Query 005679
Match_columns 683
No_of_seqs 427 out of 2744
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 04:23:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005679.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005679hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qaj_A Glutamine synthetase; A 100.0 2.9E-62 1E-66 537.2 21.1 270 399-683 9-297 (444)
2 4hpp_A Probable glutamine synt 100.0 2.2E-61 7.6E-66 529.5 26.4 265 405-683 4-289 (443)
3 3ng0_A Glutamine synthetase; G 100.0 7.1E-60 2.4E-64 523.3 26.9 270 399-683 8-323 (473)
4 2qpx_A Predicted metal-depende 100.0 1.6E-59 5.5E-64 510.6 18.0 363 3-383 2-373 (376)
5 4acf_A Glutamine synthetase 1; 100.0 2.2E-57 7.4E-62 506.5 28.1 273 398-683 16-336 (486)
6 1f52_A Glutamine synthetase; A 100.0 3.4E-57 1.2E-61 502.2 28.6 269 400-683 6-320 (468)
7 1j5s_A Uronate isomerase; TM00 100.0 1.7E-56 5.8E-61 487.3 22.0 360 4-379 27-462 (463)
8 3iac_A Glucuronate isomerase; 100.0 9.6E-55 3.3E-59 468.1 23.1 362 4-381 20-473 (473)
9 2q01_A Uronate isomerase; stru 100.0 4.3E-54 1.5E-58 472.2 25.8 366 4-386 26-478 (497)
10 2j9i_A Glutamate-ammonia ligas 100.0 1.3E-54 4.6E-59 474.5 8.6 257 400-683 6-282 (421)
11 2ojw_A Glutamine synthetase; a 100.0 1.7E-49 5.9E-54 428.8 22.2 268 398-683 33-317 (384)
12 3fky_A Glutamine synthetase; b 100.0 2.4E-49 8.1E-54 425.7 22.9 261 403-683 18-291 (370)
13 2d3a_A Glutamine synthetase; l 100.0 2.2E-47 7.5E-52 408.9 20.9 260 404-683 14-290 (356)
14 2qee_A BH0493 protein; amidohy 100.0 5.2E-38 1.8E-42 336.6 18.4 337 4-385 13-421 (437)
15 3o6x_A Glutamine synthetase; t 100.0 4.6E-39 1.6E-43 361.0 9.4 210 466-683 143-398 (729)
16 3irs_A Uncharacterized protein 99.7 2.8E-17 9.5E-22 172.2 9.9 149 211-383 135-283 (291)
17 3ij6_A Uncharacterized metal-d 99.6 1.9E-15 6.6E-20 159.7 12.1 172 186-381 108-306 (312)
18 4do7_A Amidohydrolase 2; enzym 99.6 2.8E-15 9.7E-20 157.7 13.0 151 210-384 118-292 (303)
19 4inf_A Metal-dependent hydrola 99.5 9.8E-15 3.4E-19 157.8 10.1 167 187-380 158-373 (373)
20 3cjp_A Predicted amidohydrolas 99.5 1.7E-14 5.8E-19 149.0 11.1 138 212-382 128-266 (272)
21 4d9a_A 2-pyrone-4,6-dicarbaxyl 99.5 1.7E-14 5.9E-19 151.8 9.4 149 209-383 133-295 (303)
22 2ffi_A 2-pyrone-4,6-dicarboxyl 99.5 3.8E-14 1.3E-18 147.4 10.5 149 210-383 120-282 (288)
23 3nur_A Amidohydrolase; TIM bar 99.5 1.4E-14 4.9E-19 155.8 7.4 170 186-382 139-355 (357)
24 4i6k_A Amidohydrolase family p 99.5 4.8E-14 1.6E-18 147.7 9.2 145 212-382 135-293 (294)
25 2dvt_A Thermophilic reversible 99.4 5.4E-14 1.8E-18 148.8 7.1 146 209-381 140-325 (327)
26 2f6k_A Metal-dependent hydrola 99.4 9.5E-14 3.2E-18 145.6 8.7 148 210-380 131-307 (307)
27 2wm1_A 2-amino-3-carboxymucona 99.4 6E-13 2.1E-17 141.7 9.6 170 187-383 122-333 (336)
28 2hbv_A 2-amino-3-carboxymucona 99.4 1.2E-12 4.2E-17 139.3 10.4 147 208-381 152-333 (334)
29 2gwg_A 4-oxalomesaconate hydra 99.3 1.3E-12 4.4E-17 140.1 6.7 148 209-380 154-332 (350)
30 4dzi_A Putative TIM-barrel met 99.3 2.2E-12 7.6E-17 141.5 7.3 169 186-383 173-398 (423)
31 2gzx_A Putative TATD related D 99.3 9.4E-12 3.2E-16 127.4 11.3 147 209-381 104-256 (265)
32 1j6o_A TATD-related deoxyribon 99.3 3.5E-11 1.2E-15 124.1 14.0 146 209-381 115-266 (268)
33 1yix_A Deoxyribonuclease YCFH; 99.1 4.7E-10 1.6E-14 114.8 14.2 149 209-382 106-258 (265)
34 1zzm_A Putative deoxyribonucle 98.9 3.3E-09 1.1E-13 108.3 10.1 145 210-381 110-259 (259)
35 1xwy_A DNAse TATD, deoxyribonu 98.9 1.6E-08 5.5E-13 103.5 13.2 145 210-381 108-263 (264)
36 2y1h_A Putative deoxyribonucle 98.8 7.4E-08 2.5E-12 99.0 14.8 143 210-381 122-266 (272)
37 1bf6_A Phosphotriesterase homo 98.5 8.7E-07 3E-11 91.4 13.3 146 215-379 139-291 (291)
38 2xio_A Putative deoxyribonucle 98.5 1.2E-06 4E-11 91.7 13.6 145 210-382 123-294 (301)
39 3rcm_A TATD family hydrolase; 98.4 8.8E-07 3E-11 92.0 10.5 153 211-389 111-273 (287)
40 2vc7_A Aryldialkylphosphatase; 98.3 4.4E-06 1.5E-10 87.4 13.0 146 215-379 152-314 (314)
41 3ovg_A Amidohydrolase; structu 98.3 5.7E-06 2E-10 88.5 13.3 152 217-383 172-333 (363)
42 3gg7_A Uncharacterized metallo 98.2 4.1E-06 1.4E-10 85.3 9.3 145 210-382 100-246 (254)
43 3pnz_A Phosphotriesterase fami 98.1 1.1E-05 3.7E-10 85.4 11.6 148 219-381 173-329 (330)
44 3k2g_A Resiniferatoxin-binding 98.1 2E-05 7E-10 84.4 13.7 148 217-383 193-357 (364)
45 3gtx_A Organophosphorus hydrol 98.0 2.4E-05 8.1E-10 83.1 12.4 147 219-379 178-339 (339)
46 2ob3_A Parathion hydrolase; me 98.0 3.7E-05 1.3E-09 81.4 12.8 145 219-379 153-325 (330)
47 3guw_A Uncharacterized protein 98.0 3.4E-06 1.2E-10 86.4 3.7 138 215-383 111-251 (261)
48 3rhg_A Putative phophotriester 98.0 4.7E-05 1.6E-09 81.6 12.7 151 219-384 184-348 (365)
49 3tn4_A Phosphotriesterase; lac 97.8 0.00016 5.3E-09 77.3 14.0 150 217-379 196-359 (360)
50 3ipw_A Hydrolase TATD family p 97.5 0.0011 3.6E-08 69.8 14.5 95 215-329 155-251 (325)
51 2z26_A Dihydroorotase, dhoase; 96.6 0.0019 6.6E-08 68.5 5.7 150 215-381 121-306 (347)
52 3e2v_A 3'-5'-exonuclease; stru 96.6 0.034 1.2E-06 59.7 15.4 57 266-328 250-306 (401)
53 2i5g_A Amidohydrolase; NYSGXRC 95.8 0.037 1.3E-06 58.0 10.7 69 301-379 225-320 (325)
54 2gwd_A Glutamate cysteine liga 93.4 0.11 3.9E-06 56.8 7.2 85 524-628 34-134 (449)
55 3ly0_A Dipeptidase AC. metallo 93.3 0.16 5.3E-06 53.9 7.7 70 301-380 282-353 (364)
56 3id7_A Dipeptidase; streptomyc 91.8 0.49 1.7E-05 50.7 9.4 71 300-380 295-368 (400)
57 2vun_A Enamidase; nicotinate d 91.7 2.6 9E-05 44.1 15.1 143 213-380 173-320 (386)
58 3b40_A PVDM, probable dipeptid 90.9 0.95 3.2E-05 48.9 10.5 70 301-380 335-406 (417)
59 3neh_A Renal dipeptidase famil 90.8 1.4 4.9E-05 45.6 11.5 70 301-381 239-311 (318)
60 2rag_A Dipeptidase; aminohydro 90.7 0.48 1.6E-05 51.2 7.9 69 301-379 336-406 (417)
61 3pnu_A Dihydroorotase; TIM bar 90.5 1.6 5.4E-05 46.2 11.7 76 212-295 134-212 (359)
62 1itu_A Renal dipeptidase; glyc 90.4 0.99 3.4E-05 47.9 9.9 71 301-380 264-336 (369)
63 1r8g_A Hypothetical protein YB 90.0 0.95 3.2E-05 48.1 9.6 83 524-628 11-94 (372)
64 2z00_A Dihydroorotase; zinc bi 87.7 1.4 4.7E-05 46.9 9.0 31 347-381 336-366 (426)
65 3gnh_A L-lysine, L-arginine ca 86.8 14 0.00049 38.4 16.3 138 213-385 206-363 (403)
66 3hm7_A Allantoinase; metallo-d 86.4 2 6.9E-05 46.3 9.5 164 215-384 170-381 (448)
67 2ics_A Adenine deaminase; TIM 81.9 11 0.00037 39.0 12.5 130 218-382 172-319 (379)
68 4f0r_A 5-methylthioadenosine/S 78.0 5.7 0.0002 42.4 8.9 158 213-385 199-362 (447)
69 3gri_A Dihydroorotase, dhoase; 77.4 7.1 0.00024 41.7 9.4 162 213-380 157-362 (424)
70 3mpg_A Dihydroorotase, dhoase; 76.5 6.6 0.00023 41.9 8.9 162 214-381 159-364 (428)
71 3e74_A Allantoinase; (beta/alp 74.9 10 0.00034 41.4 9.9 161 215-381 188-395 (473)
72 3nqb_A Adenine deaminase 2; PS 73.1 27 0.00092 39.4 13.1 135 213-381 201-337 (608)
73 3gip_A N-acyl-D-glutamate deac 71.7 19 0.00064 39.1 11.1 58 318-382 358-416 (480)
74 3feq_A Putative amidohydrolase 71.6 31 0.001 36.1 12.6 137 213-385 211-367 (423)
75 4aql_A Guanine deaminase; hydr 71.0 90 0.0031 33.6 16.5 158 213-384 242-408 (476)
76 4dyk_A Amidohydrolase; adenosi 69.4 13 0.00044 39.6 9.1 156 215-385 203-364 (451)
77 2qs8_A XAA-Pro dipeptidase; am 67.4 48 0.0017 34.6 13.0 137 214-385 216-373 (418)
78 4dzh_A Amidohydrolase; adenosi 64.5 87 0.003 33.5 14.6 155 215-385 210-371 (472)
79 3sfw_A Dihydropyrimidinase; hy 63.9 46 0.0016 35.7 12.2 161 216-382 166-380 (461)
80 1nxi_A Conserved hypothetical 63.3 16 0.00054 32.6 6.8 89 511-626 22-113 (132)
81 3lnp_A Amidohydrolase family p 62.3 1.1E+02 0.0038 32.3 14.9 155 215-384 228-388 (468)
82 3be7_A Zn-dependent arginine c 62.1 78 0.0027 32.8 13.3 132 215-381 207-358 (408)
83 2r8c_A Putative amidohydrolase 59.1 1.2E+02 0.0041 31.7 14.3 137 213-385 214-370 (426)
84 3dc8_A Dihydropyrimidinase; TI 58.6 37 0.0013 37.0 10.3 112 261-382 228-377 (490)
85 2fty_A Dihydropyrimidinase; al 53.9 28 0.00097 38.7 8.4 35 344-382 400-435 (559)
86 3ooq_A Amidohydrolase; structu 53.2 48 0.0016 34.5 9.8 136 221-385 214-351 (396)
87 2ood_A BLR3880 protein; PSI-II 52.6 45 0.0015 35.9 9.6 112 213-327 213-328 (475)
88 1zpv_A ACT domain protein; str 52.2 9.7 0.00033 30.9 3.2 66 566-633 17-82 (91)
89 3h4u_A Amidohydrolase; signatu 46.8 34 0.0011 36.7 7.4 152 215-382 241-398 (479)
90 1xrt_A Dihydroorotase, dhoase; 43.8 82 0.0028 33.6 10.0 24 213-236 205-228 (467)
91 2paj_A Putative cytosine/guani 41.7 71 0.0024 34.2 9.1 106 213-326 228-337 (492)
92 1gkp_A Hydantoinase; hydrolase 41.4 1.7E+02 0.0058 30.7 12.0 34 345-382 345-378 (458)
93 3qy7_A Tyrosine-protein phosph 39.6 2.9E+02 0.0098 27.2 13.9 101 262-380 129-234 (262)
94 1v77_A PH1877P, hypothetical p 32.9 62 0.0021 31.0 6.0 108 251-379 89-208 (212)
95 3g8r_A Probable spore coat pol 32.3 40 0.0014 35.2 4.7 78 205-294 116-201 (350)
96 3ls9_A Triazine hydrolase; atr 30.5 1.6E+02 0.0055 30.7 9.5 152 214-382 219-379 (456)
97 2qt3_A N-isopropylammelide iso 29.0 4.3E+02 0.015 26.8 12.4 23 214-236 198-220 (403)
98 1u8s_A Glycine cleavage system 28.6 3E+02 0.01 25.3 10.0 67 565-633 104-178 (192)
99 3rys_A Adenosine deaminase 1; 28.3 1.2E+02 0.0041 31.4 7.7 158 147-331 113-286 (343)
100 4gxw_A Adenosine deaminase; am 28.0 1.4E+02 0.0048 31.3 8.2 84 147-236 129-219 (380)
101 1v5s_A MAP/microtubule affinit 27.8 2.2E+02 0.0076 24.9 8.1 69 558-626 33-120 (126)
102 1gkr_A Hydantoinase, non-ATP d 27.8 3.5E+02 0.012 28.1 11.6 34 345-382 343-376 (458)
103 3icj_A Uncharacterized metal-d 27.6 2.6E+02 0.009 30.6 10.8 148 212-385 327-484 (534)
104 2q09_A Imidazolonepropionase; 25.0 1.5E+02 0.0051 30.8 7.9 22 215-236 224-245 (416)
105 1p1m_A Hypothetical protein TM 22.2 66 0.0022 33.4 4.3 21 216-236 183-203 (406)
106 3ose_A Serine/threonine-protei 21.5 1.2E+02 0.0041 26.3 5.2 66 560-625 35-119 (120)
No 1
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=100.00 E-value=2.9e-62 Score=537.21 Aligned_cols=270 Identities=27% Similarity=0.437 Sum_probs=242.9
Q ss_pred hhhhhccCCceEEEEEEecCCCCceeEEEechhhhHHHhhcCccccccccccccccCCCCCCCCCCCCccEEEEeecCCc
Q 005679 399 KKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTR 478 (683)
Q Consensus 399 ~~~~~~~~~i~~V~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~l~PD~~Tl 478 (683)
+...+++.+|+||+++|+|++|++|+|.||+++|.++ .++|++|++++.. +... .+.+|++|+||++|+
T Consensus 9 ~~~~~~~~~i~~v~l~~~D~~G~~r~k~ip~~~~~~~-~~~G~~fdgssi~------g~~~----~~~~D~~l~PD~~T~ 77 (444)
T 3qaj_A 9 IEKLVKEENVKYIRLQFTDILGTIKNVEIPVSQLGKA-LDNKVMFDGSSIE------GFVR----IEESDMYLYPDLNTF 77 (444)
T ss_dssp HHHHHHHHTCCEEEEEEECSSSCEEEEEEEGGGHHHH-HTTCCEEETTTST------TSSC----TTCCEEECCBCGGGC
T ss_pred HHHHHHhCCCCEEEEEEECCCCCEEEEEEeHHHHHHH-HhCCccccCcccc------CccC----CCCCCEEEEEecCce
Confidence 4456778899999999999999999999999999886 4789999877531 1111 256899999999999
Q ss_pred eeccCCCC---cceEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCCe-eeeeeeeEEEEEeecccCCCCCcccCCCCC
Q 005679 479 WRIPWQKQ---EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLV-LNAGFEIEFYLLKSVLREGKEEWVPIDFTP 554 (683)
Q Consensus 479 ~~~pw~~~---~a~v~~d~~~~~g~p~~~cPR~~L~r~~~~~~~~~G~~-~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~ 554 (683)
+++||.++ +++|+||++++||+|++.|||++|||++++++ +.|++ +.+|+|+|||||+. +++|.....|.++++
T Consensus 78 ~~~Pw~~~~~~~a~v~cd~~~~dG~p~~~~pR~iLkr~~~~~~-~~G~~~~~~g~E~EF~l~~~-~~~g~~~~~~~~~~~ 155 (444)
T 3qaj_A 78 VIFPWTAEKGKVARFICDIYNPDGTPFEGDPRNNLKRILKEME-DLGFSDFNLGPEPEFFLFKL-DEKGEPTLELNDKGG 155 (444)
T ss_dssp EEEHHHHHHHCEEEEEBCCBCTTSCBCSSCHHHHHHHHHHHHH-TTTCCEEEEEEEECEEEEEE-CSSSCEEEEESCCCC
T ss_pred EECccccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCCeeeEEeceEEEEEec-CCCCCCCCcCcCCCC
Confidence 99999876 89999999999999999999999999999998 68999 99999999999997 333433445677889
Q ss_pred cccCCcccchHHHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHcCCeEEeeec-
Q 005679 555 YCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN- 633 (683)
Q Consensus 555 ~~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~k~~ik~vA~~~G~~ATFmpK- 633 (683)
||+..+.+...+++++|+++|+++||+||++|+|+|||||||++.|++++++||+++++|++||+||++||+.||||||
T Consensus 156 y~~~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP 235 (444)
T 3qaj_A 156 YFDLAPTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKTIARKHGLHATFMPKP 235 (444)
T ss_dssp TTCCTTTSCCTTHHHHHHHHHHTTTCCEEEEEECSSTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECCSCS
T ss_pred ccccCCCcchHHHHHHHHHHHHHCCCCeEEeEcCcCCCcEEEecCCChHHHHHHHHHHHHHHHHHHHHHcCCEEEEcCCc
Confidence 9998888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhcCCCCCCC
Q 005679 634 --------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL 683 (683)
Q Consensus 634 --------------l~~~g~N~f~~~~~~~~~~lS~~~~~fiaGiL~h~~al~a~~~Pt~NSY~ 683 (683)
||++|+|+|. ++++..+||+++++||||||+|+|+++||++||+|||+
T Consensus 236 ~~~~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGlL~h~~~l~a~~~PtvNSYk 297 (444)
T 3qaj_A 236 LFGVNGSGMHCNLSLFKNGVNAFF--DENADLQLSETAKHFIAGIVKHATSFTAVTNPTVNSYK 297 (444)
T ss_dssp STTSCCCCEEEEEEEEETTEETTC--CTTSSSSCCHHHHHHHHHHHHTHHHHHHHHSCSSTHHH
T ss_pred CCCCCCCcceeeeccccCCCcccC--CCCcccchHHHHHHHHHHHHHHHHHHHHHHCCCCcccc
Confidence 7788999998 44556789999999999999999999999999999995
No 2
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.2e-61 Score=529.50 Aligned_cols=265 Identities=28% Similarity=0.407 Sum_probs=240.8
Q ss_pred cCCceEEEEEEecCCCCceeEEEechhhhHHHhhcCccccccccccccccCCCCCCCCCCCCccEEEEeecCCceeccCC
Q 005679 405 ESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQ 484 (683)
Q Consensus 405 ~~~i~~V~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~l~PD~~Tl~~~pw~ 484 (683)
-++|+||+++|+|++|++|+|.||+++|.+. .++|++|+.+.+.++.. +.+..+++..+++|++|+||++|++++||.
T Consensus 4 ~~~v~~v~l~~~D~~G~~r~k~vp~~~~~~~-~~~G~~f~~s~~~~~~~-~~~~~~~~~~~~~D~~l~PD~~T~~~~Pw~ 81 (443)
T 4hpp_A 4 LQPVRLVSFVTTDLAGITRGRSLPLATLEEQ-LASGCGWVPANSSLTPQ-DLIDESSPWGSHGDLRLLPDPNSRVRVEQG 81 (443)
T ss_dssp CCCCCEEEEEEECTTSCEEEEEEEGGGHHHH-HTTCEEECGGGGGCCTT-SCCCTTCSCSSSCCEEEEECGGGCEEECCC
T ss_pred CCCCCEEEEEEECCCCCEEEEEEEHHHHHHH-HhCCcccCchhheeecc-CccccccCCCCCCCEEEEEcccceEECCcc
Confidence 4789999999999999999999999999886 47899999987777653 334433444678999999999999999999
Q ss_pred C-----CcceEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCCeeeeeeeeEEEEEeecccCCCCCcccCCCCCcccCC
Q 005679 485 K-----QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTA 559 (683)
Q Consensus 485 ~-----~~a~v~~d~~~~~g~p~~~cPR~~L~r~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~ 559 (683)
+ ++++|+||++++||+|++.|||++|||++++++ +.|+++.+|+|+|||||+. .|.+.++||+..
T Consensus 82 ~~~~~~~~a~v~cd~~~~dG~p~~~~pR~~L~r~~~~~~-~~G~~~~~g~E~EF~l~~~---------~p~~~~~~y~~~ 151 (443)
T 4hpp_A 82 PDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYR-DSGLQVIAAFEHEFSLLGL---------PGERPAAAFSLQ 151 (443)
T ss_dssp SSTTSCCEEEEEEEEECTTSCBCTTCHHHHHHHHHHHHH-HTTEEEEEEEEEEEEEECC---------CSSSCCCTTCHH
T ss_pred cccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCeEEEEeeeEEEEecc---------ccCCCCccCCCC
Confidence 8 789999999999999999999999999999998 6899999999999999963 355677899888
Q ss_pred cccchHHHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHcCCeEEeeec------
Q 005679 560 AYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN------ 633 (683)
Q Consensus 560 ~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~k~~ik~vA~~~G~~ATFmpK------ 633 (683)
+.+...+++++|++.|+++||+||++|+|+|||||||++.|.+++++||+++++|++||+||++||+.||||||
T Consensus 152 ~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~ 231 (443)
T 4hpp_A 152 AQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAV 231 (443)
T ss_dssp HHHHTTTHHHHHHHHHHHTTCCEEEEEECSSTTEEEEEECCEETHHHHHHHHHHHHHHHHHHHHHTCEEECSSSSSTTCC
T ss_pred cccchHHHHHHHHHHHHHCCCCeEEeecCCCCCceEEEecCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCC
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---------ccC-CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhcCCCCCCC
Q 005679 634 ---------LWQ-NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL 683 (683)
Q Consensus 634 ---------l~~-~g~N~f~~~~~~~~~~lS~~~~~fiaGiL~h~~al~a~~~Pt~NSY~ 683 (683)
+|+ +|+|+|. +++++.+||+++++||||||+|+|+++||++||+|||+
T Consensus 232 GsG~H~h~Sl~~~~G~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P~~NSYk 289 (443)
T 4hpp_A 232 TNGVHLHLSLQHADGSPLLY--EPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYL 289 (443)
T ss_dssp CCCEEEEEEEEETTSCBSSB--CTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSGGGHH
T ss_pred cccceeeeeeecCCCCcccc--CCCCccchhHHHHHHHHHHHHHHHHHHHHhCCCCcchh
Confidence 665 4799998 44456689999999999999999999999999999995
No 3
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=100.00 E-value=7.1e-60 Score=523.30 Aligned_cols=270 Identities=23% Similarity=0.406 Sum_probs=237.8
Q ss_pred hhhhhccCCceEEEEEEecCCCCceeEEEechhhhHHHhhcCcccccccc-ccccccCCCCCCCCCCCCccEEEEeecCC
Q 005679 399 KKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLST 477 (683)
Q Consensus 399 ~~~~~~~~~i~~V~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~gd~~l~PD~~T 477 (683)
+...+++.+|+||+++|+|++|++|+|.||+++|.+.+.++|++++++++ ++.. .+.+|++|+||++|
T Consensus 8 ~~~~~~~~~i~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgss~~g~~~-----------~~~sD~~l~PD~~T 76 (473)
T 3ng0_A 8 VLKWIQDENIKIIDLKFIDTPGIWQHCSFYYDQLDENSFTEGIPFDGSSIRGWKA-----------INESDMCMVPDPNT 76 (473)
T ss_dssp HHHHHHHTTCCEEEEEEECSSSCEEEEEEEGGGCCGGGGTTCEEEETTSSTTSCC-----------GGGCEEEEEECGGG
T ss_pred HHHHHHhCCCCEEEEEEECCCCCEEEEEEeHHHHHHHHHhCCCcccccccccccc-----------CCCCcEEEEeecCc
Confidence 45667888999999999999999999999999998744578999988764 2210 14679999999999
Q ss_pred ceeccCCCC-cceEEEEeecC-CCCcCCCChHHHHHHHHHHHHHhcCC--eeeeeeeeEEEEEeeccc------------
Q 005679 478 RWRIPWQKQ-EEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLR------------ 541 (683)
Q Consensus 478 l~~~pw~~~-~a~v~~d~~~~-~g~p~~~cPR~~L~r~~~~~~~~~G~--~~~~g~E~EF~l~~~~~~------------ 541 (683)
++++||.++ +++|+||++++ +|+|++.|||++|||++++++ +.|+ ++.+|+|+|||||++...
T Consensus 77 ~~~~Pw~~~~~a~v~cd~~~~~~g~p~~~~pR~iLkr~~~~~~-~~G~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~ 155 (473)
T 3ng0_A 77 ATIDPFCKEPTLSMICSIKEPRTGEWYNRDPRTIAAKAAEYLR-GTGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFAD 155 (473)
T ss_dssp CEECTTCSSCEEEEEEEEECTTTSSBCTTCHHHHHHHHHHHHH-HHTSCSEEEEEEEECEEEESEEEEEECSSCEEEEEE
T ss_pred cEECCcCCCCcEEEEEEEeECCCCCCCCCChHHHHHHHHHHHH-HcCCCcceEEEeeeEEEEEeeccccccccccccccc
Confidence 999999986 89999999998 999999999999999999998 4566 899999999999985210
Q ss_pred --C-----------CCCCcccCCCCCcccCCcccchHHHHHHHHHHHHhCCCceeEeeccCC-CCceEEecCcChHHHHH
Q 005679 542 --E-----------GKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAG-KGQFEIALGHTVAAKAA 607 (683)
Q Consensus 542 --~-----------~~~~~~p~~~~~~~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~-pGQ~Ei~l~~~~~l~aa 607 (683)
. +..++.|.++++|+...+.+...+++++|++.|+++||+||++|+|+| ||||||++.|++++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~g~~~~~~~~y~~~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~~pGQ~Ei~~~~~~~l~aA 235 (473)
T 3ng0_A 156 SVEGRWNTGREEEGGNLGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSA 235 (473)
T ss_dssp CTTCGGGTTCCCTTCCCCCCCCTTCCSSCCTTTCCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHH
T ss_pred ccccccccccccccCCCCcccCCCccccccCccchhHHHHHHHHHHHHHCCCCeEEeecCcCCCCceEEEccCCCHHHHH
Confidence 0 011234556678888888888999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEeeec---------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhH
Q 005679 608 DNLIFTREVLRAVARKHGLLATFVPN---------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSIL 672 (683)
Q Consensus 608 D~~~~~k~~ik~vA~~~G~~ATFmpK---------------l~~~g~N~f~~~~~~~~~~lS~~~~~fiaGiL~h~~al~ 672 (683)
|+++++|++||+||++||+.|||||| ||++|+|+|.+ ++ ..+||+++++||||||+|+|+++
T Consensus 236 D~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GSG~H~H~Sl~~~g~n~F~~--~~-~~~lS~~~~~fiaGlL~h~~~l~ 312 (473)
T 3ng0_A 236 DNLMIYKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLWKDGQPLFAG--DK-YAGFSQMGLWYIGGILKHAPALL 312 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTBS--SS-GGGBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEcCcccCCCCCCeeEEEEeeccCCccccCC--CC-ccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 77889999984 32 56899999999999999999999
Q ss_pred hhhcCCCCCCC
Q 005679 673 AFTAPVPNRLL 683 (683)
Q Consensus 673 a~~~Pt~NSY~ 683 (683)
||+|||+|||+
T Consensus 313 a~~~Pt~NSYk 323 (473)
T 3ng0_A 313 AFTNPTTNSYK 323 (473)
T ss_dssp HHHSCSTTHHH
T ss_pred HHhCCCcchhh
Confidence 99999999995
No 4
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=100.00 E-value=1.6e-59 Score=510.57 Aligned_cols=363 Identities=29% Similarity=0.430 Sum_probs=306.6
Q ss_pred hHHHHHHhccCCcccccCCCcccCCC---CcchhhccccccCCCCCCCCcchhHHHHHHHHHHHhCCCC--CHHHHHHHH
Q 005679 3 FEELREVVENIELVDGHAHNIVSLDS---SFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDS--SLQAVEEYR 77 (683)
Q Consensus 3 ~~~l~~~i~~~p~iD~H~H~~~~~~~---~~~~~~~~~ea~~~~~~~~~~~l~~~~~~~~l~~~fg~~~--~~~~i~~~~ 77 (683)
.++|+++|+++|||||||||+++.+. .+||+.++|||+++++ .++++.++. .+++++ |||++ |+++||++|
T Consensus 2 ~~~l~~~~~~~~~id~h~h~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~~~--~~~~~~-fg~~~~~~a~~i~~~~ 77 (376)
T 2qpx_A 2 MDDLSEFVDQVPLLDHHCHFLIDGKVPNRDDRLAQVSTEADKDYP-LADTKNRLA--YHGFLA-LAKEFALDANNPLAAM 77 (376)
T ss_dssp CCCCHHHHHHCCEEEEEECCBBCTTCSCHHHHHHHHTSSCCTTSC-HHHHTTSHH--HHHHHH-HHHHHCSSTTSTTCCC
T ss_pred hHHHHHHHhcCCccccCCccccCcccccccCchHhhhccCCCccc-cccChhhHH--HHHHHh-CCCCCCCCHHHHHHHH
Confidence 35789999999999999999999874 4799999999999886 333444443 445556 99998 788899999
Q ss_pred HHcChhhHHHHHHhhCCcEEEEEecCCC-CCCCCChHHHhhhcCC-CCeEEecchHHHHHHHhhCCCCCcccHHHHHHHH
Q 005679 78 RAAGLQSICSICFEAANISAVLIDDGLK-LDKKHGLDWHKSLVPF-VGRILRIERLAEEILDQASPDGSIWTLDVFIETF 155 (683)
Q Consensus 78 ~~l~~~~~~r~ll~~~~v~~~~~d~g~~-~d~~~~~~~h~~~~~~-~~~i~rie~~~~~~~~~~~~~~~~~~~~~~~~al 155 (683)
|++++++++|+||+++||+++|+|||+. +||+++++||+++++. +.+|+|||.+++..... +.+|++|+++|
T Consensus 78 ~~~~~~~~~r~~l~~~~v~~~~~dt~~~~ddp~~~l~~h~~~~~~~~~~~~~ie~~~~~~~~~------~~~~~~~~~~~ 151 (376)
T 2qpx_A 78 NDPGYATYNHRIFGHFHFKELLIDTGFVPDDPILDLDQTAELVGIPVKAIYRLETHAEDFMLE------HDNFAAWWQAF 151 (376)
T ss_dssp CHHHHHHHHHHHHHHTTEEEEEEETTCCCSSBCCCHHHHHHHHTSCEEEEEEHHHHHHHHHTT------CSSHHHHHHHH
T ss_pred HhcCHhHHHHHHHHHCCceEEEecCCCCCCCCCCCHHHHHHhcCcchhheeccchHHHHHhcc------cccHHHHHHHH
Confidence 9999999999999999999999999974 4679999999999864 57999999987755443 34799999999
Q ss_pred HHHHHhhc-ccceeeeeeeccccCCCCCCCCCHHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEec
Q 005679 156 LKQLRSAA-NKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHT 234 (683)
Q Consensus 156 ~~~l~~~~-~~~vgfksi~~y~~gl~~~~~~~~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~l~e~a~e~glpvq~H~ 234 (683)
+++|+++. .|+||||||.||++||++.+ +++++++++|+|++.++ +..++++.+.++++|++++.|+++|||||+|+
T Consensus 152 ~~~l~~~~~~g~~gfksv~~~~~gl~~~~-~~~~~a~~~~~~~~~~~-~~~~~d~~~~p~~l~~~~e~a~e~glpv~iH~ 229 (376)
T 2qpx_A 152 SNDVKQAKAHGFVGFKSIAAYRVGLHLEP-VNVIEAAAGFDTWKHSG-EKRLTSKPLIDYMLYHVAPFIIAQDMPLQFHV 229 (376)
T ss_dssp HHHHHTTTTTTCCCEEECHHHHTCSCCCC-CCHHHHHHHHHHHHHHC-CCSCCCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHCCCceeccceEecCCCCCCC-CCHHHHHHHHHHHHcCC-CCCccchhHhHHHHHHHHHHHHHCCCeEEEEe
Confidence 99999985 69999999999999998544 67999999999999754 57888999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEeccccccCCccHHHHHHHHHHHHhh
Q 005679 235 GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLEL 314 (683)
Q Consensus 235 G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~ 314 (683)
|.++.+.+...+.|..+..++++.+||+++||+.| |+|+.+++..++..|||||+|+|| +++..+.++...++++++.
