BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005680
(683 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 58/303 (19%)
Query: 302 EFCKEKDAIGMVIRSSELSCAFREYAAE--DIRLATEDFSERFRLKCAGDWTNVYRGRL- 358
++ K ++I + SS L F Y D+ AT +F +F L G + VY+G L
Sbjct: 4 KYSKATNSINDALSSSYL-VPFESYRVPLVDLEEATNNFDHKF-LIGHGVFGKVYKGVLR 61
Query: 359 NHASVAIK--TLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGN 414
+ A VA+K T + E+F+ ++ L+ RHPHLV+++G C E ++++YM NGN
Sbjct: 62 DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121
Query: 415 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL 474
L+ L+ S ++ W R+ I GL +LH+ R I+H + +ILL
Sbjct: 122 LKRHLYGSDLP------TMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILL 172
Query: 475 DRNLVAKISGLGLN---------------------------ICDQLNVRSDIRAFGTLLL 507
D N V KI+ G++ I +L +SD+ +FG +L
Sbjct: 173 DENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLF 232
Query: 508 HLLTGRN---------WAGLVEKAM-ALDQTTLMQVLDGNAG--IWPLDLAEELAGIALK 555
+L R+ L E A+ + + L Q++D N I P L + A+K
Sbjct: 233 EVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESL-RKFGDTAVK 291
Query: 556 CLS 558
CL+
Sbjct: 292 CLA 294
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 58/303 (19%)
Query: 302 EFCKEKDAIGMVIRSSELSCAFREYAAE--DIRLATEDFSERFRLKCAGDWTNVYRGRL- 358
++ K ++I + SS L F Y D+ AT +F +F L G + VY+G L
Sbjct: 4 KYSKATNSINDALSSSYL-VPFESYRVPLVDLEEATNNFDHKF-LIGHGVFGKVYKGVLR 61
Query: 359 NHASVAIK--TLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGN 414
+ A VA+K T + E+F+ ++ L+ RHPHLV+++G C E ++++YM NGN
Sbjct: 62 DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121
Query: 415 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL 474
L+ L+ S ++ W R+ I GL +LH+ R I+H + +ILL
Sbjct: 122 LKRHLYGSDLP------TMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILL 172
Query: 475 DRNLVAKISGLGLN---------------------------ICDQLNVRSDIRAFGTLLL 507
D N V KI+ G++ I +L +SD+ +FG +L
Sbjct: 173 DENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLF 232
Query: 508 HLLTGRN---------WAGLVEKAM-ALDQTTLMQVLDGNAG--IWPLDLAEELAGIALK 555
+L R+ L E A+ + + L Q++D N I P L + A+K
Sbjct: 233 EVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESL-RKFGDTAVK 291
Query: 556 CLS 558
CL+
Sbjct: 292 CLA 294
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 53/231 (22%)
Query: 323 FREYAAEDIRLATEDFSERFRLKCAGD------WTNVYRGRLNHASVAIKTLNNGLS--- 373
F ++ +++ T +F ER + G+ + VY+G +N+ +VA+K L +
Sbjct: 12 FHSFSFYELKNVTNNFDER-PISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 374 ---EEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKN 428
++ F ++ + +H +LV ++G S+ C+V+ YMPNG+L D+L +
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--------S 122
Query: 429 C-SRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
C L W R IA G++FLH +H + ++ILLD AKIS GL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 488 --------------------------NICDQLNVRSDIRAFGTLLLHLLTG 512
+ ++ +SDI +FG +LL ++TG
Sbjct: 180 ARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 53/231 (22%)
Query: 323 FREYAAEDIRLATEDFSERFRLKCAGD------WTNVYRGRLNHASVAIKTLNNGLS--- 373
F ++ +++ T +F ER + G+ + VY+G +N+ +VA+K L +
Sbjct: 12 FHSFSFYELKNVTNNFDER-PISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 374 ---EEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKN 428
++ F ++ + +H +LV ++G S+ C+V+ YMPNG+L D+L +
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--------S 122
Query: 429 C-SRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
C L W R IA G++FLH +H + ++ILLD AKIS GL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 488 --------------------------NICDQLNVRSDIRAFGTLLLHLLTG 512
+ ++ +SDI +FG +LL ++TG
Sbjct: 180 ARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 53/231 (22%)
Query: 323 FREYAAEDIRLATEDFSERFRLKCAGD------WTNVYRGRLNHASVAIKTLNNGLS--- 373
F ++ +++ T +F ER + G+ + VY+G +N+ +VA+K L +
Sbjct: 6 FHSFSFYELKNVTNNFDER-PISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 64
Query: 374 ---EEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKN 428
++ F ++ + +H +LV ++G S+ C+V+ YMPNG+L D+L +
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--------S 116
Query: 429 C-SRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
C L W R IA G++FLH +H + ++ILLD AKIS GL
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 173
Query: 488 --------------------------NICDQLNVRSDIRAFGTLLLHLLTG 512
+ ++ +SDI +FG +LL ++TG
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 51/230 (22%)
Query: 323 FREYAAEDIRLATEDFSER-----FRLKCAGDWTNVYRGRLNHASVAIKTLNNGLS---- 373
F ++ +++ T +F ER G + VY+G +N+ +VA+K L +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 374 --EEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNC 429
++ F ++ +H +LV ++G S+ C+V+ Y PNG+L D+L +C
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--------SC 114
Query: 430 -SRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL- 487
L W R IA G++FLH +H + ++ILLD AKIS GL
Sbjct: 115 LDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171
Query: 488 -------------------------NICDQLNVRSDIRAFGTLLLHLLTG 512
+ ++ +SDI +FG +LL ++TG
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1T1H|A Chain A, Nmr Solution Structure Of The U Box Domain From Atpub14,
An Armadillo Repeat Containing Protein From Arabidopsis
Thaliana
Length = 78
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 605 SNDVPSVFICPIFQEVMKTPHVAADGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYLTPN 664
S + P F CPI E+MK P + + G +YE ++++WL GH T P + L H LTPN
Sbjct: 2 SPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPN 61
Query: 665 HTLRSLIQEW 674
+ L+SLI W
Sbjct: 62 YVLKSLIALW 71
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 77/266 (28%)
Query: 347 AGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAK--------VSFLTAVRHPHLVAVMGC 398
AG + V+R + + VA+K L E+DF A+ V+ + +RHP++V MG
Sbjct: 47 AGSFGTVHRAEWHGSDVAVKIL----MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLD---RIHIAHEVCLGLSF 453
++ IV EY+ G+L Y+ ++ A LD R+ +A++V G+++
Sbjct: 103 VTQPPNLSIVTEYLSRGSL----------YRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 454 LHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----------------------- 490
LH+ P PIVH +L ++L+D+ K+ GL+
Sbjct: 153 LHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL 211
Query: 491 --DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 548
+ N +SD+ +FG +L L T +Q GN L+ A+
