~---~~~ 216 (256)
T cd08530 153 LKKN-------MAKTQIGTPHYMAPEVWKGR---PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRY---KV---QRG 216 (256)
T ss_pred hccC-------CcccccCCccccCHHHHCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HH---hcC
Confidence 7543 12234688999999998643 37889999999999999999999997765432211 11 111
Q ss_pred CCC-CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 640 EFP-SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 640 ~~p-~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.++ ....++.++.++|.+||..+|.+||++.++++||++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 217 KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 222 224678999999999999999999999999999985
No 274
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.1e-37 Score=324.43 Aligned_cols=259 Identities=23% Similarity=0.361 Sum_probs=206.5
Q ss_pred cccccccceeEEEEecccCceEEEEEEEc-----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCcee
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDL-----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIV 470 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~-----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV 470 (683)
++++..++|.+.+.||+|+||.||+|.+. .++..||||++..... ......+.+|+.+++++ +||||+
T Consensus 29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h~~iv 102 (302)
T cd05055 29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH------SSEREALMSELKIMSHLGNHENIV 102 (302)
T ss_pred cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC------hHHHHHHHHHHHHHHhccCCCCcc
Confidence 45677889999999999999999999752 3456899998754321 12245788999999999 799999
Q ss_pred eeccccccCCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCc
Q 005678 471 RLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGV 548 (683)
Q Consensus 471 ~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~ 548 (683)
+++++|. ..+.+++||||+++++|..++... ..+++..+..++.+++.||.|||+.+ |+|+||||+|||++.++.
T Consensus 103 ~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~ 179 (302)
T cd05055 103 NLLGACT-IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTHGKI 179 (302)
T ss_pred eEEEEEe-cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcCCCe
Confidence 9999886 667899999999999999999643 33899999999999999999999865 999999999999999999
Q ss_pred EEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHH
Q 005678 549 AKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERI 627 (683)
Q Consensus 549 vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~i 627 (683)
++|+|||++......... .......+++.|+|||.+.... ++.++|||||||++|+|++ |..||........+
T Consensus 180 ~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~ 253 (302)
T cd05055 180 VKICDFGLARDIMNDSNY---VVKGNARLPVKWMAPESIFNCV---YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF 253 (302)
T ss_pred EEECCCcccccccCCCce---eecCCCCcccccCCHhhhccCC---CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH
Confidence 999999999866433211 1122235678899999886443 7889999999999999998 99999766554433
Q ss_pred HHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 628 LREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 628 l~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
... .. .....+.....+..+.+||.+||..+|++||++.+++.
T Consensus 254 ~~~---~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 254 YKL---IK-EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHH---HH-cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 221 11 12222333467899999999999999999999999975
No 275
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.5e-37 Score=316.38 Aligned_cols=251 Identities=27% Similarity=0.375 Sum_probs=201.4
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
.+..++|.+.+.||+|+||.||+|.+..+ ..||||++..... ....+.+|+.+++.++||||+++++.+.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~~~~~- 71 (262)
T cd05071 2 EIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM--------SPEAFLQEAQVMKKLRHEKLVQLYAVVS- 71 (262)
T ss_pred CCChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc--------CHHHHHHHHHHHHhCCCCCcceEEEEEC-
Confidence 45567899999999999999999987655 4599998754221 1235788999999999999999998874
Q ss_pred CCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
...+++||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||.|||++.++.++|+|||+
T Consensus 72 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~~~~~~L~dfg~ 148 (262)
T cd05071 72 -EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGL 148 (262)
T ss_pred -CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcCCCcEEeccCCc
Confidence 45688999999999999999653 45889999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
+..+...... ......++..|+|||+..... ++.++|||||||++|+|++ |..||........... +.
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~---~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~---~~- 217 (262)
T cd05071 149 ARLIEDNEYT----ARQGAKFPIKWTAPEAALYGR---FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VE- 217 (262)
T ss_pred eeeccccccc----cccCCcccceecCHhHhccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHH---Hh-
Confidence 9876533211 112235677899999875433 7999999999999999999 8889976655432211 11
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+....++..+.+||.+||..+|.+||++.+++.
T Consensus 218 -~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 218 -RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 12223444578999999999999999999999998875
No 276
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.7e-37 Score=315.96 Aligned_cols=253 Identities=23% Similarity=0.297 Sum_probs=198.3
Q ss_pred eeEEEEecccCceEEEEEEEccC---CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC-
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVE---HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ- 480 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~---g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~- 480 (683)
|.+.+.||+|+||.||+|....+ +..||+|.+...... ...+..+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 75 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-----YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASS 75 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-----HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCc
Confidence 56788999999999999986543 478999988643221 223567899999999999999999998875322
Q ss_pred ----ceEEEEEecccCCChhHHHhcC------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEE
Q 005678 481 ----NTFCTVLEYCSGKDLDAVLKAT------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 481 ----~~~~LV~Ey~~ggsL~~~L~~~------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vK 550 (683)
..+++||||+++++|..++... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||+++++.+|
T Consensus 76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~k 153 (273)
T cd05035 76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLREDMTVC 153 (273)
T ss_pred cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECCCCeEE
Confidence 2478999999999999998432 35899999999999999999999865 99999999999999999999
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHH
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILR 629 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~ 629 (683)
|+|||+++.+...... .......+++.|+|||.+... .++.++|||||||++|+|++ |..||......+.. .
T Consensus 154 l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~-~ 226 (273)
T cd05035 154 VADFGLSKKIYSGDYY---RQGRIAKMPVKWIAIESLADR---VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY-D 226 (273)
T ss_pred ECCccceeeccccccc---cccccccCCccccCHhhcccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH-H
Confidence 9999999876433211 111223456789999987533 37889999999999999999 89999765544322 1
Q ss_pred HHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 630 EDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 630 ~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.+.... ..+.+..++..+.++|.+||..||.+||++.+++.+
T Consensus 227 --~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 227 --YLRHGN--RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred --HHHcCC--CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 222222 223345789999999999999999999999999864
No 277
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.5e-37 Score=325.28 Aligned_cols=258 Identities=25% Similarity=0.389 Sum_probs=208.4
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|...+.||+|+||.||+|.+..++..||+|.+....... ......+..|+.+++.++|||+++++++|. +.+.
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----NEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-REHT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc----hHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-eCCe
Confidence 44778899999999999999998899999999875442222 123457888999999999999999999886 6678
Q ss_pred EEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.++||||++| +|.+++. ....+++..+..++.+|+.||.|||+.+ |+|+||+|+||+++.++.++|+|||++....
T Consensus 100 ~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 100 AWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred EEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 8999999965 7777764 3456899999999999999999999865 9999999999999999999999999987543
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF 641 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~ 641 (683)
.. ....|++.|+|||++.......++.++|||||||++|+|++|..||........+.. +.... ...
T Consensus 177 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~~~-~~~ 243 (317)
T cd06635 177 PA---------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQNE-SPT 243 (317)
T ss_pred Cc---------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH---HHhcc-CCC
Confidence 21 223688999999998543334578999999999999999999999976554333321 11111 112
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.....++..+.+||.+||..+|.+||++.++++|||+...
T Consensus 244 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 244 LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 2234678899999999999999999999999999998653
No 278
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.9e-37 Score=318.24 Aligned_cols=249 Identities=30% Similarity=0.513 Sum_probs=194.8
Q ss_pred eEEEEecccCceEEEEEEEc----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 406 ALLNLLGKGGFSEVYKAYDL----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 406 ~l~~~LGkGgfG~Vyka~d~----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.+.+.||.|.||.||+|... ..+..|+||++..... ......+.+|+.++++++||||+++++++. ..+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~------~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-~~~ 74 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS------EEEEEEFLNEIQILRKLRHPNIVKLYGFCI-ENE 74 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSS------HHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-SSS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccc------cccceeeeeccccccccccccccccccccc-ccc
Confidence 46789999999999999876 4578899999844211 112567889999999999999999999987 666
Q ss_pred eEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
.+++|||||++|+|.++|... ..+++..+..|+.||+.||.|||+.+ |+|+||+|.|||++.++.+||+|||++..
T Consensus 75 ~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~~~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 75 PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDSNGQVKLSDFGLSRP 152 (259)
T ss_dssp SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEETTTEEEEESTTTGEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence 799999999999999999775 67999999999999999999999965 99999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
..... .........+...|+|||++.... ++.++||||||+++|||++ |..||......+.. . .+.....
T Consensus 153 ~~~~~---~~~~~~~~~~~~~~~aPE~~~~~~---~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~-~--~~~~~~~ 223 (259)
T PF07714_consen 153 ISEKS---KYKNDSSQQLPLRYLAPEVLKDGE---YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEII-E--KLKQGQR 223 (259)
T ss_dssp TTTSS---SEEESTTSESGGGGS-HHHHHHSE---ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHH-H--HHHTTEE
T ss_pred ccccc---cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-c--ccccccc
Confidence 63221 112233345778899999987655 7999999999999999999 78999776544322 1 2222222
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.+....++..+.++|.+||..+|.+||++.++++
T Consensus 224 --~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 --LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp --TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred --ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 2334568999999999999999999999999874
No 279
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.4e-37 Score=313.54 Aligned_cols=248 Identities=27% Similarity=0.374 Sum_probs=198.1
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
+.|.+.+.||+|+||.||++.. ..+..||+|.+...... ...+..|+.+++.++||||++++++|. +...
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~-~~~~~~a~K~~~~~~~~--------~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 73 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKW-RAQIKVAIKAINEGAMS--------EEDFIEEAKVMMKLSHPKLVQLYGVCT-QQKP 73 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEe-ccCceEEEEecccCCcc--------HHHHHHHHHHHHHCCCCCceeEEEEEc-cCCC
Confidence 4688899999999999999975 44567999987533211 235778999999999999999999886 6778
Q ss_pred EEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+++||||+++++|.+++.. .+.+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.+||+|||++....
T Consensus 74 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05114 74 LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSSTGVVKVSDFGMTRYVL 151 (256)
T ss_pred EEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcCCCeEEECCCCCccccC
Confidence 9999999999999999864 356899999999999999999999865 9999999999999999999999999998654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......++..|+|||++.... ++.++||||||+++|+|++ |+.||......+.+.. +.....
T Consensus 152 ~~~~~----~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~---i~~~~~-- 219 (256)
T cd05114 152 DDEYT----SSSGAKFPVKWSPPEVFNFSK---YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM---ISRGFR-- 219 (256)
T ss_pred CCcee----ccCCCCCchhhCChhhcccCc---cchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---HHCCCC--
Confidence 32111 111224566899999986443 7889999999999999999 9999977655433221 111111
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.+.+...+..+.+||.+||..+|.+||++.++++
T Consensus 220 ~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1223457889999999999999999999999975
No 280
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.8e-37 Score=316.20 Aligned_cols=255 Identities=24% Similarity=0.380 Sum_probs=202.9
Q ss_pred cceeEEEEecccCceEEEEEEEccCCe---EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHR---YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~---~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
..|.+.+.||+|+||.||+|.+..++. .||||++.... .......+..|+.+++.+.||||+++++++. +
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~ 76 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY------TEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-K 76 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC------CHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-C
Confidence 358899999999999999998876654 69999875431 1223467889999999999999999999886 6
Q ss_pred CceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
...+++||||+++++|.+++.. .+.+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++.
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~~~~~kl~dfg~~~ 154 (269)
T cd05065 77 SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSR 154 (269)
T ss_pred CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcCCCcEEECCCcccc
Confidence 7788999999999999999964 456899999999999999999999865 9999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhh
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
................+.++..|+|||++.... ++.++|||||||++|+|++ |..||......+.. . .+ ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~-~--~i--~~ 226 (269)
T cd05065 155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRK---FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-N--AI--EQ 226 (269)
T ss_pred ccccCccccccccccCCCcceeecCHhHhccCc---ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHH-H--HH--Hc
Confidence 765432211111111112346799999986443 7889999999999999886 99999765544322 1 11 12
Q ss_pred ccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 638 KVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 638 ~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
....|..+.++..+.+++.+||..+|.+||++.+++.
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 227 DYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 2344555678999999999999999999999999875
No 281
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.4e-37 Score=323.94 Aligned_cols=261 Identities=25% Similarity=0.381 Sum_probs=205.2
Q ss_pred CccccccccceeEEEEecccCceEEEEEEEcc-------CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CC
Q 005678 395 FNNFQILNHRYALLNLLGKGGFSEVYKAYDLV-------EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VH 466 (683)
Q Consensus 395 f~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~-------~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~H 466 (683)
...|.+..++|.+.+.||+|+||.||+|.+.. +...||+|++..... ......+.+|+.++..+ +|
T Consensus 10 ~~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~l~~h 83 (307)
T cd05098 10 DPRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT------EKDLSDLISEMEMMKMIGKH 83 (307)
T ss_pred CCcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC------hHHHHHHHHHHHHHHHhcCC
Confidence 34567778999999999999999999997643 235799998864321 11245688899999999 79
Q ss_pred CceeeeccccccCCceEEEEEecccCCChhHHHhcC----------------CCcchHHHHHHHHHHHHHHHHHHhcCCc
Q 005678 467 HHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT----------------PVLPEREARIIIVQIFQGLIYLNKRAQK 530 (683)
Q Consensus 467 pnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~ 530 (683)
|||++++++|. +.+.+++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+
T Consensus 84 ~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-- 160 (307)
T cd05098 84 KNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-- 160 (307)
T ss_pred CCEeeEEEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--
Confidence 99999999986 567889999999999999999643 24788999999999999999999865
Q ss_pred eEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHH
Q 005678 531 IIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQ 610 (683)
Q Consensus 531 IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyE 610 (683)
|+|+||||+|||++.++.+||+|||++......... .......+++.|+|||++.... ++.++|||||||++|+
T Consensus 161 i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~e 234 (307)
T cd05098 161 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY---KKTTNGRLPVKWMAPEALFDRI---YTHQSDVWSFGVLLWE 234 (307)
T ss_pred cccccccHHheEEcCCCcEEECCCcccccccccchh---hccccCCCccceeChHHhccCC---CCcHHHHHHHHHHHHH
Confidence 999999999999999999999999998765432110 1122234567899999886433 7899999999999999
Q ss_pred HHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 611 MLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 611 LLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
|++ |..||......+ +.. .+.. ....+.+..++.++.+||.+||..+|.+||++.+++.+
T Consensus 235 l~~~g~~p~~~~~~~~-~~~--~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 235 IFTLGGSPYPGVPVEE-LFK--LLKE--GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHcCCCCCCCcCCHHH-HHH--HHHc--CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 998 889997654432 221 1111 11223335688999999999999999999999999864
No 282
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.7e-37 Score=317.22 Aligned_cols=250 Identities=28% Similarity=0.407 Sum_probs=204.3
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
....|.+.+.||.|+||.||+|.+.. +..||+|++..... .....+..|+.+++.++||||+++++++. +.
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~ 74 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL-------LKQQDFQKEVQALKRLRHKHLISLFAVCS-VG 74 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch-------hhHHHHHHHHHHHhcCCCcchhheeeeEe-cC
Confidence 34568899999999999999999876 89999998754321 11345778999999999999999999886 67
Q ss_pred ceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
..+++||||+++++|.+++.. ...+++..+..++.+|+.||.|||+.+ |+|+||||+|||++.++.+||+|||++.
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~~~~~kl~d~g~~~ 152 (261)
T cd05148 75 EPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGEDLVCKVADFGLAR 152 (261)
T ss_pred CCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcCCceEEEccccchh
Confidence 789999999999999999964 346899999999999999999999865 9999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhh
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
....... ......+++.|+|||.+... .++.++||||||+++|+|++ |+.||......+.+.. +. .
T Consensus 153 ~~~~~~~-----~~~~~~~~~~~~~PE~~~~~---~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~---~~--~ 219 (261)
T cd05148 153 LIKEDVY-----LSSDKKIPYKWTAPEAASHG---TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQ---IT--A 219 (261)
T ss_pred hcCCccc-----cccCCCCceEecCHHHHccC---CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH---HH--h
Confidence 7643311 11233567789999988643 37889999999999999998 8999976654433221 11 2
Q ss_pred ccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 638 KVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 638 ~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
....+.+..++..+.++|.+||..+|.+|||+.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 220 GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2334445688999999999999999999999999875
No 283
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.4e-37 Score=322.48 Aligned_cols=250 Identities=24% Similarity=0.363 Sum_probs=197.6
Q ss_pred cceeEEEEecccCceEEEEEEEccCCe--EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHR--YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~--~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
+.|.+.+.||+|+||.||+|.+..++. .+++|.+.... .......+.+|+.++.++ .||||+++++++. +
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~ 74 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA------SENDHRDFAGELEVLCKLGHHPNIINLLGACE-N 74 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC------CHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-c
Confidence 568899999999999999998877664 47888764321 112245688899999999 7999999999886 5
Q ss_pred CceEEEEEecccCCChhHHHhcC----------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEe
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKAT----------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLF 543 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILL 543 (683)
.+.+++||||+++++|.+++... ..+++..++.++.|++.||.|||+.+ |+|+||||+|||+
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill 152 (297)
T cd05089 75 RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLV 152 (297)
T ss_pred CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEE
Confidence 67799999999999999999643 24888999999999999999999865 9999999999999
Q ss_pred CCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCc
Q 005678 544 DEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQ 622 (683)
Q Consensus 544 d~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~ 622 (683)
+.++.+||+|||++....... ......++..|+|||++.... ++.++|||||||++|+|++ |..||....
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwSlG~il~el~t~g~~pf~~~~ 223 (297)
T cd05089 153 GENLASKIADFGLSRGEEVYV------KKTMGRLPVRWMAIESLNYSV---YTTKSDVWSFGVLLWEIVSLGGTPYCGMT 223 (297)
T ss_pred CCCCeEEECCcCCCcccccee------ccCCCCcCccccCchhhccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999999986432110 111123356799999886433 7899999999999999997 999997765
Q ss_pred hHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 623 TQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 623 ~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
....... + ......+.+..++..+.+||.+||..+|.+||++.++++.
T Consensus 224 ~~~~~~~---~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 224 CAELYEK---L--PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred HHHHHHH---H--hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 5432211 1 1122233334689999999999999999999999999754
No 284
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.1e-37 Score=319.13 Aligned_cols=251 Identities=20% Similarity=0.296 Sum_probs=199.0
Q ss_pred cceeEEEEecccCceEEEEEEEccCCe----EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHR----YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~----~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
..|.+.+.||+|+||+||+|.+..++. .|++|.+.... .......+..|+.++..+.||||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~- 79 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS------GRQTFQEITDHMLAMGSLDHAYIVRLLGICP- 79 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc------chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-
Confidence 568889999999999999998877776 47777753221 1223456778888999999999999999874
Q ss_pred CCceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
...+++|+||+++|+|.+++.. .+.+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++
T Consensus 80 -~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~kl~Dfg~~ 156 (279)
T cd05111 80 -GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKSDSIVQIADFGVA 156 (279)
T ss_pred -CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEEcCCccc
Confidence 4567899999999999999964 456899999999999999999999865 999999999999999999999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~ 636 (683)
+.+...... .......|+..|+|||.+.... ++.++|||||||++|+|++ |..||......... .+...
T Consensus 157 ~~~~~~~~~---~~~~~~~~~~~y~~pE~~~~~~---~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~----~~~~~ 226 (279)
T cd05111 157 DLLYPDDKK---YFYSEHKTPIKWMALESILFGR---YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVP----DLLEK 226 (279)
T ss_pred eeccCCCcc---cccCCCCCcccccCHHHhccCC---cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH----HHHHC
Confidence 876433211 1123346778899999986443 8999999999999999998 99999765543211 11111
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
....+....++.++..++.+||..+|.+||++.++++
T Consensus 227 -~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 227 -GERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred -CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1222333457889999999999999999999999875
No 285
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.9e-37 Score=331.36 Aligned_cols=264 Identities=31% Similarity=0.491 Sum_probs=205.0
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC-
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ- 480 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~- 480 (683)
..+|.+.+.||.|+||.||+|.+..++..||+|.+..... ...+.+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-------~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-------QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-------chHHHHHHHHHHHHhcCCCcchhhHhhhccccc
Confidence 5789999999999999999999999999999998754322 22456788999999999999999998875332
Q ss_pred ------------ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC-CCC
Q 005678 481 ------------NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD-EFG 547 (683)
Q Consensus 481 ------------~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd-~~g 547 (683)
..+|+||||++ ++|..++... .+++..++.++.||+.||.|||+.+ |+|+||||+|||++ .++
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~~~~ 152 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYME-TDLANVLEQG-PLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccccccceEEEEeeccc-ccHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCc
Confidence 35789999996 5898888654 5899999999999999999999865 99999999999997 466
Q ss_pred cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH
Q 005678 548 VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI 627 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i 627 (683)
.++|+|||++..+....... .......|+..|+|||++... ..++.++|||||||++|+|++|..||.........
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~ 228 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHK--GYLSEGLVTKWYRSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQM 228 (342)
T ss_pred eEEECCcccceecCCccccc--cccccccccccccCHHHHhCc--cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 89999999997664321111 112334688999999986432 23788999999999999999999999765443322
Q ss_pred HHHHH--------------------HH-HhhccCCC---CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 628 LREDT--------------------II-KARKVEFP---SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 628 l~~~~--------------------i~-~~~~~~~p---~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..... .. .......+ ..+.++.++.+||.+||..+|.+||++.+++.||||+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 229 QLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred HHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 11000 00 00000000 01357889999999999999999999999999999973
No 286
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.7e-37 Score=317.47 Aligned_cols=256 Identities=22% Similarity=0.293 Sum_probs=204.9
Q ss_pred ccccceeEEEEecccCceEEEEEEEcc----CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLV----EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDT 475 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~----~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~ 475 (683)
+..++|.+.+.||+|+||.||+|.+.. ++..|++|++.... .......+.+|+.+++.++||||++++++
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~------~~~~~~~~~~e~~~l~~l~h~ni~~~~~~ 76 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA------SEIQVTLLLQESCLLYGLSHQNILPILHV 76 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC------CHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 456789999999999999999998765 36889999874321 12235678899999999999999999998
Q ss_pred cccCCceEEEEEecccCCChhHHHhcC--------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLKAT--------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~~~--------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g 547 (683)
+..++..++++++|+++++|..++... ..+++..+..++.+|+.||.|||+.+ |+|+||||+|||++.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~~~ 154 (280)
T cd05043 77 CIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDEEL 154 (280)
T ss_pred EecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcCCC
Confidence 765677889999999999999998543 45899999999999999999999855 99999999999999999
Q ss_pred cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHH
Q 005678 548 VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQER 626 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~ 626 (683)
.+||+|||+++.+...... .......++..|+|||++.... ++.++|||||||++|++++ |..||......+
T Consensus 155 ~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~---~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~- 227 (280)
T cd05043 155 QVKITDNALSRDLFPMDYH---CLGDNENRPVKWMALESLVNKE---YSSASDVWSFGVLLWELMTLGQTPYVEIDPFE- 227 (280)
T ss_pred cEEECCCCCcccccCCceE---EeCCCCCcchhccCHHHHhcCC---CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-
Confidence 9999999999865432211 1112224677899999886443 7899999999999999998 999997655433
Q ss_pred HHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 627 ILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 627 il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
+.. .+. ....++....+++++.+++.+||..+|++|||+.+++.
T Consensus 228 ~~~--~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 228 MAA--YLK--DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHH--HHH--cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 211 111 12233344567899999999999999999999999875
No 287
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=6e-37 Score=317.51 Aligned_cols=252 Identities=21% Similarity=0.325 Sum_probs=200.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCe----EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHR----YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~----~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
..+|.+.+.||.|+||+||+|....++. +||||++..... ......+.+|+.++..+.||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS------PKANKEILDEAYVMAGVGSPYVCRLLGICL 79 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC------HHHHHHHHHHHHHHHhcCCCCCceEEEEEc
Confidence 4678999999999999999998766665 589998754321 122356788999999999999999999885
Q ss_pred cCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
....+++++|+++|+|.+++... +.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 80 --~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~~~~~kL~dfG~ 155 (279)
T cd05109 80 --TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKSPNHVKITDFGL 155 (279)
T ss_pred --CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCCCcEEECCCCc
Confidence 34577999999999999999653 56899999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
++.+...... .......+++.|+|||.+.... ++.++|||||||++|||++ |..||....... +.. . +.
T Consensus 156 ~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~---~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~--~-~~ 225 (279)
T cd05109 156 ARLLDIDETE---YHADGGKVPIKWMALESILHRR---FTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-IPD--L-LE 225 (279)
T ss_pred eeecccccce---eecCCCccchhhCCHHHhccCC---CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHH--H-HH
Confidence 9876533211 1122234577899999886443 8899999999999999998 999997654432 111 1 11
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+..+.++.++.++|.+||..||..||++.+++.
T Consensus 226 -~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 226 -KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred -CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 12223344578999999999999999999999999984
No 288
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.1e-37 Score=315.11 Aligned_cols=252 Identities=26% Similarity=0.381 Sum_probs=201.4
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
|.+..++|.+.+.||+|+||.||+|.+. .+..||+|.+...... ...+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~--------~~~~~~E~~~l~~l~~~~i~~~~~~~~ 71 (260)
T cd05070 1 WEIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS--------PESFLEEAQIMKKLRHDKLVQLYAVVS 71 (260)
T ss_pred CCCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC--------HHHHHHHHHHHHhcCCCceEEEEeEEC
Confidence 4567788999999999999999999754 5667999987653221 135788999999999999999998874
Q ss_pred cCCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
....++||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||+|||+++++.++|+|||
T Consensus 72 --~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~~~~~~l~dfg 147 (260)
T cd05070 72 --EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGDGLVCKIADFG 147 (260)
T ss_pred --CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeCCceEEeCCce
Confidence 45678999999999999999643 45899999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
++..+...... ......++..|+|||++.... ++.++||||||+++|+|++ |..||......+... .+.
T Consensus 148 ~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~---~~~ 217 (260)
T cd05070 148 LARLIEDNEYT----ARQGAKFPIKWTAPEAALYGR---FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLE---QVE 217 (260)
T ss_pred eeeeccCcccc----cccCCCCCccccChHHHhcCC---CcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH---HHH
Confidence 99876432111 111224567899999875433 7889999999999999999 899997655433221 111
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+....++..+.+||.+||..+|.+|||+.++..
T Consensus 218 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 218 --RGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred --cCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 12233444568899999999999999999999998863
No 289
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.5e-37 Score=315.79 Aligned_cols=254 Identities=26% Similarity=0.367 Sum_probs=203.3
Q ss_pred ccceeEEEEecccCceEEEEEEEccCC---eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEH---RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g---~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
..+|.+.+.||+|+||.||+|.+..++ ..||+|.+..... ......+.+|+.++..++||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~- 75 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT------EKQRRDFLSEASIMGQFDHPNIIHLEGVVT- 75 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC------HHHHHHHHHHHHHHHhCCCCCcceEEEEEe-
Confidence 357889999999999999999876443 4799998754321 122457888999999999999999999986
Q ss_pred CCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
+.+.+|+||||+++++|.+++... +.+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd05066 76 KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNSNLVCKVSDFGLS 153 (267)
T ss_pred cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECCCCeEEeCCCCcc
Confidence 667899999999999999999654 56899999999999999999999865 999999999999999999999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~ 636 (683)
..+..... .......+.++..|+|||++.... ++.++|||||||++|+|++ |..||......+... .+.
T Consensus 154 ~~~~~~~~--~~~~~~~~~~~~~y~~pe~~~~~~---~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~---~~~-- 223 (267)
T cd05066 154 RVLEDDPE--AAYTTRGGKIPIRWTAPEAIAYRK---FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK---AIE-- 223 (267)
T ss_pred cccccccc--eeeecCCCccceeecCHhHhccCc---cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH---HHh--
Confidence 87654321 111122234467899999986443 7899999999999999886 999997655433221 111
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....|....++..+.+|+.+||..+|.+||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 224 EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 12334545578999999999999999999999999875
No 290
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.3e-37 Score=322.74 Aligned_cols=258 Identities=22% Similarity=0.368 Sum_probs=199.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccC--------------CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCC
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVE--------------HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHH 467 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~--------------g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hp 467 (683)
..+|.+.+.||+|+||.||+|.+..+ ...||||.+..... ......+.+|+.+++.++||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~ei~~l~~l~h~ 77 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT------KTARNDFLKEIKIMSRLKNP 77 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC------HHHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999976432 23589998754321 12235688999999999999
Q ss_pred ceeeeccccccCCceEEEEEecccCCChhHHHhcC------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecc
Q 005678 468 HIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYD 535 (683)
Q Consensus 468 nIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrD 535 (683)
||++++++|. ..+.+++||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ ++|+|
T Consensus 78 ~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~d 154 (295)
T cd05097 78 NIIRLLGVCV-SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRD 154 (295)
T ss_pred CcCeEEEEEc-CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC--eeccc
Confidence 9999999986 667889999999999999998543 13688889999999999999999865 99999
Q ss_pred cCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc--
Q 005678 536 LKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-- 613 (683)
Q Consensus 536 LKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-- 613 (683)
|||+|||++.++.+||+|||++..+..... ........+++.|+|||++.... ++.++|||||||++|+|++
T Consensus 155 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwSlG~~l~el~~~~ 228 (295)
T cd05097 155 LATRNCLVGNHYTIKIADFGMSRNLYSGDY---YRIQGRAVLPIRWMAWESILLGK---FTTASDVWAFGVTLWEMFTLC 228 (295)
T ss_pred cChhhEEEcCCCcEEecccccccccccCcc---eeccCcCcCceeecChhhhccCC---cCchhhHHHHHHHHHHHHHcC
Confidence 999999999999999999999976543211 11122234577899999886443 7999999999999999987
Q ss_pred CCCCCCCCchHHHHHHHHHHHHh--hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 614 GRRPFGHDQTQERILREDTIIKA--RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 614 G~~PF~~~~~~e~il~~~~i~~~--~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
|..||........+......... ........+.+++.+.+||.+||..+|.+||++.++++
T Consensus 229 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 229 KEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred CCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 67788765544333221111111 11122334567899999999999999999999999864
No 291
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.5e-37 Score=314.19 Aligned_cols=252 Identities=27% Similarity=0.421 Sum_probs=202.7
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
|.+..+.|.+++.||.|+||.||+|.+ .++..||+|.+...... ...+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~--------~~~~~~E~~~l~~l~h~~i~~~~~~~~ 71 (260)
T cd05067 1 WEVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS--------PEAFLAEANLMKQLQHPRLVRLYAVVT 71 (260)
T ss_pred CccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCc--------HHHHHHHHHHHHhcCCcCeeeEEEEEc
Confidence 467788999999999999999999985 46788999987543221 235778999999999999999998874
Q ss_pred cCCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
...+++||||+++++|.+++.. ...+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||
T Consensus 72 --~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg 147 (260)
T cd05067 72 --QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSETLCCKIADFG 147 (260)
T ss_pred --cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcCCCCEEEccCc
Confidence 4568999999999999999854 346899999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
++......... ......+++.|+|||++.... ++.++|||||||++|+|++ |+.||......+.... +.
T Consensus 148 ~~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~---~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~---~~ 217 (260)
T cd05067 148 LARLIEDNEYT----AREGAKFPIKWTAPEAINYGT---FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN---LE 217 (260)
T ss_pred ceeecCCCCcc----cccCCcccccccCHHHhccCC---cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHH---HH
Confidence 99776532111 111224567899999886433 7889999999999999998 9999976654332211 11
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+.+..++.++.+||.+||..+|++||++.+++.
T Consensus 218 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 218 --RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 12233444568899999999999999999999998874
No 292
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=9.3e-37 Score=311.95 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=202.7
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||.|+||.||+|.+..++..||+|.+....... ......+.+|+.+++.++|+||++++++|. +.+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD----AKARQDCLKEIDLLKQLDHPNVIKYLASFI-ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc----hhhHHHHHHHHHHHHhCCCCCeeeeeeeee-cCCe
Confidence 57999999999999999999998899999999875432211 122457889999999999999999999996 5678
Q ss_pred EEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 483 FCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
+++||||+++++|..++.. ...+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECCCCcEEEeccceee
Confidence 9999999999999999853 345899999999999999999999965 9999999999999999999999999987
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
........ .....|++.|+|||.+.... ++.++|||||||++|+|++|..||......-..+. ..+.....
T Consensus 155 ~~~~~~~~-----~~~~~~~~~y~apE~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~ 225 (267)
T cd08224 155 FFSSKTTA-----AHSLVGTPYYMSPERIHENG---YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIEKCDY 225 (267)
T ss_pred eccCCCcc-----cceecCCccccCHHHhccCC---CCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHH-hhhhcCCC
Confidence 65433211 12236889999999886433 78899999999999999999999965432111110 11111111
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...| .+.++..+.++|.+||..+|.+||++.++++
T Consensus 226 ~~~~-~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 226 PPLP-ADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred CCCC-hhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 1111 1267889999999999999999999998874
No 293
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.1e-37 Score=326.31 Aligned_cols=258 Identities=18% Similarity=0.246 Sum_probs=197.1
Q ss_pred CceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecccCCC
Q 005678 415 GFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKD 494 (683)
Q Consensus 415 gfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~~ggs 494 (683)
++|.||.+.+..++..||||++...... ......+.+|+.+++.++||||++++++|. +.+.++++|||+++++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCS-----KEDLKLLQQEIITSRQLQHPNILPYVTSFI-VDSELYVVSPLMAYGS 85 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccc-----hhHHHHHHHHHHHHHhcCCcchhhhhheee-cCCeEEEEEeccCCCC
Confidence 4455666666779999999998654221 223567889999999999999999999986 6778999999999999
Q ss_pred hhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCC--Cccc
Q 005678 495 LDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGS--QGME 570 (683)
Q Consensus 495 L~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~--~~~~ 570 (683)
|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.+|.+||+|||.+......... ....
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence 99999653 45899999999999999999999865 999999999999999999999999998765432111 1112
Q ss_pred ccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH----------H-----
Q 005678 571 LTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII----------K----- 635 (683)
Q Consensus 571 l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~----------~----- 635 (683)
......++..|+|||++.... ..++.++|||||||++|+|++|..||.........+....-. .
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNL-QGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred ccccccccccccCHHHhcCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence 233446788999999986432 237889999999999999999999998765544332211000 0
Q ss_pred -------------hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 636 -------------ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 636 -------------~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
......+....++.++.+||.+||.+||++|||+.++++||||+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 0000011112345678999999999999999999999999999865
No 294
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.4e-37 Score=320.01 Aligned_cols=259 Identities=25% Similarity=0.364 Sum_probs=199.5
Q ss_pred ccce-eEEEEecccCceEEEEEE----EccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 402 NHRY-ALLNLLGKGGFSEVYKAY----DLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 402 ~~ry-~l~~~LGkGgfG~Vyka~----d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
.++| .+++.||+|+||+||++. ...++..||+|++..... ......+.+|+.+++.++||||+++++++
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 75 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG------QQNTSGWKKEINILKTLYHENIVKYKGCC 75 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC------hHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 3456 889999999999998864 235678999998754321 11235678899999999999999999987
Q ss_pred ccC-CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 477 EID-QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 477 ~~d-~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
... ...+++||||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||
T Consensus 76 ~~~~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 76 SEQGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred ecCCCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcCCCcEEEeecc
Confidence 543 45688999999999999999765 4999999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHH-HHHHH----
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQE-RILRE---- 630 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e-~il~~---- 630 (683)
++......... ........++..|+|||++.... ++.++|||||||++|+|++|..||....... .....
T Consensus 153 ~~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~---~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05080 153 LAKAVPEGHEY--YRVREDGDSPVFWYAVECLKENK---FSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQ 227 (283)
T ss_pred cccccCCcchh--hccCCCCCCCceeeCHhHhcccC---CCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccc
Confidence 99876543211 11222335677799999886433 7899999999999999999999986543211 00000
Q ss_pred ---HHH--HHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 631 ---DTI--IKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 631 ---~~i--~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
... ........+.+..++..+.+|+.+||..+|.+|||+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 228 MTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred cchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000 00111223334568899999999999999999999999975
No 295
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.5e-37 Score=329.92 Aligned_cols=262 Identities=27% Similarity=0.454 Sum_probs=204.5
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+.++|.+...||.|+||.||+|.+..++..||||.+...... ......+.+|+.+++.++||||++++++|....
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 87 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-----EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAV 87 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-----ccchhHHHHHHHHHHhcCCCCccchhheecccc
Confidence 356899999999999999999999899999999987543211 122346788999999999999999999886332
Q ss_pred -----ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 481 -----NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 481 -----~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
..+|+|+||+. .+|..++. ..+++..+..++.|++.||.|||..+ |+||||||+|||++.++.+||+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 88 SGDEFQDFYLVMPYMQ-TDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred cCCCCceEEEEecccc-cCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCC
Confidence 35789999995 47777653 35899999999999999999999965 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH-
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII- 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~- 634 (683)
+++..... .....||+.|+|||++... ..++.++|||||||++|+|++|+.||........+.......
T Consensus 163 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 232 (342)
T cd07879 163 LARHADAE--------MTGYVVTRWYRAPEVILNW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 232 (342)
T ss_pred CCcCCCCC--------CCCceeeecccChhhhcCc--cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 98765322 1123678999999987542 237889999999999999999999997655433221110000
Q ss_pred ---------------H--hh-ccCCCC------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 635 ---------------K--AR-KVEFPS------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 635 ---------------~--~~-~~~~p~------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
. .. ...++. .+.++..+.+||.+||..||.+||++.+++.||||...+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 233 VPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred CCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0 00 000110 135778899999999999999999999999999997654
No 296
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7.9e-37 Score=317.05 Aligned_cols=260 Identities=24% Similarity=0.370 Sum_probs=200.9
Q ss_pred ccceeEEEEecccCceEEEEEE----EccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAY----DLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~----d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
..+|.+++.||+|+||.||+|. +..++..||||.+.... ......+.+|+.++..++||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 75 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-------AEHLRDFEREIEILKSLQHDNIVKYKGVCY 75 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-------HHHHHHHHHHHHHHHhCCCCCeeEEEEEEc
Confidence 3578999999999999999986 44678899999875432 123467889999999999999999998764
Q ss_pred -cCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 478 -IDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 478 -~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
.+...+++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||
T Consensus 76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~~~~~~l~dfg 153 (284)
T cd05081 76 SAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVESENRVKIGDFG 153 (284)
T ss_pred cCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECCCCeEEECCCc
Confidence 2445789999999999999999654 46899999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH-H------
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI-L------ 628 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i-l------ 628 (683)
++..+...... ........++..|+|||++.... ++.++|||||||++|+|++|..|+......... .
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd05081 154 LTKVLPQDKEY--YKVREPGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQG 228 (284)
T ss_pred ccccccCCCcc--eeecCCCCCceEeeCHHHhccCC---cChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhccccccc
Confidence 99876543211 11122234455699999886433 788999999999999999998776543221100 0
Q ss_pred --HHHHH--HHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 629 --REDTI--IKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 629 --~~~~i--~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
....+ .......++....++..+.+||.+||..+|.+|||+.+++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 229 QMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred ccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 00000 011122344456789999999999999999999999999753
No 297
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.8e-37 Score=312.78 Aligned_cols=246 Identities=26% Similarity=0.395 Sum_probs=198.4
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
+....|.+.+.||+|+||.||++. ..+..||+|.+.... ....+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~--~~~~~~~~k~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCIKNDA---------TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEE--EcCCcEEEEEeCCCc---------hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC
Confidence 344678999999999999999995 458889999874321 134678899999999999999999986556
Q ss_pred CceEEEEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
.+.+++||||+++++|.+++.... .+++..+..++.+|+.||.|||+.+ |+|+||||+|||++.++.+||+|||++
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~ 149 (256)
T cd05082 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSEDNVAKVSDFGLT 149 (256)
T ss_pred CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcCCCcEEecCCccc
Confidence 678899999999999999996543 4889999999999999999999865 999999999999999999999999998
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~ 636 (683)
....... ....++..|+|||++.... ++.++|||||||++|+|++ |+.||......... . .+..
T Consensus 150 ~~~~~~~--------~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~-~--~~~~- 214 (256)
T cd05082 150 KEASSTQ--------DTGKLPVKWTAPEALREKK---FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-P--RVEK- 214 (256)
T ss_pred eeccccC--------CCCccceeecCHHHHccCC---CCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH-H--HHhc-
Confidence 7553321 1224566799999886433 7889999999999999997 99999765443321 1 1111
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.......+.++..+.+||.+||..+|.+|||+.++++
T Consensus 215 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 215 -GYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 1222233578999999999999999999999999975
No 298
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=7.5e-37 Score=309.64 Aligned_cols=247 Identities=33% Similarity=0.468 Sum_probs=205.8
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecc
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYC 490 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~ 490 (683)
||.|+||.||++.+..++..||+|++..... ........+..|+.+++.++||||+++++.+. ++..+|+||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI----IKRKEVEHTLTERNILSRINHPFIVKLHYAFQ-TEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh----cchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-cCCeeEEEEecC
Confidence 6999999999999988899999998755422 11234567888999999999999999999986 678899999999
Q ss_pred cCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCccc
Q 005678 491 SGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGME 570 (683)
Q Consensus 491 ~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~ 570 (683)
++++|.+++.....+++..+..++.|++.||.|||+.+ ++|+||+|.||+++.++.++|+|||++....... .
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-----~ 148 (250)
T cd05123 76 PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-----S 148 (250)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcCCCcEEEeecCcceecccCC-----C
Confidence 99999999988777999999999999999999999855 9999999999999999999999999997764431 1
Q ss_pred ccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHH
Q 005678 571 LTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNE 650 (683)
Q Consensus 571 l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~e 650 (683)
......|+..|+|||.+.... ++.++|+||||+++|+|++|..||....... ... .+. ...++.+..++..
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~---~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-~~~--~~~---~~~~~~~~~~~~~ 219 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKG---YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE-IYE--KIL---KDPLRFPEFLSPE 219 (250)
T ss_pred cccCCcCCccccChHHhCCCC---CCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHH--HHh---cCCCCCCCCCCHH
Confidence 123346889999999886443 6889999999999999999999997665422 111 111 1233444567999
Q ss_pred HHHHHHHhcccCCCCCCCH---HHHhcCccc
Q 005678 651 AKDLIRRCLTYNQAERPDV---LTLAQDPYL 678 (683)
Q Consensus 651 l~dLI~rCL~~dP~kRPS~---~eLl~hP~l 678 (683)
+.+||.+||..+|.+||++ .++++||||
T Consensus 220 l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 220 ARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9999999999999999999 999999998
No 299
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.7e-37 Score=316.78 Aligned_cols=258 Identities=31% Similarity=0.483 Sum_probs=205.8
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
|.+.+.||.|++|.||+|.+..++..|++|.+....... .....+.+|+.+++.++||||+++++++. ++..++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~ 74 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE-----GIPKTALREIKLLKELNHPNIIKLLDVFR-HKGDLY 74 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc-----hhHHHHHHHHHHHHHhcCCCcchHHHhhc-cCCCEE
Confidence 567889999999999999998899999999875443211 22456778999999999999999999986 678899
Q ss_pred EEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 485 TVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
+||||+++ +|..++.. ...+++..+..++.+|+.||.|||..+ |+|+||+|+||+++.++.++|+|||.+......
T Consensus 75 ~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~ 151 (283)
T cd05118 75 LVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151 (283)
T ss_pred EEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence 99999965 88887754 467999999999999999999999865 999999999999999999999999998776543
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH--------
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK-------- 635 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~-------- 635 (683)
. .......++..|+|||.+... ..++.++||||||+++|+|++|+.||......+.+........
T Consensus 152 ~-----~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (283)
T cd05118 152 V-----RPYTHYVVTRWYRAPELLLGD--KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWP 224 (283)
T ss_pred c-----ccccCccCcccccCcHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcc
Confidence 2 112223688999999988643 2378999999999999999999999976665443322111000
Q ss_pred -------hhccCCC---------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 -------ARKVEFP---------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 -------~~~~~~p---------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....++ ..+.++..+.+||.+||..+|.+||++.+++.||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 225 KFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0001111 113478899999999999999999999999999997
No 300
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=9.3e-37 Score=313.48 Aligned_cols=244 Identities=27% Similarity=0.426 Sum_probs=193.9
Q ss_pred ecccCceEEEEEEEc--cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEe
Q 005678 411 LGKGGFSEVYKAYDL--VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 411 LGkGgfG~Vyka~d~--~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
||+|+||.||+|.+. ..+..||||++..... ......+.+|+.+++.++||||+++++++. ...+++|||
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~------~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--~~~~~lv~e 74 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE------KSVRDEMMREAEIMHQLDNPYIVRMIGVCE--AEALMLVME 74 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccC------hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc--CCCeEEEEE
Confidence 899999999999764 4566799998754321 223457889999999999999999999875 457899999
Q ss_pred cccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 489 YCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 489 y~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++.........
T Consensus 75 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~- 151 (257)
T cd05115 75 MASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY- 151 (257)
T ss_pred eCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcCCCcEEeccCCccccccCCccc-
Confidence 9999999999964 457899999999999999999999865 999999999999999999999999999865433211
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPA 646 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~ 646 (683)
......+.+++.|+|||++.... ++.++|||||||++|+|++ |..||......+... .+.... ..+.++.
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~---~~~~~~--~~~~~~~ 222 (257)
T cd05115 152 -YKARSAGKWPLKWYAPECINFRK---FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMS---FIEQGK--RLDCPAE 222 (257)
T ss_pred -eeccCCCCCCcccCCHHHHccCC---CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHH---HHHCCC--CCCCCCC
Confidence 11122234567899999886443 7889999999999999996 999997665543221 111222 2233356
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 647 VSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 647 ~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
++.++.++|.+||.++|.+||++.++++
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 8999999999999999999999999875
No 301
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=377.99 Aligned_cols=267 Identities=25% Similarity=0.433 Sum_probs=227.4
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+.-+|.-..+||.|.||.||-|.+..+|...|+|-+...... ...++.+.+|+.++..++|||||++||+-. +.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-----~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv-HR 1306 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-----HKTFKLIAEEMKVLEGLNHPNLVRYYGVEV-HR 1306 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-----cccCcchHHHHHHHHhccCccccccCceee-cH
Confidence 456888889999999999999999999999999976543221 344677889999999999999999998754 67
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
...+|.||||.+|+|.+++..++..++...+.+..|++.|+.|||++| ||||||||.||||+.+|.+|++|||.|..+
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcC--ceecCCCccceeeecCCcEEeecccceeEe
Confidence 778899999999999999999888999999999999999999999976 999999999999999999999999999887
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
........-+ ....+|||.|||||+|.+.+.....-+.|||||||++.||+||+.||...+....|+. .+...+.+.
T Consensus 1385 ~~~~~~~~~e-l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy--~V~~gh~Pq 1461 (1509)
T KOG4645|consen 1385 KNNAQTMPGE-LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMY--HVAAGHKPQ 1461 (1509)
T ss_pred cCchhcCCHH-HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHh--HHhccCCCC
Confidence 6553111111 2234899999999999877754466789999999999999999999998888777754 334445555
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
+|. .+|.+..+||.+||..||.+|+++.+|+.|.|-..
T Consensus 1462 ~P~--~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1462 IPE--RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred Cch--hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 664 49999999999999999999999999999998654
No 302
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.2e-36 Score=311.98 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=200.0
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
++..++|.+...||.|+||.||+|.+..+ ..||+|.+..... ....+.+|+.+++.+.||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~--------~~~~~~~E~~~l~~l~h~~i~~~~~~~~- 71 (260)
T cd05069 2 EIPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM--------MPEAFLQEAQIMKKLRHDKLVPLYAVVS- 71 (260)
T ss_pred cCChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc--------cHHHHHHHHHHHHhCCCCCeeeEEEEEc-
Confidence 45567899999999999999999986554 4699998754321 1235778999999999999999998875
Q ss_pred CCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
.+..++||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||+|||++.++.++|+|||+
T Consensus 72 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~~~~~~l~dfg~ 148 (260)
T cd05069 72 -EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGDNLVCKIADFGL 148 (260)
T ss_pred -CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCeEEECCCcc
Confidence 45688999999999999999653 34789999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
+......... ......++..|+|||...... ++.++|||||||++|+|++ |..||......+.... +.
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~y~~Pe~~~~~~---~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~---~~- 217 (260)
T cd05069 149 ARLIEDNEYT----ARQGAKFPIKWTAPEAALYGR---FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ---VE- 217 (260)
T ss_pred ceEccCCccc----ccCCCccchhhCCHHHhccCC---cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---HH-
Confidence 9766432111 111224677899999876433 7899999999999999999 9999977655432211 11
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+....++..+.+||.+||..+|.+||++.++++
T Consensus 218 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 218 -RGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred -cCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 12233334568899999999999999999999998864
No 303
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=4e-37 Score=330.48 Aligned_cols=262 Identities=26% Similarity=0.440 Sum_probs=207.5
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
+.++|.+...||.|+||.||+|.+..++..||||++...... ......+.+|+.+++.+.||||+++++++..+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-----AIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS 87 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-----hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence 567899999999999999999999999999999987543211 122456778999999999999999999886333
Q ss_pred c-----eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 481 N-----TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 481 ~-----~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
. .+|+|+||+ +++|.+++... .+++..+..++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~L~~~~~~~-~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 88 SLEDFQDVYLVTHLM-GADLNNIVKCQ-KLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccccccEEEEEecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEcccc
Confidence 2 489999999 67999998764 5999999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~ 635 (683)
++...... .....+++.|+|||.+.... .++.++|||||||++|+|++|+.||........+........
T Consensus 164 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~--~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~ 233 (343)
T cd07851 164 LARHTDDE--------MTGYVATRWYRAPEIMLNWM--HYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVG 233 (343)
T ss_pred cccccccc--------ccCCcccccccCHHHHhCCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Confidence 99865432 12236889999999875322 368899999999999999999999976654432211100000
Q ss_pred h------------------hcc------CCC-CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 636 A------------------RKV------EFP-SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 636 ~------------------~~~------~~p-~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
. ... .+. ..+.++..+.+||.+||..+|.+|||+.+|+.||||...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~ 304 (343)
T cd07851 234 TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY 304 (343)
T ss_pred CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence 0 000 000 012468899999999999999999999999999999754
No 304
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.9e-37 Score=313.63 Aligned_cols=249 Identities=26% Similarity=0.343 Sum_probs=199.2
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|.+.+.||.|+||.||+|.+. ++..+|||++...... ...+.+|+.+++.++||||+++++++. +.+.
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~ 73 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS--------EDDFIEEAKVMMKLSHPNLVQLYGVCT-KQRP 73 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC--------HHHHHHHHHHHHhCCCCCEEEEEEEEc-CCCc
Confidence 35788899999999999999864 5678999987533211 235678999999999999999999886 6678
Q ss_pred EEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||+++...
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 74 IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred eEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECCCCcEEECCcccceecc
Confidence 9999999999999999965 346899999999999999999999965 9999999999999999999999999998664
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......++..|+|||++.... ++.++|||||||++|+|++ |..||......+... .+.. ...