T Consensus 230 g~~d~~~~~~~~~p~~l~~ll~~~~~P~lkiVl~H-g~~~~~~~~~l~~~~~nvy~d~s~-~~~~~~~~~~~~l~~l~~~ 307 (376)
T 2qpx_A 230 GYGDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLH-CYPYHREAGYLASVFPNLYFDISL-LDNLGPSGASRVFNEAVEL 307 (376)
T ss_dssp SCCCTTSCGGGCCGGGGHHHHHHHGGGTCCEEEEE-CTTCHHHHHHHHHHSTTEEEECTT-HHHHSGGGHHHHHHHHTSS
T ss_pred CCCCCCCCccccCHHHHHHHHhcCCCCCCcEEEEC-CCccHHHHHHHHHhCCCEEEeccc-ccccChhhHHHHHHHHHHh
Confidence 98766666777888889999985569999999999 899999999999999999999999 3333344778899999999
Q ss_pred CCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhH-HHHHHHHHHHHHHHHHhcCCCC
Q 005679 315 APTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE-AIEVAKDIFALNAAQFYKINLG 383 (683)
Q Consensus 315 ~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~e-a~~~~~~I~~~NA~rly~l~~~ 383 (683)
+|.+|||||||++.+|+.+|++++++++.+++++++. .++..+ .++.+++|+++||+|||+++.+
T Consensus 308 ~g~dRiLfGSD~P~~~e~~~~~~~~~~~~l~~l~~~~----~ls~~~~~~~~~~~I~~~NA~rlf~l~~~ 373 (376)
T 2qpx_A 308 APYTRILFASDASTYPEMYGLAARQFKQALVAHFNQL----PFVDLAQKKAWINAICWQTSAKLYHQERE 373 (376)
T ss_dssp SCGGGEECCCCCCBSHHHHHHHHHHHHHHHHHHHHTC----SSCCHHHHHHHHHHHHTHHHHHHTTCGGG
T ss_pred cCCCCEEEECCCCccchhhcccHHHHHHHHHHHHccc----CcchhhcCHHHHHHHHHHhHHHHhCCCCC
Confidence 9999999999988777666777888899998877531 233222 3466999999999999999643
No 5
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=100.00 E-value=2.2e-57 Score=506.46 Aligned_cols=273 Identities=26% Similarity=0.385 Sum_probs=237.1
Q ss_pred hhhhhhccCCceEEEEEEecCCCCceeEEEechhhhHHHhhcCcccccccc-ccccccCCCCCCCCCCCCccEEEEeecC
Q 005679 398 LKKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLS 476 (683)
Q Consensus 398 ~~~~~~~~~~i~~V~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~gd~~l~PD~~ 476 (683)
.++.++++.+|+||+++|+|+.|++|+|.||+++|.+.+.++|++|+++++ ++.. ...+|++|+||++
T Consensus 16 dv~~~i~~~~I~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgssi~G~~~-----------~~~sD~~l~PD~~ 84 (486)
T 4acf_A 16 DVFKLAKDEKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDDGLAFDGSSIRGFQS-----------IHESDMLLLPDPE 84 (486)
T ss_dssp HHHHHHHHTTCCEEEEEEECSSSCEEEEEEEGGGCSHHHHHTCEEEEGGGSTTSCC-----------GGGCEEEEEECGG
T ss_pred HHHHHHHHCCCcEEEEEEECCCCcEEEEEEEHHHHHHHHHHCCCeeeccccccccc-----------CCCCCEEEEEccc
Confidence 456778899999999999999999999999999998766788999988764 2211 1346999999999
Q ss_pred CceeccCCCCc-ceEEEEeecC-CCCcCCCChHHHHHHHHHHHHHh-cCCeeeeeeeeEEEEEeeccc----C-------
Q 005679 477 TRWRIPWQKQE-EMIMADMHLK-PGEPWEYCPREALRKVSRLLKEE-FNLVLNAGFEIEFYLLKSVLR----E------- 542 (683)
Q Consensus 477 Tl~~~pw~~~~-a~v~~d~~~~-~g~p~~~cPR~~L~r~~~~~~~~-~G~~~~~g~E~EF~l~~~~~~----~------- 542 (683)
|++++||.++. +.|.|+++++ +|+|++.|||++|||++++++++ +|+++.+|+|+|||||++... +
T Consensus 85 T~~~~Pw~~~~~~~v~~~~~d~~~g~P~~~~pR~iLk~~~~~~~~~g~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~ 164 (486)
T 4acf_A 85 TARIDPFRAAKTLNINFFVHDPFTLEPYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVD 164 (486)
T ss_dssp GCEECSSCSSCEEEEEEEEECTTTCCBCTTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEE
T ss_pred eeEECCcCCCccEEEEEEEeeCCCCCCCCCCchHHHHHHHHHHHHcCCcceecccceeEEEEeccccccccccCCcccCC
Confidence 99999999875 5688999875 79999999999999999999854 466899999999999975210 0
Q ss_pred ---------------C--CCCcccCCCCCcccCCcccchHHHHHHHHHHHHhCCCceeEeeccCCC-CceEEecCcChHH
Q 005679 543 ---------------G--KEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGK-GQFEIALGHTVAA 604 (683)
Q Consensus 543 ---------------~--~~~~~p~~~~~~~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~p-GQ~Ei~l~~~~~l 604 (683)
+ ...+.+.+..+||+..+.+...+++++|++.|+++||+||++|+|+|| |||||++.|+++|
T Consensus 165 ~~~g~~~~~~~~~~~g~p~~~~~~~~~~~y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gp~GQ~Ei~~~~~~~l 244 (486)
T 4acf_A 165 AISGWWNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLL 244 (486)
T ss_dssp CTTBGGGTTCSBCTTSCBCCCCCBCTTCCSSBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHH
T ss_pred ccccccCCCCcccCCCCCCCCcccccCCccccCCcchhHHHHHHHHHHHHHhCCceEEeeeeeeeccceeEEeccCcchh
Confidence 0 011233445678888888899999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCeEEeeec---------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHH
Q 005679 605 KAADNLIFTREVLRAVARKHGLLATFVPN---------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLS 669 (683)
Q Consensus 605 ~aaD~~~~~k~~ik~vA~~~G~~ATFmpK---------------l~~~g~N~f~~~~~~~~~~lS~~~~~fiaGiL~h~~ 669 (683)
++||+++++|++||+||++||+.|||||| +|++|+|+|+ ++++..+||+++++||||||+|+|
T Consensus 245 ~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGll~h~~ 322 (486)
T 4acf_A 245 HAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWKDGAPLMY--DETGYAGLSDTARHYIGGLLHHAP 322 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEESSB--CTTSGGGBCHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHcCCeEEEeeccccCCCcccceeeeeeccCCCcccc--ccccccccchHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999 7888999999 455667899999999999999999
Q ss_pred HhHhhhcCCCCCCC
Q 005679 670 SILAFTAPVPNRLL 683 (683)
Q Consensus 670 al~a~~~Pt~NSY~ 683 (683)
+++||++||+|||+
T Consensus 323 ~l~a~~~PtvNSYk 336 (486)
T 4acf_A 323 SLLAFTNPTVNSYK 336 (486)
T ss_dssp HHHHHHSCSTTHHH
T ss_pred cceeeecCCCcchh
Confidence 99999999999995
No 6
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=3.4e-57 Score=502.18 Aligned_cols=269 Identities=23% Similarity=0.345 Sum_probs=236.8
Q ss_pred hhhhccCCceEEEEEEecCCCCceeEEEechhhhHHHhhcCcccccccc-ccccccCCCCCCCCCCCCccEEEEeecCCc
Q 005679 400 KSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTR 478 (683)
Q Consensus 400 ~~~~~~~~i~~V~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~gd~~l~PD~~Tl 478 (683)
...+++.+|+||+++|+|+.|++|+|.||+++|.+.+.+.|+++++++. ++.. .+.+|++|+||++|+
T Consensus 6 ~~~~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~fdgss~~g~~~-----------~~~sD~~l~PD~~T~ 74 (468)
T 1f52_A 6 LTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKG-----------INESDMVLMPDASTA 74 (468)
T ss_dssp HHHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSCC-----------SSCCEEEEEECGGGC
T ss_pred HHHHHhCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHhhCceeecccccccccc-----------CCCCCEEEEEecCCc
Confidence 4556778999999999999999999999999999844567999887653 2210 246799999999999
Q ss_pred eeccCCC-CcceEEEEeecC-CCCcCCCChHHHHHHHHHHHHHhcCC--eeeeeeeeEEEEEeecc----c---------
Q 005679 479 WRIPWQK-QEEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVL----R--------- 541 (683)
Q Consensus 479 ~~~pw~~-~~a~v~~d~~~~-~g~p~~~cPR~~L~r~~~~~~~~~G~--~~~~g~E~EF~l~~~~~----~--------- 541 (683)
+++||.+ ++++|+||++++ +|+|++.|||++|||++++++ ++|+ ++.+|+|+|||||++.. .
T Consensus 75 ~~~Pw~~~~~~~v~~d~~~~~~G~p~~~~pR~ilk~~~~~l~-~~G~~~~~~~G~E~EFfl~~~~~~~~~~~~~~~~~~~ 153 (468)
T 1f52_A 75 VIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLR-ATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDD 153 (468)
T ss_dssp EECSSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHH-HHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEEC
T ss_pred EEccccCCCceEEEEEEEeCCCCCcCCCCHHHHHHHHHHHHH-HcCCCcceEEEeeeEEEEEeccccccCCccccccccc
Confidence 9999987 489999999999 799999999999999999998 6899 89999999999998521 0
Q ss_pred -C-----------CCCCcccCCCCCcccCCcccchHHHHHHHHHHHHhCCCceeEeeccCCCC-ceEEecCcChHHHHHH
Q 005679 542 -E-----------GKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKG-QFEIALGHTVAAKAAD 608 (683)
Q Consensus 542 -~-----------~~~~~~p~~~~~~~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~pG-Q~Ei~l~~~~~l~aaD 608 (683)
+ +..++.|.++++||+..+.+...+++++|++.|+++||+||+.|+|+||| ||||++.|++++++||
T Consensus 154 ~~~~~~~~~~~~~~~~g~~~~~~~~Y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~apggQ~Ei~~~~~~~l~aAD 233 (468)
T 1f52_A 154 IEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKAD 233 (468)
T ss_dssp TTCGGGGGCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHH
T ss_pred cccccCCCccccccCCCCCCCCCCCccCCCccccHHHHHHHHHHHHHHCCCCeEEeecCCCCceeEEEeccCCCHHHHHH
Confidence 0 00123455677898888888999999999999999999999999999996 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCeEEeeec---------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHh
Q 005679 609 NLIFTREVLRAVARKHGLLATFVPN---------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILA 673 (683)
Q Consensus 609 ~~~~~k~~ik~vA~~~G~~ATFmpK---------------l~~~g~N~f~~~~~~~~~~lS~~~~~fiaGiL~h~~al~a 673 (683)
+++++|++||+||++||+.|||||| ||++|+|+|.+ + +..+||+++++||||||+|+|+|+|
T Consensus 234 ~~~~~k~~vk~vA~~hGl~atFmpKP~~g~~GSG~H~h~Sl~~~g~Nlf~~--~-~~~~ls~~~~~~iaGll~h~~~l~a 310 (468)
T 1f52_A 234 EIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFSG--D-KYAGLSEQALYYIGGVIKHAKAINA 310 (468)
T ss_dssp HHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTBC--S-SGGGBCHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEeCCCCCCCCCCCcceeeccccCCCcccCC--C-CcchHHHHHHHHHHHHHHHHHHhHh
Confidence 9999999999999999999999999 77889999973 2 3457999999999999999999999
Q ss_pred hhcCCCCCCC
Q 005679 674 FTAPVPNRLL 683 (683)
Q Consensus 674 ~~~Pt~NSY~ 683 (683)
|++||+|||+
T Consensus 311 ~~ap~~NSYk 320 (468)
T 1f52_A 311 LANPTTNSYK 320 (468)
T ss_dssp HHSCSGGGGG
T ss_pred HhcCCccchh
Confidence 9999999995
No 7
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=100.00 E-value=1.7e-56 Score=487.31 Aligned_cols=360 Identities=16% Similarity=0.140 Sum_probs=295.5
Q ss_pred HHHHHHhccCCcccccCCCcccCCC-Ccchhhcc-------------------------ccccCC----C-CCCCCcchh
Q 005679 4 EELREVVENIELVDGHAHNIVSLDS-SFPFIQSF-------------------------SEATGP----A-LSYAPYSLS 52 (683)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~~-~~~~~~~~-------------------------~ea~~~----~-~~~~~~~l~ 52 (683)
.+|++.++++||||+|||....... +.+|+.++ .+++.. + .+.++++.|
T Consensus 27 ~~Ly~~~~~~PIiD~HcHl~p~~i~~~~~F~ni~e~wl~gDHYkwr~mRa~Gv~e~~itg~~~~~ekf~~~a~~~~~~~G 106 (463)
T 1j5s_A 27 VRLFNEVKDLPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFVG 106 (463)
T ss_dssp HHHHHHHTTSCEEESCCCCCHHHHHHTCCCSCHHHHHTTTCHHHHHHHHHTTCCGGGTTSSSCHHHHHHHHHHHGGGGTT
T ss_pred HHHHHHhccCCeecCccCCCHHHhccccCcccHHHHhccCchHHHHHHhhcCCChhhhcCCCCHHHHHHHHHhhhHHhcC
Confidence 4688888999999999998876421 24455554 222210 1 123344444
Q ss_pred ---HHHHHHHHHHHhCCCC-----CHHHHHHHHHHcChhhHHHHHHhhCCcEEEEEecCCCCCCCCChHHHhhhc-----
Q 005679 53 ---FKRNLKNIAELYGCDS-----SLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLV----- 119 (683)
Q Consensus 53 ---~~~~~~~l~~~fg~~~-----~~~~i~~~~~~l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~----- 119 (683)
+.|+|++|+++||+++ ||++||++||++.+++++|+||+++||++||| |+||+++++||++++
T Consensus 107 nply~W~hlel~~~FGi~~~l~~~ta~~i~~~~~e~l~~~~~r~ll~~snV~~v~t----TddP~D~Le~h~~l~~~~~~ 182 (463)
T 1j5s_A 107 NPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCT----TDDPVSTLEHHRKAKEAVEG 182 (463)
T ss_dssp SHHHHHHHHHHHHHSCCCCCCSHHHHHHHHHHHHHHSTTCCHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhchhhhHHHHHHHcCCEEEEe----CCCCCCchHHHHHHhcCCCC
Confidence 7889999999999997 89999999999558899999999999999999 889999999999942
Q ss_pred ----C--CCCeEEecchHHH-HHHHhhCC--CCCcccHHHHHHHHHHHHHhhcccceeeeee--eccccCC--CCCCCCC
Q 005679 120 ----P--FVGRILRIERLAE-EILDQASP--DGSIWTLDVFIETFLKQLRSAANKIVGLKSI--AAYRSGL--EINPHVT 186 (683)
Q Consensus 120 ----~--~~~~i~rie~~~~-~~~~~~~~--~~~~~~~~~~~~al~~~l~~~~~~~vgfksi--~~y~~gl--~~~~~~~ 186 (683)
+ |||++++||.... ++++++.. +.+|.+|++|++|+++|+++| +++ .+++||| +..++++
T Consensus 183 ~~v~P~~RPD~~~~ie~~~f~~~v~~L~~~sg~~i~s~~~~~~Al~~r~~~F-------~~~G~~asdhgl~~~~~~~~s 255 (463)
T 1j5s_A 183 VTILPTWRPDRAMNVDKEGWREYVEKMGERYGEDTSTLDGFLNALWKSHEHF-------KEHGCVASDHALLEPSVYYVD 255 (463)
T ss_dssp CEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHH-------HTTTCCEEEEEESSCCCCCCC
T ss_pred ceeeeccCcchhcccCchhHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHH-------HHcCcEEEccCCCcccCCCCC
Confidence 1 7889999996544 67777643 446789999999999999964 444 3468998 6555589
Q ss_pred HHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCCCC-------------CCCCCCCCC-c--cc
Q 005679 187 KKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGD-------------KDLDLRLSN-P--LH 250 (683)
Q Consensus 187 ~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd-------------~~~~~~~~~-p--~~ 250 (683)
++|++++|+|+++++.....+...+..+++..+.++|.|+|||||+|+|++. .|+|..... + ..
T Consensus 256 ~~e~~~if~k~l~g~~ls~~e~~~~~~~ll~~l~~~~~e~g~~mQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~~ 335 (463)
T 1j5s_A 256 ENRARAVHEKAFSGEKLTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEG 335 (463)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEeecCCCCCCHHHHHHhCCCCCCCCccccchHHHH
Confidence 9999999999998754455566778888899999999999999999999943 345543322 2 24
Q ss_pred hHHHHhhcCCCC-ceEEEecCCCCcHHHHHHHHhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEE-EecCCCC
Q 005679 251 LRAILEDKRFSK-CRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYA 328 (683)
Q Consensus 251 L~~l~~~~~~P~-l~~vl~H~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~ 328 (683)
|..+++ ++++ .|+|+.|+.-.+.+++++|+++|||||+|.+|||++. +.||.+++++++|++|++|++ |+||+|+
T Consensus 336 L~~lL~--~~~~~~k~iLy~Lnp~~~~~la~lag~Fp~vq~g~~WWf~d~-~~gm~~~l~~l~e~~~lskfvGmlTDsRs 412 (463)
T 1j5s_A 336 LRYFLN--EFDGKLKIVLYVLDPTHLPTISTIARAFPNVYVGAPWWFNDS-PFGMEMHLKYLASVDLLYNLAGMVTDSRK 412 (463)
T ss_dssp HHHHHH--HSTTTSCEEEEESSGGGHHHHHHHHHHCTTEEECCCCSTTCS-HHHHHHHHHHHHTTSCGGGCCCCCCCCSS
T ss_pred HHHHHH--hcccCCCeEEEecCHhhHHHHHHHHccCCccccCCchhhcCC-HHHHHHHHHHHHHhcchhccccccccchH
Confidence 888888 6877 8888888833389999999999999999999999865 889999999999999999999 9999999
Q ss_pred Cccchh-hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhc
Q 005679 329 SPETYF-LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (683)
Q Consensus 329 ~Pe~~~-~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~ 379 (683)
| .+| ++|++|||+||++|++||++|+++.+++++++++|||+||+++|+
T Consensus 413 f--LsY~~rhe~fRRiLc~~Lg~~Ve~G~~p~~~~~~iv~~I~y~NA~~~f~ 462 (463)
T 1j5s_A 413 L--LSFGSRTEMFRRVLSNVVGEMVEKGQIPIKEARELVKHVSYDGPKALFF 462 (463)
T ss_dssp T--THHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHC
T ss_pred H--hhccHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHhC
Confidence 9 478 899999999999999999999999888999999999999999996
No 8
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0
Probab=100.00 E-value=9.6e-55 Score=468.14 Aligned_cols=362 Identities=15% Similarity=0.162 Sum_probs=304.9
Q ss_pred HHHHH-HhccCCcccccCCCcccC-----------------C---------CCcchhhccc-cccCCC----C-CCCCcc
Q 005679 4 EELRE-VVENIELVDGHAHNIVSL-----------------D---------SSFPFIQSFS-EATGPA----L-SYAPYS 50 (683)
Q Consensus 4 ~~l~~-~i~~~p~iD~H~H~~~~~-----------------~---------~~~~~~~~~~-ea~~~~----~-~~~~~~ 50 (683)
.+|++ .+.++||||-|||---.+ | .+.|.+.+++ ++++.. . +..|..
T Consensus 20 r~LYh~~a~~lPIiDyH~Hl~P~~iaen~~F~nit~lwl~gDHYkwR~mrs~Gv~e~~itG~~a~~~ekf~~~A~t~p~~ 99 (473)
T 3iac_A 20 RTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETSDYEKYMAWANTVPKT 99 (473)
T ss_dssp HHHHHHTTTTSCEEECSCCCCHHHHHHTCCCSCHHHHHHSSCSHHHHHHHHTTCCGGGTTCTTSCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCCEECCCCCCCHHHhccCCCCCCHHHHhccCchHHHHHHHHcCCCHHHccCCCCChHHHHHHHHHHHHHh
Confidence 36884 899999999999965431 1 2356777766 554321 1 123333
Q ss_pred h---hHHHHHHHHHHHhCCCC------CHHHHHHHHHH-c-ChhhHHHHHHhhCCcEEEEEecCCCCCCCCChHHHhhhc
Q 005679 51 L---SFKRNLKNIAELYGCDS------SLQAVEEYRRA-A-GLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLV 119 (683)
Q Consensus 51 l---~~~~~~~~l~~~fg~~~------~~~~i~~~~~~-l-~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~ 119 (683)
+ .|.|+|+||+++||+++ ||++||++||+ | ++++.+|.||+++||++||| ||||+|+|+||++++
T Consensus 100 ~gnPly~W~hleL~r~FGi~~~~L~~~tA~~I~d~~n~~L~~~~f~~r~L~~~~nVe~v~T----TDDP~D~L~~H~~i~ 175 (473)
T 3iac_A 100 LGNPLYHWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGT----TDDPIDSLEYHRQIA 175 (473)
T ss_dssp TTSHHHHHHHHHHHTTTCCCSCCCSHHHHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCHHHHHHHCCcEEEEe----CCCccccHHHHHHHH
Confidence 3 37889999999999986 99999999999 5 89999999999999999999 999999999999876
Q ss_pred C------------CCCeEEecchHHH-HHHHhhCC--CCCcccHHHHHHHHHHHHHhhcccceeeeeeecc--ccCCCCC
Q 005679 120 P------------FVGRILRIERLAE-EILDQASP--DGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAY--RSGLEIN 182 (683)
Q Consensus 120 ~------------~~~~i~rie~~~~-~~~~~~~~--~~~~~~~~~~~~al~~~l~~~~~~~vgfksi~~y--~~gl~~~ 182 (683)
. |||+++.||...+ +++++|++ +.+|.+|++|++||++|+++ |++.||. +||++..
T Consensus 176 ~~~~f~~~VlPtfRPD~a~~i~~~~f~~yv~~L~~~sg~~i~~~~~ll~AL~~R~~~-------F~~~Gcr~sDHgl~~~ 248 (473)
T 3iac_A 176 ADDSIDIEVAPSWRPDKVFKIELDGFVDYLRKLEAAADVSITRFDDLRQALTRRLDH-------FAACGCRASDHGIETL 248 (473)
T ss_dssp HCTTCCSEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHH-------HHHTTCCEEEEEESSC
T ss_pred hcCCCCceEeeccCCccccCCCchhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-------HHHcCcEehhcCCccc
Confidence 3 7999999998766 78888864 56799999999999999995 5666666 6999865
Q ss_pred CC---CCHHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCC------------C-CCCCCCCC-
Q 005679 183 PH---VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLDLRL- 245 (683)
Q Consensus 183 ~~---~~~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~l~e~a~e~glpvq~H~G~------------G-d~~~~~~~- 245 (683)
.+ ++.+|++++|+|+++++.....+...+..++++.+.+++.|.||+||+|.|+ | |+|.|...
T Consensus 249 ~~~~~~s~~e~~~if~k~l~G~~ls~~e~~~f~~~~l~~la~~~~e~gwvmQlH~Ga~Rn~n~~~f~~lG~D~G~D~~~d 328 (473)
T 3iac_A 249 RFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGFDSIGD 328 (473)
T ss_dssp CCCCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECCCCHHHHHHHCSSSSCCEECC
T ss_pred ccCCCCCHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHCCCeeeeecccccCCCHHHHHHhCCCCCCCCCCC
Confidence 43 5789999999999997655666778888889999999999999999999998 5 46666432
Q ss_pred ---CCcc--chHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCe------eEeccccccCCccHHHHHHHHHHHHhh
Q 005679 246 ---SNPL--HLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ------VYLDFGLAIPKLSVQGMISSIKELLEL 314 (683)
Q Consensus 246 ---~~p~--~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pn------Vy~d~s~~~~~~~~~g~~~~l~~~le~ 314 (683)
+.++ +|+.+-+.+++|+++++.+++. +.++++.|+++||+ ||++.+|||++. ++||+++++.+.+.
T Consensus 329 ~~~~~~L~~lLd~~~~~~~LpktILy~Lnp~--~n~~latlag~F~~~~~~gkvq~G~~WWFnD~-~~GM~rq~~~l~~~ 405 (473)
T 3iac_A 329 NNISWALSRLLDSMDVTNELPKTILYCLNPR--DNEVLATMIGNFQGPGIAGKVQFGSGWWFNDQ-KDGMLRQLEQLSQM 405 (473)
T ss_dssp CCCHHHHHHHHHHHHTTTCCCEEEEEESSGG--GHHHHHHHGGGSCCTTSTTSEEECCCCGGGCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCeeeEEeCCcc--chHHHHHHHhhcCCCCcCceeEecCcccccCC-HHHHHHHHHHHHHh
Confidence 2222 4556655668999999999996 68899999999999 999999999875 89999999999999
Q ss_pred CCCCcEE-EecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHH--HHHHHHHHHHHHHHHhcCC
Q 005679 315 APTKKVM-FSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEA--IEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 315 ~~~~kil-fgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea--~~~~~~I~~~NA~rly~l~ 381 (683)
++++|++ |.||+|+|.+ |++|++|||+||++|++||++|+++.+++ ++++++|||+||+++|+++
T Consensus 406 g~l~~fvGmltDSRsFlS--y~RHeyfRRilc~~lg~~Ve~G~~p~D~~~l~~iv~dI~y~nak~yF~~~ 473 (473)
T 3iac_A 406 GLLSQFVGMLTDSRSFLS--YTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK 473 (473)
T ss_dssp SCGGGCCCCCCCCSCTTT--THHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHTHHHHHHTSCC
T ss_pred hhhhcccccccchHhhhh--hHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHhHHHHHhCCC
Confidence 9999999 9999999985 59999999999999999999999999988 9999999999999999974
No 9
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=100.00 E-value=4.3e-54 Score=472.17 Aligned_cols=366 Identities=15% Similarity=0.145 Sum_probs=295.0
Q ss_pred HHHHHHhccCCcccccCCCcccC---C-----------------------CCcchhh--c-----cccccCC--------
Q 005679 4 EELREVVENIELVDGHAHNIVSL---D-----------------------SSFPFIQ--S-----FSEATGP-------- 42 (683)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~---~-----------------------~~~~~~~--~-----~~ea~~~-------- 42 (683)
.+|++.++++||||-|||-.-.. + .+.|.+. | +.+++..
T Consensus 26 ~~Ly~~a~~~PIiDyH~Hl~p~~iaen~~f~~i~elwl~gdHYkwr~mRa~Gv~e~~~~i~~~~gtg~~~~~ekf~~~a~ 105 (497)
T 2q01_A 26 RGLYALVKDLPIISPHGHTDPSWFATNAPFQDATDLLLAPDHYLFRMLYSQGVSLDALKVRSKAGVPDTDPREAWRVFAS 105 (497)
T ss_dssp HHHHHTTTTSCEEECSCCCCTHHHHHCCCCCCHHHHTTSSCHHHHHHHHTTTCCSTTTTCCBTTBSCSSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCeecCccCCCHHHHhhcCCCCCHHHHhccCcHHHHHHHHHcCCChhhhcccccccCCCCCHHHHHHHHHH
Confidence 36888889999999999976442 1 1122222 2 2333211
Q ss_pred CCCCCCcchhHHHHHHHHHHHhCCCC-----CHHHHHHHHHH-c-ChhhHHHHHHhhCCcEEEEEecCCCCCCCCChHHH
Q 005679 43 ALSYAPYSLSFKRNLKNIAELYGCDS-----SLQAVEEYRRA-A-GLQSICSICFEAANISAVLIDDGLKLDKKHGLDWH 115 (683)
Q Consensus 43 ~~~~~~~~l~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~-l-~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h 115 (683)
.+..+..+--|.|+|++|+++|||++ |+++||++||+ + .+++.+|+||+++||++||| |+||+++++||
T Consensus 106 ~~~~~~gnPly~W~hleL~~~FGi~~~l~~~ta~~i~~~~ne~l~~~~~~~R~Ll~~snV~~v~T----TddP~D~Le~h 181 (497)
T 2q01_A 106 HFYLFRGTPSWVWLNHVFSQVFGFTEFLEASNADDYFDRITAALATDAFRPRALFDRFNIETLAT----TEGPHESLQHH 181 (497)
T ss_dssp TGGGGTTSHHHHHHHHHHHHTTCCCBCCCTTTHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTSCCHHH
T ss_pred HhHHhcCCHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhcCccchHHHHHHHcCCEEEEe----CCCCCcchhhH
Confidence 12233445558889999999999986 99999999999 5 67777999999999999999 88999999999
Q ss_pred hhhc-----C------CCCeEEecchHHH-HHHHhhCC--CCCcccHHHHHHHHHHHHHhhcccceeeeeeeccccCCCC
Q 005679 116 KSLV-----P------FVGRILRIERLAE-EILDQASP--DGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEI 181 (683)
Q Consensus 116 ~~~~-----~------~~~~i~rie~~~~-~~~~~~~~--~~~~~~~~~~~~al~~~l~~~~~~~vgfksi~~y~~gl~~ 181 (683)
++++ . |||++++||...+ ++++++.. +.+|.+|++|++||++|+++|. .+|+ .+++|||+.
T Consensus 182 ~~l~~~~f~~~v~PafRpD~~l~ie~~~f~~~v~~L~e~sg~~i~s~~~~~~AL~~r~~~F~--~~Gc---~asdhgl~~ 256 (497)
T 2q01_A 182 AAIRESGWGGHVITAYRPDAVIDFEDERSPRAFERFAETSGQDVYSWKSYLEAHRLRRQAFI--DAGA---TSSDHGHPT 256 (497)
T ss_dssp HHHHHSSCCCCEECCBCCCTTTCTTCTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHH--HTTC---CEEEECCSS
T ss_pred HHHhhCCCCceeeeccCchhhcCCCcccHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH--HcCC---EEeccCCcc
Confidence 9742 1 7899999997765 77777754 4467899999999999999752 1222 346899974
Q ss_pred CCC--CCHHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCC------------C-CCCCC----
Q 005679 182 NPH--VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLD---- 242 (683)
Q Consensus 182 ~~~--~~~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~l~e~a~e~glpvq~H~G~------------G-d~~~~---- 242 (683)
.++ ++.+|++++|+|+++++. ...+...+..+++..+.++|.++|||||+|+|+ | |.|+|
T Consensus 257 ~~~~~~s~~e~~~if~k~l~g~~-s~~e~~~~~~~ll~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~~~ 335 (497)
T 2q01_A 257 AATADLSDVEAEALFNSLVKGDV-TPEKAELFRAQMLTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIPMR 335 (497)
T ss_dssp CCCCCCCHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEECC
T ss_pred cCCCCCCHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCCCc
Confidence 433 689999999999999753 455556788899999999999999999999999 4 45554
Q ss_pred CCCCCcc--chHHHHhhcCCCCceEEEecCCCC--cHHHHHHHHhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCC
Q 005679 243 LRLSNPL--HLRAILEDKRFSKCRFVLLHASYP--FSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTK 318 (683)
Q Consensus 243 ~~~~~p~--~L~~l~~~~~~P~l~~vl~H~g~p--~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~ 318 (683)
..+++|+ +|+.+. ++|+.|+|+.|+ +| |.+++++|+++|||||+|.+|||++. +.||.+++++++|++|++
T Consensus 336 ~~~a~~L~~lL~~l~---~~~~pktILy~L-np~~y~~elatlag~Fpkvq~G~~WWF~d~-~~gm~~ql~~l~el~~ls 410 (497)
T 2q01_A 336 TEYVDALKPLLTRLG---NDPRLSIILFTL-DETTYSRELAPLAGHYPVLKLGPSWWFHDS-PEGMMRFREQVTETAGFY 410 (497)
T ss_dssp CCCTTTSHHHHHHHT---TCTTCCEEECCS-CTTHHHHTHHHHHTTCTTEEECCCCGGGCS-HHHHHHHHHHHHHHHCST
T ss_pred hHHHHHHHHHHHHHh---hcCCCCeEEEeC-CcchhHHHHHHHHccCCccccCCchhhccC-hHHHHHHHHHHHHhhchh
Confidence 3456664 344333 466677777777 55 79999999999999999999999865 889999999999999999
Q ss_pred cEE-EecCCCCCccchhh-hHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCccc
Q 005679 319 KVM-FSTDAYASPETYFL-GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKD 386 (683)
Q Consensus 319 kil-fgSD~~~~Pe~~~~-~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~~~~~~ 386 (683)
|++ |+||+|+|++ |+ +|++|||+||++|++||.+|.|+.+||.+++++|+++||+|+|+|+..|..
T Consensus 411 kfvGmlTDsRsflS--y~~RheyfRRiLc~vLg~~V~~~~lse~eA~r~a~~l~~~Na~r~Y~l~~~~~~ 478 (497)
T 2q01_A 411 NTVGFNDDTRAFLS--IPARHDVARRVDSAFLARMVAEHRMDLVEAEELIVDLTYNLPKKAYKLDQRPDW 478 (497)
T ss_dssp TBCCCCCCCSCGGG--HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHTTCCSCCTT
T ss_pred cccccccchhHhhh--hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhHHHHhCCCCCccc
Confidence 999 9999999986 66 999999999999999999999999999999999999999999999987753
No 10
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=1.3e-54 Score=474.47 Aligned_cols=257 Identities=23% Similarity=0.243 Sum_probs=219.6
Q ss_pred hhhhccCCceEEEEEEecCCCCceeEEEechhhhHHHhhcCccccccccccccccCCCCCCCCCCC-CccEEEEeecCCc
Q 005679 400 KSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSG-TGEIRLMPDLSTR 478 (683)
Q Consensus 400 ~~~~~~~~i~~V~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~-~gd~~l~PD~~Tl 478 (683)
...+++.+|+||+++|+|++|++|+|.||+++|.+ + .+|+++++++ . ..+.. ..+ .+|++|+||++|+
T Consensus 6 ~~~l~~~~i~~v~~~~~D~~G~~r~k~ip~~~~~~-~-~~g~~~~gs~-~----~~~~~----~~~~~sD~~l~PD~~T~ 74 (421)
T 2j9i_A 6 LTMLNEHAAAFVRFEATDAAGASRSKSIPAQFFEK-V-IHARGYLEDG-E----VNAGA----AGAAASDIVLMPELSTA 74 (421)
T ss_dssp HHHHHHTTCSEEEEEEECSSSCEEEEEEEGGGCCT-T-HHHHCEEECG-G----GSTTT----CCTTCCCEEEEECSSCC
T ss_pred HHHHHhCCCCEEEEEEECCCCCEEEEEEEHHHHHH-h-hcCCeeeccc-C----ccccc----ccCCCCCEEEEEecCce
Confidence 45567779999999999999999999999999954 3 3567776642 0 11110 012 3799999999999
Q ss_pred eeccC-CCCcceEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCC--eeeeeeeeEEEEEeecccCCCCCcccCCCCCc
Q 005679 479 WRIPW-QKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPY 555 (683)
Q Consensus 479 ~~~pw-~~~~a~v~~d~~~~~g~p~~~cPR~~L~r~~~~~~~~~G~--~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~ 555 (683)
+++|| .+++++|+|| ||+|++.|||++|||++++++ +.|+ ++.+|+|+|||||++... +....+|
T Consensus 75 ~~~Pw~~~~~a~v~cd----dG~P~~~~pR~iLk~~~~~~~-~~G~~d~~~~g~E~EF~l~~~~~~-------~~~~p~y 142 (421)
T 2j9i_A 75 AVAAAAAAATAAVICD----GGAAAAASPRYIARAALAQLQ-AAGAAAGLLSAFIADFCIFGVPEV-------INSKTIS 142 (421)
T ss_dssp EECTTSSSSEEEEEEE----EESSCSCCHHHHHHHHHHHHH-HTTSCSEECCEECCCCEEESCCEE-------EECSSCE
T ss_pred EEcCcCCCCeEEEEcC----CCCCCCCChHHHHHHHHHHHH-hcCCccCceEEeeeEEEEEecCCC-------CCCCCCc
Confidence 99999 7889999999 799999999999999999998 6899 999999999999986211 0012246
Q ss_pred ccCCcccchHHHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcCh-HHHHHHHHHHHHHHHHHHHHHcCCeEEeeec-
Q 005679 556 CSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLATFVPN- 633 (683)
Q Consensus 556 ~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~-~l~aaD~~~~~k~~ik~vA~~~G~~ATFmpK- 633 (683)
|+..+.+...+++++|++.|+ +||+||+.|+|+|||||||++.|.+ ++++||+++++|++||+||++||+.||||||
T Consensus 143 ~~~~~~~~~~~~~~~i~~~l~-~Gi~ve~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~atFmpKP 221 (421)
T 2j9i_A 143 FPASTTAAAADQPQEAAAGGA-AGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASAAAAA 221 (421)
T ss_dssp EEECCCTTCTTGGGSCCTTCC-CSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEECCTTS
T ss_pred CCCCcccchhHHHHHHHHHHh-CCCCeEEeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEcCCc
Confidence 666666777889999999999 9999999999999999999999999 9999999999999999999999999999999
Q ss_pred -----------ccC---CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhcCCCCCCC
Q 005679 634 -----------LWQ---NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL 683 (683)
Q Consensus 634 -----------l~~---~g~N~f~~~~~~~~~~lS~~~~~fiaGiL~h~~al~a~~~Pt~NSY~ 683 (683)
+|+ +|+|+|.+ ++++ +||+++++||||||+|+|++++|++||+|||+
T Consensus 222 ~~~GSG~~h~Sl~~~~~~G~nlf~~--~~~~-~ls~~~~~~iaGil~h~~~l~a~~~p~~NSYk 282 (421)
T 2j9i_A 222 AAAAAGAGSHSIWDVGAAGTNAFAG--ASGA-RATLTGAKWLAGLLAAAAAAAAAAAAAAAAAA 282 (421)
T ss_dssp STTSCCCBCCEEECEEETTEESSCS--SSGG-GCCHHHHHHHHHHHHHHHHHHHHHTCSHHHHH
T ss_pred CCCCCceEEEeccccCCCCceeecC--CCCc-cccHHHHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 555 58899984 3333 79999999999999999999999999999995
No 11
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=100.00 E-value=1.7e-49 Score=428.82 Aligned_cols=268 Identities=18% Similarity=0.246 Sum_probs=215.0
Q ss_pred hhhhhhcc-CCceEEEEEEecCCC-CceeEEEechhhhHHHhhc--CccccccccccccccCCCCCCCCCCCCccEEEEe
Q 005679 398 LKKSDAFE-SDVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMP 473 (683)
Q Consensus 398 ~~~~~~~~-~~i~~V~~~~~D~~G-~~R~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~l~P 473 (683)
+..++..+ .++.+|+++|+|++| ++|+|.||+++|.+.+ +. |+++++++.++. ..+.+|++|+|
T Consensus 33 l~~~l~~~~~~~~~v~~~~~D~~G~~~R~K~ip~~~~~~~~-~~~p~~~~dgss~~~~-----------~~~~sD~~l~P 100 (384)
T 2ojw_A 33 KQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCV-EELPEWNFDGSSTLQS-----------EGSNSDMYLVP 100 (384)
T ss_dssp HHHHHTSCCCSCEEEEEEEECTTSSCEEEEEEEESSCCSSG-GGSCCEEEEGGGTTSS-----------BTTBCEEEEEE
T ss_pred HHHHHhCCCCCcEEEEEEEECCCCCeeeEEEEEHHHhhhhH-hhCccccccCcccccc-----------cCCCCcEEEEe
Confidence 33444444 469999999999999 9999999999998754 44 666766554321 13568999999
Q ss_pred ecCCceeccCCC-CcceEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCCeeeeeeeeEEEEEeecccC-CCC-CcccC
Q 005679 474 DLSTRWRIPWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE-GKE-EWVPI 550 (683)
Q Consensus 474 D~~Tl~~~pw~~-~~a~v~~d~~~~~g~p~~~cPR~~L~r~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~-~~~-~~~p~ 550 (683)
| |++++||.+ ++++|+||++++||+|++.|||++|||++++++ |+++.+|+|+|||||+..... +.. ...|.