Sbjct: 212 RDEPSNEKSDVYSFGVILWELAT-------------------LQQPWGN-----LNPAQV 247
Query: 549 LAGIALKCLSADQDANRDLRIAGVMK 574
+A + KC + N + ++A +++
Sbjct: 248 VAAVGFKCKRLEIPRNLNPQVAAIIE 273
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 77/266 (28%)
Query: 347 AGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAK--------VSFLTAVRHPHLVAVMGC 398
AG + V+R + + VA+K L E+DF A+ V+ + +RHP++V MG
Sbjct: 47 AGSFGTVHRAEWHGSDVAVKIL----MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLD---RIHIAHEVCLGLSF 453
++ IV EY+ G+L Y+ ++ A LD R+ +A++V G+++
Sbjct: 103 VTQPPNLSIVTEYLSRGSL----------YRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 454 LHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----------------------- 490
LH+ P PIVH L ++L+D+ K+ GL+
Sbjct: 153 LHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVL 211
Query: 491 --DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 548
+ N +SD+ +FG +L L T +Q GN L+ A+
Sbjct: 212 RDEPSNEKSDVYSFGVILWELAT-------------------LQQPWGN-----LNPAQV 247
Query: 549 LAGIALKCLSADQDANRDLRIAGVMK 574
+A + KC + N + ++A +++
Sbjct: 248 VAAVGFKCKRLEIPRNLNPQVAAIIE 273
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 330 DIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVR 388
++ E S +F L G W LN VAIKT+ G +SEEDF + + +
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYW-------LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 60
Query: 389 HPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHE 446
HP LV + G C E C+VFE+M +G L D L R + A L + + +
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLD 111
Query: 447 VCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VC G+++L E ++H L + L+ N V K+S G+
Sbjct: 112 VCEGMAYL---EEASVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 330 DIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVR 388
++ E S +F L G W LN VAIKT+ G +SEEDF + + +
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYW-------LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 60
Query: 389 HPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHE 446
HP LV + G C E C+VFE+M +G L D L R + A L + + +
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLD 111
Query: 447 VCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VC G+++L E ++H L + L+ N V K+S G+
Sbjct: 112 VCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 330 DIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVR 388
++ E S +F L G W LN VAIKT+ G +SEEDF + + +
Sbjct: 11 ELTFVQEIGSGQFGLVHLGYW-------LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 63
Query: 389 HPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHE 446
HP LV + G C E C+VFE+M +G L D L R + A L + + +
Sbjct: 64 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLD 114
Query: 447 VCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VC G+++L E ++H L + L+ N V K+S G+
Sbjct: 115 VCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 330 DIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVR 388
++ E S +F L G W LN VAIKT+ G +SEEDF + + +
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYW-------LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 58
Query: 389 HPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHE 446
HP LV + G C E C+VFE+M +G L D L R + A L + + +
Sbjct: 59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLD 109
Query: 447 VCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VC G+++L E ++H L + L+ N V K+S G+
Sbjct: 110 VCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMT 148
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 34/185 (18%)
Query: 307 KDAIGMVIRSSELSCAFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIK 366
+ ++ MVI SEL+ E S +F L G W LN VAIK
Sbjct: 17 RGSLHMVIDPSELT------------FVQEIGSGQFGLVHLGYW-------LNKDKVAIK 57
Query: 367 TLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
T+ G +SE+DF + + + HP LV + G C E C+VFE+M +G L D L
Sbjct: 58 TIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL---- 113
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 483
R + A L + + +VC G+++L E ++H L + L+ N V K+S
Sbjct: 114 RTQRGLFAAETL-----LGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVS 165
Query: 484 GLGLN 488
G+
Sbjct: 166 DFGMT 170
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCS--E 401
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 42 GGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 402 LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
IV EYMP GNL D L + C+R + +++A ++ + +L E +
Sbjct: 102 PFYIVTEYMPYGNLLDYL-------RECNREEVTA-VVLLYMATQISSAMEYL---EKKN 150
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N V K++ GL+ + ++
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 211 KSDVWAFGVLLWEIAT 226
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 53/285 (18%)
Query: 323 FREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHAS-VAIKTLNNGL---SEEDFQ 378
+ ++ ++++A+++FS + + G + VY+GRL + VA+K L E FQ
Sbjct: 25 LKRFSLRELQVASDNFSNK-NILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 379 AKVSFLTAVRHPHLVAVMGCC--SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARA-- 434
+V ++ H +L+ + G C + +V+ YM NG++ +C R R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV-----------ASCLRERPES 132
Query: 435 ---LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL-NIC 490
L W R IA GL++LH I+H + ++ILLD A + GL +
Sbjct: 133 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
Query: 491 DQLNV-------------------------RSDIRAFGTLLLHLLTGRNWAGLVEKAMAL 525
D + ++D+ +G +LL L+TG+ L +A
Sbjct: 193 DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR--LAN 250
Query: 526 DQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIA 570
D ++ LD G+ E L + L+ D++ + +++A
Sbjct: 251 DDDVML--LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVA 293
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 30 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 196 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 557 LSADQD 562
D +
Sbjct: 252 WRKDPE 257
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 30 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEP 86
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 196 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 557 LSADQD 562
D +
Sbjct: 252 WRKDPE 257
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 30 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 196 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 557 LSADQD 562