T Consensus 152 ~~~~~----~~~~~~~~~~y~~Pe~~~~~~---~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~---~~~~--~~~ 219 (256)
T cd05059 152 DDQYT----SSQGTKFPVKWAPPEVFDYSR---FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVE---SVSA--GYR 219 (256)
T ss_pred ccccc----ccCCCCCCccccCHHHhccCC---CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHH---HHHc--CCc
Confidence 32111 111123456799999886444 7889999999999999998 899997655443221 1111 222
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.+.+..++..+.++|.+||..+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 33345689999999999999999999999999864
No 305
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.8e-37 Score=320.88 Aligned_cols=259 Identities=25% Similarity=0.377 Sum_probs=205.6
Q ss_pred cccccccceeEEEEecccCceEEEEEEEc-------cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCc
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDL-------VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHH 468 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~-------~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~Hpn 468 (683)
.|.+..++|.+.+.||+|+||.||+|... .++..||+|.+.... .......+.+|+.+++.+ +|||
T Consensus 9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~------~~~~~~~~~~E~~~l~~l~~h~~ 82 (304)
T cd05101 9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA------TEKDLSDLVSEMEMMKMIGKHKN 82 (304)
T ss_pred cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc------chHHHHHHHHHHHHHHhhccCCC
Confidence 46778889999999999999999999742 235689999875321 112246788999999999 8999
Q ss_pred eeeeccccccCCceEEEEEecccCCChhHHHhcC----------------CCcchHHHHHHHHHHHHHHHHHHhcCCceE
Q 005678 469 IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT----------------PVLPEREARIIIVQIFQGLIYLNKRAQKII 532 (683)
Q Consensus 469 IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~II 532 (683)
|++++++|. ..+.+++||||+++++|..++... ..+++..+..++.||+.||.|||+.+ |+
T Consensus 83 i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g--iv 159 (304)
T cd05101 83 IINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK--CI 159 (304)
T ss_pred chheeEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC--ee
Confidence 999999986 567889999999999999999643 24778889999999999999999865 99
Q ss_pred ecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH
Q 005678 533 HYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML 612 (683)
Q Consensus 533 HrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL 612 (683)
|+||||+|||++.++.+||+|||+++.+...... .......+++.|+|||++.... ++.++|||||||++|+|+
T Consensus 160 H~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~ 233 (304)
T cd05101 160 HRDLAARNVLVTENNVMKIADFGLARDVNNIDYY---KKTTNGRLPVKWMAPEALFDRV---YTHQSDVWSFGVLMWEIF 233 (304)
T ss_pred ecccccceEEEcCCCcEEECCCccceeccccccc---ccccCCCCCceeeCchhhccCC---CCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999876433211 1123345678899999886433 789999999999999999
Q ss_pred c-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 613 F-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 613 t-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
+ |..||......+... .+... ........++..+.+||.+||..+|.+||++.++++.
T Consensus 234 ~~g~~p~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 234 TLGGSPYPGIPVEELFK---LLKEG--HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred cCCCCCcccCCHHHHHH---HHHcC--CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 8 888997655443221 11111 2222335688999999999999999999999999864
No 306
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-36 Score=312.50 Aligned_cols=255 Identities=25% Similarity=0.394 Sum_probs=202.4
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCe---EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHR---YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~---~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
..+.|...+.||+|+||.||+|.+..++. .||+|.+..... ......+..|+.++..++||||+++++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 76 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT------EKQRQDFLSEASIMGQFSHHNIIRLEGVVT 76 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC------HHHHHHHHHHHHHHhcCCCCCeeEEEEEEc
Confidence 34578889999999999999998876554 799998754321 112356788999999999999999999986
Q ss_pred cCCceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
+.+.+++||||+++++|..++.. .+.+++..+..++.+++.||.|||+.+ |+|+||||+|||++.++.+||+|||+
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~ 153 (268)
T cd05063 77 -KFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNSNLECKVSDFGL 153 (268)
T ss_pred -cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcCCCcEEECCCcc
Confidence 66788999999999999999965 457899999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
+.......... ........++.|+|||++.... ++.++|||||||++|+|++ |..||......+.. . .+.
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~---~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~-~--~i~- 224 (268)
T cd05063 154 SRVLEDDPEGT--YTTSGGKIPIRWTAPEAIAYRK---FTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVM-K--AIN- 224 (268)
T ss_pred ceecccccccc--eeccCCCcCceecCHHHhhcCC---cChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH-H--HHh-
Confidence 98665432111 1111223456799999886443 7899999999999999997 99999765443322 1 111
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....|....++..+.+||.+||..+|.+||++.++++
T Consensus 225 -~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 225 -DGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 12234444568899999999999999999999999975
No 307
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6e-37 Score=361.02 Aligned_cols=258 Identities=26% Similarity=0.395 Sum_probs=202.2
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+.+.||+|+||.||+|.+..+++.||||++....... ......+.+|+.+++.++||||+++++++. +.+.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~----e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN----PLLKKRFLREAKIAADLIHPGIVPVYSICS-DGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccC----HHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-eCCE
Confidence 47999999999999999999999999999999986432211 223457889999999999999999999886 6778
Q ss_pred EEEEEecccCCChhHHHhcC-----------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEE
Q 005678 483 FCTVLEYCSGKDLDAVLKAT-----------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKV 551 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~-----------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL 551 (683)
.|+||||++|++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.++|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~dg~vKL 154 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGLFGEVVI 154 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcCCCCEEE
Confidence 99999999999999998531 23566778889999999999999965 999999999999999999999
Q ss_pred EecCCccccccCcC-------------CCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 005678 552 TDFGLSKIVEDDVG-------------SQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPF 618 (683)
Q Consensus 552 ~DFGls~~~~~~~~-------------~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF 618 (683)
+|||+++....... ...+......+||+.|+|||++.... ++.++|||||||++|+|++|..||
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~---~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP---ASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC---CCcHhHHHHHHHHHHHHHHCCCCC
Confidence 99999987622110 01111222347999999999886443 799999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 619 GHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 619 ~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
........... ..+ .....+.....+++.+.+++.+||..||.+||+..+.+
T Consensus 232 ~~~~~~ki~~~-~~i--~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 232 RRKKGRKISYR-DVI--LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred CCcchhhhhhh-hhc--cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 76444322211 111 11112222346889999999999999999998755544
No 308
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6e-37 Score=313.48 Aligned_cols=255 Identities=28% Similarity=0.503 Sum_probs=202.8
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
+|.+.+.||+|+||.||++.+...+..+++|++......... ......+.+|+.+++.++||||+++++++. +...+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~ 77 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELN--PNETVQANQEAQLLSKLDHPAIVKFHASFL-ERDAF 77 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccC--cchHHHHHHHHHHHHhCCCCcHHHHHHHHh-cCCce
Confidence 688999999999999999998888777888876543221111 111235667899999999999999999986 66789
Q ss_pred EEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 484 CTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
|+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++. +.++|+|||++..
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~~l~~~nili~~-~~~~l~d~g~~~~ 154 (260)
T cd08222 78 CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR--ILHRDLKAKNIFLKN-NLLKIGDFGVSRL 154 (260)
T ss_pred EEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCChhheEeec-CCEeecccCceee
Confidence 999999999999998843 356899999999999999999999865 999999999999985 6799999999877
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
..... .......|++.|+|||.+.... ++.++|+||||+++|+|++|..||........... +.. .
T Consensus 155 ~~~~~-----~~~~~~~~~~~~~~pe~~~~~~---~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~---~~~---~ 220 (260)
T cd08222 155 LMGSC-----DLATTFTGTPYYMSPEALKHQG---YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR---IVE---G 220 (260)
T ss_pred cCCCc-----ccccCCCCCcCccCHHHHccCC---CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH---HHc---C
Confidence 64321 1223346899999999875433 78899999999999999999999975543322211 111 1
Q ss_pred CCCC-CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 640 EFPS-RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 640 ~~p~-~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
..+. ...++.++.++|.+||..+|++||++.++++||||
T Consensus 221 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 221 PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 1222 24678899999999999999999999999999997
No 309
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-36 Score=310.49 Aligned_cols=246 Identities=26% Similarity=0.391 Sum_probs=201.6
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
+..+.|.+.+.||.|+||.||+|.+ .|+.||||.+..... ..+.+.+|+.+++.++||||+++++++. +
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~--------~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~ 71 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST--------AAQAFLAEASVMTTLRHPNLVQLLGVVL-Q 71 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh--------HHHHHHHHHHHHHhcCCcceeeeEEEEc-C
Confidence 4456789999999999999999964 589999998854321 3567889999999999999999999986 5
Q ss_pred CceEEEEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
.+.+++||||+++++|.+++.... .+++..+..++.|++.||.|||..+ |+|+||||+|||++.++.++|+|||++
T Consensus 72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeCCCCEEEcccccc
Confidence 788999999999999999997654 6899999999999999999999865 999999999999999999999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~ 636 (683)
........ ...++..|+|||++.... ++.++||||||+++|+|++ |..||......... . .+..
T Consensus 150 ~~~~~~~~--------~~~~~~~~~ape~~~~~~---~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~--~~~~- 214 (256)
T cd05039 150 KEASQGQD--------SGKLPVKWTAPEALREKK---FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-P--HVEK- 214 (256)
T ss_pred cccccccc--------cCCCcccccCchhhcCCc---CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-H--HHhc-
Confidence 87643211 224566799999886443 7889999999999999997 99999766443321 1 1111
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.........+++.+.+||.+||..+|.+||++.+++.
T Consensus 215 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 215 -GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred -CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 1122233468899999999999999999999999875
No 310
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.4e-36 Score=310.62 Aligned_cols=253 Identities=29% Similarity=0.410 Sum_probs=204.3
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
|++..++|.+.+.||.|+||.||+|.+. ++..||||.+..... ....+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~--------~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (261)
T cd05034 1 WEIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM--------SPEAFLQEAQIMKKLRHDKLVQLYAVCS 71 (261)
T ss_pred CccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc--------CHHHHHHHHHHHhhCCCCCEeeeeeeee
Confidence 4577889999999999999999999864 567899998764322 1245788999999999999999999886
Q ss_pred cCCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
+...+++||||+++++|.+++... ..+++..+..++.+|+.||.|||+.+ |+|+||||+||+++.++.++|+|||
T Consensus 72 -~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~~~~~~l~d~g 148 (261)
T cd05034 72 -EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGENLVCKIADFG 148 (261)
T ss_pred -cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcCCCCEEECccc
Confidence 567899999999999999999654 36899999999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
++........ .......++..|+|||.+.... ++.++|||||||++|+|++ |+.||........+.. +
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~---~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~---~- 217 (261)
T cd05034 149 LARLIEDDEY----TAREGAKFPIKWTAPEAANYGR---FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQ---V- 217 (261)
T ss_pred cceeccchhh----hhhhccCCCccccCHHHhccCC---cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---H-
Confidence 9987643211 1111223456899999886433 7889999999999999998 9999976554332211 1
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
......+....++..+.+++.+||..+|.+||++.++..
T Consensus 218 -~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 218 -ERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred -HcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 122334445567899999999999999999999998864
No 311
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1e-36 Score=317.15 Aligned_cols=265 Identities=26% Similarity=0.367 Sum_probs=208.0
Q ss_pred ceeEEEEecccCceEEEEEEEc---cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 404 RYALLNLLGKGGFSEVYKAYDL---VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~---~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
.|.+.+.||+|+||.||++.+. .++..||||++..... .........+..|+.++..+ .||||++++++|. .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~---~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~-~ 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI---VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ-T 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH---HhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-c
Confidence 3788999999999999999754 4678999998754321 12233456788899999999 5999999999986 6
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
+..+|+||||+++++|..++.....+++..+..++.|++.||.|||..+ ++|+||+|.||+++.++.++|+|||++..
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 77 DTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred CCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEEECccccc
Confidence 6788999999999999999977777999999999999999999999855 99999999999999999999999999876
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
+..... .......|++.|+|||++.... ..++.++||||||+++|+|++|..||.............. .....
T Consensus 155 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~~ 227 (288)
T cd05583 155 FLAEEE----ERAYSFCGTIEYMAPEVIRGGS-GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR--RILKS 227 (288)
T ss_pred cccccc----cccccccCCccccCHHHhcCCC-CCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH--HHHcc
Confidence 543311 1122346899999999875432 2367899999999999999999999964332111111001 11112
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccCCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPD---VLTLAQDPYLTYS 681 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS---~~eLl~hP~l~~~ 681 (683)
..+.+..++..+.+||.+||..+|++||| +.++++||||+..
T Consensus 228 ~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 228 KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 23344568899999999999999999998 6778999999763
No 312
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.4e-36 Score=311.61 Aligned_cols=249 Identities=27% Similarity=0.374 Sum_probs=198.7
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|.+.+.||+|+||.||.|... .+..||||.+..... . ...+.+|+.++..++||||++++++|. +...
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~-~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 73 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-S-------EDEFIEEAKVMMKLSHEKLVQLYGVCT-KQRP 73 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcc-c-------HHHHHHHHHHHhcCCCCCeeeEEEEEc-cCCC
Confidence 46889999999999999999653 345699998754321 1 235788999999999999999999886 5667
Q ss_pred EEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||.|||++.++.+||+|||+++...
T Consensus 74 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 74 IYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred cEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCCEEECCCccceecC
Confidence 89999999999999999653 46899999999999999999999965 9999999999999999999999999987654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......++..|+|||++.... ++.++|||||||++|+|++ |..||.......... .+.... .
T Consensus 152 ~~~~~----~~~~~~~~~~y~~pe~~~~~~---~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~---~~~~~~--~ 219 (256)
T cd05113 152 DDEYT----SSVGSKFPVRWSPPEVLLYSK---FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVE---KVSQGL--R 219 (256)
T ss_pred CCcee----ecCCCccChhhCCHHHHhcCc---ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH---HHhcCC--C
Confidence 32111 111224567899999986443 7889999999999999998 999997655433221 111211 2
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.+.....+..+.+++.+||..+|.+||++.+++.+
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 220 LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 22234578999999999999999999999999864
No 313
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.9e-37 Score=319.20 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=200.1
Q ss_pred cceeEEEEecccCceEEEEEEEccC-----CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVE-----HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~-----g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
..|.+.+.||+|+||.||+|.+..+ +..||||++..... ......+..|+.++..++||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 78 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE------GPLREEFKHEAMMRSRLQHPNIVCLLGVVT 78 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence 3577788999999999999986543 57899999754321 123456788999999999999999999886
Q ss_pred cCCceEEEEEecccCCChhHHHhcC----------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcce
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT----------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNV 541 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NI 541 (683)
+....++++||+++++|..++... ..+++..+..++.|++.||.|||+.+ |+||||||.||
T Consensus 79 -~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Ni 155 (283)
T cd05091 79 -KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNV 155 (283)
T ss_pred -CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhhe
Confidence 566789999999999999998421 24788889999999999999999865 99999999999
Q ss_pred EeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 005678 542 LFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGH 620 (683)
Q Consensus 542 LLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~ 620 (683)
|++.++.+||+|||+++.+..... ........+++.|+|||.+.... ++.++|||||||++|+|++ |..||..
T Consensus 156 l~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~~g~~p~~~ 229 (283)
T cd05091 156 LVFDKLNVKISDLGLFREVYAADY---YKLMGNSLLPIRWMSPEAIMYGK---FSIDSDIWSYGVVLWEVFSYGLQPYCG 229 (283)
T ss_pred EecCCCceEecccccccccccchh---eeeccCccCCccccCHHHHhcCC---CCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999886643211 11223345678999999886443 7889999999999999998 8889976
Q ss_pred CchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 621 DQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 621 ~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
....+ ++. .+.... ..+....++..+.+||.+||+.+|.+||++.+++..
T Consensus 230 ~~~~~-~~~--~i~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 230 YSNQD-VIE--MIRNRQ--VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred CCHHH-HHH--HHHcCC--cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 55443 221 111111 123345789999999999999999999999999863
No 314
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8.3e-37 Score=315.88 Aligned_cols=256 Identities=30% Similarity=0.455 Sum_probs=202.1
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCCceE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~~~~ 483 (683)
|.+.+.||.|+||+||+|.+..++..|+||.+........ .....+|+..+..++ ||||++++++|. +++.+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~e~~~l~~~~~h~~i~~~~~~~~-~~~~~ 73 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE------ECMNLREVKSLRKLNEHPNIVKLKEVFR-ENDEL 73 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh------HHHHHHHHHHHHhccCCCCchhHHHHhh-cCCcE
Confidence 6788999999999999999988999999998754322111 123456889999999 999999999997 57889
Q ss_pred EEEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
++||||+ +++|..++.... .+++..+..++.|++.+|.|||+.+ |+|+||+|+||+++.++.++|+|||++....
T Consensus 74 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~ 150 (283)
T cd07830 74 YFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSGPEVVKIADFGLAREIR 150 (283)
T ss_pred EEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCCEEEeecccceecc
Confidence 9999999 789998886543 7899999999999999999999865 9999999999999999999999999998664
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH------
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK------ 635 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~------ 635 (683)
.... .....|+..|+|||++... ..++.++|+||||+++|+|++|.+||......+.+........
T Consensus 151 ~~~~------~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (283)
T cd07830 151 SRPP------YTDYVSTRWYRAPEILLRS--TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQD 222 (283)
T ss_pred CCCC------cCCCCCcccccCceeeecC--cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhh
Confidence 3211 1223688999999987533 2368899999999999999999999976654443322111000
Q ss_pred ---------hhccCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 ---------ARKVEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 ---------~~~~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....++. .+..+..+.+||++||..+|.+||++.+++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 223 WPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00000000 12336889999999999999999999999999997
No 315
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.6e-37 Score=323.87 Aligned_cols=250 Identities=24% Similarity=0.364 Sum_probs=196.7
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeE--EEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRY--VACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~--VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
+.|.+.+.||+|+||.||+|.+..++.. +|+|.+.... .......+.+|+.++.++ +||||++++++|. +
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-~ 79 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA------SKDDHRDFAGELEVLCKLGHHPNIINLLGACE-H 79 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC------CHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-C
Confidence 4688999999999999999998777754 5776653211 112345778899999999 8999999999986 5
Q ss_pred CceEEEEEecccCCChhHHHhcC----------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEe
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKAT----------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLF 543 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILL 543 (683)
.+.+++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili 157 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILV 157 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEe
Confidence 67899999999999999999643 25789999999999999999999865 9999999999999
Q ss_pred CCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCc
Q 005678 544 DEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQ 622 (683)
Q Consensus 544 d~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~ 622 (683)
+.++.+||+|||++...... .......+++.|+|||++... .++.++|||||||++|+|++ |..||....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~ 228 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVY------VKKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 228 (303)
T ss_pred cCCCcEEeCccccCcccchh------hhcccCCCcccccCHHHHhcc---CCcccccchhhhhHHHHHHhcCCCCcccCC
Confidence 99999999999998643211 111122456779999987543 37889999999999999998 999997655
Q ss_pred hHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 623 TQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 623 ~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
..+.. . .+ ......+.+..++.++.+||.+||..+|.+||++.+++.+
T Consensus 229 ~~~~~-~--~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 229 CAELY-E--KL--PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred hHHHH-H--HH--hcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 43322 1 11 1112222334578999999999999999999999999864
No 316
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-36 Score=321.88 Aligned_cols=258 Identities=26% Similarity=0.388 Sum_probs=203.2
Q ss_pred cccccccceeEEEEecccCceEEEEEEEc-------cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCc
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDL-------VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHH 468 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~-------~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~Hpn 468 (683)
.|.+..++|.+.+.||+|+||.||+|.+. .....||+|++..... ......+..|+.+++.+ .|||
T Consensus 6 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h~~ 79 (314)
T cd05099 6 KWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT------DKDLADLISEMELMKLIGKHKN 79 (314)
T ss_pred cccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC------hHHHHHHHHHHHHHHhccCCCC
Confidence 45667789999999999999999999753 2345799998754321 12245688899999999 6999
Q ss_pred eeeeccccccCCceEEEEEecccCCChhHHHhcC----------------CCcchHHHHHHHHHHHHHHHHHHhcCCceE
Q 005678 469 IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT----------------PVLPEREARIIIVQIFQGLIYLNKRAQKII 532 (683)
Q Consensus 469 IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~II 532 (683)
|++++++|. +.+.+++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+
T Consensus 80 iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~ 156 (314)
T cd05099 80 IINLLGVCT-QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR--CI 156 (314)
T ss_pred eeeEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC--ee
Confidence 999999886 667889999999999999999542 34888999999999999999999865 99
Q ss_pred ecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH
Q 005678 533 HYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML 612 (683)
Q Consensus 533 HrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL 612 (683)
|+||||+|||++.++.+||+|||+++........ .......+++.|+|||++.... ++.++|||||||++|+|+
T Consensus 157 H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~el~ 230 (314)
T cd05099 157 HRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY---KKTSNGRLPVKWMAPEALFDRV---YTHQSDVWSFGILMWEIF 230 (314)
T ss_pred eccccceeEEEcCCCcEEEccccccccccccccc---cccccCCCCccccCHHHHccCC---cCccchhhHHHHHHHHHH
Confidence 9999999999999999999999999866432111 1122234557899999886433 789999999999999999
Q ss_pred c-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 613 F-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 613 t-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
+ |..||......+.. . .+... ........++.++.+||.+||..+|.+||++.+++.
T Consensus 231 ~~g~~p~~~~~~~~~~-~--~~~~~--~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 231 TLGGSPYPGIPVEELF-K--LLREG--HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred hCCCCCCCCCCHHHHH-H--HHHcC--CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 8 89999765543322 1 11111 112223568889999999999999999999999875
No 317
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=9.5e-37 Score=328.06 Aligned_cols=263 Identities=27% Similarity=0.407 Sum_probs=205.3
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
..+.++|.+.+.||+|+||.||+|.+..++..||||.+...... ......+.+|+.++..++||||++++++|..
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-----IIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred hhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-----hHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 34568899999999999999999999999999999987543211 1123467789999999999999999998753
Q ss_pred C-----CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEe
Q 005678 479 D-----QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTD 553 (683)
Q Consensus 479 d-----~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~D 553 (683)
. ...+|++++++ +++|..++... .+++..+..++.||+.||.|||+.+ |+|+||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~d 163 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILD 163 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcCCCCEEEec
Confidence 2 23578888887 78998888655 5899999999999999999999965 99999999999999999999999
Q ss_pred cCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Q 005678 554 FGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI 633 (683)
Q Consensus 554 FGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i 633 (683)
||++...... .....|+++|+|||.+... ..++.++|||||||++|+|++|..||...............
T Consensus 164 fg~~~~~~~~--------~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (345)
T cd07877 164 FGLARHTDDE--------MTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 233 (345)
T ss_pred cccccccccc--------ccccccCCCccCHHHHhCc--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 9998765322 1223688999999987532 23788999999999999999999999655433322110000
Q ss_pred --------------------HHh----hccCCCC-CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 634 --------------------IKA----RKVEFPS-RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 634 --------------------~~~----~~~~~p~-~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
... ....+.. ....+.++.+||.+||.++|.+||++.+++.||||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 234 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred hCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 000 0000000 1235788999999999999999999999999999974
No 318
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.5e-37 Score=317.29 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=200.7
Q ss_pred cccceeEEEEecccCceEEEEEEE-----ccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYD-----LVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDT 475 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d-----~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~ 475 (683)
...+|.+...||+|+||.||++.. ..++..||+|.+.... ......+.+|+.+++.+.||||++++++
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 75 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-------ESARQDFQREAELLTVLQHQHIVRFYGV 75 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-------HHHHHHHHHHHHHHhcCCCCCCceEEEE
Confidence 345788899999999999999964 2356789999864321 1224578899999999999999999998
Q ss_pred cccCCceEEEEEecccCCChhHHHhcCC---------------CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcc
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLKATP---------------VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGN 540 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~~~~---------------~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~N 540 (683)
+. +.+.+++||||+++++|.+++...+ .+++..+..++.||+.||.|||+.+ |+|+||||+|
T Consensus 76 ~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~n 152 (280)
T cd05092 76 CT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRN 152 (280)
T ss_pred Ee-cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhh
Confidence 86 6678999999999999999996542 4789999999999999999999865 9999999999
Q ss_pred eEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCC
Q 005678 541 VLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFG 619 (683)
Q Consensus 541 ILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~ 619 (683)
||+++++.+||+|||++..+..... ........+++.|+|||++.... ++.++|||||||++|+|++ |.+||.
T Consensus 153 il~~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~el~~~g~~p~~ 226 (280)
T cd05092 153 CLVGQGLVVKIGDFGMSRDIYSTDY---YRVGGRTMLPIRWMPPESILYRK---FTTESDIWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred EEEcCCCCEEECCCCceeEcCCCce---eecCCCccccccccCHHHhccCC---cCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 9999999999999999976543211 11122234578899999886444 7999999999999999998 999997
Q ss_pred CCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 620 HDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 620 ~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+.... +.... .......+++.+.+||.+||..+|.+||++.+++.
T Consensus 227 ~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 227 QLSNTEAIEC---ITQGR--ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred cCCHHHHHHH---HHcCc--cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 6554433211 11111 22333468899999999999999999999999874
No 319
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.3e-36 Score=314.09 Aligned_cols=256 Identities=32% Similarity=0.526 Sum_probs=198.6
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc---CCCceeeeccccccCCc
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL---VHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L---~HpnIV~L~~~f~~d~~ 481 (683)
|.+.+.||.|+||.||+|.+..++..||+|.+....... .....+.+|+.++..+ .||||++++++|. +..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~-~~~ 74 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-----GIPLSTLREIALLKQLESFEHPNIVRLLDVCH-GPR 74 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-----hhhhhHHHHHHHHHHhhccCCCCcceEEEEEe-ecc
Confidence 678899999999999999998889999999986543211 1123455677777666 5999999999986 334
Q ss_pred e-----EEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEec
Q 005678 482 T-----FCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDF 554 (683)
Q Consensus 482 ~-----~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DF 554 (683)
. ++++|||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+|||++.++.++|+||
T Consensus 75 ~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~~~~~~l~df 151 (287)
T cd07838 75 TDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTSDGQVKIADF 151 (287)
T ss_pred CCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEccCCCEEEecc
Confidence 3 899999996 4898888653 35899999999999999999999965 999999999999999999999999
Q ss_pred CCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH
Q 005678 555 GLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 555 Gls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~ 634 (683)
|++........ .....+++.|+|||++.... ++.++|||||||++|+|++|.+||......+.+...-...
T Consensus 152 g~~~~~~~~~~------~~~~~~~~~~~~PE~~~~~~---~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd07838 152 GLARIYSFEMA------LTSVVVTLWYRAPEVLLQSS---YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVI 222 (287)
T ss_pred CcceeccCCcc------cccccccccccChHHhccCC---CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHc
Confidence 99977643311 12235788999999986443 7889999999999999999999997766544332111000
Q ss_pred H-hhccC-----------CCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 635 K-ARKVE-----------FPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 635 ~-~~~~~-----------~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
. ..... ++. .+.++..+.+||.+||..+|.+||++.+++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 223 GLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred CCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0 00000 000 12456788999999999999999999999999997
No 320
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1e-36 Score=319.15 Aligned_cols=259 Identities=22% Similarity=0.357 Sum_probs=200.7
Q ss_pred cccceeEEEEecccCceEEEEEEEcc----------------CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLV----------------EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL 464 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~----------------~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L 464 (683)
..++|.+.+.||+|+||.||++.+.. ++..||||++.... .......+.+|+.+++.+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~------~~~~~~~~~~E~~~l~~l 76 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA------NKNARNDFLKEIKIMSRL 76 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC------CHHHHHHHHHHHHHHHhC
Confidence 35679999999999999999985432 34579999875432 112245788999999999
Q ss_pred CCCceeeeccccccCCceEEEEEecccCCChhHHHhcCC-----------CcchHHHHHHHHHHHHHHHHHHhcCCceEe
Q 005678 465 VHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATP-----------VLPEREARIIIVQIFQGLIYLNKRAQKIIH 533 (683)
Q Consensus 465 ~HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~-----------~Lse~~~~~I~~qIa~aL~yLH~~g~~IIH 533 (683)
+||||+++++++. +.+.+++||||+++++|..++.... .+++..+..++.||+.||.|||+.+ |+|
T Consensus 77 ~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H 153 (296)
T cd05095 77 KDPNIIRLLAVCI-TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN--FVH 153 (296)
T ss_pred CCCCcceEEEEEe-cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--eec
Confidence 9999999999886 5677899999999999999986532 3677889999999999999999865 999
Q ss_pred cccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc
Q 005678 534 YDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF 613 (683)
Q Consensus 534 rDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt 613 (683)
+||||+|||++.++.++|+|||++..+..... ........+++.|++||+..... ++.++|||||||++|+|++
T Consensus 154 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~---~~~~~DiwSlG~~l~el~~ 227 (296)
T cd05095 154 RDLATRNCLVGKNYTIKIADFGMSRNLYSGDY---YRIQGRAVLPIRWMSWESILLGK---FTTASDVWAFGVTLWEILT 227 (296)
T ss_pred ccCChheEEEcCCCCEEeccCcccccccCCcc---eeccCcCcCccccCCHHHHhcCC---ccchhhhhHHHHHHHHHHH
Confidence 99999999999999999999999986543211 11122234567899999875443 8999999999999999998
Q ss_pred --CCCCCCCCchHHHHHHHHHHHHh--hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 614 --GRRPFGHDQTQERILREDTIIKA--RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 614 --G~~PF~~~~~~e~il~~~~i~~~--~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
|..||......+.+......... ....++..+.++..+.+||.+||..||.+||++.++++
T Consensus 228 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 228 LCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred hCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 77899765544333221111111 12234445678899999999999999999999999864
No 321
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.7e-36 Score=312.27 Aligned_cols=254 Identities=26% Similarity=0.412 Sum_probs=202.4
Q ss_pred ccccceeEEEEecccCceEEEEEEEccC---CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVE---HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~---g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
+..++|.+.+.||.|+||.||+|.+... ...||||....... ......+.+|+.+++.+.||||+++++++
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 76 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS------PSVREKFLQEAYIMRQFDHPHIVKLIGVI 76 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC------HHHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence 4566799999999999999999987544 45799998754321 12345788899999999999999999988
Q ss_pred ccCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
. ....++||||+++++|.+++... ..+++..+..++.+|+.||.|||+.+ ++|+||||+|||++.++.++|+|||
T Consensus 77 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g 152 (270)
T cd05056 77 T--ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSSPDCVKLGDFG 152 (270)
T ss_pred c--CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEecCCCeEEccCc
Confidence 6 35678999999999999999754 35899999999999999999999855 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
++........ .......+++.|+|||.+.... ++.++|||||||++|+|++ |..||......+.... +.
T Consensus 153 ~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~---~~ 222 (270)
T cd05056 153 LSRYLEDESY----YKASKGKLPIKWMAPESINFRR---FTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR---IE 222 (270)
T ss_pred eeeecccccc----eecCCCCccccccChhhhccCC---CCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH---HH
Confidence 9987654311 1112234567899999875433 7899999999999999986 9999977665443221 11
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.. ...+.++.++..+.+||.+||..+|.+|||+.+++..
T Consensus 223 ~~--~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 223 NG--ERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred cC--CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11 2233446789999999999999999999999998753
No 322
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.4e-36 Score=324.14 Aligned_cols=266 Identities=26% Similarity=0.404 Sum_probs=204.5
Q ss_pred ceeEEEEecccCceEEEEEEEccC--CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecccccc--
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVE--HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEI-- 478 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~--g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~-- 478 (683)
+|.+.+.||.|+||.||++.+..+ +..||||.+...... ....+.+.+|+.++..+ .||||+++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-----KILAKRALRELKLLRHFRGHKNITCLYDMDIVFP 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-----chhHHHHHHHHHHHHHhcCCCChheeeeeeeecc
Confidence 488999999999999999998877 899999987532211 12245678899999999 59999999987532
Q ss_pred -CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 479 -DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 479 -d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
....++++++|+. ++|..++.....+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||++
T Consensus 76 ~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 76 GNFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred ccCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 2345788999985 699999987788999999999999999999999865 999999999999999999999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH-----
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT----- 632 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~----- 632 (683)
.......... ........||+.|+|||.+... ..++.++|||||||++|+|++|.+||........+.....
T Consensus 153 ~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (332)
T cd07857 153 RGFSENPGEN-AGFMTEYVATRWYRAPEIMLSF--QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTP 229 (332)
T ss_pred eecccccccc-cccccCcccCccccCcHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCC
Confidence 8665332111 1112234789999999987532 2378899999999999999999999976543221110000
Q ss_pred ---------------HHHh----hccCCC-CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 633 ---------------IIKA----RKVEFP-SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 633 ---------------i~~~----~~~~~p-~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.... ....++ ..+.++..+.+||.+||.++|.+|||+.+++.||||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~ 297 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI 297 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence 0000 001111 12356889999999999999999999999999999963
No 323
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-36 Score=310.29 Aligned_cols=247 Identities=21% Similarity=0.308 Sum_probs=199.2
Q ss_pred EEecccCceEEEEEEEcc-CC--eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEE
Q 005678 409 NLLGKGGFSEVYKAYDLV-EH--RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~-~g--~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~L 485 (683)
+.||.|+||.||+|.+.. .+ ..||||.+...... ...+.+.+|+.++++++||||+++++.+. + ..+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~-~~~~~ 72 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------DIMDDFLKEAAIMHSLDHENLIRLYGVVL-T-HPLMM 72 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------HHHHHHHHHHHHHhhcCCCCccceeEEEc-C-CeEEE
Confidence 368999999999998755 33 36999987554321 44678899999999999999999999986 3 88999
Q ss_pred EEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 486 VLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
||||+++++|..++... ..+++..+..++.|++.||.|||..+ ++|+||+|+|||++.++.+||+|||++..+...
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 73 VTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150 (257)
T ss_pred EEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEecCCEEEecccccccccccc
Confidence 99999999999999654 36899999999999999999999865 999999999999999999999999999877543
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFP 642 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p 642 (683)
... ........++..|+|||++.... ++.++|||||||++|+|++ |..||......+..... ......++
T Consensus 151 ~~~--~~~~~~~~~~~~y~~pE~~~~~~---~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~ 221 (257)
T cd05040 151 EDH--YVMEEHLKVPFAWCAPESLRTRT---FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI----DKEGERLE 221 (257)
T ss_pred ccc--eecccCCCCCceecCHHHhcccC---cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HhcCCcCC
Confidence 221 11222456788999999886444 7889999999999999998 99999766554422211 11222333
Q ss_pred CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 643 SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 643 ~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
....++..+.+++.+||..+|.+||++.+++.
T Consensus 222 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 222 RPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 34467899999999999999999999999875
No 324
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.2e-36 Score=317.47 Aligned_cols=251 Identities=25% Similarity=0.390 Sum_probs=198.1
Q ss_pred ceeEEEEecccCceEEEEEEEcc-----CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLV-----EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~-----~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
+|.+.+.||+|+||.||+|.+.. ....|++|.+..... ......+.+|+.+++.++||||+++++.|.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~- 73 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS------SSELRDLLSEFNLLKQVNHPHVIKLYGACS- 73 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC------HHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-
Confidence 47788999999999999998643 336799998754321 122467889999999999999999999886
Q ss_pred CCceEEEEEecccCCChhHHHhcC------------------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEec
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKAT------------------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHY 534 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~------------------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHr 534 (683)
..+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+
T Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~ 151 (290)
T cd05045 74 QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHR 151 (290)
T ss_pred cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehh
Confidence 567788999999999999998532 24788899999999999999999865 9999
Q ss_pred ccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-
Q 005678 535 DLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF- 613 (683)
Q Consensus 535 DLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt- 613 (683)
||||+|||+++++.+||+|||++......... .......++..|+|||++... .++.++||||||+++|+|++
T Consensus 152 dikp~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~~l~el~t~ 225 (290)
T cd05045 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSY---VKRSKGRIPVKWMAIESLFDH---IYTTQSDVWSFGVLLWEIVTL 225 (290)
T ss_pred hhhhheEEEcCCCcEEeccccccccccCccch---hcccCCCCCccccCHHHHccC---CcchHhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999765432111 011223456789999987543 37899999999999999998
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 614 GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 614 G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
|..||....... +... .......+.+..++.++.+||.+||..+|.+||++.+++.
T Consensus 226 g~~p~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 226 GGNPYPGIAPER-LFNL----LKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCCCCCCCCHHH-HHHH----HhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 999997654433 2211 1122233444568899999999999999999999999875
No 325
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.6e-37 Score=322.94 Aligned_cols=259 Identities=25% Similarity=0.385 Sum_probs=207.1
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
...|...+.||.|+||.||+|.+..++..||||.+....... ......+.+|+.+++.++||||+++++++. +.+
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~ 88 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-REH 88 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC----hHHHHHHHHHHHHHHhCCCCCcccEEEEEE-cCC
Confidence 345777888999999999999999999999999875432221 123456788999999999999999999886 667
Q ss_pred eEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 482 TFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.+++||||+. ++|.+++. ....+++..+..++.+++.||.|||+.+ ++|+||+|.|||++.++.++|+|||++...
T Consensus 89 ~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 165 (308)
T cd06634 89 TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIM 165 (308)
T ss_pred eeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECCCCcEEECCcccceee
Confidence 8899999996 57777764 4456899999999999999999999865 999999999999999999999999998765
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
... ....|++.|+|||.+.......++.++|||||||++|+|++|..||........... +.... ..
T Consensus 166 ~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~-~~ 232 (308)
T cd06634 166 APA---------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQNE-SP 232 (308)
T ss_pred cCc---------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHH---HhhcC-CC
Confidence 322 123688999999997543333478899999999999999999999976554332221 11111 11
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
......++..+.+||.+||..+|.+||++.+++.|||+...
T Consensus 233 ~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 233 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 11234688899999999999999999999999999998754
No 326
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=7.4e-37 Score=321.24 Aligned_cols=253 Identities=23% Similarity=0.375 Sum_probs=205.8
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEE
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
...||+|+||.||++.+..++..||||.+..... .....+.+|+.+++.++||||++++++|. ..+..++||
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~ 96 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ-------QRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVM 96 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch-------hHHHHHHHHHHHHHhcCCcchhheeeEEE-eCCEEEEEE
Confidence 4679999999999999989999999998743211 12356888999999999999999999986 677899999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
||+++++|..++... .+++..+..++.|++.||.|||+.+ |+|+||+|.||+++.++.++|+|||++.........
T Consensus 97 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~- 172 (292)
T cd06657 97 EFLEGGALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 172 (292)
T ss_pred ecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEcccccceeccccccc-
Confidence 999999999987654 5899999999999999999999965 999999999999999999999999998765432111
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
.....|++.|+|||.+.... ++.++|+|||||++|+|++|..||........... +.......+.....+
T Consensus 173 ----~~~~~~~~~y~~pE~~~~~~---~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 242 (292)
T cd06657 173 ----RKSLVGTPYWMAPELISRLP---YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---IRDNLPPKLKNLHKV 242 (292)
T ss_pred ----ccccccCccccCHHHhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhhCCcccCCcccC
Confidence 12236889999999875433 78899999999999999999999976554332211 111122223333467
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
+..+.+||.+||..+|.+||++.+++.||||...+
T Consensus 243 ~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 243 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred CHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 89999999999999999999999999999997653
No 327
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-36 Score=325.07 Aligned_cols=260 Identities=24% Similarity=0.373 Sum_probs=206.0
Q ss_pred ccccccccceeEEEEecccCceEEEEEEEcc-------CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCC
Q 005678 396 NNFQILNHRYALLNLLGKGGFSEVYKAYDLV-------EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHH 467 (683)
Q Consensus 396 ~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~-------~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~Hp 467 (683)
.+|.+...+|.+.+.||+|+||.||+|.+.. ....||+|++.... .......+.+|+.++.++ +||
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~~h~ 78 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA------TDKDLSDLVSEMEMMKMIGKHK 78 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc------CHHHHHHHHHHHHHHHhhcCCC
Confidence 5678888899999999999999999997643 23479999875321 112356788999999999 799
Q ss_pred ceeeeccccccCCceEEEEEecccCCChhHHHhcC----------------CCcchHHHHHHHHHHHHHHHHHHhcCCce
Q 005678 468 HIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT----------------PVLPEREARIIIVQIFQGLIYLNKRAQKI 531 (683)
Q Consensus 468 nIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~----------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~I 531 (683)
||++++++|. +.+.+++||||+++++|.+++... ..+++..+..++.||+.||.|||..+ |
T Consensus 79 ~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i 155 (334)
T cd05100 79 NIINLLGACT-QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK--C 155 (334)
T ss_pred CeeeeeEEEc-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--e
Confidence 9999999986 567889999999999999999643 24778888999999999999999865 9
Q ss_pred EecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHH
Q 005678 532 IHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQM 611 (683)
Q Consensus 532 IHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyEL 611 (683)
+|+||||.|||++.++.+||+|||+++....... ......+.+++.|+|||.+.... ++.++|||||||++|+|
T Consensus 156 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~el 229 (334)
T cd05100 156 IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY---YKKTTNGRLPVKWMAPEALFDRV---YTHQSDVWSFGVLLWEI 229 (334)
T ss_pred eccccccceEEEcCCCcEEECCcccceecccccc---cccccCCCcCceEcCHHHhccCC---cCchhhhHHHHHHHHHH
Confidence 9999999999999999999999999986543211 11122334567899999886443 78899999999999999
Q ss_pred Hc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 612 LF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 612 Lt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
++ |..||......+.. . .+. .....+....++..+.+||.+||..+|.+||++.+++.+
T Consensus 230 ~~~g~~p~~~~~~~~~~-~--~~~--~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 230 FTLGGSPYPGIPVEELF-K--LLK--EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HhcCCCCCCCCCHHHHH-H--HHH--cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 98 88999766543322 1 111 112223335678999999999999999999999999875
No 328
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.3e-37 Score=349.04 Aligned_cols=269 Identities=17% Similarity=0.241 Sum_probs=191.0
Q ss_pred cccceeEEEEecccCceEEEEEEEccC-CeEEEEEEeccCccc----------chhhHHHHHHHHHHHHHHHhhcCCCce
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVE-HRYVACKLHGLNAQW----------SEDKKQSYIRHAIREYNIHKTLVHHHI 469 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~-g~~VAVKi~~~~~~~----------~~~~~~~~i~~~~rEi~il~~L~HpnI 469 (683)
+..+|.+++.||+|+||+||+|..... +..+++|.+...... ...........+.+|+.++..++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 456899999999999999999865432 222222211110000 000111234567899999999999999
Q ss_pred eeeccccccCCceEEEEEecccCCChhHHHhcC-----CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC
Q 005678 470 VRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT-----PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD 544 (683)
Q Consensus 470 V~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~-----~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd 544 (683)
|++++++. +.+..|+|++++ +++|..++... .......++.|+.||+.||.|||+.+ ||||||||+||||+
T Consensus 226 v~l~~~~~-~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g--IiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILR-SEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK--LIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEE-ECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEC
Confidence 99999987 567788999999 45777766332 22346677889999999999999865 99999999999999
Q ss_pred CCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCC-CCCCCc-
Q 005678 545 EFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRR-PFGHDQ- 622 (683)
Q Consensus 545 ~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~-PF~~~~- 622 (683)
.+|.+||+|||+++.+..... .......||+.|+|||++.... ++.++|||||||+||+|++|.. ||....
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKERE----AFDYGWVGTVATNSPEILAGDG---YCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred CCCCEEEEeCCCceecCcccc----cccccccCCcCCCCchhhcCCC---CCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 999999999999987653321 1122347999999999987544 8999999999999999999875 554322
Q ss_pred -hHHHHHHHHHHHHhhccCCCC--------------------------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 623 -TQERILREDTIIKARKVEFPS--------------------------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 623 -~~e~il~~~~i~~~~~~~~p~--------------------------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
....+.............+|. ...++.++.++|.+||.+||.+||++.+++.|
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 111121110000000001110 12356778899999999999999999999999
Q ss_pred cccCC
Q 005678 676 PYLTY 680 (683)
Q Consensus 676 P~l~~ 680 (683)
|||..
T Consensus 455 p~f~~ 459 (501)
T PHA03210 455 PLFSA 459 (501)
T ss_pred hhhhc
Confidence 99974
No 329
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.7e-36 Score=316.82 Aligned_cols=251 Identities=25% Similarity=0.389 Sum_probs=199.3
Q ss_pred cceeEEEEecccCceEEEEEEEc-----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDL-----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~-----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
..|.+.+.||+|+||.||+|.+. .++..|++|.+.... ......+.+|+.+++.++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 77 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-------LAARKDFQREAELLTNLQHEHIVKFYGVCG 77 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-------HHHHHHHHHHHHHHhcCCCCCcceEEEEEc
Confidence 46889999999999999999753 345679999874322 122356788999999999999999999986
Q ss_pred cCCceEEEEEecccCCChhHHHhcCC----------------CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcce
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKATP----------------VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNV 541 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~~----------------~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NI 541 (683)
+...+++||||+++++|.+++..++ .+++..++.++.||+.||.|||+.+ |+|+||||.||
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Ni 154 (291)
T cd05094 78 -DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNC 154 (291)
T ss_pred -cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceE
Confidence 6678999999999999999996532 3789999999999999999999865 99999999999
Q ss_pred EeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 005678 542 LFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGH 620 (683)
Q Consensus 542 LLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~ 620 (683)
|++.++.++|+|||++........ ........|++.|+|||.+.... ++.++|||||||++|+|++ |..||..
T Consensus 155 l~~~~~~~~l~dfg~a~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~el~t~g~~p~~~ 228 (291)
T cd05094 155 LVGANLLVKIGDFGMSRDVYSTDY---YRVGGHTMLPIRWMPPESIMYRK---FTTESDVWSFGVILWEIFTYGKQPWFQ 228 (291)
T ss_pred EEccCCcEEECCCCcccccCCCce---eecCCCCCcceeecChHHhccCC---CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999976543211 11122345788899999886443 7889999999999999998 9999976
Q ss_pred CchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 621 DQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 621 ~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
....+.+ . .+.... .......++..+.+||.+||..+|.+||++.++++
T Consensus 229 ~~~~~~~-~--~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 229 LSNTEVI-E--CITQGR--VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CCHHHHH-H--HHhCCC--CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 5554322 1 111111 11223457899999999999999999999999874
No 330
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1e-36 Score=314.09 Aligned_cols=258 Identities=33% Similarity=0.532 Sum_probs=205.9
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
|.+...||.|+||.||+|.+..++..||+|++..... .......+..|+.+++.++||||+++++++. +...++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~ 74 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-----EEGIPSTALREISLLKELKHPNIVKLLDVIH-TERKLY 74 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-----cccccHHHHHHHHHHHhcCCCCHHHHHhhhh-cCCceE
Confidence 5677889999999999999999999999999865431 1122356678999999999999999999986 668899
Q ss_pred EEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 485 TVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
+||||++ ++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 75 ~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~ 151 (282)
T cd07829 75 LVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINRDGVLKLADFGLARAFGIP 151 (282)
T ss_pred EEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence 9999997 5899999765 57999999999999999999999965 999999999999999999999999999876433
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH--------
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK-------- 635 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~-------- 635 (683)
.. ......++..|+|||++... ..++.++|||||||++|+|++|.+||........+........
T Consensus 152 ~~-----~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (282)
T cd07829 152 LR-----TYTHEVVTLWYRAPEILLGS--KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP 224 (282)
T ss_pred cc-----ccCccccCcCcCChHHhcCC--cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHH
Confidence 21 12223567889999998643 2378899999999999999999999977665443322111000
Q ss_pred ----h--hccCCCC---------CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 ----A--RKVEFPS---------RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 ----~--~~~~~p~---------~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
. ....++. .+.++..+.+||.+||..+|.+||++.+++.||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 225 GVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred hhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0 0011111 13457889999999999999999999999999998
No 331
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-38 Score=322.33 Aligned_cols=267 Identities=26% Similarity=0.400 Sum_probs=217.5
Q ss_pred ceeE-EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCc
Q 005678 404 RYAL-LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 404 ry~l-~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~ 481 (683)
-|.+ .+.||+|+|+.|--|....+|..||||++..... .....+.||++++.+. .|+||+.|+++|+ +..
T Consensus 78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g-------HsR~RvfREVe~f~~Cqgh~nilqLiefFE-dd~ 149 (463)
T KOG0607|consen 78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG-------HSRSRVFREVETFYQCQGHKNILQLIEFFE-DDT 149 (463)
T ss_pred HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCc-------hHHHHHHHHHHHHHHhcCCccHHHHHHHhc-ccc
Confidence 3444 3679999999999999999999999999855421 1235788999999999 5999999999997 788
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC---cEEEEecCCcc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG---VAKVTDFGLSK 558 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g---~vKL~DFGls~ 558 (683)
.||||||-|.||+|..+|.+...+++.++..++.+|+.||.|||.+| |.||||||.|||..... -+|||||.+..
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKG--IAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred eEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcC--cccccCCccceeecCCCCcCceeeecccccc
Confidence 99999999999999999998889999999999999999999999977 99999999999997543 58999999875
Q ss_pred ccccCc--CCCcccccccCCCCCccCCcccccc--cCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHH------
Q 005678 559 IVEDDV--GSQGMELTSQGAGTYWYLPPECFEL--SKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERIL------ 628 (683)
Q Consensus 559 ~~~~~~--~~~~~~l~~~~~GT~~Y~APE~~~~--~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il------ 628 (683)
-+.... .....+-...++|+..|||||+... +....|+.++|.||||||+|-||+|.+||-+.-..+.-+
T Consensus 228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C 307 (463)
T KOG0607|consen 228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC 307 (463)
T ss_pred ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence 443221 1111122335689999999998653 224569999999999999999999999995432211110
Q ss_pred -----HHHHHHHhhccCCCC--CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 629 -----REDTIIKARKVEFPS--RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 629 -----~~~~i~~~~~~~~p~--~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..-.-++.+.++||+ |..+|.+++++|..+|..++..|.++.++++|||++.
T Consensus 308 r~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~ 366 (463)
T KOG0607|consen 308 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQR 366 (463)
T ss_pred HHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence 112335678899996 5689999999999999999999999999999999985
No 332
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.6e-36 Score=312.90 Aligned_cols=254 Identities=26% Similarity=0.379 Sum_probs=203.5
Q ss_pred ccceeEEEEecccCceEEEEEEEcc-----CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLV-----EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~-----~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
...|.++..||.|+||.||+|.... ....|++|.+.... .......+.+|+.+++.++||||++++++|
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 77 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK------DENLQSEFRRELDMFRKLSHKNVVRLLGLC 77 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc------chHHHHHHHHHHHHHHhcCCcceeeeEEEE
Confidence 3578899999999999999998643 35679999864321 123456788999999999999999999988
Q ss_pred ccCCceEEEEEecccCCChhHHHhcCC---------CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKATP---------VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~~~---------~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g 547 (683)
. +...+|+||||+++++|.+++.... .+++..+..++.||+.||.|||+.+ |+|+||||.|||++.++
T Consensus 78 ~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~~~ 154 (275)
T cd05046 78 R-EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSSQR 154 (275)
T ss_pred C-CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeCCC
Confidence 5 6678899999999999999997554 6899999999999999999999865 99999999999999999
Q ss_pred cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHH
Q 005678 548 VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQER 626 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~ 626 (683)
.++|+|||++........ .......+++.|+|||++.... ++.++|||||||++|+|++ |..||.......
T Consensus 155 ~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~---~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~- 226 (275)
T cd05046 155 EVKVSLLSLSKDVYNSEY----YKLRNALIPLRWLAPEAVQEDD---FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE- 226 (275)
T ss_pred cEEEcccccccccCcccc----cccCCceeEEeecChhhhccCC---CCchhhHHHHHHHHHHHHhCCCCCccccchHH-
Confidence 999999999875432211 1122335677899999876433 6889999999999999998 889996544432
Q ss_pred HHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 627 ILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 627 il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
++. ........++....++..+.++|.+||..+|.+||++.+++..
T Consensus 227 ~~~---~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 227 VLN---RLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHH---HHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 221 1222333445556789999999999999999999999999864
No 333
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-36 Score=316.61 Aligned_cols=259 Identities=24% Similarity=0.328 Sum_probs=199.9
Q ss_pred ceeEEEEecccCceEEEEEEE----ccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 404 RYALLNLLGKGGFSEVYKAYD----LVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d----~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
-|.+++.||+|+||.||+|.. ..++..||+|.+..... ......+.+|+.+++.+.||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG------GNHIADLKKEIEILRNLYHENIVKYKGICTED 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc------HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 468899999999999999963 45688999998754321 12245788999999999999999999988644
Q ss_pred -CceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 480 -QNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 480 -~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
...+++||||++|++|.+++... ..+++..+..++.+|+.||.|||+.+ |+|+||||+|||++.++.++|+|||++
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcCCCCEEECCCccc
Confidence 36788999999999999999654 46899999999999999999999865 999999999999999999999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHH----------H
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQER----------I 627 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~----------i 627 (683)
..+...... ........|+..|+|||++.... ++.++|||||||++|+|+++..|+........ .