T Consensus 101 D--t~~~~Pw~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~~~~g~p~ 175 (384)
T 2ojw_A 101 A--AMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVS---NQHPWFGMEQEYTLMGTDGHPFGWPSNGFPG 175 (384)
T ss_dssp E--EEEECTTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEEC-CCSBTTCCTTSCCS
T ss_pred e--EEEECCCCCCCeEEEEEEEECCCCCCCCcCHHHHHHHHHHHHh---CCEEEEEeeeEEEEEccCCCcccccCCCccC
Confidence 9 899999987 589999999999999999999999999999985 799999999999999863211 111 11355
Q ss_pred CCCCcccCCccc--chHHHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHcCCeE
Q 005679 551 DFTPYCSTAAYD--AVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLA 628 (683)
Q Consensus 551 ~~~~~~~~~~~~--~~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~k~~ik~vA~~~G~~A 628 (683)
++++||...+.+ ..++++++|+++|+++||+||++|+|+|||||||++.|+++|++||+++++|++||+||++||+.|
T Consensus 176 ~~g~y~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~Gl~a 255 (384)
T 2ojw_A 176 PQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIA 255 (384)
T ss_dssp CSSSCTTCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCCCCcccccchHHHHHHHHHHHHHHHHCCCCeEeeecCCCCcceEEEcCCCcHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 677888766555 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecccC---CCC--cccccCCC-CCCCCCcHHHHHHHHHH-HHHHHHhHhh-hcCCCCCCC
Q 005679 629 TFVPNLWQ---NGE--NVFMASDS-SSKHGMSSVGEKFMAGV-LHHLSSILAF-TAPVPNRLL 683 (683)
Q Consensus 629 TFmpKl~~---~g~--N~f~~~~~-~~~~~lS~~~~~fiaGi-L~h~~al~a~-~~Pt~NSY~ 683 (683)
|||||+.. +|+ +++.+..+ .+..+ +...+++++|+ ++|+++|++| .+|++|||+
T Consensus 256 TFmpKP~~~d~~GSG~H~H~Sl~~~~~~~g-~n~f~~~~~gl~~~h~~~i~a~~p~~~~nsyk 317 (384)
T 2ojw_A 256 TFDPKPIPGNWNGAGCHTNFSTKAMREENG-LKYIEEAIEKLSKRHQYHIRAYDPKGGLDNAR 317 (384)
T ss_dssp ECCSCSSCSSSCCCBEEEEEECHHHHSTTT-HHHHHHHHHHHHTCHHHHHHHSSTTTTTTGGG
T ss_pred EEeccccCCCCCCCeeeEEeehhhhcCCCc-hhHHHHHHHHHHHHHHHHheEeccCCCCCchh
Confidence 99999662 343 44443210 01112 34567899999 8999999999 444599995
No 12
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-49 Score=425.74 Aligned_cols=261 Identities=16% Similarity=0.240 Sum_probs=210.3
Q ss_pred hccCCceEEEEEEecCCCCceeEEEechhhhHHHhh-cCccccccccccccccCCCCCCCCCCCCccEEEEeecCCceec
Q 005679 403 AFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTK-YGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (683)
Q Consensus 403 ~~~~~i~~V~~~~~D~~G~~R~k~vp~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~l~PD~~Tl~~~ 481 (683)
+++.+|++|++.|+|.+|++|+|.+|+++|.+.+.+ .+++|++++.++. . .+.+|++|+|| |++++
T Consensus 18 l~~~~i~~v~~~~~D~~G~lR~K~~~~~~~~~~~~~~~~~~fDGss~g~~-------~----~~~sD~~l~Pd--t~~~~ 84 (370)
T 3fky_A 18 LDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQA-------P----GHDSDIYLKPV--AYYPD 84 (370)
T ss_dssp ---CCCEEEEEEEECSSSCEEEEEEEESSCCCSGGGSCCEEECGGGTTSS-------C----CCC--EEEEEE--EEEEC
T ss_pred cccCCeEEEEEEEEcCCCCeEEEEEECccccchHHhCCccccCCcccccc-------c----CCCCCeeEeee--EEEEc
Confidence 456899999999999999999999999988765422 2666777665321 1 25689999999 89999
Q ss_pred cCCCC-cceEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCCeeeeeeeeEEEEEeeccc-CC-CCCcccCCCCCcccC
Q 005679 482 PWQKQ-EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLR-EG-KEEWVPIDFTPYCST 558 (683)
Q Consensus 482 pw~~~-~a~v~~d~~~~~g~p~~~cPR~~L~r~~~~~~~~~G~~~~~g~E~EF~l~~~~~~-~~-~~~~~p~~~~~~~~~ 558 (683)
||.++ +++|+||++++||+|++.|||++|||++++++ |+++.+|+|+|||||+.... .+ +.+..|.++++||+.
T Consensus 85 Pw~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~p~~~~p~~~g~yy~~ 161 (370)
T 3fky_A 85 PFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK---DEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCG 161 (370)
T ss_dssp TTTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEECTTSSBTTCCTTSBCSCSSSCTTC
T ss_pred CCCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhc---CCCceEEeeeEEEEEccCCCcccCCCCCccCCCCccccc
Confidence 99986 89999999999999999999999999999874 89999999999999986311 11 111246677788765
Q ss_pred Ccccc--hHHHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHcCCeEEeeecccC
Q 005679 559 AAYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQ 636 (683)
Q Consensus 559 ~~~~~--~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~k~~ik~vA~~~G~~ATFmpKl~~ 636 (683)
.+... .++++++++++|+++||+||++|+|+|||||||++.|+++|++||+++++|++||+||++||+.||||||+..
T Consensus 162 ~~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~~vk~vA~~~G~~ATFmpKP~~ 241 (370)
T 3fky_A 162 VGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLK 241 (370)
T ss_dssp CSTTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHTTTCEEECCSCSSS
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCcEEEEcccccC
Confidence 54333 5899999999999999999999999999999999999999999999999999999999999999999999653
Q ss_pred ---CCC--cccccCCC-CCCCCCcHHHHHHHHHHH-HHHHHhHhhhcCCCCCCC
Q 005679 637 ---NGE--NVFMASDS-SSKHGMSSVGEKFMAGVL-HHLSSILAFTAPVPNRLL 683 (683)
Q Consensus 637 ---~g~--N~f~~~~~-~~~~~lS~~~~~fiaGiL-~h~~al~a~~~Pt~NSY~ 683 (683)
+|+ +++.+.-. .+..+++ ..++||+||+ +|+++|++|+ +|||+
T Consensus 242 gd~~GSG~H~H~Sl~~~~~~~g~~-~~~~~i~gl~~~h~~~i~a~~---~nSYk 291 (370)
T 3fky_A 242 GDWNGAGCHANVSTKEMRQPGGTK-YIEQAIEKLSKRHAEHIKLYG---SDNDM 291 (370)
T ss_dssp SSSCCCBEEEEEECHHHHSSSTHH-HHHHHHHHHHHTHHHHHHSSC---TTGGG
T ss_pred CCCCcccceeeeccccccCCCCHH-HHHHHHHHHHHHhHHHHHHHc---cchhh
Confidence 343 44443210 1123444 4599999999 9999999996 79996
No 13
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00 E-value=2.2e-47 Score=408.86 Aligned_cols=260 Identities=19% Similarity=0.248 Sum_probs=210.2
Q ss_pred ccCCceEEEEEEecCCC-CceeEEEechhhhHHHhhc--CccccccccccccccCCCCCCCCCCCCccEEEEeecCCcee
Q 005679 404 FESDVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWR 480 (683)
Q Consensus 404 ~~~~i~~V~~~~~D~~G-~~R~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~l~PD~~Tl~~ 480 (683)
...++.+|+++|+|+.| .+|+|.+|++.+.+.+ +. |++|++++.++. . ...+|++|+|| |+++
T Consensus 14 ~~~~~~~v~~~~vD~~g~~~r~k~~~~~~~~~~~-~~~~g~~fdgss~~~~-------~----~~~sD~~l~PD--t~~~ 79 (356)
T 2d3a_A 14 DTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDP-SKLPKWNYDGSSTGQA-------P----GEDSEVILYPQ--AIFK 79 (356)
T ss_dssp GTCSCEEEEEEEECTTSSCEEEEEEEESSCCCCG-GGSCCEEEEGGGTTSS-------C----SSSCEEEEEEE--EEEE
T ss_pred CCCCeEEEEEEEEcCCCCcccceEEECCcchhhH-hhcCcceecccccccc-------c----CcCCcEEEEEE--EEEE
Confidence 45678999999999999 9999999998887654 44 888888765421 1 13679999999 8999
Q ss_pred ccCCC-CcceEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCCeeeeeeeeEEEEEeecccCCCCCc----ccCCCCCc
Q 005679 481 IPWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEW----VPIDFTPY 555 (683)
Q Consensus 481 ~pw~~-~~a~v~~d~~~~~g~p~~~cPR~~L~r~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~----~p~~~~~~ 555 (683)
+||.+ ++++|+||++++||+|++.|||++|||++++++ +.|+++.+|+|+|||||++.. +....| .|.++++|
T Consensus 80 ~P~~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~-~~g~~~~~G~E~EF~lf~~~~-~~~~~~~~~g~p~~~g~y 157 (356)
T 2d3a_A 80 DPFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPE-VAAEEPWYGIEQEYTLLQKDT-NWPLGWPIGGFPGPQGPY 157 (356)
T ss_dssp CTTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHSHH-HHHHCCEEEEEEEEEEEETTT-CCBTTSCTTSBCSCSSSC
T ss_pred CCcCCCCceEEEEEEECCCCCCCCCCHHHHHHHHHHHHH-hcCCeeEEecceEEEEEecCC-CcccccccCCCCCCCCCc
Confidence 99987 589999999999999999999999999999998 579999999999999998631 111111 35567788
Q ss_pred ccCCcccc--hHHHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHcCCeEEeeec
Q 005679 556 CSTAAYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN 633 (683)
Q Consensus 556 ~~~~~~~~--~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~k~~ik~vA~~~G~~ATFmpK 633 (683)
|...+.+. ..+++++++++|+++||+||++|+|+|||||||++.|++++++||+++++|++||+||++||+.||||||
T Consensus 158 ~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpK 237 (356)
T 2d3a_A 158 YCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPK 237 (356)
T ss_dssp TTCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSC
T ss_pred CcCcccchHHHHHHHHHHHHHHHHCCCCEEEeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEECCC
Confidence 87766654 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC---CCC--cccccCCC-CCCCCCcHHHHHHH-HHHHHHHHHhHhhhcCCCCCCC
Q 005679 634 LWQ---NGE--NVFMASDS-SSKHGMSSVGEKFM-AGVLHHLSSILAFTAPVPNRLL 683 (683)
Q Consensus 634 l~~---~g~--N~f~~~~~-~~~~~lS~~~~~fi-aGiL~h~~al~a~~~Pt~NSY~ 683 (683)
+.. +|+ +++.+..+ .+..+. .....++ +++++|++++++| ++|||+
T Consensus 238 P~~~d~~GSG~H~H~Sl~~~~~~~g~-~~f~~~~~~l~l~h~~~l~a~---~~nSYk 290 (356)
T 2d3a_A 238 PIPGDWNGAGAHTNYSTESMRKEGGY-EVIKAAIEKLKLRHKEHIAAY---GEGNER 290 (356)
T ss_dssp SSCSSSCCCBEEEEEECTTTSSTTHH-HHHHHHHHHHHHTHHHHHTTS---CTTHHH
T ss_pred ccCCCCCCCcceEEechhhhccCCCH-HHHHHHHHHHHHHHHHHHHhH---ccChHH
Confidence 662 343 45554211 111121 2222333 3479999999999 358985
No 14
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A*
Probab=100.00 E-value=5.2e-38 Score=336.56 Aligned_cols=337 Identities=15% Similarity=0.110 Sum_probs=245.2
Q ss_pred HHHHHHhccCCcccccCCCcccCCC-CcchhhccccccCC------CC--CCCC-----------------cc-hhHHHH
Q 005679 4 EELREVVENIELVDGHAHNIVSLDS-SFPFIQSFSEATGP------AL--SYAP-----------------YS-LSFKRN 56 (683)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~~-~~~~~~~~~ea~~~------~~--~~~~-----------------~~-l~~~~~ 56 (683)
.+|++.++++||||-|||-.-..-. +. |.. ++|-.++ ++ ...+ +. .-+.|+
T Consensus 13 ~~Ly~~a~~~PIiDyH~HL~P~~iae~~-f~n-i~elwgdHYkw~r~mRa~Gv~e~~~iT~s~~ekA~~vgnplflyhW~ 90 (437)
T 2qee_A 13 EKVKNAVNNQPVTDMHTHLFSPNFGEIL-LWD-IDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLIWEELFIKRSP 90 (437)
T ss_dssp HHHHHHHHHSCEEECSCSCCCGGGCTTS-BCS-HHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHhcCCeeccccCCCHHHHHhcc-cCC-HHhccccHHHHHHHHHHcCCCHHHhcCCCHHHHHHHhCCCcceeech
Confidence 3678888999999999997654310 01 211 1111110 00 0111 11 123467
Q ss_pred HHH--------HHHHhCCCC---CHHHHHHHHHH-cChhhHHHHHHhhCCcEEEEEecCCCCCCCCChH---HHhh-hc-
Q 005679 57 LKN--------IAELYGCDS---SLQAVEEYRRA-AGLQSICSICFEAANISAVLIDDGLKLDKKHGLD---WHKS-LV- 119 (683)
Q Consensus 57 ~~~--------l~~~fg~~~---~~~~i~~~~~~-l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~---~h~~-~~- 119 (683)
|+| |++ ||++. |+++ |+++|+ +..+.++|.||+++||+++|| ||||+|+++ ||++ +.
T Consensus 91 hlEa~~~~~t~L~r-FGid~~~~ta~~-~~~~n~~l~~~~~~r~ll~~~nV~~v~T----TdDP~D~Le~~~~h~~~f~~ 164 (437)
T 2qee_A 91 VSEACRGVLTCLQG-LGLDPATRDLQV-YREYFAKKTSEEQVDTVLQLANVSDVVM----TNDPFDDNERISWLEGKQPD 164 (437)
T ss_dssp CSHHHHHHHHHHHH-TTCCGGGCCHHH-HHHHHHTCCHHHHHHHHHHHTTEEEEEC----CBCTTSHHHHHHHHTTCCCC
T ss_pred hhhcccchhHHHHH-cCCCCCccCHHH-HHHHHHHhCcccHHHHHHHHcCCeEEEe----CCCCCCchhhhHHHhhcCCC
Confidence 888 999 99996 9999 999999 554444999999999999999 899999999 9998 44
Q ss_pred CCCCeEEecchHH---HHHHHhhCC-CCCc------ccHHHHHHHHHHHHHhhcccceeeeeeecc--ccCCCC-CCCCC
Q 005679 120 PFVGRILRIERLA---EEILDQASP-DGSI------WTLDVFIETFLKQLRSAANKIVGLKSIAAY--RSGLEI-NPHVT 186 (683)
Q Consensus 120 ~~~~~i~rie~~~---~~~~~~~~~-~~~~------~~~~~~~~al~~~l~~~~~~~vgfksi~~y--~~gl~~-~~~~~ 186 (683)
.++-..+|++++. .+++++|.+ +.+| .+|+++++||++|.+ +.||. +|||+. ..+++
T Consensus 165 ~rv~Pa~RpD~~l~~f~~~v~~L~~sg~~i~~~~~~~t~~~~~~AL~~rF~----------~~Gc~~sDh~l~~~~~~~~ 234 (437)
T 2qee_A 165 SRFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWIE----------RMDPVYMAVSLPPTFSFPE 234 (437)
T ss_dssp TTEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHHH----------HHCCSCEEEEECTTCCSSC
T ss_pred ceEeecCCchHHHhhHHHHHHHHHhcCCCcccCcccCCHHHHHHHHHHHHH----------HhCCEEEEecCCcCcCCCC
Confidence 2333455666544 266666644 3356 789999999999843 33444 588764 33222
Q ss_pred HHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCCC-CC------CCC-CCCCCccchHHHHhhc
Q 005679 187 KKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFG-DK------DLD-LRLSNPLHLRAILEDK 258 (683)
Q Consensus 187 ~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~l~e~a~e~glpvq~H~G~G-d~------~~~-~~~~~p~~L~~l~~~~ 258 (683)
..+ ..+|..+.+.++|+|+|||||+|+|+- +. |.| +...++..|..++.
T Consensus 235 ~~~---------------------~~~~~~~~l~~~~~e~gwvmQlHiGa~Rn~n~~~~~g~D~i~~~~~~~L~~ll~-- 291 (437)
T 2qee_A 235 ESN---------------------RGRIIRDCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLR-- 291 (437)
T ss_dssp SSH---------------------HHHHHHHTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHH--
T ss_pred CCH---------------------HHHHHHHHHHHHHHhCCCeEEEecCcccCCCHHhccCCCCCCccCHHHHHHHHH--
Confidence 111 134555558899999999999999983 11 222 12233456788888
Q ss_pred CCCCceEEEecCCCCcHHHHHHHHhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEE-EecCCCCCccchhhhH
Q 005679 259 RFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYASPETYFLGA 337 (683)
Q Consensus 259 ~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~~Pe~~~~~~ 337 (683)
+||+.+|-..+..-...++++.++++|||||++.+|||++. +.||+++++.++++.+ .+++ |.||+|+|.+ +++++
T Consensus 292 ~~~~~~lpktiLn~~~n~elat~ag~Fpnvq~g~~WWF~d~-p~gm~~q~~~~l~lL~-~~fvGmlTDsRsfls-yi~Rh 368 (437)
T 2qee_A 292 EYPNNKFLVTMLSRENQHELVVLARKFSNLMIFGCWWFMNN-PEIINEMTRMRMEMLG-TSFIPQHSDARVLEQ-LIYKW 368 (437)
T ss_dssp HCTTSCEEEEESCGGGHHHHHHHHHHCTTEEEBCCCGGGCS-HHHHHHHHHHHHHHHT-TCSBCCCCCCSBTTH-HHHHH
T ss_pred hCcccCCCeeecChhhHHHHHHHHccCCcceecCcccccCC-HHHHHHHHHHHHHHhC-cCcccCccchhHHhc-cchHH
Confidence 79988887777665678899999999999999999999865 8899999999988888 6666 9999999986 33799
Q ss_pred HHHHHHHHHHHHhh----hhcCCCChhH--HHHHHHHHHHHHHHHHhcCCCCcc
Q 005679 338 KRAREVVFSVLRDT----CIDEDLSVGE--AIEVAKDIFALNAAQFYKINLGVK 385 (683)
Q Consensus 338 ~~~r~~l~~~l~~~----v~~g~l~~~e--a~~~~~~I~~~NA~rly~l~~~~~ 385 (683)
++|||+||++|++| |++|+++ ++ .++++++|||+||+++|++..-+.
T Consensus 369 eyfRRilc~~Lg~~~~~lve~G~~p-d~~~l~~~v~~I~y~Na~~yf~~~~~~~ 421 (437)
T 2qee_A 369 HHSKSIIAEVLIDKYDDILQAGWEV-TEEEIKRDVADLFSRNFWRFVGRNDHVT 421 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHTHHHHHHHTCC----
T ss_pred HHHHHHHHHHHHHHHHhhhhCCCCC-CHHHHHHHHHHHHHHHHHHHhcccccee
Confidence 99999999999999 9999999 55 479999999999999999987654
No 15
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=100.00 E-value=4.6e-39 Score=361.05 Aligned_cols=210 Identities=20% Similarity=0.222 Sum_probs=167.8
Q ss_pred CccEEEEeecCC-ceeccCCCCcceEEEEeecCCCC------cCCCChHHHHHHHHHHHHHhcCC-----eeeeeeeeEE
Q 005679 466 TGEIRLMPDLST-RWRIPWQKQEEMIMADMHLKPGE------PWEYCPREALRKVSRLLKEEFNL-----VLNAGFEIEF 533 (683)
Q Consensus 466 ~gd~~l~PD~~T-l~~~pw~~~~a~v~~d~~~~~g~------p~~~cPR~~L~r~~~~~~~~~G~-----~~~~g~E~EF 533 (683)
..++++.||++| ..+.| ++-.|+|.+++-+|+ |+..|||++||++++.++ .+|. ++.+|+|+||
T Consensus 143 earg~~~~D~ts~afi~~---~TL~IP~~f~s~~Ge~ld~ktPL~rsPR~ilk~A~~~Lk-~~G~d~~~v~~~~G~E~EF 218 (729)
T 3o6x_A 143 EARGYTAWDGSSPAFVVD---TTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQ-LFDKNITRVFTNLGWEQEY 218 (729)
T ss_dssp -----CCBCSSSCCEEET---TEEECCBCCC----CCCBSHHHHHHHHHHHHHHHHHHHH-TSSSCCCCEEEEEEEEECE
T ss_pred hccCceecCCCCCeEEeC---CeEEEEEEEEeCCCCcCCCCCchhhCHHHHHHHHHHHHH-HcCCCCccceEEEEeccEE
Confidence 358899999999 55665 688888888886664 688999999999999998 6898 6999999999
Q ss_pred EEEeecccC--------CCC--CcccCCCC-----CcccCCcccchHHHHHHHHHHHHhCCCceeEeeccCCCCceEEec
Q 005679 534 YLLKSVLRE--------GKE--EWVPIDFT-----PYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIAL 598 (683)
Q Consensus 534 ~l~~~~~~~--------~~~--~~~p~~~~-----~~~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l 598 (683)
|||++.... |+. +..|. ++ +||...+ +...+++++|++.|+++||+||+.|+|+|||||||++
T Consensus 219 FLfd~~~~~~r~dl~~tGrtl~G~~P~-kgq~l~d~Yf~~~p-d~~~~~~~di~~~L~~~GI~ve~~H~EvaPGQ~EI~~ 296 (729)
T 3o6x_A 219 FLVDTSLYNARPDLRLTGRTLMGHSSA-KDQQLEDHYFGSIP-PRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAP 296 (729)
T ss_dssp EEEEHHHHHSCTTHHHHSSCSCCCC---------------CC-HHHHHHHHHHHHHHHHHTCCEEEECBCSSTTEECCEE
T ss_pred EEEecchhccCcccccccccccCCCCC-CCCCCCCccCCCCc-hhHHHHHHHHHHHHHHCCCCeEEeecCCCCCceEecc
Confidence 999974211 111 12232 23 7887666 7789999999999999999999999999999999999
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHHHcCCeEEeeec---------------ccCC-CCcccccCCCCCCC---CCcHHHHH
Q 005679 599 GHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN---------------LWQN-GENVFMASDSSSKH---GMSSVGEK 659 (683)
Q Consensus 599 ~~~~~l~aaD~~~~~k~~ik~vA~~~G~~ATFmpK---------------l~~~-g~N~f~~~~~~~~~---~lS~~~~~ 659 (683)
.|.++++|||+++++|++||+||++||+.|||||| ||++ |+|+|.+.+ ++. ++|..+++
T Consensus 297 ~~~~al~AAD~~~l~K~vvK~VA~~hGl~ATFMPKP~~g~nGSG~HvH~SL~~~~G~NLF~~~d--~~~~~~~~s~~~~~ 374 (729)
T 3o6x_A 297 IFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGK--NPKGNMLFLTFLVN 374 (729)
T ss_dssp CCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECSSCSSTTSCCCBEEEEEEEEETTCCCSSCCCS--STTTCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCCCCcceeeccccCCCCCcCCCCCC--CccchhhHHHHHHH
Confidence 99999999999999999999999999999999999 6765 899997432 233 46889999
Q ss_pred HHHHHHHHHHHhHhhhcCCCCCCC
Q 005679 660 FMAGVLHHLSSILAFTAPVPNRLL 683 (683)
Q Consensus 660 fiaGiL~h~~al~a~~~Pt~NSY~ 683 (683)
||||||+|+|+|+||++|++|||+
T Consensus 375 fIaGVLkHa~aL~A~~aPt~NSYR 398 (729)
T 3o6x_A 375 VLMMVHKNQDLLRASIMSAGNSHR 398 (729)
T ss_dssp HHHHHHHTHHHHHHHSCCHHHHTT
T ss_pred HHHHHHHhHHHHHHHhCCCccccc
Confidence 999999999999999999999994
No 16
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.69 E-value=2.8e-17 Score=172.17 Aligned_cols=149 Identities=18% Similarity=0.254 Sum_probs=112.8
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEe
Q 005679 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (683)
Q Consensus 211 l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~ 290 (683)
+++..+.++|+.|+++|+||++|+|... +.+..+++|..+..+++ +||+++||+.|+|+||..++..++..++|||+
T Consensus 135 ~~d~~~~~~~~~a~e~glpv~iH~~~~~-~~~~~~~~p~~~~~v~~--~~P~l~ivl~H~G~~~~~~~~~l~~~~~nvy~ 211 (291)
T 3irs_A 135 VDDRRLYPLYAFCEDNGIPVIMMTGGNA-GPDITYTNPEHIDRVLG--DFPDLTVVSSHGNWPWVQEIIHVAFRRPNLYL 211 (291)
T ss_dssp TTCGGGHHHHHHHHHTTCCEEEECSSSC-SSSGGGGCHHHHHHHHH--HCTTCCEEEEGGGTTCHHHHHHHHHHCTTEEE
T ss_pred CCCHHHHHHHHHHHHcCCeEEEeCCCCC-CCCCccCCHHHHHHHHH--HCCCCEEEeecCCcccHHHHHHHHhHCCCeEe
Confidence 3455678899999999999999998641 22345677888999999 79999999999999999999999889999999
Q ss_pred ccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHH
Q 005679 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIF 370 (683)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~ 370 (683)
|+|+++... + +.. .+.++++..|.+||||||| +|... ... .+ +.+. + +.+++ +.+++|+
T Consensus 212 ~~Sg~~~~~-~-~~~-~~~~~~~~~g~drllfgSD---~P~~~--~~~----~~-~~~~----~--l~l~~--e~~~~i~ 270 (291)
T 3irs_A 212 SPDMYLYNL-P-GHA-DFIQAANSFLADRMLFGTA---YPMCP--LKE----YT-EWFL----T--LPIKP--DAMEKIL 270 (291)
T ss_dssp ECGGGGSSS-T-THH-HHHHHHTTGGGGTBCCCCC---BTSSC--HHH----HH-HHHH----T--SSCCH--HHHHHHH
T ss_pred cHHHHhccC-C-CHH-HHHHHHHHhCcceEEEecC---CCCCC--HHH----HH-HHHH----H--CCCCH--HHHHHHH
Confidence 999986422 1 222 3556788889999999999 66321 111 11 1122 1 23444 7799999
Q ss_pred HHHHHHHhcCCCC
Q 005679 371 ALNAAQFYKINLG 383 (683)
Q Consensus 371 ~~NA~rly~l~~~ 383 (683)
++||+|||+++..
T Consensus 271 ~~NA~rl~~~~~~ 283 (291)
T 3irs_A 271 HGNAERLLAQAGR 283 (291)
T ss_dssp THHHHHHHHHSCC
T ss_pred HHHHHHHhCcccc
Confidence 9999999998654
No 17
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=99.61 E-value=1.9e-15 Score=159.73 Aligned_cols=172 Identities=20% Similarity=0.255 Sum_probs=111.3
Q ss_pred CHHHHHHHHHHHHhc-C-CCCc----cCchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCC--CC----Cc-----
Q 005679 186 TKKDAEEGLAEDLRS-G-KPVR----ITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR--LS----NP----- 248 (683)
Q Consensus 186 ~~~ea~~~~~~~l~~-~-~~~~----~~~~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~--~~----~p----- 248 (683)
+.+++.+.++++... + .+.+ .....+.+..+.|+|+.|+++|+||++|+|.+....+.. .. .+
T Consensus 108 ~~~~a~~el~r~~~~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~g~~~~~p~~~~~~~~~~~~~~~~~~ 187 (312)
T 3ij6_A 108 NIESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYELSQAMLQ 187 (312)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEECCCCTTSSSCCTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcCCCCCCCCCcccccccHHHHHHHHHH
Confidence 345555566666542 1 1222 233567788899999999999999999998642111100 00 01
Q ss_pred cchHHHHhhcCCCCceEEEecCC--CCcHHHHHH------HHhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcE
Q 005679 249 LHLRAILEDKRFSKCRFVLLHAS--YPFSKEASY------LAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKV 320 (683)
Q Consensus 249 ~~L~~l~~~~~~P~l~~vl~H~g--~p~~~e~~~------la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~ki 320 (683)
+.+..+++ |||++|||+.|+| .||..+... .+..++|||+|+|..+. ...++.+++..|.+||
T Consensus 188 li~~gv~~--rfP~Lkii~~H~Gg~~P~~~~r~~~~~~~~~~~~~~nvy~dts~~~~-------~~~l~~~~~~~g~dri 258 (312)
T 3ij6_A 188 LVQSDLFQ--DYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDFKKFYVDTAILGN-------TPALQLAIDYYGIDHV 258 (312)
T ss_dssp HHHTTHHH--HCTTCCEEESGGGTTTTTSHHHHHHHSCHHHHHHGGGCEEECCSSSC-------HHHHHHHHHHHCGGGE
T ss_pred HHHcChHh--hCCCCeEEecCCcccHHHHHHHHHHhcccchHHHcCeEEEeCCCCCC-------HHHHHHHHHhCCCCeE
Confidence 12357777 8999999999998 577654332 34578999999997642 2357788888899999
Q ss_pred EEecCCCCCccchhh-h-HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005679 321 MFSTDAYASPETYFL-G-AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 321 lfgSD~~~~Pe~~~~-~-~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
||||| ||...++ + .+...+. +++ +.+++ +.+++|+++||+|+|+-+
T Consensus 259 lfgSD---~P~~~~p~~~~~~~~~~--------l~~--l~l~~--~~~~~i~~~NA~rl~~~~ 306 (312)
T 3ij6_A 259 LFGTD---APFAVMPSGADQIITQA--------IND--LTISD--KDKQKIFHDNYYSLIKEG 306 (312)
T ss_dssp ECCCC---BTSSSTTTCSHHHHHHH--------HHT--SSSCH--HHHHHHHTHHHHHHHCC-
T ss_pred EEeCC---CCCCcCCCcchHHHHHH--------HHH--cCCCH--HHHHHHHHHHHHHHHhCc
Confidence 99999 5532111 1 1112222 222 23444 679999999999999853
No 18
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=99.60 E-value=2.8e-15 Score=157.73 Aligned_cols=151 Identities=17% Similarity=0.157 Sum_probs=105.5
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcH--------------
Q 005679 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFS-------------- 275 (683)
Q Consensus 210 ~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~-------------- 275 (683)
.+.+..+.+.++.|+++|+||++|++.. ++..+..+++ +||+++||+.|+|.|..
T Consensus 118 ~~~~~~~~~~~~~~~~~glpv~ih~~~~---------~l~~l~~ll~--~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~ 186 (303)
T 4do7_A 118 FVDDADFARGVAWLQANDYVYDVLVFER---------QLPDVQAFCA--RHDAHWLVLDHAGKPALAEFDRDDTALARWR 186 (303)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEECCCGG---------GHHHHHHHHH--HCCSSCEEEGGGGCCCGGGCC---CHHHHHH
T ss_pred cccCHHHHHHHHHHHHCCCeEEEecCHH---------HHHHHHHHHH--HCCCCCEEEeCCCCCCccccccccchHHHHH
Confidence 3556678889999999999999999732 3446778888 79999999999998752
Q ss_pred HHHHHHHhhCCeeEeccccccCCcc---------HHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh-HHHHHHHHH
Q 005679 276 KEASYLAYVYPQVYLDFGLAIPKLS---------VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG-AKRAREVVF 345 (683)
Q Consensus 276 ~e~~~la~~~pnVy~d~s~~~~~~~---------~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~-~~~~r~~l~ 345 (683)
..+..|+ .+||||+++|+++.... .......++.+++..|.+||||||| ||...... ...+.+.+
T Consensus 187 ~~l~~la-~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD---~P~~~~~~~~~~~~~~~- 261 (303)
T 4do7_A 187 AALRELA-ALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSD---WPVCLLAASYDEVASLV- 261 (303)
T ss_dssp HHHHHHH-TSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCC---BTGGGGTCCHHHHHHHH-
T ss_pred HHHHHHH-hCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCC---CCCCcCcCCHHHHHHHH-
Confidence 2345555 79999999998764321 1233457889999999999999999 66431111 11122222
Q ss_pred HHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCc
Q 005679 346 SVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (683)
Q Consensus 346 ~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~~~~ 384 (683)
.+|+.. .++ + +.+++|+++||+|+|+++.+.
T Consensus 262 ---~~~~~~-~l~--~--~~~~~i~~~Na~rl~~l~~~~ 292 (303)
T 4do7_A 262 ---ERWAES-RLS--A--AERSALWGGTAARCYALPEPA 292 (303)
T ss_dssp ---HHHHHH-HCC--H--HHHHHHTTHHHHHHTTCC---
T ss_pred ---HHHHhc-CCC--H--HHHHHHHHHHHHHHhCCCCcc
Confidence 221111 234 3 679999999999999997654
No 19
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=99.54 E-value=9.8e-15 Score=157.83 Aligned_cols=167 Identities=18% Similarity=0.225 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHhc-C-CCCcc----CchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCC-----CCCCC--------
Q 005679 187 KKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLD-----LRLSN-------- 247 (683)
Q Consensus 187 ~~ea~~~~~~~l~~-~-~~~~~----~~~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~-----~~~~~-------- 247 (683)
.+++.+.++++... + ++.++ ....+.+..++|+|+.|+++|+||++|+|.+..... .....
T Consensus 158 ~~~a~~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~g~~~~~~~~p~~~~~~~~~~~g~~~e 237 (373)
T 4inf_A 158 PEWSAREIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPATSPDSMIDPMLEAGLDGAIFGFGVE 237 (373)
T ss_dssp HHHHHHHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECCCCCCTTTCHHHHHHTCSSTTTHHHHH
T ss_pred HHHHHHHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECCCCCCccccccccccccchhhhhhHHH
Confidence 44455556666542 2 23322 234677888999999999999999999997532110 00000
Q ss_pred ------ccchHHHHhhcCCCCceEEEecCC--CCcHHHHHHHHh----------------------hCCeeEeccccccC
Q 005679 248 ------PLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYLAY----------------------VYPQVYLDFGLAIP 297 (683)
Q Consensus 248 ------p~~L~~l~~~~~~P~l~~vl~H~g--~p~~~e~~~la~----------------------~~pnVy~d~s~~~~ 297 (683)
.+.+..+++ +||++|||+.|+| .||..+....+. ..+|||+|+|.++.
T Consensus 238 t~~~~~~Li~~gv~~--rfP~LkiilaH~Gg~~P~~l~Rld~~~~~~~~~~~~~~~~~l~~~pse~~~~nvy~d~sg~~~ 315 (373)
T 4inf_A 238 TGMHLLRLITIGIFD--KYPSLQIMVGHMGEALPYWLYRLDYMHQAGVRSQRYERMKPLKKTIEGYLKSNVLVTNSGVAW 315 (373)
T ss_dssp HHHHHHHHHHHTHHH--HCTTCCEEECHHHHTTTTTHHHHHHHHHHHHHHTCCTTCCCCSSCHHHHHHHTEEEECTTCCC
T ss_pred HHHHHHHHHHcCchh--hCcCCeEEEecccchHHHHHHHHHHHHhhccccccccccccccCCHHHHHhcCeEEeeccccc
Confidence 112456777 8999999999997 677533221110 02699999998752
Q ss_pred CccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHH
Q 005679 298 KLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (683)
Q Consensus 298 ~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rl 377 (683)
...++.+++..|.+||||||| ||.. .... .. +.++.-.+ ++ +.+++|+++||+||
T Consensus 316 -------~~~l~~~~~~~g~drilfgSD---~P~~--~~~~-~~--------~~l~~~~l--~~--e~~~~I~~~NA~rl 370 (373)
T 4inf_A 316 -------EPAIKFCQQVMGEDRVMYAMD---YPYQ--YVAD-EV--------RAMDAMDM--SA--QTKKKFFQTNAEKW 370 (373)
T ss_dssp -------HHHHHHHHHHHCGGGEECCCC---TTTT--CCHH-HH--------HHHHTCSC--CH--HHHHHHHTHHHHHH
T ss_pred -------HHHHHHHHHHcCcceEEEecC---CCCC--ccHH-HH--------HHHHhCCC--CH--HHHHHHHhHHHHHH
Confidence 236778888899999999999 6632 2221 11 12222234 44 67999999999999
Q ss_pred hcC
Q 005679 378 YKI 380 (683)
Q Consensus 378 y~l 380 (683)
|+|
T Consensus 371 f~L 373 (373)
T 4inf_A 371 FKL 373 (373)
T ss_dssp TTC
T ss_pred hCc
Confidence 986
No 20
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=99.53 E-value=1.7e-14 Score=148.97 Aligned_cols=138 Identities=20% Similarity=0.145 Sum_probs=103.5
Q ss_pred hhHHHHHHHHHHhhC-CCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEe
Q 005679 212 IDYIFISSLEVAQFL-DLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (683)
Q Consensus 212 ~d~~~~~l~e~a~e~-glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~ 290 (683)
.+..+.++++.|+++ |+||++|++.+. ....+..+..+++ +||+++||+.|+|.++..++..++..++|||+
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~~~-----~~~~~~~~~~~l~--~~p~l~iv~~H~G~~~~~~~~~~~~~~~~~y~ 200 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFNPL-----VLQDIKEIAELCK--AFPKVPVILGHMGGSNWMTAVELAKEIQNLYL 200 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCSTTC-----CHHHHHHHHHHHH--HSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEE
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCCCC-----ccccHHHHHHHHH--HCCCceEEEECCCCccHHHHHHHHHhCCCEEE
Confidence 567788999999999 999999998531 1123456778888 79999999999998877777788888999999
Q ss_pred ccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHH
Q 005679 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIF 370 (683)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~ 370 (683)
|+|+.+.. ..++++++..| +||||||| +|.. .....++.+. ...++ + +.+++|+
T Consensus 201 ~~s~~~~~-------~~~~~~~~~~~-dril~gSD---~P~~---~~~~~~~~~~--------~~~l~--~--~~~~~i~ 254 (272)
T 3cjp_A 201 DTSAYFST-------FVLKIVINELP-LKCIFGTD---MPFG---DLQLSIEAIK--------KMSND--S--YVANAVL 254 (272)
T ss_dssp ECTTCSCH-------HHHHHHHHHST-TTEECCCC---TTSS---CHHHHHHHHH--------HHCSS--H--HHHHHHH
T ss_pred EecccccH-------HHHHHHHHhCC-CeEEEeCC---CCCC---ChHHHHHHHH--------hcCCC--H--HHHHHHH
Confidence 99987532 35777888888 99999999 5532 1122233221 11344 4 6799999
Q ss_pred HHHHHHHhcCCC
Q 005679 371 ALNAAQFYKINL 382 (683)
Q Consensus 371 ~~NA~rly~l~~ 382 (683)
++||+|||+++.