D +
Sbjct: 252 WRKDPE 257
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 330 DIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVR 388
++ E S +F L G W LN VAIKT+ G +SEEDF + + +
Sbjct: 9 ELTFVQEIGSGQFGLVHLGYW-------LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 61
Query: 389 HPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHE 446
HP LV + G C E C+V E+M +G L D L R + A L + + +
Sbjct: 62 HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLD 112
Query: 447 VCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VC G+++L E ++H L + L+ N V K+S G+
Sbjct: 113 VCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMT 151
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 197 CFGEVWMGTWNGT---TRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 253
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 254 IYIVTEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 302
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 363 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 418
Query: 557 LSADQD 562
D +
Sbjct: 419 WRKDPE 424
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 22/167 (13%)
Query: 325 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSF 383
E E+I L E S +F + G W Y VA+K + G +SE++F +
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQY-------DVAVKMIKEGSMSEDEFFQEAQT 56
Query: 384 LTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
+ + HP LV G CS+ IV EY+ NG L + L S + L +
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL---------RSHGKGLEPSQLL 107
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ ++VC G++FL S + +H L + L+DR+L K+S G+
Sbjct: 108 EMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 30 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 196 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 557 LSADQD 562
D +
Sbjct: 252 WRKDPE 257
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 21 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 77
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 78 IYIVTEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 126
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 187 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 242
Query: 557 LSADQD 562
D +
Sbjct: 243 WRKDPE 248
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 19 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 75
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 76 IYIVTEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 124
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 185 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 240
Query: 557 LSADQD 562
D +
Sbjct: 241 WRKDPE 246
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 30 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 196 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 557 LSADQD 562
D +
Sbjct: 252 WRKDPE 257
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 348 GDWTNVYRGRL--NHASVAIKTLNNGLSE---------EDFQAKVSFLTAVRHPHLVAVM 396
G + V++GRL + + VAIK+L G SE ++FQ +V ++ + HP++V +
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 397 GCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
G +V E++P G+L +L +A ++W ++ + ++ LG+ ++ +
Sbjct: 90 GLMHNPPRMVMEFVPCGDLYHRLL---------DKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 457 TEPRPIVHGSLTPSSIL---LDRN--LVAKISGLGLN 488
P PIVH L +I LD N + AK++ GL+
Sbjct: 141 QNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 30 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 87 IYIVCEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 196 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 557 LSADQD 562
D +
Sbjct: 252 WRKDPE 257
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 97/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 30 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G L D L Y LR + +A ++ G++++
Sbjct: 87 IYIVMEYMSKGCLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 196 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 557 LSADQD 562
D +
Sbjct: 252 WRKDPE 257
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 96/240 (40%), Gaps = 47/240 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 279 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 335
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 336 IYIVTEYMSKGSLLDFLKGETGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 384
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 445 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 500
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 44/244 (18%)
Query: 348 GDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELKC- 404
G + V+ G N + VAIKTL G +S E F + + ++H LV + SE
Sbjct: 20 GQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIY 79
Query: 405 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVH 464
IV EYM G+L D L + RAL+ + + +A +V G++++ +H
Sbjct: 80 IVTEYMNKGSLLDFLKDGE--------GRALKLPNLVDMAAQVAAGMAYIERMN---YIH 128
Query: 465 GSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVRSD 498
L ++IL+ L+ KI+ GL + + ++SD
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 499 IRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLS 558
+ +FG LL L+T G V ++ L QV G P D L + + C
Sbjct: 189 VWSFGILLTELVT----KGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWK 244
Query: 559 ADQD 562
D +
Sbjct: 245 KDPE 248
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 121/285 (42%), Gaps = 53/285 (18%)
Query: 323 FREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHAS-VAIKTLNNGLS---EEDFQ 378
+ ++ ++++A+++F + + G + VY+GRL VA+K L + E FQ
Sbjct: 17 LKRFSLRELQVASDNFXNK-NILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 379 AKVSFLTAVRHPHLVAVMGCC--SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARA-- 434
+V ++ H +L+ + G C + +V+ YM NG++ +C R R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV-----------ASCLRERPES 124
Query: 435 ---LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL-NIC 490
L W R IA GL++LH I+H + ++ILLD A + GL +
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 491 DQLNV-------------------------RSDIRAFGTLLLHLLTGRNWAGLVEKAMAL 525
D + ++D+ +G +LL L+TG+ L +A
Sbjct: 185 DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR--LAN 242
Query: 526 DQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIA 570
D ++ LD G+ E L + L+ D++ + +++A