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~---~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd05079 157 KAIETDKEY--YTVKDDLDSPVFWYAPECLIQSK---FYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMT 231 (284)
T ss_pred cccccCccc--eeecCCCCCCccccCHHHhccCC---CCccccchhhhhhhhhhhcCCCCCccccchhhhhccccccccc
Confidence 876543221 11223345777899999886433 78899999999999999998876533211100 0
Q ss_pred HHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 628 LREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 628 l~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.............++....++..+.+||.+||..+|.+||++.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 232 VTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 000000011112234445789999999999999999999999999864
No 334
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.2e-36 Score=309.19 Aligned_cols=250 Identities=20% Similarity=0.300 Sum_probs=191.3
Q ss_pred EEecccCceEEEEEEEcc---CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEE
Q 005678 409 NLLGKGGFSEVYKAYDLV---EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~---~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~L 485 (683)
+.||+|+||.||+|.+.. ....||||.+.... .......+.+|+.+++.++||||+++++++...++..++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT------DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC------CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEE
Confidence 368999999999998653 34679999864321 112245778899999999999999999977555667889
Q ss_pred EEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCc
Q 005678 486 VLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDV 564 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~ 564 (683)
||||+.+++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||+|||++.++.+||+|||++..+....
T Consensus 75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 75 VLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 99999999999999653 45677888889999999999999855 9999999999999999999999999997654321
Q ss_pred CCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcC-CCCCCCCchHHHHHHHHHHHHhhccCCCC
Q 005678 565 GSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFG-RRPFGHDQTQERILREDTIIKARKVEFPS 643 (683)
Q Consensus 565 ~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG-~~PF~~~~~~e~il~~~~i~~~~~~~~p~ 643 (683)
.. .........+++.|+|||++.... ++.++|||||||++|+|++| .+||......+ +.. .+... ...+.
T Consensus 153 ~~-~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~-~~~--~~~~~--~~~~~ 223 (262)
T cd05058 153 YY-SVHNHTGAKLPVKWMALESLQTQK---FTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD-ITV--YLLQG--RRLLQ 223 (262)
T ss_pred ce-eecccccCcCCccccChhHhccCc---cchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHH--HHhcC--CCCCC
Confidence 10 111122335677899999886443 78999999999999999994 66676544332 111 11111 12222
Q ss_pred CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 644 RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 644 ~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
...++..+.++|.+||..+|++||++.+++..
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 34578999999999999999999999999863
No 335
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-37 Score=342.12 Aligned_cols=260 Identities=30% Similarity=0.439 Sum_probs=219.5
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
+.-...|.+...||+|.|++|.+|++..++..||||++..+.... .....+.+|+.+|+.|+|||||++|.+..
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-----~~~~k~~rev~imk~l~HPnIvkl~~v~~- 125 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-----SKRQKLGREVDIMKSLNHPNIVKLFSVIE- 125 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-----HHHHHHHHHHHHHHhcCCcceeeeeeeee-
Confidence 334457999999999999999999999999999999986654322 22455889999999999999999999886
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
....+|+||||+.+|.++++|.+++.+.+.+++.++.|+++|+.|||.+. |||||||+.||||+.+-++||+|||++.
T Consensus 126 t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~~mnikIaDfgfS~ 203 (596)
T KOG0586|consen 126 TEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDENMNIKIADFGFST 203 (596)
T ss_pred ecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcc--eeccccchhhcccccccceeeeccccce
Confidence 67789999999999999999999999999999999999999999999965 9999999999999999999999999999
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
.+... .+....+|++.|.|||+|.+.. ...+.+|+||+|+++|-|++|..||....-.+ +....+ ...
T Consensus 204 ~~~~~------~~lqt~cgsppyAaPEl~~g~~--y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--Lr~rvl--~gk 271 (596)
T KOG0586|consen 204 FFDYG------LMLQTFCGSPPYAAPELFNGKK--YDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--LRPRVL--RGK 271 (596)
T ss_pred eeccc------ccccccCCCCCccChHhhcCcc--cCCcceehhhhhhhheeeeecccccCCccccc--ccchhe--eee
Confidence 88643 2344568999999999997665 35789999999999999999999997654322 111111 122
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
+..| -.++.++.++|+++|-++|.+|+++.++..|.|+..
T Consensus 272 ~rIp--~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 272 YRIP--FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred eccc--ceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 2222 347889999999999999999999999999999753
No 336
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-37 Score=353.28 Aligned_cols=256 Identities=27% Similarity=0.434 Sum_probs=212.3
Q ss_pred ccccccceeEEEEecccCceEEEEEEEc-----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeee
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDL-----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRL 472 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~-----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L 472 (683)
..+-.....+.+.||+|.||+||+|... .....||||.++... ......+|.||+.++..|+|||||+|
T Consensus 481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a------~~~~~~dF~REaeLla~l~H~nIVrL 554 (774)
T KOG1026|consen 481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA------ENQARQDFRREAELLAELQHPNIVRL 554 (774)
T ss_pred eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc------cHHHHHHHHHHHHHHHhccCCCeEEE
Confidence 3455566777889999999999999642 234679999875432 22345789999999999999999999
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcC--------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCC
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKAT--------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKP 538 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~--------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP 538 (683)
+|+|. .++.+|+|+|||..|||..+|... ++|+..+...|+.|||.|+.||-++ .+|||||-.
T Consensus 555 lGVC~-~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~--~FVHRDLAT 631 (774)
T KOG1026|consen 555 LGVCR-EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH--HFVHRDLAT 631 (774)
T ss_pred EEEEc-cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--cccccchhh
Confidence 99996 788999999999999999999533 1278889999999999999999984 599999999
Q ss_pred cceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCC
Q 005678 539 GNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRP 617 (683)
Q Consensus 539 ~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~P 617 (683)
.|+|+.++..|||+||||++-+..... +.......--.+|||||.+..++ ||.++|||||||+|||+++ |..|
T Consensus 632 RNCLVge~l~VKIsDfGLsRdiYssDY---Yk~~~~t~lPIRWMppEsIly~k---FTteSDVWs~GVvLWEIFsyG~QP 705 (774)
T KOG1026|consen 632 RNCLVGENLVVKISDFGLSRDIYSSDY---YKVRGNTLLPIRWMPPESILYGK---FTTESDVWSFGVVLWEIFSYGKQP 705 (774)
T ss_pred hhceeccceEEEecccccchhhhhhhh---hcccCCceeeeecCCHHHhhcCc---ccchhhhhhhhhhhhhhhccccCc
Confidence 999999999999999999997764321 11111112346799999998777 9999999999999999996 9999
Q ss_pred CCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 618 FGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 618 F~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
|.....++.|.. +..+.+ ++.+..||.++.+|+..||..+|.+||++.+|-
T Consensus 706 y~glSn~EVIe~----i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 706 YYGLSNQEVIEC----IRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred ccccchHHHHHH----HHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 999888887743 455555 777789999999999999999999999999984
No 337
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.5e-36 Score=334.82 Aligned_cols=260 Identities=24% Similarity=0.345 Sum_probs=205.3
Q ss_pred cccccccceeEEEEecccCceEEEEEEEc-----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCcee
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDL-----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIV 470 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~-----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV 470 (683)
.|.+..++|.+.+.||+|+||.||+|.+. .++..||||++..... ......+.+|+.++..+. |||||
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~~E~~~l~~l~~H~niv 104 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR------SSEKQALMSELKIMSHLGPHLNIV 104 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC------hhHHHHHHHHHHHHHhcCCCCCeE
Confidence 56778889999999999999999999853 3567899999864322 112346789999999997 99999
Q ss_pred eeccccccCCceEEEEEecccCCChhHHHhcC------------------------------------------------
Q 005678 471 RLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT------------------------------------------------ 502 (683)
Q Consensus 471 ~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~------------------------------------------------ 502 (683)
+++++|. ..+.+++|||||++|+|.+++...
T Consensus 105 ~~~~~~~-~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T cd05107 105 NLLGACT-KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSK 183 (401)
T ss_pred EEEEEEc-cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCC
Confidence 9999986 566899999999999999998542
Q ss_pred --------------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhcCCceE
Q 005678 503 --------------------------------------------------PVLPEREARIIIVQIFQGLIYLNKRAQKII 532 (683)
Q Consensus 503 --------------------------------------------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~II 532 (683)
..+++..+..|+.||+.||.|||+.+ |+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iv 261 (401)
T cd05107 184 DESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN--CV 261 (401)
T ss_pred ccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cC
Confidence 13567778889999999999999854 99
Q ss_pred ecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH
Q 005678 533 HYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML 612 (683)
Q Consensus 533 HrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL 612 (683)
||||||.|||++.++.+||+|||+++........ .......|++.|+|||++.... ++.++|||||||++|+|+
T Consensus 262 Hrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvil~e~l 335 (401)
T cd05107 262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNY---ISKGSTFLPLKWMAPESIFNNL---YTTLSDVWSFGILLWEIF 335 (401)
T ss_pred cccCCcceEEEeCCCEEEEEecCcceeccccccc---ccCCCcCCCCceeChHHhcCCC---CCcHhHHHHHHHHHHHHH
Confidence 9999999999999999999999999865432111 1112235788999999886433 788999999999999999
Q ss_pred c-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 613 F-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 613 t-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
+ |..||......+.... .+.. ....+.+..++.++.+||.+||..+|.+||++.+|+..
T Consensus 336 ~~g~~P~~~~~~~~~~~~--~~~~--~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 336 TLGGTPYPELPMNEQFYN--AIKR--GYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HcCCCCCCCCCchHHHHH--HHHc--CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 8 8999976554433221 1111 22233445689999999999999999999999999864
No 338
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.4e-36 Score=311.02 Aligned_cols=249 Identities=18% Similarity=0.296 Sum_probs=189.3
Q ss_pred EecccCceEEEEEEEc--cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEE
Q 005678 410 LLGKGGFSEVYKAYDL--VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~--~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
.||+|+||.||+|... .....+++|.+..... ......+.+|+.+++.++||||+++++.|. ....+++||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-~~~~~~lv~ 74 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT------PDEQLLFLQEVQPYRELNHPNVLQCLGQCI-ESIPYLLVL 74 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCC------hHHHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCceEEEE
Confidence 5899999999999643 2456788887643321 122356788999999999999999999886 667899999
Q ss_pred ecccCCChhHHHhcCC-----CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 488 EYCSGKDLDAVLKATP-----VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~-----~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
||+++++|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||.|||++.++.+||+|||++.....
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTADLSVKIGDYGLALEQYP 152 (269)
T ss_pred EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecCCCcEEEecccccccccc
Confidence 9999999999996542 2467788899999999999999965 99999999999999999999999999865432
Q ss_pred CcCCCcccccccCCCCCccCCcccccccC----CCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhh
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSK----TPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~----~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
... ........+++.|+|||++.... ...++.++|||||||++|+|++ |..||......+.+. ......
T Consensus 153 ~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~---~~~~~~ 226 (269)
T cd05042 153 EDY---YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLK---QVVREQ 226 (269)
T ss_pred chh---eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH---HHhhcc
Confidence 210 01122335677899999975421 2346889999999999999998 788997665443221 112222
Q ss_pred ccCCCC---CcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 638 KVEFPS---RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 638 ~~~~p~---~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...++. ...++..+.+++..|| .+|++||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 227 DIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred CccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 222222 2367889999999999 59999999999875
No 339
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.6e-36 Score=314.61 Aligned_cols=268 Identities=17% Similarity=0.209 Sum_probs=193.5
Q ss_pred ccccceeEEEEecccCceEEEEEEEccC---CeEEEEEEeccCcccchhhH----HHHHHHHHHHHHHHhhcCCCceeee
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVE---HRYVACKLHGLNAQWSEDKK----QSYIRHAIREYNIHKTLVHHHIVRL 472 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~---g~~VAVKi~~~~~~~~~~~~----~~~i~~~~rEi~il~~L~HpnIV~L 472 (683)
+...+|.+.+.||+|+||.||+|.+..+ +..+|+|+............ .........++..+..+.|+||+.+
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 5668999999999999999999998777 67788887543322111000 0011223345556677899999999
Q ss_pred ccccccCCc---eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcE
Q 005678 473 WDTFEIDQN---TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVA 549 (683)
Q Consensus 473 ~~~f~~d~~---~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~v 549 (683)
++++..... ..+++++++ ..++.+.+......++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG--ISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCcE
Confidence 987643322 346788887 4577777766656788889999999999999999865 9999999999999999999
Q ss_pred EEEecCCccccccCcCCCc--ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH
Q 005678 550 KVTDFGLSKIVEDDVGSQG--MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI 627 (683)
Q Consensus 550 KL~DFGls~~~~~~~~~~~--~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i 627 (683)
+|+|||+|+.+........ ........||+.|+|||++.... ++.++|||||||++|+|++|..||.........
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~---~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGAC---VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCC---CCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 9999999987643211110 01122346999999999886443 899999999999999999999999766332222
Q ss_pred HH---HHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 628 LR---EDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 628 l~---~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.. .+.+........ ..+.++..+.+++..|+..+|++||++.++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 243 IHAAKCDFIKRLHEGKI-KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHhHHHHHHHhhhhhh-ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11 111111111111 12456889999999999999999999999875
No 340
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.1e-36 Score=313.64 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=199.5
Q ss_pred cccceeEEEEecccCceEEEEEEEcc-----CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLV-----EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDT 475 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~-----~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~ 475 (683)
..++|.+...||.|+||.||+|.+.. ++..||+|++..... ......+.+|+.+++.+.||||++++++
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~ei~~l~~l~h~~iv~~~~~ 76 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFDHPNIVKLLGV 76 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC------HHHHHHHHHHHHHHHhcCCCchheEEEE
Confidence 35678999999999999999998643 678999998754321 1223568889999999999999999998
Q ss_pred cccCCceEEEEEecccCCChhHHHhcC----------------------CCcchHHHHHHHHHHHHHHHHHHhcCCceEe
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLKAT----------------------PVLPEREARIIIVQIFQGLIYLNKRAQKIIH 533 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~~~----------------------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIH 533 (683)
+. +...+|+||||+++++|..++... ..+++..+..++.+++.||.|||..+ ++|
T Consensus 77 ~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H 153 (288)
T cd05050 77 CA-VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVH 153 (288)
T ss_pred Ec-CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eec
Confidence 86 567789999999999999999642 23678888999999999999999865 999
Q ss_pred cccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc
Q 005678 534 YDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF 613 (683)
Q Consensus 534 rDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt 613 (683)
+||||+|||++.++.++|+|||++..+...... .......+++.|+|||.+.... ++.++|||||||++|+|++
T Consensus 154 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~ 227 (288)
T cd05050 154 RDLATRNCLVGENMVVKIADFGLSRNIYSADYY---KASENDAIPIRWMPPESIFYNR---YTTESDVWAYGVVLWEIFS 227 (288)
T ss_pred ccccHhheEecCCCceEECccccceecccCccc---cccCCCccChhhcCHHHHhcCC---CCchhHHHHHHHHHHHHHh
Confidence 999999999999999999999998765432110 1111224566799999876443 8899999999999999997
Q ss_pred -CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 614 -GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 614 -G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
|..||......+... .+.... .++....++..+.+||.+||..+|.+||++.++++
T Consensus 228 ~~~~p~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 228 YGMQPYYGMAHEEVIY---YVRDGN--VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCCCCCCCCCHHHHHH---HHhcCC--CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 888986554433221 111111 12333468899999999999999999999999874
No 341
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.8e-36 Score=311.46 Aligned_cols=242 Identities=25% Similarity=0.368 Sum_probs=189.8
Q ss_pred EecccCceEEEEEEEccCCe--EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEEE
Q 005678 410 LLGKGGFSEVYKAYDLVEHR--YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCTV 486 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~--~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~LV 486 (683)
.||+|+||.||+|.+..++. .+++|.+.... .......+.+|+.++.++ .||||++++++|. ..+.+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv 74 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA------SKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLA 74 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC------CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-cCCCceEE
Confidence 58999999999999877775 46888764321 112245678899999999 7999999999986 56678999
Q ss_pred EecccCCChhHHHhcCC----------------CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEE
Q 005678 487 LEYCSGKDLDAVLKATP----------------VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 487 ~Ey~~ggsL~~~L~~~~----------------~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vK 550 (683)
|||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+|
T Consensus 75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcCCCeEE
Confidence 99999999999996432 4788999999999999999999865 99999999999999999999
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHH
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILR 629 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~ 629 (683)
|+|||++....... ......+++.|+|||++.... ++.++|||||||++|+|++ |..||......... .
T Consensus 153 l~dfgl~~~~~~~~------~~~~~~~~~~y~apE~~~~~~---~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~ 222 (270)
T cd05047 153 IADFGLSRGQEVYV------KKTMGRLPVRWMAIESLNYSV---YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-E 222 (270)
T ss_pred ECCCCCccccchhh------hccCCCCccccCChHHHccCC---CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH-H
Confidence 99999986332110 111123466799999885433 7899999999999999996 99999665443322 1
Q ss_pred HHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 630 EDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 630 ~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.+. .....+....++.++.+||.+||..+|.+||++.+++.
T Consensus 223 --~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 223 --KLP--QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred --HHh--CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 111 11222233457889999999999999999999999975
No 342
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.1e-36 Score=310.59 Aligned_cols=249 Identities=19% Similarity=0.282 Sum_probs=189.7
Q ss_pred EecccCceEEEEEEEc--cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEE
Q 005678 410 LLGKGGFSEVYKAYDL--VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~--~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
.||+|+||.||+|... .++..+|+|.+...... .....+.+|+.+++.++||||++++++|. +...+++||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~ 74 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV------QEQMKFLEEAQPYRSLQHSNLLQCLGQCT-EVTPYLLVM 74 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCCh------HHHHHHHHHHHHHHhCCCCCEeeEEEEEc-CCCCcEEEE
Confidence 5899999999999753 35567999987544211 12346888999999999999999999886 567789999
Q ss_pred ecccCCChhHHHhcC-----CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 488 EYCSGKDLDAVLKAT-----PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~-----~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||.|||++.++.+||+|||++.....
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 75 EFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTADLTVKIGDYGLSHNKYK 152 (269)
T ss_pred ECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEECCccccccccC
Confidence 999999999998542 24567778889999999999999865 99999999999999999999999999875433
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCC----CCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhh
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKT----PLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~----~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
.... .......|++.|+|||++..... ..++.++|||||||++|+|++ |..||......+.... .....
T Consensus 153 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~---~~~~~ 226 (269)
T cd05087 153 EDYY---VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY---TVREQ 226 (269)
T ss_pred ccee---ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH---Hhhcc
Confidence 2110 11122357888999998853321 135789999999999999996 9999976655443211 11222
Q ss_pred ccCCCCC---cCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 638 KVEFPSR---PAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 638 ~~~~p~~---~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...++.+ ..++..+.+++.+|+ .+|.+|||+.+|+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 227 QLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 2222221 256788999999999 68999999999974
No 343
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.3e-36 Score=309.88 Aligned_cols=252 Identities=22% Similarity=0.321 Sum_probs=201.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCe----EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHR----YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~----~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
..+|.+.+.||+|+||.||+|.+..+|. .||+|.+..... ......+.+|+.++..++||||+++++++.
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 79 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS------PKANKEILDEAYVMASVDHPHVVRLLGICL 79 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC------HHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 4678999999999999999998776654 689998754422 223467889999999999999999999886
Q ss_pred cCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
. ...++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||+
T Consensus 80 -~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kL~dfg~ 155 (279)
T cd05057 80 -S-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKTPQHVKITDFGL 155 (279)
T ss_pred -c-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcCCCeEEECCCcc
Confidence 3 7889999999999999999653 46899999999999999999999855 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
++........ .......+++.|+|||.+.... ++.++|||||||++|+|++ |..||......+.. . .+..
T Consensus 156 ~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~---~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~--~~~~ 226 (279)
T cd05057 156 AKLLDVDEKE---YHAEGGKVPIKWMALESILHRI---YTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIP-D--LLEK 226 (279)
T ss_pred cccccCcccc---eecCCCcccccccCHHHhhcCC---cCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHH-H--HHhC
Confidence 9876533211 1111223467899999875433 7889999999999999998 99999776543321 1 1111
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...++.++.++..+.+++.+||..+|..||++.+++.
T Consensus 227 --~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 227 --GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred --CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 2233444568899999999999999999999998764
No 344
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.5e-36 Score=304.21 Aligned_cols=244 Identities=27% Similarity=0.413 Sum_probs=194.1
Q ss_pred EecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEec
Q 005678 410 LLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEY 489 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey 489 (683)
.||.|+||.||+|.. .++..||+|++..... ......+.+|+.+++.++||||+++++++. +.+.+++||||
T Consensus 2 ~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~ 73 (250)
T cd05085 2 LLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLP------QELKIKFLSEARILKQYDHPNIVKLIGVCT-QRQPIYIVMEL 73 (250)
T ss_pred ccCCCCCceEEEEEe-cCCcEEEEEecCCcCC------HHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-cCCccEEEEEC
Confidence 689999999999985 4688999998754321 112346788999999999999999999886 66788999999
Q ss_pred ccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCc
Q 005678 490 CSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 490 ~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
+++++|..++.. ...+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.........
T Consensus 74 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-- 149 (250)
T cd05085 74 VPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-- 149 (250)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcCCCeEEECCCccceeccccccc--
Confidence 999999999864 346889999999999999999999865 999999999999999999999999998754332111
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAV 647 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~ 647 (683)
......+++.|+|||++.... ++.++|||||||++|+|++ |..||.......... .+.. .........+
T Consensus 150 --~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~---~~~~--~~~~~~~~~~ 219 (250)
T cd05085 150 --SSGLKQIPIKWTAPEALNYGR---YSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE---QVEK--GYRMSCPQKC 219 (250)
T ss_pred --cCCCCCCcccccCHHHhccCC---CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH---HHHc--CCCCCCCCCC
Confidence 111224467799999986443 7889999999999999998 999997665443221 1111 1222233568
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 648 SNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 648 s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
+..+.+||.+||..+|.+||++.++++.
T Consensus 220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 220 PDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 8999999999999999999999999764
No 345
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5e-36 Score=304.08 Aligned_cols=248 Identities=29% Similarity=0.421 Sum_probs=200.5
Q ss_pred eEEEEecccCceEEEEEEEccCC----eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCc
Q 005678 406 ALLNLLGKGGFSEVYKAYDLVEH----RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQN 481 (683)
Q Consensus 406 ~l~~~LGkGgfG~Vyka~d~~~g----~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~ 481 (683)
.+.+.||.|+||.||+|.+...+ ..||+|++...... .....+..|+.++..+.||||+++++++. +.+
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~ 74 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE------QQIEEFLREARIMRKLDHPNIVKLLGVCT-EEE 74 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh------HHHHHHHHHHHHHHhcCCCchheEEEEEc-CCC
Confidence 56788999999999999987766 89999998544221 13567889999999999999999999986 567
Q ss_pred eEEEEEecccCCChhHHHhcCCC--cchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPV--LPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~--Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
.++++|||+++++|.+++..... +++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++..
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~ 152 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRD 152 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEccCCeEEEcccCCcee
Confidence 89999999999999999976544 899999999999999999999865 99999999999999999999999999987
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
....... ......+++.|+|||.+.. ..++.++||||||+++|+|++ |..||......... . .+....
T Consensus 153 ~~~~~~~----~~~~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~-~--~~~~~~- 221 (258)
T smart00219 153 LYDDDYY----KKKGGKLPIRWMAPESLKD---GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVL-E--YLKKGY- 221 (258)
T ss_pred ccccccc----ccccCCCcccccChHHhcc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-H--HHhcCC-
Confidence 6543111 1112347889999998843 337899999999999999998 88998764443322 1 111111
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
..+....++.++.+++.+||..+|.+|||+.++++
T Consensus 222 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 222 -RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred -CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 22333458999999999999999999999999985
No 346
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.6e-36 Score=307.11 Aligned_cols=252 Identities=27% Similarity=0.408 Sum_probs=201.7
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
|++..++|.+.+.||+|+||.||++.+ ..+..||+|.+.... .....+.+|+.+++.+.|+||+++++++.
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~~~--------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 71 (260)
T cd05073 1 WEIPRESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGS--------MSVEAFLAEANVMKTLQHDKLVKLHAVVT 71 (260)
T ss_pred CcccccceeEEeEecCccceEEEEEEe-cCCccEEEEecCCCh--------hHHHHHHHHHHHHHhcCCCCcceEEEEEc
Confidence 467788999999999999999999974 456679999864321 12356788999999999999999999986
Q ss_pred cCCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
+ ..+++||||+++++|.+++.. ...+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||
T Consensus 72 -~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~ 147 (260)
T cd05073 72 -K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFG 147 (260)
T ss_pred -C-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCCc
Confidence 3 678999999999999999965 345788899999999999999999865 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
++........ .......++..|+|||.+... .++.++|||||||++|+|++ |..||.......... .+.
T Consensus 148 ~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~---~~~ 217 (260)
T cd05073 148 LARVIEDNEY----TAREGAKFPIKWTAPEAINFG---SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR---ALE 217 (260)
T ss_pred ceeeccCCCc----ccccCCcccccccCHhHhccC---CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH---HHh
Confidence 9976543211 112223466789999988643 37889999999999999998 999997655433221 111
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.....+.....+.++.+++.+||..+|.+||++.+++.
T Consensus 218 --~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 218 --RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred --CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 22233344578899999999999999999999988764
No 347
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=6.2e-36 Score=305.36 Aligned_cols=241 Identities=25% Similarity=0.396 Sum_probs=195.5
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|.+.+.||+|+||.||++. .++..||+|.+.... ....+.+|+.++..++||||+++++++.. +.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~---------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~ 72 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV---------TAQAFLEETAVMTKLHHKNLVRLLGVILH--NG 72 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc---------hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--CC
Confidence 568999999999999999994 578899999875421 12467889999999999999999999863 34
Q ss_pred EEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
+++||||+++++|..++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++...
T Consensus 73 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 73 LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCcEEECCCccceec
Confidence 78999999999999999654 35789999999999999999999855 999999999999999999999999998764
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
.... .....+..|+|||++... .++.++|||||||++|+|++ |+.||......+... .+.. ..
T Consensus 151 ~~~~--------~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~---~~~~--~~ 214 (254)
T cd05083 151 SMGV--------DNSKLPVKWTAPEALKHK---KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKE---CVEK--GY 214 (254)
T ss_pred cccC--------CCCCCCceecCHHHhccC---CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHH---HHhC--CC
Confidence 3221 111345679999988643 37899999999999999997 999997765543221 1111 22
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
..+....++..+.+||.+||..+|..||++.+++.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 215 RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 23334568899999999999999999999999875
No 348
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5e-36 Score=309.32 Aligned_cols=259 Identities=24% Similarity=0.367 Sum_probs=201.8
Q ss_pred cceeEEEEecccCceEEEEEEEc----cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDL----VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~----~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
..|.+.+.||+|+||.||+|... .++..||||++...... .....+.+|+.+++.+.||||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~------~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~ 77 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE------QHRSDFEREIEILRTLDHENIVKYKGVCEK 77 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch------HHHHHHHHHHHHHHhCCCCChheEEeeeec
Confidence 45778899999999999999754 34789999998654321 235678899999999999999999988753
Q ss_pred -CCceEEEEEecccCCChhHHHhcCC-CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 479 -DQNTFCTVLEYCSGKDLDAVLKATP-VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 479 -d~~~~~LV~Ey~~ggsL~~~L~~~~-~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
+...+++||||+++++|.+++.... .+++..+..++.+++.||.|||+.+ |+|+||||.|||++.++.++|+|||+
T Consensus 78 ~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~ 155 (284)
T cd05038 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVESEDLVKISDFGL 155 (284)
T ss_pred CCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEccccc
Confidence 2557899999999999999996543 6899999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH---------
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI--------- 627 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i--------- 627 (683)
+......... ........++..|+|||++... .++.++||||||+++|+|++|..||.........
T Consensus 156 ~~~~~~~~~~--~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd05038 156 AKVLPEDKDY--YYVKEPGESPIFWYAPECLRTS---KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQM 230 (284)
T ss_pred ccccccCCcc--eeccCCCCCcccccCcHHHccC---CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccc
Confidence 9877532211 1112223456679999988644 3788999999999999999999998654332200
Q ss_pred -HHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 628 -LREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 628 -l~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...-.........++....++.++.+|+.+||..+|.+||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 231 IVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred cHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00000011122334445578899999999999999999999999975
No 349
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.2e-36 Score=314.97 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=199.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCe----EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHR----YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~----~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
...|.+.+.||.|+||.||+|.+..++. .||+|++..... ......+.+|+.+++.+.||||++++++|.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~~~~l~h~niv~~~~~~~ 79 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG------PKANVEFMDEALIMASMDHPHLVRLLGVCL 79 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC------HHHHHHHHHHHHHHHhCCCCCcccEEEEEc
Confidence 3567889999999999999999877775 578887743321 112345788999999999999999999885
Q ss_pred cCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
....++|+||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||+
T Consensus 80 --~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~~~~~kL~Dfg~ 155 (303)
T cd05110 80 --SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGL 155 (303)
T ss_pred --CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecCCCceEEccccc
Confidence 33567999999999999999654 35899999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~ 635 (683)
++.+...... .......++..|+|||++.... ++.++|||||||++|+|++ |..||......... .+..
T Consensus 156 ~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~---~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~----~~~~ 225 (303)
T cd05110 156 ARLLEGDEKE---YNADGGKMPIKWMALECIHYRK---FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP----DLLE 225 (303)
T ss_pred cccccCcccc---cccCCCccccccCCHHHhccCC---CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHHH
Confidence 9876533211 1122235677899999886443 7899999999999999996 99999765433211 1111
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
....++..+.++..+.++|.+||..+|.+||++.+++..
T Consensus 226 -~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 226 -KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred -CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 223344456688999999999999999999999998753
No 350
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=8.1e-36 Score=348.57 Aligned_cols=150 Identities=27% Similarity=0.424 Sum_probs=133.5
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
++|.+++.||+|+||.||+|.+..+++.||||++...... .......+..|+.++..++||||+++++++. ..+.
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----NKNMVHQVQAERDALALSKSPFIVHLYYSLQ-SANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----CHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-ECCE
Confidence 5799999999999999999999999999999998543221 1233456888999999999999999998886 6778
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
+|+||||+.|++|..++...+.+++..++.|+.||+.||.|||..+ ||||||||.||||+.++.+||+|||+++.
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999999987778999999999999999999999865 99999999999999999999999999863
No 351
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=336.16 Aligned_cols=259 Identities=25% Similarity=0.434 Sum_probs=210.3
Q ss_pred ccccccccceeEEEEecccCceEEEEEEEccCC----eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceee
Q 005678 396 NNFQILNHRYALLNLLGKGGFSEVYKAYDLVEH----RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVR 471 (683)
Q Consensus 396 ~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g----~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~ 471 (683)
..|++..+...+.+.||+|+||+||+|.....+ ..||||....... .....+..++.|.++++.++|||||+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~----~~~~~~~e~m~EArvMr~l~H~NVVr 225 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE----LTKEQIKEFMKEARVMRQLNHPNVVR 225 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeeccccc----ccHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 457778888888899999999999999865542 2389998754221 22344789999999999999999999
Q ss_pred eccccccCCceEEEEEecccCCChhHHHhcCC-CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEE
Q 005678 472 LWDTFEIDQNTFCTVLEYCSGKDLDAVLKATP-VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 472 L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~-~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vK 550 (683)
+||++. ....++||||+|.||+|.++|+..+ .++..+...++.+.+.||.|||+.. +|||||-..|+|++.++.+|
T Consensus 226 ~yGVa~-~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 226 FYGVAV-LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred EEEEEc-CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecCCCeEE
Confidence 999885 7788999999999999999998776 5999999999999999999999854 99999999999999999999
Q ss_pred EEecCCccccccCcCCCcccccc-cCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHH
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTS-QGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERIL 628 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~-~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il 628 (683)
|+|||+++.-..- .... ...--..|+|||.+... .|+.++|||||||++||+++ |..||......+...
T Consensus 303 ISDFGLs~~~~~~------~~~~~~~klPirWLAPEtl~~~---~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~ 373 (474)
T KOG0194|consen 303 ISDFGLSRAGSQY------VMKKFLKKLPIRWLAPETLNTG---IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA 373 (474)
T ss_pred eCccccccCCcce------eeccccccCcceecChhhhccC---ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH
Confidence 9999998754311 0111 01223569999998755 59999999999999999998 888998887764321
Q ss_pred HHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 629 REDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 629 ~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.+....+..+.+...+..+..++.+||..+|++||++.++.+
T Consensus 374 ----kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 374 ----KIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ----HHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 122233444555678899999999999999999999988864
No 352
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.2e-35 Score=305.34 Aligned_cols=256 Identities=29% Similarity=0.436 Sum_probs=201.3
Q ss_pred eeEEEEecccCceEEEEEEEcc-CCeEEEEEEeccCcccch---hhHHHHHHHHHHHHHHHhh-cCCCceeeeccccccC
Q 005678 405 YALLNLLGKGGFSEVYKAYDLV-EHRYVACKLHGLNAQWSE---DKKQSYIRHAIREYNIHKT-LVHHHIVRLWDTFEID 479 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~-~g~~VAVKi~~~~~~~~~---~~~~~~i~~~~rEi~il~~-L~HpnIV~L~~~f~~d 479 (683)
|.+.+.||+|+||.||+|.+.. ++..||+|.+........ ......+..+..|+.++.. ++||||++++++|. +
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-~ 80 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL-E 80 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-c
Confidence 7788899999999999999877 688999998754322110 1223345667889988875 79999999999986 6
Q ss_pred CceEEEEEecccCCChhHHHh----cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 480 QNTFCTVLEYCSGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
.+.+++||||+++++|.+++. ....+++..++.++.|++.||.|||+. .+|+|+||+|.|||++.++.++|+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE-KRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC-CceeecCCCHHHEEECCCCcEEEeccc
Confidence 778999999999999998873 345689999999999999999999963 249999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~ 635 (683)
++....... ......|+..|+|||++.... ++.++||||||+++|+|++|..||.......... .+..
T Consensus 160 ~~~~~~~~~------~~~~~~~~~~~~~Pe~~~~~~---~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~---~~~~ 227 (269)
T cd08528 160 LAKQKQPES------KLTSVVGTILYSCPEIVKNEP---YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLAT---KIVE 227 (269)
T ss_pred ceeeccccc------ccccccCcccCcChhhhcCCC---CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHH---HHhh
Confidence 998754332 123346899999999986433 7899999999999999999999997655433221 1111
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
..........++..+.+||.+||..||.+||++.++..+
T Consensus 228 -~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 228 -AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred -ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 111111122578999999999999999999999998754
No 353
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.8e-36 Score=304.86 Aligned_cols=229 Identities=22% Similarity=0.293 Sum_probs=186.9
Q ss_pred cCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecccCC
Q 005678 414 GGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGK 493 (683)
Q Consensus 414 GgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~~gg 493 (683)
|.||.||++.+..++..||+|.+.... ...+|...+....||||+++++++. +.+.+++||||++|+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------------~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~ 70 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------------EYSRERLTIIPHCVPNMVCLHKYIV-SEDSVFLVLQHAEGG 70 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------------hhhhHHHHHHhcCCCceeehhhhee-cCCeEEEEEecCCCC
Confidence 889999999999999999999875432 1223444455567999999999986 678899999999999
Q ss_pred ChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccc
Q 005678 494 DLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTS 573 (683)
Q Consensus 494 sL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~ 573 (683)
+|.+++.....+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++..+.... .
T Consensus 71 ~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~--------~ 140 (237)
T cd05576 71 KLWSHISKFLNIPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC--------D 140 (237)
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEEEecccchhcccccc--------c
Confidence 99999987777999999999999999999999865 9999999999999999999999999886554321 1
Q ss_pred cCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHH
Q 005678 574 QGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKD 653 (683)
Q Consensus 574 ~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~d 653 (683)
...++..|+|||.+.... ++.++||||+||++|+|++|..||...... +.......+ ++.++..+.+
T Consensus 141 ~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~g~~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~~ 207 (237)
T cd05576 141 GEAVENMYCAPEVGGISE---ETEACDWWSLGAILFELLTGKTLVECHPSG--------INTHTTLNI--PEWVSEEARS 207 (237)
T ss_pred cCCcCccccCCcccCCCC---CCchhhHHHHHHHHHHHHHCcchhhcCchh--------cccccccCC--cccCCHHHHH
Confidence 225677899999875433 788999999999999999999988543221 001111222 3468899999
Q ss_pred HHHHhcccCCCCCCCH-----HHHhcCccc
Q 005678 654 LIRRCLTYNQAERPDV-----LTLAQDPYL 678 (683)
Q Consensus 654 LI~rCL~~dP~kRPS~-----~eLl~hP~l 678 (683)
||.+||..||.+||++ .++++||||
T Consensus 208 li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 208 LLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 9999999999999985 999999997
No 354
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-37 Score=323.05 Aligned_cols=260 Identities=27% Similarity=0.391 Sum_probs=218.6
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
-...|.++.+||+|+||.|.+|..+.+...||||+++.+....+... .--+.|-.+|.-. +-|.+++|+.+|+ .
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDv----ectm~EKrvLAL~~kppFL~qlHScFQ-T 421 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDV----ECTMVEKRVLALPGKPPFLVQLHSCFQ-T 421 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcc----cceehhhhheecCCCCchHHHHHHHhh-h
Confidence 34568899999999999999999888999999999988766544332 2223455566554 5679999999997 6
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
-+.+|+||||+.||+|...+...+.+.+..+..++.+|+-||-|||+.| ||+||||.+||||+..|++||+|||+|+-
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCC--eeeeeccccceEeccCCceEeeecccccc
Confidence 7889999999999999999999999999999999999999999999977 99999999999999999999999999974
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
--.+. ..+.+.+|||.|+|||++.+.. |+..+|+||+||+|||||.|++||...+..+.+.. +....+
T Consensus 500 ni~~~-----~TTkTFCGTPdYiAPEIi~YqP---YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~a----I~ehnv 567 (683)
T KOG0696|consen 500 NIFDG-----VTTKTFCGTPDYIAPEIIAYQP---YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQA----IMEHNV 567 (683)
T ss_pred cccCC-----cceeeecCCCcccccceEEecc---cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HHHccC
Confidence 32221 2356679999999999998666 89999999999999999999999988777654422 345556
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTYS 681 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~~ 681 (683)
.+| ..+|.++.+++...|..+|.+|.- -.++-.||||+..
T Consensus 568 syP--KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 568 SYP--KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred cCc--ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 666 479999999999999999999974 4678899999865
No 355
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.9e-35 Score=301.29 Aligned_cols=249 Identities=28% Similarity=0.444 Sum_probs=198.0
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|.+.+.||.|+||.||+|.+. .+..+|+|++...... ...+.+|+.+++.+.||||+++++++. ....
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~ 73 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS--------EEDFIEEAQVMMKLSHPKLVQLYGVCT-ERSP 73 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC--------HHHHHHHHHHHHhCCCCCeeeEEEEEc-cCCc
Confidence 46888999999999999999864 4678999987543221 135678999999999999999999986 5678
Q ss_pred EEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+||||+++++|.+++... +.+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++....
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 74 ICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGENQVVKVSDFGMTRFVL 151 (256)
T ss_pred eEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcCCCeEEECCCcceeecc
Confidence 89999999999999999653 46899999999999999999999865 9999999999999999999999999987654
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
..... ......++..|+|||++.... ++.++|||||||++|+|++ |..||......... . .+... ..
T Consensus 152 ~~~~~----~~~~~~~~~~~~aPe~~~~~~---~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~--~~~~~--~~ 219 (256)
T cd05112 152 DDQYT----SSTGTKFPVKWSSPEVFSFSK---YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVV-E--TINAG--FR 219 (256)
T ss_pred cCccc----ccCCCccchhhcCHhHhccCC---cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH-H--HHhCC--CC
Confidence 32111 111223567899999886443 7889999999999999998 99999765543322 1 11111 12
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
...+...+..+.+|+.+||..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 220 LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 22234578999999999999999999999999863
No 356
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=9e-36 Score=307.36 Aligned_cols=239 Identities=21% Similarity=0.312 Sum_probs=186.1
Q ss_pred EEecccCceEEEEEEEcc------------CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 409 NLLGKGGFSEVYKAYDLV------------EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~------------~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
+.||+|+||.||+|.... ....|++|++.... ......+..|+.++..++||||+++++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-------~~~~~~~~~~~~~l~~l~hp~iv~~~~~~ 73 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-------RDISLAFFETASMMRQVSHKHIVLLYGVC 73 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-------hhHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 368999999999997422 23368899864321 12345678889999999999999999988
Q ss_pred ccCCceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCc-------
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGV------- 548 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~------- 548 (683)
. +....++||||+++++|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||.|||++.++.
T Consensus 74 ~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 74 V-RDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred e-cCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEecCCccCCCCce
Confidence 6 56678899999999999999864 456899999999999999999999865 999999999999986654
Q ss_pred EEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH-cCCCCCCCCchHHHH
Q 005678 549 AKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML-FGRRPFGHDQTQERI 627 (683)
Q Consensus 549 vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL-tG~~PF~~~~~~e~i 627 (683)
++++|||++...... ....|+..|+|||++... ..++.++|||||||++|+|+ +|..||......+..
T Consensus 151 ~~l~d~g~~~~~~~~---------~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~ 219 (262)
T cd05077 151 IKLSDPGIPITVLSR---------QECVERIPWIAPECVEDS--KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE 219 (262)
T ss_pred eEeCCCCCCccccCc---------ccccccccccChhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH
Confidence 899999998755321 123678889999987532 23788999999999999998 588888654432211
Q ss_pred HHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 628 LREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 628 l~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
... . ..+......+.++.+||.+||..||.+||++.+|+++
T Consensus 220 ----~~~-~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 220 ----RFY-E--GQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ----HHH-h--cCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 111 1 1122223456789999999999999999999999875
No 357
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.4e-36 Score=309.85 Aligned_cols=238 Identities=21% Similarity=0.337 Sum_probs=185.9
Q ss_pred EecccCceEEEEEEEcc------------------------CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC
Q 005678 410 LLGKGGFSEVYKAYDLV------------------------EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV 465 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~------------------------~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~ 465 (683)
.||+|+||.||+|.... ....|++|++... .......+.+|+.+++.++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-------~~~~~~~~~~~~~~~~~l~ 74 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-------HRDIALAFFETASLMSQVS 74 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-------HHHHHHHHHHHHHHHhcCC
Confidence 59999999999997432 1245889987432 1223456788999999999
Q ss_pred CCceeeeccccccCCceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC
Q 005678 466 HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD 544 (683)
Q Consensus 466 HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd 544 (683)
||||+++++++. +....++||||+++++|..++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++
T Consensus 75 h~niv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~ 151 (274)
T cd05076 75 HIHLAFVHGVCV-RGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLA 151 (274)
T ss_pred CCCeeeEEEEEE-eCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEe
Confidence 999999999885 66788999999999999999964 467899999999999999999999865 99999999999997
Q ss_pred CCC-------cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH-cCCC
Q 005678 545 EFG-------VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML-FGRR 616 (683)
Q Consensus 545 ~~g-------~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL-tG~~ 616 (683)
..+ .+||+|||++...... ....+++.|+|||++... ..++.++|||||||++|+|+ +|..
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~---------~~~~~~~~~~aPe~~~~~--~~~~~~~Dv~slG~~l~el~~~g~~ 220 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSR---------EERVERIPWIAPECVPGG--NSLSTAADKWSFGTTLLEICFDGEV 220 (274)
T ss_pred ccCcccCccceeeecCCccccccccc---------cccccCCcccCchhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 543 4899999987643221 123578889999988543 33789999999999999995 6999
Q ss_pred CCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 617 PFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 617 PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
||......+... .. .....+| ...+..+.+||.+||..+|.+|||+.+++++
T Consensus 221 p~~~~~~~~~~~----~~-~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 221 PLKERTPSEKER----FY-EKKHRLP--EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred CccccChHHHHH----HH-HhccCCC--CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 997654433211 11 1112222 2356789999999999999999999999875
No 358
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.1e-36 Score=306.66 Aligned_cols=245 Identities=25% Similarity=0.405 Sum_probs=192.8
Q ss_pred EecccCceEEEEEEEccCC------eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 410 LLGKGGFSEVYKAYDLVEH------RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g------~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.||.|+||.||+|.+.... ..||||.+..... ......+.+|+.+++.++||||++++++|. +...+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~ 74 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT------DQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-LNEPQ 74 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc------hhhHHHHHHHHHHHHhcCCCCeeeEeeeec-CCCCe
Confidence 5899999999999875443 7899998643211 122456788999999999999999999886 66789
Q ss_pred EEEEecccCCChhHHHhc-------CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-----cEEE
Q 005678 484 CTVLEYCSGKDLDAVLKA-------TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG-----VAKV 551 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~-------~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g-----~vKL 551 (683)
++||||+++++|.+++.. ...+++..+..++.+|+.||.|||+.+ ++|+||||+|||++.++ .++|
T Consensus 75 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 75 YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEecCCCCCCcceEE
Confidence 999999999999999953 234788999999999999999999865 99999999999999877 8999
Q ss_pred EecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHH
Q 005678 552 TDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILRE 630 (683)
Q Consensus 552 ~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~ 630 (683)
+|||++..+...... .......++..|+|||++.... ++.++|||||||++|+|++ |..||......+....
T Consensus 153 ~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~- 225 (269)
T cd05044 153 GDFGLARDIYKSDYY---RKEGEGLLPVRWMAPESLLDGK---FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH- 225 (269)
T ss_pred CCccccccccccccc---ccCcccCCCccccCHHHHccCC---cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHH-
Confidence 999999765432110 1112235678899999886443 7899999999999999997 9999976554432211
Q ss_pred HHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 631 DTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 631 ~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
+.. ...+.....++..+.+||.+||..+|.+||++.++++
T Consensus 226 --~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 226 --VTA--GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred --Hhc--CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 111 1222334568899999999999999999999999875
No 359
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4e-36 Score=308.20 Aligned_cols=238 Identities=23% Similarity=0.352 Sum_probs=187.0
Q ss_pred EecccCceEEEEEEEccCCeE-------EEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 410 LLGKGGFSEVYKAYDLVEHRY-------VACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~~-------VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
.||.|+||.||+|.+...+.. ||+|.+... .......+..|+.+++.+.||||+++++++. .+..
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-------~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-~~~~ 73 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-------HRNYSESFFEAASMMSQLSHKHLVLNYGVCV-CGDE 73 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch-------hHHHHHHHHHHHHHHHhCCCCChhheeeEEE-eCCC
Confidence 589999999999987655443 888876322 1233457788999999999999999999986 5567
Q ss_pred EEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCc--------EEEEe
Q 005678 483 FCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGV--------AKVTD 553 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~--------vKL~D 553 (683)
.++||||+++|+|..++... ..+++..+..++.||+.||.|||+.+ |+||||||.|||++.++. ++++|
T Consensus 74 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 74 SIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred cEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEecccccccCCCceEEecc
Confidence 88999999999999999654 45899999999999999999999865 999999999999987664 69999
Q ss_pred cCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCC-CCCCCCchHHHHHHHHH
Q 005678 554 FGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGR-RPFGHDQTQERILREDT 632 (683)
Q Consensus 554 FGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~-~PF~~~~~~e~il~~~~ 632 (683)
||++..... .....|++.|+|||++.... .++.++|||||||++|+|++|. .||..........
T Consensus 152 ~g~~~~~~~---------~~~~~~~~~y~aPE~~~~~~--~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~---- 216 (258)
T cd05078 152 PGISITVLP---------KEILLERIPWVPPECIENPQ--NLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ---- 216 (258)
T ss_pred cccccccCC---------chhccccCCccCchhccCCC--CCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH----
Confidence 998865432 12236888999999986422 3688999999999999999984 6665544332111
Q ss_pred HHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 633 IIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 633 i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.......+| ...+.++.+||.+||..+|.+|||+.++++.
T Consensus 217 -~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 217 -FYEDRHQLP--APKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -HHHccccCC--CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 111222233 3467889999999999999999999999864
No 360
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=353.16 Aligned_cols=254 Identities=26% Similarity=0.429 Sum_probs=207.3
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCe-----EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHR-----YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWD 474 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~-----~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~ 474 (683)
+......+...||+|.||+||.|....... .||||.+.... ....+..|++|..+|+.++|||||+++|
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~------~~~~~~~Fl~Ea~~m~~f~HpNiv~liG 762 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS------SEQEVSDFLKEALLMSKFDHPNIVSLIG 762 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC------CHHHHHHHHHHHHHHhcCCCcceeeEEE
Confidence 345677888999999999999997654322 38888775432 2344678999999999999999999999
Q ss_pred ccccCCceEEEEEecccCCChhHHHhcC-------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC
Q 005678 475 TFEIDQNTFCTVLEYCSGKDLDAVLKAT-------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 475 ~f~~d~~~~~LV~Ey~~ggsL~~~L~~~-------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g 547 (683)
++- +....+|++|||.||+|..+|++. ..|+......++.+||+|+.||++. ++|||||...|+||+...
T Consensus 763 v~l-~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~--~fvHRDLAaRNCLL~~~r 839 (1025)
T KOG1095|consen 763 VCL-DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK--HFVHRDLAARNCLLDERR 839 (1025)
T ss_pred eec-CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC--CCcCcchhhhheeecccC
Confidence 986 688899999999999999999654 4689999999999999999999985 599999999999999999
Q ss_pred cEEEEecCCccccccC-cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHH
Q 005678 548 VAKVTDFGLSKIVEDD-VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQE 625 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~-~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e 625 (683)
.+||+|||||+.+... .... .....--..|||||.|.. ..++.++|||||||++||+++ |..||+...+.+
T Consensus 840 ~VKIaDFGlArDiy~~~yyr~----~~~a~lPvkWm~PEsl~d---~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~ 912 (1025)
T KOG1095|consen 840 VVKIADFGLARDIYDKDYYRK----HGEAMLPVKWMPPESLKD---GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE 912 (1025)
T ss_pred cEEEcccchhHhhhhchheec----cCccccceecCCHHHHhh---cccccccchhhhHHHHHHHHhCCCCCCCCcchHH
Confidence 9999999999944332 1111 001111246999999975 449999999999999999998 999999888766
Q ss_pred HHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 626 RILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 626 ~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
.+.. ..... .++.++.|+..+.+++..||..+|++||++..|++
T Consensus 913 v~~~---~~~gg--RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 913 VLLD---VLEGG--RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHH---HHhCC--ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 5431 12222 66777889999999999999999999999999985
No 361
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.3e-35 Score=299.80 Aligned_cols=245 Identities=25% Similarity=0.367 Sum_probs=195.1
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEe
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
+.||.|+||.||+|.+.. +..||+|++...... .....+..|+.+++.+.||||+++++++. +...+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e 72 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP------DLKRKFLQEAEILKQYDHPNIVKLIGVCV-QKQPIYIVME 72 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH------HHHHHHHHHHHHHHhCCCCCeEEEEEEEe-cCCCeEEEEE
Confidence 368999999999999877 999999987554321 23457889999999999999999999886 6778999999
Q ss_pred cccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCC
Q 005678 489 YCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQ 567 (683)
Q Consensus 489 y~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~ 567 (683)
|+++++|.+++.. ...+++..+..++.+++.||.|||+.+ |+|+||+|+|||++.++.++|+|||++.........
T Consensus 73 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~- 149 (251)
T cd05041 73 LVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT- 149 (251)
T ss_pred cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcCCCcEEEeeccccccccCCcce-
Confidence 9999999999954 456889999999999999999999855 999999999999999999999999999765422110
Q ss_pred cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcC
Q 005678 568 GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPA 646 (683)
Q Consensus 568 ~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~ 646 (683)
.......++..|+|||.+... .++.++|||||||++|+|++ |..||.......... .+. .....+.+..