T Consensus 255 ~~Na~rl~~l~~ 266 (272)
T 3cjp_A 255 GDNISRLLNIEG 266 (272)
T ss_dssp THHHHHHHTC--
T ss_pred HHHHHHHhCccC
Confidence 999999999964
No 21
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=99.52 E-value=1.7e-14 Score=151.79 Aligned_cols=149 Identities=13% Similarity=0.085 Sum_probs=106.1
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCC---------cHHHHH
Q 005679 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEAS 279 (683)
Q Consensus 209 ~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p---------~~~e~~ 279 (683)
..+.+..+.++++.|++ ||++++|++.. .+..+..+++ +| +++||+.|+|.| +.+++.
T Consensus 133 ~~~~~~~~~~~~~~l~~-gl~v~l~~~~~---------~l~~l~~~~~--~~-~~~iVidH~G~p~~~~g~~~~~~~~~~ 199 (303)
T 4d9a_A 133 DDAPKDKFLEVAGRLPA-GWHVVIYFEAD---------ILEELRPFMD--AI-PVPIVIDHMGRPDVRQGPDGADMKAFR 199 (303)
T ss_dssp SCCCHHHHHHHHTSCCT-TCEEEEECCGG---------GHHHHHHHHH--HC-SSCEEEGGGGCCCGGGCTTSHHHHHHH
T ss_pred cccCHHHHHHHHHHHhc-CCEEEEecccc---------cHHHHHHHHH--HC-CCcEEEeCCCCCCcccCCCCHHHHHHH
Confidence 34667778899999999 99999999742 2345777888 79 899999999964 457788
Q ss_pred HHHhhCCeeEeccccccCCc----cHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhH-HHHHHHHHHHHHhhhhc
Q 005679 280 YLAYVYPQVYLDFGLAIPKL----SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGA-KRAREVVFSVLRDTCID 354 (683)
Q Consensus 280 ~la~~~pnVy~d~s~~~~~~----~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~-~~~r~~l~~~l~~~v~~ 354 (683)
.++..+||||+++|++.... .......+++.+++.+ .+|+||||| ||.+..... ..+.+.+ +.+.++
T Consensus 200 ~l~~~~~NV~vKlSg~~~~~~~~~~~~~~~~~~~~~~~~~-~dRlmfGSD---wP~~~~~~~~~~~~~~~-~~~~~~--- 271 (303)
T 4d9a_A 200 RLLDSREDIWFKATCPDRLDPAGPPWDDFARSVAPLVADY-ADRVIWGTA---WPHPNMQDAIPDDGLVV-DMIPRI--- 271 (303)
T ss_dssp HHHHHCTTEEEECCCHHHHCTTCTTCHHHHHHHHHHHHHT-TTSEECCCC---TTCTTCTTSCCCHHHHH-HTHHHH---
T ss_pred HHHhhCCCEEEEeeCceecCCCCCCHHHHHHHHHHHHHhC-cccEEEecC---CCCcccccCCCCHHHHH-HHHHHH---
Confidence 89999999999999864211 1224566888899988 799999999 664322110 0111111 111221
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhcCCCC
Q 005679 355 EDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (683)
Q Consensus 355 g~l~~~ea~~~~~~I~~~NA~rly~l~~~ 383 (683)
++ ++ +.+++|+++||+|+|+++..
T Consensus 272 --~~-~~--~~~~~il~~NA~rly~~~~~ 295 (303)
T 4d9a_A 272 --AP-TP--ELQHKMLVTNPMRLYWSEEM 295 (303)
T ss_dssp --SC-SH--HHHHHHHTHHHHHHHCGGGC
T ss_pred --CC-CH--HHHHHHHHHHHHHHhCCCcc
Confidence 22 34 77999999999999998644
No 22
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=99.50 E-value=3.8e-14 Score=147.43 Aligned_cols=149 Identities=13% Similarity=0.067 Sum_probs=102.7
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCc---------HHHHHH
Q 005679 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF---------SKEASY 280 (683)
Q Consensus 210 ~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~---------~~e~~~ 280 (683)
.+.+..+.++++.|+++|+||.+|++.. .+..+..+++ +|| ++||+.|+|.++ .+++..
T Consensus 120 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~---------~~~~~~~~~~--~~p-l~~vi~H~g~~~~~~~~~~~~~~~~~~ 187 (288)
T 2ffi_A 120 DLTGAQWRPLLERIGEQGWHVELHRQVA---------DIPVLVRALQ--PYG-LDIVIDHFGRPDARRGLGQPGFAELLT 187 (288)
T ss_dssp CTTSTTTHHHHHHHHHHTCEEEECSCTT---------THHHHHHHHT--TTT-CCEEESGGGSCCTTSCTTCTTHHHHTT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEeechh---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCChhHHHHHH
Confidence 4556677889999999999999999843 2446778888 899 999999998776 344444
Q ss_pred HHhhCCeeEeccccccCCccH-----HHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcC
Q 005679 281 LAYVYPQVYLDFGLAIPKLSV-----QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDE 355 (683)
Q Consensus 281 la~~~pnVy~d~s~~~~~~~~-----~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g 355 (683)
+ ..+||||+++|+++..... ......++.+++..|.+|||||||++..............+. +.++
T Consensus 188 l-~~~~n~y~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~~~~----~~~~---- 258 (288)
T 2ffi_A 188 L-SGRGKVWVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDWPHTQHESEVSFGSAVEQ----FEAL---- 258 (288)
T ss_dssp C-CCCSCEEEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHHHHH----HHHH----
T ss_pred H-HhCCCEEEEeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCCCCCCCCCHHHHHHH----HHHH----
Confidence 4 3679999999987643211 122357889999999999999999432210000011111122 2222
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCCC
Q 005679 356 DLSVGEAIEVAKDIFALNAAQFYKINLG 383 (683)
Q Consensus 356 ~l~~~ea~~~~~~I~~~NA~rly~l~~~ 383 (683)
.++ + +.+++|+++||+|||+++.+
T Consensus 259 ~~~--~--~~~~~i~~~NA~rl~~l~~~ 282 (288)
T 2ffi_A 259 GCS--A--QLRQALLLDTARALFGFELE 282 (288)
T ss_dssp CCC--H--HHHHHHHTHHHHHHTTCCCC
T ss_pred CCC--H--HHHHHHHHHCHHHHhCcccc
Confidence 223 3 67999999999999999764
No 23
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=99.50 E-value=1.4e-14 Score=155.78 Aligned_cols=170 Identities=18% Similarity=0.197 Sum_probs=109.5
Q ss_pred CHHHHHHHHHHHHhc-C-CCCcc----CchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCC-----CCCCCC--------
Q 005679 186 TKKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKD-----LDLRLS-------- 246 (683)
Q Consensus 186 ~~~ea~~~~~~~l~~-~-~~~~~----~~~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~-----~~~~~~-------- 246 (683)
.++++.+.+++++.. + .+.++ ....+.+..+.|+|+.|+++|+||++|+|.+... ....+.
T Consensus 139 ~~~~a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~~~~~~~~~~~g~~~~~~~~~~~ 218 (357)
T 3nur_A 139 EPEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPVNSDIYQSYYKGNYPEVTAATFA 218 (357)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECCCCCHHHHHHHTCCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecCCCCccccccccccCcccchhhhhh
Confidence 345556666776532 1 23222 2345778889999999999999999999875210 000000
Q ss_pred --------------CccchHHHHhhcCCCCceEEEecCC--CCcHHHHHHHHh----------h--CCeeEeccccccCC
Q 005679 247 --------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYLAY----------V--YPQVYLDFGLAIPK 298 (683)
Q Consensus 247 --------------~p~~L~~l~~~~~~P~l~~vl~H~g--~p~~~e~~~la~----------~--~pnVy~d~s~~~~~ 298 (683)
.++.+..+++ |||++|||+.|+| .||..+....+. . .+|||+|+|+++.
T Consensus 219 ~~~~~~~~~t~~~~~~li~~gv~~--rfP~LkiilaH~Gg~~P~~~~rld~~~~~~~l~~~ps~~~~~nvy~~~sg~~~- 295 (357)
T 3nur_A 219 CFGYGWHIDVGIHAIHLVLSGIFD--RYPKLNMIIGHWGEFIPFFLERMDEALFAEHLNHSVSYYFKNSFYITPSGMLT- 295 (357)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTHHH--HSTTCCEEECGGGTTGGGGHHHHHHHSCCTTSSSCHHHHHHHSEEECCTTCCC-
T ss_pred hhhhchhHHHHHHHHHHHHcCchh--hCCCCeEEEecccccHHHHHHHHHhhhccccccCCHHHHHHhceeeecccCCC-
Confidence 0123556777 8999999999998 577654332221 1 1699999998653
Q ss_pred ccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005679 299 LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (683)
Q Consensus 299 ~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly 378 (683)
. ..++.+++..|.+||||||| ||... ... .. ++++. +.+++ +.+++|+++||+|||
T Consensus 296 --~----~~l~~~~~~~g~drilfgSD---~P~~~--~~~-~~--------~~~~~--~~l~~--~~~~~i~~~NA~rl~ 351 (357)
T 3nur_A 296 --K----PQFDLVKKEVGIDRILYAAD---YPYIE--PEK-LG--------VFLDE--LGLTD--EEKEKISYTNGAKLL 351 (357)
T ss_dssp --H----HHHHHHHHHHCGGGBCBCCC---TTTCC--CTT-HH--------HHTTS--SCCCH--HHHHHHHTHHHHHHH
T ss_pred --H----HHHHHHHHHcCCceEEEeCC---CCCCC--chH-HH--------HHHHH--cCCCH--HHHHHHHhHHHHHHh
Confidence 1 25677788889999999999 55321 111 11 22222 23445 779999999999999
Q ss_pred cCCC
Q 005679 379 KINL 382 (683)
Q Consensus 379 ~l~~ 382 (683)
+|+.
T Consensus 352 ~l~~ 355 (357)
T 3nur_A 352 GLSS 355 (357)
T ss_dssp TC--
T ss_pred CCCC
Confidence 9863
No 24
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=99.48 E-value=4.8e-14 Score=147.67 Aligned_cols=145 Identities=12% Similarity=0.073 Sum_probs=100.6
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCC---------cHHHHHHHH
Q 005679 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEASYLA 282 (683)
Q Consensus 212 ~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p---------~~~e~~~la 282 (683)
.+..+.++++.|+++|+||++|++.. .+..+..+++ ++| ++||+.|+|.| +.+++..++
T Consensus 135 ~~~~~~~~~~~a~~~glpv~iH~~~~---------~l~~~~~~l~--~~p-~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~ 202 (294)
T 4i6k_A 135 NTPDWQKFLRNVESLNWQVELHAPPK---------YLVQLLPQLN--EYS-FDVVIDHFGRVDPVKGIEDPDYQKFLSLL 202 (294)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEECCHH---------HHHHHHHHHT--TSS-SCEEESGGGCCCTTTCTTCHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHcCCEEEEeeCcc---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCCHHHHHHHHHH
Confidence 44567788999999999999999731 2335667777 799 99999999976 455566666
Q ss_pred hhCCeeEeccccccCCcc----HHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh-HHHHHHHHHHHHHhhhhcCCC
Q 005679 283 YVYPQVYLDFGLAIPKLS----VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG-AKRAREVVFSVLRDTCIDEDL 357 (683)
Q Consensus 283 ~~~pnVy~d~s~~~~~~~----~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~-~~~~r~~l~~~l~~~v~~g~l 357 (683)
.+||||+++|+...... .......++++++..|.+|+||||| +|.....+ ..+ .+.+ +.+.++ .+
T Consensus 203 -~~~nv~~k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD---~P~~~~~~~~~y-~~~~-~~l~~~----~~ 272 (294)
T 4i6k_A 203 -NVKQHWIKVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSD---WPHTQHESLITY-EDAI-KAFKQI----VF 272 (294)
T ss_dssp -CTTTEEEECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCC---BTCTTCTTTCCH-HHHH-HHHHHH----CC
T ss_pred -hCCCEEEEecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCC---CCCCCCcCCCCH-HHHH-HHHHHH----CC
Confidence 57999999999764321 1122457889999999999999999 55321110 011 1111 223333 23
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCC
Q 005679 358 SVGEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 358 ~~~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
+ + +.+++|+++||+|||+++.
T Consensus 273 ~--~--~~~~~i~~~NA~rl~~l~~ 293 (294)
T 4i6k_A 273 D--K--HEQCLILNQNPTELFGFSR 293 (294)
T ss_dssp C--H--HHHHHHHTHHHHHHHTC--
T ss_pred C--H--HHHHHHHHHCHHHHhCCCC
Confidence 3 4 6799999999999999853
No 25
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=99.45 E-value=5.4e-14 Score=148.79 Aligned_cols=146 Identities=14% Similarity=0.100 Sum_probs=97.6
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCC-----CC--CC-------------CccchHHHHhhcCCCCceEEEe
Q 005679 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLD-----LR--LS-------------NPLHLRAILEDKRFSKCRFVLL 268 (683)
Q Consensus 209 ~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~-----~~--~~-------------~p~~L~~l~~~~~~P~l~~vl~ 268 (683)
..+.+..+.++|+.|+++|+||++|++....+.. .. .. .++.+..+++ +||+++||+.
T Consensus 140 ~~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~--~~P~l~~v~~ 217 (327)
T 2dvt_A 140 LYYDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFD--EHPRLNIILG 217 (327)
T ss_dssp BCTTSGGGHHHHHHHHHHTCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEES
T ss_pred CCCCCcchHHHHHHHHHcCCeEEECCCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHh--hCCCCeEEEe
Confidence 3566778889999999999999999975321100 00 00 0122557777 7999999999
Q ss_pred cCC--CCcHHHHHHH----------------Hhh--CCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCC
Q 005679 269 HAS--YPFSKEASYL----------------AYV--YPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYA 328 (683)
Q Consensus 269 H~g--~p~~~e~~~l----------------a~~--~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~ 328 (683)
|+| .|+..+.... +.. .+|||+|+|+.+. ...++++++..|.+|||||||
T Consensus 218 H~gg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~y~~~sg~~~-------~~~~~~~~~~~g~dril~gSD--- 287 (327)
T 2dvt_A 218 HMGEGLPYMMWRIDHRNAWVKLPPRYPAKRRFMDYFNENFHITTSGNFR-------TQTLIDAILEIGADRILFSTD--- 287 (327)
T ss_dssp GGGTTHHHHHHHHHHTTTTCCSCCSSSCSSCHHHHHHHHEEEECTTCCC-------HHHHHHHHTTTCGGGEECCCC---
T ss_pred cccccHHHHHHHHHhhhhhccccccCCCCCCHHHHHhhcEEEeccCCCC-------HHHHHHHHHHhCcccEEEecC---
Confidence 998 4554322221 112 2799999998652 246888899999999999999
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005679 329 SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 329 ~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
+|.. ......+ ++++-.++ + +.+++|+++||+|||+++
T Consensus 288 ~P~~---~~~~~~~--------~~~~~~l~--~--~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 288 WPFE---NIDHASD--------WFNATSIA--E--ADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp TTTS---CHHHHHH--------HHHHSSSC--H--HHHHHHHTHHHHHHTTCC
T ss_pred CCCc---cHHHHHH--------HHHHCCCC--H--HHHHHHHHHhHHHHhCCC
Confidence 5632 1111111 12222344 4 669999999999999985
No 26
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=99.45 E-value=9.5e-14 Score=145.56 Aligned_cols=148 Identities=16% Similarity=0.213 Sum_probs=97.7
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCC-CCCCCCcc----------------chHHHHhhcCCCCceEEEecCCC
Q 005679 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDL-DLRLSNPL----------------HLRAILEDKRFSKCRFVLLHASY 272 (683)
Q Consensus 210 ~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~-~~~~~~p~----------------~L~~l~~~~~~P~l~~vl~H~g~ 272 (683)
.+.+..+.++++.|+++|+||++|++....+. ......|. .+..+++ +||+++||+.|+|.
T Consensus 131 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~P~l~~v~~H~gg 208 (307)
T 2f6k_A 131 YFGSPVLERVYQELDARQAIVALHPNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFE--KYPNIKVIIPHAGA 208 (307)
T ss_dssp ETTCGGGHHHHHHHHTTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHH--HCTTCEEEESGGGT
T ss_pred CCCcHhHHHHHHHHHHcCCeEEECCCCCccccccccccccchhccchHHHHHHHHHHHhcCccc--cCCCCeEEccCCCc
Confidence 45667889999999999999999998643210 01111121 1345777 79999999999975
Q ss_pred --CcHHHH----------HHHHhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHH
Q 005679 273 --PFSKEA----------SYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRA 340 (683)
Q Consensus 273 --p~~~e~----------~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~ 340 (683)
|+..+. ..+...++|||+|+|++.. ...++.+++..|.+||||||| +|.. .....
T Consensus 209 ~~p~~~~~~~~~~~~~~~~~~~~~~~n~y~~~s~~~~-------~~~l~~~~~~~g~drll~gSD---~P~~---~~~~~ 275 (307)
T 2f6k_A 209 FLGIVDDRIAQYAQKVYQVDVYDVMHHVYFDVAGAVL-------PRQLPTLMSLAQPEHLLYGSD---IPYT---PLDGS 275 (307)
T ss_dssp THHHHHHHHHHHHHHHHCCCHHHHHHHSEEECCSSCT-------TTHHHHHTTTSCGGGEECCCC---TTTS---CHHHH
T ss_pred cchhhHHHHHhhccccCcccHHHHHhheEEeccCCCC-------HHHHHHHHHhcCcccEEEecC---CCCC---CchhH
Confidence 443211 1234456799999998753 136788889999999999999 5522 11111
Q ss_pred HHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcC
Q 005679 341 REVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (683)
Q Consensus 341 r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l 380 (683)
++.+. .+.+ -..++ + +.+++|+++||+|||++
T Consensus 276 ~~~~~-~l~~---~~~l~--~--~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 276 RQLGH-ALAT---TDLLT--N--EQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHHH-HHHH---CTTSC--H--HHHHHHHTHHHHHHHHC
T ss_pred HHHHH-HHhh---ccCCC--H--HHHHHHHHHHHHHHhCc
Confidence 22221 1111 12344 3 66999999999999975
No 27
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=99.38 E-value=6e-13 Score=141.68 Aligned_cols=170 Identities=20% Similarity=0.204 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHhc-C-CCC----ccCchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCC-CCCc-----------
Q 005679 187 KKDAEEGLAEDLRS-G-KPV----RITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR-LSNP----------- 248 (683)
Q Consensus 187 ~~ea~~~~~~~l~~-~-~~~----~~~~~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~-~~~p----------- 248 (683)
.+++.+.+++++.. + .+. ...+..+.+..+.++|+.|+++|+||.+|++....+..+. +..|
T Consensus 122 ~~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (336)
T 2wm1_A 122 PELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWDMQMDGRMAKYWLPWLVGMPAETTI 201 (336)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCSCCCSGGGSSTTHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCCCCccccccccchHHHhccHHHHHH
Confidence 34445556666532 1 222 1234557788899999999999999999998642111111 1111
Q ss_pred ----cchHHHHhhcCCCCceEEEecCC--CCcHHHHH--------HH---------HhhCCeeEeccccccCCccHHHHH
Q 005679 249 ----LHLRAILEDKRFSKCRFVLLHAS--YPFSKEAS--------YL---------AYVYPQVYLDFGLAIPKLSVQGMI 305 (683)
Q Consensus 249 ----~~L~~l~~~~~~P~l~~vl~H~g--~p~~~e~~--------~l---------a~~~pnVy~d~s~~~~~~~~~g~~ 305 (683)
+.+..+++ +||+++||+.|+| .|+..+.. .+ ...+.|+|+|++ .+ . .
T Consensus 202 ~~~~l~~~~v~~--~~P~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ds~-~~---~----~ 271 (336)
T 2wm1_A 202 AICSMIMGGVFE--KFPKLKVCFAHGGGAFPFTVGRISHGFSMRPDLCAQDNPMNPKKYLGSFYTDAL-VH---D----P 271 (336)
T ss_dssp HHHHHHHTTHHH--HCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHSSSCCSCGGGGTTSSEEECC-CC---S----H
T ss_pred HHHHHHHcCchh--hCCCCeEehhcccchHHHHHHHHHhhhhhChhhhhccCCCCHHHHHHhhEEEec-cc---C----H
Confidence 12566787 7999999999997 45442211 22 223359999954 32 1 2
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhc-CCCChhHHHHHHHHHHHHHHHHHhcCCCC
Q 005679 306 SSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCID-EDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (683)
Q Consensus 306 ~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~-g~l~~~ea~~~~~~I~~~NA~rly~l~~~ 383 (683)
..++.+++..|.+|||||||++. +...+.. .+ .++. ..++ + +.+++|+++||+|||+++..
T Consensus 272 ~~l~~~i~~~g~drilfGSD~P~-~~~~~~~----~~--------~l~~~~~l~--~--~~~~~i~~~NA~rl~~l~~~ 333 (336)
T 2wm1_A 272 LSLKLLTDVIGKDKVILGTDYPF-PLGELEP----GK--------LIESMEEFD--E--ETKNKLKAGNALAFLGLERK 333 (336)
T ss_dssp HHHHHHHHHHCTTSEECCCCBTS-TTSCSST----TH--------HHHTCTTSC--H--HHHHHHHTHHHHHHHTCCC-
T ss_pred HHHHHHHHHhCCccEEEeCCCCC-CcCCcCH----HH--------HHHhccCCC--H--HHHHHHHHHHHHHHhCcCcc
Confidence 36778888889999999999432 1111101 11 1221 2344 4 67999999999999999643
No 28
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=99.36 E-value=1.2e-12 Score=139.29 Aligned_cols=147 Identities=21% Similarity=0.303 Sum_probs=95.7
Q ss_pred chhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCC-CC------Cc---------cchHHHHhhcCCCC-ceEEEecC
Q 005679 208 NKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR-LS------NP---------LHLRAILEDKRFSK-CRFVLLHA 270 (683)
Q Consensus 208 ~~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~-~~------~p---------~~L~~l~~~~~~P~-l~~vl~H~ 270 (683)
+..+.+..+.++|+.|+++|+||.+|++....+..+. +. .| +.+..+++ +||+ ++||+.|+
T Consensus 152 ~~~l~d~~~~p~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~v~~--~~P~~l~~v~~H~ 229 (334)
T 2hbv_A 152 DKDLDDATLEAFLTHCANEDIPILVHPWDMMGGQRMKKWMLPWLVAMPAETQLAILSLILSGAFE--RIPKSLKICFGHG 229 (334)
T ss_dssp TBCTTSHHHHHHHHHHHHTTCCEEEECCSCSCTTTTCSTTHHHHTHHHHHHHHHHHHHHHTTGGG--TSCTTCCEEESGG
T ss_pred CCCCCcHHHHHHHHHHHHCCCEEEECCCCCCCCcchhhhhhhhhhhcHHHHHHHHHHHHHcCchh--hCCCcceEEeecc
Confidence 4567788899999999999999999998642211111 11 11 12567777 8999 99999999
Q ss_pred CC--CcHHHHH-------HH---------HhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc
Q 005679 271 SY--PFSKEAS-------YL---------AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET 332 (683)
Q Consensus 271 g~--p~~~e~~-------~l---------a~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~ 332 (683)
|. |+..+.. .+ ...++|+|+|++ .+. ...++.+++..|.+||||||| +|..
T Consensus 230 Gg~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~y~ds~-~~~-------~~~l~~~~~~~g~drilfGSD---~P~~ 298 (334)
T 2hbv_A 230 GGSFAFLLGRVDNAWRHRDIVREDCPRPPSEYVDRFFVDSA-VFN-------PGALELLVSVMGEDRVMLGSD---YPFP 298 (334)
T ss_dssp GTTHHHHHHHHHHHHHHCHHHHTTCCSCGGGGGGGCEEECC-CSS-------HHHHHHHHHHHCGGGEECCCC---BTST
T ss_pred cchHHHHHHHHHhhhhcccccccccCCCHHHHHhhhEEEec-cCC-------HHHHHHHHHHhCcccEEEeCC---CCCC
Confidence 74 4432211 11 112359999954 331 246788888889999999999 4421
Q ss_pred hhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005679 333 YFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 333 ~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
.+.... .+.++...++ + +.+++|+++||+|||+++
T Consensus 299 --~~~~~~--------~~~l~~~~l~--~--~~~~~i~~~NA~rl~~l~ 333 (334)
T 2hbv_A 299 --LGEQKI--------GGLVLSSNLG--E--SAKDKIISGNASKFFNIN 333 (334)
T ss_dssp --TSCSST--------THHHHTSSCC--H--HHHHHHHTHHHHHHHTCC
T ss_pred --CCCcCH--------hhHhhhcCCC--H--HHHHHHHhHHHHHHhCCC
Confidence 111000 0112122444 4 669999999999999985
No 29
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=99.31 E-value=1.3e-12 Score=140.09 Aligned_cols=148 Identities=19% Similarity=0.295 Sum_probs=96.0
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCC-C---CCCCCCCcc-------chHHHHhhcCCCCceEEEecCC--CCcH
Q 005679 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDK-D---LDLRLSNPL-------HLRAILEDKRFSKCRFVLLHAS--YPFS 275 (683)
Q Consensus 209 ~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~-~---~~~~~~~p~-------~L~~l~~~~~~P~l~~vl~H~g--~p~~ 275 (683)
..+.+..+.++|+.|+++|+||.+|++.+.. . ....+..+. .+..+++ +||+++||+.|+| .|+.
T Consensus 154 ~~l~d~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~--~~P~l~~vi~H~Gg~~p~~ 231 (350)
T 2gwg_A 154 PPLTDRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFK--DFPELKFVIPHGGGAVPYH 231 (350)
T ss_dssp CCTTSGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHH--HCTTCCEEESGGGTTTGGG
T ss_pred CCCCCHHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccc--cCCCCcEEeccCCCcchhh
Confidence 4578888999999999999999999986421 0 001111111 1346777 7999999999997 4555
Q ss_pred H----HHHH-H------HhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCc-----c--chhhhH
Q 005679 276 K----EASY-L------AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-----E--TYFLGA 337 (683)
Q Consensus 276 ~----e~~~-l------a~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-----e--~~~~~~ 337 (683)
. .... + ...++|||+|+|... . ..++.+++..|.+|||||||++..+ . .++..
T Consensus 232 ~~r~~~~~~~~~~~~l~~~~~~n~y~d~s~~~----~----~~l~~l~~~~g~dril~gSD~P~~~~~~~p~~~~~~~~- 302 (350)
T 2gwg_A 232 WGRFRGLAQEMKKPLLEDHVLNNIFFDTCVYH----Q----PGIDLLNTVIPVDNVLFASEMIGAVRGIDPRTGFYYDD- 302 (350)
T ss_dssp HHHHHHHHHHTTCCCHHHHTTTTEEEECCCCS----H----HHHHHHHHHSCGGGEECCCCCSSSCCCEETTTTEETTC-
T ss_pred HHHHHHHHHhccCCCcHHHHhhcEEEEecccC----c----HHHHHHHHHhCcccEEEecCCCCCcccCCcccccchhh-
Confidence 2 1111 2 246799999999732 1 3577888999999999999954321 0 01111
Q ss_pred HHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcC
Q 005679 338 KRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (683)
Q Consensus 338 ~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l 380 (683)
..+.+ .+ + ..++ + +.+++|+++||+|||++
T Consensus 303 --~~~~l----~~-~--~~l~--~--~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 303 --TKRYI----EA-S--TILT--P--EEKQQIYEGNARRVYPR 332 (350)
T ss_dssp --THHHH----HH-C--SSSC--H--HHHHHHHTHHHHHHCHH
T ss_pred --HHHHH----Hh-c--cCCC--H--HHHHHHHHHHHHHHHHh
Confidence 11111 11 0 1344 4 67999999999999986
No 30
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=99.29 E-value=2.2e-12 Score=141.52 Aligned_cols=169 Identities=19% Similarity=0.188 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHHHhcC-CCCcc---------CchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCC-----C-----CCCC
Q 005679 186 TKKDAEEGLAEDLRSG-KPVRI---------TNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKD-----L-----DLRL 245 (683)
Q Consensus 186 ~~~ea~~~~~~~l~~~-~~~~~---------~~~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~-----~-----~~~~ 245 (683)
+.+.+.+.++++...+ ++.++ ....+.+..+.|+|+.|+|+|+||++|+|.+... . ...+
T Consensus 173 d~~~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~~~~~~~~~~~~~~~~~~~ 252 (423)
T 4dzi_A 173 DPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSGYLHIAAAWGGKSTFEGF 252 (423)
T ss_dssp SHHHHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCCSTHHHHHHTTCC------
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCCCccccccccccccccccc
Confidence 3455555556655422 23333 2466888899999999999999999999874211 0 0111
Q ss_pred C--Ccc-----------------chHHHHhhcCCCCceEEEecCCCCcHHHHH----HHHhhC-------------CeeE
Q 005679 246 S--NPL-----------------HLRAILEDKRFSKCRFVLLHASYPFSKEAS----YLAYVY-------------PQVY 289 (683)
Q Consensus 246 ~--~p~-----------------~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~----~la~~~-------------pnVy 289 (683)
. .|. .+..+++ |||++|||+.|+|..|..... ...... .|+|
T Consensus 253 ~~~~~~~~~~~~~~~~~~a~~~Li~sGvf~--RfP~Lkiil~h~Gg~wlP~~l~Rld~~~~~~~~~~~~~Pse~~r~n~y 330 (423)
T 4dzi_A 253 GAKDPLDQVLLDDRAIHDTMASMIVHGVFT--RHPKLKAVSIENGSYFVHRLIKRLKKAANTQPQYFPEDPVEQLRNNVW 330 (423)
T ss_dssp -CCCHHHHHHHTTHHHHHHHHHHHHTTHHH--HCTTCCEEEESSCSTHHHHHHHHHHHHHHHCGGGCSSCHHHHHHHHEE
T ss_pred cccchhHHHhccchHHHHHHHHHHHcCchh--hCCCCeEEEeCCCcchHHHHHHHHHHHHHhCccccCCCHHHHHhhCeE
Confidence 1 111 1235666 899999999999865542211 111111 2788
Q ss_pred eccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhc-CCCChhHHHHHHHH
Q 005679 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCID-EDLSVGEAIEVAKD 368 (683)
Q Consensus 290 ~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~-g~l~~~ea~~~~~~ 368 (683)
+++ +. . ..++.+++..|.+||||||| ||.. ...... .+++++ ..++ + +.+++
T Consensus 331 ~t~---~~---~----~~l~~~~~~~G~drilfgSD---yP~~--~~~~~~--------~~~~~~l~~l~--~--~~~~~ 383 (423)
T 4dzi_A 331 IAP---YY---E----DDLPELARVIGVDKILFGSD---WPHG--EGLASP--------VSFTAELKGFS--E--SDIRK 383 (423)
T ss_dssp ECC---CT---T----SCHHHHHHHHCGGGBCCCCC---BTST--TSCSSG--------GGGGGGCTTSC--H--HHHHH
T ss_pred Eee---cC---h----HHHHHHHHHcCcceEEEecC---CCCc--cCccCH--------HHHHHHhcCCC--H--HHHHH
Confidence 853 11 1 14567788889999999999 5532 110000 122222 2344 4 67999
Q ss_pred HHHHHHHHHhcCCCC
Q 005679 369 IFALNAAQFYKINLG 383 (683)
Q Consensus 369 I~~~NA~rly~l~~~ 383 (683)
|+++||+|||+|+..
T Consensus 384 I~~~NA~rl~~l~~~ 398 (423)
T 4dzi_A 384 IMRDNALDLLGVQVG 398 (423)
T ss_dssp HHTHHHHHHHC----
T ss_pred HHHHHHHHHHCCCcc
Confidence 999999999999754
No 31
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=99.28 E-value=9.4e-12 Score=127.44 Aligned_cols=147 Identities=18% Similarity=0.198 Sum_probs=95.7
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC--CceEEEecCCCCcHHHHHHHHhhCC
Q 005679 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (683)
Q Consensus 209 ~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P--~l~~vl~H~g~p~~~e~~~la~~~p 286 (683)
..+.+..+.++++.|+++|+||.+|++.. +..+..+++ ++| ++++|+ |++.....++..++ .++
T Consensus 104 ~~~~~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~--~~p~~~~~~i~-H~~~g~~~~~~~~l-~~~ 169 (265)
T 2gzx_A 104 ADVQKEVFRKQIALAKRLKLPIIIHNREA----------TQDCIDILL--EEHAEEVGGIM-HSFSGSPEIADIVT-NKL 169 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--HTTGGGTCEEE-TTCCSCHHHHHHHH-HTS
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeccc----------HHHHHHHHH--hcCCCCCcEEE-EcCCCCHHHHHHHH-HHC
Confidence 35566778889999999999999999742 234566777 699 899985 55444445555555 468
Q ss_pred eeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh----hhHHHHHHHHHHHHHhhhhcCCCChhHH
Q 005679 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF----LGAKRAREVVFSVLRDTCIDEDLSVGEA 362 (683)
Q Consensus 287 nVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~----~~~~~~r~~l~~~l~~~v~~g~l~~~ea 362 (683)
|+|+++|++...... ..++++++.+|.+|||||||++......+ ....+.+..+ ..+.++ ..++.
T Consensus 170 ~~y~~~sg~~~~~~~----~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~-~~l~~~---~~~~~--- 238 (265)
T 2gzx_A 170 NFYISLGGPVTFKNA----KQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVA-EQIAEL---KGLSY--- 238 (265)
T ss_dssp CCEEEECGGGGCSSC----CHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHH-HHHHHH---TTCCH---
T ss_pred CceEEecceeecCCc----HHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHH-HHHHHH---hCCCH---
Confidence 999999987543211 25777888999999999999643211000 0001122221 112111 23543
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 005679 363 IEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 363 ~~~~~~I~~~NA~rly~l~ 381 (683)
+.+++|+++||+|+|++.
T Consensus 239 -~~~~~i~~~Na~rl~~~~ 256 (265)
T 2gzx_A 239 -EEVCEQTTKNAEKLFNLN 256 (265)
T ss_dssp -HHHHHHHHHHHHHHHC--
T ss_pred -HHHHHHHHHHHHHHhCCc
Confidence 669999999999999985
No 32
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=99.26 E-value=3.5e-11 Score=124.08 Aligned_cols=146 Identities=20% Similarity=0.179 Sum_probs=98.7
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC--CceEEEecCCCCcHHHHHHHHhhCC
Q 005679 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (683)
Q Consensus 209 ~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P--~l~~vl~H~g~p~~~e~~~la~~~p 286 (683)
..+++..+.+.+++|+++|+||.+|++.. +..+..+++ ++| ++++|+ |+...+...+..++. .
T Consensus 115 ~~~q~~~f~~~~~~a~~~~lPv~iH~~~~----------~~~~~~il~--~~p~~~~~~I~-H~~~g~~~~~~~~~~--~ 179 (268)
T 1j6o_A 115 AEVQKRVFVEQIELAGKLNLPLVVHIRDA----------YSEAYEILR--TESLPEKRGVI-HAFSSDYEWAKKFID--L 179 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--HSCCCSSCEEE-TTCCSCHHHHHHHHH--H
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEeCch----------HHHHHHHHH--hcCCCCCCEEE-EcCCCCHHHHHHHHH--C
Confidence 45667788889999999999999999731 334556777 688 999999 986556555555655 3
Q ss_pred eeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh----HHHHHHHHHHHHHhhhhcCCCChhHH
Q 005679 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEA 362 (683)
Q Consensus 287 nVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~----~~~~r~~l~~~l~~~v~~g~l~~~ea 362 (683)
|+|+++|++..+.. ...++++++..|.+|||||||++..+...+.+ ..++.+.+. .+.+. ..++.