Sbjct: 243 DDDVML--LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVA 285
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 46/214 (21%)
Query: 346 CAGDWTNVYRGRLNHAS-VAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ V+ G N + VAIKTL G +S E F + + +RH LV + SE
Sbjct: 23 CFGE---VWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 79
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 80 IYIVTEYMSKGSLLDFLKGETGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 128
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 497 SDIRAFGTLLLHLLT-GR-NWAGLVEKAMALDQT 528
SD+ +FG LL L T GR + G+V + + LDQ
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPGMVNREV-LDQV 221
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 46/214 (21%)
Query: 346 CAGDWTNVYRGRLNHAS-VAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ V+ G N + VAIKTL G +S E F + + +RH LV + SE
Sbjct: 20 CFGE---VWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 76
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 77 IXIVTEYMSKGSLLDFLKGETGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 125
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 497 SDIRAFGTLLLHLLT-GR-NWAGLVEKAMALDQT 528
SD+ +FG LL L T GR + G+V + + LDQ
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNREV-LDQV 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 42/233 (18%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ N H VA+KT+ G +S E F A+ + + ++H LV + + E
Sbjct: 192 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI 251
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ E+M G+L D L + + + + + I + ++ G++F+ E R +
Sbjct: 252 YIITEFMAKGSLLDFLKSDEGSKQPLPKL--------IDFSAQIAEGMAFI---EQRNYI 300
Query: 464 HGSLTPSSILLDRNLVAKISGLGLNICD----------------QLNVRSDIRAFGTLLL 507
H L ++IL+ +LV KI+ GL ++SD+ +FG LL+
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 360
Query: 508 HLLT-GR-NWAGL--VEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
++T GR + G+ E AL++ M P + EEL I ++C
Sbjct: 361 EIVTYGRIPYPGMSNPEVIRALERGYRMPR--------PENCPEELYNIMMRC 405
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 96/240 (40%), Gaps = 47/240 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 196 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 252
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 253 IYIVTEYMSKGSLLDFLKGETGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 301
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 362 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 96/240 (40%), Gaps = 47/240 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 196 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 252
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 253 IYIVTEYMSKGSLLDFLKGETGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 301
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 362 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 97/246 (39%), Gaps = 47/246 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 30 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G L D L Y LR + +A ++ G++++
Sbjct: 87 IYIVTEYMSKGCLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 196 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 557 LSADQD 562
D +
Sbjct: 252 WRKDPE 257
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 23 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 83 PFYIIIEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 131
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 24 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 84 PFYIIIEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 132
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 193 KSDVWAFGVLLWEIAT 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 96/240 (40%), Gaps = 47/240 (19%)
Query: 346 CAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ W + G VAIKTL G +S E F + + +RH LV + SE
Sbjct: 196 CFGEVWMGTWNGT---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 252
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + +A ++ G++++
Sbjct: 253 IYIVGEYMSKGSLLDFLKGETGKY--------LRLPQLVDMAAQIASGMAYVERMN---Y 301
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 497 SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 556
SD+ +FG LL L T G V +++ L QV G P + E L + +C
Sbjct: 362 SDVWSFGILLTELTT----KGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 23 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 83 PFYIIIEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 131
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 21 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 81 PFYIIIEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 129
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 26/155 (16%)
Query: 348 GDWTNVYRGRL--NHASVAIKTLNNGLSE---------EDFQAKVSFLTAVRHPHLVAVM 396
G + V++GRL + + VAIK+L G SE ++FQ +V ++ + HP++V +
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 397 GCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
G +V E++P G+L +L +A ++W ++ + ++ LG+ ++ +
Sbjct: 90 GLMHNPPRMVMEFVPCGDLYHRLL---------DKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 457 TEPRPIVHGSLTPSSIL---LDRN--LVAKISGLG 486
P PIVH L +I LD N + AK++ G
Sbjct: 141 QNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 28 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 88 PFYIIIEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 136
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVF 407
G + V + + VAIK + + + F ++ L+ V HP++V + G C C+V
Sbjct: 19 GAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVM 78
Query: 408 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCL----GLSFLHSTEPRPIV 463
EY G+L + L ++ + A A+ W CL G+++LHS +P+ ++
Sbjct: 79 EYAEGGSLYNVLHGAE-PLPYYTAAHAMSW----------CLQCSQGVAYLHSMQPKALI 127
Query: 464 HGSLTPSSILL-DRNLVAKISGLGLNICD-QLNVRSDIRAFGTLLLHLLTGRNWAGLVEK 521
H L P ++LL V KI G CD Q ++ ++ + + + G N++ EK
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFG-TACDIQTHMTNNKGSAAWMAPEVFEGSNYS---EK 183
Query: 522 AMALDQ-TTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 580
L +V+ P D E+ G A + + A + R I + K ++ +
Sbjct: 184 CDVFSWGIILWEVITRRK---PFD---EIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237
Query: 581 KK 582
+
Sbjct: 238 TR 239
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 25 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 85 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 133