T Consensus 150 --~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~---~~~--~~~~~~~~~~ 219 (251)
T cd05041 150 --VSDGLKQIPIKWTAPEALNYG---RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE---RIE--SGYRMPAPQL 219 (251)
T ss_pred --eccccCcceeccCChHhhccC---CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH---HHh--cCCCCCCCcc
Confidence 001112345679999988643 37899999999999999998 889997655432111 111 1123333456
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 647 VSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 647 ~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
++..+.+||.+||..+|.+||++.++++
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 8899999999999999999999999985
No 362
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.3e-35 Score=302.11 Aligned_cols=238 Identities=22% Similarity=0.359 Sum_probs=188.7
Q ss_pred EEecccCceEEEEEEEccCC----------eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 409 NLLGKGGFSEVYKAYDLVEH----------RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g----------~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
+.||+|+||.||+|.+..++ ..|++|++..... ....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR--------DSLAFFETASLMSQLSHKHLVKLYGVCVR 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh--------hHHHHHHHHHHHHcCCCcchhheeeEEec
Confidence 36899999999999987776 3588887643211 14578889999999999999999998864
Q ss_pred CCceEEEEEecccCCChhHHHhcCC-CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-------cEE
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATP-VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG-------VAK 550 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~-~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g-------~vK 550 (683)
...++||||+++++|.+++...+ .+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++ .+|
T Consensus 73 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 73 --DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK--LVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred --CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eecccCccceEEEecCccccCCceeEE
Confidence 66789999999999999997655 7899999999999999999999855 99999999999999877 799
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHH
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILR 629 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~ 629 (683)
|+|||++...... ....++..|+|||++.... ..++.++|||||||++|+|++ |..||..........
T Consensus 149 l~Dfg~a~~~~~~---------~~~~~~~~y~aPE~~~~~~-~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~- 217 (259)
T cd05037 149 LSDPGIPITVLSR---------EERVERIPWIAPECIRNGQ-ASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER- 217 (259)
T ss_pred eCCCCcccccccc---------cccccCCCccChhhhcCCC-CCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-
Confidence 9999999865431 1235677899999986542 347899999999999999999 688886654322111
Q ss_pred HHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 630 EDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 630 ~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
... .....+ ......+.+||.+||..+|.+||++.++++.
T Consensus 218 --~~~--~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 257 (259)
T cd05037 218 --FYQ--DQHRLP--MPDCAELANLINQCWTYDPTKRPSFRAILRD 257 (259)
T ss_pred --HHh--cCCCCC--CCCchHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 111 111112 1233789999999999999999999999863
No 363
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-36 Score=351.71 Aligned_cols=260 Identities=30% Similarity=0.503 Sum_probs=203.0
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc----
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI---- 478 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~---- 478 (683)
..|+.+.+||+||||.||+++++-+|++||||.+.... .......+.+|+..+.+|+|||||++|..|..
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~------s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA------SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch------HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 35677889999999999999999999999999987653 22335678999999999999999998855510
Q ss_pred -------------------------------------------------------------------------CC-----
Q 005678 479 -------------------------------------------------------------------------DQ----- 480 (683)
Q Consensus 479 -------------------------------------------------------------------------d~----- 480 (683)
++
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence 00
Q ss_pred ------------------------------------ceEEEEEecccCCChhHHHhcCCCc-chHHHHHHHHHHHHHHHH
Q 005678 481 ------------------------------------NTFCTVLEYCSGKDLDAVLKATPVL-PEREARIIIVQIFQGLIY 523 (683)
Q Consensus 481 ------------------------------------~~~~LV~Ey~~ggsL~~~L~~~~~L-se~~~~~I~~qIa~aL~y 523 (683)
..+||-||||+..+|.+++..+... ....++.++++|+.||.|
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 2478899999998888888777644 467789999999999999
Q ss_pred HHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc---cC----c------CCCcccccccCCCCCccCCccccccc
Q 005678 524 LNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE---DD----V------GSQGMELTSQGAGTYWYLPPECFELS 590 (683)
Q Consensus 524 LH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~---~~----~------~~~~~~l~~~~~GT~~Y~APE~~~~~ 590 (683)
+|+.| ||||||||.||||++++.|||+|||+++... .. . ......-....+||..|+|||.+...
T Consensus 713 IH~~g--iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 713 IHDQG--IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HHhCc--eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 99976 9999999999999999999999999998722 00 0 00111112345899999999999766
Q ss_pred CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCC-----cCCCHHHHHHHHHhcccCCCC
Q 005678 591 KTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSR-----PAVSNEAKDLIRRCLTYNQAE 665 (683)
Q Consensus 591 ~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~-----~~~s~el~dLI~rCL~~dP~k 665 (683)
....|+.|+|+||||||||||++ ||+... +++.. +...+...+|.+ +..+ .-..+|+.||..||.+
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--ERa~i---L~~LR~g~iP~~~~f~~~~~~-~e~slI~~Ll~hdP~k 861 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--ERASI---LTNLRKGSIPEPADFFDPEHP-EEASLIRWLLSHDPSK 861 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchH--HHHHH---HHhcccCCCCCCcccccccch-HHHHHHHHHhcCCCcc
Confidence 55569999999999999999995 776544 33322 223334444433 2233 4568999999999999
Q ss_pred CCCHHHHhcCcccC
Q 005678 666 RPDVLTLAQDPYLT 679 (683)
Q Consensus 666 RPS~~eLl~hP~l~ 679 (683)
|||+.+||++.||.
T Consensus 862 RPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 862 RPTATELLNSELLP 875 (1351)
T ss_pred CCCHHHHhhccCCC
Confidence 99999999999986
No 364
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-37 Score=330.17 Aligned_cols=249 Identities=31% Similarity=0.463 Sum_probs=209.2
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEe
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
+.||.|.||+||-|..+.+|+.||||++.+-.-.... ...+..|+.||..+.||.||.|-..|+ ..+..++|||
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-----esqlR~EVaILq~l~HPGiV~le~M~E-T~ervFVVME 643 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-----ESQLRNEVAILQNLHHPGIVNLECMFE-TPERVFVVME 643 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCch-----HHHHHHHHHHHHhcCCCCeeEEEEeec-CCceEEEEeh
Confidence 6899999999999999999999999998654332221 246788999999999999999998886 6778889999
Q ss_pred cccCCChhHHH-hcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC---CCcEEEEecCCccccccCc
Q 005678 489 YCSGKDLDAVL-KATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE---FGVAKVTDFGLSKIVEDDV 564 (683)
Q Consensus 489 y~~ggsL~~~L-~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~---~g~vKL~DFGls~~~~~~~ 564 (683)
-+.|.-|.-+| .+.+.|+++....++.||+.||.|||-. +|+|+||||+||||.+ .-.+||||||+++++....
T Consensus 644 Kl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k--nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 644 KLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK--NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred hhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc--ceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 99554444444 4557899999999999999999999985 5999999999999974 4479999999999997653
Q ss_pred CCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC-
Q 005678 565 GSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS- 643 (683)
Q Consensus 565 ~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~- 643 (683)
+....+|||.|+|||++...+ |...-|+||+|||+|--|.|..||....+.. ..+++..+-+|.
T Consensus 722 ------FRrsVVGTPAYLaPEVLrnkG---yNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn------dQIQNAaFMyPp~ 786 (888)
T KOG4236|consen 722 ------FRRSVVGTPAYLAPEVLRNKG---YNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN------DQIQNAAFMYPPN 786 (888)
T ss_pred ------hhhhhcCCccccCHHHHhhcc---ccccccceeeeEEEEEEecccccCCCccchh------HHhhccccccCCC
Confidence 344559999999999998665 8889999999999999999999997665432 224445555664
Q ss_pred -CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 644 -RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 644 -~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
|..++.++.+||..+|...-.+|.++...+.|||++.
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 4589999999999999999999999999999999985
No 365
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.2e-35 Score=302.50 Aligned_cols=253 Identities=24% Similarity=0.348 Sum_probs=195.8
Q ss_pred eeEEEEecccCceEEEEEEEcc---CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC-
Q 005678 405 YALLNLLGKGGFSEVYKAYDLV---EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ- 480 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~---~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~- 480 (683)
|.+.+.||+|+||.||+|.+.. ++..||||++....... .....+.+|+.+++.+.||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 75 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-----SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRA 75 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-----HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCC
Confidence 5677899999999999998543 57899999886543221 22456888999999999999999999875322
Q ss_pred ----ceEEEEEecccCCChhHHHhcC------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEE
Q 005678 481 ----NTFCTVLEYCSGKDLDAVLKAT------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 481 ----~~~~LV~Ey~~ggsL~~~L~~~------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vK 550 (683)
...+++++|+.+++|..++... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+|
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~~~~~k 153 (273)
T cd05074 76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNENMTVC 153 (273)
T ss_pred CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcCCCCEE
Confidence 1347889999999999887321 24788999999999999999999865 99999999999999999999
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHH
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILR 629 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~ 629 (683)
|+|||+++....... ........+++.|++||.+.... ++.++|||||||++|+|++ |.+||......+ +..
T Consensus 154 l~dfg~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~---~~~~sDi~slG~il~el~~~g~~p~~~~~~~~-~~~ 226 (273)
T cd05074 154 VADFGLSKKIYSGDY---YRQGCASKLPVKWLALESLADNV---YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE-IYN 226 (273)
T ss_pred ECcccccccccCCcc---eecCCCccCchhhcCHhHHhcCc---cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH-HHH
Confidence 999999986643211 11122334567899999876443 7889999999999999999 899997655432 211
Q ss_pred HHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 630 EDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 630 ~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.+.... .....+.++..+.+++.+||..+|.+||++.+++..
T Consensus 227 --~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 227 --YLIKGN--RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred --HHHcCC--cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 112222 222335688999999999999999999999999753
No 366
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.9e-35 Score=302.21 Aligned_cols=249 Identities=18% Similarity=0.260 Sum_probs=186.9
Q ss_pred EecccCceEEEEEEEccC--CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEE
Q 005678 410 LLGKGGFSEVYKAYDLVE--HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~--g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
.||+|+||.||+|..... ...+++|.+..... ......+.+|+.++..++||||+++++.|. +...+|+||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-~~~~~~lv~ 74 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS------SKEQNEFLQQGDPYRILQHPNILQCLGQCV-EAIPYLLVF 74 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC------hHHHHHHHHHHHHHhccCCcchhheEEEec-CCCccEEEE
Confidence 589999999999964333 34566776544321 122457889999999999999999999986 677889999
Q ss_pred ecccCCChhHHHhcC----CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 488 EYCSGKDLDAVLKAT----PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~----~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||++......
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~ 152 (268)
T cd05086 75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE 152 (268)
T ss_pred ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcCCccEEecccccccccCcc
Confidence 999999999999643 34667778899999999999999865 999999999999999999999999998643221
Q ss_pred cCCCcccccccCCCCCccCCcccccccC----CCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSK----TPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~----~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
. .........|++.|+|||++.... ...++.++|||||||++|+|++ |..||......+.+.. +.....
T Consensus 153 ~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~---~~~~~~ 226 (268)
T cd05086 153 D---YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNH---VIKDQQ 226 (268)
T ss_pred h---hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---HHhhcc
Confidence 1 011122346889999999875321 1235789999999999999996 5778866554432221 122222
Q ss_pred cCCC---CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 639 VEFP---SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 639 ~~~p---~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...+ ....+++.+.+++..|| .+|.+||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 227 VKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred cccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 2211 12357889999999999 68999999999975
No 367
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.6e-36 Score=307.24 Aligned_cols=264 Identities=25% Similarity=0.429 Sum_probs=202.5
Q ss_pred ceeEEEEecccCceEEEEEEEccCC----eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEH----RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g----~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
.|.++..||+|.||.||+|.-..++ ..+|||.+.-..... ..-..++||+..++.++||||+.|..+|-..
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-----GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~ 99 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-----GISMSACREIALLRELKHPNVISLVKVFLSH 99 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-----CcCHHHHHHHHHHHHhcCCcchhHHHHHhcc
Confidence 5888999999999999999654443 268999875543211 1234689999999999999999999999765
Q ss_pred CceEEEEEecccCCChhHHHhcC-----CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC----CcEE
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKAT-----PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF----GVAK 550 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~-----~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~----g~vK 550 (683)
...+++++||.+ .+|..+|+-+ ..++...++.|+.||+.|+.|||+ +-|+||||||.|||+..+ |.||
T Consensus 100 d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~--NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 100 DKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS--NWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred CceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh--hheeeccCCcceEEEeccCCccCeeE
Confidence 788999999995 4999988433 468999999999999999999998 569999999999999876 8999
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch-------
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT------- 623 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~------- 623 (683)
|+|||+++.+.+... .+.-....+.|.||.|||.+.+.+ .|+..+|||++|||+.|||+-.+.|.+...
T Consensus 177 IaDlGlaR~~~~plk--pl~s~d~VVVTiWYRAPELLLGa~--hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~P 252 (438)
T KOG0666|consen 177 IADLGLARLFNNPLK--PLASLDPVVVTIWYRAPELLLGAR--HYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNP 252 (438)
T ss_pred eecccHHHHhhcccc--ccccCCceEEEEEecChHHhcccc--cccchhhhHHHHHHHHHHHccCccccchhhhcccCCC
Confidence 999999998865421 111223447899999999987554 499999999999999999998777643211
Q ss_pred -----HHHHHHHHHHH-HhhccCCCC------------------------------CcCCCHHHHHHHHHhcccCCCCCC
Q 005678 624 -----QERILREDTII-KARKVEFPS------------------------------RPAVSNEAKDLIRRCLTYNQAERP 667 (683)
Q Consensus 624 -----~e~il~~~~i~-~~~~~~~p~------------------------------~~~~s~el~dLI~rCL~~dP~kRP 667 (683)
.++|+. +. ....-.||+ ...-++.+.+|+.++|++||.+|.
T Consensus 253 fq~dQl~rIf~---vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRI 329 (438)
T KOG0666|consen 253 FQHDQLDRIFE---VLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRI 329 (438)
T ss_pred chHHHHHHHHH---HcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhc
Confidence 111111 00 000001111 012345588999999999999999
Q ss_pred CHHHHhcCcccCCCC
Q 005678 668 DVLTLAQDPYLTYSK 682 (683)
Q Consensus 668 S~~eLl~hP~l~~~K 682 (683)
|+.++++|+||+..+
T Consensus 330 ta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 330 TAEQALEHPYFTEDP 344 (438)
T ss_pred cHHHHhcccccccCC
Confidence 999999999998764
No 368
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=285.26 Aligned_cols=261 Identities=29% Similarity=0.517 Sum_probs=211.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|..++.||+|.||+||+|.+..++..||+|....+... +..-..++||+-+++.++|.|||+++++.- ..+.+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddd-----egvpssalreicllkelkhknivrl~dvlh-sdkkl 76 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD-----EGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKL 76 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCC-----CCCcHHHHHHHHHHHHhhhcceeehhhhhc-cCcee
Confidence 466678899999999999999999999999998765432 222456899999999999999999999984 67788
Q ss_pred EEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 484 CTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
.+|+||| ..+|..++. -++.+....++.++.|++.||.|+|++ ++.||||||.|+||+.+|.+||+|||+++.+.-
T Consensus 77 tlvfe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh--nvlhrdlkpqnllin~ngelkladfglarafgi 153 (292)
T KOG0662|consen 77 TLVFEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH--NVLHRDLKPQNLLINRNGELKLADFGLARAFGI 153 (292)
T ss_pred EEeHHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh--hhhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence 9999999 458888884 457799999999999999999999984 599999999999999999999999999987643
Q ss_pred CcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHH-hhccC
Q 005678 563 DVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIK-ARKVE 640 (683)
Q Consensus 563 ~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~-~~~~~ 640 (683)
. +.-.+.-+.|.||.||.++.+.+ -|+...|+||.|||+.|+.. |++.|...+..+.+...-.... ...-.
T Consensus 154 p-----vrcysaevvtlwyrppdvlfgak--ly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~ 226 (292)
T KOG0662|consen 154 P-----VRCYSAEVVTLWYRPPDVLFGAK--LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQ 226 (292)
T ss_pred c-----eEeeeceeeeeeccCcceeeeee--hhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCcccc
Confidence 2 23344557899999999987654 48999999999999999996 7888877776665544322221 11122
Q ss_pred CCCC----------------------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 641 FPSR----------------------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 641 ~p~~----------------------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
||.. |.++....++++++|.-+|..|.+++.+++||||.-
T Consensus 227 wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 227 WPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred CCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 3221 334455789999999999999999999999999974
No 369
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=332.80 Aligned_cols=268 Identities=24% Similarity=0.429 Sum_probs=224.2
Q ss_pred CccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeec
Q 005678 395 FNNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLW 473 (683)
Q Consensus 395 f~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~ 473 (683)
|..++.-.+.|.+.+.||.|.+|.||++..+.+++.+|+||...+.... .++..|++|++.+ .|||++.+|
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d--------eEiE~eynil~~~~~hpnv~~fy 82 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE--------EEIELEYNMLKKYSHHPNVATFY 82 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc--------HHHHHHHHHHHhccCCCCcceEE
Confidence 3445566788999999999999999999999999999999986654322 2445688999888 599999999
Q ss_pred ccccc----CCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC
Q 005678 474 DTFEI----DQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 474 ~~f~~----d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g 547 (683)
++|.. .++.++||||||.||+.-++++. +..+.|..+..|+..++.||.+||. +.+||||||-.|||++.+|
T Consensus 83 g~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~--nkviHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 83 GAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN--NKVIHRDIKGQNVLLTENA 160 (953)
T ss_pred EEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh--cceeeecccCceEEEeccC
Confidence 99853 46789999999999999999964 4578899999999999999999998 4599999999999999999
Q ss_pred cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHH
Q 005678 548 VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQE 625 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e 625 (683)
.|||+|||++..+....+. ..+.+|||.|||||++.... ...|+..+|+||||++..||.-|.+|+.+.....
T Consensus 161 ~VKLvDFGvSaQldsT~gr-----RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr 235 (953)
T KOG0587|consen 161 EVKLVDFGVSAQLDSTVGR-----RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR 235 (953)
T ss_pred cEEEeeeeeeeeeeccccc-----ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh
Confidence 9999999999888765433 44568999999999997655 3467889999999999999999999998887765
Q ss_pred HHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 626 RILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 626 ~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.++. |..+.++.+-.+...+..+.+||..||..|...||++.++++|||++-
T Consensus 236 aLF~---IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 236 ALFL---IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred hhcc---CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 5432 222333333334567899999999999999999999999999999973
No 370
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=321.93 Aligned_cols=256 Identities=25% Similarity=0.461 Sum_probs=209.7
Q ss_pred ccccccccceeEEEEecccCceEEEEEEEcc----CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceee
Q 005678 396 NNFQILNHRYALLNLLGKGGFSEVYKAYDLV----EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVR 471 (683)
Q Consensus 396 ~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~----~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~ 471 (683)
.++.+......+.++||.|.||.||+|.... ..-.||||..+.+.. ++. .+.|+.|..+|+.++|||||+
T Consensus 382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t-~d~-----tekflqEa~iMrnfdHphIik 455 (974)
T KOG4257|consen 382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT-PDD-----TEKFLQEASIMRNFDHPHIIK 455 (974)
T ss_pred CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC-hhh-----HHHHHHHHHHHHhCCCcchhh
Confidence 3556666677777899999999999997532 234589998765432 222 457899999999999999999
Q ss_pred eccccccCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEE
Q 005678 472 LWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 472 L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vK 550 (683)
|+|+|. ....+||||+++-|.|..+|+.+ ..|+......++.||+.||.|||+. ++|||||-..|||+.+.-.+|
T Consensus 456 LIGv~~--e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk--rfVHRDIAaRNiLVsSp~CVK 531 (974)
T KOG4257|consen 456 LIGVCV--EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK--RFVHRDIAARNILVSSPQCVK 531 (974)
T ss_pred eeeeee--ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh--chhhhhhhhhheeecCcceee
Confidence 999996 56788999999999999999654 5699999999999999999999985 599999999999999999999
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHH
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILR 629 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~ 629 (683)
|+|||+++.+.++. +...+.+.-..-|||||.+.... ++..+|||.|||++||+|. |..||....+.+.|..
T Consensus 532 LaDFGLSR~~ed~~----yYkaS~~kLPIKWmaPESINfRr---FTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~ 604 (974)
T KOG4257|consen 532 LADFGLSRYLEDDA----YYKASRGKLPIKWMAPESINFRR---FTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH 604 (974)
T ss_pred ecccchhhhccccc----hhhccccccceeecCccccchhc---ccchhhHHHHHHHHHHHHHhcCCccccccccceEEE
Confidence 99999999987652 12222333345699999987555 8999999999999999985 9999987776655432
Q ss_pred HHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 630 EDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 630 ~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
. ...-..|.++.||+.+..|+.+||.++|.+||.+.+|.
T Consensus 605 i-----EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 605 I-----ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred e-----cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 1 12345677789999999999999999999999988874
No 371
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=324.63 Aligned_cols=245 Identities=28% Similarity=0.442 Sum_probs=203.8
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEID 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d 479 (683)
+.+.|.+...+|.|+||.|-.+.+..++..+++|++..... ...+|+.++... .||||++++++|. +
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----------~~~~e~~~~~~~~~h~niv~~~~v~~-~ 387 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----------DNQDEIPISLLVRDHPNIVKSHDVYE-D 387 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc-----------ccccccchhhhhcCCCcceeecceec-C
Confidence 35678888899999999999999999999999999865421 122356555555 7999999999996 7
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEe-CCCCcEEEEecCCcc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLF-DEFGVAKVTDFGLSK 558 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILL-d~~g~vKL~DFGls~ 558 (683)
+.+.++|||++.|+-|.+.+...+.+. .++..|+.+|+.|+.|||..| ||||||||+|||+ ++.|+++|+|||.++
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~~~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLDGSAGHLRLTYFGFWS 464 (612)
T ss_pred CceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeecCCCCcEEEEEechhh
Confidence 889999999999998888887766555 788889999999999999965 9999999999999 589999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK 638 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~ 638 (683)
....+ ...++-|..|.|||+.... .|+..+||||||++||+||+|+.||........++. ....
T Consensus 465 ~~~~~--------~~tp~~t~~y~APEvl~~~---~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~-----~i~~ 528 (612)
T KOG0603|consen 465 ELERS--------CDTPALTLQYVAPEVLAIQ---EYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT-----RIQM 528 (612)
T ss_pred hCchh--------hcccchhhcccChhhhccC---CCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH-----hhcC
Confidence 77654 2234678889999998733 499999999999999999999999977666533321 1122
Q ss_pred cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 639 VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 639 ~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
..|. ..+|..+++||..||..||.+||++.++..||||
T Consensus 529 ~~~s--~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 529 PKFS--ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred Cccc--cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 2222 5799999999999999999999999999999999
No 372
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=8.7e-34 Score=282.30 Aligned_cols=243 Identities=38% Similarity=0.574 Sum_probs=199.3
Q ss_pred CceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecccCCC
Q 005678 415 GFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKD 494 (683)
Q Consensus 415 gfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~~ggs 494 (683)
+||.||+|.+..++..|++|++........ ...+.+|+.+++.++|+||+++++.+. .....++++||+++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~l~~e~~~~~~ 73 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK------RERILREISILKKLKHPNIVRLYDVFE-DEDKLYLVMEYCDGGD 73 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH------HHHHHHHHHHHHhCCCCcHHHHHhhee-eCCEEEEEEeCCCCCC
Confidence 689999999888899999999865432211 467889999999999999999999986 5678899999999999
Q ss_pred hhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCccccccc
Q 005678 495 LDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQ 574 (683)
Q Consensus 495 L~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~ 574 (683)
|..++.....+++..+..++.+++.+|.|||..+ |+|+||+|.||+++.++.++|+|||++....... ....
T Consensus 74 L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------~~~~ 145 (244)
T smart00220 74 LFDLLKKRGRLSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG------LLTT 145 (244)
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECCCCcEEEccccceeeecccc------cccc
Confidence 9999977666899999999999999999999965 9999999999999999999999999998776432 1233
Q ss_pred CCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCC-cCCCHHHHH
Q 005678 575 GAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSR-PAVSNEAKD 653 (683)
Q Consensus 575 ~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~-~~~s~el~d 653 (683)
..|++.|++||.+... .++.++||||||+++|+|++|..||........+... ........... ..++..+.+
T Consensus 146 ~~~~~~~~~pE~~~~~---~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 219 (244)
T smart00220 146 FVGTPEYMAPEVLLGK---GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKK---IGKPKPPFPPPEWKISPEAKD 219 (244)
T ss_pred ccCCcCCCCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH---HhccCCCCccccccCCHHHHH
Confidence 4688999999988633 3788999999999999999999999774443333221 11111111111 128899999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCccc
Q 005678 654 LIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 654 LI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
|+.+||..+|.+||++.++++||||
T Consensus 220 ~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 220 LIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHccCCchhccCHHHHhhCCCC
Confidence 9999999999999999999999997
No 373
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-35 Score=328.76 Aligned_cols=248 Identities=31% Similarity=0.451 Sum_probs=192.1
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC---
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID--- 479 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d--- 479 (683)
.-|...+.||+||||.||+|+++.+|+.||||.+...... .......+|++++++|+|||||+++++-+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~------r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~ 86 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL------RPRERWCREIEILKKLNHPNIVKLFDIEETKFLG 86 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhccc------chHHHHHHHHHHHHHcCchhhhhhcccCCccccC
Confidence 3456678899999999999999999999999998665422 1245788999999999999999999885432
Q ss_pred --CceEEEEEecccCCChhHHHhc---CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC--CCC--cEE
Q 005678 480 --QNTFCTVLEYCSGKDLDAVLKA---TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD--EFG--VAK 550 (683)
Q Consensus 480 --~~~~~LV~Ey~~ggsL~~~L~~---~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd--~~g--~vK 550 (683)
....++|||||.||||..+|.. ...|++.+.+.++..++.||.|||+. +||||||||.||++- .+| ..|
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn--~IvHRDlKP~NIvl~~Gedgq~IyK 164 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN--GIVHRDLKPGNIVLQIGEDGQSIYK 164 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc--CceeccCCCCcEEEeecCCCceEEe
Confidence 2346799999999999999953 35699999999999999999999985 599999999999985 334 489
Q ss_pred EEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHH----H
Q 005678 551 VTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQE----R 626 (683)
Q Consensus 551 L~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e----~ 626 (683)
|+|||.|+-++++. .....+||+.|++||.+.. ...|+.-+|.|||||++|++.||..||-+..... .
T Consensus 165 LtDfG~Arel~d~s------~~~S~vGT~~YLhPel~E~--q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~ 236 (732)
T KOG4250|consen 165 LTDFGAARELDDNS------LFTSLVGTEEYLHPELYER--QKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEI 236 (732)
T ss_pred eecccccccCCCCC------eeeeecCchhhcChHHHhh--ccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchh
Confidence 99999999887653 3444589999999999874 2348889999999999999999999996554432 2
Q ss_pred HHHHHHHHHh------------hcc----CCCCCcCCCHH----HHHHHHHhcccCCCCCC
Q 005678 627 ILREDTIIKA------------RKV----EFPSRPAVSNE----AKDLIRRCLTYNQAERP 667 (683)
Q Consensus 627 il~~~~i~~~------------~~~----~~p~~~~~s~e----l~dLI~rCL~~dP~kRP 667 (683)
.+...+ .+. +++ .+|.+..++.. +-..+..+|..+|.+|.
T Consensus 237 ~~~~~t-kkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 237 MWHIIT-KKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred hhhhhc-cCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 222111 011 111 23333344443 34667788899999998
No 374
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-36 Score=321.54 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=218.4
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
+.++..||-||||.|=++........+|+|+++..... +.....|+..|-+||..++.|.||+||..|. +..++|
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIV----dtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr-d~kyvY 496 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIV----DTKQQEHVFSERNIMMECRSDFIVRLYRTFR-DSKYVY 496 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhcc----chhHHHHHHhHHHHHHhcCchHHHHHHHHhc-cchhhh
Confidence 45667899999999999865555556899987654332 2334578999999999999999999999997 788999
Q ss_pred EEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCc
Q 005678 485 TVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDV 564 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~ 564 (683)
++||-|-||.|+..|...+.|.+..++.++..++.|+.|||.++ ||+|||||.|.||+.+|.+||.|||+|+.+...
T Consensus 497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g- 573 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG- 573 (732)
T ss_pred hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC--ceeccCChhheeeccCCceEEeehhhHHHhccC-
Confidence 99999999999999999999999999999999999999999966 999999999999999999999999999988754
Q ss_pred CCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCC
Q 005678 565 GSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSR 644 (683)
Q Consensus 565 ~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~ 644 (683)
..+.+.+|||.|.|||++...+ .+..+|.||||+++||||+|.+||...+....+-. .+.....+.||
T Consensus 574 -----~KTwTFcGTpEYVAPEIILnKG---HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~--ILkGid~i~~P-- 641 (732)
T KOG0614|consen 574 -----RKTWTFCGTPEYVAPEIILNKG---HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL--ILKGIDKIEFP-- 641 (732)
T ss_pred -----CceeeecCCcccccchhhhccC---cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH--HHhhhhhhhcc--
Confidence 3466779999999999987555 78999999999999999999999988776554321 12223345666
Q ss_pred cCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCC
Q 005678 645 PAVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTY 680 (683)
Q Consensus 645 ~~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~ 680 (683)
..++..+.+||++++..+|.+|.- +.+|-+|-||..
T Consensus 642 r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 642 RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 578999999999999999999985 899999999864
No 375
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=304.34 Aligned_cols=261 Identities=25% Similarity=0.375 Sum_probs=204.8
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhh-cCCCceeeeccccccCC
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKT-LVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~-L~HpnIV~L~~~f~~d~ 480 (683)
.+..+-+..||.|+||+|++..++.+|+..|||.+..+.. .+. .+.++.|.....+ -+.||||++||+.. ..
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~---~ke---q~rll~e~d~~mks~~cp~IVkfyGa~F-~E 135 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI---EKE---QKRLLMEHDTVMKSSNCPNIVKFYGALF-SE 135 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc---hHH---HHHHHHHHHHHHhhcCCcHHHHHhhhhh-cC
Confidence 3444556789999999999999999999999999876643 111 3456667665544 47999999999986 45
Q ss_pred ceEEEEEecccCCChhHHHh-----cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 481 NTFCTVLEYCSGKDLDAVLK-----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~-----~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
+..+|.||+| ..+|+.+.+ ....+++..+..|....+.||.||-.. .+||||||||+||||+..|.+||||||
T Consensus 136 GdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~-lkiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 136 GDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE-LKIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred CceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH-hhhhhccCChhheEEecCCCEeeeccc
Confidence 5677999999 568776653 335699999999999999999999875 579999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~ 635 (683)
+|..+.+.... +.-+|...|||||.+..... .|+-++||||||++|||+.||+.||..-.+....+. .+..
T Consensus 214 IcGqLv~SiAk------T~daGCrpYmAPERi~p~~~-gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~--~Vv~ 284 (361)
T KOG1006|consen 214 ICGQLVDSIAK------TVDAGCRPYMAPERIDPSDK-GYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC--QVVI 284 (361)
T ss_pred chHhHHHHHHh------hhccCCccccChhccCCccC-CcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH--HHHc
Confidence 99877654322 22378889999999976554 489999999999999999999999966544322222 2222
Q ss_pred hhc--cCCCC-CcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 636 ARK--VEFPS-RPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 636 ~~~--~~~p~-~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
... +.++. ...++..+..||.-||.+|..+||.+.+|.++||++.
T Consensus 285 gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 285 GDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred CCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 221 12222 2357899999999999999999999999999999864
No 376
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=330.71 Aligned_cols=255 Identities=24% Similarity=0.366 Sum_probs=215.6
Q ss_pred cccceeEEEEecccCceEEEEEEEccCC---eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEH---RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g---~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
......+.++||.|.||+||+|..+..| ..||||.++... . +.....|+.|..||.++.||||++|.|+..
T Consensus 627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--t----ekqrrdFL~EAsIMGQFdHPNIIrLEGVVT 700 (996)
T KOG0196|consen 627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--T----EKQRRDFLSEASIMGQFDHPNIIRLEGVVT 700 (996)
T ss_pred ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--c----HHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence 3445678899999999999999877665 469999885432 1 123578999999999999999999999985
Q ss_pred cCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
......||+|||++|+|+.+|+.+ +.|+.-++.-+++.|+.|++||.+.+ +|||||-..|||++.+..+|++||||
T Consensus 701 -ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 701 -KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred -cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccceEEEeccccc
Confidence 667788999999999999999644 67999999999999999999999865 99999999999999999999999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH-cCCCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML-FGRRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL-tG~~PF~~~~~~e~il~~~~i~~ 635 (683)
++.+.++. ....-+..+.--.+|.|||.+...+ ++..+|||||||+|||.+ +|.+||....+++.+-. .
T Consensus 778 SRvledd~--~~~ytt~GGKIPiRWTAPEAIa~RK---FTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka-----I 847 (996)
T KOG0196|consen 778 SRVLEDDP--EAAYTTLGGKIPIRWTAPEAIAYRK---FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA-----I 847 (996)
T ss_pred eeecccCC--CccccccCCccceeecChhHhhhcc---cCchhhccccceEEEEecccCCCcccccchHHHHHH-----H
Confidence 99886654 1112222223346799999998777 999999999999999988 59999999988876643 2
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
...+.+|.+..||..+..|+..||.++...||.+.+|+.
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 356788999999999999999999999999999999875
No 377
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=309.20 Aligned_cols=265 Identities=25% Similarity=0.396 Sum_probs=210.5
Q ss_pred CccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCC--C----c
Q 005678 395 FNNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVH--H----H 468 (683)
Q Consensus 395 f~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~H--p----n 468 (683)
|..-.++.++|.++.++|+|.||.|-.+.|..++.+||||+++. ...|...++-|+.++.++.+ | .
T Consensus 81 ~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~--------V~kYreAa~iEi~vLqki~~~DP~g~~r 152 (415)
T KOG0671|consen 81 YQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN--------VDKYREAALIEIEVLQKINESDPNGKFR 152 (415)
T ss_pred EEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHH--------HHHHhhHHHHHHHHHHHHHhcCCCCceE
Confidence 33445678999999999999999999999999999999998732 23455667789999999942 2 4
Q ss_pred eeeeccccccCCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-
Q 005678 469 IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE- 545 (683)
Q Consensus 469 IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~- 545 (683)
+|.+.++|+ -.++.|||+|.+ |.++.++|+.+ .+++...++.|+.|++.+++|||+.+ ++|-||||+|||+.+
T Consensus 153 cv~m~~wFd-yrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss 228 (415)
T KOG0671|consen 153 CVQMRDWFD-YRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSS 228 (415)
T ss_pred EEeeehhhh-ccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEecc
Confidence 788888887 578899999999 77999999765 46889999999999999999999955 999999999999831
Q ss_pred -------------------CCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHH
Q 005678 546 -------------------FGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGI 606 (683)
Q Consensus 546 -------------------~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGv 606 (683)
+..++|+|||.|...... .+..+.|..|.|||++.+.+ ++.++||||+||
T Consensus 229 ~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--------hs~iVsTRHYRAPEViLgLG---wS~pCDvWSiGC 297 (415)
T KOG0671|consen 229 EYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--------HSTIVSTRHYRAPEVILGLG---WSQPCDVWSIGC 297 (415)
T ss_pred ceEEEeccCCccceeccCCCcceEEEecCCcceeccC--------cceeeeccccCCchheeccC---cCCccCceeeee
Confidence 345999999999876543 23447899999999999877 999999999999
Q ss_pred HHHHHHcCCCCCCCCchHHHHHHHHH-----------------HHHhhccCCCCC--------------------cCC--
Q 005678 607 LFYQMLFGRRPFGHDQTQERILREDT-----------------IIKARKVEFPSR--------------------PAV-- 647 (683)
Q Consensus 607 ILyELLtG~~PF~~~~~~e~il~~~~-----------------i~~~~~~~~p~~--------------------~~~-- 647 (683)
||+|+.+|...|....+.+.+.--.. ......+.||.. ...
T Consensus 298 IL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~ 377 (415)
T KOG0671|consen 298 ILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDL 377 (415)
T ss_pred EEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcH
Confidence 99999999999976665443311001 111112222211 000
Q ss_pred -CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 648 -SNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 648 -s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
-..+.+||++||.+||.+|+|+.+++.||||...+
T Consensus 378 e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 378 EHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred HHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 12478999999999999999999999999998654
No 378
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-35 Score=317.99 Aligned_cols=258 Identities=23% Similarity=0.366 Sum_probs=207.1
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
...+..+.+.||+|-||+|.+|. ...+..||||+++..... .....|.+|+.+|.+|+|||||.|+++|. .+
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~~------~~r~~F~kEIkiLsqLkhPNIveLvGVC~-~D 607 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDATK------NARNDFLKEIKILSRLKHPNIVELLGVCV-QD 607 (807)
T ss_pred chhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccch------hHHHHHHHHHHHHhccCCCCeeEEEeeee-cC
Confidence 45677888999999999999997 455799999998765432 22468999999999999999999999996 56
Q ss_pred ceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
+.+|+|+|||++|+|..++.++ +.+.-.....|+.||++|++||.+ .++|||||.+.|+|++.++++||+|||+++
T Consensus 608 ePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes--~nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 608 DPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES--LNFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred CchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh--hchhhccccccceeecCcccEEecCccccc
Confidence 6899999999999999999877 333445566799999999999998 469999999999999999999999999998
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH--cCCCCCCCCchHHHHHHHHHHHHh
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML--FGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL--tG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
-+..... .......+-..+|||||++..++ ++.++|||+|||++||++ |...||....+.+.+.....+...
T Consensus 686 ~lysg~y---y~vqgr~vlpiRwmawEsillgk---FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~ 759 (807)
T KOG1094|consen 686 NLYSGDY---YRVQGRAVLPIRWMAWESILLGK---FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRD 759 (807)
T ss_pred ccccCCc---eeeecceeeeeeehhHHHHHhcc---ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCC
Confidence 6654321 11111123456799999998777 999999999999999987 588999877665544443333322
Q ss_pred h--ccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 637 R--KVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 637 ~--~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
. .+-.+.++.|+..+.++|.+||.++-++||+++++..
T Consensus 760 ~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 760 QGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred CCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 2 2233445689999999999999999999999999854
No 379
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=3.1e-34 Score=328.92 Aligned_cols=264 Identities=19% Similarity=0.249 Sum_probs=176.8
Q ss_pred cccceeEEEEecccCceEEEEEEEccC----CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVE----HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~----g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
..+.|.+.+.||+|+||.||+|.+..+ +..||||.+..... . .....+ .+....+.+++.++..|
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~------e~~~~e--~l~~~~~~~~~~~~~~~ 198 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---V------EIWMNE--RVRRACPNSCADFVYGF 198 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---h------HHHHHH--HHHhhchhhHHHHHHhh
Confidence 457899999999999999999999888 89999998643211 0 011111 11122223333333222
Q ss_pred c-----cCCceEEEEEecccCCChhHHHhcCCC--------------------cchHHHHHHHHHHHHHHHHHHhcCCce
Q 005678 477 E-----IDQNTFCTVLEYCSGKDLDAVLKATPV--------------------LPEREARIIIVQIFQGLIYLNKRAQKI 531 (683)
Q Consensus 477 ~-----~d~~~~~LV~Ey~~ggsL~~~L~~~~~--------------------Lse~~~~~I~~qIa~aL~yLH~~g~~I 531 (683)
. .....+++||||+++++|.+++..... .....+..|+.||+.||.|||+.+ |
T Consensus 199 ~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--I 276 (566)
T PLN03225 199 LEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--I 276 (566)
T ss_pred hcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--E
Confidence 1 245678999999999999999864321 123346679999999999999865 9
Q ss_pred EecccCCcceEeCC-CCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCC-----------------
Q 005678 532 IHYDLKPGNVLFDE-FGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTP----------------- 593 (683)
Q Consensus 532 IHrDLKP~NILLd~-~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~----------------- 593 (683)
|||||||+||||+. ++.+||+|||+++.+..... .......||+.|+|||.+......
T Consensus 277 iHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~----~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~ 352 (566)
T PLN03225 277 VHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGIN----YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLW 352 (566)
T ss_pred EeCcCCHHHEEEeCCCCcEEEEeCCCccccccccc----cCCcccccCCCccChHHhhccCCCCCCccccccccccchhc
Confidence 99999999999985 68999999999986543211 123345789999999976432211
Q ss_pred --CCCchhHHHHHHHHHHHHHcCCCCCCCCchHHH-HHHH-----HHHHHhhccCC--------CCCcCCCHHHHHHHHH
Q 005678 594 --LISSKVDVWSAGILFYQMLFGRRPFGHDQTQER-ILRE-----DTIIKARKVEF--------PSRPAVSNEAKDLIRR 657 (683)
Q Consensus 594 --~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~-il~~-----~~i~~~~~~~~--------p~~~~~s~el~dLI~r 657 (683)
.++.++|||||||+||||+++..|+........ .+.. ........... ......+..+.+||.+
T Consensus 353 ~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~ 432 (566)
T PLN03225 353 QLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKS 432 (566)
T ss_pred cccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHH
Confidence 244567999999999999998776543211100 0000 00000000000 0001123346689999
Q ss_pred hcccCCCCCCCHHHHhcCcccCCC
Q 005678 658 CLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 658 CL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
||.+||.+|||+.++++||||+..
T Consensus 433 mL~~dP~kR~ta~e~L~Hpff~~~ 456 (566)
T PLN03225 433 MMRFKGRQRISAKAALAHPYFDRE 456 (566)
T ss_pred HccCCcccCCCHHHHhCCcCcCCC
Confidence 999999999999999999999753
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.8e-36 Score=298.55 Aligned_cols=274 Identities=26% Similarity=0.434 Sum_probs=215.8
Q ss_pred ccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccc
Q 005678 396 NNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDT 475 (683)
Q Consensus 396 ~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~ 475 (683)
..|-.....|.-+.+||+|.||+||+|+...+|+.||+|+.-. ++.+..+-..+++|+.||..|+|+|++.++..
T Consensus 10 ~P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlm-----eneKeGfpitalreikiL~~lkHenv~nliEi 84 (376)
T KOG0669|consen 10 EPFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLM-----ENEKEGFPITALREIKILQLLKHENVVNLIEI 84 (376)
T ss_pred CCceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHH-----hccccCCcHHHHHHHHHHHHhcchhHHHHHHH
Confidence 3444566788889999999999999999999999999986422 22233445678999999999999999999988
Q ss_pred ccc-------CCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC
Q 005678 476 FEI-------DQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 476 f~~-------d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g 547 (683)
|.. +...+|+|+.+|+ .+|..+|... -.++..++..++.++..||.|+|.. .|+|||+||.|+||+.+|
T Consensus 85 c~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~--kilHRDmKaaNvLIt~dg 161 (376)
T KOG0669|consen 85 CRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN--KILHRDMKAANVLITKDG 161 (376)
T ss_pred HhhccCCcccccceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh--hHHhhcccHhhEEEcCCc
Confidence 753 3456999999995 5999998654 5699999999999999999999984 599999999999999999
Q ss_pred cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH
Q 005678 548 VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI 627 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i 627 (683)
.+||+|||+++.+........ .-+...+.|.||.+||.+.+.. .|+++.|||..|||+.+|++|.+-|.....+..+
T Consensus 162 ilklADFGlar~fs~~~n~~k-prytnrvvTLwYrppEllLG~r--~yg~~iDiWgAgCimaeMwtrspimqgnteqqql 238 (376)
T KOG0669|consen 162 ILKLADFGLARAFSTSKNVVK-PRYTNRVVTLWYRPPELLLGDR--EYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQL 238 (376)
T ss_pred eEEeeccccccceecccccCC-CCcccceeeeecCCHHHhhccc--ccCCcchhHhHHHHHHHHHccCccccCChHHHHH
Confidence 999999999987654422221 1133446799999999987655 4899999999999999999999999888777766
Q ss_pred HHHHHHHHhh-ccCCCCC---------------------------c-CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 628 LREDTIIKAR-KVEFPSR---------------------------P-AVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 628 l~~~~i~~~~-~~~~p~~---------------------------~-~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....+-... +-.||.. | .-.+++.+|+..+|.+||.+|+++.++++|.||
T Consensus 239 ~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F 318 (376)
T KOG0669|consen 239 HLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFF 318 (376)
T ss_pred HHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhh
Confidence 4322221111 1111110 1 113478899999999999999999999999998
Q ss_pred CC
Q 005678 679 TY 680 (683)
Q Consensus 679 ~~ 680 (683)
-.
T Consensus 319 ~k 320 (376)
T KOG0669|consen 319 WK 320 (376)
T ss_pred hc
Confidence 53
No 381
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=319.80 Aligned_cols=260 Identities=23% Similarity=0.339 Sum_probs=213.0
Q ss_pred cccceeEEEEecccCceEEEEEEEcc-C--CeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLV-E--HRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFE 477 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~-~--g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~ 477 (683)
-.+...+.++||+|+||.|++|.... . .-.||||.+....... .+..|++|+.+|-+|+|||+++|||+.-
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~------~mddflrEas~M~~L~H~hliRLyGvVl 181 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA------IMDDFLREASHMLKLQHPHLIRLYGVVL 181 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch------hHHHHHHHHHHHHhccCcceeEEeeeec
Confidence 34567778999999999999996543 2 3469999987654332 4678999999999999999999999985
Q ss_pred cCCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 478 IDQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
+ ....+|||++++|+|.+.|.+ ...|....+..++.||+.|+.||-.+. +|||||-..||||-..-.|||+|||
T Consensus 182 -~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 182 -D-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred -c-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheecccceeeeeccc
Confidence 3 667799999999999999965 356888889999999999999999865 9999999999999998999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~ 634 (683)
|.+.+.... ..+.+..+..--+.|+|||++...+ ++.++|||+|||+||||++ |.-||.+......+...
T Consensus 258 LmRaLg~ne--d~Yvm~p~rkvPfAWCaPEsLrh~k---FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i---- 328 (1039)
T KOG0199|consen 258 LMRALGENE--DMYVMAPQRKVPFAWCAPESLRHRK---FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI---- 328 (1039)
T ss_pred ceeccCCCC--cceEecCCCcCcccccCHhHhcccc---ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc----
Confidence 999886542 2223333444556799999998666 9999999999999999996 89999887765533221
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
. ..-.++.++.|+.++.+++..||..+|.+||++..|..+-+++.
T Consensus 329 D-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 329 D-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred c-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 1 34456667789999999999999999999999999976655543
No 382
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.9e-33 Score=313.52 Aligned_cols=275 Identities=20% Similarity=0.232 Sum_probs=196.3
Q ss_pred ccccceeEEEEecccCceEEEEEEEc----------------cCCeEEEEEEeccCcccchhhH-------HHHHHHHHH
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDL----------------VEHRYVACKLHGLNAQWSEDKK-------QSYIRHAIR 456 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~----------------~~g~~VAVKi~~~~~~~~~~~~-------~~~i~~~~r 456 (683)
+..+.|.+.+.||+|+||.||+|.+. ..++.||||.+........... .........
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 45778999999999999999999752 2456799998755432111000 001123455
Q ss_pred HHHHHhhcCCCce-----eeecccccc-------CCceEEEEEecccCCChhHHHhcC----------------------
Q 005678 457 EYNIHKTLVHHHI-----VRLWDTFEI-------DQNTFCTVLEYCSGKDLDAVLKAT---------------------- 502 (683)
Q Consensus 457 Ei~il~~L~HpnI-----V~L~~~f~~-------d~~~~~LV~Ey~~ggsL~~~L~~~---------------------- 502 (683)
|+.++..++|.++ +.++++|.. ..+..++||||+++++|.+++...
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7778888877654 566666542 245689999999999999988532
Q ss_pred --CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCc
Q 005678 503 --PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYW 580 (683)
Q Consensus 503 --~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~ 580 (683)
..+++..++.++.|++.||.|||..+ |+||||||.|||++.++.+||+|||++..+..... .....+.+|+.
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~----~~~~~g~~tp~ 375 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN----FNPLYGMLDPR 375 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECCCCcEEEEeCcCccccccCCc----cCccccCCCcc
Confidence 12356678889999999999999865 99999999999999999999999999976543211 11223456899
Q ss_pred cCCcccccccCCC-------------------CCCchhHHHHHHHHHHHHHcCCC-CCCCCchHHHHH-------HHHHH
Q 005678 581 YLPPECFELSKTP-------------------LISSKVDVWSAGILFYQMLFGRR-PFGHDQTQERIL-------REDTI 633 (683)
Q Consensus 581 Y~APE~~~~~~~~-------------------~~s~ksDVWSLGvILyELLtG~~-PF~~~~~~e~il-------~~~~i 633 (683)
|+|||.+...... ....++||||+|||+|+|++|.. ||.........+ .....
T Consensus 376 Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~ 455 (507)
T PLN03224 376 YSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM 455 (507)
T ss_pred eeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh
Confidence 9999987543210 01235799999999999999875 775322211111 11112
Q ss_pred HHhhccCCCCCcCCCHHHHHHHHHhcccCC---CCCCCHHHHhcCcccCC
Q 005678 634 IKARKVEFPSRPAVSNEAKDLIRRCLTYNQ---AERPDVLTLAQDPYLTY 680 (683)
Q Consensus 634 ~~~~~~~~p~~~~~s~el~dLI~rCL~~dP---~kRPS~~eLl~hP~l~~ 680 (683)
.....+.|+....+++.+++||.+||..+| .+|+|+.++|.||||..
T Consensus 456 ~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 456 YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 233445666667889999999999999766 68999999999999975
No 383
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=290.38 Aligned_cols=267 Identities=25% Similarity=0.381 Sum_probs=215.8
Q ss_pred ccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecc
Q 005678 396 NNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWD 474 (683)
Q Consensus 396 ~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~ 474 (683)
..+.+--+.|.++++||+|+|..|.++....+.+.||+|+++......++ .+.-...|-.+..+. +||.+|-|+.
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~ndde----didwvqtek~vfe~asn~pflvglhs 318 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDE----DIDWVQTEKHVFEQASNNPFLVGLHS 318 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcc----cchhHHhhHHHHHhccCCCeEEehhh
Confidence 34555567899999999999999999999999999999998665332221 133344455555554 7999999999
Q ss_pred ccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEec
Q 005678 475 TFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDF 554 (683)
Q Consensus 475 ~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DF 554 (683)
+|+ ....+++|.||.+||+|..++.....||+..++.+...|+.||.|||++| ||+||||.+|||||..|++||+|+
T Consensus 319 cfq-tesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg--iiyrdlkldnvlldaeghikltdy 395 (593)
T KOG0695|consen 319 CFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDY 395 (593)
T ss_pred hhc-ccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC--eeeeeccccceEEccCCceeeccc
Confidence 997 56678899999999999999988888999999999999999999999987 999999999999999999999999
Q ss_pred CCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCC------chHHHHH
Q 005678 555 GLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHD------QTQERIL 628 (683)
Q Consensus 555 Gls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~------~~~e~il 628 (683)
|+|+---.+ -..+++.+|||.|+|||.+.+.. |...+|+|+|||++|||+.|+.||... .+.+.++
T Consensus 396 gmcke~l~~-----gd~tstfcgtpnyiapeilrgee---ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedyl 467 (593)
T KOG0695|consen 396 GMCKEGLGP-----GDTTSTFCGTPNYIAPEILRGEE---YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYL 467 (593)
T ss_pred chhhcCCCC-----CcccccccCCCcccchhhhcccc---cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHH
Confidence 999753221 24577889999999999998655 889999999999999999999999531 2222222
Q ss_pred HHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCC------HHHHhcCcccCCC
Q 005678 629 REDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPD------VLTLAQDPYLTYS 681 (683)
Q Consensus 629 ~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS------~~eLl~hP~l~~~ 681 (683)
- .++....+..|. .+|-.+..+++..|.+||.+|.. +.++-.||||+..