T Consensus 180 g~y~~~sg~~~~~~----~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~-~la~~---~~~~~--- 248 (268)
T 1j6o_A 180 GFLLGIGGPVTYPK----NEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVE-TISQV---LGVPE--- 248 (268)
T ss_dssp TEEEEECGGGGCTT----CHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHH-HHHHH---HTSCH---
T ss_pred CCeEEecccccccc----hHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHH-HHHHH---hCcCH---
Confidence 99999998764321 13577888889999999999965431100100 012222221 11110 13443
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 005679 363 IEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 363 ~~~~~~I~~~NA~rly~l~ 381 (683)
+.+++|+++||+|+|++.
T Consensus 249 -e~~~~i~~~Na~rlf~l~ 266 (268)
T 1j6o_A 249 -AKVDEATTENARRIFLEV 266 (268)
T ss_dssp -HHHHHHHHHHHHHHHHSC
T ss_pred -HHHHHHHHHHHHHHhCcc
Confidence 569999999999999984
No 33
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=99.12 E-value=4.7e-10 Score=114.82 Aligned_cols=149 Identities=19% Similarity=0.241 Sum_probs=97.1
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 209 ~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
..+++..+.+.+++|+++|+||.+|++.. +..+..+++..++|++++|+ |+...+..++..++. .|+
T Consensus 106 ~~~q~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~~~~~p~~~~v~-H~~~~~~~~~~~~~~--~g~ 172 (265)
T 1yix_A 106 KVRQQESFIHHIQIGRELNKPVIVHTRDA----------RADTLAILREEKVTDCGGVL-HCFTEDRETAGKLLD--LGF 172 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHHHTTGGGTCEEE-TTCCSCHHHHHHHHT--TTC
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEecCc----------hHHHHHHHHhcCCCCCCEEE-EcCCCCHHHHHHHHH--CCc
Confidence 45566678889999999999999999732 33455566643469999987 996666665566654 399
Q ss_pred EeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCC-ccchh---hhHHHHHHHHHHHHHhhhhcCCCChhHHHH
Q 005679 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PETYF---LGAKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (683)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-Pe~~~---~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~ 364 (683)
|+++|+++.... ...++++++..|.+|+|||||++.. |..+- .....+.+.+. .+.+. ..++. +
T Consensus 173 ~~~~sg~~~~~~----~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~-~l~~~---~~~~~----~ 240 (265)
T 1yix_A 173 YISFSGIVTFRN----AEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAE-YMAVL---KGVAV----E 240 (265)
T ss_dssp EEEECGGGGSTT----CHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHH-HHHHH---HTSCH----H
T ss_pred EEEECCccccCc----hHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHH-HHHHH---hCcCH----H
Confidence 999998654321 1356778888899999999996532 11000 00001222221 11110 13443 5
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 005679 365 VAKDIFALNAAQFYKINL 382 (683)
Q Consensus 365 ~~~~I~~~NA~rly~l~~ 382 (683)
.+++|+++||+|+|+++.
T Consensus 241 ~~~~i~~~Na~rl~~l~~ 258 (265)
T 1yix_A 241 ELAQVTTDNFARLFHIDA 258 (265)
T ss_dssp HHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHhCcCh
Confidence 689999999999999954
No 34
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.90 E-value=3.3e-09 Score=108.26 Aligned_cols=145 Identities=18% Similarity=0.205 Sum_probs=89.4
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC-CceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 210 ~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P-~l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
..++..+.+.+++|.++|+||.+|++.. ...+.++++ ++| ++++|+ |+-......+..++. .|+
T Consensus 110 ~~q~~~f~~~~~~a~~~~~Pv~iH~~~a----------~~~~~~il~--~~~~~~~~i~-H~~~g~~~~~~~~~~--~g~ 174 (259)
T 1zzm_A 110 ERQQWLLDEQLKLAKRYDLPVILHSRRT----------HDKLAMHLK--RHDLPRTGVV-HGFSGSLQQAERFVQ--LGY 174 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESC----------HHHHHHHHH--HHCCTTCEEE-TTCCSCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeccc----------HHHHHHHHH--hcCCCCCEEE-EcCCCCHHHHHHHHH--CCC
Confidence 4455567778999999999999999742 123445666 343 467776 983223333444443 599
Q ss_pred EeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh----HHHHHHHHHHHHHhhhhcCCCChhHHHH
Q 005679 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (683)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~----~~~~r~~l~~~l~~~v~~g~l~~~ea~~ 364 (683)
|++++++..+.. ...++++++..|.+|||++||++..+...+.+ ..+..+.+.. ..+...++. +
T Consensus 175 ~i~~~g~~~~~~----~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~----la~~~g~~~----e 242 (259)
T 1zzm_A 175 KIGVGGTITYPR----ASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAV----LCELRREPA----D 242 (259)
T ss_dssp EEEECGGGGCTT----TCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHH----HHHHCSSCH----H
T ss_pred EEEECceeeccc----cHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHH----HHHHHCcCH----H
Confidence 999998764211 12466777889999999999975432100000 0122222211 111124554 5
Q ss_pred HHHHHHHHHHHHHhcCC
Q 005679 365 VAKDIFALNAAQFYKIN 381 (683)
Q Consensus 365 ~~~~I~~~NA~rly~l~ 381 (683)
.+.+++++||+|+|+++
T Consensus 243 ~~~~~~~~Na~rl~~l~ 259 (259)
T 1zzm_A 243 EIAQALLNNTYTLFNVP 259 (259)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 58999999999999874
No 35
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.85 E-value=1.6e-08 Score=103.46 Aligned_cols=145 Identities=17% Similarity=0.167 Sum_probs=90.9
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC--CceEEEecCCCCcHHHHHHHHhhCCe
Q 005679 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYPQ 287 (683)
Q Consensus 210 ~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P--~l~~vl~H~g~p~~~e~~~la~~~pn 287 (683)
..++..+.+.+++|.++|+||.+|++.. ...+-.+++ ++| ..++|+ |+.......+..++.. |
T Consensus 108 ~~q~~~f~~~l~~a~~~~lpv~iH~~~a----------~~~~~~il~--~~~~~~~~~v~-H~~~g~~~~~~~~~~~--g 172 (264)
T 1xwy_A 108 EEQERAFVAQLRIAADLNMPVFMHCRDA----------HERFMTLLE--PWLDKLPGAVL-HCFTGTREEMQACVAH--G 172 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHG--GGGGGSSCEEE-CSCCCCHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCc----------hHHHHHHHH--hcCCCCCcEEE-EccCCCHHHHHHHHHC--C
Confidence 3445567778999999999999999631 122345666 455 788877 9833233444455543 9
Q ss_pred eEeccccccC-CccHHHHHHHHHHHHhhCCCCcEEEecCCCCC-cc---chhhh----HHHHHHHHHHHHHhhhhcCCCC
Q 005679 288 VYLDFGLAIP-KLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PE---TYFLG----AKRAREVVFSVLRDTCIDEDLS 358 (683)
Q Consensus 288 Vy~d~s~~~~-~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-Pe---~~~~~----~~~~r~~l~~~l~~~v~~g~l~ 358 (683)
+|+++|++.. +.. ...++++++..|.+||||+||++.. |. ..+.+ ..++.+.+.. +.+ ...++
T Consensus 173 ~yi~~~g~~~~~~~----~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~-~a~---~~g~~ 244 (264)
T 1xwy_A 173 IYIGITGWVCDERR----GLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQR-IAH---WRGED 244 (264)
T ss_dssp CEEEECGGGGCTTT----SHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHH-HHH---HHTCC
T ss_pred eEEEECccccCCcC----cHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHH-HHH---HHCcC
Confidence 9999998764 211 1257788899999999999997542 21 00000 0122222211 111 11355
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC
Q 005679 359 VGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 359 ~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
. +.+.+|+++||+|+|+++
T Consensus 245 ~----e~~~~~~~~Na~rl~~l~ 263 (264)
T 1xwy_A 245 A----AWLAATTDANVKTLFGIA 263 (264)
T ss_dssp H----HHHHHHHHHHHHHHHCCC
T ss_pred H----HHHHHHHHHHHHHHhCcc
Confidence 4 558999999999999985
No 36
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.77 E-value=7.4e-08 Score=99.00 Aligned_cols=143 Identities=16% Similarity=0.154 Sum_probs=90.1
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeE
Q 005679 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (683)
Q Consensus 210 ~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy 289 (683)
..++..+.+.+++|.++|+||.+|++.. ...+-++++ ++|..++|+ |+-......+..++. .|+|
T Consensus 122 ~~q~~~f~~~~~la~~~~lPv~iH~~~a----------~~~~~~il~--~~~~~~~v~-H~~~g~~~~~~~~~~--~g~~ 186 (272)
T 2y1h_A 122 EEQRQVLIRQIQLAKRLNLPVNVHSRSA----------GRPTINLLQ--EQGAEKVLL-HAFDGRPSVAMEGVR--AGYF 186 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECTTC----------HHHHHHHHH--HTTCCSEEE-ETCCSCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeCCc----------HHHHHHHHH--hCCCCCEEE-EccCCCHHHHHHHHH--CCCE
Confidence 3345567778999999999999999742 112335677 588788888 872222233444443 4999
Q ss_pred eccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh--hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHH
Q 005679 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF--LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAK 367 (683)
Q Consensus 290 ~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~--~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~ 367 (683)
++++++..+ + ..++++++..|.+|+|++||++..+..-. ....+++..+ ..+.+. ..++. +.+.
T Consensus 187 i~~~g~~~~-~-----~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~-~~la~~---~g~~~----e~~~ 252 (272)
T 2y1h_A 187 FSIPPSIIR-S-----GQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISA-EYIAQV---KGISV----EEVI 252 (272)
T ss_dssp EEECGGGGT-C-----HHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHH-HHHHHH---HTSCH----HHHH
T ss_pred EEECCcccC-c-----HHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHH-HHHHHH---HCcCH----HHHH
Confidence 999987632 1 25778888899999999999764321000 0001122222 111111 13443 5689
Q ss_pred HHHHHHHHHHhcCC
Q 005679 368 DIFALNAAQFYKIN 381 (683)
Q Consensus 368 ~I~~~NA~rly~l~ 381 (683)
+++++||+|+|+++
T Consensus 253 ~~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 253 EVTTQNALKLFPKL 266 (272)
T ss_dssp HHHHHHHHHHSTTH
T ss_pred HHHHHHHHHHHHhH
Confidence 99999999999974
No 37
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.49 E-value=8.7e-07 Score=91.44 Aligned_cols=146 Identities=16% Similarity=0.187 Sum_probs=86.0
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCC-cHHHHHHHHhhCCeeEeccc
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP-FSKEASYLAYVYPQVYLDFG 293 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p-~~~e~~~la~~~pnVy~d~s 293 (683)
.+...+++|.++|+||++|++.+.. .+..+ .+++....|..++++.|++++ ....+..++.. ++|+.++
T Consensus 139 ~~~~~~~~a~~~~~pv~iH~~~~~~-------~~~~~-~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~--G~~i~~~ 208 (291)
T 1bf6_A 139 VFIAAALAHNQTGRPISTHTSFSTM-------GLEQL-ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDL--GAYVQFD 208 (291)
T ss_dssp HHHHHHHHHHHHCCCEEEECGGGCS-------HHHHH-HHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHT--TCEEEEC
T ss_pred HHHHHHHHHHHHCCeEEEeCCCCCC-------hHHHH-HHHHHcCCCchhEEEECCCCCCCHHHHHHHHHC--CCEEEEc
Confidence 4555688899999999999974310 11223 445533577889999999753 44445555554 4555444
Q ss_pred cc--cCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc-hhhh---HHHHHHHHHHHHHhhhhcCCCChhHHHHHHH
Q 005679 294 LA--IPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET-YFLG---AKRAREVVFSVLRDTCIDEDLSVGEAIEVAK 367 (683)
Q Consensus 294 ~~--~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~-~~~~---~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~ 367 (683)
.. ....+...-...++++++.++.+||||+||++..+.. .+.+ ....+..+ .. +....++. +.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~----~~-l~~~g~~~----~~~~ 279 (291)
T 1bf6_A 209 TIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFI----PQ-LRQSGFSQ----ADVD 279 (291)
T ss_dssp CTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTHH----HH-HHHTTCCH----HHHH
T ss_pred cCcccCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHHH----HH-HHHcCCCH----HHHH
Confidence 32 1111111223478888998999999999997543210 0000 11112222 22 22223554 5599
Q ss_pred HHHHHHHHHHhc
Q 005679 368 DIFALNAAQFYK 379 (683)
Q Consensus 368 ~I~~~NA~rly~ 379 (683)
+++++|++|+|+
T Consensus 280 ~~~~~N~~rl~~ 291 (291)
T 1bf6_A 280 VMLRENPSQFFQ 291 (291)
T ss_dssp HHHTHHHHHHCC
T ss_pred HHHHHhHHHHhC
Confidence 999999999985
No 38
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.46 E-value=1.2e-06 Score=91.72 Aligned_cols=145 Identities=17% Similarity=0.162 Sum_probs=84.7
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC-CceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 210 ~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P-~l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
..+...+.+.+++|.++|+||.+|++.. ...+-++++ ++| +..-++.|+-.....++..+.. .|+
T Consensus 123 ~~Q~~~f~~ql~lA~~~~lPv~iH~r~a----------~~~~~~il~--~~~~~~~~~i~H~f~g~~~~~~~~l~--~g~ 188 (301)
T 2xio_A 123 DTQLKYFEKQFELSEQTKLPMFLHCRNS----------HAEFLDITK--RNRDRCVGGVVHSFDGTKEAAAALID--LDL 188 (301)
T ss_dssp HHHHHHHHHTHHHHHHHCCCEEEEEESC----------HHHHHHHHH--HTGGGSSCEEETTCCCCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCc----------hHHHHHHHH--hccCCCCcEEEEccCCCHHHHHHHHh--cCc
Confidence 3344566677899999999999999631 223445666 354 2223458982222333334443 389
Q ss_pred EeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCC----------------cc---ch----h---hhHHHHHH
Q 005679 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS----------------PE---TY----F---LGAKRARE 342 (683)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~----------------Pe---~~----~---~~~~~~r~ 342 (683)
|+++++.. +- . . ...++++..|.+|||++||+++. |. .+ + ....+...
T Consensus 189 yi~~~g~~-~~-~-~---~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~ 262 (301)
T 2xio_A 189 YIGFNGCS-LK-T-E---ANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQ 262 (301)
T ss_dssp EEEECGGG-SS-S-H---HHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHH
T ss_pred EEEEcccc-cC-C-h---HHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHH
Confidence 99999862 21 1 1 12477888999999999997653 21 00 0 00011122
Q ss_pred HHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005679 343 VVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 343 ~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
++ +.+.+. ..++. +.+.+++++||+|+|+++.
T Consensus 263 ~~-~~ia~l---~g~~~----e~~~~~~~~Na~rlf~~~~ 294 (301)
T 2xio_A 263 IL-EIMSAV---RDEDP----LELANTLYNNTIKVFFPVI 294 (301)
T ss_dssp HH-HHHHHH---HTCCH----HHHHHHHHHHHHHHHCCC-
T ss_pred HH-HHHHHH---HCcCH----HHHHHHHHHHHHHHhCchh
Confidence 22 222221 13554 5699999999999999853
No 39
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.39 E-value=8.8e-07 Score=92.00 Aligned_cols=153 Identities=18% Similarity=0.114 Sum_probs=89.0
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCC--ceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSK--CRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 211 l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~--l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
.+...+...+++|.++|+||.+|+... ...+-++++ +++. .++|+ |+-..-..++..+.. -++
T Consensus 111 ~Q~~~F~~ql~lA~e~~lPv~iH~r~a----------~~~~l~il~--~~~~~~~~~V~-H~fsG~~e~a~~~l~--~G~ 175 (287)
T 3rcm_A 111 LQEKALEAQLTLAAQLRLPVFLHERDA----------SERLLAILK--DYRDHLTGAVV-HCFTGEREALFAYLD--LDL 175 (287)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--TTGGGCSCEEE-CSCCCCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEcCCc----------HHHHHHHHH--HcCCCCCeEEE-EeCCCCHHHHHHHHH--CCc
Confidence 334455566889999999999999632 123445666 4543 35555 872222334444433 389
Q ss_pred EeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh----hh----HHHHHHHHHHHHHhhhhcCCCChh
Q 005679 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF----LG----AKRAREVVFSVLRDTCIDEDLSVG 360 (683)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~----~~----~~~~r~~l~~~l~~~v~~g~l~~~ 360 (683)
|+++++++.+. +. ...+++++...|.+|||+.||+++.+...+ .+ ..+...++ +.+++ ...++.
T Consensus 176 yis~~g~i~~~-k~--~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~-~~lA~---~~g~s~- 247 (287)
T 3rcm_A 176 HIGITGWICDE-RR--GTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVL-REVAL---HRGESA- 247 (287)
T ss_dssp EEEECGGGGCT-TT--CGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHH-HHHHH---HHTSCH-
T ss_pred EEEECchhccc-cC--HHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHH-HHHHH---HhCcCH-
Confidence 99999876431 10 125778888999999999999865321101 00 00122222 11111 123554
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcccccC
Q 005679 361 EAIEVAKDIFALNAAQFYKINLGVKDFAS 389 (683)
Q Consensus 361 ea~~~~~~I~~~NA~rly~l~~~~~~~~~ 389 (683)
+.+..+.++|++|+|+++....-|+|
T Consensus 248 ---eev~~~~~~N~~rlf~l~~~~~~~~~ 273 (287)
T 3rcm_A 248 ---EHTAAHTTATARDFFQLPAENLYFQS 273 (287)
T ss_dssp ---HHHHHHHHHHHHHHTTCCCCC-----
T ss_pred ---HHHHHHHHHHHHHHHCCChhhhHHhh
Confidence 55889999999999999766554433
No 40
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.29 E-value=4.4e-06 Score=87.37 Aligned_cols=146 Identities=13% Similarity=0.109 Sum_probs=85.0
Q ss_pred HHHHHHHHHhhCCCcEEEecC-CCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCC-CcHHHHHHHHhhCCeeEecc
Q 005679 215 IFISSLEVAQFLDLPLQIHTG-FGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDF 292 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G-~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~-p~~~e~~~la~~~pnVy~d~ 292 (683)
.+...+++|.++|+||.+|++ .+.. .+..+ +++++...|..++++.|+.. ....++..++.. .+|+.+
T Consensus 152 ~~~~~~~lA~~~~~pv~iH~~~~~~~-------~~~~~-~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~--G~~i~~ 221 (314)
T 2vc7_A 152 VIRAAAIANKETKVPIITHSNAHNNT-------GLEQQ-RILTEEGVDPGKILIGHLGDTDNIDYIKKIADK--GSFIGL 221 (314)
T ss_dssp HHHHHHHHHHHHCCCEEEECCTTTTH-------HHHHH-HHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHT--TCEEEE
T ss_pred HHHHHHHHHHHHCCEEEEeCCCcccC-------hHHHH-HHHHHcCCCcccEEEECCCCCCCHHHHHHHHHc--CCEEEE
Confidence 344567889999999999997 2221 12223 44554356778999999964 223445555554 355444
Q ss_pred cc--ccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc----hhhhH---------HHHHHHHHHHHHhhhhcCCC
Q 005679 293 GL--AIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET----YFLGA---------KRAREVVFSVLRDTCIDEDL 357 (683)
Q Consensus 293 s~--~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~----~~~~~---------~~~r~~l~~~l~~~v~~g~l 357 (683)
+. +..+.+.....+.+.++++.++.+||+++||++..|.. .++.. ...++.+ .. ++...+
T Consensus 222 ~~~~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~----~~-l~~~g~ 296 (314)
T 2vc7_A 222 DRYGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTI----PF-LKRNGV 296 (314)
T ss_dssp CCTTCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHH----HH-HHHTTC
T ss_pred eCCCcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHHH----HH-HHHcCC
Confidence 43 32122223345567777777677999999998543300 01110 0122222 11 222235
Q ss_pred ChhHHHHHHHHHHHHHHHHHhc
Q 005679 358 SVGEAIEVAKDIFALNAAQFYK 379 (683)
Q Consensus 358 ~~~ea~~~~~~I~~~NA~rly~ 379 (683)
+. +.+.+|+++|++|+|+
T Consensus 297 ~~----e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 297 NE----EVIATIFKENPKKFFS 314 (314)
T ss_dssp CH----HHHHHHHTHHHHHHTC
T ss_pred CH----HHHHHHHHHCHHHHhC
Confidence 54 5599999999999985
No 41
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.26 E-value=5.7e-06 Score=88.54 Aligned_cols=152 Identities=16% Similarity=0.053 Sum_probs=90.6
Q ss_pred HHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCC-CcHHHHHHHH-hhCCeeEecccc
Q 005679 217 ISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLA-YVYPQVYLDFGL 294 (683)
Q Consensus 217 ~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~-p~~~e~~~la-~~~pnVy~d~s~ 294 (683)
...++++.++|+||.+|++.|.. + ...+ +++++...|..++++.|++. .....+..++ .. ..|++++.
T Consensus 172 ~aq~~~A~e~glPViiH~r~gr~------a-~d~l-~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~--G~yI~f~g 241 (363)
T 3ovg_A 172 EVAARTSILTGCPILVHTQLGTM------A-LEVA-KHLIGFGANPDKIQISHLNKNPDKYYYEKVIKET--GVTLCFDG 241 (363)
T ss_dssp HHHHHHHHHHCCCEEEEEETTCS------H-HHHH-HHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHH--CCEEEECC
T ss_pred HHHHHHHHHhCCEEEEeCCCCCC------H-HHHH-HHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHC--CcEEEECC
Confidence 33467788999999999986521 1 1223 55554456777899999963 3333333444 22 57877776
Q ss_pred cc--CCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHH------HHHHHHHHHHHhhhhcCCCChhHHHHHH
Q 005679 295 AI--PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAK------RAREVVFSVLRDTCIDEDLSVGEAIEVA 366 (683)
Q Consensus 295 ~~--~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~------~~r~~l~~~l~~~v~~g~l~~~ea~~~~ 366 (683)
.. .+.+...-.+.++++++.++.+|||++||++..|.....+.. .. ..+-.++...++...++. +.+
T Consensus 242 ~~~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p-~~l~~~~~~~a~~rGis~----eei 316 (363)
T 3ovg_A 242 PDRVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGL-AYLFDRFLPLLKQVGVSK----EAI 316 (363)
T ss_dssp TTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCT-HHHHHTHHHHHHHHTCCH----HHH
T ss_pred eeccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCc-cHHHHHHHHHHHHcCCCH----HHH
Confidence 53 111221223478999999999999999998743311011110 00 001112222233334554 559
Q ss_pred HHHHHHHHHHHhcCCCC
Q 005679 367 KDIFALNAAQFYKINLG 383 (683)
Q Consensus 367 ~~I~~~NA~rly~l~~~ 383 (683)
.+++.+|++|+|+++..
T Consensus 317 ~~it~~Np~rlf~l~~~ 333 (363)
T 3ovg_A 317 FDILVNNPKRVLAFDEK 333 (363)
T ss_dssp HHHHTHHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHCCCCc
Confidence 99999999999999644
No 42
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.17 E-value=4.1e-06 Score=85.31 Aligned_cols=145 Identities=14% Similarity=0.035 Sum_probs=86.1
Q ss_pred hhhhHHHHHHHHHHhhCCCcEE-EecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 210 SLIDYIFISSLEVAQFLDLPLQ-IHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 210 ~l~d~~~~~l~e~a~e~glpvq-~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
..+...|...+++|.++++||. +|+.-. ...+-++++ ++|...-++.|+-..-..++..+.. -++
T Consensus 100 ~~Q~~~F~~ql~lA~e~~lPviSiH~r~a----------~~~~~~il~--~~~~~~~~v~H~fsG~~e~a~~~l~--~G~ 165 (254)
T 3gg7_A 100 TQQFAVFQHILRRCEDHGGRILSIHSRRA----------ESEVLNCLE--ANPRSGTPILHWYSGSVTELRRAIS--LGC 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECTTC----------HHHHHHHHH--HCGGGEEEEEETCCSCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEcCCc----------HHHHHHHHH--HcCCCCcEEEEeCCCCHHHHHHHHc--CCc
Confidence 3444456667899999999999 999632 123445666 4664322344872222233333333 379
Q ss_pred EeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh-hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHH
Q 005679 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF-LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAK 367 (683)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~-~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~ 367 (683)
|+.++++... ...+++++...|.+|||+.||+++.|..-- ....+...++ +.+++. ..++. +.+.
T Consensus 166 yis~~g~~~~------~~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~-~~iA~~---~g~~~----ee~~ 231 (254)
T 3gg7_A 166 WFSVGPTMVR------TQKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVV-EGLSKI---WQIPA----SEVE 231 (254)
T ss_dssp EEEECHHHHT------SHHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHH-HHHHHH---HTSCH----HHHH
T ss_pred EEEECcccCc------hHHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHH-HHHHHH---hCcCH----HHHH
Confidence 9999886531 125778888999999999999875441000 0001122222 112211 23554 5588
Q ss_pred HHHHHHHHHHhcCCC
Q 005679 368 DIFALNAAQFYKINL 382 (683)
Q Consensus 368 ~I~~~NA~rly~l~~ 382 (683)
++.++|++++|++..
T Consensus 232 ~~~~~N~~~lf~~~~ 246 (254)
T 3gg7_A 232 RIVKENVSRLLGTVR 246 (254)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHCCCc
Confidence 999999999999864
No 43
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.12 E-value=1.1e-05 Score=85.39 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=87.2
Q ss_pred HHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCC-CCcHHHHHHHHhhCCeeEeccccccC
Q 005679 219 SLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGLAIP 297 (683)
Q Consensus 219 l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g-~p~~~e~~~la~~~pnVy~d~s~~~~ 297 (683)
.++++.++|+||.+|++.|.. + ...+ +++++...|..++++.||. ..-...+..++. -.+|++++++..
T Consensus 173 q~~~A~~~glPViiH~r~g~~------a-~~~l-~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~--~G~~i~~~g~~t 242 (330)
T 3pnz_A 173 VARAHHETKAPIHSHTEAGTM------A-LEQI-EILKQENIPLEYLSIGHMDRNLDPYYHKQVAK--TGAFMSFDGIAK 242 (330)
T ss_dssp HHHHHHHHCCCEEEECGGGCC------H-HHHH-HHHHHTTCCGGGEEETTGGGSCCHHHHHHHHT--TTCEEEECCTTC
T ss_pred HHHHHHHHCCeEEEeCCCCcC------h-HHHH-HHHHHcCCCCCeEEEecCCCCCCHHHHHHHHH--cCcEEEEccCcc
Confidence 467788999999999985411 1 1123 3455435666789999994 223333444443 268999987642
Q ss_pred C--ccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc-hhh-h---HHHHHHHHHHHHHhhhhcCCCChhHHHHH-HHHH
Q 005679 298 K--LSVQGMISSIKELLELAPTKKVMFSTDAYASPET-YFL-G---AKRAREVVFSVLRDTCIDEDLSVGEAIEV-AKDI 369 (683)
Q Consensus 298 ~--~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~-~~~-~---~~~~r~~l~~~l~~~v~~g~l~~~ea~~~-~~~I 369 (683)
. .+...-.+.++++++.++.+||+++||++.-+-. .+. + .......+. .|.+.++...++. +. +.++
T Consensus 243 ~~~~~~~~~~~~l~~lv~~g~~drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~-~l~~~a~~~Gis~----ee~i~~~ 317 (330)
T 3pnz_A 243 IKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVP-RFIDEANEKGFDG----EKLVKKF 317 (330)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHH-HHHHHHHHTTSCH----HHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCCCccCCCCCcchHHHHHHH-HHHHHHHHcCCCH----HHHHHHH
Confidence 1 1111123478888998999999999997631100 000 0 001111111 1111123344553 54 9999
Q ss_pred HHHHHHHHhcCC
Q 005679 370 FALNAAQFYKIN 381 (683)
Q Consensus 370 ~~~NA~rly~l~ 381 (683)
+.+|++|+|+++
T Consensus 318 t~~Np~rlf~l~ 329 (330)
T 3pnz_A 318 FVDNPARCFTFK 329 (330)
T ss_dssp HTHHHHHHSSCC
T ss_pred HHHhHHHHhcCC
Confidence 999999999985
No 44
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.11 E-value=2e-05 Score=84.42 Aligned_cols=148 Identities=15% Similarity=0.180 Sum_probs=88.7
Q ss_pred HHHHHHHhhCCCcEEEec-CCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCC-C-cHHHHHHHHhhCCeeEeccc
Q 005679 217 ISSLEVAQFLDLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-P-FSKEASYLAYVYPQVYLDFG 293 (683)
Q Consensus 217 ~~l~e~a~e~glpvq~H~-G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~-p-~~~e~~~la~~~pnVy~d~s 293 (683)
...++++.+.|+||.+|+ |.|+. ...+-.++++...|..++++.||.. . -...+..++.. .+|++++
T Consensus 193 ~aq~~~A~~~glPV~iH~~gr~~a--------~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~--G~~I~f~ 262 (364)
T 3k2g_A 193 RGAARAQVRTGLPLMVHLPGWFRL--------AHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQR--GAFLEFD 262 (364)
T ss_dssp HHHHHHHHHHCCCEEEECCTTSCC--------HHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHH--TCEEEEC
T ss_pred HHHHHHHHHHCCeEEEecCCCCcc--------HHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhC--CcEEEec
Confidence 334677889999999998 44422 2223335554456667799999942 2 23334444433 6888777
Q ss_pred cc-----cCCc-----cHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc-hhhh---HHHHHHHHHHHHHhhhhcCCCCh
Q 005679 294 LA-----IPKL-----SVQGMISSIKELLELAPTKKVMFSTDAYASPET-YFLG---AKRAREVVFSVLRDTCIDEDLSV 359 (683)
Q Consensus 294 ~~-----~~~~-----~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~-~~~~---~~~~r~~l~~~l~~~v~~g~l~~ 359 (683)
+. |+.. +...-.+.++++++.++.+||+.+||++..|.. .+.+ ....+... . .++...++.
T Consensus 263 g~gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~~~l~~~~~----~-~l~~~Gis~ 337 (364)
T 3k2g_A 263 MIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAFVTKHFL----P-RLRRHGLDD 337 (364)
T ss_dssp CTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSHHHHHHH----H-HHHHTTCCH
T ss_pred CCcccccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCcchHHHHHH----H-HHHHcCCCH
Confidence 64 2210 111224578999999999999999998643311 1111 11112111 1 122234665
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCC
Q 005679 360 GEAIEVAKDIFALNAAQFYKINLG 383 (683)
Q Consensus 360 ~ea~~~~~~I~~~NA~rly~l~~~ 383 (683)
+.+.+++.+|++|+|++...
T Consensus 338 ----eei~~~~~~Np~rlf~l~~~ 357 (364)
T 3k2g_A 338 ----AALETLMVTNPRRVFDASIE 357 (364)
T ss_dssp ----HHHHHHHTHHHHHHHCTTSC
T ss_pred ----HHHHHHHHHHHHHHhCCCcc
Confidence 55999999999999998654
No 45
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.04 E-value=2.4e-05 Score=83.13 Aligned_cols=147 Identities=14% Similarity=0.095 Sum_probs=87.6
Q ss_pred HHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCC-CCcHHHHHHHHhhCCeeEeccccccC
Q 005679 219 SLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGLAIP 297 (683)
Q Consensus 219 l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g-~p~~~e~~~la~~~pnVy~d~s~~~~ 297 (683)
.++++.++|+||.+|+|.|.. + .. .-+++++...|..++++.||. .....++..++. -..|++++.+..
T Consensus 178 q~~lA~~~glPViiH~~~gr~------a-~~-~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~--~G~~i~~~g~~t 247 (339)
T 3gtx_A 178 AARVQRETGVPIITHTQEGQQ------G-PQ-QAELLTSLGADPARIMIGHMDGNTDPAYHRETLR--HGVSIAFDRIGL 247 (339)
T ss_dssp HHHHHHHHCCCEEEECSTTCC------H-HH-HHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHT--TTCEEEECCTTC
T ss_pred HHHHHHHHCCeEEEeCCCCcC------H-HH-HHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHH--cCcEEEEccCcc
Confidence 467788999999999987621 1 11 234565445677789999994 233444445553 268888877521
Q ss_pred --Cc--cHH-HHHHHHHHHHhhCCCCcEEEecCCCCC--ccch-hhhHHHHH------HHHHHHHHhhhhcCCCChhHHH
Q 005679 298 --KL--SVQ-GMISSIKELLELAPTKKVMFSTDAYAS--PETY-FLGAKRAR------EVVFSVLRDTCIDEDLSVGEAI 363 (683)
Q Consensus 298 --~~--~~~-g~~~~l~~~le~~~~~kilfgSD~~~~--Pe~~-~~~~~~~r------~~l~~~l~~~v~~g~l~~~ea~ 363 (683)
+. +.. .-.+.++++++.++.+||+++||++.. |.-. .+.....+ ..+...+...++...++.
T Consensus 248 ~~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~~~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~---- 323 (339)
T 3gtx_A 248 QGMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPLHISDDILPDLRRRGITE---- 323 (339)
T ss_dssp CSSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCH----
T ss_pred ccccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCccccCCcccccccccccCCCCCchhHHHHHHHHHHHcCCCH----
Confidence 10 011 123478899999999999999998752 1100 00010000 011122223333345665
Q ss_pred HHHHHHHHHHHHHHhc
Q 005679 364 EVAKDIFALNAAQFYK 379 (683)
Q Consensus 364 ~~~~~I~~~NA~rly~ 379 (683)
+.+.+++.+|++|+|+
T Consensus 324 e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 324 EQVGQMTVGNPARLFG 339 (339)
T ss_dssp HHHHHHHTHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 5599999999999985
No 46
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=98.00 E-value=3.7e-05 Score=81.40 Aligned_cols=145 Identities=17% Similarity=0.098 Sum_probs=85.8
Q ss_pred HHHHHhhCCCcEEEecCC-CCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCC-CcHHHHHHHHhhCCeeEeccc--c
Q 005679 219 SLEVAQFLDLPLQIHTGF-GDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDFG--L 294 (683)
Q Consensus 219 l~e~a~e~glpvq~H~G~-Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~-p~~~e~~~la~~~pnVy~d~s--~ 294 (683)
.++++.++|+||.+|+|. |. .+. .+-.++++...+..++++.||.. .-...+..++. -.+|++++ +
T Consensus 153 q~~lA~~~glPv~iH~~~~~r------~a~--e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~--~G~~i~~~~~G 222 (330)
T 2ob3_A 153 AARASLATGVPVTTHTAASQR------DGE--QQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAA--RGYLIGLDHIP 222 (330)
T ss_dssp HHHHHHHHCCCEEEECCGGGT------HHH--HHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHH--TTCEEEECCTT
T ss_pred HHHHHHHhCCeEEEECCCCCC------CHH--HHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHh--CCCEEEeCCCc
Confidence 467888999999999972 21 011 22235554345566889999842 22233334443 27898888 4
Q ss_pred ccCC--------------ccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh---hhHH-------HHHHHHHHHHHh
Q 005679 295 AIPK--------------LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF---LGAK-------RAREVVFSVLRD 350 (683)
Q Consensus 295 ~~~~--------------~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~---~~~~-------~~r~~l~~~l~~ 350 (683)
+..+ .+...-.+.++++++.+|.+|||++||++.++. .+ .+.. .+...+..++.+
T Consensus 223 ~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~-~~~~~~g~~~~~n~pn~~~~~~~~~ia~ 301 (330)
T 2ob3_A 223 YSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFS-SYVTNIMDVMDRVNPDGMAFIPLRVIPF 301 (330)
T ss_dssp CCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEEC-SSSTTHHHHHHHHCTTGGGHHHHTHHHH
T ss_pred cccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCcc-cccccCCCcccccCCCCcchHHHHHHHH
Confidence 4322 111112346889999999999999999764111 01 0111 111123334444
Q ss_pred hhhcCCCChhHHHHHHHHHHHHHHHHHhc
Q 005679 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (683)
Q Consensus 351 ~v~~g~l~~~ea~~~~~~I~~~NA~rly~ 379 (683)
+.+. .++. +.+.++...|++|+|+
T Consensus 302 l~~~-G~~~----eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 302 LREK-GVPQ----ETLAGITVTNPARFLS 325 (330)
T ss_dssp HHHT-TCCH----HHHHHHHTHHHHHHHS
T ss_pred HHHc-CCCH----HHHHHHHHHHHHHHhc
Confidence 4443 3665 4589999999999998
No 47
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.95 E-value=3.4e-06 Score=86.35 Aligned_cols=138 Identities=19% Similarity=0.235 Sum_probs=77.5
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEeccc-
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFG- 293 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~s- 293 (683)
.+...+++|.++|+||++|+..+.. ......+-++++....|..+.++.|++....+ .+.. -++|++++
T Consensus 111 ~f~~ql~lA~e~~lPv~iH~r~~~~-----~~a~~~~~~il~~~~~~~~~~vi~H~~~~~a~---~~l~--~G~yis~~~ 180 (261)
T 3guw_A 111 VLKSQLELAKRMDVPCIIHTPRGNK-----LKATRKTLEILESLDFPADLAVIDHVNFETLD---MVLE--TEYWIGLTV 180 (261)
T ss_dssp HHHHHHHHHHHHTCCEEEECCSSST-----THHHHHHHHHHHHTTCCTTSEEEESCCTTTHH---HHHT--SSSEEEEEC
T ss_pred HHHHHHHHHHHhCCeEEEEcCCCcc-----cchHHHHHHHHHHcCCCCCCEEEEeCCHHHHH---HHHh--CCEEEEecC
Confidence 4445678999999999999974310 01122345566643456677888999544433 2222 37999988
Q ss_pred --cccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHH
Q 005679 294 --LAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFA 371 (683)
Q Consensus 294 --~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~ 371 (683)
++..+ + ..++++...|.+|||+.||+++-|.. ..+..+.+ +.+.+. ..+ + + +.++++
T Consensus 181 ~pg~~t~--~-----~~~~~v~~ipldrlLlETD~P~~pn~----P~~v~~~~-~~la~~---~g~--~---~-v~~~~~ 239 (261)
T 3guw_A 181 QPGKLSA--E-----DAARIVAEHGPERFMLNSDAGYRDVE----ITTVAEAA-VKIEEA---VGR--E---E-MEKVAR 239 (261)
T ss_dssp C--------------CCTTGGGGCC-CCEEEECCCCCC----------CCCCT-THHHHH---CTT--G---G-GGHHHH
T ss_pred CCCcccH--H-----HHHHHHHhCCcceEEEecCCCCCCCC----HHHHHHHH-HHHHhh---CCh--h---H-HHHHHH
Confidence 54321 1 12567788999999999997643311 00111111 011110 112 2 2 889999
Q ss_pred HHHHHHhcCCCC
Q 005679 372 LNAAQFYKINLG 383 (683)
Q Consensus 372 ~NA~rly~l~~~ 383 (683)
+||+|+|+++..