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 194 KSDVWAFGVLLWEIAT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 21 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 81 PFYIITEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 129
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 21/148 (14%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVF 407
G + V + + VAIK + + + F ++ L+ V HP++V + G C C+V
Sbjct: 20 GAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVM 79
Query: 408 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCL----GLSFLHSTEPRPIV 463
EY G+L + L ++ + A A+ W CL G+++LHS +P+ ++
Sbjct: 80 EYAEGGSLYNVLHGAE-PLPYYTAAHAMSW----------CLQCSQGVAYLHSMQPKALI 128
Query: 464 HGSLTPSSILLDRNLVAKISGLGLNICD 491
H L P ++L LVA G L ICD
Sbjct: 129 HRDLKPPNLL----LVA--GGTVLKICD 150
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 24 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 84 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 132
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 193 KSDVWAFGVLLWEIAT 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 36 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 95
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 96 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 144
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 205 KSDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 28 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 88 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 136
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 28 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 88 PFYIITEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 136
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 25 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 85 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 133
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 194 KSDVWAFGVLLWEIAT 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 23 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 83 PFYIITEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 131
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 25 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 85 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 133
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 194 KSDVWAFGVLLWEIAT 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 23 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 83 PFYIITEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 131
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 21/138 (15%)
Query: 348 GDWTNVYRGRL--NHASVAIKTLNNGLSE---------EDFQAKVSFLTAVRHPHLVAVM 396
G + V++GRL + + VAIK+L G SE ++FQ +V ++ + HP++V +
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 397 GCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
G +V E++P G+L +L +A ++W ++ + ++ LG+ ++ +
Sbjct: 90 GLMHNPPRMVMEFVPCGDLYHRLL---------DKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 457 TEPRPIVHGSLTPSSILL 474
P PIVH L +I L
Sbjct: 141 QNP-PIVHRDLRSPNIFL 157
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 21 GGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 81 PFYIITEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 129
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 28 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 88 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 136
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 46/214 (21%)
Query: 346 CAGDWTNVYRGRLNHAS-VAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ V+ G N + VAIKTL G +S E F + + +RH LV + SE
Sbjct: 27 CFGE---VWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 83
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + ++ ++ G++++
Sbjct: 84 IYIVTEYMNKGSLLDFLKGETGKY--------LRLPQLVDMSAQIASGMAYVERMN---Y 132
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 497 SDIRAFGTLLLHLLT-GR-NWAGLVEKAMALDQT 528
SD+ +FG LL L T GR + G+V + + LDQ
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREV-LDQV 225
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 46/214 (21%)
Query: 346 CAGDWTNVYRGRLNHAS-VAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
C G+ V+ G N + VAIKTL G +S E F + + +RH LV + SE
Sbjct: 27 CFGE---VWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 83
Query: 404 C-IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
IV EYM G+L D L Y LR + ++ ++ G++++
Sbjct: 84 IYIVTEYMNKGSLLDFLKGETGKY--------LRLPQLVDMSAQIASGMAYVERMN---Y 132
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNVR 496
VH L ++IL+ NLV K++ GL + + ++
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 497 SDIRAFGTLLLHLLT-GR-NWAGLVEKAMALDQT 528
SD+ +FG LL L T GR + G+V + + LDQ
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREV-LDQV 225
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 27 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 86
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 87 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 135
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 196 KSDVWAFGVLLWEIAT 211
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 28 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 88 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 136
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 23 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 83 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 131
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 23 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 83 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 131
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H L + L+ N + K++ GL+ ++ ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 230 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 290 PFYIITEFMTYGNLLDYL-------RECNR-QEVSAVVLLYMATQISSAMEYL---EKKN 338
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H +L + L+ N + K++ GL+ ++ ++
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 399 KSDVWAFGVLLWEIAT 414
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 227 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 286
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 287 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 335
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H +L + L+ N + K++ GL+ ++ ++