T Consensus 468 f--qvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 468 F--QVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred H--HHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 1 233344455553 56777888999999999999973 6788999999864
No 384
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-33 Score=305.10 Aligned_cols=256 Identities=21% Similarity=0.363 Sum_probs=208.8
Q ss_pred CccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecc
Q 005678 395 FNNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWD 474 (683)
Q Consensus 395 f~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~ 474 (683)
...|++-.....+...||-|.||+||.|+.+.-.-.||||.++.+. --+.+|+.|..+|+.+.|||+|+|++
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt--------MeveEFLkEAAvMKeikHpNLVqLLG 330 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------MEVEEFLKEAAVMKEIKHPNLVQLLG 330 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc--------hhHHHHHHHHHHHHhhcCccHHHHhh
Confidence 3566776777778899999999999999988888899999875432 22678999999999999999999999
Q ss_pred ccccCCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEE
Q 005678 475 TFEIDQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVT 552 (683)
Q Consensus 475 ~f~~d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~ 552 (683)
+|. ....||||+|||..|+|.+||.+. ..++.-.+..++.||.+|+.||..+ ++|||||-..|+|+.++..+||+
T Consensus 331 VCT-~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk--nFIHRDLAARNCLVgEnhiVKvA 407 (1157)
T KOG4278|consen 331 VCT-HEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLVGENHIVKVA 407 (1157)
T ss_pred hhc-cCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh--hhhhhhhhhhhccccccceEEee
Confidence 997 556799999999999999999654 3467777788999999999999874 59999999999999999999999
Q ss_pred ecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHH
Q 005678 553 DFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILRED 631 (683)
Q Consensus 553 DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~ 631 (683)
||||++++..+.... .....-.+-|.|||.+.... ++.|+|||+|||+||||.| |-.||...+-...+ .
T Consensus 408 DFGLsRlMtgDTYTA----HAGAKFPIKWTAPEsLAyNt---FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY-~-- 477 (1157)
T KOG4278|consen 408 DFGLSRLMTGDTYTA----HAGAKFPIKWTAPESLAYNT---FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-G-- 477 (1157)
T ss_pred ccchhhhhcCCceec----ccCccCcccccCcccccccc---cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH-H--
Confidence 999999987653211 11111234599999887555 8999999999999999996 88899765543322 1
Q ss_pred HHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 632 TIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 632 ~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
.....+....+..|++.+.+|++.||.++|.+||++.++-
T Consensus 478 --LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 478 --LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred --HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 1223455555678999999999999999999999988874
No 385
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.5e-33 Score=304.10 Aligned_cols=260 Identities=27% Similarity=0.431 Sum_probs=207.0
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC------CCceeee
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV------HHHIVRL 472 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~------HpnIV~L 472 (683)
+++..+|.+....|+|-||+|..|.|...|..|||||+..+. ...+.=++|+.||++|+ --|+++|
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE--------~M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE--------VMHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch--------HHhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 457889999999999999999999999999999999996542 22356678999999995 3489999
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcCC---CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCc
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKATP---VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGV 548 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~---~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~ 548 (683)
+-.|. ..+++|||+|.+ ..+|..+|++.+ .|....++.++.|++.||..|-..+ |+|.||||+|||+++ ...
T Consensus 500 ~r~F~-hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 500 FRHFK-HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNI 575 (752)
T ss_pred HHHhh-hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcce
Confidence 99997 688999999998 679999997664 4889999999999999999999855 999999999999996 457
Q ss_pred EEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHH
Q 005678 549 AKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERIL 628 (683)
Q Consensus 549 vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il 628 (683)
+||||||.|..+....- ..+..+..|.|||++.+.. |++..|+||+||+||||.||+..|.+..+..++-
T Consensus 576 LKLCDfGSA~~~~enei-------tPYLVSRFYRaPEIiLG~~---yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLr 645 (752)
T KOG0670|consen 576 LKLCDFGSASFASENEI-------TPYLVSRFYRAPEIILGLP---YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLR 645 (752)
T ss_pred eeeccCccccccccccc-------cHHHHHHhccCcceeecCc---ccCCccceeeceeeEEeeccceecCCCCcHHHHH
Confidence 99999999987654311 1113455699999998665 9999999999999999999999998877666542
Q ss_pred H---------HHHHHHhh--------ccCC---------------------C---------CCcCCC-------HHHHHH
Q 005678 629 R---------EDTIIKAR--------KVEF---------------------P---------SRPAVS-------NEAKDL 654 (683)
Q Consensus 629 ~---------~~~i~~~~--------~~~~---------------------p---------~~~~~s-------~el~dL 654 (683)
. ...+.+.. .++| | ..+.++ ..+.+|
T Consensus 646 l~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdL 725 (752)
T KOG0670|consen 646 LFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDL 725 (752)
T ss_pred HHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHH
Confidence 1 00000000 0000 0 001122 358899
Q ss_pred HHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 655 IRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 655 I~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
+..||.+||++|.++.++|.||||+.
T Consensus 726 Ldkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 726 LDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHhccChhhcCCHHHHhcCCcccC
Confidence 99999999999999999999999974
No 386
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.7e-32 Score=332.49 Aligned_cols=245 Identities=19% Similarity=0.261 Sum_probs=185.1
Q ss_pred cceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCce
Q 005678 403 HRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 403 ~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~ 482 (683)
..|.....||+|+||.||+|.+..++..||||.+..... ....|+.++++++|||||+++++|. +.+.
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~l~~l~HpnIv~~~~~~~-~~~~ 757 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----------IPSSEIADMGKLQHPNIVKLIGLCR-SEKG 757 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----------ccHHHHHHHhhCCCCCcceEEEEEE-cCCC
Confidence 346667889999999999999989999999998753221 1123578899999999999999996 5677
Q ss_pred EEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhc-CCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 483 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKR-AQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 483 ~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~-g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
+|+|||||++|+|.+++.. +++..+..|+.+|+.||.|||.. .++|+||||||+|||++.++..++. ||......
T Consensus 758 ~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~ 833 (968)
T PLN00113 758 AYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC 833 (968)
T ss_pred CEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc
Confidence 8999999999999999963 88999999999999999999954 3569999999999999998888876 66654332
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHH-HHh---
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQE-RILREDTI-IKA--- 636 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e-~il~~~~i-~~~--- 636 (683)
.. ....||+.|+|||++.... ++.++|||||||++|||++|+.||....... .+...... ...
T Consensus 834 ~~---------~~~~~t~~y~aPE~~~~~~---~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 901 (968)
T PLN00113 834 TD---------TKCFISSAYVAPETRETKD---ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHL 901 (968)
T ss_pred cC---------CCccccccccCcccccCCC---CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccch
Confidence 11 1226899999999986443 8999999999999999999999985322110 01100000 000
Q ss_pred ---hccCC----CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 637 ---RKVEF----PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 637 ---~~~~~----p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
..... +.......++.+++.+||..+|.+||++.++++.
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred hheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 00000 1111223357789999999999999999999753
No 387
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.1e-31 Score=286.74 Aligned_cols=133 Identities=35% Similarity=0.512 Sum_probs=116.7
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-----CC---ceeee
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-----HH---HIVRL 472 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-----Hp---nIV~L 472 (683)
.+.||.+.++||.|.|++||+|+|..+.++||+|+.+. .+.|.+.++.||.+|++++ |+ +||+|
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS--------AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~L 147 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS--------AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQL 147 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh--------hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeee
Confidence 34899999999999999999999999999999999743 2456778899999999984 33 79999
Q ss_pred cccccc---CCceEEEEEecccCCChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEe
Q 005678 473 WDTFEI---DQNTFCTVLEYCSGKDLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLF 543 (683)
Q Consensus 473 ~~~f~~---d~~~~~LV~Ey~~ggsL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILL 543 (683)
+|.|.+ ++.++|+|+|++ |..|..+|+. +..++...++.|++||+.||.|||.. .+|||-||||.|||+
T Consensus 148 lD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e-cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 148 LDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE-CGIIHTDLKPENVLL 221 (590)
T ss_pred eccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh-cCccccCCCcceeee
Confidence 999976 467899999999 7788888853 46799999999999999999999987 369999999999998
No 388
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=2.5e-32 Score=270.75 Aligned_cols=258 Identities=23% Similarity=0.445 Sum_probs=204.6
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeecccccc-
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEI- 478 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~- 478 (683)
..+.|++.+.+|+|.|++||.|++..++..++||+++.-. .+.+.||+.||..|. ||||++|+++...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp 105 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK----------KKKIKREIKILQNLRGGPNIIKLLDIVKDP 105 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH----------HHHHHHHHHHHHhccCCCCeeehhhhhcCc
Confidence 3568999999999999999999999999999999985421 356889999999997 9999999999853
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCcEEEEecCCc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGVAKVTDFGLS 557 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~vKL~DFGls 557 (683)
....+.+|+||..+.+...+ .+.|+...++.++.+++.||.|+|+.| |+|||+||.|++||. .-.++|+|+|+|
T Consensus 106 ~SktpaLiFE~v~n~Dfk~l---y~tl~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 106 ESKTPSLIFEYVNNTDFKQL---YPTLTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred cccCchhHhhhhccccHHHH---hhhhchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeechhhceeeeeecchH
Confidence 34568899999988877666 345889999999999999999999977 999999999999994 567999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCC-CchHHHHHHHHHHHHh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGH-DQTQERILREDTIIKA 636 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~-~~~~e~il~~~~i~~~ 636 (683)
.+..... + ....+.+..|--||.+.... .|+..-|+|||||+|..|++.+-||-+ .++.+.+.....+...
T Consensus 181 EFYHp~~-----e-YnVRVASRyfKGPELLVdy~--~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt 252 (338)
T KOG0668|consen 181 EFYHPGK-----E-YNVRVASRYFKGPELLVDYQ--MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGT 252 (338)
T ss_pred hhcCCCc-----e-eeeeeehhhcCCchheeech--hccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhCh
Confidence 8875431 1 22336677899999987544 488999999999999999999999843 3344444332211100
Q ss_pred h---------ccC---------------------CCCC-cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 637 R---------KVE---------------------FPSR-PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 637 ~---------~~~---------------------~p~~-~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
. .+. .+.. .-+++++.+|+.++|.+|-.+|||+.+++.||||...
T Consensus 253 ~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 253 DELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred HHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 0 000 0111 2356899999999999999999999999999999753
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=8.4e-33 Score=312.51 Aligned_cols=243 Identities=29% Similarity=0.454 Sum_probs=191.3
Q ss_pred EEEecccCceE-EEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeeccccccCCceEEE
Q 005678 408 LNLLGKGGFSE-VYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 408 ~~~LGkGgfG~-Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~d~~~~~L 485 (683)
-+.+|.|+.|+ ||+| ...|+.||||.+-. .....+.+|+..|..- .|||||++|+.- .+....||
T Consensus 514 ~eilG~Gs~Gt~Vf~G--~ye~R~VAVKrll~----------e~~~~A~rEi~lL~eSD~H~NviRyyc~E-~d~qF~YI 580 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRG--VYEGREVAVKRLLE----------EFFDFAQREIQLLQESDEHPNVIRYYCSE-QDRQFLYI 580 (903)
T ss_pred HHHcccCCCCcEEEEE--eeCCceehHHHHhh----------HhHHHHHHHHHHHHhccCCCceEEEEeec-cCCceEEE
Confidence 45689999885 7999 47899999997522 3345678999999988 599999999654 58889999
Q ss_pred EEecccCCChhHHHhcCC----CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC---C--CcEEEEecCC
Q 005678 486 VLEYCSGKDLDAVLKATP----VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE---F--GVAKVTDFGL 556 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~~----~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~---~--g~vKL~DFGl 556 (683)
..|+| ..+|.+++.... ....-..+.++.|++.||.+||+.+ ||||||||.||||+. + ..++|+|||+
T Consensus 581 alELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 581 ALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred EehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEeccccc
Confidence 99999 569999997641 1111345778999999999999955 999999999999975 2 4799999999
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcC-CCCCCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFG-RRPFGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG-~~PF~~~~~~e~il~~~~i~~ 635 (683)
|+.+..+.. .....+.+.||.+|+|||++.... -+..+|||||||++|++++| .+||+.....+.-+ ..
T Consensus 658 sKkl~~~~s--S~~r~s~~sGt~GW~APE~L~~~~---~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI-----l~ 727 (903)
T KOG1027|consen 658 SKKLAGGKS--SFSRLSGGSGTSGWQAPEQLREDR---KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI-----LT 727 (903)
T ss_pred ccccCCCcc--hhhcccCCCCcccccCHHHHhccc---cCcccchhhcCceEEEEecCCccCCCchHHhhhhh-----hc
Confidence 999876543 334467789999999999998666 36689999999999999985 89999876654321 11
Q ss_pred hhc--cCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 636 ARK--VEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 636 ~~~--~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
... +.....+.+ ++.+||.+|+.++|..||++.+++.||||
T Consensus 728 ~~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPlF 770 (903)
T KOG1027|consen 728 GNYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNHPLF 770 (903)
T ss_pred CccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence 111 111111222 89999999999999999999999999976
No 390
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.4e-31 Score=280.78 Aligned_cols=261 Identities=21% Similarity=0.333 Sum_probs=192.2
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhh--cCCCceeeecccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKT--LVHHHIVRLWDTF 476 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~--L~HpnIV~L~~~f 476 (683)
..+..+..+.+.||+|.||+||+| ...|..||||+|.... ...+.||.+|... |+|+||+.++++-
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG--~wrGe~VAVKiF~srd----------E~SWfrEtEIYqTvmLRHENILgFIaaD 274 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRG--RWRGEDVAVKIFSSRD----------ERSWFRETEIYQTVMLRHENILGFIAAD 274 (513)
T ss_pred HhhhheeEEEEEecCccccceeec--cccCCceEEEEecccc----------hhhhhhHHHHHHHHHhccchhhhhhhcc
Confidence 456778899999999999999999 6789999999984321 2356677777765 4999999999875
Q ss_pred ccCCc---eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhc------CCceEecccCCcceEeCCCC
Q 005678 477 EIDQN---TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKR------AQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 477 ~~d~~---~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~------g~~IIHrDLKP~NILLd~~g 547 (683)
-.+.+ .++||++|.+.|+|+++|.++ .++......++.-+++||++||.. .+.|.|||||+.|||+..+|
T Consensus 275 ~~~~gs~TQLwLvTdYHe~GSL~DyL~r~-tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~ 353 (513)
T KOG2052|consen 275 NKDNGSWTQLWLVTDYHEHGSLYDYLNRN-TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 353 (513)
T ss_pred ccCCCceEEEEEeeecccCCcHHHHHhhc-cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC
Confidence 44443 588999999999999999985 589999999999999999999964 23599999999999999999
Q ss_pred cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCC--CCC-chhHHHHHHHHHHHHHc----------C
Q 005678 548 VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTP--LIS-SKVDVWSAGILFYQMLF----------G 614 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~--~~s-~ksDVWSLGvILyELLt----------G 614 (683)
.+.|+|+|||.....+...-. ......+||.+|||||++...-.. .-+ ..+||||||+++||++. -
T Consensus 354 ~C~IADLGLAv~h~~~t~~id-i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 354 TCCIADLGLAVRHDSDTDTID-IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred cEEEeeceeeEEecccCCccc-CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 999999999987765532222 234456999999999998644321 112 24799999999999984 2
Q ss_pred CCCCCCCchHHHHHH-HHHHHHhh--ccCCCCCcC---CCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 615 RRPFGHDQTQERILR-EDTIIKAR--KVEFPSRPA---VSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 615 ~~PF~~~~~~e~il~-~~~i~~~~--~~~~p~~~~---~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
.+||....+.+.-+. -..+.-.. .+..|.... +-..+..+++-||..||.-|.|+..+-
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 567754322211111 01111111 122222111 123567889999999999999986653
No 391
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2e-30 Score=299.91 Aligned_cols=258 Identities=28% Similarity=0.410 Sum_probs=205.0
Q ss_pred cccccccceeEEEEecccCceEEEEEEEc----c---CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCc
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDL----V---EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHH 468 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~----~---~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~Hpn 468 (683)
.|++..+...+.+.||+|.||.||+|... . ....||||.+...... ...+.+..|+.+|+.+ .|||
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~------~~~~~~~~El~~m~~~g~H~n 363 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS------SEKKDLMSELNVLKELGKHPN 363 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc------HHHHHHHHHHHHHHHhcCCcc
Confidence 56677777778889999999999999632 1 2567999987655432 2256789999999999 5999
Q ss_pred eeeeccccccCCceEEEEEecccCCChhHHHhcCC----------------CcchHHHHHHHHHHHHHHHHHHhcCCceE
Q 005678 469 IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATP----------------VLPEREARIIIVQIFQGLIYLNKRAQKII 532 (683)
Q Consensus 469 IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~----------------~Lse~~~~~I~~qIa~aL~yLH~~g~~II 532 (683)
||.+++++. ..+.+++|+||+..|+|..+|+... .++......++.||+.|+.||++.. +|
T Consensus 364 iv~llG~~t-~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~v 440 (609)
T KOG0200|consen 364 IVNLLGACT-QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP--CV 440 (609)
T ss_pred hhhheeeec-cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC--cc
Confidence 999999986 4788999999999999999996554 4889999999999999999999854 99
Q ss_pred ecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCC--CccCCcccccccCCCCCCchhHHHHHHHHHHH
Q 005678 533 HYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGT--YWYLPPECFELSKTPLISSKVDVWSAGILFYQ 610 (683)
Q Consensus 533 HrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT--~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyE 610 (683)
||||-..|||+..+..+||+|||+|+....... .......|+ ..|||||++.... |+.++|||||||+|||
T Consensus 441 HRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~----y~~~~~~~~LP~kWmApEsl~~~~---ft~kSDVWSfGI~L~E 513 (609)
T KOG0200|consen 441 HRDLAARNVLITKNKVIKIADFGLARDHYNKDY----YRTKSSAGTLPVKWMAPESLFDRV---FTSKSDVWSFGILLWE 513 (609)
T ss_pred chhhhhhhEEecCCCEEEEccccceeccCCCCc----eEecCCCCccceeecCHHHhccCc---ccccchhhHHHHHHHH
Confidence 999999999999999999999999986544311 111222332 2399999997644 9999999999999999
Q ss_pred HHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 611 MLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 611 LLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
|++ |..||........++. .+....... .+..+++++.++++.||..+|.+||++.++..
T Consensus 514 ifsLG~~PYp~~~~~~~l~~--~l~~G~r~~--~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 514 IFTLGGTPYPGIPPTEELLE--FLKEGNRME--QPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HhhCCCCCCCCCCcHHHHHH--HHhcCCCCC--CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 997 8999987543333332 233333333 33568999999999999999999999988864
No 392
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-31 Score=274.22 Aligned_cols=260 Identities=26% Similarity=0.359 Sum_probs=205.1
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
....||.-+..+|.|.- .|..+.|...+++||+|........ ...-+.+.+|..++..+.|+||+.++.+|...
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-----~~~akra~rel~l~~~v~~~nii~l~n~ftP~ 87 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-----QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQ 87 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-----CccchhhhhhhhhhhhhcccceeeeeeccCcc
Confidence 34568999999999998 8889999999999999987555322 22345678999999999999999999999643
Q ss_pred C-----ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEec
Q 005678 480 Q-----NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDF 554 (683)
Q Consensus 480 ~-----~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DF 554 (683)
. ..+|+||||| ..+|...+.. .+.-..+..|+.|++.|+.|||+.+ |+||||||+||++..++.+||.||
T Consensus 88 ~~l~~~~e~y~v~e~m-~~nl~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~~~~lKi~df 162 (369)
T KOG0665|consen 88 KTLEEFQEVYLVMELM-DANLCQVILM--ELDHETISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNSDCTLKILDF 162 (369)
T ss_pred ccHHHHHhHHHHHHhh-hhHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcc--eeecccCcccceecchhheeeccc
Confidence 2 3588999999 5688888763 3677888999999999999999966 999999999999999999999999
Q ss_pred CCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH-
Q 005678 555 GLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI- 633 (683)
Q Consensus 555 Gls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i- 633 (683)
|+++....+ ...+..+.|..|.|||++.+.. |...+||||+|||+.||++|+..|.+..-.+.+......
T Consensus 163 g~ar~e~~~------~~mtpyVvtRyyrapevil~~~---~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~l 233 (369)
T KOG0665|consen 163 GLARTEDTD------FMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQL 233 (369)
T ss_pred hhhcccCcc------cccCchhheeeccCchheeccC---CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHh
Confidence 999865432 1234458999999999998665 899999999999999999999998765444433211000
Q ss_pred --------------------------HHhhccCCCCC---------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 634 --------------------------IKARKVEFPSR---------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 634 --------------------------~~~~~~~~p~~---------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
.....-.||+. +.-+..+.+++.+||-.||++|.|+.++|+||||
T Consensus 234 gtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~ 313 (369)
T KOG0665|consen 234 GTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI 313 (369)
T ss_pred cCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence 00000112221 1234568899999999999999999999999999
Q ss_pred C
Q 005678 679 T 679 (683)
Q Consensus 679 ~ 679 (683)
+
T Consensus 314 ~ 314 (369)
T KOG0665|consen 314 K 314 (369)
T ss_pred e
Confidence 6
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-32 Score=275.06 Aligned_cols=262 Identities=23% Similarity=0.376 Sum_probs=203.0
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC----
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ---- 480 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~---- 480 (683)
..-.+.||-|+||.||.+.|..+|+.||+|.+..- .......+.+.+|+.++..++|.|++.++++.+...
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-----fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfF 129 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-----FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFF 129 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchH-----HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHH
Confidence 33457799999999999999999999999976321 112233567899999999999999999988875221
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..+|+|+|+| ..+|+.+|-....++...+..+++||+.||+|||+.+ |.||||||.|+|+++|..+||||||+++..
T Consensus 130 qEiYV~TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~--ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 130 QELYVLTELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTAN--ILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHHHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcc--hhhccCCCccEEeccCceEEeccccccccc
Confidence 1367889999 6799999988888999999999999999999999965 999999999999999999999999999987
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH-------
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTI------- 633 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i------- 633 (683)
..+.. ..| .+-+.|-+|.|||.+.+.. .|+..+||||+|||+.|+|..+..|-.....+.+.-...+
T Consensus 207 e~d~~-~hM---TqEVVTQYYRAPEiLMGaR--hYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~E 280 (449)
T KOG0664|consen 207 DQRDR-LNM---THEVVTQYYRAPELLMGAR--RYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQE 280 (449)
T ss_pred chhhh-hhh---HHHHHHHHhccHHHhhcch--hhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHH
Confidence 65432 222 2336788899999987544 5999999999999999999888888655554433211000
Q ss_pred ------------HHhhccCCCCC---------cCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 634 ------------IKARKVEFPSR---------PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 634 ------------~~~~~~~~p~~---------~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
+.......|+. ..-..+...++..+|..+|++|.++.+++.|+|+-.
T Consensus 281 aMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 281 AMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 00111112211 122346788899999999999999999999999753
No 394
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=280.97 Aligned_cols=250 Identities=25% Similarity=0.327 Sum_probs=185.0
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhh--cCCCceeeecccccc---
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKT--LVHHHIVRLWDTFEI--- 478 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~--L~HpnIV~L~~~f~~--- 478 (683)
...++++||+|.||.||+| ...++.||||++.. .. ...+..|.+|.+. ++|+||++++++-..
T Consensus 211 pl~l~eli~~Grfg~V~Ka--qL~~~~VAVKifp~------~~----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~ 278 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKA--QLDNRLVAVKIFPE------QE----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA 278 (534)
T ss_pred chhhHHHhhcCccceeehh--hccCceeEEEecCH------HH----HHHHHhHHHHHhccCccchhHHHhhchhccCCc
Confidence 4567789999999999999 46779999999833 22 3456777777765 589999999977542
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhc-------CCceEecccCCcceEeCCCCcEEE
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKR-------AQKIIHYDLKPGNVLFDEFGVAKV 551 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~-------g~~IIHrDLKP~NILLd~~g~vKL 551 (683)
+...+.||++|.+.|+|.++|+.+ .++|.+...|+.-|+.||+|||+. .++|+|||||..|||+.+++.+.|
T Consensus 279 ~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI 357 (534)
T KOG3653|consen 279 DRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI 357 (534)
T ss_pred cccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence 123688999999999999999988 499999999999999999999974 246999999999999999999999
Q ss_pred EecCCccccccCcCCCcccccccCCCCCccCCcccccccCCC---CCCchhHHHHHHHHHHHHHcCCC------------
Q 005678 552 TDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTP---LISSKVDVWSAGILFYQMLFGRR------------ 616 (683)
Q Consensus 552 ~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~---~~s~ksDVWSLGvILyELLtG~~------------ 616 (683)
+|||+|..+...... .-+...+||.+|||||++.+.-.- .--..+||||+|.+||||++...
T Consensus 358 aDFGLAl~~~p~~~~---~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yql 434 (534)
T KOG3653|consen 358 ADFGLALRLEPGKPQ---GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQL 434 (534)
T ss_pred eccceeEEecCCCCC---cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccC
Confidence 999999888643211 112225899999999998653321 11135899999999999997433
Q ss_pred CCC----CCchHHHHHHHHHHHHhhccCCCCCc---CCCHHHHHHHHHhcccCCCCCCCHH
Q 005678 617 PFG----HDQTQERILREDTIIKARKVEFPSRP---AVSNEAKDLIRRCLTYNQAERPDVL 670 (683)
Q Consensus 617 PF~----~~~~~e~il~~~~i~~~~~~~~p~~~---~~s~el~dLI~rCL~~dP~kRPS~~ 670 (683)
||. .....+.. ....+....++.+|+.. .-...+.+.|..||..||+-|.|+.
T Consensus 435 pfe~evG~hPt~e~m-q~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 435 PFEAEVGNHPTLEEM-QELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred chhHHhcCCCCHHHH-HHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 231 11111111 11122233344454321 2234678999999999999999964
No 395
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=293.63 Aligned_cols=249 Identities=23% Similarity=0.317 Sum_probs=202.0
Q ss_pred ceeEEEEecccCceEEEEEEEccCCe----EEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccC
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHR----YVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEID 479 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~----~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d 479 (683)
.....+.||.|+||+||+|...-.|. +||||++....... ...+++.|+-+|.+|+|||+++|++++..+
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~------~s~e~LdeAl~masldHpnl~RLLgvc~~s 770 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPK------ASIELLDEALRMASLDHPNLLRLLGVCMLS 770 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCch------hhHHHHHHHHHHhcCCCchHHHHhhhcccc
Confidence 34556889999999999998765554 68899875543322 235789999999999999999999999743
Q ss_pred CceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
.+.||++||++|+|.++++.+ ..+..+....|+.||++||.|||.. .+|||||-..|||+.+...+||+|||+++
T Consensus 771 --~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q--rlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 771 --TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ--RLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred --hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc--chhhhhhhhhheeecCCCeEEEEecchhh
Confidence 477999999999999999655 5688999999999999999999985 59999999999999999999999999999
Q ss_pred ccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhh
Q 005678 559 IVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKAR 637 (683)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~ 637 (683)
.+..+... ..+..+.-.+-|||-|++.... |+.++|||||||++||++| |..|+......+.- +.+...
T Consensus 847 ll~~d~~e---y~~~~gK~pikwmale~i~~~~---~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~---dlle~g- 916 (1177)
T KOG1025|consen 847 LLAPDEKE---YSAPGGKVPIKWMALESIRIRK---YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP---DLLEKG- 916 (1177)
T ss_pred ccCccccc---ccccccccCcHHHHHHHhhccC---CCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh---HHHhcc-
Confidence 88765322 1222333445699999987555 9999999999999999997 99999776654311 112222
Q ss_pred ccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 638 KVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 638 ~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
.+++.+|.++-++.-++.+||..|+..||.+.++.
T Consensus 917 -eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 917 -ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred -ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence 34677789999999999999999999999998875
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=9.6e-32 Score=297.41 Aligned_cols=264 Identities=23% Similarity=0.372 Sum_probs=221.4
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
..+.|.++..+|.|.||.||+++|+.++...|+|++++..... +..+..|+-+++..+|||||.+++.|- -.
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd-------~~~iqqei~~~~dc~h~nivay~gsyl-r~ 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-------FSGIQQEIGMLRDCRHPNIVAYFGSYL-RR 84 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc-------ccccccceeeeecCCCcChHHHHhhhh-hh
Confidence 3568999999999999999999999999999999987764322 345677999999999999999999995 66
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
..+++.||||.||+|.+.-.-.+++++.++..++++.+.||+|||+.| -+|||||-.|||+++.|.+|++|||.+-.+
T Consensus 85 dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd~gDvklaDfgvsaqi 162 (829)
T KOG0576|consen 85 DKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTDEGDVKLADFGVSAQI 162 (829)
T ss_pred cCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC--cccccccccceeecccCceeecccCchhhh
Confidence 778999999999999999998999999999999999999999999865 899999999999999999999999998766
Q ss_pred ccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccC
Q 005678 561 EDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVE 640 (683)
Q Consensus 561 ~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~ 640 (683)
... +.......|||+|||||+......+.|...+|||++|++..|+---++|..........+- -..-....+.
T Consensus 163 tat-----i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L-mTkS~~qpp~ 236 (829)
T KOG0576|consen 163 TAT-----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL-MTKSGFQPPT 236 (829)
T ss_pred hhh-----hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH-hhccCCCCCc
Confidence 433 2334556899999999998777767799999999999999999888877544444332211 1111122334
Q ss_pred CCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 641 FPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 641 ~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
..++...++-+.+|++.||..+|++||+++.++.|||++.
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 4456678999999999999999999999999999999874
No 397
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=255.92 Aligned_cols=216 Identities=25% Similarity=0.353 Sum_probs=177.9
Q ss_pred ccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTF 476 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f 476 (683)
|++..+...-+..||+|+||.|-+.++..+|...|+|.+.......+ .+..++|+.+..+. ..|.+|.+||.+
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~------q~r~L~dldi~~r~~~CPf~V~FyGa~ 114 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQE------QKRLLMDLDIIMRTVDCPFTVHFYGAL 114 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHH------HHHHHHhhhhhccCCCCCeEEEeehhh
Confidence 55666666677889999999999999999999999998866544222 35677888877665 699999999998
Q ss_pred ccCCceEEEEEecccCCChhHHH----hcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEE
Q 005678 477 EIDQNTFCTVLEYCSGKDLDAVL----KATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVT 552 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~ggsL~~~L----~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~ 552 (683)
. .....+|.||.| ..+|+.+. +.++.+++..+-.|+.-++.||.|||+. ..|||||+||+|||++.+|.+|||
T Consensus 115 ~-regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLIn~~GqVKiC 191 (282)
T KOG0984|consen 115 F-REGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILINYDGQVKIC 191 (282)
T ss_pred h-ccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEEccCCcEEEc
Confidence 6 566788999999 56887654 6678899999999999999999999996 479999999999999999999999
Q ss_pred ecCCccccccCcCCCcccccccCCCCCccCCcccccccCCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHH
Q 005678 553 DFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTP-LISSKVDVWSAGILFYQMLFGRRPFGHDQTQERIL 628 (683)
Q Consensus 553 DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~-~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il 628 (683)
|||+|..+.+.... +..+|...|||||.+...... .|+-++||||||++++||.+++.||..-.+....+
T Consensus 192 DFGIsG~L~dSiAk------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qL 262 (282)
T KOG0984|consen 192 DFGISGYLVDSIAK------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQL 262 (282)
T ss_pred ccccceeehhhhHH------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHH
Confidence 99999887654322 123788889999998765433 69999999999999999999999997665554433
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=5.7e-29 Score=240.36 Aligned_cols=213 Identities=40% Similarity=0.640 Sum_probs=182.7
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecc
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYC 490 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~ 490 (683)
||.|+||.||++.+..++..+++|++....... ....+.+|+.+++.+.|++|+++++++. .....++++||+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~~~~e~~ 73 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------LLEELLREIEILKKLNHPNIVKLYGVFE-DENHLYLVMEYC 73 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------HHHHHHHHHHHHHhcCCCCeeeEeeeee-cCCeEEEEEecC
Confidence 689999999999988889999999986543221 2457889999999999999999999986 457899999999
Q ss_pred cCCChhHHHhcC-CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-CCcEEEEecCCccccccCcCCCc
Q 005678 491 SGKDLDAVLKAT-PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-FGVAKVTDFGLSKIVEDDVGSQG 568 (683)
Q Consensus 491 ~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-~g~vKL~DFGls~~~~~~~~~~~ 568 (683)
+|++|..++... ..+++..+..++.+++.+|.|||..+ ++|+||+|.||+++. ++.++|+|||.+........
T Consensus 74 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--- 148 (215)
T cd00180 74 EGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--- 148 (215)
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---
Confidence 999999999765 46899999999999999999999965 999999999999998 89999999999986654321
Q ss_pred ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCC
Q 005678 569 MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVS 648 (683)
Q Consensus 569 ~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s 648 (683)
......+...|++||.+... ..++.+.|+|++|+++|+|
T Consensus 149 --~~~~~~~~~~~~~pe~~~~~--~~~~~~~D~~~lg~~~~~l------------------------------------- 187 (215)
T cd00180 149 --LLKTIVGTPAYMAPEVLLGK--GYYSEKSDIWSLGVILYEL------------------------------------- 187 (215)
T ss_pred --hhhcccCCCCccChhHhccc--CCCCchhhhHHHHHHHHHH-------------------------------------
Confidence 12223678889999988644 2478899999999999999
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 005678 649 NEAKDLIRRCLTYNQAERPDVLTLAQDP 676 (683)
Q Consensus 649 ~el~dLI~rCL~~dP~kRPS~~eLl~hP 676 (683)
..+.+++.+|+..+|.+||++.++++++
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 4788999999999999999999999875
No 399
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=1.6e-30 Score=276.92 Aligned_cols=267 Identities=25% Similarity=0.457 Sum_probs=203.6
Q ss_pred ccccccceeEEEEecccCceEEEEEEEcc---CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeec
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLV---EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLW 473 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~---~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~ 473 (683)
++.+.+.|..++.||.|.|++||++.+.. ..++||+|.+..... ...+..|+.+|..+ .+.||+++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~---------p~ri~~El~~L~~~gG~~ni~~~~ 101 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS---------PSRILNELEMLYRLGGSDNIIKLN 101 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC---------chHHHHHHHHHHHhccchhhhcch
Confidence 34566778999999999999999999887 789999998766543 23577899999999 589999999
Q ss_pred cccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC-CCCcEEEE
Q 005678 474 DTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD-EFGVAKVT 552 (683)
Q Consensus 474 ~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd-~~g~vKL~ 552 (683)
+++. .++..++||||++..+..+++.. ++..+++.++..++.||.++|..| ||||||||+|+|++ ..+.-.|+
T Consensus 102 ~~~r-nnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~~t~rg~Lv 175 (418)
T KOG1167|consen 102 GCFR-NNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNRRTQRGVLV 175 (418)
T ss_pred hhhc-cCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccC--ccccCCCccccccccccCCceEE
Confidence 9986 67889999999999988888764 678999999999999999999966 99999999999998 46788999
Q ss_pred ecCCccccccCc-----------------CC-------------Ccc---------cccccCCCCCccCCcccccccCCC
Q 005678 553 DFGLSKIVEDDV-----------------GS-------------QGM---------ELTSQGAGTYWYLPPECFELSKTP 593 (683)
Q Consensus 553 DFGls~~~~~~~-----------------~~-------------~~~---------~l~~~~~GT~~Y~APE~~~~~~~~ 593 (683)
|||++....... +. .+. ...-..+||++|.|||++. +.+
T Consensus 176 DFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~--k~~ 253 (418)
T KOG1167|consen 176 DFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLF--RCP 253 (418)
T ss_pred echhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHh--hcc
Confidence 999997221110 00 000 0011237999999999986 445
Q ss_pred CCCchhHHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHHHh----------hc------c----------CC-----
Q 005678 594 LISSKVDVWSAGILFYQMLFGRRPFGHDQTQE-RILREDTIIKA----------RK------V----------EF----- 641 (683)
Q Consensus 594 ~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e-~il~~~~i~~~----------~~------~----------~~----- 641 (683)
..++++||||.|||++.++++++||......- .+...-.+... +. . .|
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~ 333 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHI 333 (418)
T ss_pred CcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccCh
Confidence 57899999999999999999999985433222 22111111000 00 0 00
Q ss_pred ----C----------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 642 ----P----------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 642 ----p----------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
+ .....+..+.+|+.+||+.||.+|.+++++|+||||.-+
T Consensus 334 ~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 334 ESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred hhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 0 012234578999999999999999999999999999854
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1e-27 Score=237.38 Aligned_cols=201 Identities=37% Similarity=0.619 Sum_probs=171.6
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
|.+.+.||.|+||.||+|.+..++..||+|.+...... .....+.+|+..+..++|+|++++++.+. .....+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-~~~~~~ 73 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE------KQREEFLREIRILKKLKHPNIVKLYGVFE-DPEPLY 73 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch------HHHHHHHHHHHHHHhCCCCChhhheeeee-cCCceE
Confidence 56789999999999999998888999999998654322 23567888999999999999999999875 567889
Q ss_pred EEEecccCCChhHHHhcCCC-cchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 485 TVLEYCSGKDLDAVLKATPV-LPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~~~-Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
+++||+++++|.+++..... +++..+..++.+++.+|.|||..+ ++|+||+|.||+++.++.++|+|||++......
T Consensus 74 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 74 LVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred EEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence 99999999999999987666 899999999999999999999865 999999999999999999999999999877544
Q ss_pred cCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 005678 564 VGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGH 620 (683)
Q Consensus 564 ~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~ 620 (683)
... ......++..|++||.+. ....++.++|||+||+++|+|++|+.||..
T Consensus 152 ~~~----~~~~~~~~~~~~~pe~~~--~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 152 LAA----LLKTVKGTPFYLAPEVLL--GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccc----cccceeccCCcCCHhHhc--CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 210 122336788999999885 334477899999999999999999999966
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=6e-29 Score=271.63 Aligned_cols=202 Identities=30% Similarity=0.481 Sum_probs=172.6
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcc----cchhhHHHHHHHHHHHHHHHhhcC---CCceeeecccc
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQ----WSEDKKQSYIRHAIREYNIHKTLV---HHHIVRLWDTF 476 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~----~~~~~~~~~i~~~~rEi~il~~L~---HpnIV~L~~~f 476 (683)
.|.+++.||.|+||.|++|.++.+...|+||.+.+... |.++.+ +-.+-.|+.||..|+ |+||++++++|
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrk---LGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRK---LGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccc---cCccchhHHHHHHhhhcCccchhhhhhee
Confidence 48999999999999999999999999999998755432 222111 223556999999997 99999999999
Q ss_pred ccCCceEEEEEeccc-CCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 477 EIDQNTFCTVLEYCS-GKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~-ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
+ +.+++||+||-.. |.+|.++|..++.+++.++..|+.||+.|+++||+.| |||||||-+||.++.+|.+||+|||
T Consensus 639 E-ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~--ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 639 E-DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred e-cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccC--ceecccccccEEEecCCeEEEeecc
Confidence 7 7889999999764 5699999999999999999999999999999999966 9999999999999999999999999
Q ss_pred CccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 005678 556 LSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGH 620 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~ 620 (683)
.+-..... .....+||..|.|||++.+.+. ....-|||++|++||.+++...||..
T Consensus 716 saa~~ksg-------pfd~f~gtv~~aapevl~g~~y--~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 716 SAAYTKSG-------PFDVFVGTVDYAAPEVLGGEKY--LGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred chhhhcCC-------CcceeeeeccccchhhhCCCcc--CCCcchhhhhhheeeEEEeccCCCcC
Confidence 98776543 2344589999999999876553 46678999999999999999999853
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=3.1e-28 Score=289.99 Aligned_cols=205 Identities=18% Similarity=0.190 Sum_probs=145.0
Q ss_pred hcCC-Cceeeecccccc------CCceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEec
Q 005678 463 TLVH-HHIVRLWDTFEI------DQNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHY 534 (683)
Q Consensus 463 ~L~H-pnIV~L~~~f~~------d~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHr 534 (683)
.+.| +||+.+++.|.. ....+++++||+ +++|..+|.. ...+++..+..|+.||+.||.|||+.+ ||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG--IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC--eeec
Confidence 4456 588888887732 234678889988 6699999964 456999999999999999999999865 9999
Q ss_pred ccCCcceEeCCCCcE-------------------EEEecCCccccccCcC-----------CCcccccccCCCCCccCCc
Q 005678 535 DLKPGNVLFDEFGVA-------------------KVTDFGLSKIVEDDVG-----------SQGMELTSQGAGTYWYLPP 584 (683)
Q Consensus 535 DLKP~NILLd~~g~v-------------------KL~DFGls~~~~~~~~-----------~~~~~l~~~~~GT~~Y~AP 584 (683)
||||+||||+..|.+ ||+|||+++....... ..........+||++||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 999999999655544 4555555543211000 0000001124689999999
Q ss_pred ccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCC
Q 005678 585 ECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQA 664 (683)
Q Consensus 585 E~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~ 664 (683)
|++.... |+.++|||||||+||||++|.+||.........+. .. ...+........+..++.+||.++|.
T Consensus 185 E~~~~~~---~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~L~~~P~ 254 (793)
T PLN00181 185 EEDNGSS---SNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLR------HR-VLPPQILLNWPKEASFCLWLLHPEPS 254 (793)
T ss_pred hhhccCC---CCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHH------Hh-hcChhhhhcCHHHHHHHHHhCCCChh
Confidence 9986544 89999999999999999999988753221111110 00 11111112345677999999999999
Q ss_pred CCCCHHHHhcCcccCC
Q 005678 665 ERPDVLTLAQDPYLTY 680 (683)
Q Consensus 665 kRPS~~eLl~hP~l~~ 680 (683)
+||++.++++||||..
T Consensus 255 ~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 255 CRPSMSELLQSEFINE 270 (793)
T ss_pred hCcChHHHhhchhhhh
Confidence 9999999999999975
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=8.1e-28 Score=243.70 Aligned_cols=258 Identities=21% Similarity=0.373 Sum_probs=196.7
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEID 479 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d 479 (683)
+.+.|.+.+.||+|.||.+-+|.++.+...+++|.+... ...++.|.+|...--.|. |.||+.-|++....
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p--------~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt 93 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP--------QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT 93 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc--------hhhHHHHHHHhccceeeccchhhhHHHHHHhhc
Confidence 567899999999999999999999999999999987543 234678899988877774 89999999875556
Q ss_pred CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC--CCCcEEEEecCCc
Q 005678 480 QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD--EFGVAKVTDFGLS 557 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd--~~g~vKL~DFGls 557 (683)
.+.+++++||+|.|+|..-+...+ +.+.....++.|+++||.|+|+. ++||||||.+||||- +.-.+||||||+.
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsk--nlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSK--NLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred CceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhcc--chhhcccccceEEEecCCccEEEeeecccc
Confidence 778889999999999999987765 89999999999999999999985 599999999999995 3458999999999
Q ss_pred cccccCcCCCcccccccCCCCCccCCcccccccCCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCchHHH-HHHHHHHH
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTP--LISSKVDVWSAGILFYQMLFGRRPFGHDQTQER-ILREDTII 634 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~--~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~-il~~~~i~ 634 (683)
+....... ..--+..|.|||.......+ ...+.+|||.||+|+|.||+|..||-.....+. ........
T Consensus 171 ~k~g~tV~--------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~ 242 (378)
T KOG1345|consen 171 RKVGTTVK--------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWL 242 (378)
T ss_pred cccCceeh--------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHh
Confidence 86543211 11234559999987654433 246678999999999999999999964332222 22211222
Q ss_pred HhhccCCCCC-cCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCcc
Q 005678 635 KARKVEFPSR-PAVSNEAKDLIRRCLTYNQAER---PDVLTLAQDPY 677 (683)
Q Consensus 635 ~~~~~~~p~~-~~~s~el~dLI~rCL~~dP~kR---PS~~eLl~hP~ 677 (683)
.......|.. ..+++.+..+.++-|..+|.+| .++.......|
T Consensus 243 ~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 243 KRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred cccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 2222233332 3578899999999999999999 44444444444
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=2.6e-26 Score=222.16 Aligned_cols=163 Identities=21% Similarity=0.267 Sum_probs=126.7
Q ss_pred CChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccc
Q 005678 493 KDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMEL 571 (683)
Q Consensus 493 gsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l 571 (683)
|+|.+++.. ...+++..++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~~~~~~~--fG~~~~~~~~~------- 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTWDGLLKL--DGSVAFKTPEQ------- 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcCccceee--ccceEeecccc-------
Confidence 689999975 456999999999999999999999854 999999999999999 99998764321
Q ss_pred cccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC---CCCcCCC
Q 005678 572 TSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF---PSRPAVS 648 (683)
Q Consensus 572 ~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~---p~~~~~s 648 (683)
..||+.|+|||++.... ++.++|||||||++|+|++|..||.........+... +........ +....++
T Consensus 64 ---~~g~~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 136 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQS---YTEKADIYSLGITLYEALDYELPYNEERELSAILEIL-LNGMPADDPRDRSNLESVS 136 (176)
T ss_pred ---CCCcccccChHHhcCCC---CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHH-HHHhccCCccccccHHHHH
Confidence 26899999999986544 8899999999999999999999997654433222211 111111100 1112233
Q ss_pred H--HHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 649 N--EAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 649 ~--el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
. .+.+||.+||..+|.+||++.+++.|+|+.
T Consensus 137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 137 AARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 3 699999999999999999999999999975
No 405
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93 E-value=3.6e-26 Score=240.79 Aligned_cols=257 Identities=19% Similarity=0.237 Sum_probs=199.4
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeE-----EEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeec
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRY-----VACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLW 473 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~-----VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~ 473 (683)
.+-..|+++.-++-+|.||.||.|+......+ |.+|.++.. ..+-.+..++.|.-.+..+.|||++.+.
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~------AS~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH------ASQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc------ccHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 34456677888899999999999976655443 445543221 1223355678888889999999999999
Q ss_pred cccccCCceEEEEEecccCCChhHHHhcC--------CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC
Q 005678 474 DTFEIDQNTFCTVLEYCSGKDLDAVLKAT--------PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE 545 (683)
Q Consensus 474 ~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~--------~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~ 545 (683)
+++..+...++++|.++.-|+|..+|.-. ..++-.+...++.|++.|+.|||.++ |||.||-..|.+|++
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDD 431 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehh
Confidence 99877888899999999889999999511 34677788889999999999999976 999999999999999
Q ss_pred CCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchH
Q 005678 546 FGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQ 624 (683)
Q Consensus 546 ~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~ 624 (683)
...+||+|=.+++.+...... .+...-.....||+||.+.... |+..+|||||||+||||+| |+.|+..-++.
T Consensus 432 ~LqVkltDsaLSRDLFP~DYh---cLGDnEnRPvkWMslEal~n~~---yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYH---CLGDNENRPVKWMSLEALQNSH---YSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred heeEEeccchhccccCccccc---ccCCCCCCcccccCHHHHhhhh---hcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 999999999999865433211 1111112234599999987554 9999999999999999997 99999887776
Q ss_pred HHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 625 ERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 625 e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
+... .+... .+...+-.||+++..++.-||...|++||++.++..
T Consensus 506 Em~~---ylkdG--yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 506 EMEH---YLKDG--YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHH---HHhcc--ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 6442 22222 333344579999999999999999999999999864
No 406
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=2.6e-24 Score=217.64 Aligned_cols=263 Identities=35% Similarity=0.551 Sum_probs=202.8
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCC-ceeeeccccccCCceE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHH-HIVRLWDTFEIDQNTF 483 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hp-nIV~L~~~f~~d~~~~ 483 (683)
|.+...||.|+||.||++.+. ..+++|.+........ .....+.+|+.++..+.|+ +|+++++.+. .....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~----~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKS----KEVERFLREIQILASLNHPPNIVKLYDFFQ-DEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccch----hHHHHHHHHHHHHHHccCCcceeeEEEEEe-cCCEE
Confidence 778899999999999999876 7889998765543322 2456789999999999988 7999999994 56668
Q ss_pred EEEEecccCCChhHHHhcCC---CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC-cEEEEecCCccc
Q 005678 484 CTVLEYCSGKDLDAVLKATP---VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG-VAKVTDFGLSKI 559 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~---~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g-~vKL~DFGls~~ 559 (683)
+++++|+.+++|..++.... .++......++.+++.++.|+|..+ ++||||||.|||++..+ .++++|||++..
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~~~~~~~l~dfg~~~~ 151 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDRDGRVVKLIDFGLAKL 151 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecCCCCeEEEeccCccee
Confidence 99999999999997777664 6999999999999999999999966 99999999999999888 799999999986
Q ss_pred cccCcCCCcc-cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCch---HHHHHHHHHHHH
Q 005678 560 VEDDVGSQGM-ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQT---QERILREDTIIK 635 (683)
Q Consensus 560 ~~~~~~~~~~-~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~---~e~il~~~~i~~ 635 (683)
.......... .......||.+|++||.+.......++...|+||+|++++++++|..||..... ...... ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~ 228 (384)
T COG0515 152 LPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK---IIL 228 (384)
T ss_pred cCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHH---HHH
Confidence 5543221111 134556899999999988652112378899999999999999999999876653 222211 111
Q ss_pred hhcc---CCCCCcCC----CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 636 ARKV---EFPSRPAV----SNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 636 ~~~~---~~p~~~~~----s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.... ..+..... ...+.+++.+|+..+|..|.+......++|...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 280 (384)
T COG0515 229 ELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH 280 (384)
T ss_pred hcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence 1111 11111111 257899999999999999999998888766543
No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=4.5e-26 Score=262.07 Aligned_cols=268 Identities=23% Similarity=0.362 Sum_probs=203.6
Q ss_pred eEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEE
Q 005678 406 ALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 406 ~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~L 485 (683)
....++|.|.||.|+.+........++.|.+... ..+......+...+..|+.+-..+.|||++..+..+..-...+ .
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~-~ 398 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGIL-Q 398 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccch-h
Confidence 4567899999998888877777776777755422 1122233344445888999999999999988877775333333 4
Q ss_pred EEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcC
Q 005678 486 VLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVG 565 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~ 565 (683)
+||||++ +|..++...+.++..++..++.|++.|+.|||..| |.||||||+|+|+..+|.+||+|||.+........
T Consensus 399 ~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~G--iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMG--LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcC--ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 4999999 99999998878999999999999999999999976 99999999999999999999999999987654422
Q ss_pred CCcccccccCCCCCccCCcccccccCCCCCC-chhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCC---
Q 005678 566 SQGMELTSQGAGTYWYLPPECFELSKTPLIS-SKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEF--- 641 (683)
Q Consensus 566 ~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s-~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~--- 641 (683)
..+......+|+..|+|||.+.... |+ ..+||||.|++++.|.+|+.||......+..+..........+..