T Consensus 240 ~Na~rlf~~~~~ 251 (261)
T 3guw_A 240 ENARKFLRVLEA 251 (261)
T ss_dssp SSHHHHTTC---
T ss_pred HHHHHHHCCCch
Confidence 999999998643
No 48
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.95 E-value=4.7e-05 Score=81.60 Aligned_cols=151 Identities=15% Similarity=0.146 Sum_probs=88.9
Q ss_pred HHHHHhhC-CCcEEEec-CCCCCCCCCCCCCccchHHHHhhc-CCCCceEEEecCCC--CcHHHHHHHHhhCCeeEeccc
Q 005679 219 SLEVAQFL-DLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDK-RFSKCRFVLLHASY--PFSKEASYLAYVYPQVYLDFG 293 (683)
Q Consensus 219 l~e~a~e~-glpvq~H~-G~Gd~~~~~~~~~p~~L~~l~~~~-~~P~l~~vl~H~g~--p~~~e~~~la~~~pnVy~d~s 293 (683)
.++++.++ |+||.+|+ +.++. ....-.++++. ..|..++++.||.. .-...+..++. -.+|++++
T Consensus 184 q~~~A~~~~glPV~iH~~r~~~a--------~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~--~G~~I~~~ 253 (365)
T 3rhg_A 184 AALAQNNNPYASMNIHMPGWQRR--------GDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLD--RGVWLEFD 253 (365)
T ss_dssp HHHHHTTCTTCEEEEECCTTSCC--------HHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHH--TTCEEEEC
T ss_pred HHHHHHHhcCCcEEEECCCCCcC--------HHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHh--CCCEEEec
Confidence 46788899 99999998 64422 22233455543 45666799999942 22334444443 26888877
Q ss_pred cc-----cCCc----cHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHH
Q 005679 294 LA-----IPKL----SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (683)
Q Consensus 294 ~~-----~~~~----~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~ 364 (683)
+. ++.. +...-.+.++++++.++.+||+++||++..+..-+.+.......+ ..+...++...++. +
T Consensus 254 g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l~-~~~~~~~~~~Gis~----e 328 (365)
T 3rhg_A 254 MIGLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFVP-NVFLSLLAQRGIDK----T 328 (365)
T ss_dssp CTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHHH-HTHHHHHHHTTCCH----H
T ss_pred CCCccccccccccccchHHHHHHHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhHH-HHHHHHHHHcCCCH----H
Confidence 64 2110 011223478899999999999999998754421110000000011 11111222334665 5
Q ss_pred HHHHHHHHHHHHHhcCCCCc
Q 005679 365 VAKDIFALNAAQFYKINLGV 384 (683)
Q Consensus 365 ~~~~I~~~NA~rly~l~~~~ 384 (683)
.+.+++.+|++|+|+++..+
T Consensus 329 ~i~~~~~~Np~rlf~l~~~~ 348 (365)
T 3rhg_A 329 IIDKLCIDNPANLLAAENLY 348 (365)
T ss_dssp HHHHHTTHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHHHHCCCCcc
Confidence 59999999999999996554
No 49
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.83 E-value=0.00016 Score=77.28 Aligned_cols=150 Identities=15% Similarity=0.074 Sum_probs=84.9
Q ss_pred HHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCC-CcHHHHHHHHhhCCeeEeccccc
Q 005679 217 ISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDFGLA 295 (683)
Q Consensus 217 ~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~-p~~~e~~~la~~~pnVy~d~s~~ 295 (683)
....+++.+.|+||.+|+..+.. .+..++-+.+. ..|--++++.|+++ .-...+..++..--.+.+|.-++
T Consensus 196 rA~a~aa~etG~Pv~iHt~~~~~-------~~e~l~iL~ee-G~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~ 267 (360)
T 3tn4_A 196 RAAARAQKETGAVIITHTQEGTM-------GPEQAAYLLEH-GADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGI 267 (360)
T ss_dssp HHHHHHHHHHCCEEEEECSTTCC-------HHHHHHHHHHT-TCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTC
T ss_pred HHHHHHHHHhCCcEEEEcCcccC-------CHHHHHHHHHc-CCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEccccc
Confidence 33567888999999999986521 13345444443 55667899999532 22222344554433444543222
Q ss_pred cCC--ccHH-HHHHHHHHHHhhCCCCcEEEecCCC----CCccchhhhHHH------HHHHHHHHHHhhhhcCCCChhHH
Q 005679 296 IPK--LSVQ-GMISSIKELLELAPTKKVMFSTDAY----ASPETYFLGAKR------AREVVFSVLRDTCIDEDLSVGEA 362 (683)
Q Consensus 296 ~~~--~~~~-g~~~~l~~~le~~~~~kilfgSD~~----~~Pe~~~~~~~~------~r~~l~~~l~~~v~~g~l~~~ea 362 (683)
... .+.+ .-.+.++++++.++.+|||.+||+. ..|.....+.+. +-..+.+++..+-++| ++.
T Consensus 268 ~~~~~~p~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~L~~~G-vs~--- 343 (360)
T 3tn4_A 268 QGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPALKNEG-IRD--- 343 (360)
T ss_dssp CCSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHHHHHTT-CCH---
T ss_pred ccccCCCChHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHHHHHcC-CCH---
Confidence 111 1111 2234789999999999999999961 112100001110 1123444455443333 443
Q ss_pred HHHHHHHHHHHHHHHhc
Q 005679 363 IEVAKDIFALNAAQFYK 379 (683)
Q Consensus 363 ~~~~~~I~~~NA~rly~ 379 (683)
+.+++|+.+|++|+|-
T Consensus 344 -e~I~~i~~~NP~rlfs 359 (360)
T 3tn4_A 344 -EVLEQMFIGNPAALFS 359 (360)
T ss_dssp -HHHHHHHTHHHHHHHC
T ss_pred -HHHHHHHHHhHHHHhc
Confidence 5699999999999983
No 50
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=97.51 E-value=0.0011 Score=69.82 Aligned_cols=95 Identities=15% Similarity=0.147 Sum_probs=58.4
Q ss_pred HHHHHHHHHhh-CCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCC-cHHHHHHHHhhCCeeEecc
Q 005679 215 IFISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP-FSKEASYLAYVYPQVYLDF 292 (683)
Q Consensus 215 ~~~~l~e~a~e-~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p-~~~e~~~la~~~pnVy~d~ 292 (683)
.|...+++|.+ +++||.+|+--. . ..+-++++....+..+.|+ |+ +. -..++..+.. -+.|+++
T Consensus 155 ~F~~ql~lA~e~~~lPviiH~r~A---------~-~d~l~iL~~~~~~~~~gVi-H~-FsGs~e~a~~~l~--lG~yis~ 220 (325)
T 3ipw_A 155 GYRTLSILHQKYPYLPFFFHCRKS---------W-SDLCQLNKELGYNGCKGVV-HC-FDGTEEEMNQILN--EGWDIGV 220 (325)
T ss_dssp HHHHTHHHHHHCTTCCEEEEEESC---------H-HHHHHHHHHTTCTTSCEEE-CS-CCCCHHHHHHHHH--TTCEEEE
T ss_pred HHHHHHHHHHHhhCCeEEEEeCch---------H-HHHHHHHHhcCCCCCcEEE-EE-CCCCHHHHHHHHh--cCcEEee
Confidence 34445788999 999999999532 1 1233456631222345555 98 22 2233333332 2699999
Q ss_pred ccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCC
Q 005679 293 GLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS 329 (683)
Q Consensus 293 s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~ 329 (683)
++.. +-. .+.+ +++...|.+|||.-||+++.
T Consensus 221 ~G~~-~k~----~~~~-~~v~~iPldrlLlETDaP~l 251 (325)
T 3ipw_A 221 TGNS-LQS----IELL-NVMKQIPIERLHIETDCPYC 251 (325)
T ss_dssp CSGG-GSS----HHHH-HHHTTSCGGGEEECCCTTSC
T ss_pred Cccc-cCc----HHHH-HHHHhCCcccEEEeCCCccc
Confidence 8863 111 1123 68889999999999998764
No 51
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=96.57 E-value=0.0019 Score=68.50 Aligned_cols=150 Identities=14% Similarity=0.165 Sum_probs=80.8
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCc----cchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEe
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNP----LHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p----~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~ 290 (683)
.+..+++.+++.|.||.+|.+..+..++...+.. ..+..++. +++++++++.|.+.....++..-+ ..||++
T Consensus 121 ~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la--~~~~~~~hi~Hvst~~~~~~i~~a--k~~Vt~ 196 (347)
T 2z26_A 121 AIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQ--RLTALKVVFEHITTKDAADYVRDG--NERLAA 196 (347)
T ss_dssp GGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHH--HSTTCCEEECSCCSHHHHHHHHTS--CTTEEE
T ss_pred HHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHH--hhcCCcEEEEECCcHHHHHHHHHh--CCCceE
Confidence 4555688888999999999985431111100011 11221344 589999999999753322222222 268999
Q ss_pred ccccccCCccH--------------------HHHHHHHHHHHhhCCCCcE--EEecCCCCCccchhhhHHH-------H-
Q 005679 291 DFGLAIPKLSV--------------------QGMISSIKELLELAPTKKV--MFSTDAYASPETYFLGAKR-------A- 340 (683)
Q Consensus 291 d~s~~~~~~~~--------------------~g~~~~l~~~le~~~~~ki--lfgSD~~~~Pe~~~~~~~~-------~- 340 (683)
+++.....+.. ..-+..|.+.+. -++| +++||.-++.. ..+. .
T Consensus 197 e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~---~G~id~~i~SDhaP~~~----~~K~~~~g~~Gi~ 269 (347)
T 2z26_A 197 TITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVA---SGFNRVFLGTDSAPHAR----HRKESSCGCAGCF 269 (347)
T ss_dssp EECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHH---TTCTTEEECCCBCCCCH----HHHSSSSBCCCCC
T ss_pred eecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHh---cCCCCeEEecCCCCCCH----HHhcCCCCCCCcC
Confidence 87754311111 112223333333 2455 79999532221 1110 0
Q ss_pred --HHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005679 341 --REVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 341 --r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
...+.-++ ..+ ++.+++++ +.+++..|++|+|||.
T Consensus 270 ~~e~~l~l~~-~~~-~~~~sl~~----~v~~~s~nPAki~gl~ 306 (347)
T 2z26_A 270 NAPTALGSYA-TVF-EEMNALQH----FEAFCSVNGPQFYGLP 306 (347)
T ss_dssp CTTTHHHHHH-HHH-HHTTCGGG----HHHHHHTHHHHHHTCC
T ss_pred cHHHHHHHHH-HHh-hcCCCHHH----HHHHHhHhHHHHhCCC
Confidence 11111111 223 24567765 7788899999999994
No 52
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=96.57 E-value=0.034 Score=59.74 Aligned_cols=57 Identities=14% Similarity=0.197 Sum_probs=37.5
Q ss_pred EEecCCCCcHHHHHHHHhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCC
Q 005679 266 VLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYA 328 (683)
Q Consensus 266 vl~H~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~ 328 (683)
+++||=..-..++-.+...-+|+|+.+++.. +-+ . ...+++..+|.+|||.-||+++
T Consensus 250 ~V~H~FsGs~e~a~~~l~lG~~~yis~~g~~-~k~----~-~~~e~v~~iPldrLLlETDaP~ 306 (401)
T 3e2v_A 250 LVVHSFTGSAIDLQKLLNLSPNIFIGVNGCS-LRT----E-ENLAVVKQIPTERLLLETDAPW 306 (401)
T ss_dssp EEECSCCCCHHHHHHHHHHCTTEEEEECGGG-GSS----H-HHHHHHHTSCGGGEEECCCTTS
T ss_pred EEEEcCCCCHHHHHHHHhCCCCEEEEeCCEe-cCC----H-HHHHHHHhCCchhEEEecCCCC
Confidence 4569811123444455545588999999863 211 1 2237788899999999999875
No 53
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=95.82 E-value=0.037 Score=58.04 Aligned_cols=69 Identities=9% Similarity=0.135 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCC---------------------------CCccchhhhHHHHHHHHHHHHHhhhh
Q 005679 301 VQGMISSIKELLELAPTKKVMFSTDAY---------------------------ASPETYFLGAKRAREVVFSVLRDTCI 353 (683)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~---------------------------~~Pe~~~~~~~~~r~~l~~~l~~~v~ 353 (683)
.+.+.+.+..+.+.+|.++|.+|||.. ..|.- +.....+. ++..++.+
T Consensus 225 ~~~~~~hi~~i~~~~G~dhVgiGsDf~~~~~~~~~~~~~~~dg~~~~~~~~G~~~~~~g-l~~~~~~~----~l~~~L~~ 299 (325)
T 2i5g_A 225 IDDYAEAIEYVMNIVGEDAIGIGTDFTQGHGHDFFEWLTHDKGYARRLTNFGKIVNPLG-IRTVGEFP----NLTETLLK 299 (325)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCCBCTTCCHHHHHHHHBGGGTSSBCCCCCSCCCCBT-CSSGGGTH----HHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEECCcCcccccccchhhhcccccccccccccCCCCCccc-CCCHHHHH----HHHHHHHH
Confidence 456777888899999999999999941 11110 00122222 22333444
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHhc
Q 005679 354 DEDLSVGEAIEVAKDIFALNAAQFYK 379 (683)
Q Consensus 354 ~g~l~~~ea~~~~~~I~~~NA~rly~ 379 (683)
.| ++. +.+++|+++|+.|+|+
T Consensus 300 ~G-~se----~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 300 RG-MPE----RVVRKVMGENWVRVLR 320 (325)
T ss_dssp TT-CCH----HHHHHHHTHHHHHHHH
T ss_pred cC-CCH----HHHHHHHHHHHHHHHH
Confidence 44 554 5599999999999985
No 54
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=93.38 E-value=0.11 Score=56.85 Aligned_cols=85 Identities=21% Similarity=0.290 Sum_probs=58.8
Q ss_pred eeeeeeeeEEEEEeecccCCCCCcccCCCCCcccCCcccchHHHHHHHHHHH-HhCCC-------ce-------eEeecc
Q 005679 524 VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADL-HSLNI-------SV-------EQLHAE 588 (683)
Q Consensus 524 ~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ei~~~l-~~~Gi-------~v-------e~~h~E 588 (683)
.+++|+|+|+++++.. ++ .|. ++. -..++++.| ...|. .+ ..+..|
T Consensus 34 ~~~iGvE~E~~lVd~~--~~----~~~---------~~~----~~~~lL~~l~~~~g~~~~~~~~~~~~l~~~~~~i~~E 94 (449)
T 2gwd_A 34 KWRIGTEHEKFGFEVN--TL----RPM---------KYD----QIAELLNSIAERFEWEKVMEGDKIIGLKQGKQSISLE 94 (449)
T ss_dssp GCCEEEEEEEEEEETT--TC----CBC---------CHH----HHHHHHHHHHHHHTCEEEEETTEEEEEEETTEEEEEC
T ss_pred CCeEEEEeEEEeeecC--CC----CCC---------ChH----HHHHHHHHHHHhhccCccccccccccccCCCceEEec
Confidence 5899999999999861 11 111 001 223444444 22232 11 126677
Q ss_pred CCCCceEEecCcC-hHHHHHHHHHHHHHHHHHHHHHcCCeE
Q 005679 589 AGKGQFEIALGHT-VAAKAADNLIFTREVLRAVARKHGLLA 628 (683)
Q Consensus 589 ~~pGQ~Ei~l~~~-~~l~aaD~~~~~k~~ik~vA~~~G~~A 628 (683)
-+ +|+|++..|. +.-++++++...+..++++|+++|+..
T Consensus 95 ~~-~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l 134 (449)
T 2gwd_A 95 PG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGF 134 (449)
T ss_dssp TT-CCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEE
T ss_pred CC-ceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCce
Confidence 76 9999999997 577899999999999999999999764
No 55
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=93.27 E-value=0.16 Score=53.89 Aligned_cols=70 Identities=7% Similarity=0.049 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCC--CccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005679 301 VQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (683)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~--~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly 378 (683)
.+.+.+.+..+.+++|.+.|-+|||.-+ .|.. +.....+ -+++.++.++| ++. +.+++|+++|..|++
T Consensus 282 l~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~g-l~d~s~~----p~L~~~L~~rG-~se----~~i~ki~g~N~lRvl 351 (364)
T 3ly0_A 282 WEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQG-IADVTGL----PALQAAMRAHG-YDE----PLMRKLCHENWYGLL 351 (364)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTT-TCSGGGH----HHHHHHHHHHT-CCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCC-CCCHHHH----HHHHHHHHHCC-CCH----HHHHHHHhHhHHHHH
Confidence 4567788999999999999999999432 2221 0111112 23333444444 554 559999999999999
Q ss_pred cC
Q 005679 379 KI 380 (683)
Q Consensus 379 ~l 380 (683)
+-
T Consensus 352 ~~ 353 (364)
T 3ly0_A 352 ER 353 (364)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 56
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=91.82 E-value=0.49 Score=50.73 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=47.0
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEecCCCC---CccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHH
Q 005679 300 SVQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (683)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~---~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~r 376 (683)
+.+.+.+.+..+.+++|.+.|-+|||.-+ .|+. +.....+ -+++.++.++| ++. +.+++|+++|..|
T Consensus 295 tl~dv~~HIdhi~~l~G~dhVgiGsDfDG~~~~P~g-l~dvs~~----p~L~~~L~~rG-~se----~di~ki~g~N~lR 364 (400)
T 3id7_A 295 TVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDG-LGDVSGY----PNLIAELLDRG-WSQ----SDLAKLTWKNAVR 364 (400)
T ss_dssp BHHHHHHHHHHHHHHHCGGGEEECCCBTTCSCCCBT-CSSTTCH----HHHHHHHHHTT-CCH----HHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEECCCCCCCCCCCCC-CCCHHHH----HHHHHHHhhcC-CCH----HHHHHHHHHhHHH
Confidence 34567778999999999999999999533 2321 1111112 22334444444 554 5599999999999
Q ss_pred HhcC
Q 005679 377 FYKI 380 (683)
Q Consensus 377 ly~l 380 (683)
+++-
T Consensus 365 vl~~ 368 (400)
T 3id7_A 365 VLDA 368 (400)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9964
No 57
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=91.73 E-value=2.6 Score=44.05 Aligned_cols=143 Identities=16% Similarity=0.084 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCC---CcHHHHHHHHhhCCeeE
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY---PFSKEASYLAYVYPQVY 289 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~---p~~~e~~~la~~~pnVy 289 (683)
+..+..+++.|.++|+|+.+|++-.. ........+....+.+ .+ .+.|+.. +...+....+... +++
T Consensus 173 ~~~l~~~~~~a~~~g~~v~~H~~~~~----~~~~~~~~i~~~~~~G----~~-~i~H~~~~~~~~~~~~~~~~~~~-g~~ 242 (386)
T 2vun_A 173 PEDAAPMVEWAHKHGFKVQMHTGGTS----IPGSSTVTADDVIKTK----PD-VVSHINGGPTAISVQEVDRIMDE-TDF 242 (386)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSCCS----CSTTCSCCHHHHHHHC----CS-EEETTTCSSSCCCHHHHHHHHHH-CCC
T ss_pred HHHHHHHHHHHHHCCCeEEEecCCcc----ccccCHHHHHHHHHcC----CC-EEEEccCCCCCCCHHHHHHHHHc-CCe
Confidence 44566778999999999999997321 0111222345555532 22 3789755 1333333333221 444
Q ss_pred e-ccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCC-CCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHH
Q 005679 290 L-DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAY-ASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAK 367 (683)
Q Consensus 290 ~-d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~-~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~ 367 (683)
+ .+.. .+. .......++++++....+++++|||++ .++.. ..+. ..+.+. .+++ ..++..+ +-
T Consensus 243 vl~~~~-~g~--~~~~~~~~~~~~~~g~~d~v~lgTD~p~~~~~~-~~g~--~~~~~~----~~~~-~~ls~~~----~~ 307 (386)
T 2vun_A 243 AMEIVQ-CGN--PKIADYVARRAAEKGQLGRVIFGNDAPSGTGLI-PLGI--LRNMCQ----IASM-SDIDPEV----AV 307 (386)
T ss_dssp EEEEES-SSC--HHHHHHHHHHHHHHTCGGGEEEECCBSBTTBBC-TTHH--HHHHHH----HHHH-SCCCHHH----HH
T ss_pred EEEecc-CCc--ccccHHHHHHHHHcCCCceeEEecCCCCCCCCC-cchh--HHHHHH----HHhh-cCCCHHH----HH
Confidence 4 1100 000 112234678888888788999999973 22111 1111 111221 1122 4577654 66
Q ss_pred HHHHHHHHHHhcC
Q 005679 368 DIFALNAAQFYKI 380 (683)
Q Consensus 368 ~I~~~NA~rly~l 380 (683)
+++..|++++|++
T Consensus 308 ~~~T~n~A~~lgl 320 (386)
T 2vun_A 308 CMATGNSTAVYGL 320 (386)
T ss_dssp HHHTHHHHHHHTC
T ss_pred HHHhHHHHHHcCC
Confidence 6778899999998
No 58
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=90.87 E-value=0.95 Score=48.86 Aligned_cols=70 Identities=11% Similarity=0.102 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCCC--ccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005679 301 VQGMISSIKELLELAPTKKVMFSTDAYAS--PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (683)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~--Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly 378 (683)
...+.+.+..+.+++|.+.|-+|||.-.. |+. +.....+. +++.+++++| ++. +.+++|+++|..|++
T Consensus 335 l~~~~~Hidhi~~~~G~dhVGiGsDfDG~~~~~g-l~dvs~~p----~l~~~L~~rG-~se----~di~ki~ggN~lRVl 404 (417)
T 3b40_A 335 LKELVDAIDYTVKKVGIDHVGISSDFNDGGGVDG-WKDVSEIR----NVTAELITRG-YSD----ADIAKLWGGNFLRAW 404 (417)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEECCBTTTCCBBT-BCSGGGHH----HHHHHHHHHT-CCH----HHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEcCCCCCCCCCCC-CCCHHHHH----HHHHHHHhcC-CCH----HHHHHHHHHHHHHHH
Confidence 44567788889999999999999994321 211 11122222 3334444444 554 559999999999998
Q ss_pred cC
Q 005679 379 KI 380 (683)
Q Consensus 379 ~l 380 (683)
+-
T Consensus 405 ~~ 406 (417)
T 3b40_A 405 GE 406 (417)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 59
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=90.85 E-value=1.4 Score=45.63 Aligned_cols=70 Identities=17% Similarity=0.087 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCCC---ccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHH
Q 005679 301 VQGMISSIKELLELAPTKKVMFSTDAYAS---PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (683)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~---Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rl 377 (683)
.+.+.+.+..+.+++|.+.|-+|||.-+. |...-...+ +-++..++.+ | ++. +.+++|+++|+.|+
T Consensus 239 l~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p~gl~d~s~-----~p~L~~~L~~-g-~se----~~i~ki~g~N~lRv 307 (318)
T 3neh_A 239 TEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVGK-----YQSFLETLEK-H-YTK----EEIEGFASRNFLNH 307 (318)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCBBTBSSGGG-----HHHHHHHHTT-T-SCH----HHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCCHHH-----HHHHHHHHHh-c-CCH----HHHHHHHhHhHHHH
Confidence 45677889999999999999999995432 221101122 2233444555 4 664 55999999999999
Q ss_pred hcCC
Q 005679 378 YKIN 381 (683)
Q Consensus 378 y~l~ 381 (683)
++-+
T Consensus 308 ~~~~ 311 (318)
T 3neh_A 308 LPKE 311 (318)
T ss_dssp CCC-
T ss_pred Hhhh
Confidence 8753
No 60
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=90.70 E-value=0.48 Score=51.21 Aligned_cols=69 Identities=14% Similarity=0.087 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCCC--ccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005679 301 VQGMISSIKELLELAPTKKVMFSTDAYAS--PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (683)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~--Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly 378 (683)
.+.+.+.+..+.+.+|.+.|-+|||.-+. |+. +.....+ -+++.+++++| ++. +.+++|+++|..|++
T Consensus 336 l~~~~~Hidhi~~~~G~dhVgiGsDfDG~~~~~g-l~dvs~~----p~L~~~Ll~rG-~se----~di~ki~g~N~lRvl 405 (417)
T 2rag_A 336 FDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDG-FEDITDL----PKITARLKAEG-YSD----ADIEAIWSGNVLRIV 405 (417)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCCTTTTCCBBT-BSSGGGT----HHHHHHHHHTT-CCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEEccCCCCCCCCCC-CCCHHHH----HHHHHHHHHcC-CCH----HHHHHHHHHHHHHHH
Confidence 44567788889999999999999995332 211 1111112 23334444444 554 559999999999998
Q ss_pred c
Q 005679 379 K 379 (683)
Q Consensus 379 ~ 379 (683)
+
T Consensus 406 ~ 406 (417)
T 2rag_A 406 D 406 (417)
T ss_dssp H
T ss_pred H
Confidence 6
No 61
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=90.48 E-value=1.6 Score=46.22 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccch---HHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHL---RAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 212 ~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L---~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
++..+..+++.+++.|.|+.+|.--.+. ...+.-..+ ..+++ ++|+.++++.|.+. .+...+.+...+|
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHaEd~~~---i~~~E~~ai~r~~~la~--~~~g~~lhi~HvSt---~~~v~~I~~A~~V 205 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHGETNDF---VMDRESNFAKIYEKLAK--HFPRLKIVMEHITT---KTLCELLKDYENL 205 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCSSC---GGGTTGGGHHHHHHHHH--HCTTSCEEECSCCS---HHHHHHHHHCTTE
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCchH---hHHHHHHHHHHHHHHHH--HcCCCcEEEEecCc---HHHHHHHHhcCCc
Confidence 4456677888999999999999864321 111222223 33454 59999999999974 3334443332788
Q ss_pred Eeccccc
Q 005679 289 YLDFGLA 295 (683)
Q Consensus 289 y~d~s~~ 295 (683)
+.+++..
T Consensus 206 taEv~ph 212 (359)
T 3pnu_A 206 YATITLH 212 (359)
T ss_dssp EEEECSG
T ss_pred eEEEech
Confidence 8888753
No 62
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=90.35 E-value=0.99 Score=47.89 Aligned_cols=71 Identities=13% Similarity=0.171 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCCCccch--hhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005679 301 VQGMISSIKELLELAPTKKVMFSTDAYASPETY--FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (683)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~--~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly 378 (683)
.+.+.+.+..+.+.+|.+.|.+|||.-+.+... +-....+. +++.++.+.| ++. +.+++|+++|..|++
T Consensus 264 ~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~gl~d~~~~p----~l~~~L~~~G-~se----~~i~ki~g~N~lRvl 334 (369)
T 1itu_A 264 LSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYP----DLIAELLRRN-WTE----AEVKGALADNLLRVF 334 (369)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHH----HHHHHHHHTT-CCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCCCCCHHHHH----HHHHHHHHcC-CCH----HHHHHHHhHhHHHHH
Confidence 456677888899999999999999953332110 01111222 2233334444 554 559999999999999
Q ss_pred cC
Q 005679 379 KI 380 (683)
Q Consensus 379 ~l 380 (683)
+-
T Consensus 335 ~~ 336 (369)
T 1itu_A 335 EA 336 (369)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 63
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=90.05 E-value=0.95 Score=48.13 Aligned_cols=83 Identities=14% Similarity=0.158 Sum_probs=58.8
Q ss_pred eeeeeeeeEEEEEeecccCCCCCcccCCCCCcccCCcccchHHHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcC-h
Q 005679 524 VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHT-V 602 (683)
Q Consensus 524 ~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~-~ 602 (683)
.+.+|+|.|+.++++. ++ .+... . .++++.+... +.=..+..|..-+|.|++.+|. +
T Consensus 11 ~~~~GiE~E~~~Vd~~--~g----~~~~~---------~------~~~l~~~~~~-~~~~~it~E~~~~qlEl~t~p~~~ 68 (372)
T 1r8g_A 11 PFTLGIELEMQVVNPP--GY----DLSQD---------S------SMLIDAVKNK-ITAGEVKHDITESMLELATDVCRD 68 (372)
T ss_dssp TTCEEEEEEEEEEETT--TT----EECSC---------C------HHHHTTTSSS-CSSSEEEECSSSSEEEEECCSBSS
T ss_pred CCceEEEEEEeeECCC--CC----CcCcc---------H------HHHHHhchhc-ccCCcccchhhccEEEecCCCCCC
Confidence 4699999999999871 12 11110 0 1232222110 0014789999999999999997 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeE
Q 005679 603 AAKAADNLIFTREVLRAVARKHGLLA 628 (683)
Q Consensus 603 ~l~aaD~~~~~k~~ik~vA~~~G~~A 628 (683)
.-++.+.+-..+..++++|.++|...
T Consensus 69 ~~e~~~~L~~~~~~~~~~a~~~g~~l 94 (372)
T 1r8g_A 69 INQAAGQFSAMQKVVLQAATDHHLEI 94 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEE
Confidence 77799999999999999999999765
No 64
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=87.71 E-value=1.4 Score=46.93 Aligned_cols=31 Identities=3% Similarity=0.193 Sum_probs=23.3
Q ss_pred HHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005679 347 VLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 347 ~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
++..+++.+.+++.+ +-+.+..|++++++++
T Consensus 336 ~~~~~~~~~~ls~~~----~l~~~T~n~A~~lgl~ 366 (426)
T 2z00_A 336 LYTELHLKRGFPLQR----LVELFTDGPRRVLGLP 366 (426)
T ss_dssp HHHHTHHHHCCCHHH----HHHHHTHHHHHHHTCC
T ss_pred HHHHHHHcCCCCHHH----HHHHHhhhHHHHhCCC
Confidence 344556667788755 6777889999999996
No 65
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=86.81 E-value=14 Score=38.43 Aligned_cols=138 Identities=15% Similarity=0.077 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEecc
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDF 292 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~ 292 (683)
+-.+..+++.|.++|+++.+|... ...++..++. ..+ .+.|+.+-..+++..++.. ++++..
T Consensus 206 ~e~l~~~~~~A~~~g~~v~~H~~~-----------~~~i~~~~~~--g~~---~i~H~~~~~~~~~~~~~~~--g~~~~~ 267 (403)
T 3gnh_A 206 YEEMKAVVDEAHMAGIKVAAHAHG-----------ASGIREAVRA--GVD---TIEHASLVDDEGIKLAVQK--GAYFSM 267 (403)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS-----------HHHHHHHHHT--TCS---EEEECTTCCHHHHHHHHHH--TCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHh--CCC---EEecCCcCCHHHHHHHHHC--CCEEEe
Confidence 334555788899999999999842 1124455552 222 4678754443433444432 455544
Q ss_pred ccccCC----------ccHH------H----HHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh
Q 005679 293 GLAIPK----------LSVQ------G----MISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC 352 (683)
Q Consensus 293 s~~~~~----------~~~~------g----~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v 352 (683)
+..... .+.. + ....++.+++.+. ++.+|||+...|.... .+.++ . ++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~~--~~e~~-----~---~~ 335 (403)
T 3gnh_A 268 DIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGV--KMVYGTDAGIYPHGDN--AKQFA-----V---MV 335 (403)
T ss_dssp CCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--EEECCCCBTTBCTTCG--GGHHH-----H---HH
T ss_pred eechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--eEEEecCCCCCCCCch--HHHHH-----H---HH
Confidence 321100 0000 0 1124556666543 8999999765553211 11221 1 12
Q ss_pred hcCCCChhHHHHHHHHHHHHHHHHHhcCCCCcc
Q 005679 353 IDEDLSVGEAIEVAKDIFALNAAQFYKINLGVK 385 (683)
Q Consensus 353 ~~g~l~~~ea~~~~~~I~~~NA~rly~l~~~~~ 385 (683)
+ ..++..+ +=+..-.|++++++++....
T Consensus 336 ~-~gl~~~~----al~~aT~~~A~~lg~~~~~G 363 (403)
T 3gnh_A 336 R-YGATPLQ----AIQSATLTAAEALGRSKDVG 363 (403)
T ss_dssp H-TTCCHHH----HHHHTTHHHHHHHTCTTTSS
T ss_pred H-cCCCHHH----HHHHHHHHHHHHhCCCCCce
Confidence 2 2467654 55667789999999975443
No 66
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=86.43 E-value=2 Score=46.28 Aligned_cols=164 Identities=12% Similarity=0.124 Sum_probs=82.8
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCC--------------CCCC-CCCCCcc-----chHHHHhhcCCCCceEEEecCCCCc
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd--------------~~~~-~~~~~p~-----~L~~l~~~~~~P~l~~vl~H~g~p~ 274 (683)
.+..+++.++++|+|+.+|..-.. .+.. ...+.|. .+..++.-.+.-+.++.+.|.+...
T Consensus 170 ~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~H~s~~~ 249 (448)
T 3hm7_A 170 TLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHVSSRK 249 (448)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCCCHH
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHH
Confidence 344567888899999999985311 0000 0001111 1222222101236889999987544
Q ss_pred HHHHHHHHhhC-CeeEeccccccCCccHH------------------HHHHHHHHHHhhCCCCcEEEecCCCCCccch--
Q 005679 275 SKEASYLAYVY-PQVYLDFGLAIPKLSVQ------------------GMISSIKELLELAPTKKVMFSTDAYASPETY-- 333 (683)
Q Consensus 275 ~~e~~~la~~~-pnVy~d~s~~~~~~~~~------------------g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~-- 333 (683)
..+....+... -+|+++++........+ .-...+.+.+..... .+++||..++....
T Consensus 250 ~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~--~~i~tD~~p~~~~~k~ 327 (448)
T 3hm7_A 250 VLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEI--DLISSDHSPSLPQMKT 327 (448)
T ss_dssp HHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCC--CEECCCBCCCCGGGGC
T ss_pred HHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCc--cEEEeCCCCCCHHHcc
Confidence 44444444332 36787776422111110 112344455544432 56899953332100
Q ss_pred ----h---hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCc
Q 005679 334 ----F---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (683)
Q Consensus 334 ----~---~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~~~~ 384 (683)
+ .+..-....+..++...+..+.+++.+ +-+.+..|++++|+++...
T Consensus 328 ~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~----~~~~~t~~~A~~~g~~~~~ 381 (448)
T 3hm7_A 328 GKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQ----IVQLLSTEPAKRFGLYPQK 381 (448)
T ss_dssp CSSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHH----HHHHHTHHHHHHHTCTTTS
T ss_pred cCCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHH----HHHHHhHHHHHHcCCCCCC
Confidence 0 000000012334455567677888755 6678889999999995433
No 67
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=81.94 E-value=11 Score=39.03 Aligned_cols=130 Identities=18% Similarity=0.227 Sum_probs=68.4
Q ss_pred HHHHHHhh-CCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCC--C---------cHHHHHHHHhhC
Q 005679 218 SSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY--P---------FSKEASYLAYVY 285 (683)
Q Consensus 218 ~l~e~a~e-~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~--p---------~~~e~~~la~~~ 285 (683)
.+++.+++ +|+||.+|.+.++. ....+...++. . . ++.|+.. + ...+....+. .