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 396 KSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 42/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS--VAIKTLNNGLSE-EDFQAKVSFLTAVRHPHLVAVMGCCSELK 403
G + VY G S VA+KTL E E+F + + + ++HP+LV ++G C+
Sbjct: 269 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 328
Query: 404 --CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
I+ E+M GNL D L + C+R + + + +++A ++ + +L E +
Sbjct: 329 PFYIITEFMTYGNLLDYL-------RECNR-QEVNAVVLLYMATQISSAMEYL---EKKN 377
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--------------------------ICDQLNV 495
+H +L + L+ N + K++ GL+ ++ ++
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ AFG LL + T
Sbjct: 438 KSDVWAFGVLLWEIAT 453
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 30/181 (16%)
Query: 326 YAAEDIRLATEDFSERFRLKC--------AGDWTNVYRGRLN-----HASVAIKTLNNGL 372
+ ED A +F++ C AG++ V GRL VAIKTL G
Sbjct: 3 HTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGY 62
Query: 373 SEE---DFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYK 427
+E+ DF + S + HP+++ + G ++ K IV EYM NG+L L + +
Sbjct: 63 TEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT 122
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
LR + G+ +L VH L +IL++ NLV K+S GL
Sbjct: 123 VIQLVGMLR---------GISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGL 170
Query: 488 N 488
+
Sbjct: 171 S 171
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK---C 404
G++ +V G VA+K + N + + F A+ S +T +RH +LV ++G E K
Sbjct: 32 GEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 91
Query: 405 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLD-RIHIAHEVCLGLSFLHSTEPRPIV 463
IV EYM G+L D L SR R++ D + + +VC + +L E V
Sbjct: 92 IVTEYMAKGSLVDYL---------RSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFV 139
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN 488
H L ++L+ + VAK+S GL
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 322 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEE---DFQ 378
F + + IR E + L C D TN G + VA+K L G + +Q
Sbjct: 4 VFHKRYLKKIRDLGEGHFGKVSLYCY-DPTNDGTGEM----VAVKALKEGCGPQLRSGWQ 58
Query: 379 AKVSFLTAVRHPHLVAVMGCCSELK----CIVFEYMPNGNLRDKLFTSQRNYKNCSRARA 434
++ L + H H+V GCC + +V EY+P G+LRD L ++C
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP------RHCVGLAQ 112
Query: 435 LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
L + A ++C G+++LH+ +H +L ++LLD + + KI GL
Sbjct: 113 L-----LLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGL 157
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 322 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEE---DFQ 378
F + + IR E + L C D TN G + VA+K L G + +Q
Sbjct: 5 VFHKRYLKKIRDLGEGHFGKVSLYCY-DPTNDGTGEM----VAVKALKEGCGPQLRSGWQ 59
Query: 379 AKVSFLTAVRHPHLVAVMGCCSELK----CIVFEYMPNGNLRDKLFTSQRNYKNCSRARA 434
++ L + H H+V GCC + +V EY+P G+LRD L ++C
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP------RHCVGLAQ 113
Query: 435 LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
L + A ++C G+++LH+ +H +L ++LLD + + KI GL
Sbjct: 114 L-----LLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGL 158
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK---C 404
G++ +V G VA+K + N + + F A+ S +T +RH +LV ++G E K
Sbjct: 204 GEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 263
Query: 405 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLD-RIHIAHEVCLGLSFLHSTEPRPIV 463
IV EYM G+L D L SR R++ D + + +VC + +L E V
Sbjct: 264 IVTEYMAKGSLVDYLR---------SRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFV 311
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN 488
H L ++L+ + VAK+S GL
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK---C 404
G++ +V G VA+K + N + + F A+ S +T +RH +LV ++G E K
Sbjct: 17 GEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 76
Query: 405 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLD-RIHIAHEVCLGLSFLHSTEPRPIV 463
IV EYM G+L D L SR R++ D + + +VC + +L E V
Sbjct: 77 IVTEYMAKGSLVDYLR---------SRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFV 124
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN 488
H L ++L+ + VAK+S GL
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK---C 404
G++ +V G VA+K + N + + F A+ S +T +RH +LV ++G E K
Sbjct: 23 GEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 82
Query: 405 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLD-RIHIAHEVCLGLSFLHSTEPRPIV 463
IV EYM G+L D L SR R++ D + + +VC + +L E V
Sbjct: 83 IVTEYMAKGSLVDYLR---------SRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFV 130
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN 488
H L ++L+ + VAK+S GL
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 55/243 (22%)
Query: 363 VAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRD 417
VA+K L S + DFQ + + + +P++V ++G C+ K C++FEYM G+L +
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL-N 138
Query: 418 KLFTSQRNYKNCS--------RARA-------LRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
+ S + CS RAR L +++ IA +V G+++L R
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKF 195
Query: 463 VHGSLTPSSILLDRNLVAKISGLGL--NIC----------DQLNVR-------------- 496
VH L + L+ N+V KI+ GL NI D + +R
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTT 255
Query: 497 -SDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALK 555
SD+ A+G +L + + GL + + V DGN P + EL +
Sbjct: 256 ESDVWAYGVVLWEIFS----YGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRL 311
Query: 556 CLS 558
C S
Sbjct: 312 CWS 314
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 52/243 (21%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ N H VA+KT+ G +S E F A+ + + ++H LV + + E
Sbjct: 198 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI 257
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ E+M G+L D L + + + + + I + ++ G++F+ E R +
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKL--------IDFSAQIAEGMAFI---EQRNYI 306
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ +LV KI+ GL I D ++S
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 498 DIRAFGTLLLHLLT-GR-NWAGL--VEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIA 553
D+ +FG LL+ ++T GR + G+ E AL++ M P + EEL I
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--------PENCPEELYNIM 418
Query: 554 LKC 556
++C
Sbjct: 419 MRC 421