T Consensus 476 -~~~~~~~g~~gS~pY~apE~~~~~~---ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~ 551 (601)
T KOG0590|consen 476 -KNIHESSGIVGSDPYLAPEVLTGKE---YDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN 551 (601)
T ss_pred -hhhhhhcCcccCCcCcCcccccccc---cCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH
Confidence 2233455568999999999987555 44 458999999999999999999976554432211000000011111
Q ss_pred CCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 005678 642 PSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYSK 682 (683)
Q Consensus 642 p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~K 682 (683)
+....++...+.+|.+||+++|.+|.++.+|++++||+..+
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 11245788899999999999999999999999999998653
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2.6e-23 Score=222.92 Aligned_cols=256 Identities=21% Similarity=0.238 Sum_probs=189.8
Q ss_pred ceeEEEEecccCceEEEEEEEccCC-eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCC----Cceeeecccccc
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEH-RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVH----HHIVRLWDTFEI 478 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g-~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~H----pnIV~L~~~f~~ 478 (683)
+|.+.+.||+|+||.||.|.+..++ ..+|+|+......... ..+..|+.++..+.. +++..+++.+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-------~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~ 91 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-------SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRS 91 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-------ccchhHHHHHHHHhhhcCCCCCCEEEEeccC
Confidence 8999999999999999999987774 6899998654322111 024457777777762 588888887743
Q ss_pred CCceEEEEEecccCCChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC-----CcEEE
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF-----GVAKV 551 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~-----g~vKL 551 (683)
.....++||+.+ |.+|.++.... +.++..++..|+.|++.+|.+||+.| +|||||||.|+++... -.+.|
T Consensus 92 ~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~~~~~~~~~~~l 168 (322)
T KOG1164|consen 92 TEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQSSRSEVRTLYL 168 (322)
T ss_pred CCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecCCCCcccceEEE
Confidence 566788999999 89999988544 57999999999999999999999977 9999999999999854 36999
Q ss_pred EecCCcc--ccccCcCCC--cccc-cccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHH
Q 005678 552 TDFGLSK--IVEDDVGSQ--GMEL-TSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQER 626 (683)
Q Consensus 552 ~DFGls~--~~~~~~~~~--~~~l-~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~ 626 (683)
.|||+++ ......+.. .... .....||..|+++.+..... .+.+.|+||++.++.+|+.|..||........
T Consensus 169 lDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e---~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~ 245 (322)
T KOG1164|consen 169 LDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE---QGRRDDLESLFYMLLELLKGSLPWEALEMTDL 245 (322)
T ss_pred EecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc---cCCchhhhhHHHHHHHHhcCCCCCccccccch
Confidence 9999998 332222211 1111 22346999999999876444 78899999999999999999999966554322
Q ss_pred HHHHHHHHHhhccCCC-CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 005678 627 ILREDTIIKARKVEFP-SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 674 (683)
Q Consensus 627 il~~~~i~~~~~~~~p-~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~ 674 (683)
....... ....... .....+..+..+...+-..++..+|++..+..
T Consensus 246 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 246 KSKFEKD--PRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred HHHHHHH--hhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 2211111 1111111 22345678888888888899999999887753
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=3.2e-23 Score=207.52 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=197.0
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCC-Cceeeecccccc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVH-HHIVRLWDTFEI 478 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~H-pnIV~L~~~f~~ 478 (683)
+...+|.+++.||.|+||.+|.|....+|..||||+-...... ..+..|..+...|+| ..|..+..++ .
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h---------pqL~yEskvY~iL~~g~GiP~i~~y~-~ 81 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH---------PQLLYESKVYRILQGGVGIPHIRHYG-T 81 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC---------cchhHHHHHHHHhccCCCCchhhhhc-c
Confidence 4677999999999999999999999999999999986444332 245678888888865 4666665444 4
Q ss_pred CCceEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC---CCCcEEEEec
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD---EFGVAKVTDF 554 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd---~~g~vKL~DF 554 (683)
+..+-.+||+++ |.+|.+++. ....++..++..++.|++.-++|+|.++ +|||||||+|+|.. ....+.|+||
T Consensus 82 e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMGlgrh~~kl~LIDF 158 (341)
T KOG1163|consen 82 EKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMGLGRHCNKLYLIDF 158 (341)
T ss_pred ccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeeccccccceEEEEec
Confidence 778888999999 899999995 4467999999999999999999999965 99999999999986 3457999999
Q ss_pred CCccccccCcCCCcccc--cccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Q 005678 555 GLSKIVEDDVGSQGMEL--TSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDT 632 (683)
Q Consensus 555 Gls~~~~~~~~~~~~~l--~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~ 632 (683)
|+|+...+......+.. ...-.||..|.+--...+- ..+...|+-|+|.+|+++.-|..||-.............
T Consensus 159 GLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~---eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEk 235 (341)
T KOG1163|consen 159 GLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGI---EQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEK 235 (341)
T ss_pred cchhhhccccccccCccccCCccceeeeehhhhhhhhh---hhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHH
Confidence 99998766544433322 3344799999886654322 257889999999999999999999977665544433222
Q ss_pred HHHhhccCCC---CCcCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 005678 633 IIKARKVEFP---SRPAVSNEAKDLIRRCLTYNQAERPDVLTL 672 (683)
Q Consensus 633 i~~~~~~~~p---~~~~~s~el~dLI~rCL~~dP~kRPS~~eL 672 (683)
|. ..+...| -+..+|.++.-.+.-|-..--++-|+..-|
T Consensus 236 I~-EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~yl 277 (341)
T KOG1163|consen 236 IS-EKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYL 277 (341)
T ss_pred HH-HhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHH
Confidence 22 1222222 245788999999999998888888986543
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=2.8e-23 Score=215.79 Aligned_cols=260 Identities=19% Similarity=0.258 Sum_probs=197.6
Q ss_pred cccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccc
Q 005678 397 NFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDT 475 (683)
Q Consensus 397 ~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~ 475 (683)
..-+.+-.|.+.+.||+|+||++|.|.+..++.+||||.-..... ...+..|+...+.|. .++|...|.
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~---------APQLrdEYr~YKlL~g~~GIP~vYY- 91 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE---------APQLRDEYRTYKLLGGTEGIPQVYY- 91 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEeccccCC---------cchHHHHHHHHHHHcCCCCCCceee-
Confidence 445778899999999999999999999999999999998644322 124556777777774 688988884
Q ss_pred cccCCceEEEEEecccCCChhHHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC-----CcE
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLK-ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF-----GVA 549 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~-~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~-----g~v 549 (683)
|..++.+-.||+|++ |.+|.+++. ....|+..++..|+.|++.-+.|+|++. +|.|||||+|+||... ..+
T Consensus 92 FGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGrp~~k~~n~I 168 (449)
T KOG1165|consen 92 FGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGRPGTKDANVI 168 (449)
T ss_pred eccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecCCCCCCCceE
Confidence 445777778999999 899999995 4567999999999999999999999965 9999999999999743 359
Q ss_pred EEEecCCccccccCcCCCccc--ccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH
Q 005678 550 KVTDFGLSKIVEDDVGSQGME--LTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI 627 (683)
Q Consensus 550 KL~DFGls~~~~~~~~~~~~~--l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i 627 (683)
.|+|||+++...+...+..+. -.+...||.+||+--...+ ...|...|+-|||-+|++.|-|..||-.......-
T Consensus 169 hiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG---rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK 245 (449)
T KOG1165|consen 169 HIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG---REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK 245 (449)
T ss_pred EEEeccchhhhcCccccccCccccccccccceeeeEeecccc---chhhhhhhHHHhhhhhhhhccCCCccccccCcchH
Confidence 999999999987766655543 3455689999998765543 33788999999999999999999999654443322
Q ss_pred HHHHHHHHhhccCC--CCCcCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 005678 628 LREDTIIKARKVEF--PSRPAVSNEAKDLIRRCLTYNQAERPDVLTL 672 (683)
Q Consensus 628 l~~~~i~~~~~~~~--p~~~~~s~el~dLI~rCL~~dP~kRPS~~eL 672 (683)
.....|-....... ..+..+|.++...++-.-..+..+-|+++-+
T Consensus 246 ~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdyl 292 (449)
T KOG1165|consen 246 EKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYL 292 (449)
T ss_pred HHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHH
Confidence 22112111111110 0124577788888887777788888886543
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1.1e-23 Score=229.12 Aligned_cols=178 Identities=21% Similarity=0.183 Sum_probs=133.8
Q ss_pred ccccccceeEEEEecccCceEEEEEEEcc-CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceee-eccc
Q 005678 398 FQILNHRYALLNLLGKGGFSEVYKAYDLV-EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVR-LWDT 475 (683)
Q Consensus 398 ~~i~~~ry~l~~~LGkGgfG~Vyka~d~~-~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~-L~~~ 475 (683)
...+.++|.+.+.||+|+||+||+|++.. ++..||||.+.....+.. .......+.+|+.+++.++|+||++ +++
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~--~~~~~~~~~~E~~iL~~L~h~~iv~~l~~- 89 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWS--KPLARHLAAREIRALKTVRGIGVVPQLLA- 89 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccc--cHHHHHHHHHHHHHHHhccCCCCCcEEEE-
Confidence 35677899999999999999999998776 788899998643211101 1123456889999999999999985 443
Q ss_pred cccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEeccc-CCcceEeCCCCcEEEEec
Q 005678 476 FEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDL-KPGNVLFDEFGVAKVTDF 554 (683)
Q Consensus 476 f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDL-KP~NILLd~~g~vKL~DF 554 (683)
+ +..|+|||||+|++|... ... . ...++.+++.||.|||+.+ |+|||| ||+|||++.++.+||+||
T Consensus 90 ~----~~~~LVmE~~~G~~L~~~-~~~---~---~~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 90 T----GKDGLVRGWTEGVPLHLA-RPH---G---DPAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred c----CCcEEEEEccCCCCHHHh-Ccc---c---hHHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcCCCCEEEEEC
Confidence 2 357899999999999732 211 1 1467889999999999965 999999 999999998899999999
Q ss_pred CCccccccCcCCCcc---cccccCCCCCccCCcccccccC
Q 005678 555 GLSKIVEDDVGSQGM---ELTSQGAGTYWYLPPECFELSK 591 (683)
Q Consensus 555 Gls~~~~~~~~~~~~---~l~~~~~GT~~Y~APE~~~~~~ 591 (683)
|+|+.+........+ .-.....|++.|+|||.+....
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 999987654322111 1112447889999999986443
No 412
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.4e-23 Score=233.58 Aligned_cols=240 Identities=28% Similarity=0.376 Sum_probs=196.4
Q ss_pred EecccCceEEEEEEE---ccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCCceEEE
Q 005678 410 LLGKGGFSEVYKAYD---LVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d---~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~~~~~L 485 (683)
.+|.|.||.|+++.. ...+..+|+|+........... .+...|..++..++ ||.+|.++.+|+ .....++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~-----~~t~~er~il~~~~~~~f~v~lhyafq-t~~kl~l 74 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDR-----THTKQERIILAFVHNTPFLVKLHYAFQ-TDGKLYL 74 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccc-----cccccHHHHHhhccCCCceeeeeeeec-cccchhH
Confidence 379999999998742 2346778888875544332221 15566888888887 999999999997 5667889
Q ss_pred EEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcC
Q 005678 486 VLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVG 565 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~ 565 (683)
+++|..||+|...+.....+.+.....+...++.|+.++|+.+ |+|||+|++||+++.+|++++.|||+++..-...
T Consensus 75 ~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~--iiyrd~k~enilld~~Ghi~~tdfglske~v~~~- 151 (612)
T KOG0603|consen 75 ILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLG--IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK- 151 (612)
T ss_pred hhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhH--HHHhcccccceeecccCccccCCchhhhHhHhhh-
Confidence 9999999999999988888999999999999999999999976 9999999999999999999999999998765431
Q ss_pred CCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCc
Q 005678 566 SQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRP 645 (683)
Q Consensus 566 ~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~ 645 (683)
..+||+-|||||++. + .+..+|+||||+++|+|++|..||.. .... ......++.+.
T Consensus 152 --------~~cgt~eymApEI~~--g---h~~a~D~ws~gvl~felltg~~pf~~-~~~~---------~Il~~~~~~p~ 208 (612)
T KOG0603|consen 152 --------IACGTYEYRAPEIIN--G---HLSAADWWSFGVLAFELLTGTLPFGG-DTMK---------RILKAELEMPR 208 (612)
T ss_pred --------hcccchhhhhhHhhh--c---cCCcccchhhhhhHHHHhhCCCCCch-HHHH---------HHhhhccCCch
Confidence 118999999999986 2 57789999999999999999999987 1111 11222445556
Q ss_pred CCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 005678 646 AVSNEAKDLIRRCLTYNQAERPD-----VLTLAQDPYLTYS 681 (683)
Q Consensus 646 ~~s~el~dLI~rCL~~dP~kRPS-----~~eLl~hP~l~~~ 681 (683)
.++..+.+++..++..+|..|.- +.++.+|+||+..
T Consensus 209 ~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 209 ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 78999999999999999999973 6899999999864
No 413
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.87 E-value=1.3e-21 Score=205.58 Aligned_cols=237 Identities=23% Similarity=0.295 Sum_probs=153.5
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC----------CCceeeecc
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV----------HHHIVRLWD 474 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~----------HpnIV~L~~ 474 (683)
+.....||.|+|+.||.+.|..++..+|+|++........ ..++.+.+|.-....+. |-.++.-++
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~----~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d 89 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASA----NEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLD 89 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHT----THHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccch----HHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeE
Confidence 4556889999999999999999999999999866653222 22455555554444432 222332233
Q ss_pred ccccC-----------Cc-----eEEEEEecccCCChhHHHhc----CC---CcchHHHHHHHHHHHHHHHHHHhcCCce
Q 005678 475 TFEID-----------QN-----TFCTVLEYCSGKDLDAVLKA----TP---VLPEREARIIIVQIFQGLIYLNKRAQKI 531 (683)
Q Consensus 475 ~f~~d-----------~~-----~~~LV~Ey~~ggsL~~~L~~----~~---~Lse~~~~~I~~qIa~aL~yLH~~g~~I 531 (683)
...+. .. +.+++|+-+ .++|..++.. .. .+.......+..|++..+++||..| |
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G--l 166 (288)
T PF14531_consen 90 LLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG--L 166 (288)
T ss_dssp EEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--E
T ss_pred EEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc--e
Confidence 32211 11 346788887 5688888631 11 1334444566699999999999977 9
Q ss_pred EecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCccccccc-----CCCCCCchhHHHHHHH
Q 005678 532 IHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELS-----KTPLISSKVDVWSAGI 606 (683)
Q Consensus 532 IHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~-----~~~~~s~ksDVWSLGv 606 (683)
||+||+|+|+|++.+|.++|+||+......... . ....+..|.|||..... ..-.++.+.|.|+||+
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~-------~-~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY-------R-CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTEEE-------E-GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCcee-------e-ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 999999999999999999999998776543221 1 12445779999976543 1234788999999999
Q ss_pred HHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCC
Q 005678 607 LFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAER 666 (683)
Q Consensus 607 ILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kR 666 (683)
++|.|+||..||+....... ....|..+..+|+.++.||..+|.+||.+|
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~----------~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEAD----------PEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHSS-STCCCGGGST----------SGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHccCCCCCCCcccc----------ccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 99999999999987654211 111455555899999999999999999987
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.85 E-value=6e-21 Score=190.05 Aligned_cols=147 Identities=21% Similarity=0.194 Sum_probs=111.6
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhh-------------------HHHHHHHHHHHHHHHhhcCCCc
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDK-------------------KQSYIRHAIREYNIHKTLVHHH 468 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~-------------------~~~~i~~~~rEi~il~~L~Hpn 468 (683)
...||+|+||.||+|.+. +|++||||++.......... ..........|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999886 89999999987653211110 0001123356999999998887
Q ss_pred eeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCceEecccCCcceEeCCCC
Q 005678 469 IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYL-NKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 469 IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yL-H~~g~~IIHrDLKP~NILLd~~g 547 (683)
+...+.... . ..+|||||++|++|...+.....+++..+..++.|++.+|.|| |..+ |+||||||+|||++. +
T Consensus 81 v~~p~~~~~--~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g--iiHrDlkP~NIli~~-~ 154 (190)
T cd05147 81 IPCPEPILL--K-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCR--LVHADLSEYNLLYHD-G 154 (190)
T ss_pred CCCCcEEEe--c-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEEC-C
Confidence 644332221 1 2379999999888776644456789999999999999999999 6755 999999999999984 8
Q ss_pred cEEEEecCCccccc
Q 005678 548 VAKVTDFGLSKIVE 561 (683)
Q Consensus 548 ~vKL~DFGls~~~~ 561 (683)
.++|+|||+|....
T Consensus 155 ~v~LiDFG~a~~~~ 168 (190)
T cd05147 155 KLYIIDVSQSVEHD 168 (190)
T ss_pred cEEEEEccccccCC
Confidence 89999999997553
No 415
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.84 E-value=3e-21 Score=223.87 Aligned_cols=227 Identities=29% Similarity=0.414 Sum_probs=170.6
Q ss_pred cccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
....|..+++|-.|+||.||...++.+...+|+|+-+.+ .++ .||+.+- +
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~-------------lil-----------Rnilt~a------~ 130 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN-------------LIL-----------RNILTFA------G 130 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcccccc-------------hhh-----------hcccccc------C
Confidence 456789999999999999999999999999999753211 011 1233221 1
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
+ .+.| ||-...++.-+.++..- +.+++|||..| |+|||+||+|.||..-|++|++|||+++..
T Consensus 131 n-pfvv------gDc~tllk~~g~lPvdm--------vla~Eylh~yg--ivhrdlkpdnllIT~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 131 N-PFVV------GDCATLLKNIGPLPVDM--------VLAVEYLHSYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred C-ccee------chhhhhcccCCCCcchh--------hHHhHhhccCC--eecCCCCCCcceeeecccccccchhhhhhh
Confidence 1 1222 56666676666666533 88999999976 999999999999999999999999999764
Q ss_pred ccCcCCC----------cccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Q 005678 561 EDDVGSQ----------GMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILRE 630 (683)
Q Consensus 561 ~~~~~~~----------~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~ 630 (683)
....... ......+.+|||.|+|||++...+ |...+|||+||+|+|+.+.|..||..+...+-+-
T Consensus 194 Lms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqg---ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg-- 268 (1205)
T KOG0606|consen 194 LMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQG---YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG-- 268 (1205)
T ss_pred hhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhc---cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh--
Confidence 3321111 012244669999999999998766 8889999999999999999999998887765432
Q ss_pred HHHHHhhccCCCCC-cCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccCCC
Q 005678 631 DTIIKARKVEFPSR-PAVSNEAKDLIRRCLTYNQAERP---DVLTLAQDPYLTYS 681 (683)
Q Consensus 631 ~~i~~~~~~~~p~~-~~~s~el~dLI~rCL~~dP~kRP---S~~eLl~hP~l~~~ 681 (683)
......+.||.. ..++++++++|.++|..+|..|. .+.++-+|+||+..
T Consensus 269 --~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 269 --QVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred --hhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence 122334455543 46889999999999999999996 57888899999853
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.84 E-value=2.6e-20 Score=184.89 Aligned_cols=148 Identities=18% Similarity=0.165 Sum_probs=112.7
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchh-------------------hHHHHHHHHHHHHHHHhhcCCCc
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSED-------------------KKQSYIRHAIREYNIHKTLVHHH 468 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~-------------------~~~~~i~~~~rEi~il~~L~Hpn 468 (683)
...||+|+||.||+|.+. +|+.||||++......... ........+.+|+..+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999876 8999999998765321110 00011123457999999999998
Q ss_pred eeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCceEecccCCcceEeCCCC
Q 005678 469 IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNK-RAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 469 IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~-~g~~IIHrDLKP~NILLd~~g 547 (683)
|.....+.. . ..++||||++|+++.........++...+..++.+++.+|.+||. .| |+||||||.|||++ ++
T Consensus 81 i~~p~~~~~-~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILL-K--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEe-c--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE-CC
Confidence 754433322 2 237999999988655443233457888999999999999999998 66 99999999999999 79
Q ss_pred cEEEEecCCcccccc
Q 005678 548 VAKVTDFGLSKIVED 562 (683)
Q Consensus 548 ~vKL~DFGls~~~~~ 562 (683)
.++|+|||++..+..
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999986643
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=8.8e-21 Score=193.78 Aligned_cols=181 Identities=13% Similarity=0.160 Sum_probs=133.6
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHH--HHHHHHHHHHHhhcCCCceeeecccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSY--IRHAIREYNIHKTLVHHHIVRLWDTF 476 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~--i~~~~rEi~il~~L~HpnIV~L~~~f 476 (683)
.++.++|.++++||.|+||.||++.+ ++..+|||++.............. -..+.+|+..+.++.||+|..+.+++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 35788999999999999999999754 577899999865433222111110 12257899999999999999998886
Q ss_pred ccC-------CceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcE
Q 005678 477 EID-------QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVA 549 (683)
Q Consensus 477 ~~d-------~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~v 549 (683)
... .+..+|||||++|.+|.++.. +++ ..+.+++.+|..||..| |+|+||||+||+++.+| +
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHG--MVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcC--CccCCCChHHEEEeCCC-E
Confidence 532 245789999999999988732 333 24569999999999966 99999999999999988 9
Q ss_pred EEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH
Q 005678 550 KVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML 612 (683)
Q Consensus 550 KL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL 612 (683)
+|+|||.+.......... .+.... .|..++|+|||||++..+.
T Consensus 174 ~liDfg~~~~~~e~~a~d------------------~~vler--~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAKD------------------RIDLER--HYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhHH------------------HHHHHh--HhcccccccceeEeehHHH
Confidence 999999887654322111 111111 1556899999999887544
No 418
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=8.4e-21 Score=192.72 Aligned_cols=246 Identities=18% Similarity=0.284 Sum_probs=191.1
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
...++..|.+...|+.|+| +..|..+++|++......... -+.|..|.-.++-+.||||++++++|. .+.++
T Consensus 191 ~lnl~tkl~e~hsgelwrg--rwqgndivakil~vr~~t~ri-----srdfneefp~lrifshpnilpvlgacn-sppnl 262 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRG--RWQGNDIVAKILNVREVTARI-----SRDFNEEFPALRIFSHPNILPVLGACN-SPPNL 262 (448)
T ss_pred hhhhhhhhccCCCcccccc--cccCcchhhhhhhhhhcchhh-----cchhhhhCcceeeecCCchhhhhhhcc-CCCCc
Confidence 3455677889999999999 467778888887554332222 246778888899999999999999996 66788
Q ss_pred EEEEecccCCChhHHHhcCC--CcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEE--ecCCccc
Q 005678 484 CTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVT--DFGLSKI 559 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~--~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~--DFGls~~ 559 (683)
.++..||+.|+|+.+|.... .+.-.++..++.+|+.|+.|||+..+-|.-.-|.+..|++|++..++|. |--++..
T Consensus 263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq 342 (448)
T KOG0195|consen 263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ 342 (448)
T ss_pred eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee
Confidence 89999999999999997553 3567788899999999999999987667777899999999998877764 3222221
Q ss_pred cccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhcc
Q 005678 560 VEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKV 639 (683)
Q Consensus 560 ~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~ 639 (683)
.. ...-.|.||+||.+.......--..+|+|||++++||+.|...||..-.+.+.-.. +....+
T Consensus 343 ---e~---------gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk----ialegl 406 (448)
T KOG0195|consen 343 ---EV---------GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK----IALEGL 406 (448)
T ss_pred ---cc---------ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh----hhhccc
Confidence 11 11346789999998654433345679999999999999999999988877665433 333445
Q ss_pred CCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 640 EFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 640 ~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
....+|.++..+..|+.-|+..||.+||.+..++
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 5556689999999999999999999999987654
No 419
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=7.1e-20 Score=194.01 Aligned_cols=197 Identities=24% Similarity=0.354 Sum_probs=144.8
Q ss_pred CCCceeeecccccc--------------------------CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHH
Q 005678 465 VHHHIVRLWDTFEI--------------------------DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIF 518 (683)
Q Consensus 465 ~HpnIV~L~~~f~~--------------------------d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa 518 (683)
+|||||.++.+|+. .+..+|+||..++ .+|+.++.... .+....+.|+.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~-~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH-RSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC-CchHHHHHHHHHHH
Confidence 69999999998853 2346899999985 49999996554 67888889999999
Q ss_pred HHHHHHHhcCCceEecccCCcceEeC--CC--CcEEEEecCCccccccCcCCCccccc---ccCCCCCccCCcccccccC
Q 005678 519 QGLIYLNKRAQKIIHYDLKPGNVLFD--EF--GVAKVTDFGLSKIVEDDVGSQGMELT---SQGAGTYWYLPPECFELSK 591 (683)
Q Consensus 519 ~aL~yLH~~g~~IIHrDLKP~NILLd--~~--g~vKL~DFGls~~~~~~~~~~~~~l~---~~~~GT~~Y~APE~~~~~~ 591 (683)
.|+.|||.+| |.|||+|++|||+. ++ -.+.|+|||+|-.-... + -...+. -...|+...||||++....
T Consensus 352 Eav~hL~~hg--vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h-G-lqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 352 EAVTHLHKHG--VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH-G-LQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHcc--chhhcccccceEEEecCCCCcEEEEcccceeeecccc-c-cccccccccccCCCcceecchhhhhcCC
Confidence 9999999966 99999999999983 33 35889999988543221 1 111111 1225788899999987665
Q ss_pred CCCC---CchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCC-CcCCCHHHHHHHHHhcccCCCCCC
Q 005678 592 TPLI---SSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPS-RPAVSNEAKDLIRRCLTYNQAERP 667 (683)
Q Consensus 592 ~~~~---s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~-~~~~s~el~dLI~rCL~~dP~kRP 667 (683)
++.. -.+.|.|+.|.+.||++....||..... ..+..... ..-.+|. +..+++.+.+++..+|..||.+|+
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe--m~L~~r~Y---qe~qLPalp~~vpp~~rqlV~~lL~r~pskRv 502 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE--MLLDTRTY---QESQLPALPSRVPPVARQLVFDLLKRDPSKRV 502 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccch--heechhhh---hhhhCCCCcccCChHHHHHHHHHhcCCccccC
Confidence 4421 2479999999999999999999976322 11211111 1223333 347999999999999999999999
Q ss_pred CHHHH
Q 005678 668 DVLTL 672 (683)
Q Consensus 668 S~~eL 672 (683)
++.=+
T Consensus 503 sp~iA 507 (598)
T KOG4158|consen 503 SPNIA 507 (598)
T ss_pred CccHH
Confidence 86433
No 420
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=3.3e-20 Score=215.30 Aligned_cols=257 Identities=20% Similarity=0.242 Sum_probs=183.5
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceE
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTF 483 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~ 483 (683)
.|...+.||.+.|=.|.+|.+. ...|+||++-.....- .-.. +...+.|+. ...++|||.+++.-+-. .....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~--eG~vVvKVFvk~~p~~--sL~~-~~qrL~~ik-~~l~~~pn~lPfqk~~~-t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR--EGLVVVKVFVKQDPTI--SLRP-FKQRLEEIK-FALMKAPNCLPFQKVLV-TDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC--CceEEEEEEeccCCCC--CchH-HHHHHHHHH-HHhhcCCcccchHHHHH-hhHHH
Confidence 6778899999999999999653 3349999875443111 1111 233445555 55678999999876644 45567
Q ss_pred EEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc--c
Q 005678 484 CTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV--E 561 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~--~ 561 (683)
|+|-+|. ..+|++.|...+.+..-+.+.|+.|++.||.-+|..| |+|+|||.+||||++-+.+.|+||...+.. +
T Consensus 97 ylvRqyv-khnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g--VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 97 YLVRQYV-KHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG--VCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHHHHHH-hhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC--ccccccccceEEEeeechhhhhcccccCCccCC
Confidence 7888998 5699999998888999999999999999999999966 999999999999999999999999877653 2
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccC--------CCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHH
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSK--------TPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDT 632 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--------~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~ 632 (683)
.+.......+..+..--.+|+|||-|.... .+..+++.||||+||++.||++ |++||...+-- .++..
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~--aYr~~- 250 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLL--AYRSG- 250 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHH--hHhcc-
Confidence 332222222333334455799999986522 2347889999999999999998 89999532211 01100
Q ss_pred HHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 633 IIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 633 i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
. ....++--..--+..+..+|..|+..||++|.++++.|+-
T Consensus 251 -~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 251 -N-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred -C-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0 0000000000012368899999999999999999999864
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=5.4e-19 Score=177.90 Aligned_cols=196 Identities=18% Similarity=0.069 Sum_probs=142.7
Q ss_pred eEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCCceEE
Q 005678 406 ALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 406 ~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~~~~~ 484 (683)
.+...|++|+||+||.+. ..+..|+.+-+.....|.... .-..+.+|+.+|++|. |++|+.++++ +..+
T Consensus 5 ~~~~~l~~~~f~~v~~~~--~~~~k~~~~~l~~~~~~~~~~---~~~l~~rE~~iL~~L~~~~~vP~ll~~-----~~~~ 74 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVR--GGERKFVRRDLSAAPWWLRGV---AWWLARREALALRQLDGLPRTPRLLHW-----DGRH 74 (218)
T ss_pred ccceeecCCCcceEEEee--cCCceeeecccccchhhhhhH---HHHHHHHHHHHHHhcCCCCCCCEEEEE-----cCEE
Confidence 457889999999999884 477888888776655543321 1225788999999995 4788888875 2358
Q ss_pred EEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEeccc-CCcceEeCCCCcEEEEecCCccccccC
Q 005678 485 TVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDL-KPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDL-KP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
++|+|+.|.+|...+.. . ...++.+++.+|.++|..| |||||| ||.|||++.+|.++|+|||++......
T Consensus 75 lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~G--IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 75 LDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCG--VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred EEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCc--CccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 99999999998765321 1 1347789999999999966 999999 799999999999999999999865432
Q ss_pred cCC------Ccc--cccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 005678 564 VGS------QGM--ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHD 621 (683)
Q Consensus 564 ~~~------~~~--~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~ 621 (683)
... ..+ -+......++.|++|+.......+. -...++++.|+-+|.++|+..|+-.+
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~-~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTS-WIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccch-hHHHHHHHhcchHHHHHhccCCcccc
Confidence 210 000 0011123688899998765443221 14679999999999999999887443
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=2.9e-18 Score=173.53 Aligned_cols=135 Identities=20% Similarity=0.198 Sum_probs=104.9
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-----CCCceeeeccccccCC--
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-----VHHHIVRLWDTFEIDQ-- 480 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-----~HpnIV~L~~~f~~d~-- 480 (683)
..+||+|+||.||. +..++.. +||++...... ..+.+.+|+.+++.+ .||||+++|+++..+.
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~-------~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~ 76 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG-------GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT 76 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccc-------hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence 46899999999996 5666665 69987553211 134689999999999 6799999999998653
Q ss_pred ce-EEEEEec--ccCCChhHHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCceEecccCCcceEeCC----CCcEEEE
Q 005678 481 NT-FCTVLEY--CSGKDLDAVLKATPVLPEREARIIIVQIFQGL-IYLNKRAQKIIHYDLKPGNVLFDE----FGVAKVT 552 (683)
Q Consensus 481 ~~-~~LV~Ey--~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL-~yLH~~g~~IIHrDLKP~NILLd~----~g~vKL~ 552 (683)
+. +.+|+|| +++++|.++++.. .+++. ..++.+++.++ .|||+.+ ||||||||+|||++. ++.++|+
T Consensus 77 g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 77 GYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred eEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEeccCCCCCcEEEE
Confidence 23 4478999 5579999999765 36655 35678888887 8999965 999999999999974 3479999
Q ss_pred ecCCc
Q 005678 553 DFGLS 557 (683)
Q Consensus 553 DFGls 557 (683)
||+-+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95433
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=2.9e-18 Score=202.58 Aligned_cols=201 Identities=21% Similarity=0.219 Sum_probs=158.6
Q ss_pred ccccccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC---CCceeee
Q 005678 396 NNFQILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV---HHHIVRL 472 (683)
Q Consensus 396 ~~~~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~---HpnIV~L 472 (683)
..+++-+..|-|.+.||+|+||.||+|.... |+.||+|+-.....|.--.. ..++.+|+ -+.|+.+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~----------~q~~~RLk~~~~~~~~~~ 759 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYIC----------LQVMERLKPQMLPSIMHI 759 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeeh----------HHHHHhhchhhhcchHHH
Confidence 4567778899999999999999999998766 99999999888877754322 22333443 2456666
Q ss_pred ccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC-------C
Q 005678 473 WDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD-------E 545 (683)
Q Consensus 473 ~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd-------~ 545 (683)
+.++. -.+.-+||+||.+.|+|.+++...+.+++..+..++.||+..+..||..+ |||+||||+|+||. .
T Consensus 760 ~~a~~-~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~--IIHgDiKPDNfll~~~~~~~~~ 836 (974)
T KOG1166|consen 760 SSAHV-FQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMG--IIHGDIKPDNFLLRREICADSD 836 (974)
T ss_pred HHHHc-cCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcc--eecccCCcceeEeecccCCCCc
Confidence 66654 34556799999999999999998889999999999999999999999966 99999999999994 2
Q ss_pred CCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCC
Q 005678 546 FGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRR 616 (683)
Q Consensus 546 ~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~ 616 (683)
+..++|+|||.+.-+.--.. + ......++|-.+-.+|+..+.. +++.+|.|.|+.+++-||+|++
T Consensus 837 ~~~l~lIDfG~siDm~lfp~--~-~~F~~~~~td~f~C~EM~~grp---WtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 837 SKGLYLIDFGRSIDMKLFPD--G-TKFKAVWHTDLFDCIEMREGRP---WTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ccceEEEecccceeeeEcCC--C-cEEeeeeccccchhHHHhcCCC---CchhhhhHHHHHHHHHHHHHHH
Confidence 34699999998865432111 1 1223347888898999876444 9999999999999999999874
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=5e-18 Score=174.91 Aligned_cols=149 Identities=19% Similarity=0.129 Sum_probs=112.8
Q ss_pred eeEEEEecccCceEEEEEE-EccCCeEEEEEEeccCcccch-----------------hhHHHHHHHHHHHHHHHhhcCC
Q 005678 405 YALLNLLGKGGFSEVYKAY-DLVEHRYVACKLHGLNAQWSE-----------------DKKQSYIRHAIREYNIHKTLVH 466 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~-d~~~g~~VAVKi~~~~~~~~~-----------------~~~~~~i~~~~rEi~il~~L~H 466 (683)
|.+.+.||+|+||.||+|. +..+|..||||++........ .........+.+|+.++..+.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 7788999999999999998 667999999999865432100 0011112345689999999976
Q ss_pred Cc--eeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC
Q 005678 467 HH--IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD 544 (683)
Q Consensus 467 pn--IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd 544 (683)
.+ +..+++. ...++||||++|.+|...+.....+....+..++.+|+.+|.|||..+ .|+|+||||+|||++
T Consensus 110 ~~i~~p~~~~~-----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g-~iiH~Dikp~NIli~ 183 (237)
T smart00090 110 AGVPVPKPIAW-----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG-ELVHGDLSEYNILVH 183 (237)
T ss_pred cCCCCCeeeEe-----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC-CEEeCCCChhhEEEE
Confidence 33 3333322 124799999999888776544445677777899999999999999842 399999999999999
Q ss_pred CCCcEEEEecCCcccc
Q 005678 545 EFGVAKVTDFGLSKIV 560 (683)
Q Consensus 545 ~~g~vKL~DFGls~~~ 560 (683)
++.++|+|||++...
T Consensus 184 -~~~i~LiDFg~a~~~ 198 (237)
T smart00090 184 -DGKVVIIDVSQSVEL 198 (237)
T ss_pred -CCCEEEEEChhhhcc
Confidence 789999999998754
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=3.2e-17 Score=163.78 Aligned_cols=141 Identities=21% Similarity=0.208 Sum_probs=112.1
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccch-hhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSE-DKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVL 487 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~-~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~ 487 (683)
+.||+|++|.||+|.. .|..|++|+......... .........+.+|+.++..+.|++|+....++. +....++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-DPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-eCCCCEEEE
Confidence 5799999999999975 778899997654322111 111122346788999999999998876655553 456778999
Q ss_pred ecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 488 EYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 488 Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
||++|++|.+++..... ....++.+++.+|.+||..+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~--i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG--IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC--cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999865432 77889999999999999965 99999999999999 78999999999875
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=6e-17 Score=160.51 Aligned_cols=138 Identities=20% Similarity=0.155 Sum_probs=106.7
Q ss_pred EecccCceEEEEEEEccCCeEEEEEEeccCccc-chhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEe
Q 005678 410 LLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQW-SEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~-~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
+||+|+||.||+|. .++..|++|........ ...........+.+|+.++..+.|+++.....++. +.+..++|||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-DPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-ECCCCEEEEE
Confidence 48999999999996 57789999986543211 11112223466788999999999887544333332 4556789999
Q ss_pred cccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 489 YCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 489 y~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
|++|++|.+++..... .++.+++.+|.+||..+ ++|+|++|.|||++ ++.++|+|||++...
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~g--i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAG--IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCC--eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999999998765421 78999999999999966 99999999999999 799999999998753
No 427
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=2.4e-17 Score=183.54 Aligned_cols=205 Identities=27% Similarity=0.367 Sum_probs=154.8
Q ss_pred HhhcCCCceeeeccccccCCceEEEEEecccCCChhHHHhc-CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCc
Q 005678 461 HKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKA-TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPG 539 (683)
Q Consensus 461 l~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~-~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~ 539 (683)
|+.+.|.|+.++++.+. ++..+++|.+||..|+|.+.+.. .-.+++.....++++|+.||.|||... -..|+.|++.
T Consensus 1 l~~l~h~n~~~f~g~~~-~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASV-DGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEe-cCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeeccc
Confidence 35788999999999985 67899999999999999999976 456888889999999999999999864 2399999999
Q ss_pred ceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCC----CCchhHHHHHHHHHHHHHcCC
Q 005678 540 NVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPL----ISSKVDVWSAGILFYQMLFGR 615 (683)
Q Consensus 540 NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~----~s~ksDVWSLGvILyELLtG~ 615 (683)
|.+++....+||+|||+.......... .......-..-|.|||.+....... .+.+.||||||++++|+++..
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~---~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEP---EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccc---cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999998876431000 0011112334599999987653322 477899999999999999999
Q ss_pred CCCCCCchHH----HHHHHHHHHH-hhccCCCCC---cCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 005678 616 RPFGHDQTQE----RILREDTIIK-ARKVEFPSR---PAVSNEAKDLIRRCLTYNQAERPDVLTLA 673 (683)
Q Consensus 616 ~PF~~~~~~e----~il~~~~i~~-~~~~~~p~~---~~~s~el~dLI~rCL~~dP~kRPS~~eLl 673 (683)
.||....... .++. +.. ...+..|.- ..+++++..++.+||..+|..||++.++-
T Consensus 156 ~~~~~~~~~~~~~eii~~---~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILR---VKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIR 218 (484)
T ss_pred CccccccccCChHHHHHH---HHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence 9997533222 2222 112 111122221 14566799999999999999999998875
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=1e-16 Score=159.70 Aligned_cols=144 Identities=26% Similarity=0.276 Sum_probs=108.8
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhh--H-------------HHHHHHHHHHHHHHhhcCCCc
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDK--K-------------QSYIRHAIREYNIHKTLVHHH 468 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~--~-------------~~~i~~~~rEi~il~~L~Hpn 468 (683)
-|.+.+.||.|+||.||+|.. .+|+.||||++.......... . ......+.+|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 377789999999999999976 479999999976543111100 0 001123677999999998874
Q ss_pred --eeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC
Q 005678 469 --IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF 546 (683)
Q Consensus 469 --IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~ 546 (683)
++..++ .+..++||||++|++|..+... .....++.+++.++.++|..+ |+|+||||.|||++.+
T Consensus 95 i~v~~~~~-----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~g--i~H~Dl~p~Nill~~~ 161 (198)
T cd05144 95 FPVPKPID-----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHG--IIHGDLSEFNILVDDD 161 (198)
T ss_pred CCCCceee-----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCC--CCcCCCCcccEEEcCC
Confidence 333332 2345899999999998776431 345678899999999999965 9999999999999999
Q ss_pred CcEEEEecCCccccc
Q 005678 547 GVAKVTDFGLSKIVE 561 (683)
Q Consensus 547 g~vKL~DFGls~~~~ 561 (683)
+.++|+|||++....
T Consensus 162 ~~~~liDfg~~~~~~ 176 (198)
T cd05144 162 EKIYIIDWPQMVSTD 176 (198)
T ss_pred CcEEEEECCccccCC
Confidence 999999999996544
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.69 E-value=1.2e-17 Score=183.56 Aligned_cols=211 Identities=23% Similarity=0.339 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHhhcCCCceeeecc-------ccc----cCCceEEEEEecccCCChhHHHhcC---CCcchHHHHHHHHH
Q 005678 451 IRHAIREYNIHKTLVHHHIVRLWD-------TFE----IDQNTFCTVLEYCSGKDLDAVLKAT---PVLPEREARIIIVQ 516 (683)
Q Consensus 451 i~~~~rEi~il~~L~HpnIV~L~~-------~f~----~d~~~~~LV~Ey~~ggsL~~~L~~~---~~Lse~~~~~I~~q 516 (683)
.....+++..+....|-+..-+.+ .+. ....++||.|++|.-.+|.++|... ...++.....++.|
T Consensus 288 ~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q 367 (516)
T KOG1033|consen 288 CKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQ 367 (516)
T ss_pred hhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHh
Confidence 334555666666655544444433 110 0134688999999999999999643 34677788899999
Q ss_pred HHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCc-CCCcccccccCCCCCccCCcccccccCCCCC
Q 005678 517 IFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDV-GSQGMELTSQGAGTYWYLPPECFELSKTPLI 595 (683)
Q Consensus 517 Ia~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~-~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~ 595 (683)
++.|+.| ++ .+|+|+||.||++..+..+||+|||+........ ......-..+.+||.+||+||.+.+.. |
T Consensus 368 ~~~~~~y---k~--~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~---y 439 (516)
T KOG1033|consen 368 IAPAVEY---KG--LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ---Y 439 (516)
T ss_pred hccchhh---cc--chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhh---h
Confidence 9999999 44 9999999999999999999999999988776543 111112345568999999999998666 9
Q ss_pred CchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCC--CCcCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 005678 596 SSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFP--SRPAVSNEAKDLIRRCLTYNQAERPDVLTL 672 (683)
Q Consensus 596 s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p--~~~~~s~el~dLI~rCL~~dP~kRPS~~eL 672 (683)
+.++||||||+||+|++. -..+|.... ..-......+| ..... +.-..|+..+|.+.|.+||++.+.
T Consensus 440 ~~kvdIyaLGlil~EL~~~f~T~~er~~---------t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 440 SEKVDIYALGLILAELLIQFSTQFERIA---------TLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhhcchhhHHHHHHHHHHHhccHHHHHH---------hhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 999999999999999996 333332111 11111222233 11122 234589999999999999988888
Q ss_pred hcCcccC
Q 005678 673 AQDPYLT 679 (683)
Q Consensus 673 l~hP~l~ 679 (683)
..|+|++
T Consensus 510 ~~~~~~~ 516 (516)
T KOG1033|consen 510 ALHEFLQ 516 (516)
T ss_pred hhhhhcC
Confidence 8888864
No 430
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=1.8e-18 Score=199.34 Aligned_cols=266 Identities=26% Similarity=0.380 Sum_probs=205.2
Q ss_pred ccceeEEEEecccCceEEEEEEEc-cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccC
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDL-VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEID 479 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~-~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d 479 (683)
...|.+.+.||+|+|+.|-..... .....+|+|.+.... +......+...|..+-+.+. |+|++.+++... +
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-----~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~-~ 92 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-----KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS-S 92 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-----CccchhhhcCccccccccccccccccccCCccC-C
Confidence 456888888999999999888653 334557777654443 12223456667888888887 999999999885 7
Q ss_pred CceEEEEEecccCCChhHHH-hcCC-CcchHHHHHHHHHHHHHHHHHH-hcCCceEecccCCcceEeCCCC-cEEEEecC
Q 005678 480 QNTFCTVLEYCSGKDLDAVL-KATP-VLPEREARIIIVQIFQGLIYLN-KRAQKIIHYDLKPGNVLFDEFG-VAKVTDFG 555 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~L-~~~~-~Lse~~~~~I~~qIa~aL~yLH-~~g~~IIHrDLKP~NILLd~~g-~vKL~DFG 555 (683)
....+++++|..|+++...+ .... ..+...+..++.|+..++.|+| ..+ +.|+||||+|.+++..+ .+++.|||
T Consensus 93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s~~~l~~~df~ 170 (601)
T KOG0590|consen 93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG--VTHRDIKPSNSLLDESGSALKIADFG 170 (601)
T ss_pred CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc--cccCCCCCccchhccCCCcccCCCch
Confidence 78889999999999999998 5554 6788888999999999999999 645 99999999999999999 99999999
Q ss_pred CccccccCcCCCcccccccCCC-CCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH
Q 005678 556 LSKIVEDDVGSQGMELTSQGAG-TYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTII 634 (683)
Q Consensus 556 ls~~~~~~~~~~~~~l~~~~~G-T~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~ 634 (683)
+|..+....+.. ......+| ++.|+|||.+.... ...+..|+||.|+++.-+++|..||.........+.. -+.
T Consensus 171 ~At~~~~~~g~~--~~~~~~~g~s~~y~a~E~~~~~~--~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~-~~~ 245 (601)
T KOG0590|consen 171 LATAYRNKNGAE--RSLKDRCGSSPPYGAPEHLSGKA--YRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS-WKS 245 (601)
T ss_pred hhccccccCCcc--eeeecccCCCCCCCCcccccchh--hcCCCcccccccccccccccCCCCcccccccccccee-ecc
Confidence 998876622222 22334467 99999999886532 2456789999999999999999999765543321110 000
Q ss_pred HhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 005678 635 KARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 680 (683)
Q Consensus 635 ~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~ 680 (683)
.........+..++....+++.+++..+|..|.+..++-.+||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 246 NKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 1112234455678899999999999999999999999999999986
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.66 E-value=4.8e-16 Score=177.96 Aligned_cols=145 Identities=22% Similarity=0.194 Sum_probs=110.2
Q ss_pred ccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCc-ccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCC
Q 005678 402 NHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNA-QWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQ 480 (683)
Q Consensus 402 ~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~-~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~ 480 (683)
...|...+.||+|+||+||+|.. .+..+++|...... .............+.+|+.++..++|++|+..+.++. +.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~--~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-~~ 408 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEY--LGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV-DP 408 (535)
T ss_pred ccccCccceeccCCcEEEEEEee--cCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE-eC
Confidence 34556788999999999999965 34445555432211 1111112223456889999999999999887665443 45
Q ss_pred ceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 481 NTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
...++||||++|++|.+++. ....++.+++.+|.|||+.+ |+||||||+|||+ .++.++|+|||+++..
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~g--iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAG--IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCC--CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 56789999999999999875 34678999999999999965 9999999999999 5789999999999753
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=2e-15 Score=147.98 Aligned_cols=143 Identities=24% Similarity=0.260 Sum_probs=98.7
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHH-----------------HHHHHHHHHHHhhcCCCc--
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSY-----------------IRHAIREYNIHKTLVHHH-- 468 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~-----------------i~~~~rEi~il~~L~Hpn-- 468 (683)
.+.||+|+||.||+|.+. ++..||||++.............. ......|...+..+.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999875 799999999865433221111100 001134666666665443
Q ss_pred eeeeccccccCCceEEEEEecccCCChhHH-HhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCceEecccCCcceEeCCC
Q 005678 469 IVRLWDTFEIDQNTFCTVLEYCSGKDLDAV-LKATPVLPEREARIIIVQIFQGLIYLNK-RAQKIIHYDLKPGNVLFDEF 546 (683)
Q Consensus 469 IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~-L~~~~~Lse~~~~~I~~qIa~aL~yLH~-~g~~IIHrDLKP~NILLd~~ 546 (683)
+.+.+++ ...++||||++|+++... +.... .. ..+..++.+++.++.++|. .+ |+|+||||+|||++ +
T Consensus 81 ~~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 81 VPKPIDL-----NRHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD-D 150 (187)
T ss_pred CCceEec-----CCCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE-C
Confidence 3334432 235899999998544321 21111 11 6678899999999999998 55 99999999999999 8
Q ss_pred CcEEEEecCCccccc
Q 005678 547 GVAKVTDFGLSKIVE 561 (683)
Q Consensus 547 g~vKL~DFGls~~~~ 561 (683)
+.++|+|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 999999999996543
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=1.2e-14 Score=149.92 Aligned_cols=142 Identities=18% Similarity=0.167 Sum_probs=104.0
Q ss_pred EEec-ccCceEEEEEEEccCCeEEEEEEeccCcccchhhH------HHHHHHHHHHHHHHhhcCCCce--eeeccccccC
Q 005678 409 NLLG-KGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKK------QSYIRHAIREYNIHKTLVHHHI--VRLWDTFEID 479 (683)
Q Consensus 409 ~~LG-kGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~------~~~i~~~~rEi~il~~L~HpnI--V~L~~~f~~d 479 (683)
..|| .||.|+||.+.. .+..++||.+........... ......+.+|+.++..|.|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 788888988854 477899998754221100000 1123567889999999998875 5566554322
Q ss_pred Cce---EEEEEecccC-CChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecC
Q 005678 480 QNT---FCTVLEYCSG-KDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFG 555 (683)
Q Consensus 480 ~~~---~~LV~Ey~~g-gsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFG 555 (683)
... .++||||++| .+|..++... .+++. .+.+|+.+|.+||..| |+|+||||.|||++.++.++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~----~~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-PLSEE----QWQAIGQLIARFHDAG--VYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-CCCHH----HHHHHHHHHHHHHHCC--CCCCCCCchhEEEcCCCCEEEEECC
Confidence 222 3599999997 6999888654 35544 3568999999999966 9999999999999988999999999
Q ss_pred Cccc
Q 005678 556 LSKI 559 (683)
Q Consensus 556 ls~~ 559 (683)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8864
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=2.3e-14 Score=132.37 Aligned_cols=134 Identities=23% Similarity=0.263 Sum_probs=108.4
Q ss_pred EEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCC--CceeeeccccccCCceEE
Q 005678 407 LLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVH--HHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 407 l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~H--pnIV~L~~~f~~d~~~~~ 484 (683)
+++.||.|+++.||++.+ .+..+++|....... ...+..|+.++..+.| +++++++..+. ..+..+
T Consensus 2 ~~~~i~~g~~~~v~~~~~--~~~~~~iK~~~~~~~---------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-~~~~~~ 69 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGT--KDEDYVLKINPSREK---------GADREREVAILQLLARKGLPVPKVLASGE-SDGWSY 69 (155)
T ss_pred cceecccccccceEEEEe--cCCeEEEEecCCCCc---------hhHHHHHHHHHHHHHHcCCCCCeEEEEcC-CCCccE
Confidence 457899999999999975 347899998754321 2357788899999976 48888887765 456789
Q ss_pred EEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcC-CceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 485 TVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRA-QKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g-~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
++|||++|+.+..+ +......++.+++.+|.+||... .+++|+||+|.|||++..+.++++|||++..
T Consensus 70 ~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 70 LLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99999998877654 45666778999999999999852 3599999999999999989999999998864
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=9e-14 Score=155.44 Aligned_cols=263 Identities=20% Similarity=0.262 Sum_probs=194.6
Q ss_pred cccccceeEEEEecc--cCceEEEEEEE--ccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeec
Q 005678 399 QILNHRYALLNLLGK--GGFSEVYKAYD--LVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLW 473 (683)
Q Consensus 399 ~i~~~ry~l~~~LGk--GgfG~Vyka~d--~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~ 473 (683)
.+....+.+...+|. |.+|.||.+.. ..++..+|+|.-.......... ..-.+|+.....++ |+|.|+.+
T Consensus 110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~-----~~k~~~~~s~~~i~~~~~~v~~~ 184 (524)
T KOG0601|consen 110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDS-----KRKLREFLSHHKIDSHENPVRDS 184 (524)
T ss_pred chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCcccc-----ccccchhhcccccCccccccccC
Confidence 455677888899999 99999999987 7889999999743333322221 12345666677774 99999999
Q ss_pred cccccCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHH----HHHHHHhcCCceEecccCCcceEeCCC-C
Q 005678 474 DTFEIDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQ----GLIYLNKRAQKIIHYDLKPGNVLFDEF-G 547 (683)
Q Consensus 474 ~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~----aL~yLH~~g~~IIHrDLKP~NILLd~~-g 547 (683)
..|. +.+..++-+|+| +.+|..+.... ..++...++.++.+... ||.++|. .+++|-|+||.||++..+ .