T Consensus 172 ~~~~~a~~~~g~~v~~H~~~~~~-------~~~~~~~~~~~--g---~-~~~H~~~~~~~~~~~~s~~~~~~~~~~~~-~ 237 (379)
T 2ics_A 172 LAKQIQQENQEIPLMVHIGSAPP-------HLDEILALMEK--G---D-VLTHCFNGKENGILDQATDKIKDFAWQAY-N 237 (379)
T ss_dssp HHHHHHHTTTTCCEEEEECSSSS-------CHHHHHHHCCT--T---C-EEESTTCCSTTSSEETTTTEECHHHHHHH-H
T ss_pred HHHHHHHHhcCCeEEEeCCCCcc-------hHHHHHHHhhc--C---C-eeeeccCCCccchhhccCHHHHHHHHHHH-H
Confidence 45788889 99999999974321 11122223331 1 2 4567632 1 0112232222 2
Q ss_pred CeeEeccccccCCccHHHHHHHHHHHHhhC-CCCcEEEecCCCC-----CccchhhhHHHHHHHHHHHHHhhhhcCCCCh
Q 005679 286 PQVYLDFGLAIPKLSVQGMISSIKELLELA-PTKKVMFSTDAYA-----SPETYFLGAKRAREVVFSVLRDTCIDEDLSV 359 (683)
Q Consensus 286 pnVy~d~s~~~~~~~~~g~~~~l~~~le~~-~~~kilfgSD~~~-----~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~ 359 (683)
.+++++++...+.... ..++++++.+ +.+ +++||+.. -|.. . +...+...++. .+++
T Consensus 238 ~g~~~~~~p~~~~~~~----~~~~~~~~~G~~~~--~l~TD~~~~~~~~~~~~------~----~~~~l~~~~~~-~ls~ 300 (379)
T 2ics_A 238 KGVVFDIGHGTDSFNF----HVAETALREGMKAA--SISTDIYIRNRENGPVY------D----LATTMEKLRVV-GYDW 300 (379)
T ss_dssp TTCEEECCCTTTSCCH----HHHHHHHHTTCCCS--BCCCCBCHHHHHSSSCC------C----HHHHHHHHHHH-TCCH
T ss_pred cCCEEEecCCCCCcCH----HHHHHHHHcCCCcc--eEeccCcccCCCCCcHh------H----HHHHHHHHHHc-CCCH
Confidence 4688887643222211 2456667764 544 88999531 0111 1 11222222322 4776
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCC
Q 005679 360 GEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 360 ~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
.+ +-+.+..|++|+|+++.
T Consensus 301 ~~----~~~~~T~n~A~~lgl~~ 319 (379)
T 2ics_A 301 PE----IIEKVTKAPAENFHLTQ 319 (379)
T ss_dssp HH----HHHTTTHHHHHHTTCTT
T ss_pred HH----HHHHHHHHHHHHhCCCC
Confidence 54 67788899999999964
No 68
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=77.98 E-value=5.7 Score=42.41 Aligned_cols=158 Identities=18% Similarity=0.126 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCC----CCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~----~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
+-.+..+++.|.++|+|+.+|+.-...... .....+ +..+.+. ...+-+.++.|+.+....++..++.. ++
T Consensus 199 ~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~~~~~--g~ 273 (447)
T 4f0r_A 199 DDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRP--LARLQRL-GLLSPRLVAAHMVHLNDAEVELAARH--GL 273 (447)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHc--CC
Confidence 334556788899999999999964310000 000111 2222222 34567788999965444555555543 33
Q ss_pred EeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh--hcCCCChhHHHHHH
Q 005679 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVA 366 (683)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~ea~~~~ 366 (683)
++..+...+.....+. .-++.+++.+ -++.+|||+...+.. ......++.. ..+.... ....++..+ +
T Consensus 274 ~~~~~p~~~~~~~~~~-~~~~~~~~~G--v~v~lgTD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~~----a 343 (447)
T 4f0r_A 274 STAHNPASNMKLASGI-SPVSKLMDAG--VAVGIGTDGAASNNK-LDMLAETRLA--ALLAKVGTLDPTSVPAAA----A 343 (447)
T ss_dssp EEEECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCGGGTCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHHH----H
T ss_pred EEEECchhhhhcCCCC-CcHHHHHHCC--CcEEEeCCCCcCCCC-CCHHHHHHHH--HHHhhhhccCCCCCCHHH----H
Confidence 3332211100000000 0244455443 278899996543211 0111112111 1112211 134566544 5
Q ss_pred HHHHHHHHHHHhcCCCCcc
Q 005679 367 KDIFALNAAQFYKINLGVK 385 (683)
Q Consensus 367 ~~I~~~NA~rly~l~~~~~ 385 (683)
-+..-.|++++++++...+
T Consensus 344 l~~~T~n~A~~lg~~~~~G 362 (447)
T 4f0r_A 344 IRMATLNGARALGIADKVG 362 (447)
T ss_dssp HHHHTHHHHHHTTCTTTSS
T ss_pred HHHHHHHHHHHhCCCCCcc
Confidence 5566789999999975443
No 69
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=77.37 E-value=7.1 Score=41.71 Aligned_cols=162 Identities=11% Similarity=0.035 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCC---CC-C--------CCCCCcc-----chHHHHhhcCCCCceEEEecCCCCcH
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDK---DL-D--------LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPFS 275 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~---~~-~--------~~~~~p~-----~L~~l~~~~~~P~l~~vl~H~g~p~~ 275 (683)
+..+..+++.++++|+|+++|..-... +. . ...+.|. .+...+.-.+..++++.+.|.+....
T Consensus 157 ~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~s~~~~ 236 (424)
T 3gri_A 157 ASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKES 236 (424)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHH
Confidence 334556778889999999999864310 00 0 0011121 11111111134578999999976544
Q ss_pred HHHHHHHhhC-CeeEecccccc------------------CCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc----
Q 005679 276 KEASYLAYVY-PQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET---- 332 (683)
Q Consensus 276 ~e~~~la~~~-pnVy~d~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~---- 332 (683)
.+....++.. -+|+.+++... |-.....-+..+.+.+..+..+ ++|||.-++...
T Consensus 237 ~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~--~igtDhap~~~~~k~~ 314 (424)
T 3gri_A 237 VRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTID--CIATDHAPHARDEKAQ 314 (424)
T ss_dssp HHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSC--EECCCBCCCCHHHHTS
T ss_pred HHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCce--EEEcCCCCCCHHHccC
Confidence 4444444332 25666554311 1110112233455555544333 689995333210
Q ss_pred -h---hhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcC
Q 005679 333 -Y---FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (683)
Q Consensus 333 -~---~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l 380 (683)
+ +.+..-....+..++..++.++.+++.+ +-+.+..|+++++++
T Consensus 315 ~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~ 362 (424)
T 3gri_A 315 PMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQ----LVDYLTIKPCETFNL 362 (424)
T ss_dssp CTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHH----HHHHHTHHHHHHTTC
T ss_pred CHhHCCCCCccccccHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCC
Confidence 0 0000000112334455667788898765 555667899999999
No 70
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=76.49 E-value=6.6 Score=41.86 Aligned_cols=162 Identities=12% Similarity=0.060 Sum_probs=81.3
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCC---CC--------CC-CCCCcc-----chHHHHhhcCCCCceEEEecCCCCcHH
Q 005679 214 YIFISSLEVAQFLDLPLQIHTGFGDK---DL--------DL-RLSNPL-----HLRAILEDKRFSKCRFVLLHASYPFSK 276 (683)
Q Consensus 214 ~~~~~l~e~a~e~glpvq~H~G~Gd~---~~--------~~-~~~~p~-----~L~~l~~~~~~P~l~~vl~H~g~p~~~ 276 (683)
..+..+++.++++|+|+.+|..-... +. .. ..+.|. .+...+.-.+..+.++.+.|++.....
T Consensus 159 ~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~H~s~~~~~ 238 (428)
T 3mpg_A 159 SMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKGSV 238 (428)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHH
Confidence 34556778899999999999964210 00 00 011121 111111111245788999999754333
Q ss_pred HHHHHHhhC-CeeEecccccc------------------CCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccch----
Q 005679 277 EASYLAYVY-PQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETY---- 333 (683)
Q Consensus 277 e~~~la~~~-pnVy~d~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~---- 333 (683)
+....+... -+|+++++... |-.....-+..+.+.+..+..+ +.+||..++....
T Consensus 239 ~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~--~i~tDh~p~~~~~k~~~ 316 (428)
T 3mpg_A 239 RVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTID--MIATDHAPHTAEEKAQG 316 (428)
T ss_dssp HHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSC--CBCCCBCCCCTTGGGSC
T ss_pred HHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCc--EEEcCCCCCCHHHcccC
Confidence 333333322 25666543210 1110111233555555554433 6899954432100
Q ss_pred -h---hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005679 334 -F---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 334 -~---~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
+ .+.--....+..++..++..+.+++.+ +-+.+..|++++||++
T Consensus 317 ~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~ 364 (428)
T 3mpg_A 317 IERAPFGITGFETAFPLLYTNLVKKGIITLEQ----LIQFLTEKPADTFGLE 364 (428)
T ss_dssp TTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHH----HHHTTTHHHHHHHTCS
T ss_pred HhhCCCCceehhhHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCCC
Confidence 0 000000012334455667778888755 5566678999999996
No 71
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=74.94 E-value=10 Score=41.35 Aligned_cols=161 Identities=16% Similarity=0.156 Sum_probs=79.3
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCC--------------CCCC-CCCCCcc-----chHHHHhhcCCCCceEEEecCCCCc
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd--------------~~~~-~~~~~p~-----~L~~l~~~~~~P~l~~vl~H~g~p~ 274 (683)
.+..+++.++++|+++.+|..-.. .+.. ...+.|. .+..++.-.+.-+.++.+.|.+...
T Consensus 188 ~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvst~~ 267 (473)
T 3e74_A 188 QFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPE 267 (473)
T ss_dssp HHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCCSHH
T ss_pred HHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHH
Confidence 444567778888999999975310 0000 0012221 1222222111235899999987544
Q ss_pred HHHHHHHHhh-CCeeEecccccc------------------CCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc---
Q 005679 275 SKEASYLAYV-YPQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET--- 332 (683)
Q Consensus 275 ~~e~~~la~~-~pnVy~d~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~--- 332 (683)
..+....++. -.+|+.+++... |-+....-+..+.+.++.+ ....++||..++...
T Consensus 268 ~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G--~~~~i~tDh~p~~~~~k~ 345 (473)
T 3e74_A 268 GVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNG--EIDCLVSDHSPCPPEMKA 345 (473)
T ss_dssp HHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTT--CCCEECCCBCCCCTTTTC
T ss_pred HHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCC--CCcEEEeCCCCCCHHHcc
Confidence 3333333332 246777665421 1110111223444444433 234689996443311
Q ss_pred --h---hhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005679 333 --Y---FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 333 --~---~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
+ +.+.--....+..++.+.+.++.+++.+ +-+.+..|++++++++
T Consensus 346 ~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~ 395 (473)
T 3e74_A 346 GNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPM----FGKLMATNAADIFGLQ 395 (473)
T ss_dssp SCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHH----HHHHHTHHHHHHTTCT
T ss_pred cChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCCC
Confidence 0 0000000112333344567778898755 5556678999999996
No 72
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=73.08 E-value=27 Score=39.37 Aligned_cols=135 Identities=14% Similarity=-0.026 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEecc
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDF 292 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~ 292 (683)
+..+...++.+.++|+||.+|.... ....+..+.+. - +.. .|+.... .++...... .+|+.+
T Consensus 201 d~~l~~~l~~A~~~g~pV~~Ha~~~---------~~~~L~~~~~a--G--v~~--~H~~~~~-eea~e~l~~--G~~i~i 262 (608)
T 3nqb_A 201 DPRMSGIVQAGLAAEKLVCGHARGL---------KNADLNAFMAA--G--VSS--DHELVSG-EDLMAKLRA--GLTIEL 262 (608)
T ss_dssp CHHHHHHHHHHHHHTCEEEECCTTC---------CHHHHHHHHHT--T--CCE--ECCCCSH-HHHHHHHHT--TCEEEE
T ss_pred cHHHHHHHHHHHHcCCEEEEcCCCC---------CHHHHHHHHHc--C--CCe--eeccCCH-HHHHHHHHC--CCEEEE
Confidence 4445666788999999999997521 12234555552 2 222 6875533 555555442 666665
Q ss_pred ccccCCccHHHHHHHHHHHHh--hCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHH
Q 005679 293 GLAIPKLSVQGMISSIKELLE--LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIF 370 (683)
Q Consensus 293 s~~~~~~~~~g~~~~l~~~le--~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~ 370 (683)
.. ... + . ...+..++. ..+..+++++||+. .|...+ ... .+...+...++. .++..+ +-+..
T Consensus 263 ~g-s~~--~-~-~~~l~~~i~~~~~~g~~v~lgTD~~-~p~~~~-~~g----~l~~~v~~~~~~-Gls~~e----al~~a 326 (608)
T 3nqb_A 263 RG-SHD--H-L-LPEFVAALNTLGHLPQTVTLCTDDV-FPDDLL-QGG----GLDDVVRRLVRY-GLKPEW----ALRAA 326 (608)
T ss_dssp ES-SSG--G-G-HHHHHHHHHHHTSCCTTEEEECBSC-CHHHHH-HTC----SHHHHHHHHHHT-TCCHHH----HHHHH
T ss_pred ec-ccc--c-c-HHHHHHHHHhHhhcCceEEEecCCC-CCcchh-hhc----chHHHHHHHHHc-CCCHHH----HHHHH
Confidence 52 111 1 1 123333343 34569999999953 232111 100 111222333333 466544 67778
Q ss_pred HHHHHHHhcCC
Q 005679 371 ALNAAQFYKIN 381 (683)
Q Consensus 371 ~~NA~rly~l~ 381 (683)
..|++++|+++
T Consensus 327 T~n~A~~lgl~ 337 (608)
T 3nqb_A 327 TLNAAQRLGRS 337 (608)
T ss_dssp THHHHHHHTCT
T ss_pred HHHHHHHcCCC
Confidence 89999999994
No 73
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=71.72 E-value=19 Score=39.15 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=35.0
Q ss_pred CcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhh-cCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005679 318 KKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 318 ~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~-~g~l~~~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
...++|||+........++. --.+..++..+++ .+.+++.+ +-..+-.|++++++++.
T Consensus 358 ~~~~~gsD~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~----~~~~~t~~~a~~~g~~~ 416 (480)
T 3gip_A 358 PCCMVGSDGLPNDARPHPRL---WGSFTRVLGRYVREARLMTLEQ----AVARMTALPARVFGFAE 416 (480)
T ss_dssp TTEEECCCCCTTCSSCCTHH---HHHHHHHHHCCCCCTCSSCHHH----HHHHHTHHHHHHHTCTT
T ss_pred CCeEEecCCcccCCCCChhh---hhhHHHHHHHHhhhcCCCCHHH----HHHHHHHHHHHHcCCCC
Confidence 45778999744322111111 1234456677887 47788765 44556678889999953
No 74
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=71.55 E-value=31 Score=36.09 Aligned_cols=137 Identities=11% Similarity=0.001 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEecc
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDF 292 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~ 292 (683)
+-.+..+++.|.++|++|.+|.. + ...+...++.+. + .+.|+.......+..++.. ++++..
T Consensus 211 ~e~l~~~~~~A~~~g~~v~~H~~-~----------~~~i~~~l~~g~--~---~i~H~~~~~~~~~~~l~~~--gv~~~p 272 (423)
T 3feq_A 211 EDEIRAIVDEAEAANTYVMAHAY-T----------GRAIARAVRCGV--R---TIEHGNLVDEAAAKLMHEH--GAFVVP 272 (423)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEE-E----------HHHHHHHHHHTC--C---EEEEEEECCHHHHHHHHHH--TCEEEC
T ss_pred HHHHHHHHHHHHHCCCeEEEEeC-C----------hHHHHHHHHcCC--C---EEeccCcCCHHHHHHHHHC--CCcccc
Confidence 33455678889999999999986 2 112444444321 1 3456633222223333322 344422
Q ss_pred c--------------cccCCc-cHH-----HHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh
Q 005679 293 G--------------LAIPKL-SVQ-----GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC 352 (683)
Q Consensus 293 s--------------~~~~~~-~~~-----g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v 352 (683)
. .+.|.. ... .....++.+++.+. ++.+|||+...|... ....++ +.
T Consensus 273 t~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv--~v~~gTD~~~~~~~~--~~~e~~---------~~ 339 (423)
T 3feq_A 273 TLVTYDALAKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGV--KMGFGSDLLGEMHAF--QSGEFR---------IR 339 (423)
T ss_dssp CTHHHHHHHHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTC--CBCCCCCCCGGGGGG--TTHHHH---------HH
T ss_pred chHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEECCCCCCCCCcc--hHHHHH---------HH
Confidence 1 011110 000 12235666666553 788999976434221 111111 11
Q ss_pred hcCCCChhHHHHHHHHHHHHHHHHHhcCCCCcc
Q 005679 353 IDEDLSVGEAIEVAKDIFALNAAQFYKINLGVK 385 (683)
Q Consensus 353 ~~g~l~~~ea~~~~~~I~~~NA~rly~l~~~~~ 385 (683)
.++ ++..+ +=+..-.|++++++++....
T Consensus 340 ~~~-ls~~e----al~~aT~~~A~~lg~~~~~G 367 (423)
T 3feq_A 340 AEV-LGNLE----ALRSATTVAAEIVNMQGQLG 367 (423)
T ss_dssp HTT-SCHHH----HHHTTTHHHHHHTTCBTTBS
T ss_pred Hhh-CCHHH----HHHHHHHHHHHHhCCCCCce
Confidence 223 77655 44556789999999975433
No 75
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=71.03 E-value=90 Score=33.55 Aligned_cols=158 Identities=15% Similarity=0.121 Sum_probs=73.7
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCC-----CC-CCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCC
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLD-----LR-LSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYP 286 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~-----~~-~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~p 286 (683)
+-.+..+.+.|.++|+++++|.+-...... .. ...| ++ .+.+-...+-+.++.|+-+--..+...++..--
T Consensus 242 ~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~--~~-~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~ 318 (476)
T 4aql_A 242 ETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNY--TS-VYDKNNLLTNKTVMAHGCYLSAEELNVFHERGA 318 (476)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSH--HH-HHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCH--HH-HHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCC
Confidence 345566788999999999999964311000 00 0122 22 222113345578899997655555555554322
Q ss_pred eeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHH--HHHHHh-hhhcCCCChhHHH
Q 005679 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVV--FSVLRD-TCIDEDLSVGEAI 363 (683)
Q Consensus 287 nVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l--~~~l~~-~v~~g~l~~~ea~ 363 (683)
.|-..... +.....|. .-++++++.+ -++.+|||+.+.... .-...+|... .+.+.. ......++..+
T Consensus 319 ~v~~~P~s--n~~l~~g~-~p~~~~~~~G--v~v~lGtD~~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~l~~~~-- 389 (476)
T 4aql_A 319 SIAHCPNS--NLSLSSGF-LNVLEVLKHE--VKIGLGTDVAGGYSY--SMLDAIRRAVMVSNILLINKVNEKSLTLKE-- 389 (476)
T ss_dssp EEEECHHH--HHHTTCCC-CCHHHHHHTT--CEEEECCCTTTSSCC--CHHHHHHHHHHHHHHHHHTTSSSSCCCHHH--
T ss_pred EEEECchh--hhhhCcch-HHHHHHHHCC--CcEEEeCCCCCCCCC--CHHHHHHHHHHHHhhhhcccCCCCcCCHHH--
Confidence 22111100 00000000 0234445543 377899996532111 1112222221 111111 01224566544
Q ss_pred HHHHHHHHHHHHHHhcCCCCc
Q 005679 364 EVAKDIFALNAAQFYKINLGV 384 (683)
Q Consensus 364 ~~~~~I~~~NA~rly~l~~~~ 384 (683)
+=+..-.|+++.++++...
T Consensus 390 --al~~aT~~~A~~lgl~~~~ 408 (476)
T 4aql_A 390 --VFRLATLGGSQALGLDGEI 408 (476)
T ss_dssp --HHHHHTHHHHHHTTCTTTS
T ss_pred --HHHHHHHHHHHHhCCCCCc
Confidence 4445557888899987543
No 76
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=69.37 E-value=13 Score=39.62 Aligned_cols=156 Identities=16% Similarity=0.124 Sum_probs=74.0
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCC----CCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEe
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd~~~~----~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~ 290 (683)
.+..+++.|.++|+++.+|..-...... .....+ ++.+.+. ...+-+.++.|+.+.-..++..++.. ++.+
T Consensus 203 ~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~l~~~--g~~v 277 (451)
T 4dyk_A 203 KLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERP--LARLHRL-GLLGPRFQAVHMTQVDNDDLAMLVET--NSSV 277 (451)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCCCCHHHHHHHHHH--TCEE
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHC-CCCCCCeEEEECCCCCHHHHHHHHHc--CCEE
Confidence 4555778899999999999964310000 000111 2222221 33466788999976554555555543 2333
Q ss_pred ccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh--hcCCCChhHHHHHHHH
Q 005679 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAKD 368 (683)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~ea~~~~~~ 368 (683)
..+...+.....+. .-++++++.+ -++.+|||+...+.. ......++.. ..+.... ....++..+ +=+
T Consensus 278 ~~~p~s~~~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----al~ 347 (451)
T 4dyk_A 278 IHCPESNLKLASGF-CPVEKLWQAG--VNVAIGTDGAASNND-LDLLGETRTA--ALLAKAVYGQATALDAHR----ALR 347 (451)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHHT--CCEEECCCCGGGSSC-CCHHHHHHHH--HHHHHHHHTCTTSSCHHH----HHH
T ss_pred EEChhhhhhccCCc-ccHHHHHhCC--CeEEEECCCCccCCC-CCHHHHHHHH--HHHhhhhcCCCCCCCHHH----HHH
Confidence 22111000000000 0244555544 278899996532110 1111222211 1111111 123566544 444
Q ss_pred HHHHHHHHHhcCCCCcc
Q 005679 369 IFALNAAQFYKINLGVK 385 (683)
Q Consensus 369 I~~~NA~rly~l~~~~~ 385 (683)
..-.|+++.++++...+
T Consensus 348 ~~T~~~A~~lg~~~~~G 364 (451)
T 4dyk_A 348 MATLNGARALGLERLIG 364 (451)
T ss_dssp HHTHHHHHHHTCTTTSS
T ss_pred HHHHHHHHHcCCCCCCc
Confidence 55678999999975433
No 77
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=67.35 E-value=48 Score=34.63 Aligned_cols=137 Identities=11% Similarity=0.058 Sum_probs=70.3
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEeccc
Q 005679 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFG 293 (683)
Q Consensus 214 ~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~s 293 (683)
..+..+++.|.++|+++.+|+. ++ ..+..+++.+ . -.+.|+.+-....+..++. .++++.+.
T Consensus 216 ~~l~~~~~~A~~~g~~v~~H~~-~~----------~~i~~~~~~g--~---~~i~H~~~~~~~~i~~l~~--~gv~v~p~ 277 (418)
T 2qs8_A 216 EEVDAVVSAAKDYGMWVAVHAH-GA----------EGMKRAIKAG--V---DSIEHGTFMDLEAMDLMIE--NGTYYVPT 277 (418)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEC-SH----------HHHHHHHHHT--C---SEEEECTTCCHHHHHHHHH--HTCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEEEEC-CH----------HHHHHHHHcC--C---CEEEECCCCCHHHHHHHHH--CCCEEeee
Confidence 3455567888999999999995 21 1244444422 1 2467875433333333333 23544433
Q ss_pred cc-------------cCCcc--HH------HHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh
Q 005679 294 LA-------------IPKLS--VQ------GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC 352 (683)
Q Consensus 294 ~~-------------~~~~~--~~------g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v 352 (683)
.. ++... .. .....++.+++.+. ++.+|||+...|.... ....+ .++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~~--~~e~~--------~~~ 345 (418)
T 2qs8_A 278 ISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGV--KIAFGTDAGVQKHGTN--WKEFV--------YMV 345 (418)
T ss_dssp HHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTC--CBCCCCCBTTBCTTCT--THHHH--------HHH
T ss_pred echHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEeCCCCcCCcchH--HHHHH--------HHH
Confidence 10 11000 00 01124666777543 6889999754442111 11111 122
Q ss_pred hcCCCChhHHHHHHHHHHHHHHHHHhcCCCCcc
Q 005679 353 IDEDLSVGEAIEVAKDIFALNAAQFYKINLGVK 385 (683)
Q Consensus 353 ~~g~l~~~ea~~~~~~I~~~NA~rly~l~~~~~ 385 (683)
+. .++..+ +-+..-.|++++++++....
T Consensus 346 ~~-gls~~e----al~~~T~n~A~~lg~~~~~G 373 (418)
T 2qs8_A 346 EN-GMPAMK----AIQSATMETAKLLRIEDKLG 373 (418)
T ss_dssp HT-TCCHHH----HHHHTTHHHHHHTTCTTTSS
T ss_pred Hc-CCCHHH----HHHHHHHHHHHHhCCCCCCc
Confidence 22 577654 44556789999999975433
No 78
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=64.50 E-value=87 Score=33.45 Aligned_cols=155 Identities=16% Similarity=0.106 Sum_probs=71.8
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCC----CCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEe
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd~~~----~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~ 290 (683)
.+..+++.|.++|+++.+|...+.... ......| ++.+.+. ...+-+.++.|+.+--..++..++.. ++.+
T Consensus 210 ~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~l~~~~i~~l~~~--g~~v 284 (472)
T 4dzh_A 210 NFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRP--LARLDRL-GLVNDRLIAVHMTQLTEAEIHLCAER--GVSV 284 (472)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHH--TCEE
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHHc--CCEE
Confidence 344567888999999999986431000 0000112 2222222 23356788999965544555555543 2222
Q ss_pred ccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCC-ccchhhhHHHHHHHHHHHHHhhh--hcCCCChhHHHHHHH
Q 005679 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAK 367 (683)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-Pe~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~ea~~~~~ 367 (683)
......+.....+. .-++.+++.+ -++.+|||+... +... ....++... .+.... ....++..+ +=
T Consensus 285 ~~~p~s~~~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~--~~~~~~~a~--~~~~~~~~~~~~l~~~~----al 353 (472)
T 4dzh_A 285 VHCPESNLKLASGF-CPACALQRAS--VNLAIGTDGCASNNDLD--MFSENRTAA--ILAKAVANDATALDAAT----TL 353 (472)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCTTSSCCCC--HHHHHHHHH--HHHHHHHTCTTSSCHHH----HH
T ss_pred EEChHHHHhcCCCC-ccHHHHHHCC--CCEEEECCCCcCCCCCC--HHHHHHHHH--HHhhhhcCCCCcCCHHH----HH
Confidence 21110000000000 0244455543 378899997532 1111 111222111 111111 123466544 33
Q ss_pred HHHHHHHHHHhcCCCCcc
Q 005679 368 DIFALNAAQFYKINLGVK 385 (683)
Q Consensus 368 ~I~~~NA~rly~l~~~~~ 385 (683)
+..-.|+++.+|++...+
T Consensus 354 ~~~T~~~A~~lgl~~~~G 371 (472)
T 4dzh_A 354 RAATLGGARALGFGDRIG 371 (472)
T ss_dssp HHHTHHHHHHTTCTTTSS
T ss_pred HHHHHHHHHHcCCCCCCc
Confidence 445568999999875443
No 79
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=63.90 E-value=46 Score=35.66 Aligned_cols=161 Identities=14% Similarity=0.095 Sum_probs=80.1
Q ss_pred HHHHHHHHhhCCCcEEEecCCC--------------CCCCCC-CCCCcc-----chHHHHhhcCCCCceEEEecCCCCcH
Q 005679 216 FISSLEVAQFLDLPLQIHTGFG--------------DKDLDL-RLSNPL-----HLRAILEDKRFSKCRFVLLHASYPFS 275 (683)
Q Consensus 216 ~~~l~e~a~e~glpvq~H~G~G--------------d~~~~~-~~~~p~-----~L~~l~~~~~~P~l~~vl~H~g~p~~ 275 (683)
+..+++.++++|+++.+|.-.. ..+... ..+.|. .+...+.-.+..+.++.+.|.+....
T Consensus 166 l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~s~~~~ 245 (461)
T 3sfw_A 166 LFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHVSCADA 245 (461)
T ss_dssp HHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSCCSHHH
T ss_pred HHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEecCcHHH
Confidence 3445677888899999996421 000000 001221 12222221124488999999975443
Q ss_pred HHHHHHHhhC-CeeEecccccc---------------------CCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCc-cc
Q 005679 276 KEASYLAYVY-PQVYLDFGLAI---------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ET 332 (683)
Q Consensus 276 ~e~~~la~~~-pnVy~d~s~~~---------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-e~ 332 (683)
.+....++.. .+|+.+++... |-+....-+..+.+.+..+ ...++|||..++. +.
T Consensus 246 l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G--~~~~i~sD~~p~~~~~ 323 (461)
T 3sfw_A 246 VRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNG--ILQTVGSDHCPFNFSG 323 (461)
T ss_dssp HHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTT--SSCEECCCBCCCCTTT
T ss_pred HHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcC--CceEEECCCCCCCchh
Confidence 3344444332 35655554310 1110011223445555433 3357899965443 10
Q ss_pred --------hh---hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005679 333 --------YF---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 333 --------~~---~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
++ .+.-.....+..++...+..+.+++.+ +-..+..|++++++++.
T Consensus 324 ~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~~ 380 (461)
T 3sfw_A 324 QKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQ----FVDITSTKVAKLFGMFP 380 (461)
T ss_dssp TGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHH----HHHHHTHHHHHHHTCTT
T ss_pred hhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHcCCCC
Confidence 00 000001112334455677788898765 56667789999999954
No 80
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=63.28 E-value=16 Score=32.65 Aligned_cols=89 Identities=17% Similarity=0.120 Sum_probs=62.2
Q ss_pred HHHHHHHHHhcCCeeeeeeeeEEEEEeecccCCCCCcccCCCCCcccCCcccchHHHHHHHHHHHHhCCCceeEee-c--
Q 005679 511 RKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLH-A-- 587 (683)
Q Consensus 511 ~r~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h-~-- 587 (683)
+++++.++ +-|..+..-.++||++.=+. .+-++.+...+.+.|..|+..- -
T Consensus 22 ~~Vl~~L~-e~Gddl~~~r~IEH~~~F~d-------------------------e~~~e~~a~~~~~~Gy~v~~~~~~e~ 75 (132)
T 1nxi_A 22 RDIIQALL-EDGSDPDALYEIEHHLFAED-------------------------FDKLEKAAVEAFKMGFEVLEAEETED 75 (132)
T ss_dssp HHHHHHHH-HHTCCTTSCEEEEEEEEESC-------------------------HHHHHHHHHHHHHHTCCCBCCCCBCC
T ss_pred HHHHHHHH-hCCCCcCCCeEEEEEEEeCC-------------------------HHHHHHHHHHHHHCCCEEEecccccC
Confidence 56777787 46999999999999997541 2456667777788999886322 2
Q ss_pred cCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHcCC
Q 005679 588 EAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGL 626 (683)
Q Consensus 588 E~~pGQ~Ei~l~~~~~l~aaD~~~~~k~~ik~vA~~~G~ 626 (683)
|-|-..|++.+.....+...+-.-...++++ +|+++|-
T Consensus 76 e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~-lA~~~~G 113 (132)
T 1nxi_A 76 EDGNKLLCFDATMQSALDAKLIDEQVEKLVN-LAEKFDI 113 (132)
T ss_dssp SSCSSBEEEEEEEEECSCHHHHHHHHHHHHH-HHHHHTC
T ss_pred CCCceeEEEEEEEeccCCHHHHHHHHHHHHH-HHHHhCc
Confidence 3333479999988877765555445555554 8888765
No 81
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=62.28 E-value=1.1e+02 Score=32.32 Aligned_cols=155 Identities=16% Similarity=0.098 Sum_probs=73.3
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCC----CCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEe
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd~~~~----~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~ 290 (683)
.+..+++.|.++|+++.+|+........ ..-..+ +..+.+. ...+-+.++.|+.+.-..++..++.. ++++
T Consensus 228 ~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~l~~~~~~~H~~~~~~~~~~~l~~~--g~~v 302 (468)
T 3lnp_A 228 PLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRP--TQRLADI-GFLNERVSCVHMTQVDDGDIKILQKT--GASI 302 (468)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCSCCHHHHHHHHHH--CCEE
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHhc--CCEE
Confidence 3445678889999999999964210000 000111 2222221 33466788999965444455555543 3333
Q ss_pred ccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh--hcCCCChhHHHHHHHH
Q 005679 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAKD 368 (683)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~ea~~~~~~ 368 (683)
......+.....+. ..++.+++.+ -++.+|||+...... .......+.. ..+.... ....++..+ +=+
T Consensus 303 ~~~p~s~~~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~~----al~ 372 (468)
T 3lnp_A 303 IHCPESNLKLASGF-CPIAKLSAAN--IPLAIGTDGAASNND-LDMFSETKTA--ALLAKGVSQDASAIPAIE----ALT 372 (468)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHTT--CCEEECCCCTTSSCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHHH----HHH
T ss_pred EEChhhhhhcCCCC-CCHHHHHHCC--CeEEEECCCCcCCCC-CCHHHHHHHH--HHHhhhccCCCCcCCHHH----HHH
Confidence 22211000000000 0244555543 378899997543110 0111112111 1122222 134567644 444
Q ss_pred HHHHHHHHHhcCCCCc
Q 005679 369 IFALNAAQFYKINLGV 384 (683)
Q Consensus 369 I~~~NA~rly~l~~~~ 384 (683)
.+-.|++++++++...
T Consensus 373 ~~T~~~A~~lg~~~~~ 388 (468)
T 3lnp_A 373 MATLGGARALGIDDIT 388 (468)
T ss_dssp HHTHHHHHHTTCTTTS
T ss_pred HHHHHHHHHhCCCCCc
Confidence 5567899999997543
No 82
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=62.08 E-value=78 Score=32.76 Aligned_cols=132 Identities=14% Similarity=0.067 Sum_probs=68.4
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEecccc
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGL 294 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~s~ 294 (683)
.+..+++.|.++|+++.+|..-. ..+..+++.+ . -.+.|+.+.. .+...++.. .++++-+..
T Consensus 207 ~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~~~~g--~---~~i~H~~~~~-~~~i~~~~~-~g~~v~~~~ 268 (408)
T 3be7_A 207 EMKAIVDEAHNHGMKVAAHAHGL-----------IGIKAAIKAG--V---DSVEHASFID-DETIDMAIK-NNTVLSMDI 268 (408)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSH-----------HHHHHHHHHT--C---SEEEECTTCC-HHHHHHHHH-TTCEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcC--C---CEEEECCCCC-HHHHHHHHH-CCCEEeeee
Confidence 34556788899999999998521 1244444432 1 2567885443 334444433 234443221
Q ss_pred cc------C----CccHH------HH----HHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhc
Q 005679 295 AI------P----KLSVQ------GM----ISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCID 354 (683)
Q Consensus 295 ~~------~----~~~~~------g~----~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~ 354 (683)
.. . ..++. +. ...++.+++.+. ++++|||+.+.|.... ....+. +++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~~~~gTD~~~~p~~~~--~~~~~~--------~~~~ 336 (408)
T 3be7_A 269 FVSDYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGA--IITFGTDAGIFDHGDN--AKQFAY--------MVEW 336 (408)
T ss_dssp STHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--CEECCCCBTTBCTTCG--GGHHHH--------HHHT
T ss_pred cHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEECCCCCCCCchH--HHHHHH--------HHHc
Confidence 10 0 01110 10 123555555442 6889999765443211 111111 2223
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005679 355 EDLSVGEAIEVAKDIFALNAAQFYKIN 381 (683)
Q Consensus 355 g~l~~~ea~~~~~~I~~~NA~rly~l~ 381 (683)
.++..+ +-+..-.|++++++++
T Consensus 337 -gls~~~----al~~~T~n~A~~lgl~ 358 (408)
T 3be7_A 337 -GMTPLE----AIQASTIKTATLFGIE 358 (408)
T ss_dssp -TCCHHH----HHHTTTHHHHHHHTCS
T ss_pred -CCCHHH----HHHHHHHHHHHHhCCC
Confidence 477654 4556678999999997
No 83
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=59.14 E-value=1.2e+02 Score=31.66 Aligned_cols=137 Identities=15% Similarity=0.073 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEecc
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDF 292 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~ 292 (683)
+-.+..+++.|.++|++|.+|.. + ...+...++.+. + .+.|+.+-. .+...++... ++++..
T Consensus 214 ~e~l~~~~~~A~~~g~~v~~H~~-~----------~~~i~~al~~G~--~---~i~H~~~~~-~~~~~~~~~~-gv~~~p 275 (426)
T 2r8c_A 214 EDEIRAIVAEAQGRGTYVLAHAY-T----------PAAIARAVRCGV--R---TIEHGNLID-DETARLVAEH-GAYVVP 275 (426)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC-S----------HHHHHHHHHTTC--S---EEEECTTCC-HHHHHHHHHT-TCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEEeC-C----------hHHHHHHHHcCC--C---EEecCCcCC-HHHHHHHHHc-CCeEee
Confidence 33455678889999999999996 2 122444555221 1 356775433 3333333222 444422
Q ss_pred cccc--C--------CccHH----------HHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh
Q 005679 293 GLAI--P--------KLSVQ----------GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC 352 (683)
Q Consensus 293 s~~~--~--------~~~~~----------g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v 352 (683)
.... + ...+. .....++.+++.+ -++.+|||+...|... . .++ +. ..