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 166 MG---FVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 52/243 (21%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ N H VA+KT+ G +S E F A+ + + ++H LV + + E
Sbjct: 25 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI 84
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ E+M G+L D L + + + + + I + ++ G++F+ E R +
Sbjct: 85 YIITEFMAKGSLLDFLKSDEGSKQPLPKL--------IDFSAQIAEGMAFI---EQRNYI 133
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ +LV KI+ GL I D ++S
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 498 DIRAFGTLLLHLLT-GR-NWAGL--VEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIA 553
D+ +FG LL+ ++T GR + G+ E AL++ M P + EEL I
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--------PENCPEELYNIM 245
Query: 554 LKC 556
++C
Sbjct: 246 MRC 248
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 26 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 85
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 86 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 136
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 137 MG---YVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 43 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 102
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 103 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 153
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 154 MG---YVHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 53 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 112
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 113 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 163
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 164 MG---YVHRDLAARNILINSNLVCKVSDFGLS 192
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
VH L +IL++ NLV K+S GL
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV EYM NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLG 194
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 41/197 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 28 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 87
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 88 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 136
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 498 DIRAFGTLLLHLLT-GR 513
D+ +FG LL ++T GR
Sbjct: 197 DVWSFGILLTEIVTHGR 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 341 RFRLKCAGDWTNVYRGRLNHAS------VAIKTLNNGLSEE---DFQAKVSFLTAVRHPH 391
R ++ AG++ VY+G L +S VAIKTL G +E+ DF + + H +
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 392 LVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCL 449
++ + G S+ K I+ EYM NG L DK + + L + + +
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSV--------LQLVGMLRGIAA 158
Query: 450 GLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
G+ +L + VH L +IL++ NLV K+S GL+
Sbjct: 159 GMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLS 194
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 29 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 88
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 89 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 137
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 198 DVWSFGILLTEIVT 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 41/197 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 29 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 88
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 89 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 137
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 498 DIRAFGTLLLHLLT-GR 513
D+ +FG LL ++T GR
Sbjct: 198 DVWSFGILLTEIVTHGR 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 31 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 90
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 91 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 139
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 200 DVWSFGILLTEIVT 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 24 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 83
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 84 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 132
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 193 DVWSFGILLTEIVT 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 82
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 131
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 82
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 131
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 33 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 92
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 93 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 141
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 202 DVWSFGILLTEIVT 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 32 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 91
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 92 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 140
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 201 DVWSFGILLTEIVT 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 25 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 84
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 85 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 133
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 194 DVWSFGILLTEIVT 207
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 82
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 131
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 43/213 (20%)
Query: 328 AEDIRLATEDFSERFRLKCAGD-WTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLT 385
A ++ T ER AG+ W Y G H VA+K+L G +S + F A+ + +
Sbjct: 7 AWEVPRETLKLVERLGAGQAGEVWMGYYNG---HTKVAVKSLKQGSMSPDAFLAEANLMK 63
Query: 386 AVRHPHLVAVMGCCS-ELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIA 444
++H LV + + E I+ EYM NG+L D L T ++ + +A
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMA 115
Query: 445 HEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN--ICD----------- 491
++ G++F+ E R +H L ++IL+ L KI+ GL I D
Sbjct: 116 AQIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF 172
Query: 492 -------------QLNVRSDIRAFGTLLLHLLT 511
++SD+ +FG LL ++T
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 18 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 77