T Consensus 185 ~~~e-~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs--~~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 185 PAWE-GSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHS--NNIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred cccc-cCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCC--Ccccccccchhheecccccc
Confidence 8886 778888999999 56777777543 45899999999999999 9999998 459999999999999998 8
Q ss_pred cEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHH
Q 005678 548 VAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERI 627 (683)
Q Consensus 548 ~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~i 627 (683)
.++++|||+...+....-...........|...|++||... +.++...|+|+||.++.+-.+|-.++....... +
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~----~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-W 335 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN----GLATFASDIFSLGEVILEAILGSHLPSVGKNSS-W 335 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc----cccchHhhhcchhhhhHhhHhhcccccCCCCCC-c
Confidence 99999999998876654332222234447888899999874 336889999999999999988876654331110 0
Q ss_pred HHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 628 LREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 628 l~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
...+... ...++ ....+..+...+..++..+|..|++...+..++++.
T Consensus 336 ~~~r~~~--ip~e~--~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~ 383 (524)
T KOG0601|consen 336 SQLRQGY--IPLEF--CEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH 383 (524)
T ss_pred ccccccc--Cchhh--hcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence 0100000 11111 123455666689999999999999999999999875
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=2.3e-13 Score=142.30 Aligned_cols=207 Identities=21% Similarity=0.275 Sum_probs=142.5
Q ss_pred HHHhhcCCCceeeecccccc----CCceEEEEEecccCCChhHHHhc----CCCcchHHHHHHHHHHHHHHHHHHhcCCc
Q 005678 459 NIHKTLVHHHIVRLWDTFEI----DQNTFCTVLEYCSGKDLDAVLKA----TPVLPEREARIIIVQIFQGLIYLNKRAQK 530 (683)
Q Consensus 459 ~il~~L~HpnIV~L~~~f~~----d~~~~~LV~Ey~~ggsL~~~L~~----~~~Lse~~~~~I~~qIa~aL~yLH~~g~~ 530 (683)
.-+-++.|.|||+++.+|.. +.....+++|||..|+|..+|++ ...+......+++-||++||.|||+..++
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 34445679999999988852 23457789999999999999954 35688888899999999999999999999
Q ss_pred eEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHH
Q 005678 531 IIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQ 610 (683)
Q Consensus 531 IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyE 610 (683)
|+|+++..+-|++..+|-+||+---.....+ ........-.....|-++|.+||+=. ....+-.+|||+||.+..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~-s~~~~~~~Ek~~~~~~~g~~a~~sg~---~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP-SVNSTREAEKSVNTSLPGFSAPESGT---TTNTTGASDIYKFGMCALE 274 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccch-hhhhhhHhhhhccccCCccccCCcCc---ccccccchhhhhhhHHHHH
Confidence 9999999999999999988875321111110 00000001122235778999999533 3335678999999999999
Q ss_pred HHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHH-HHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 611 MLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNE-AKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 611 LLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~e-l~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
|.-+..--+...+ ....+..+ ....+. +++. -..+|.+|+...|..||++..++.||-+
T Consensus 275 mailEiq~tnseS--~~~~ee~i---a~~i~~----len~lqr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 275 MAILEIQSTNSES--KVEVEENI---ANVIIG----LENGLQRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred HHHheeccCCCcc--eeehhhhh---hhheee----ccCccccCcCcccccCCCCCCcchhhhhcCcee
Confidence 9877643222111 01111111 111111 1111 2468999999999999999999999965
No 437
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.42 E-value=7.3e-14 Score=163.16 Aligned_cols=268 Identities=26% Similarity=0.306 Sum_probs=201.0
Q ss_pred cccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc
Q 005678 399 QILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI 478 (683)
Q Consensus 399 ~i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~ 478 (683)
...-+.+.+.+-+-.|.||.++.+.-..+|...++|++....... ...++...++-.++-...||.++..+..|.
T Consensus 800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~----~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~- 874 (1205)
T KOG0606|consen 800 RSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIR----TNDYESIRSKSNILITPRSPAVVRSFPSFP- 874 (1205)
T ss_pred cCCCccceecccccCCCCcccccCCccccccccchhhhccchhhc----cccccccCCccCccccCCCCceecccCCCC-
Confidence 345566778888999999999999766677677777654432111 111334445555555566788887766643
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
.....++|++|+.+++|...|...+..+..-++..+..++.++.|||... ++|+|++|.|+|...+|..+++|||...
T Consensus 875 ~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~--r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 875 CRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSL--RKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred CCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccch--hhcccccccchhhcccCCcccCcccccc
Confidence 56678899999999999999988888888889999999999999999853 8999999999999999999999998433
Q ss_pred ccccC---cCC------------------Cc-----ccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH
Q 005678 559 IVEDD---VGS------------------QG-----MELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML 612 (683)
Q Consensus 559 ~~~~~---~~~------------------~~-----~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL 612 (683)
.+..- .+. .. ........||+.|++||...+.. ..+.+|+|++|+++++.+
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~---hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR---HGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc---CCCcchhhhhhhhhhhhh
Confidence 22110 000 00 01122357999999999886554 567889999999999999
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHhhccCCCCCc-CCCHHHHHHHHHhcccCCCCCCCHH---HHhcCcccCC
Q 005678 613 FGRRPFGHDQTQERILREDTIIKARKVEFPSRP-AVSNEAKDLIRRCLTYNQAERPDVL---TLAQDPYLTY 680 (683)
Q Consensus 613 tG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~-~~s~el~dLI~rCL~~dP~kRPS~~---eLl~hP~l~~ 680 (683)
+|.+||.....+..+- -+......+|..+ ..+.++++++.+.|..+|.+|..+. ++-.||||+-
T Consensus 1030 ~g~pp~na~tpq~~f~----ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~ 1097 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQQIFE----NILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQD 1097 (1205)
T ss_pred cCCCCCCCcchhhhhh----ccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCC
Confidence 9999998877765441 1333445566544 5788999999999999999999887 7888999974
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.40 E-value=1.6e-12 Score=145.52 Aligned_cols=148 Identities=18% Similarity=0.188 Sum_probs=98.0
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHH---------------------------HHHH------HHH
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQ---------------------------SYIR------HAI 455 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~---------------------------~~i~------~~~ 455 (683)
+.||.|++|.||+|.. .+|+.||||+........-..+. .+.. .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5699999999999974 57999999998665321110000 0001 244
Q ss_pred HHHHHHhhcC----CCceeeeccccccCCceEEEEEecccCCChhHHHhcC-CCcchHHHHHHHHHHHH-HHHHHHhcCC
Q 005678 456 REYNIHKTLV----HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKAT-PVLPEREARIIIVQIFQ-GLIYLNKRAQ 529 (683)
Q Consensus 456 rEi~il~~L~----HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~-~~Lse~~~~~I~~qIa~-aL~yLH~~g~ 529 (683)
+|...+..+. |.+-|.+-.+|.......+|||||++|++|.++.... ..+ ....++..++. .+..+|..|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~g- 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRDG- 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhCC-
Confidence 5555555552 2222332223322233468999999999999886432 112 23345555555 467788755
Q ss_pred ceEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 530 KIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 530 ~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
++|+|++|.||+++.+|.++|+|||++..+..
T Consensus 278 -~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 278 -FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred -ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 99999999999999999999999999987754
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.34 E-value=1.9e-12 Score=147.51 Aligned_cols=149 Identities=18% Similarity=0.228 Sum_probs=95.9
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccc---------------------------hhhHHHHHHHHHHH
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWS---------------------------EDKKQSYIRHAIRE 457 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~---------------------------~~~~~~~i~~~~rE 457 (683)
|.. +.||.|++|.||+|....+|+.||||+........ ......+.+.+.+|
T Consensus 122 fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E 200 (537)
T PRK04750 122 FDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE 200 (537)
T ss_pred cCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence 444 67999999999999987779999999987653210 00011222333333
Q ss_pred HH------HHhhcC----CCceeeeccccccCCceEEEEEecccCCChhHH--HhcCC----CcchHHHHHHHHHHHHHH
Q 005678 458 YN------IHKTLV----HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAV--LKATP----VLPEREARIIIVQIFQGL 521 (683)
Q Consensus 458 i~------il~~L~----HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~--L~~~~----~Lse~~~~~I~~qIa~aL 521 (683)
+. .+.++. +.+.+.+-.+|..-....+|||||+.|+.+.++ +...+ .+.+..+..++.|++
T Consensus 201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif--- 277 (537)
T PRK04750 201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF--- 277 (537)
T ss_pred hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH---
Confidence 33 333332 333333222332223345799999999999875 33333 244555555555554
Q ss_pred HHHHhcCCceEecccCCcceEeCCCC----cEEEEecCCccccccC
Q 005678 522 IYLNKRAQKIIHYDLKPGNVLFDEFG----VAKVTDFGLSKIVEDD 563 (683)
Q Consensus 522 ~yLH~~g~~IIHrDLKP~NILLd~~g----~vKL~DFGls~~~~~~ 563 (683)
.. +++|+|+||+||+++.+| .++++|||++..++..
T Consensus 278 ----~~--GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 278 ----RD--GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred ----hC--CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 23 499999999999999887 9999999999877543
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.30 E-value=2.3e-11 Score=121.94 Aligned_cols=145 Identities=16% Similarity=0.105 Sum_probs=101.1
Q ss_pred EEecccCceEEEEEEEcc------CCeEEEEEEeccCcccchhh-------------------HHHHHHHHHHHHHHHhh
Q 005678 409 NLLGKGGFSEVYKAYDLV------EHRYVACKLHGLNAQWSEDK-------------------KQSYIRHAIREYNIHKT 463 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~------~g~~VAVKi~~~~~~~~~~~-------------------~~~~i~~~~rEi~il~~ 463 (683)
..||.|--+.||.|.... .+..+|||++......-... ......-+.+|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999997543 35899999987653321100 11111123479999999
Q ss_pred cCC--CceeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCceEecccCCcc
Q 005678 464 LVH--HHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYL-NKRAQKIIHYDLKPGN 540 (683)
Q Consensus 464 L~H--pnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yL-H~~g~~IIHrDLKP~N 540 (683)
+.. -++..++++ ..-+|||||+.+..+....-....++......++.+++.+|.+| |..+ |||+||+|.|
T Consensus 83 l~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~g--lVHGDLs~~N 155 (197)
T cd05146 83 MQKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECN--LVHADLSEYN 155 (197)
T ss_pred HHHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHH
Confidence 853 455555543 23468999997654432222222456666777889999999999 7755 9999999999
Q ss_pred eEeCCCCcEEEEecCCccccc
Q 005678 541 VLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 541 ILLd~~g~vKL~DFGls~~~~ 561 (683)
||++. +.++|+|||.+....
T Consensus 156 IL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 156 MLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred EEEEC-CcEEEEECCCceeCC
Confidence 99974 789999999887554
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.29 E-value=5.1e-11 Score=134.97 Aligned_cols=170 Identities=22% Similarity=0.246 Sum_probs=128.4
Q ss_pred EEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecccCCChhHHHh
Q 005678 421 KAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLK 500 (683)
Q Consensus 421 ka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~ 500 (683)
.|..+.++.+|.|..+..... .....+.+-+.-++.++||||++++++++ ..+.+|||+|-+ -.|..+++
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~-------~~~~~~~~A~k~lKtlRHP~Il~yL~t~e-~~~~~ylvTErV--~Pl~~~lk 99 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG-------EVTELAKRAVKRLKTLRHPNILSYLDTTE-EEGTLYLVTERV--RPLETVLK 99 (690)
T ss_pred ccceeccCCceEEEEEeCCCc-------hhhHHHHHHHHHhhhccCchhhhhhhhhc-ccCceEEEeecc--ccHHHHHH
Confidence 466678899999998865432 22344567788899999999999999997 556899999998 47888887
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCc
Q 005678 501 ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYW 580 (683)
Q Consensus 501 ~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~ 580 (683)
.- +.......+.||+.||.|||..+ +++|++|.-+-|+++..|..||++|-++......... .....--..
T Consensus 100 ~l---~~~~v~~Gl~qIl~AL~FL~~d~-~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~-----~~~~~~~~s 170 (690)
T KOG1243|consen 100 EL---GKEEVCLGLFQILAALSFLNDDC-NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP-----AKSLYLIES 170 (690)
T ss_pred Hh---HHHHHHHHHHHHHHHHHHHhccC-CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc-----cccchhhhc
Confidence 64 46777788999999999999764 7999999999999999999999999988654332110 000111223
Q ss_pred cCCcccccccCCCCCCchhHHHHHHHHHHHHHcC
Q 005678 581 YLPPECFELSKTPLISSKVDVWSAGILFYQMLFG 614 (683)
Q Consensus 581 Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG 614 (683)
|..|+.+... ....|.|-|||++|+++.|
T Consensus 171 ~~~P~~~~~s-----~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 171 FDDPEEIDPS-----EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccChhhcCcc-----ccchhhhhHHHHHHHHhCc
Confidence 6677654321 1346999999999999998
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.28 E-value=1.5e-11 Score=118.14 Aligned_cols=129 Identities=19% Similarity=0.177 Sum_probs=93.7
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceee-eccccccCCceEEEE
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVR-LWDTFEIDQNTFCTV 486 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~-L~~~f~~d~~~~~LV 486 (683)
++.|+.|.++.||++.. .+..|++|+....... ...+..|+.++..+.+.++++ ++..+ ....++|
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~P~~~~~~---~~~~~lv 69 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTEL--------LINRENEAENSKLAAEAGIGPKLYYFD---PETGVLI 69 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCccc--------ccCHHHHHHHHHHHHHhCCCCceEEEe---CCCCeEE
Confidence 46789999999999964 4788999987543210 113456888888886655544 44332 2335799
Q ss_pred EecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCC---ceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 487 LEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQ---KIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 487 ~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~---~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
|||++|.++... . . ....++.+++.+|..||..+. .++|+|++|.||+++ ++.++|+|||.+.
T Consensus 70 ~e~i~G~~l~~~----~-~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 70 TEFIEGSELLTE----D-F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred EEecCCCccccc----c-c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999999887653 0 1 123456799999999998642 369999999999999 6789999999875
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.12 E-value=5.7e-11 Score=133.23 Aligned_cols=251 Identities=20% Similarity=0.228 Sum_probs=178.2
Q ss_pred cccceeEEEEecccCceEEEEEEEc-cCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceeeecccccc
Q 005678 401 LNHRYALLNLLGKGGFSEVYKAYDL-VEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVRLWDTFEI 478 (683)
Q Consensus 401 ~~~ry~l~~~LGkGgfG~Vyka~d~-~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~L~~~f~~ 478 (683)
....|.++..||.|.|+.||.+... .++..|++|-........... ...+.|+.+...+ .|.+++.++..|.
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-----i~sl~ev~l~~~l~~~~~~~g~~~~W~- 336 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-----IFSLGEVILEAILGSHLPSVGKNSSWS- 336 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-----hcchhhhhHhhHhhcccccCCCCCCcc-
Confidence 3456888999999999999987644 678889999664443332221 1234566666665 4889999888886
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC-CcEEEEecCCc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF-GVAKVTDFGLS 557 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~-g~vKL~DFGls 557 (683)
.....|+-.|||.++++...+.-...+.+...+.+..|++.++.++|+.. ++|+|+||+||++..+ +..++.|||+.
T Consensus 337 ~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~--~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 337 QLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL--FVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred ccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh--hhcccccccceeeccchhhhhccccccc
Confidence 44556689999999998887755556888899999999999999999855 9999999999999876 88999999988
Q ss_pred cccccCcCCCcccccccCCCCCccCC-cccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHh
Q 005678 558 KIVEDDVGSQGMELTSQGAGTYWYLP-PECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKA 636 (683)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~GT~~Y~A-PE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~ 636 (683)
..+..... ...++-++.| +|.+.. ...+-.+.|++|||+.+.+.++|... ........ .+
T Consensus 415 t~~~~~~~--------~~~~~~r~~p~~~~~~e--~~~~~~~~~~~sl~~~~~e~~~~~~l-s~~~~~~~-----~i--- 475 (524)
T KOG0601|consen 415 TRLAFSSG--------VFHHIDRLYPIAEILLE--DYPHLSKADIFSLGLSVDEAITGSPL-SESGVQSL-----TI--- 475 (524)
T ss_pred cccceecc--------cccccccccccchhhcc--ccccccccccccccccccccccCccc-Ccccccce-----ee---
Confidence 64322111 0123334442 444332 22367799999999999999987632 22211110 01
Q ss_pred hccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 005678 637 RKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 678 (683)
Q Consensus 637 ~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l 678 (683)
..-..|..+..+..+..+...++..++..||.+.++..|+=|
T Consensus 476 ~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 476 RSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred ecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 111234445566788899999999999999999999887643
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.08 E-value=4.9e-09 Score=116.00 Aligned_cols=213 Identities=19% Similarity=0.208 Sum_probs=155.5
Q ss_pred ceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeecccccc---CCceEEEEEecccC
Q 005678 416 FSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEI---DQNTFCTVLEYCSG 492 (683)
Q Consensus 416 fG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~---d~~~~~LV~Ey~~g 492 (683)
-.+.|+++...+|..|++|.++.+..-...+. ..-+++++++.|+|||++.++|.. +...+++||+|+|+
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~-------t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~ 361 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKD-------TSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS 361 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccc-------hHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence 35789999999999999998854433333222 224678899999999999988852 46689999999997
Q ss_pred -CChhHHHhc---------------CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCC
Q 005678 493 -KDLDAVLKA---------------TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 493 -gsL~~~L~~---------------~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGl 556 (683)
++|.++... +..+++..+|.++.|+..||.++|+.| +..+-|.|.+||++.+-.++|..+|+
T Consensus 362 s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG--LAck~L~~~kIlv~G~~RIriS~C~i 439 (655)
T KOG3741|consen 362 SPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG--LACKTLDLKKILVTGKMRIRISGCGI 439 (655)
T ss_pred CchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC--ceeecccHhHeEeeCcceEEEecccc
Confidence 677766521 124788999999999999999999977 88899999999999888999998888
Q ss_pred ccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCchHHHHHHHHHHHH
Q 005678 557 SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRP-FGHDQTQERILREDTIIK 635 (683)
Q Consensus 557 s~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~P-F~~~~~~e~il~~~~i~~ 635 (683)
...+..+.+ +-+.. -.+-|.=.||.+++.|.||..- +.....+..-+. .+
T Consensus 440 ~Dvl~~d~~-------------------~~le~------~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~--~I-- 490 (655)
T KOG3741|consen 440 MDVLQEDPT-------------------EPLES------QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLT--RI-- 490 (655)
T ss_pred eeeecCCCC-------------------cchhH------HhhhhHHHHHHHHHHHhhcccccccccchHHHHHH--Hh--
Confidence 776654320 11221 2256999999999999999633 222222221111 11
Q ss_pred hhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 005678 636 ARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQD 675 (683)
Q Consensus 636 ~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~h 675 (683)
.+.++.++.++|.-+...++++ -++.+++.+
T Consensus 491 --------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 491 --------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred --------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 1347788999999999888886 677777654
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07 E-value=1.1e-09 Score=107.96 Aligned_cols=136 Identities=21% Similarity=0.240 Sum_probs=97.5
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcc-cchhhHHHHHHHHHHHHHHHhhcCCCce--eeeccccccCCceEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQ-WSEDKKQSYIRHAIREYNIHKTLVHHHI--VRLWDTFEIDQNTFCT 485 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~-~~~~~~~~~i~~~~rEi~il~~L~HpnI--V~L~~~f~~d~~~~~L 485 (683)
.++++|+-+.+|.+. .-|..+.+|.-..... -+.....-....-.+|..++..+.--.| ..+|+ .+.+...|
T Consensus 2 ~~i~~GAEa~i~~~~--~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~d---vD~~~~~I 76 (204)
T COG3642 2 DLIKQGAEAIIYLTD--FLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYD---VDPDNGLI 76 (204)
T ss_pred chhhCCcceeEEeee--ccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEE---EcCCCCEE
Confidence 357899999999994 3555677775322211 1222222223456789999998864433 33333 35677789
Q ss_pred EEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 486 VLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 486 V~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
+|||++|..|.+++... ...++..+-.-+.-||..| |||+||.++||++.. +.+.++||||+.+
T Consensus 77 ~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~g--ivHGDLTtsNiIl~~-~~i~~IDfGLg~~ 140 (204)
T COG3642 77 VMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAG--IVHGDLTTSNIILSG-GRIYFIDFGLGEF 140 (204)
T ss_pred EEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcC--eecCCCccceEEEeC-CcEEEEECCcccc
Confidence 99999999999998765 2456777888889999966 999999999999987 4499999999874
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.06 E-value=1.3e-09 Score=108.80 Aligned_cols=143 Identities=23% Similarity=0.254 Sum_probs=105.0
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCC--ceeeeccccccCC--ceEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHH--HIVRLWDTFEIDQ--NTFC 484 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hp--nIV~L~~~f~~d~--~~~~ 484 (683)
+.||.|.++.||++.. .+|..+++|+....... .....+..|+.++..+.+. ++.+++.+..... +..+
T Consensus 4 ~~l~~G~~n~~~~v~~-~~g~~~ilK~~~~~~~~------~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~ 76 (223)
T cd05154 4 RQLSGGQSNLTYLLTA-GGGRRLVLRRPPPGALL------PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPF 76 (223)
T ss_pred eecCCCccceEEEEEe-cCCcceEEEeCCCcccC------cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCce
Confidence 6789999999999975 33578999986543221 0123567899999998753 3455665543211 3568
Q ss_pred EEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 005678 485 TVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKR------------------------------------- 527 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~------------------------------------- 527 (683)
+||||++|.+|...+.. ..+++.....++.+++.+|.+||+.
T Consensus 77 ~v~e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (223)
T cd05154 77 YVMERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP 155 (223)
T ss_pred EEEEEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence 99999999988876542 3467777778888888888888842
Q ss_pred -----------------CCceEecccCCcceEeCC--CCcEEEEecCCccc
Q 005678 528 -----------------AQKIIHYDLKPGNVLFDE--FGVAKVTDFGLSKI 559 (683)
Q Consensus 528 -----------------g~~IIHrDLKP~NILLd~--~g~vKL~DFGls~~ 559 (683)
...+||+|+.|.|||++. ++.+.|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 134899999999999998 67789999998753
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.89 E-value=2e-08 Score=98.81 Aligned_cols=149 Identities=19% Similarity=0.153 Sum_probs=103.2
Q ss_pred EEEEecccCceEEEEEEEccCCeEEEEEEeccCcc-cchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEEE
Q 005678 407 LLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQ-WSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCT 485 (683)
Q Consensus 407 l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~-~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~L 485 (683)
.+.+|-+|+-+.|+++ ...|+.+.||.-..... -+....+-..+.-.+|...+.++.--.|...--+| .|...-+|
T Consensus 11 ~l~likQGAEArv~~~--~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~-~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRG--SFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIF-IDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeee--ccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE-EecCCCeE
Confidence 5678899999999999 57888888884322211 12222233345667889998888644433222123 25555678
Q ss_pred EEecccC-CChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC---cEEEEecCCccc
Q 005678 486 VLEYCSG-KDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG---VAKVTDFGLSKI 559 (683)
Q Consensus 486 V~Ey~~g-gsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g---~vKL~DFGls~~ 559 (683)
+|||++| .++.+++... ..........++..|-..|.-||..+ |||+||..+||+|..+| .+.|+|||++..
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd--iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND--IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC--eecccccccceEEecCCCcCceEEEeecchhc
Confidence 9999977 5788887433 22333334678899999999999855 99999999999998655 358999999864
Q ss_pred c
Q 005678 560 V 560 (683)
Q Consensus 560 ~ 560 (683)
-
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 3
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.88 E-value=5e-08 Score=105.81 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=154.8
Q ss_pred eEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhc-CCCceee--------ecccc
Q 005678 406 ALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTL-VHHHIVR--------LWDTF 476 (683)
Q Consensus 406 ~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L-~HpnIV~--------L~~~f 476 (683)
.....||+||.+.+|-.- .-+-.+.|+++....-... .-+..|... .||-+-. |||.-
T Consensus 14 ~~gr~LgqGgea~ly~l~---e~~d~VAKIYh~Pppa~~a----------qk~a~la~~p~~p~~~~rvaWPqa~L~G~~ 80 (637)
T COG4248 14 PPGRPLGQGGEADLYTLG---EVRDQVAKIYHAPPPAAQA----------QKVAELAATPDAPLLNYRVAWPQATLHGGR 80 (637)
T ss_pred CCCccccCCccceeeecc---hhhchhheeecCCCchHHH----------HHHHHhccCCCCcchhhhhcccHHHhhCCC
Confidence 345779999999999662 2233455776554321111 122233333 4553322 33321
Q ss_pred ccCCceEEEEEecccCC-ChhHHH------hcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcE
Q 005678 477 EIDQNTFCTVLEYCSGK-DLDAVL------KATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVA 549 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~gg-sL~~~L------~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~v 549 (683)
......++|..++|. ....++ ...+...|..+.+.++.++.+...||..| .+-+|+.++|+|+.+++.+
T Consensus 81 --~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~~~V 156 (637)
T COG4248 81 --RGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDDSKV 156 (637)
T ss_pred --ccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecCceE
Confidence 233467888888774 233333 23356889999999999999999999977 8899999999999999999
Q ss_pred EEEecCCccccccCcCCCcccccccCCCCCccCCcccccccC--CCCCCchhHHHHHHHHHHHHHcC-CCCCCCC-----
Q 005678 550 KVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSK--TPLISSKVDVWSAGILFYQMLFG-RRPFGHD----- 621 (683)
Q Consensus 550 KL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~--~~~~s~ksDVWSLGvILyELLtG-~~PF~~~----- 621 (683)
.|.|-....+-.++ .....++|.+.|+|||.-.... .-.-+...|.|.|||++|++|.| ++||...
T Consensus 157 ~LVdsDsfqi~~ng------~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ 230 (637)
T COG4248 157 VLVDSDSFQINANG------TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD 230 (637)
T ss_pred EEEcccceeeccCC------ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC
Confidence 99985433322211 3456779999999999754211 11246678999999999999986 9999542
Q ss_pred --chHHHHHHHHHHHHh---hc-cC----CCCCcCCCHHHHHHHHHhccc--CCCCCCCHHHH
Q 005678 622 --QTQERILREDTIIKA---RK-VE----FPSRPAVSNEAKDLIRRCLTY--NQAERPDVLTL 672 (683)
Q Consensus 622 --~~~e~il~~~~i~~~---~~-~~----~p~~~~~s~el~dLI~rCL~~--dP~kRPS~~eL 672 (683)
...+.-+........ .. .. -+...-+++++..+..+|++. ++.-||+++..
T Consensus 231 ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW 293 (637)
T COG4248 231 APNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAW 293 (637)
T ss_pred CCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHH
Confidence 122211111110000 00 00 111245788999999999964 46789997654
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.87 E-value=2.2e-08 Score=99.96 Aligned_cols=132 Identities=25% Similarity=0.310 Sum_probs=84.1
Q ss_pred EEEEEEEccCCeEEEEEEeccCcccch-------------------hhHHHHHHHHHHHHHHHhhcCCC--ceeeecccc
Q 005678 418 EVYKAYDLVEHRYVACKLHGLNAQWSE-------------------DKKQSYIRHAIREYNIHKTLVHH--HIVRLWDTF 476 (683)
Q Consensus 418 ~Vyka~d~~~g~~VAVKi~~~~~~~~~-------------------~~~~~~i~~~~rEi~il~~L~Hp--nIV~L~~~f 476 (683)
.||.|.. .+|.+||||++......-. ...........+|+..|..+..- ++..++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899975 6788999999876432211 01112234567899999999765 455555432
Q ss_pred ccCCceEEEEEeccc--CCChhHHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCceEecccCCcceEeCCCCcEEEEe
Q 005678 477 EIDQNTFCTVLEYCS--GKDLDAVLKATPVLPEREARIIIVQIFQGLIY-LNKRAQKIIHYDLKPGNVLFDEFGVAKVTD 553 (683)
Q Consensus 477 ~~d~~~~~LV~Ey~~--ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~y-LH~~g~~IIHrDLKP~NILLd~~g~vKL~D 553 (683)
. -+|||||++ |..+..+.... ++......++.+++..+.. +|..| |||+||.+.|||++++ .+.|+|
T Consensus 80 ---~--~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 ---R--NVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAG--IVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ---T--TEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTT--EEESS-STTSEEEETT-CEEE--
T ss_pred ---C--CEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcC--ceecCCChhhEEeecc-eEEEEe
Confidence 2 259999998 66665544322 2355667788888886666 46655 9999999999999985 999999
Q ss_pred cCCcccc
Q 005678 554 FGLSKIV 560 (683)
Q Consensus 554 FGls~~~ 560 (683)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9988654
No 450
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=1.7e-09 Score=123.23 Aligned_cols=159 Identities=18% Similarity=0.267 Sum_probs=112.4
Q ss_pred HHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccccCcCC----CcccccccCCCCCccCCcccccccC
Q 005678 516 QIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGS----QGMELTSQGAGTYWYLPPECFELSK 591 (683)
Q Consensus 516 qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~----~~~~l~~~~~GT~~Y~APE~~~~~~ 591 (683)
+++.|+.|+|.. .++||++|.|.+|.++.+|..||+.|+++........- ..+.+.....-...|.|||++....
T Consensus 107 ~v~dgl~flh~s-Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRS-AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred cccchhhhhccC-cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 445999999986 47999999999999999999999999988655432110 0111122223456699999986533
Q ss_pred CCCCCchhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHH
Q 005678 592 TPLISSKVDVWSAGILFYQMLF-GRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVL 670 (683)
Q Consensus 592 ~~~~s~ksDVWSLGvILyELLt-G~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~ 670 (683)
.+.++|+||+||++|.+.. |+.-|........ +. ........-.+.....++.++.+=+.+++..++.-||++.
T Consensus 186 ---~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~~-~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~ 260 (700)
T KOG2137|consen 186 ---NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-YS-FSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLD 260 (700)
T ss_pred ---ccccccceeeeeEEEEEecCCcchhhccCCcch-hh-hhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchh
Confidence 6789999999999999995 4444433221111 11 1111122223334467999999999999999999999999
Q ss_pred HHhcCcccCC
Q 005678 671 TLAQDPYLTY 680 (683)
Q Consensus 671 eLl~hP~l~~ 680 (683)
.+...|||+-
T Consensus 261 ~l~~~~ff~D 270 (700)
T KOG2137|consen 261 LLLSIPFFSD 270 (700)
T ss_pred hhhcccccCC
Confidence 9999999974
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.75 E-value=4.8e-08 Score=101.49 Aligned_cols=143 Identities=27% Similarity=0.282 Sum_probs=97.9
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhh--HH-------------HHHHHHHHHHHHHhhcCCC--
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDK--KQ-------------SYIRHAIREYNIHKTLVHH-- 467 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~--~~-------------~~i~~~~rEi~il~~L~Hp-- 467 (683)
+.+...||-|--|.||.|.+ ..|.++|||++......-... .. .....+.+|+.+|..|.--
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 56778999999999999986 478999999986653221100 00 1123577899999998543
Q ss_pred ceeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC
Q 005678 468 HIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 468 nIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g 547 (683)
.+...++. +.=++||||++|..|...- ++......|+..|+.-+.-+-..| |||+|+++-|||++++|
T Consensus 172 ~VP~P~~~-----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~G--iVHGDlSefNIlV~~dg 239 (304)
T COG0478 172 KVPKPIAW-----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRG--IVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCCcccc-----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcC--ccccCCchheEEEecCC
Confidence 45555532 3346899999987665542 123333344444444444444444 99999999999999999
Q ss_pred cEEEEecCCcccc
Q 005678 548 VAKVTDFGLSKIV 560 (683)
Q Consensus 548 ~vKL~DFGls~~~ 560 (683)
.+.++||--+...
T Consensus 240 ~~~vIDwPQ~v~~ 252 (304)
T COG0478 240 DIVVIDWPQAVPI 252 (304)
T ss_pred CEEEEeCcccccC
Confidence 9999999766543
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.73 E-value=1.1e-07 Score=100.22 Aligned_cols=137 Identities=18% Similarity=0.058 Sum_probs=92.0
Q ss_pred EEEEEEEccCCeEEEEEEeccCcccchhhHH-----HHHHHHHHHHHHHhhcCCCcee--eecccccc--C--CceEEEE
Q 005678 418 EVYKAYDLVEHRYVACKLHGLNAQWSEDKKQ-----SYIRHAIREYNIHKTLVHHHIV--RLWDTFEI--D--QNTFCTV 486 (683)
Q Consensus 418 ~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~-----~~i~~~~rEi~il~~L~HpnIV--~L~~~f~~--d--~~~~~LV 486 (683)
.|+++ ...|+.|.||.+... .|....+. .-...+.+|+..+..|..-+|. .+..+++. + ...-+||
T Consensus 37 rvvr~--~~~g~~~~vKr~~~~-~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 37 RTLRF--ELAGKSYFLKWHRGT-GWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred eEEEE--EECCEEEEEEEecCC-cHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 35565 356788999976332 22111110 0011477888888877432222 22222221 1 2346799
Q ss_pred EecccCC-ChhHHHhc--CCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC-------CCcEEEEecCC
Q 005678 487 LEYCSGK-DLDAVLKA--TPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-------FGVAKVTDFGL 556 (683)
Q Consensus 487 ~Ey~~gg-sL~~~L~~--~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-------~g~vKL~DFGl 556 (683)
||++++. +|.+++.. ....+......++.+++..+.-||..| |+|+|++|+|||++. ++.+.|+||+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G--i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG--INHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 9999886 89998853 234566777889999999999999966 999999999999975 46899999998
Q ss_pred ccc
Q 005678 557 SKI 559 (683)
Q Consensus 557 s~~ 559 (683)
+..
T Consensus 192 ~~~ 194 (268)
T PRK15123 192 AQI 194 (268)
T ss_pred ccc
Confidence 853
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.57 E-value=5.4e-07 Score=90.96 Aligned_cols=106 Identities=21% Similarity=0.192 Sum_probs=79.7
Q ss_pred HHHHHHHHHhhcCC-----CceeeeccccccCCceEEEEEecccCC-ChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHh
Q 005678 453 HAIREYNIHKTLVH-----HHIVRLWDTFEIDQNTFCTVLEYCSGK-DLDAVLKATPVLPEREARIIIVQIFQGLIYLNK 526 (683)
Q Consensus 453 ~~~rEi~il~~L~H-----pnIV~L~~~f~~d~~~~~LV~Ey~~gg-sL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~ 526 (683)
.+.+|...+..|.. |.+|-+...-.......+||+|++++. +|.+++.....++......++.+++..+.-||.
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~ 136 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHD 136 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 56777777777743 333332211110113457999999884 899999875557777888999999999999999
Q ss_pred cCCceEecccCCcceEeCCCC---cEEEEecCCcccc
Q 005678 527 RAQKIIHYDLKPGNVLFDEFG---VAKVTDFGLSKIV 560 (683)
Q Consensus 527 ~g~~IIHrDLKP~NILLd~~g---~vKL~DFGls~~~ 560 (683)
.| |+|+|++|.|||++.++ .+.|+||+-++..
T Consensus 137 ~g--i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 137 AG--IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred Cc--CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 66 99999999999999876 8999999987643
No 454
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.47 E-value=1.8e-06 Score=89.09 Aligned_cols=144 Identities=22% Similarity=0.223 Sum_probs=96.0
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHH------------------HHHHHHHHHHhhcC--CC
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYI------------------RHAIREYNIHKTLV--HH 467 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i------------------~~~~rEi~il~~L~--Hp 467 (683)
...|..|--+.||+|.. .++.+||+|++......... ...++ .=...|+.-|+++. +-
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~-~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV 130 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKR-IRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV 130 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhh-HHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 44677888889999963 67899999998765443221 11111 11345777777763 34
Q ss_pred ceeeeccccccCCceEEEEEecccCCChh-HHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC
Q 005678 468 HIVRLWDTFEIDQNTFCTVLEYCSGKDLD-AVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF 546 (683)
Q Consensus 468 nIV~L~~~f~~d~~~~~LV~Ey~~ggsL~-~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~ 546 (683)
.+.+-++++. -.|||||++...+- -.|+.- .+...++..+..+++..+.-|-.. .++||+||+.-|||+. +
T Consensus 131 rvP~Pi~~~~-----nVLvMEfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~-a~LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 131 RVPEPIAFRN-----NVLVMEFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKE-AGLVHGDLSEYNILVH-D 202 (268)
T ss_pred CCCCceeecC-----CeEEEEeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHh-cCcccccchhhheEEE-C
Confidence 4455554432 35899999553111 112222 233446778888898888888763 2599999999999999 7
Q ss_pred CcEEEEecCCccccc
Q 005678 547 GVAKVTDFGLSKIVE 561 (683)
Q Consensus 547 g~vKL~DFGls~~~~ 561 (683)
+.+.|+|||-|....
T Consensus 203 ~~p~iID~~QaV~~~ 217 (268)
T COG1718 203 GEPYIIDVSQAVTID 217 (268)
T ss_pred CeEEEEECccccccC
Confidence 999999999887554
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.41 E-value=1.4e-06 Score=99.36 Aligned_cols=148 Identities=16% Similarity=0.212 Sum_probs=93.1
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHH---------------------------HHH------HHH
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQS---------------------------YIR------HAI 455 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~---------------------------~i~------~~~ 455 (683)
..|+.++-|.||+|.. .+|+.||||+.+++....-..+-. +.+ .+.
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 5689999999999984 569999999987764321111111 111 134
Q ss_pred HHHHHHhhcC-----CCceeeeccccccCCceEEEEEecccCCChhHHH--hcCCCcchHHHHHHHHHHHHHHHHHHhcC
Q 005678 456 REYNIHKTLV-----HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVL--KATPVLPEREARIIIVQIFQGLIYLNKRA 528 (683)
Q Consensus 456 rEi~il~~L~-----HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L--~~~~~Lse~~~~~I~~qIa~aL~yLH~~g 528 (683)
+|..-+.+++ .|+|. +=.+|..-.+.-+++|||++|..+.+.. +. ..++...+.....+++--.-+-|
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~-VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~~q~~~d--- 284 (517)
T COG0661 210 REAANAERFRENFKDDPDVY-VPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFLRQLLRD--- 284 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeE-eceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHHHHHHhc---
Confidence 4555555542 33322 1122222234556999999999998884 44 33554443333333222222222
Q ss_pred CceEecccCCcceEeCCCCcEEEEecCCccccccC
Q 005678 529 QKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDD 563 (683)
Q Consensus 529 ~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~ 563 (683)
+++|.|..|+||+++.+|.+.+.|||+...++..
T Consensus 285 -gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 285 -GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred -CccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 4999999999999999999999999998776543
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.26 E-value=6.9e-06 Score=83.37 Aligned_cols=141 Identities=12% Similarity=-0.007 Sum_probs=97.7
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEecc--CcccchhhHHHHHHHHHHHHHHHhhcCCCc--eeeeccccccC----Cce
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGL--NAQWSEDKKQSYIRHAIREYNIHKTLVHHH--IVRLWDTFEID----QNT 482 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~--~~~~~~~~~~~~i~~~~rEi~il~~L~Hpn--IV~L~~~f~~d----~~~ 482 (683)
-|+||.|-|+... ..|..+-+|.-.. ...+.. ..-...|.+|+..+..|..-+ +.+.. ++... ...
T Consensus 26 ~~rgG~SgV~r~~--~~g~~~ylKrq~nhl~~s~r~---P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~r 99 (216)
T PRK09902 26 YRRNGMSGVQCVE--RNGKKLYVKRMTHHLFHSVRY---PFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWR 99 (216)
T ss_pred cCCCCcceEEEEE--eCCcEEEEEeccCcccccccC---CCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceE
Confidence 3779999999874 3444677886431 111110 112357888999888885332 33333 22111 223
Q ss_pred EEEEEecccC-CChhHHHhcC--CCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCc--EEEEecCCc
Q 005678 483 FCTVLEYCSG-KDLDAVLKAT--PVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGV--AKVTDFGLS 557 (683)
Q Consensus 483 ~~LV~Ey~~g-gsL~~~L~~~--~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~--vKL~DFGls 557 (683)
-+||+|-++| .+|.+++... .+.+......++.+|+.+|.-||..| +.|+|+-+.|||++..|. ++++||--+
T Consensus 100 A~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G--v~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 100 ALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN--RQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 6689997754 6899988654 34577777899999999999999976 999999999999986666 999999866
Q ss_pred cc
Q 005678 558 KI 559 (683)
Q Consensus 558 ~~ 559 (683)
+.
T Consensus 178 r~ 179 (216)
T PRK09902 178 RR 179 (216)
T ss_pred ch
Confidence 54
No 457
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.22 E-value=1.6e-05 Score=81.14 Aligned_cols=147 Identities=17% Similarity=0.242 Sum_probs=91.7
Q ss_pred ccccceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHH--HHHHHHHHHHhhcC---CCceeeecc
Q 005678 400 ILNHRYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYI--RHAIREYNIHKTLV---HHHIVRLWD 474 (683)
Q Consensus 400 i~~~ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i--~~~~rEi~il~~L~---HpnIV~L~~ 474 (683)
++...|.+.+.+-.....-|.+. ..+|..+.+|.......-....-.+.+ ..+.+.+..+..+. -..+..++.
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 46778888888887777777766 467788999976432211111111110 11233444343432 223333222
Q ss_pred cccc----CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEE
Q 005678 475 TFEI----DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAK 550 (683)
Q Consensus 475 ~f~~----d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vK 550 (683)
+..- -....++||||++|..|.++.. +++ .+...++.++.-||..| ++|+|+.|+|++++. +.++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~-~~i~ 174 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSN-NGIR 174 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcC--CccCCCCcCcEEEEC-CcEE
Confidence 2210 1245668999999988876642 222 24456778899999977 999999999999996 4599
Q ss_pred EEecCCccc
Q 005678 551 VTDFGLSKI 559 (683)
Q Consensus 551 L~DFGls~~ 559 (683)
++||+..+.
T Consensus 175 iID~~~k~~ 183 (229)
T PF06176_consen 175 IIDTQGKRM 183 (229)
T ss_pred EEECccccc
Confidence 999987653
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.20 E-value=1.4e-05 Score=82.16 Aligned_cols=135 Identities=19% Similarity=0.237 Sum_probs=78.4
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCce--eeeccccccCCceEEEE
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHI--VRLWDTFEIDQNTFCTV 486 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnI--V~L~~~f~~d~~~~~LV 486 (683)
..||.|..+.||+. .+..+++|+..... . .....+|..++..+..-++ .+.+++.. +.+.+.+|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~--~-------~~~i~~E~~~l~~l~~~glpvP~~~~~~~-~~~~~glv 72 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF--D-------KETIKREFDASRKVFSLGIPTPHPFDLVE-DGGRLGLI 72 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC--C-------HHHHHHHHHHHHHHHHcCCCCCceEEEEe-cCCeeeee
Confidence 56899999999984 24467789875422 1 1234678888888754333 34444443 45667899
Q ss_pred EecccCCC-hhHHH---------------------hcC--CCcchHHHH-HHHH----------HHHH-HHHHHH--hcC
Q 005678 487 LEYCSGKD-LDAVL---------------------KAT--PVLPEREAR-IIIV----------QIFQ-GLIYLN--KRA 528 (683)
Q Consensus 487 ~Ey~~ggs-L~~~L---------------------~~~--~~Lse~~~~-~I~~----------qIa~-aL~yLH--~~g 528 (683)
||+++|.+ +...+ ... ...+..... .+.. .+.. ...+|. ...
T Consensus 73 ~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~ 152 (226)
T TIGR02172 73 YELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDT 152 (226)
T ss_pred eeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCC
Confidence 99999863 21111 000 001111000 0000 0111 122222 123
Q ss_pred CceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 529 QKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 529 ~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
..++|+|+.|.||++++++ +.|+||+.+.
T Consensus 153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 3589999999999999878 9999999775
No 459
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.12 E-value=2.4e-05 Score=78.07 Aligned_cols=140 Identities=22% Similarity=0.237 Sum_probs=78.7
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCc--eeeeccccc--cCCceE
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHH--IVRLWDTFE--IDQNTF 483 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hpn--IV~L~~~f~--~d~~~~ 483 (683)
++.|+.|..+.||+..... ..+++|+.... .....+.+|..++..+.... +..++.... ......
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~---------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~ 70 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP---------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFP 70 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH---------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC---------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccc
Confidence 5789999999999996433 58999986332 12345567777777774332 344444221 123457
Q ss_pred EEEEecccCCChhH----------------HHh---cC----CCcchHH------HHHH---------------HHHHHH
Q 005678 484 CTVLEYCSGKDLDA----------------VLK---AT----PVLPERE------ARII---------------IVQIFQ 519 (683)
Q Consensus 484 ~LV~Ey~~ggsL~~----------------~L~---~~----~~Lse~~------~~~I---------------~~qIa~ 519 (683)
+++|++++|..+.. .+. .. ..+.... ...+ +..+..
T Consensus 71 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
T PF01636_consen 71 YLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEE 150 (239)
T ss_dssp EEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred eEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHH
Confidence 89999999988877 111 11 1111000 0000 111222
Q ss_pred -HHHHHHh-----cCCceEecccCCcceEeC-CCCcEEEEecCCcc
Q 005678 520 -GLIYLNK-----RAQKIIHYDLKPGNVLFD-EFGVAKVTDFGLSK 558 (683)
Q Consensus 520 -aL~yLH~-----~g~~IIHrDLKP~NILLd-~~g~vKL~DFGls~ 558 (683)
.+..++. ....++|+|+.|.|||++ +++.+.|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 151 RLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 3333332 223599999999999999 66777899998764
No 460
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.11 E-value=1.7e-05 Score=90.54 Aligned_cols=145 Identities=14% Similarity=0.183 Sum_probs=91.1
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHH------------------------HH------HHHHHH
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSY------------------------IR------HAIREY 458 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~------------------------i~------~~~rEi 458 (683)
+.||.-+.|.||+|.. .+|..||||+.+.........+-.. -+ .|.+|.
T Consensus 167 ~piaaASlaQVhrA~L-~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARL-KNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEe-cCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 5689999999999985 5599999999766533211000000 00 123333
Q ss_pred HHH----hhcCCCc------eeeeccccccCCceEEEEEecccCCChhHHH--hcCCCcchHHHHHHHHHHHHHHHHHHh
Q 005678 459 NIH----KTLVHHH------IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVL--KATPVLPEREARIIIVQIFQGLIYLNK 526 (683)
Q Consensus 459 ~il----~~L~Hpn------IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L--~~~~~Lse~~~~~I~~qIa~aL~yLH~ 526 (683)
+-. +.+.|-+ |.++|..+ ....+|+||||+|..+.+.- .+.+ ++...+..-+.++..-+-+.|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~---st~RVLtME~~~G~~i~Dl~~i~~~g-i~~~~i~~~l~~~~~~qIf~~- 320 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL---STKRVLTMEYVDGIKINDLDAIDKRG-ISPHDILNKLVEAYLEQIFKT- 320 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc---CcceEEEEEecCCccCCCHHHHHHcC-CCHHHHHHHHHHHHHHHHHhc-
Confidence 333 3334555 44444333 44677999999998776654 4444 555554444333333333332
Q ss_pred cCCceEecccCCcceEeCC----CCcEEEEecCCcccccc
Q 005678 527 RAQKIIHYDLKPGNVLFDE----FGVAKVTDFGLSKIVED 562 (683)
Q Consensus 527 ~g~~IIHrDLKP~NILLd~----~g~vKL~DFGls~~~~~ 562 (683)
+++|+|-.|+||++.. ++.+.+-|||+...+..
T Consensus 321 ---GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 321 ---GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred ---CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 4999999999999983 67899999999876654
No 461
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.99 E-value=5.1e-05 Score=91.49 Aligned_cols=207 Identities=22% Similarity=0.317 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHhhcCCCceeeeccccccC--Cc-eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhc
Q 005678 451 IRHAIREYNIHKTLVHHHIVRLWDTFEID--QN-TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKR 527 (683)
Q Consensus 451 i~~~~rEi~il~~L~HpnIV~L~~~f~~d--~~-~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~ 527 (683)
+....-|...+....|+|++.++.+--.. .+ ...+..++|...++...+..-+.++....+.+..++..||.|+|..
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 44455578888888999999988654221 11 2224458899999999998888899999999999999999999986
Q ss_pred CCceEecccCCc---ceEeCCCCcEEEE--ecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHH
Q 005678 528 AQKIIHYDLKPG---NVLFDEFGVAKVT--DFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVW 602 (683)
Q Consensus 528 g~~IIHrDLKP~---NILLd~~g~vKL~--DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVW 602 (683)
. ..|.-|..+ +...+..+.+.++ ||+.+...+....... -.-+..|.+||...... ...+...|+|
T Consensus 306 ~--l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~------~~~~~~~~~~e~~~~~~-~~~~r~~dL~ 376 (1351)
T KOG1035|consen 306 S--LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS------DLLAEIRNADEDLKENT-AKKSRLTDLW 376 (1351)
T ss_pred c--cceeEEecccccccccCccceeecchhhhcccccCCCcccchh------hcCcccccccccccccc-chhhhhhHHH
Confidence 3 444444433 3344455666666 8988876654322111 12233466676553222 1123346999
Q ss_pred HHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 005678 603 SAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTYS 681 (683)
Q Consensus 603 SLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~~~ 681 (683)
.+|.++..+..|..+-........++. . .......++..+|+.-++++|+++.+++.|||++..
T Consensus 377 ~lgll~~~~~~~~~i~~~~~~~~~~l~---------~------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKSAVPVSLLD---------V------LSTSELLDALPKCLDEDSEERLSALELLTHPFLRFP 440 (1351)
T ss_pred HHHHHHhhhhhcCcccccccchhhhhc---------c------ccchhhhhhhhhhcchhhhhccchhhhhhchhcccc
Confidence 999999999988765432222111110 0 111167789999999999999999999999998753
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.95 E-value=7.2e-05 Score=76.83 Aligned_cols=135 Identities=16% Similarity=0.076 Sum_probs=77.6
Q ss_pred ecccCc-eEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCceeeeccccccCCceEEEEEe
Q 005678 411 LGKGGF-SEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHIVRLWDTFEIDQNTFCTVLE 488 (683)
Q Consensus 411 LGkGgf-G~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnIV~L~~~f~~d~~~~~LV~E 488 (683)
|-.|.+ ..||+... .+..+.||+..... ...+.+|+.++..+. +--+.++++++. ..+..++||+
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~----------~~~~~~E~~~l~~l~~~~~vP~v~~~~~-~~~~~~lv~e 72 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP----------TYELEREAERLRWLAGKLPVPEVIDYGS-DDGRAWLLTS 72 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCc----------ccchHHHHHHHHHHHhcCCCCeEEEEEe-cCCccEEEEE
Confidence 445555 78999953 34688899864321 123456777777773 333445565554 3456789999
Q ss_pred cccCCChhHHHh-------------------cCC----CcchH--HHHHHHH--------------------HHHHHHHH
Q 005678 489 YCSGKDLDAVLK-------------------ATP----VLPER--EARIIIV--------------------QIFQGLIY 523 (683)
Q Consensus 489 y~~ggsL~~~L~-------------------~~~----~Lse~--~~~~I~~--------------------qIa~aL~y 523 (683)
+++|.+|..... .-+ ++... ....... .+...+..
T Consensus 73 ~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
T cd05150 73 AVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAE 152 (244)
T ss_pred eeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHH
Confidence 999987764310 000 01100 0000000 01111222
Q ss_pred HHh-----cCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 524 LNK-----RAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 524 LH~-----~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
|-. ..+.++|+|+.|.|||+++++.+.|+||+.+.