T Consensus 276 t~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G--v~v~lgTD~~~~~~~~--~---~~e-~~-----~~ 342 (426)
T 2r8c_A 276 TLVTYDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAG--VKMGFGTDLLGEAQRL--Q---SDE-FR-----IL 342 (426)
T ss_dssp CTHHHHHHHHHTTTTTCCHHHHTTSTTTGGGHHHHHHHHHHTT--CEECCCCCCCGGGGGG--T---THH-HH-----HH
T ss_pred chHHHHHHhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcC--CeEEEecCCCCCCCcc--h---HHH-HH-----HH
Confidence 1000 0 00010 1223456666643 3778999975433221 1 111 11 11
Q ss_pred hcCCCChhHHHHHHHHHHHHHHHHHhcCCCCcc
Q 005679 353 IDEDLSVGEAIEVAKDIFALNAAQFYKINLGVK 385 (683)
Q Consensus 353 ~~g~l~~~ea~~~~~~I~~~NA~rly~l~~~~~ 385 (683)
.++ ++..+ +=+..-.|++++++++....
T Consensus 343 ~~~-l~~~e----al~~aT~~~A~~lg~~~~~G 370 (426)
T 2r8c_A 343 AEV-LSPAE----VIASATIVSAEVLGMQDKLG 370 (426)
T ss_dssp TTT-SCHHH----HHHHTTHHHHHHTTCTTTSS
T ss_pred Hhc-CCHHH----HHHHHHHHHHHHhCCCCCCc
Confidence 223 77654 44556789999999975443
No 84
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=58.60 E-value=37 Score=36.99 Aligned_cols=112 Identities=16% Similarity=0.097 Sum_probs=59.8
Q ss_pred CCceEEEecCCCCcHHHHHHHHhhC-CeeEeccccccCC----------------------ccHHHHHHHHHHHHhhCCC
Q 005679 261 SKCRFVLLHASYPFSKEASYLAYVY-PQVYLDFGLAIPK----------------------LSVQGMISSIKELLELAPT 317 (683)
Q Consensus 261 P~l~~vl~H~g~p~~~e~~~la~~~-pnVy~d~s~~~~~----------------------~~~~g~~~~l~~~le~~~~ 317 (683)
-+.++.+.|.+.....++...++.. -+|+.+++..... +....-+..|.+.+..+..
T Consensus 228 ~g~~lhi~HvSt~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~i 307 (490)
T 3dc8_A 228 AGCPVYIVHTSCEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSL 307 (490)
T ss_dssp HTCCEEESSCCSHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSS
T ss_pred hCCcEEEEeCCCHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCc
Confidence 3689999999754433444444332 3677666541100 0000112345555554433
Q ss_pred CcEEEecCCCCCccchhhhHHH---------------HHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005679 318 KKVMFSTDAYASPETYFLGAKR---------------AREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 318 ~kilfgSD~~~~Pe~~~~~~~~---------------~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
+ +++||.-++.. ..+. ....+.-++...|..+.+++.+ +-..+..|++++|+++.
T Consensus 308 d--~i~sDh~p~~~----~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~----~~~~~t~~~A~~~gl~~ 377 (490)
T 3dc8_A 308 Q--VVATDHCAFTT----EQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNE----FVAVTSTNIAKILNIYP 377 (490)
T ss_dssp C--CCBCCBCCCCH----HHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHH----HHHHHTHHHHHHTTCTT
T ss_pred e--EEECCCCCCCH----HHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHH----HHHHHHHHHHHHhCCCC
Confidence 3 58999533321 1110 0112333455567888899865 55566789999999953
No 85
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=53.86 E-value=28 Score=38.69 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=25.0
Q ss_pred HHHHHHhhhhcCCC-ChhHHHHHHHHHHHHHHHHHhcCCC
Q 005679 344 VFSVLRDTCIDEDL-SVGEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 344 l~~~l~~~v~~g~l-~~~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
+..++...|..+.+ ++.+ +-..+-.|++++|++..
T Consensus 400 l~~ll~~~v~~~~l~~~~~----~~~~~t~~~A~~lgl~~ 435 (559)
T 2fty_A 400 MPLLYDYGYLRGNLTSMMK----LVEIQCTNPAKVYGMYP 435 (559)
T ss_dssp HHHHHHHTTTTTSSSCHHH----HHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCCCCHHH----HHHHHhHHHHHHhCCCC
Confidence 33445667778888 8755 55667789999999953
No 86
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=53.23 E-value=48 Score=34.55 Aligned_cols=136 Identities=16% Similarity=0.148 Sum_probs=67.5
Q ss_pred HHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEeccccccCCcc
Q 005679 221 EVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLS 300 (683)
Q Consensus 221 e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~ 300 (683)
..+.+.|+|+.+|+.... .....-.+++ ++ ++++.+.|+...+. .+..++..--.|-+.....++...
T Consensus 214 ~~~~~~~~~v~iHa~~~~--------~i~~~~~~~~--~~-g~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~~ 281 (396)
T 3ooq_A 214 EMVLRKKIPARMHAHRAD--------DILTAIRIAE--EF-GFNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTKL 281 (396)
T ss_dssp HHHHTTSSCEEEEECSHH--------HHHHHHHHHH--HH-TCCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCSG
T ss_pred HHHHcCCCcEEEEECchh--------HHHHHHHHHH--Hc-CCCEEEecCchHHH-HHHHHHHCCCCEEECcccccccch
Confidence 334588999999996421 0111222333 12 45788999864332 334444432222222221111100
Q ss_pred H--HHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005679 301 V--QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (683)
Q Consensus 301 ~--~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly 378 (683)
. ......++.+++.+ -++.+|||++..|...+ ...+ .+ .+ +..++..+ +-+..-.|+++++
T Consensus 282 ~~~~~~~~~~~~l~~~G--v~v~lgtD~~~~~~~~l------~~~~-~~---~~-~~gl~~~~----al~~~T~n~A~~l 344 (396)
T 3ooq_A 282 ELKDLTMETIAKLLKDG--VLIALMCDHPVIPLEFA------TVQA-AT---AM-RYGAKEED----LLKILTVNPAKIL 344 (396)
T ss_dssp GGTTCCTTHHHHHHHTT--CCEEECCTTTTSCGGGH------HHHH-HH---GG-GGTCCHHH----HHHTTTHHHHHHT
T ss_pred hHHhhhhHHHHHHHHCC--CEEEEEcCCCccCccHH------HHHH-HH---HH-HcCCCHHH----HHHHHHHHHHHHh
Confidence 0 00011455555543 47889999766553211 1111 11 12 22466544 5566778999999
Q ss_pred cCCCCcc
Q 005679 379 KINLGVK 385 (683)
Q Consensus 379 ~l~~~~~ 385 (683)
+++....
T Consensus 345 g~~~~~G 351 (396)
T 3ooq_A 345 GLEDRIG 351 (396)
T ss_dssp TCTTTSS
T ss_pred CCCCCee
Confidence 9975443
No 87
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=52.63 E-value=45 Score=35.86 Aligned_cols=112 Identities=12% Similarity=0.026 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHhhC-CCcEEEecCCCCCCCCC---CCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 213 DYIFISSLEVAQFL-DLPLQIHTGFGDKDLDL---RLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 213 d~~~~~l~e~a~e~-glpvq~H~G~Gd~~~~~---~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
+-.+..+++.+.++ |+++.+|+......... .+..+...-.+++.-...+.+.++.|+.+-...++..++.. ++
T Consensus 213 ~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~--g~ 290 (475)
T 2ood_A 213 PELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKK--GA 290 (475)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHhCCCCcEEEeeCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHc--CC
Confidence 34455677888999 99999999632110000 00000011122331122355788899865444443344333 23
Q ss_pred EeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCC
Q 005679 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAY 327 (683)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~ 327 (683)
.+......+.....+ ..-++++++.+..-|+.+|||+.
T Consensus 291 ~~~~~P~~~~~l~~~-~~~~~~~~~~Gv~~~~~lgTD~~ 328 (475)
T 2ood_A 291 AVVFCPCSNLFLGSG-LFRLGRATDPEHRVKMSFGTDVG 328 (475)
T ss_dssp EEEECHHHHHHTTCC-CCCHHHHTCTTSCCEEEECCCBT
T ss_pred EEEEChhhhhhcccC-cCCHHHHHhCCCCCcEEEEccCC
Confidence 332211000000000 01244555544333488999964
No 88
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=52.18 E-value=9.7 Score=30.94 Aligned_cols=66 Identities=8% Similarity=0.176 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHcCCeEEeeec
Q 005679 566 PVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN 633 (683)
Q Consensus 566 ~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~k~~ik~vA~~~G~~ATFmpK 633 (683)
-++.+|...+.+.|++|..++.....|.|.+.+.-.-+ ..+.+-..+.-++.++.++|+..++.|.
T Consensus 17 Gila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~~~l~~l~~~L~~~~~~~~~~~~~~~~ 82 (91)
T 1zpv_A 17 GIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EKQDFTYLRNEFEAFGQTLNVKINIQSA 82 (91)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SCCCHHHHHHHHHHHHHHHTEEEEEEEG
T ss_pred CHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CCCCHHHHHHHHHHHHHHcCCEEEEeeH
Confidence 47889999999999999998887666777666543210 0124456677789999999999999876
No 89
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=46.76 E-value=34 Score=36.66 Aligned_cols=152 Identities=13% Similarity=0.067 Sum_probs=72.4
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCC----CCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEe
Q 005679 215 IFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~Gd~~~----~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~ 290 (683)
.+..+++.|.++|+++.+|..-..... +..-..| ++.+.+. ...+.+.++.|+.+....++..++.. ++++
T Consensus 241 ~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~--g~~v 315 (479)
T 3h4u_A 241 LMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTP--AEYAEDL-GWVGHDVWHAHCVQLDDAGIGLFART--GTGV 315 (479)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CH--HHHHHHT-TCCSTTEEEEECTTCCHHHHHHHHHH--TCEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCeEEEEecCCCHHHHHHHHHc--CCeE
Confidence 445567889999999999996431100 0001112 2222222 34456788999976555555555544 2333
Q ss_pred ccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCc-cchhhhHHHHHHHHHHHHHhhh-hcCCCChhHHHHHHHH
Q 005679 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ETYFLGAKRAREVVFSVLRDTC-IDEDLSVGEAIEVAKD 368 (683)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-e~~~~~~~~~r~~l~~~l~~~v-~~g~l~~~ea~~~~~~ 368 (683)
......+.....+. .-++++++.+ -++.+|||+.... ... ....++... .+.... ....++..+ +=+
T Consensus 316 ~~~p~s~~~l~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~~~~----al~ 384 (479)
T 3h4u_A 316 AHCPCSNMRLASGI-APVKKMRLAG--VPVGLGVDGSASNDGAQ--MVAEVRQAL--LLQRVGFGPDAMTARE----ALE 384 (479)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHTT--CCEEECCCCTTSSCCCC--HHHHHHHHH--HHHHHHHCTTSCCHHH----HHH
T ss_pred EEChhHhhhcCCCC-CCHHHHHHCC--CeEEEeCCCCccCCCcC--HHHHHHHHH--HHhcccCCCCCCCHHH----HHH
Confidence 22111100000000 0244555543 3788999975432 111 111222111 111111 122366544 445
Q ss_pred HHHHHHHHHhcCCC
Q 005679 369 IFALNAAQFYKINL 382 (683)
Q Consensus 369 I~~~NA~rly~l~~ 382 (683)
..-.|+++++|++.
T Consensus 385 ~~T~~~A~~lg~~~ 398 (479)
T 3h4u_A 385 IATLGGAKVLNRDD 398 (479)
T ss_dssp HTTHHHHHHHTCSS
T ss_pred HHHHHHHHHhCCCC
Confidence 55688999999964
No 90
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=43.82 E-value=82 Score=33.56 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCC
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGF 236 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~ 236 (683)
...+..+++.+.++|+|+.+|..-
T Consensus 205 ~e~l~~~~~~A~~~g~~v~~H~~~ 228 (467)
T 1xrt_A 205 SSVMRKALELASQLGVPIMDHCED 228 (467)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCCG
T ss_pred HHHHHHHHHHHHhcCCEEEEECCC
Confidence 345556778889999999999854
No 91
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=41.68 E-value=71 Score=34.16 Aligned_cols=106 Identities=15% Similarity=0.062 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCCC---C-CCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCee
Q 005679 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR---L-SNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (683)
Q Consensus 213 d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~---~-~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnV 288 (683)
+..+..+++.+.++|+++.+|+...+...... + ..+ +..+.+. ...+-+.++.|+.+-...++..++.. ++
T Consensus 228 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~i~~l~~~--gv 302 (492)
T 2paj_A 228 PREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSP--VAFCGEH-DWLGSDVWYAHLVKVDADEIALLAQT--GT 302 (492)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC-------------CCCH--HHHHHHT-TCCSTTEEEESCCSCCHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCH--HHHHHHC-CCCCCCcEEEEEecCCHHHHHHHHHc--CC
Confidence 34455677888999999999997532211110 0 112 2222221 23344678899965444444444432 34
Q ss_pred EeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCC
Q 005679 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDA 326 (683)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~ 326 (683)
++......+.....++ .-++.+++.+ -++.+|||+
T Consensus 303 ~v~~~p~~~~~l~~~~-~p~~~~~~~G--v~v~lgTD~ 337 (492)
T 2paj_A 303 GVAHCPQSNGRLGSGI-CPVREMADAG--VPVSIGVDG 337 (492)
T ss_dssp EEEECHHHHHCC------CCTTHHHHT--CCEEECCCH
T ss_pred EEEECchhhcccCCCC-CCHHHHHHCC--CcEEEeCCC
Confidence 4433211000000010 1233444443 368899995
No 92
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=41.44 E-value=1.7e+02 Score=30.66 Aligned_cols=34 Identities=12% Similarity=0.040 Sum_probs=23.2
Q ss_pred HHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005679 345 FSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 345 ~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
..++...++.+.+++.+ +=+.+-.|+++++|++.
T Consensus 345 ~~~~~~~~~~~~ls~~~----al~~~T~~pA~~lgl~~ 378 (458)
T 1gkp_A 345 NLLYTYGVSRGRLDIHR----FVDAASTKAAKLFGLFP 378 (458)
T ss_dssp HHHHHHHTTSSSCCHHH----HHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHcCCCCHHH----HHHHHhhCHHHHhCCCC
Confidence 33445566667788765 44556788899999953
No 93
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=39.60 E-value=2.9e+02 Score=27.19 Aligned_cols=101 Identities=13% Similarity=-0.007 Sum_probs=46.6
Q ss_pred CceEEEecCC-CCcHH---H-HHHHHhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh
Q 005679 262 KCRFVLLHAS-YPFSK---E-ASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG 336 (683)
Q Consensus 262 ~l~~vl~H~g-~p~~~---e-~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~ 336 (683)
+..-|++|+. |++.. + +..++..=--+.+..+....... .......+.+++. + -.+..|||++..-.. ...
T Consensus 129 g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~~iEiN~~s~~g~~g-~~~~~~~~~~~~~-g-l~~~igSDaH~~~~r-~~~ 204 (262)
T 3qy7_A 129 GYIPVIAHPERNREIRENPSLLYHLVEKGAASQITSGSLAGIFG-KQLKAFSLRLVEA-N-LIHFVASDAHNVKTR-NFH 204 (262)
T ss_dssp TCEEEEECGGGCHHHHHCTHHHHHHHHTTCEEEEEHHHHHTTTC-HHHHHHHHHHHHT-T-CCCEEECCBCSSSSS-CCC
T ss_pred CCcEEEECCCccccccccHHHHHHHHHCCCEEEEECCccCcccc-hHHHHHHHHHHhC-C-CeEEEEccCCCCCCC-Cch
Confidence 3567899995 33221 1 22333221123444433322111 1234455555553 2 245689998853221 111
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcC
Q 005679 337 AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (683)
Q Consensus 337 ~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l 380 (683)
-....+.+.+-+ .. +.+++ ++.|++++++=
T Consensus 205 ~~~a~~~l~~~~---------G~----~~a~~-~~~n~~~il~~ 234 (262)
T 3qy7_A 205 TQEALYVLEKEF---------GS----ELPYM-LTENAELLLRN 234 (262)
T ss_dssp HHHHHHHHHHHH---------CS----HHHHH-HHHHHHHHHTT
T ss_pred HHHHHHHHHHHh---------CH----HHHHH-HHHHHHHHHCC
Confidence 122222222111 11 34555 89999999963
No 94
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=32.87 E-value=62 Score=30.96 Aligned_cols=108 Identities=13% Similarity=0.082 Sum_probs=54.8
Q ss_pred hHHHHhhcCCCCceEEEecCCCC-----cHHHHHHHHhhCCeeEeccccccC----CccHHHHHH---HHHHHHhhCCCC
Q 005679 251 LRAILEDKRFSKCRFVLLHASYP-----FSKEASYLAYVYPQVYLDFGLAIP----KLSVQGMIS---SIKELLELAPTK 318 (683)
Q Consensus 251 L~~l~~~~~~P~l~~vl~H~g~p-----~~~e~~~la~~~pnVy~d~s~~~~----~~~~~g~~~---~l~~~le~~~~~ 318 (683)
....++ . ++. |+.|++.+ +..+.+..| .-.||.+++..... ..++.+... .+.++....+ -
T Consensus 89 n~~a~~--~--~vD-II~Hp~~~~~~~~~~~~~a~~A-~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g-~ 161 (212)
T 1v77_A 89 IRYSIE--K--GVD-AIISPWVNRKDPGIDHVLAKLM-VKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYK-V 161 (212)
T ss_dssp HHHHHH--T--TCS-EEECTTTTSSSCSCCHHHHHHH-HHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred HHHHHh--C--CCC-EEecccccccCCCCCHHHHHHH-HHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcC-C
Confidence 344555 2 454 45588644 223445555 33489998876321 011222222 2333444445 3
Q ss_pred cEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhc
Q 005679 319 KVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (683)
Q Consensus 319 kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~ 379 (683)
.|++|||++..-+. ........ ++.+ -.++ + +.+.+.+..|+++++.
T Consensus 162 ~ivisSDAh~~~~v--~~~~~~~~----l~~~----~G~~--~--e~~~~~l~~~~~~i~~ 208 (212)
T 1v77_A 162 RRFLTSSAQEKWDV--RYPRDLIS----LGVV----IGME--I--PQAKASISMYPEIILK 208 (212)
T ss_dssp CEEEECCCSSGGGC--CCHHHHHH----HHHH----TTCC--H--HHHHHTTTHHHHHHHC
T ss_pred CEEEeCCCCChhhc--CCHHHHHH----HHHH----cCCC--H--HHHHHHHHHHHHHHHH
Confidence 79999999843322 12222222 2222 1344 3 5577888888888775
No 95
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=32.27 E-value=40 Score=35.21 Aligned_cols=78 Identities=19% Similarity=0.265 Sum_probs=46.3
Q ss_pred ccCchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecC--CCCcHH------
Q 005679 205 RITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHA--SYPFSK------ 276 (683)
Q Consensus 205 ~~~~~~l~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~--g~p~~~------ 276 (683)
.+....+.++ |+++.+++.|+||.+=+|... ...-..--+.+.. .-+ +|+++|| +||..+
T Consensus 116 KI~S~~~~N~---pLL~~va~~gKPviLstGmst------l~Ei~~Ave~i~~--~g~-~viLlhC~s~YPt~~~~~nL~ 183 (350)
T 3g8r_A 116 KIASCSFTDW---PLLERIARSDKPVVASTAGAR------REDIDKVVSFMLH--RGK-DLTIMHCVAEYPTPDDHLHLA 183 (350)
T ss_dssp EECSSSTTCH---HHHHHHHTSCSCEEEECTTCC------HHHHHHHHHHHHT--TTC-CEEEEECCCCSSCCGGGCCTT
T ss_pred EECcccccCH---HHHHHHHhhCCcEEEECCCCC------HHHHHHHHHHHHH--cCC-CEEEEecCCCCCCCcccCCHH
Confidence 3444555553 567778899999999999641 0000111122332 212 7999998 577433
Q ss_pred HHHHHHhhCCeeEecccc
Q 005679 277 EASYLAYVYPQVYLDFGL 294 (683)
Q Consensus 277 e~~~la~~~pnVy~d~s~ 294 (683)
.+-.|...||++=++.|.
T Consensus 184 aI~~Lk~~fp~lpVG~Sd 201 (350)
T 3g8r_A 184 RIKTLRQQYAGVRIGYST 201 (350)
T ss_dssp HHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHCCCCCEEcCC
Confidence 345667789887776653
No 96
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=30.49 E-value=1.6e+02 Score=30.74 Aligned_cols=152 Identities=20% Similarity=0.076 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCCCCCC----CCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeE
Q 005679 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLDL----RLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (683)
Q Consensus 214 ~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~----~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy 289 (683)
-.+..+++.|.++|+++.+|.+-.... .. .-..| ++.+.+. ..-+-+.++.|+.+-...+...++..- +.
T Consensus 219 ~~l~~~~~~a~~~g~~v~~H~~e~~~~-~~~~~~~~~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~g--~~ 292 (456)
T 3ls9_A 219 ELFEAFAQMAADYDVRLHTHFYEPLDA-GMSDHLYGMTP--WRFLEKH-GWASDRVWLAHAVVPPREEIPEFADAG--VA 292 (456)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCTTHH-HHHHHHHSSCH--HHHHHHT-TCSSTTEEEEECCSCCGGGHHHHHHHT--CE
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCchH-HHHHHHhCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHcC--CE
Confidence 345567888999999999999643110 00 00011 1222221 333556788898654444444554432 22
Q ss_pred eccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCC-ccchhhhHHHHHHHHHHHHHhhhhcC----CCChhHHHH
Q 005679 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PETYFLGAKRAREVVFSVLRDTCIDE----DLSVGEAIE 364 (683)
Q Consensus 290 ~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-Pe~~~~~~~~~r~~l~~~l~~~v~~g----~l~~~ea~~ 364 (683)
+......+.....++ .-++.+++.+ -++.+|||+... +.. .....++..+ .+....... .++..+
T Consensus 293 ~~~~p~s~~~l~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--- 362 (456)
T 3ls9_A 293 IAHLIAPDLRMGWGL-APIREYLDAG--ITVGFGTTGSASNDGG--NLLGDLRLAA--LAHRPADPNEPEKWLSARE--- 362 (456)
T ss_dssp EEECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCTTSSCCC--CHHHHHHHHH--HHTGGGSTTCGGGSCCHHH---
T ss_pred EEEChhHHhhcCCCc-chHHHHHHCC--CcEEEECCCCccCCCC--CHHHHHHHHH--HHhccccccccccCCCHHH---
Confidence 221110000000000 0234455543 377899996542 111 1111222221 111111111 466544
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 005679 365 VAKDIFALNAAQFYKINL 382 (683)
Q Consensus 365 ~~~~I~~~NA~rly~l~~ 382 (683)
+=+..-.|+++.++++.
T Consensus 363 -al~~~T~~~A~~lg~~~ 379 (456)
T 3ls9_A 363 -LLRMATRGSAECLGRPD 379 (456)
T ss_dssp -HHHHTTHHHHHHTTCTT
T ss_pred -HHHHHHHHHHHHhCCCC
Confidence 34444578889999864
No 97
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=29.03 E-value=4.3e+02 Score=26.76 Aligned_cols=23 Identities=13% Similarity=0.056 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhhCCCcEEEecCC
Q 005679 214 YIFISSLEVAQFLDLPLQIHTGF 236 (683)
Q Consensus 214 ~~~~~l~e~a~e~glpvq~H~G~ 236 (683)
-.+..+++.|.++|+|+.+|+..
T Consensus 198 ~~l~~~~~~A~~~g~~v~~H~~~ 220 (403)
T 2qt3_A 198 GSLDLCFKLAKEYDVDIDYHIHD 220 (403)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEeCC
Confidence 34556788899999999999864
No 98
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=28.60 E-value=3e+02 Score=25.30 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhCCCceeEeeccC--------CCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHcCCeEEeeec
Q 005679 565 SPVFQEVLADLHSLNISVEQLHAEA--------GKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN 633 (683)
Q Consensus 565 ~~~~~ei~~~l~~~Gi~ve~~h~E~--------~pGQ~Ei~l~~~~~l~aaD~~~~~k~~ik~vA~~~G~~ATFmpK 633 (683)
-.++.+|...|.+.|+.|+.+..-. +.+.|-+.+.-.-+ . .-..-.+|..+..+|.+.|+...+.+-
T Consensus 104 ~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~-~~~~~~l~~~l~~~~~~~~~~~~~~~~ 178 (192)
T 1u8s_A 104 LGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-S-GCNLMQLQEEFDALCTALDVQGSLNFI 178 (192)
T ss_dssp TTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-T-TSCHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred ccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-C-CCCHHHHHHHHHHHHHHhCceEEEEEc
Confidence 3588999999999999998876553 45566555543211 1 113455788888999999999999884
No 99
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=28.35 E-value=1.2e+02 Score=31.35 Aligned_cols=158 Identities=18% Similarity=0.136 Sum_probs=79.4
Q ss_pred cHHHHHHHHHHHHHhhccc-ceeeeeeeccccCCCCCCCCCHHHHHHHHHHHHhcC---CCCccCc--hhhhhHHHHHHH
Q 005679 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG---KPVRITN--KSLIDYIFISSL 220 (683)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vgfksi~~y~~gl~~~~~~~~~ea~~~~~~~l~~~---~~~~~~~--~~l~d~~~~~l~ 220 (683)
+++++++++.+.++.+... -+..+.|.|..+.+ +++++.+.++.+..-. .+..+.. .......+..++
T Consensus 113 ~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~------~~~~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~ 186 (343)
T 3rys_A 113 ALETCVNGVANALATSEEDFGVSTLLIAAFLRDM------SEDSALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLY 186 (343)
T ss_dssp CHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTS------CHHHHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCC------CHHHHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHH
Confidence 4666677666666544211 14577777775444 3555665555444311 1111110 111112355778
Q ss_pred HHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCc--HHHHHHHHhhC------C--eeEe
Q 005679 221 EVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF--SKEASYLAYVY------P--QVYL 290 (683)
Q Consensus 221 e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~--~~e~~~la~~~------p--nVy~ 290 (683)
+.|.++|+++.+|.|-.. .|..+...+.. -.++ + +.|+-.-. -..+..++..- | |+++
T Consensus 187 ~~A~~~gl~~~~HagE~~--------~~~~i~~al~~-lg~~-r--IgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l 254 (343)
T 3rys_A 187 QRAAEAGLRRIAHAGEEG--------PASYITEALDV-LHVE-R--IDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRL 254 (343)
T ss_dssp HHHHHTTCEEEEEESSSS--------CHHHHHHHHHT-SCCS-E--EEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHT
T ss_pred HHHHHCCCeEEEeeCCCC--------CHHHHHHHHhc-CCcc-e--eeeeeeecCChHHHHHHHhcCCCeeEchhHHHHh
Confidence 999999999999998532 24445444431 1122 2 57873221 12334444321 2 4554
Q ss_pred ccccccCCccHHHHHHHHHHHHhhCCCCcEEEecCCCCCcc
Q 005679 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPE 331 (683)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe 331 (683)
.. ++... ..-++++++.+ =++..|||.+.+-.
T Consensus 255 ~~---~~~~~----~hPi~~ll~~G--v~V~l~TDdp~~~~ 286 (343)
T 3rys_A 255 RA---VDKLA----DHPLPEMLAIG--LNVCVNSDDPAYFG 286 (343)
T ss_dssp TS---SSCGG----GCSHHHHHHTT--CCEEECCBSTTTTT
T ss_pred CC---CCCcc----cchHHHHHHCC--CeEEEeCCCccccC
Confidence 33 11110 01245555544 47889999766544
No 100
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=28.00 E-value=1.4e+02 Score=31.34 Aligned_cols=84 Identities=13% Similarity=0.075 Sum_probs=49.0
Q ss_pred cHHHHHHHHHHHHHhhccc-ceeeeeeeccccCCCCCCCCCHHHHHHHHHHHHhcC----CCCccCch--hhhhHHHHHH
Q 005679 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG----KPVRITNK--SLIDYIFISS 219 (683)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vgfksi~~y~~gl~~~~~~~~~ea~~~~~~~l~~~----~~~~~~~~--~l~d~~~~~l 219 (683)
+++++++++.+.++.+... -+..+.|.|..+.+ +++++.+.+..+.... .+..+... ......+.++
T Consensus 129 ~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~------~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~ 202 (380)
T 4gxw_A 129 PYADAQAAIVTGMRDAARDFGIGARLIPSIDREQ------DPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKA 202 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTS------CHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCC------CHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHH
Confidence 4777777777776654311 24566777765443 3566666655444321 11111111 1112235678
Q ss_pred HHHHhhCCCcEEEecCC
Q 005679 220 LEVAQFLDLPLQIHTGF 236 (683)
Q Consensus 220 ~e~a~e~glpvq~H~G~ 236 (683)
++.|++.|+++.+|.|-
T Consensus 203 f~~ar~~Gl~~t~HAGE 219 (380)
T 4gxw_A 203 YRDARAAGFRTTAHAGE 219 (380)
T ss_dssp HHHHHHTTCEEEEEESC
T ss_pred HHHHHHcCCCeeeeccc
Confidence 99999999999999985
No 101
>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1
Probab=27.84 E-value=2.2e+02 Score=24.93 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=47.2
Q ss_pred CCcccchHHHHHHHHHHHHhCCCceeE--------eeccC---CCCceEEecCcChHHH--------HHHHHHHHHHHHH
Q 005679 558 TAAYDAVSPVFQEVLADLHSLNISVEQ--------LHAEA---GKGQFEIALGHTVAAK--------AADNLIFTREVLR 618 (683)
Q Consensus 558 ~~~~~~~~~~~~ei~~~l~~~Gi~ve~--------~h~E~---~pGQ~Ei~l~~~~~l~--------aaD~~~~~k~~ik 618 (683)
+.+......++.||...|.+.||+.++ .|... ..=||||.+--.+.+. ..-+.+.+|.++.
T Consensus 33 tTSsk~P~eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEiEVcKvp~l~l~GI~fKRisGd~w~YK~lc~ 112 (126)
T 1v5s_A 33 QGSSGSSGDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIAS 112 (126)
T ss_dssp CCCCSSHHHHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEEECCCCTTTCSCCCEEEEEESCHHHHHHHHH
T ss_pred eecCCCHHHHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEEEEEEecCCCceeEEEeeccCchhHHHHHHH
Confidence 444456789999999999999999987 12211 1238999876442110 1114489999999
Q ss_pred HHHHHcCC
Q 005679 619 AVARKHGL 626 (683)
Q Consensus 619 ~vA~~~G~ 626 (683)
+|..+..+
T Consensus 113 ~IL~eLkL 120 (126)
T 1v5s_A 113 KIANELKL 120 (126)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHhc
Confidence 99988765
No 102
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=27.77 E-value=3.5e+02 Score=28.08 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=23.2
Q ss_pred HHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005679 345 FSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (683)
Q Consensus 345 ~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly~l~~ 382 (683)
...+..+++.+.+++.+ +=+.+-.|+++++|++.
T Consensus 343 ~~~~~~~~~~~~l~~~~----al~~~T~~~A~~lgl~~ 376 (458)
T 1gkr_A 343 PMMLTNGVNKGRLSLER----LVEVMCEKPAKLFGIYP 376 (458)
T ss_dssp HHHHHHTGGGTSSCHHH----HHHHHTHHHHHHHTCTT
T ss_pred HHHHHHHHHhCCCCHHH----HHHHHhhhHHHHhCCCC
Confidence 34455566667788765 44556678889999963
No 103
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=27.61 E-value=2.6e+02 Score=30.57 Aligned_cols=148 Identities=21% Similarity=0.152 Sum_probs=72.1
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEec
Q 005679 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (683)
Q Consensus 212 ~d~~~~~l~e~a~e~glpvq~H~G~Gd~~~~~~~~~p~~L~~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d 291 (683)
..-.+..+++.|.++|++|.+|.- |+..+ -..|+.+.+. + .+..+.|+.+.-.+++..++.. +|++.
T Consensus 327 ~~e~l~~~v~~A~~~G~~v~~Ha~-gd~ai------~~~l~a~~~~---~-~r~~ieH~~~~~~e~i~~la~~--gv~~~ 393 (534)
T 3icj_A 327 NKDEIVEVIERAKPLGLDVAVHAI-GDKAV------DVALDAFEEA---E-FSGRIEHASLVRDDQLERIKEL--KVRIS 393 (534)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEEEC-SHHHH------HHHHHHHHHH---T-CCCEEEECCBCCHHHHHHHHHH--TCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc-ChHHH------HHHHHHHHhc---c-CCCEEEECCCCCHHHHHHHHHc--CCeEE
Confidence 334456678899999999999985 32110 1123333332 1 5677889876544444455432 23332
Q ss_pred cccccC----Cc-cHHHHH-----HHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhH
Q 005679 292 FGLAIP----KL-SVQGMI-----SSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE 361 (683)
Q Consensus 292 ~s~~~~----~~-~~~g~~-----~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~r~~l~~~l~~~v~~g~l~~~e 361 (683)
....+. .. ..-|.. .-++.+++. =++.+|||++..|.. .-...+..+.+ ..+..+..++..+
T Consensus 394 ~~P~~~~~~~~~~~~lg~~r~~~~~p~~~l~~~---v~valGSD~p~~~~~---p~~~~~~av~r--~~~~~~~~ls~~e 465 (534)
T 3icj_A 394 AQPHFIVSDWWIVNRVGEERAKWAYRLKTLSSI---TKLGFSTDSPIEPAD---PWVSIDAAVNR--YVVDPGERVSREE 465 (534)
T ss_dssp ECTTHHHHCTTHHHHHHHHHGGGBTCHHHHHHH---SCEEECCTTTTSCCC---HHHHHHHHHHC--CSSCGGGCCCHHH
T ss_pred EccccccchhHHHHhhCHHHHhccHHHHHHHHh---CCEEeecCCCCCCCC---HHHHHHHHHhc--cccCcccCCCHHH
Confidence 111100 00 011111 125556665 468899997544321 11112222211 1122233466543
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcc
Q 005679 362 AIEVAKDIFALNAAQFYKINLGVK 385 (683)
Q Consensus 362 a~~~~~~I~~~NA~rly~l~~~~~ 385 (683)
+=+..-.|+++.++++ ..+
T Consensus 466 ----aL~~~T~~~A~~lg~e-~~G 484 (534)
T 3icj_A 466 ----ALHLYTHGSAQVTLAE-DLG 484 (534)
T ss_dssp ----HHHHTTHHHHHHTTCT-TCS
T ss_pred ----HHHHHHHHHHHHhCCC-CCe
Confidence 3334456778888887 443
No 104
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=25.05 E-value=1.5e+02 Score=30.75 Aligned_cols=22 Identities=14% Similarity=-0.050 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhCCCcEEEecCC
Q 005679 215 IFISSLEVAQFLDLPLQIHTGF 236 (683)
Q Consensus 215 ~~~~l~e~a~e~glpvq~H~G~ 236 (683)
.+..+++.+.++|+++.+|+..
T Consensus 224 ~~~~~~~~a~~~g~~v~~H~~~ 245 (416)
T 2q09_A 224 QTEQVYLAADQYGLAVKGHMDQ 245 (416)
T ss_dssp HHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHHCCCcEEEEECC
Confidence 4455678888999999999863
No 105
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=22.19 E-value=66 Score=33.42 Aligned_cols=21 Identities=24% Similarity=0.314 Sum_probs=16.8
Q ss_pred HHHHHHHHhhCCCcEEEecCC
Q 005679 216 FISSLEVAQFLDLPLQIHTGF 236 (683)
Q Consensus 216 ~~~l~e~a~e~glpvq~H~G~ 236 (683)
+..+++.+.++|+++.+|+..
T Consensus 183 l~~~~~~a~~~g~~v~~H~~~ 203 (406)
T 1p1m_A 183 LKRVFDTAKSLNAPVTIHLYE 203 (406)
T ss_dssp HHHHHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHHHCCCcEEEEcCC
Confidence 444677888999999999963
No 106
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=21.49 E-value=1.2e+02 Score=26.29 Aligned_cols=66 Identities=14% Similarity=0.098 Sum_probs=43.3
Q ss_pred cccchHHHHHHHHHHHHhCCCceeEeec-----cC------CCCceEEecCcChHH--------HHHHHHHHHHHHHHHH
Q 005679 560 AYDAVSPVFQEVLADLHSLNISVEQLHA-----EA------GKGQFEIALGHTVAA--------KAADNLIFTREVLRAV 620 (683)
Q Consensus 560 ~~~~~~~~~~ei~~~l~~~Gi~ve~~h~-----E~------~pGQ~Ei~l~~~~~l--------~aaD~~~~~k~~ik~v 620 (683)
+.....+++.+|...|.+.||.+++-.. .. +.-|||+.+--.+.+ +..=+.+.||.++..|
T Consensus 35 S~~~P~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~gV~~kRi~Gd~~~yk~lc~~i 114 (120)
T 3ose_A 35 SSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKI 114 (120)
T ss_dssp ECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEEEEEEEEEESCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCceeEEEEecCCCHHHHHHHHHHH
Confidence 3456789999999999999998887432 11 234788776443211 0111456788888888
Q ss_pred HHHcC
Q 005679 621 ARKHG 625 (683)
Q Consensus 621 A~~~G 625 (683)
..+..
T Consensus 115 l~~L~ 119 (120)
T 3ose_A 115 ANELK 119 (120)
T ss_dssp HHHCC
T ss_pred HHHhc
Confidence 77654
Done!