T Consensus 153 l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 153 LEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 211 12359999999999999997778899999774
No 463
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.93 E-value=2.1e-06 Score=97.53 Aligned_cols=239 Identities=15% Similarity=0.129 Sum_probs=154.5
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCc-eeeeccccccCCceE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHH-IVRLWDTFEIDQNTF 483 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hpn-IV~L~~~f~~d~~~~ 483 (683)
|...+-+++|+++.+|+.+...+...+ .+++... ....-++++|.+++||| .+..++.++ .....
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~------------l~~rl~~eLLdK~n~P~~~v~~~~d~~-~E~~~ 309 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT------------LSRRLAIELLDKVNNPNPVVRYLEDYD-GEDYL 309 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc------------hhhHHHHHHHHHccCCCCcccccccCC-ccccc
Confidence 444556799999999999766555444 5544221 23345788999999999 666666664 45678
Q ss_pred EEEEecccCC-ChhHHH-hcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCccccc
Q 005678 484 CTVLEYCSGK-DLDAVL-KATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVE 561 (683)
Q Consensus 484 ~LV~Ey~~gg-sL~~~L-~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~ 561 (683)
.++++++.++ +-.... ...-.+.......+++.-..+++|||+.. =+|+| ||+..+ +..+..||+....+.
T Consensus 310 ~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~--~~~~d----~~l~s~-~~~~~~~~~v~~~L~ 382 (829)
T KOG0576|consen 310 WIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY--KVHRD----NILGSE-EEVKLLDFAVPPQLT 382 (829)
T ss_pred chhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc--ccCcc----cccccc-cccccccccCCcccC
Confidence 8999999876 222111 11112344445556677778899999842 38888 888776 889999999887665
Q ss_pred cCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhc--c
Q 005678 562 DDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARK--V 639 (683)
Q Consensus 562 ~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELLtG~~PF~~~~~~e~il~~~~i~~~~~--~ 639 (683)
... ......+|+.++|||+..... +....|+|++|+-..+|.-|-+|-......... +.... .
T Consensus 383 ~~~------~~~t~~~~~~~~~pev~~~~~---~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~~~------~g~~p~s~ 447 (829)
T KOG0576|consen 383 RTM------KPRTAIGTPEPLAPEVIQENT---IDGCPDSGSLAVSAIQMAPGLPPRSSPPAVLPM------IGNGPNSP 447 (829)
T ss_pred ccc------ccccCCCCCCCCCchhhcccc---cccCCCccCCCcchhhcCCCCCCCCCCccccCC------CCCCCCcc
Confidence 432 234558999999999876444 788999999998777777777776442211000 00000 0
Q ss_pred CCCCCcCCCHHHH-HHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 640 EFPSRPAVSNEAK-DLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 640 ~~p~~~~~s~el~-dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.+......+.... ++...|+..-|..++....++.|-+|.
T Consensus 448 ~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfn 488 (829)
T KOG0576|consen 448 MLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFN 488 (829)
T ss_pred ccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHHHhc
Confidence 0000000111111 477788888898888888888776664
No 464
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.91 E-value=0.00014 Score=73.39 Aligned_cols=144 Identities=22% Similarity=0.272 Sum_probs=95.6
Q ss_pred CCCCccccccccceeEEEEecccCc-eEEEEEEEccCCeEEEEEEecc---Cccc---ch--------hhHHHHHHHHHH
Q 005678 392 GSRFNNFQILNHRYALLNLLGKGGF-SEVYKAYDLVEHRYVACKLHGL---NAQW---SE--------DKKQSYIRHAIR 456 (683)
Q Consensus 392 ~~~f~~~~i~~~ry~l~~~LGkGgf-G~Vyka~d~~~g~~VAVKi~~~---~~~~---~~--------~~~~~~i~~~~r 456 (683)
+..+..|..-+..+..++.||.|.. |.||++. -.|..||+|++.. .... .. .....+..-|..
T Consensus 26 gPKL~~F~~h~~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ 103 (207)
T PF13095_consen 26 GPKLEPFTHHGDDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNC 103 (207)
T ss_pred CCCcCCcCCCCCcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHH
Confidence 3444444444578999999999999 9999994 6788999999321 1110 00 011134445666
Q ss_pred HHHHHhhc---CCCce--eeeccccccC-----------------CceEEEEEecccCCChhHHHhcCCCcchHHHHHHH
Q 005678 457 EYNIHKTL---VHHHI--VRLWDTFEID-----------------QNTFCTVLEYCSGKDLDAVLKATPVLPEREARIII 514 (683)
Q Consensus 457 Ei~il~~L---~HpnI--V~L~~~f~~d-----------------~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~ 514 (683)
|.+...+| .+.++ |+.||+.-.+ .....||.||.+... .+.. .-+
T Consensus 104 ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~ 170 (207)
T PF13095_consen 104 ECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDI 170 (207)
T ss_pred HHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHH
Confidence 66666666 45555 8888776433 123567888776543 1222 335
Q ss_pred HHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCc
Q 005678 515 VQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS 557 (683)
Q Consensus 515 ~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls 557 (683)
.+|.+-|..+|..| |+-+|+++.|.. .-+|+|||.+
T Consensus 171 ~~~~~dl~~~~k~g--I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 171 PQMLRDLKILHKLG--IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHHHHHHHHCC--eeeccCcccccc-----CCEEEecccC
Confidence 57778888999866 999999999986 4589999864
No 465
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.86 E-value=9.9e-05 Score=75.65 Aligned_cols=29 Identities=38% Similarity=0.552 Sum_probs=25.3
Q ss_pred ceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 530 KIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 530 ~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
.+||+|+.|.|||++.++..-|+||+.+.
T Consensus 165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 49999999999999976666799999875
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=97.76 E-value=0.00027 Score=85.63 Aligned_cols=82 Identities=13% Similarity=0.161 Sum_probs=52.6
Q ss_pred EEEecccCceEEEEEEEccCC--eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC-CCce--eeeccccccC--C
Q 005678 408 LNLLGKGGFSEVYKAYDLVEH--RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV-HHHI--VRLWDTFEID--Q 480 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g--~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~-HpnI--V~L~~~f~~d--~ 480 (683)
+..|+.|.+..+|+......+ ..+++|+......... ...+.+|+.+++.+. |++| .+++.++... .
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~------~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~ 116 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQS------AHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVI 116 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCcc------HHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcC
Confidence 577899999999998653322 3566776533221111 124678999999985 6664 5666555321 1
Q ss_pred ceEEEEEecccCCCh
Q 005678 481 NTFCTVLEYCSGKDL 495 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL 495 (683)
+..|+||||++|..+
T Consensus 117 G~~flVME~v~G~~~ 131 (822)
T PLN02876 117 GTAFYIMEYLEGRIF 131 (822)
T ss_pred CCceEEEEecCCccc
Confidence 467899999988643
No 467
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.70 E-value=0.00013 Score=72.01 Aligned_cols=131 Identities=19% Similarity=0.199 Sum_probs=88.0
Q ss_pred eeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCceeeeccccccCCceEE
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFC 484 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~ 484 (683)
....+.||+|.+|.||+|. ..|.++|+|+-..+.. ...+..|..++..+.--++-+=...+. .+ .
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~--~~~~~~a~Kvrr~ds~---------r~~l~kEakiLeil~g~~~~p~vy~yg--~~--~ 88 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGE--WRGGEVALKVRRRDSP---------RRNLEKEAKILEILAGEGVTPEVYFYG--ED--F 88 (201)
T ss_pred hhhhhhhhcccccEEEEee--ccCceEEEEEecCCcc---------hhhHHHHHHHHHHhhhcCCCceEEEec--hh--h
Confidence 3446789999999999994 6788999998644321 346778999999887666654332221 22 2
Q ss_pred EEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccC-CcceEeCCCCcEEEEecCCccc
Q 005678 485 TVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLK-PGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 485 LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLK-P~NILLd~~g~vKL~DFGls~~ 559 (683)
+.|||+.|..|....... . +.-+..++.+---|-..| |-|..|. |..++|.+++.+.|+||.-|..
T Consensus 89 i~me~i~G~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~G--I~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 89 IRMEYIDGRPLGKLEIGG---D----RKHLLRVLEKAYKLDRLG--IEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhhcCcchhhhhhcc---c----HHHHHHHHHHHHHHHHhc--cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 559999998887765432 1 222334455533344434 8899886 6666666667999999998863
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.68 E-value=0.00034 Score=70.63 Aligned_cols=134 Identities=25% Similarity=0.349 Sum_probs=87.8
Q ss_pred EEecccCceEEEEEEEccCCeEEEEEEeccCcccchh---------hHHHHHHHHHHHHHHHhhcC------CCceeeec
Q 005678 409 NLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSED---------KKQSYIRHAIREYNIHKTLV------HHHIVRLW 473 (683)
Q Consensus 409 ~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~---------~~~~~i~~~~rEi~il~~L~------HpnIV~L~ 473 (683)
..||.|+.-.||.- ......+||+.......... ......+...+|+.....+. +.+|.++|
T Consensus 7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 57999999999976 34556789998766511000 00112344556666666665 78999999
Q ss_pred cccccCCceEEEEEecccC------CChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCC--
Q 005678 474 DTFEIDQNTFCTVLEYCSG------KDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDE-- 545 (683)
Q Consensus 474 ~~f~~d~~~~~LV~Ey~~g------gsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~-- 545 (683)
|..+.+.+ +.+|+|.+.+ .+|.+++.... ++. .....+.++.. ||-. ..|+.+||+|.||++..
T Consensus 84 G~veT~~G-~Glv~e~I~d~dG~~s~TL~~~l~~~~-~~~-~~~~~L~~f~~---~l~~--~~Iv~~dl~~~NIv~~~~~ 155 (199)
T PF10707_consen 84 GFVETNLG-LGLVVELIRDADGNISPTLEDYLKEGG-LTE-ELRQALDEFKR---YLLD--HHIVIRDLNPHNIVVQRRD 155 (199)
T ss_pred EEEecCCc-eEEEEEEEECCCCCcCccHHHHHHcCC-ccH-HHHHHHHHHHH---HHHH--cCCeecCCCcccEEEEecC
Confidence 99875544 4677777543 46888886654 665 55555555544 4444 23999999999999963
Q ss_pred CC--cEEEEe
Q 005678 546 FG--VAKVTD 553 (683)
Q Consensus 546 ~g--~vKL~D 553 (683)
++ .+.|+|
T Consensus 156 ~~~~~lvlID 165 (199)
T PF10707_consen 156 SGEFRLVLID 165 (199)
T ss_pred CCceEEEEEe
Confidence 22 477777
No 469
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.66 E-value=4.7e-05 Score=81.27 Aligned_cols=144 Identities=23% Similarity=0.310 Sum_probs=99.7
Q ss_pred ceeEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhH--HHHH-------------HHHHHHHHHHhhcCC-C
Q 005678 404 RYALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKK--QSYI-------------RHAIREYNIHKTLVH-H 467 (683)
Q Consensus 404 ry~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~--~~~i-------------~~~~rEi~il~~L~H-p 467 (683)
-+.+++.||-|.-+-||.+-+ ..|++.++|++.+...+-...+ ..|. -.+.+|+..|+.|.- -
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 356788899999999999975 5689999998866543322111 1111 135678999998843 2
Q ss_pred c-eeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCC
Q 005678 468 H-IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEF 546 (683)
Q Consensus 468 n-IV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~ 546 (683)
. +.+.+ +.+.-|+|||++.|..|...-.- ..+..+...+..-+.-|..+| +||+|..-.||+++++
T Consensus 172 fpVPkpi-----D~~RH~Vvmelv~g~Pl~~v~~v------~d~~~ly~~lm~~Iv~la~~G--lIHgDFNEFNimv~dd 238 (465)
T KOG2268|consen 172 FPVPKPI-----DHNRHCVVMELVDGYPLRQVRHV------EDPPTLYDDLMGLIVRLANHG--LIHGDFNEFNIMVKDD 238 (465)
T ss_pred CCCCCcc-----cccceeeHHHhhcccceeeeeec------CChHHHHHHHHHHHHHHHHcC--ceecccchheeEEecC
Confidence 2 33333 34456799999998877665321 122335555666666777756 9999999999999999
Q ss_pred CcEEEEecCCccccc
Q 005678 547 GVAKVTDFGLSKIVE 561 (683)
Q Consensus 547 g~vKL~DFGls~~~~ 561 (683)
+.++++||--+....
T Consensus 239 ~~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 239 DKIVVIDFPQMVSTS 253 (465)
T ss_pred CCEEEeechHhhccC
Confidence 999999998665443
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.59 E-value=0.00076 Score=68.68 Aligned_cols=75 Identities=23% Similarity=0.352 Sum_probs=45.6
Q ss_pred EEEecccCceEEEEEEEcc-CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCce-eeeccccccCCceEEE
Q 005678 408 LNLLGKGGFSEVYKAYDLV-EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHI-VRLWDTFEIDQNTFCT 485 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~-~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnI-V~L~~~f~~d~~~~~L 485 (683)
++.|..|-...||++.... .+..|++|+........ -...+|+.++..+...++ ++++..+. . .+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~--------~d~~~E~~~~~~l~~~gl~P~v~~~~~--~---~~ 69 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELI--------IDRERELRIHKLLSKHGLAPKLYATFQ--N---GL 69 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccce--------ecHHHHHHHHHHHHhCCCCCeEEEEeC--C---cE
Confidence 4567778888999985332 25678899865432110 112357778888754333 33443322 2 37
Q ss_pred EEecccCCCh
Q 005678 486 VLEYCSGKDL 495 (683)
Q Consensus 486 V~Ey~~ggsL 495 (683)
||||++|.++
T Consensus 70 l~e~i~G~~l 79 (235)
T cd05157 70 IYEFIPGRTL 79 (235)
T ss_pred EEEeeCCCcC
Confidence 9999999776
No 471
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.51 E-value=0.00032 Score=70.19 Aligned_cols=102 Identities=19% Similarity=0.161 Sum_probs=80.6
Q ss_pred HHHHHHhhcCC-CceeeeccccccCCceEEEEEecccCCChhH---HHhcCCCcchHHHHHHHHHHHHHHHHHHhcCC-c
Q 005678 456 REYNIHKTLVH-HHIVRLWDTFEIDQNTFCTVLEYCSGKDLDA---VLKATPVLPEREARIIIVQIFQGLIYLNKRAQ-K 530 (683)
Q Consensus 456 rEi~il~~L~H-pnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~---~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~-~ 530 (683)
.|.-++..+.+ +++++++|+|. . ++|.||.+.+++.. .+...-..+|..+..|+.+++..+.+|+.... .
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----R-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----C-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 47888888876 69999999984 2 46889998776642 12222346899999999999999999987421 4
Q ss_pred eEecccCCcceEeCCCCcEEEEecCCcccccc
Q 005678 531 IIHYDLKPGNVLFDEFGVAKVTDFGLSKIVED 562 (683)
Q Consensus 531 IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~ 562 (683)
+.-.|++|+|+-++++|.+|++|...+.....
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~~ 114 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVEDK 114 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchhHH
Confidence 88899999999999999999999998765543
No 472
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.48 E-value=0.0018 Score=72.00 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=51.0
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCc-----ccchhhHHHHHHHHHHHHHHHhhcC---CCceeeeccccccC
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNA-----QWSEDKKQSYIRHAIREYNIHKTLV---HHHIVRLWDTFEID 479 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~-----~~~~~~~~~~i~~~~rEi~il~~L~---HpnIV~L~~~f~~d 479 (683)
.+.||-|.+..||++.+...++.|.||.-.... .|.. .......|...|..+. -.+++++|.+ +
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl-----~~eR~~~Eae~L~~l~~~~p~~VPkV~~~---D 102 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPL-----TLDRARIEAEALKIQAKYVPDLVPKVYHY---D 102 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccc-----cHHHHHHHHHHHHHHHhhCCCCCCeEEEE---C
Confidence 467999999999999875444689999743211 1121 1234556777777652 2345666644 3
Q ss_pred CceEEEEEecccCCC
Q 005678 480 QNTFCTVLEYCSGKD 494 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggs 494 (683)
....++||||+++..
T Consensus 103 ~~~~~lVME~L~~~~ 117 (401)
T PRK09550 103 EELAVTVMEDLSDHK 117 (401)
T ss_pred CCCCEEEEecCCCcc
Confidence 455779999998743
No 473
>PRK10593 hypothetical protein; Provisional
Probab=97.47 E-value=0.0016 Score=69.70 Aligned_cols=79 Identities=10% Similarity=0.088 Sum_probs=51.3
Q ss_pred eEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCC---Cceeeecccccc--CC
Q 005678 406 ALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVH---HHIVRLWDTFEI--DQ 480 (683)
Q Consensus 406 ~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~H---pnIV~L~~~f~~--d~ 480 (683)
.-.+.||.|..+.||...+ .++ .+.+|+..... . ...+..|...++.|.- ..+.++++++.. ..
T Consensus 17 ~~~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~~~--~-------~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~ 85 (297)
T PRK10593 17 SRVECISEQPYAALWALYD-SQG-NPMPLMARSFS--T-------PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSP 85 (297)
T ss_pred heeeecCCccceeEEEEEc-CCC-CEEEEEecccc--c-------chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcC
Confidence 3457799999999999853 233 46778753210 1 1246678888877742 346666665532 24
Q ss_pred ceEEEEEecccCCCh
Q 005678 481 NTFCTVLEYCSGKDL 495 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL 495 (683)
+..+||||+++|.++
T Consensus 86 g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 86 GPDVLLLERLRGVSV 100 (297)
T ss_pred CCeEEEEeccCCEec
Confidence 568899999998764
No 474
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.42 E-value=0.001 Score=72.42 Aligned_cols=150 Identities=19% Similarity=0.185 Sum_probs=98.1
Q ss_pred EEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhh------------------HHHHHHH-HHHHHHHHhhcCCC
Q 005678 407 LLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDK------------------KQSYIRH-AIREYNIHKTLVHH 467 (683)
Q Consensus 407 l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~------------------~~~~i~~-~~rEi~il~~L~Hp 467 (683)
+-..|..|--+.||.|. ..+|..+|||+++.+...-... ....++. +-.|+.-|++|...
T Consensus 148 inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 34678889999999996 5678889999986654332111 0011111 34577777777554
Q ss_pred ceeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCC
Q 005678 468 HIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFG 547 (683)
Q Consensus 468 nIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g 547 (683)
.|.-.--+.- .+ -+|||+|+.....-.-.-+.-.++...+..+..+++..+.-|-.. ..+||.||+--|+|+.+ |
T Consensus 227 GIP~PePIlL--k~-hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~-c~LVHADLSEfN~Lyhd-G 301 (520)
T KOG2270|consen 227 GIPCPEPILL--KN-HVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQK-CRLVHADLSEFNLLYHD-G 301 (520)
T ss_pred CCCCCCceee--ec-ceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHH-hceeccchhhhhheEEC-C
Confidence 4322111110 12 248999995433222222333578888888889999998888654 36999999999999987 8
Q ss_pred cEEEEecCCcccccc
Q 005678 548 VAKVTDFGLSKIVED 562 (683)
Q Consensus 548 ~vKL~DFGls~~~~~ 562 (683)
.+.|+|-+-+.-.+.
T Consensus 302 ~lyiIDVSQSVE~DH 316 (520)
T KOG2270|consen 302 KLYIIDVSQSVEHDH 316 (520)
T ss_pred EEEEEEccccccCCC
Confidence 999999887764443
No 475
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.36 E-value=9.9e-05 Score=90.70 Aligned_cols=213 Identities=13% Similarity=-0.011 Sum_probs=137.3
Q ss_pred HHHHHHHHhhcCCCceeeecccccc-CCceEEEEEecccCCChhHHHhcC----CCcchHHHHHHHHHHHHHHHHHHhc-
Q 005678 454 AIREYNIHKTLVHHHIVRLWDTFEI-DQNTFCTVLEYCSGKDLDAVLKAT----PVLPEREARIIIVQIFQGLIYLNKR- 527 (683)
Q Consensus 454 ~~rEi~il~~L~HpnIV~L~~~f~~-d~~~~~LV~Ey~~ggsL~~~L~~~----~~Lse~~~~~I~~qIa~aL~yLH~~- 527 (683)
.+.|..-++...|++++..+.-... .....+.+++|+.+|.+.+.|-++ +.+...-+.....+.+.+..-+|..
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 3445555556789998877654321 234567899999999999999433 3344434444444446666666654
Q ss_pred --CCceEecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHH
Q 005678 528 --AQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAG 605 (683)
Q Consensus 528 --g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLG 605 (683)
|+-.+|++||+-|.+|..+-.+|++++|+.++..... ......++++.|+.|+....-+ ++.++|+|+.|
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~-----sf~Gl~l~sp~~v~qli~N~ik---~t~rsdilr~s 1427 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVL-----SFFGLELCSPIYVLQLIKNEIK---FTKRSDILRRS 1427 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCchH-----hhhhhhhCCHHHHHHHHHHHHh---hhhHHHHHHHH
Confidence 4458999999999999999999999999999544332 2233347888899999876555 67789999999
Q ss_pred HHHHHHHcCCCCCCCCchHHHHHHHHHHHHhhccCCCCCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 606 ILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 606 vILyELLtG~~PF~~~~~~e~il~~~~i~~~~~~~~p~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
+.+|...-|..||..-. ...- +.++..+. .+...--.|.++...+..+|-.....||.....+.-|++-
T Consensus 1428 ~~ly~rs~~n~~fi~fl---q~~L-kgiidn~t-f~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a 1496 (2724)
T KOG1826|consen 1428 LSLYLRSDGNAYFIFFL---QPAL-KGIIDNHT-FFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHFA 1496 (2724)
T ss_pred HHHHHHhcccHHHHHHH---HHHH-cCcccccc-cccccccCCCcccHHHHHHHHHHhhhcchhhhhccccccc
Confidence 99999998888873211 0000 01111111 1111112234444555566666677788877777666553
No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.30 E-value=0.00089 Score=69.45 Aligned_cols=134 Identities=15% Similarity=0.143 Sum_probs=73.4
Q ss_pred ecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCcee-eeccccccCCceEEEEEec
Q 005678 411 LGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIV-RLWDTFEIDQNTFCTVLEY 489 (683)
Q Consensus 411 LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV-~L~~~f~~d~~~~~LV~Ey 489 (683)
+..|-.+.+|+.. .++..+++|+......... -...+|..+++.+...+++ .++..+ . -++||||
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~-------~~r~~E~~~l~~l~~~g~~P~~i~~~---~--~~~v~e~ 69 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALG-------VDRQREYQILQALSALGLAPKPILVN---E--HWLLVEW 69 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCccccccc-------CcHHHHHHHHHHHHhcCCCCceEEEe---C--CEEEEEe
Confidence 4557777899885 5566788897543211110 0234577788877543332 233222 2 2589999
Q ss_pred ccCCChhHH--------------H---hcCC----CcchH-HHHHHHHHH---------HHHHHHHHhc------CCceE
Q 005678 490 CSGKDLDAV--------------L---KATP----VLPER-EARIIIVQI---------FQGLIYLNKR------AQKII 532 (683)
Q Consensus 490 ~~ggsL~~~--------------L---~~~~----~Lse~-~~~~I~~qI---------a~aL~yLH~~------g~~II 532 (683)
++|..+... + ...+ +++.. .+..+..++ ...+..+-.. ...++
T Consensus 70 i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (256)
T TIGR02721 70 LEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPL 149 (256)
T ss_pred ccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeee
Confidence 998765421 1 1111 11111 111111111 1112222111 23599
Q ss_pred ecccCCcceEeCCCCcEEEEecCCccc
Q 005678 533 HYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 533 HrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
|+|+.|.|||++.++ +.|+||..+..
T Consensus 150 H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 150 HMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 999999999999877 78999998753
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.22 E-value=0.0012 Score=69.70 Aligned_cols=140 Identities=18% Similarity=0.108 Sum_probs=78.6
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCc--eeeeccccc-----cCC
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHH--IVRLWDTFE-----IDQ 480 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hpn--IV~L~~~f~-----~d~ 480 (683)
++.|..|....+|+.. ..+..+++|++... . ...+..|+.++..+.+.+ +++++.... ...
T Consensus 19 i~~i~~G~~n~~y~v~--~~~~~~vLr~~~~~---~-------~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~ 86 (296)
T cd05153 19 FEGISAGIENTNYFVT--TDSGRYVLTLFEKV---S-------AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELA 86 (296)
T ss_pred eecccCccccceEEEE--eCCCcEEEEEcCCC---C-------hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeC
Confidence 5667778778999985 34456888987431 1 123444666666664322 334332210 123
Q ss_pred ceEEEEEecccCCChhH----H-------H---h----cCC-------CcchHHHH----------HHHHHHHHHHHHHH
Q 005678 481 NTFCTVLEYCSGKDLDA----V-------L---K----ATP-------VLPEREAR----------IIIVQIFQGLIYLN 525 (683)
Q Consensus 481 ~~~~LV~Ey~~ggsL~~----~-------L---~----~~~-------~Lse~~~~----------~I~~qIa~aL~yLH 525 (683)
+..++|++|++|..+.. . + . ... ...+.... .....+..++.++.
T Consensus 87 ~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 166 (296)
T cd05153 87 GKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQD 166 (296)
T ss_pred CceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHH
Confidence 45678999999876532 0 1 0 000 00111100 01111233444444
Q ss_pred h-----cCCceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 526 K-----RAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 526 ~-----~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
. ....+||+|+.|.|||+++++.+.|+||+.+..
T Consensus 167 ~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 167 AFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 2 123599999999999999877789999998753
No 478
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.11 E-value=0.0022 Score=72.26 Aligned_cols=162 Identities=21% Similarity=0.320 Sum_probs=101.2
Q ss_pred HHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceE
Q 005678 453 HAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKII 532 (683)
Q Consensus 453 ~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~II 532 (683)
.++....+++.+.|+|+..++++-........+|+|++ +.+|.+++..+. +-..... ++++.
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~-l~~~s~~----------------~~~~~ 89 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN-LKDESLL----------------AHGVL 89 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc-cchhhhc----------------ccccc
Confidence 45667889999999999999988765566788999999 789999987664 2211111 23344
Q ss_pred ecccCCcceEeCCCCcEEEEecCCccccccCcCCCcccccccCCCCCccCCcccccccCCCCCCchhHHHHHHHHHHHHH
Q 005678 533 HYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQML 612 (683)
Q Consensus 533 HrDLKP~NILLd~~g~vKL~DFGls~~~~~~~~~~~~~l~~~~~GT~~Y~APE~~~~~~~~~~s~ksDVWSLGvILyELL 612 (683)
|- +.++++| .+. |. | |- ...+|+||||+|.++.++.
T Consensus 90 ~~------------~~~~~td-----~~~----------------t~-~--~~--------~~~pKsdVwsl~~i~~el~ 125 (725)
T KOG1093|consen 90 HL------------NIIYITD-----HFL----------------TK-Y--PS--------PIGPKSDVWSLGFIILELY 125 (725)
T ss_pred ee------------hhhhccc-----ccc----------------cc-C--CC--------CCCcchhhhhHHHHHHHHH
Confidence 42 2334444 000 00 1 10 0124899999999999999
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHhhccCCC---------CCcCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 005678 613 FGRRPFGHDQTQERILREDTIIKARKVEFP---------SRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 679 (683)
Q Consensus 613 tG~~PF~~~~~~e~il~~~~i~~~~~~~~p---------~~~~~s~el~dLI~rCL~~dP~kRPS~~eLl~hP~l~ 679 (683)
.|...|......+.... +.+....... ....++.-+..+...|+...|..||...++.+++-|.
T Consensus 126 L~~~l~~~~~~s~~l~~---i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ 198 (725)
T KOG1093|consen 126 LGISLEAELTESEYLEI---LLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFT 198 (725)
T ss_pred HhhHHHHHHHHHHHHHH---HHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHH
Confidence 98877644333222211 0010000000 0023455677889999999999999999999888664
No 479
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.00 E-value=0.005 Score=65.30 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=26.8
Q ss_pred CceEecccCCcceEeCCC----CcEEEEecCCcc
Q 005678 529 QKIIHYDLKPGNVLFDEF----GVAKVTDFGLSK 558 (683)
Q Consensus 529 ~~IIHrDLKP~NILLd~~----g~vKL~DFGls~ 558 (683)
..++|+|+.|.|||++.+ +.+.|+||..|.
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 469999999999999974 889999999875
No 480
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.00 E-value=0.0052 Score=65.58 Aligned_cols=141 Identities=19% Similarity=0.146 Sum_probs=76.8
Q ss_pred EEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCc--eeeecccc-----ccC
Q 005678 407 LLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHH--IVRLWDTF-----EID 479 (683)
Q Consensus 407 l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~Hpn--IV~L~~~f-----~~d 479 (683)
.+..++.|....||+... .++ .+++|++..... . ..+..|+.++..|...+ +.+++... ...
T Consensus 26 ~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~~--~-------~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~ 94 (307)
T TIGR00938 26 SLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRVK--A-------EELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTL 94 (307)
T ss_pred eccccCCccccceEEEEe-CCC-cEEEEEecCCCC--H-------HHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhc
Confidence 456677777789998853 344 566787644211 1 12334555555553222 23333221 112
Q ss_pred CceEEEEEecccCCChh-----------HHH---hc-CCCc-----------chHHHH------------HHHHHHHHHH
Q 005678 480 QNTFCTVLEYCSGKDLD-----------AVL---KA-TPVL-----------PEREAR------------IIIVQIFQGL 521 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~-----------~~L---~~-~~~L-----------se~~~~------------~I~~qIa~aL 521 (683)
.+..++|++|++|..+. ..+ .. ...+ .|.... .....+...+
T Consensus 95 ~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~ 174 (307)
T TIGR00938 95 AGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKEL 174 (307)
T ss_pred CCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHH
Confidence 45678999999885432 111 00 0001 011100 0011233345
Q ss_pred HHHHh-----cCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 522 IYLNK-----RAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 522 ~yLH~-----~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
.++.. ....+||+|+.+.||+++.++.+.|+||+.+.
T Consensus 175 ~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 175 DYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 55542 12459999999999999988877899999875
No 481
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=96.88 E-value=0.12 Score=61.63 Aligned_cols=61 Identities=16% Similarity=0.308 Sum_probs=30.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 005678 193 SLEEEVTSLHRKVAALEEDLRKSRQNAVDYQNLCHQLEKELKDVKEYEQQMKPRRTKIISD 253 (683)
Q Consensus 193 ~~~~~~~~~~~k~~~le~~l~~~~~e~~~~~~~~~~~e~~l~e~~~~~~~~~~k~~~~~~~ 253 (683)
.|+.|+..||..|...-+.-+++|+.+.-+.+.-+++..+|+.+++..+++..|+++..+.
T Consensus 422 rLE~dvkkLraeLq~~Rq~E~ELRsqis~l~~~Er~lk~eL~qlr~ene~Lq~Kl~~L~~a 482 (697)
T PF09726_consen 422 RLEADVKKLRAELQSSRQSEQELRSQISSLTNNERSLKSELSQLRQENEQLQNKLQNLVQA 482 (697)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444443333333344333333333555566666666666666666655543
No 482
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.78 E-value=0.0059 Score=66.99 Aligned_cols=82 Identities=24% Similarity=0.256 Sum_probs=49.9
Q ss_pred EecccCceEEEEEEEccCCeEEEEEEeccC-----cccchhhHHHHHHHHHHHHHHHhhcC--CCc-eeeeccccccCCc
Q 005678 410 LLGKGGFSEVYKAYDLVEHRYVACKLHGLN-----AQWSEDKKQSYIRHAIREYNIHKTLV--HHH-IVRLWDTFEIDQN 481 (683)
Q Consensus 410 ~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~-----~~~~~~~~~~~i~~~~rEi~il~~L~--Hpn-IV~L~~~f~~d~~ 481 (683)
.||-|...-||++.+...++.|+||.-... ..|+.. +.+..-|...|.... -|. ++++| .| +..
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~-----~~R~~~E~~~L~~~~~~~P~~vP~vy-~~--D~e 73 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLT-----LDRARIESSALIRQGEHVPHLVPRIF-HF--DTE 73 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCC-----ccHHHHHHHHHHHhhccCccccCeEE-EE--ccc
Confidence 478999999999987544478999963211 122222 234445777776653 343 44454 33 566
Q ss_pred eEEEEEecccC-CChhHHH
Q 005678 482 TFCTVLEYCSG-KDLDAVL 499 (683)
Q Consensus 482 ~~~LV~Ey~~g-gsL~~~L 499 (683)
..++|||+++. ..|...|
T Consensus 74 ~~~~vMEdL~~~~ilR~~L 92 (370)
T TIGR01767 74 MAVTVMEDLSHHKIARKGL 92 (370)
T ss_pred cceehHhhCccchHHHHHH
Confidence 77799999965 3344444
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.63 E-value=0.012 Score=62.45 Aligned_cols=30 Identities=33% Similarity=0.598 Sum_probs=25.2
Q ss_pred ceEecccCCcceEeCCCCc-EEEEecCCccc
Q 005678 530 KIIHYDLKPGNVLFDEFGV-AKVTDFGLSKI 559 (683)
Q Consensus 530 ~IIHrDLKP~NILLd~~g~-vKL~DFGls~~ 559 (683)
.+||+|+.|.|||++.++. .-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4999999999999997454 56999998753
No 484
>PRK05231 homoserine kinase; Provisional
Probab=96.63 E-value=0.024 Score=60.63 Aligned_cols=31 Identities=32% Similarity=0.399 Sum_probs=26.4
Q ss_pred CceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 529 QKIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 529 ~~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
.++||+|+.|.|||++.+...-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 3699999999999999766668999998753
No 485
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.40 E-value=0.012 Score=65.31 Aligned_cols=84 Identities=18% Similarity=0.267 Sum_probs=53.9
Q ss_pred EEEecccCceEEEEEEEccCCeEEEEEEe----ccCcccchhhHHHHHHHHHHHHHHHhhcC--CCc-eeeeccccccCC
Q 005678 408 LNLLGKGGFSEVYKAYDLVEHRYVACKLH----GLNAQWSEDKKQSYIRHAIREYNIHKTLV--HHH-IVRLWDTFEIDQ 480 (683)
Q Consensus 408 ~~~LGkGgfG~Vyka~d~~~g~~VAVKi~----~~~~~~~~~~~~~~i~~~~rEi~il~~L~--Hpn-IV~L~~~f~~d~ 480 (683)
+..||-|.-.-||++.+...++.|+||.- .....|+.. ..+..-|..+|+.+. -|. ++++| +| +.
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~-----~~R~~~E~~aL~~~~~~~P~~VP~vy-~~--D~ 105 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLS-----TNRIRIESDVLQLEEELAPGLVPKVY-LF--DS 105 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCC-----hHHHHHHHHHHHHHHhhCCCcCCeEE-EE--Cc
Confidence 67889999999999987444678999952 333334333 334555777777663 354 44455 33 56
Q ss_pred ceEEEEEecccCC-ChhHHH
Q 005678 481 NTFCTVLEYCSGK-DLDAVL 499 (683)
Q Consensus 481 ~~~~LV~Ey~~gg-sL~~~L 499 (683)
...++|||+++.. .|...|
T Consensus 106 e~~~~vMEdL~~~~ilR~~L 125 (409)
T PRK12396 106 VMNCCVMEDLSDHTILRTAL 125 (409)
T ss_pred HHhhHHHHhCcccHHHHHHH
Confidence 6777999999653 344444
No 486
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.28 E-value=0.045 Score=59.29 Aligned_cols=31 Identities=29% Similarity=0.508 Sum_probs=28.1
Q ss_pred ceEecccCCcceEeCCCCcEEEEecCCcccc
Q 005678 530 KIIHYDLKPGNVLFDEFGVAKVTDFGLSKIV 560 (683)
Q Consensus 530 ~IIHrDLKP~NILLd~~g~vKL~DFGls~~~ 560 (683)
.++|+|+.+.||+++..+-+=|.||+++..-
T Consensus 199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred eeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 5999999999999998888999999998754
No 487
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.27 E-value=0.061 Score=60.13 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=50.5
Q ss_pred EEEEecccCceEEEEEEEccCCeEEEEEEecc-----CcccchhhHHHHHHHHHHHHHHHhhcC---CCceeeecccccc
Q 005678 407 LLNLLGKGGFSEVYKAYDLVEHRYVACKLHGL-----NAQWSEDKKQSYIRHAIREYNIHKTLV---HHHIVRLWDTFEI 478 (683)
Q Consensus 407 l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~-----~~~~~~~~~~~~i~~~~rEi~il~~L~---HpnIV~L~~~f~~ 478 (683)
..+.||-|....||+..+ .+..|+||.-.. ...|+.. +.....|...|..+. ..++.++|.++.
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~-----~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de- 107 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMT-----KERAYFEATALREHGRLCPDHVPEVYHFDR- 107 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCC-----ccHHHHHHHHHHHhhhcCCCCCCeEEEECC-
Confidence 467889999999999875 345688997542 2222222 223344555665553 236666775543
Q ss_pred CCceEEEEEecccC--CChhHHH
Q 005678 479 DQNTFCTVLEYCSG--KDLDAVL 499 (683)
Q Consensus 479 d~~~~~LV~Ey~~g--gsL~~~L 499 (683)
+..+++|||+++ ..+...+
T Consensus 108 --d~~vlvME~L~~~~~ilr~~L 128 (418)
T PLN02756 108 --TMALIGMRYLEPPHIILRKGL 128 (418)
T ss_pred --CCCEEEEeecCCcceehhhhh
Confidence 445689999977 3454444
No 488
>PLN02236 choline kinase
Probab=96.20 E-value=0.055 Score=59.13 Aligned_cols=142 Identities=20% Similarity=0.198 Sum_probs=79.5
Q ss_pred eeEEEEecccCceEEEEEEEcc----CCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCcee-eeccccccC
Q 005678 405 YALLNLLGKGGFSEVYKAYDLV----EHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHIV-RLWDTFEID 479 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~----~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnIV-~L~~~f~~d 479 (683)
..-+..|-.|-.-.+|++.... .+..|++|+........ + .-..|..++..+..-++- ++++.|.
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~-------i-dR~~E~~~~~~l~~~gl~P~~~~~~~-- 107 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELF-------F-DRDDEIRTFECMSRHGQGPRLLGRFP-- 107 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCee-------e-chHHHHHHHHHHHHcCCCCceEEEEC--
Confidence 3344556557777899985322 24689999876543211 1 124577777777543333 3445553
Q ss_pred CceEEEEEecccCCChhHH--------------H---hcCC------CcchHHHHHHHHHH-----------------HH
Q 005678 480 QNTFCTVLEYCSGKDLDAV--------------L---KATP------VLPEREARIIIVQI-----------------FQ 519 (683)
Q Consensus 480 ~~~~~LV~Ey~~ggsL~~~--------------L---~~~~------~Lse~~~~~I~~qI-----------------a~ 519 (683)
++ .|++|+++.+|... + .... ...+..+..++.++ ..
T Consensus 108 ~g---~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~ 184 (344)
T PLN02236 108 NG---RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLED 184 (344)
T ss_pred Cc---eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHH
Confidence 22 57999988776421 0 0000 11122222222111 11
Q ss_pred HHHHH----Hh--cCCceEecccCCcceEeCC-CCcEEEEecCCccc
Q 005678 520 GLIYL----NK--RAQKIIHYDLKPGNVLFDE-FGVAKVTDFGLSKI 559 (683)
Q Consensus 520 aL~yL----H~--~g~~IIHrDLKP~NILLd~-~g~vKL~DFGls~~ 559 (683)
.+..| .. ....++|+|+++.|||+++ ++.+.|+||..+..
T Consensus 185 ~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 185 EINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 12222 11 1235999999999999986 57899999998864
No 489
>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton]
Probab=95.94 E-value=1.1 Score=44.73 Aligned_cols=130 Identities=22% Similarity=0.268 Sum_probs=92.3
Q ss_pred hhccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhH--------------HHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 005678 187 LIDNCSSLEEEVTSLHRKVAALEEDLRKSRQNAVDYQ--------------NLCHQLEKELKDVKEYEQQMKPRRTKIIS 252 (683)
Q Consensus 187 ~~~~~~~~~~~~~~~~~k~~~le~~l~~~~~e~~~~~--------------~~~~~~e~~l~e~~~~~~~~~~k~~~~~~ 252 (683)
.|..++.|++++..-+++++.+=+.|...++..++.+ ..+..++.+|+|.+.-.+.-..||..|.+
T Consensus 9 lnrri~~leeele~aqErl~~a~~KL~Eaeq~~dE~er~~Kv~enr~~kdEE~~e~~e~qLkEAk~iaE~adrK~eEVar 88 (205)
T KOG1003|consen 9 LNRRIQLLEEELDRAQERLATALQKLEEAEQAADESERGMKVIENRAQKLEEKMEAQEAQLKEAKHIAEKADRKYEEVAR 88 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666778888888777777777777777766655433 34466778889988888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhcceeeEEeecccchhhcccchhHHHHHHHHHHHHHhHHHHHHHHHhhhcc
Q 005678 253 DLLISVSKAERQEARLKIRQESVRLGNVGVIRAGTVISETWEDGQALKDLNAHLRQLLETKEAVERQRKSLKKR 326 (683)
Q Consensus 253 ~~~~~~~~~~r~~~r~~~~~~~~rlg~~~~~r~~~~~~e~w~dg~~~~~l~~~~~~~~e~~~~~e~~~k~~~~~ 326 (683)
+|.|-....|+.+-|..+-+.... ..--+.-.-|...+.|...-.+..+..+..+.+-+.+..+
T Consensus 89 kL~iiE~dLE~~eeraE~~Es~~~----------eLeEe~~~~~~nlk~l~~~ee~~~q~~d~~e~~ik~ltdK 152 (205)
T KOG1003|consen 89 KLVIIEGELERAEERAEAAESQSE----------ELEEDLRILDSNLKSLSAKEEKLEQKEEKYEEELKELTDK 152 (205)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHH----------HHHHHHHHhHhHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 999999999999999777665433 0011222336666777777777777777776666655444
No 490
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.90 E-value=0.09 Score=57.09 Aligned_cols=30 Identities=30% Similarity=0.454 Sum_probs=26.3
Q ss_pred ceEecccCCcceEeCC-CCcEEEEecCCccc
Q 005678 530 KIIHYDLKPGNVLFDE-FGVAKVTDFGLSKI 559 (683)
Q Consensus 530 ~IIHrDLKP~NILLd~-~g~vKL~DFGls~~ 559 (683)
.++|.|+.|.|||+++ ++.++++||..|..
T Consensus 183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 4899999999999974 57899999998864
No 491
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.89 E-value=0.062 Score=57.51 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=27.3
Q ss_pred ceEecccCCcceEeCCCCcEEEEecCCccc
Q 005678 530 KIIHYDLKPGNVLFDEFGVAKVTDFGLSKI 559 (683)
Q Consensus 530 ~IIHrDLKP~NILLd~~g~vKL~DFGls~~ 559 (683)
++||+|+.++|||++.++.+.|+||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 699999999999999989999999987753
No 492
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.86 E-value=0.062 Score=56.92 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=25.5
Q ss_pred CceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 529 QKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 529 ~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
..+||+|+.+.|||++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 35999999999999997 678999999764
No 493
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.50 E-value=0.023 Score=57.14 Aligned_cols=30 Identities=37% Similarity=0.630 Sum_probs=21.4
Q ss_pred ceEecccCCcceEe-CCCCcEEEEecCCccc
Q 005678 530 KIIHYDLKPGNVLF-DEFGVAKVTDFGLSKI 559 (683)
Q Consensus 530 ~IIHrDLKP~NILL-d~~g~vKL~DFGls~~ 559 (683)
.++|.||.|.|||+ +.++.++|+||..|..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 59999999999999 7889999999998753
No 494
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.04 E-value=0.091 Score=54.12 Aligned_cols=86 Identities=23% Similarity=0.407 Sum_probs=59.5
Q ss_pred HHHHHHHHHhhcCCCceeeeccccccCCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceE
Q 005678 453 HAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKII 532 (683)
Q Consensus 453 ~~~rEi~il~~L~HpnIV~L~~~f~~d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~II 532 (683)
.+..++.++.++ -.|++|..- ++..+.+++|+|-. +.....- ++.-=+.+|.-.|+...+.+
T Consensus 104 ~y~nky~v~Arm--hGilrL~ND---n~~~yGvIlE~Cy~------------~~i~~~N-~i~agi~~L~~fH~~~~~~l 165 (308)
T PF07387_consen 104 LYFNKYRVFARM--HGILRLKND---NNYKYGVILERCYK------------IKINFSN-FITAGIKDLMDFHSENQHCL 165 (308)
T ss_pred hhhhhhhHHHHh--hheeEeecC---CCceeEEEEeeccC------------cccchhH-HHHHhHHHHHHhhccCCCee
Confidence 345677787776 367777632 45567789999832 1111111 12122567888897666899
Q ss_pred ecccCCcceEeCCCCcEEEEecCC
Q 005678 533 HYDLKPGNVLFDEFGVAKVTDFGL 556 (683)
Q Consensus 533 HrDLKP~NILLd~~g~vKL~DFGl 556 (683)
|+|..|+|||-|..|.+||.|=+.
T Consensus 166 HGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 166 HGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred cCCCChhheeecCCCCEEecChhh
Confidence 999999999999999999999653
No 495
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=94.69 E-value=0.066 Score=58.68 Aligned_cols=74 Identities=20% Similarity=0.232 Sum_probs=57.8
Q ss_pred CCceEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeCCCCcEEEEecCCcc
Q 005678 479 DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK 558 (683)
Q Consensus 479 d~~~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd~~g~vKL~DFGls~ 558 (683)
+.-+.|++|++. |++|..+ ....+.++..|+.+.+..+.-+-.. -++-|||+.-+||||+ .|++.|+||-+|+
T Consensus 297 e~~y~yl~~kdh-gt~is~i----k~~~~~e~lsff~s~~sil~~lekk-f~fehrnlt~~niLId-~GnvtLIDfklsR 369 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISII----KADRSEEELSFFWSCISILDILEKK-FPFEHRNLTLDNILID-EGNVTLIDFKLSR 369 (488)
T ss_pred CceEEEEEEecC-Cceeeee----ecccHHHHHHHHHHHHHHHhhhhhc-CCcccccccccceeee-cCceEEEEeeeee
Confidence 455677888887 5555433 2245778888998888877777653 4799999999999999 7999999999998
Q ss_pred c
Q 005678 559 I 559 (683)
Q Consensus 559 ~ 559 (683)
.
T Consensus 370 l 370 (488)
T COG5072 370 L 370 (488)
T ss_pred c
Confidence 4
No 496
>PRK11637 AmiB activator; Provisional
Probab=94.38 E-value=2.9 Score=47.13 Aligned_cols=26 Identities=15% Similarity=0.344 Sum_probs=13.2
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHh
Q 005678 297 QALKDLNAHLRQLLETKEAVERQRKS 322 (683)
Q Consensus 297 ~~~~~l~~~~~~~~e~~~~~e~~~k~ 322 (683)
..+.++....+++.+.+.+++.+...
T Consensus 170 ~~l~~l~~~~~~L~~~k~~le~~~~~ 195 (428)
T PRK11637 170 ETIAELKQTREELAAQKAELEEKQSQ 195 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555544433
No 497
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=94.37 E-value=0.1 Score=58.04 Aligned_cols=61 Identities=25% Similarity=0.319 Sum_probs=45.7
Q ss_pred eEEEEEecccCCChhHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCceEecccCCcceEeC
Q 005678 482 TFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD 544 (683)
Q Consensus 482 ~~~LV~Ey~~ggsL~~~L~~~~~Lse~~~~~I~~qIa~aL~yLH~~g~~IIHrDLKP~NILLd 544 (683)
...+|-+|..|.++..+++..+ .++.....++.-.+.|+.-+--- .+++|.|+.|.||++.
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~~~-~pe~l~kkva~lg~~AllkMl~v-DNFvHaDlHPGNVlir 379 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKWKS-QPEALVKKVAKLGVNALLKMLIV-DNFVHADLHPGNVLIR 379 (565)
T ss_pred cceeeeeccccccHHhhhhccc-ChHHHHHHHHHHHHHHHHHHHHh-hcceecccCCCcEEEE
Confidence 3457778898999998887554 56666667777777777655432 3799999999999995
No 498
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=93.91 E-value=0.24 Score=52.96 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=41.3
Q ss_pred eEEEEecccCceEEEEEEEccCCeEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcC---CCceeeeccccccCCce
Q 005678 406 ALLNLLGKGGFSEVYKAYDLVEHRYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLV---HHHIVRLWDTFEIDQNT 482 (683)
Q Consensus 406 ~l~~~LGkGgfG~Vyka~d~~~g~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~---HpnIV~L~~~f~~d~~~ 482 (683)
.-.+.||-|....+|+.. .++..+.||+-.... ...+..|..-|+.|. --.+++.+.+...+ +.
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~----------~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~-~~ 86 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESG----------RDMFEGEAEGLKALAEANPIRVPKVIAWGEYD-DD 86 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGG----------CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-S-SC
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecChhh----------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeec-CC
Confidence 345778989999999984 778889999864111 123455666666662 33455666655433 34
Q ss_pred EEEEEecccCC
Q 005678 483 FCTVLEYCSGK 493 (683)
Q Consensus 483 ~~LV~Ey~~gg 493 (683)
.+|||||++.+
T Consensus 87 ~fLlle~l~~~ 97 (288)
T PF03881_consen 87 AFLLLEFLEMG 97 (288)
T ss_dssp CEEEEE-----
T ss_pred ceEEEEeecCC
Confidence 47999999876
No 499
>PRK11637 AmiB activator; Provisional
Probab=93.89 E-value=3.2 Score=46.79 Aligned_cols=14 Identities=29% Similarity=0.449 Sum_probs=5.5
Q ss_pred HHHhHHHHHHHHHh
Q 005678 309 LLETKEAVERQRKS 322 (683)
Q Consensus 309 ~~e~~~~~e~~~k~ 322 (683)
+...+.+++.+++.
T Consensus 175 l~~~~~~L~~~k~~ 188 (428)
T PRK11637 175 LKQTREELAAQKAE 188 (428)
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444443333
No 500
>PTZ00384 choline kinase; Provisional
Probab=93.83 E-value=0.74 Score=51.23 Aligned_cols=79 Identities=19% Similarity=0.283 Sum_probs=46.1
Q ss_pred eeEEEEecccCceEEEEEEEccCC------eEEEEEEeccCcccchhhHHHHHHHHHHHHHHHhhcCCCce-eeeccccc
Q 005678 405 YALLNLLGKGGFSEVYKAYDLVEH------RYVACKLHGLNAQWSEDKKQSYIRHAIREYNIHKTLVHHHI-VRLWDTFE 477 (683)
Q Consensus 405 y~l~~~LGkGgfG~Vyka~d~~~g------~~VAVKi~~~~~~~~~~~~~~~i~~~~rEi~il~~L~HpnI-V~L~~~f~ 477 (683)
...+..|..|-...+|++...... +.|.+++....... .-.-.+|+.+++.+...++ .++++.|.
T Consensus 52 ~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l--------~IdR~~E~~i~~~Ls~~glgP~l~~~f~ 123 (383)
T PTZ00384 52 FIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSL--------VIDNDLQYNIAKLLGDNNFGPKIIGRFG 123 (383)
T ss_pred cEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCce--------EeccHHHHHHHHHHHhCCCCCeEEEecC
Confidence 334556656888899998533221 23555554222111 1123458888888865444 45565553
Q ss_pred cCCceEEEEEecccCCChh
Q 005678 478 IDQNTFCTVLEYCSGKDLD 496 (683)
Q Consensus 478 ~d~~~~~LV~Ey~~ggsL~ 496 (683)
+ ++|+||++|.+|.
T Consensus 124 --~---g~l~efIeGr~l~ 137 (383)
T PTZ00384 124 --D---FTIQEWVEGNTMG 137 (383)
T ss_pred --C---EEEEEEeccccCC
Confidence 1 4899999997764
Done!