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 78 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 126
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H L ++IL+ L KI+ GL I D ++S
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 187 DVWSFGILLTEIVT 200
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 40/194 (20%)
Query: 347 AGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS-ELK 403
AG + V+ G N H VA+K+L G +S + F A+ + + ++H LV + + E
Sbjct: 19 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 78
Query: 404 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
I+ EYM NG+L D L T ++ + +A ++ G++F+ E R +
Sbjct: 79 YIITEYMENGSLVDFLKTPSGIKLTINKL--------LDMAAQIAEGMAFI---EERNYI 127
Query: 464 HGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNVRS 497
H +L ++IL+ L KI+ GL I D ++S
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 498 DIRAFGTLLLHLLT 511
D+ +FG LL ++T
Sbjct: 188 DVWSFGILLTEIVT 201
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 343 RLKCAGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVA 394
++ +GD V GRL VAIK L G +E DF ++ S + HP+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 395 VMGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLS 452
+ G + L IV EYM NG+L L T + LR V G+
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---------GVGAGMR 165
Query: 453 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+L VH L ++L+D NLV K+S GL+
Sbjct: 166 YLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 343 RLKCAGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVA 394
++ +GD V GRL VAIK L G +E DF ++ S + HP+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 395 VMGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLS 452
+ G + L IV EYM NG+L L T + LR V G+
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---------GVGAGMR 165
Query: 453 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+L VH L ++L+D NLV K+S GL+
Sbjct: 166 YLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 30/181 (16%)
Query: 326 YAAEDIRLATEDFSERFRLKC--------AGDWTNVYRGRLNHAS-----VAIKTLNNGL 372
+ ED A +F++ + C AG++ V G L VAIKTL +G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 373 SEE---DFQAKVSFLTAVRHPHLVAVMGCC--SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
+E+ DF ++ S + HP+++ + G S I+ E+M NG+L L + +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
LR + G+ +L VH L +IL++ NLV K+S GL
Sbjct: 134 VIQLVGMLR---------GIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGL 181
Query: 488 N 488
+
Sbjct: 182 S 182
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 30/178 (16%)
Query: 329 EDIRLATEDFSERFRLKC--------AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE 375
ED A F++ C AG++ V GRL +VAIKTL G +E+
Sbjct: 27 EDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK 86
Query: 376 ---DFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCS 430
DF + S + HP++V + G + K IV E+M NG L L +
Sbjct: 87 QRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQ 146
Query: 431 RARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
LR + G+ +L VH L +IL++ NLV K+S GL+
Sbjct: 147 LVGMLR---------GIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLS 192
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 326 YAAEDIRLATEDFSERFRLKC--------AGDWTNVYRGRLN-----HASVAIKTLNNGL 372
+ ED A +F++ C G++ V GRL VAIKTL G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 373 SEE---DFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYK 427
+++ DF ++ S + HP+++ + G ++ K I+ EYM NG+L L K
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL------RK 123
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
N R ++ + + + G+ +L VH L +IL++ NLV K+S G+
Sbjct: 124 NDGRFTVIQL---VGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGM 177
Query: 488 N 488
+
Sbjct: 178 S 178
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 61/277 (22%)
Query: 355 RGRLNHASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 409
+GR + +VA+K L S D ++ + L V HPH++ + G CS+ ++ EY
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 410 MPNGNLRDKLFTSQR---NYKNCSRA-----------RALRWLDRIHIAHEVCLGLSFLH 455
G+LR L S++ Y + RAL D I A ++ G+ +L
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 456 STEPRPIVHGSLTPSSILLDRNLVAKISGLGL--------------------------NI 489
+ +VH L +IL+ KIS GL ++
Sbjct: 168 EMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESL 224
Query: 490 CDQL-NVRSDIRAFGTLLLHLLT--GRNWAGL-VEKAMALDQTTLMQVLDGNAGIWPLDL 545
D + +SD+ +FG LL ++T G + G+ E+ L +T G+ P +
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT-------GHRMERPDNC 277
Query: 546 AEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 582
+EE+ + L+C Q+ ++ A + K+L+++ K
Sbjct: 278 SEEMYRLMLQCWK--QEPDKRPVFADISKDLEKMMVK 312
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 61/277 (22%)
Query: 355 RGRLNHASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 409
+GR + +VA+K L S D ++ + L V HPH++ + G CS+ ++ EY
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 410 MPNGNLRDKLFTSQR--------------NYKNCSRARALRWLDRIHIAHEVCLGLSFLH 455
G+LR L S++ + + RAL D I A ++ G+ +L
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 456 STEPRPIVHGSLTPSSILLDRNLVAKISGLGL--------------------------NI 489
+ +VH L +IL+ KIS GL ++
Sbjct: 168 EMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL 224
Query: 490 CDQL-NVRSDIRAFGTLLLHLLT--GRNWAGL-VEKAMALDQTTLMQVLDGNAGIWPLDL 545
D + +SD+ +FG LL ++T G + G+ E+ L +T G+ P +
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT-------GHRMERPDNC 277
Query: 546 AEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 582
+EE+ + L+C Q+ ++ A + K+L+++ K
Sbjct: 278 SEEMYRLMLQCWK--QEPDKRPVFADISKDLEKMMVK 312
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 20/138 (14%)
Query: 363 VAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR-- 416
VA+KTL + + +DF + LT ++H H+V G C E +VFEYM +G+L
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 417 ------DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPS 470
D + ++ N L +HIA ++ G+ +L S VH L
Sbjct: 106 LRAHGPDAVLMAEGN-----PPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATR 157
Query: 471 SILLDRNLVAKISGLGLN 488
+ L+ NL+ KI G++
Sbjct: 158 NCLVGENLLVKIGDFGMS 175
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 61/277 (22%)
Query: 355 RGRLNHASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 409
+GR + +VA+K L S D ++ + L V HPH++ + G CS+ ++ EY
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 410 MPNGNLRDKLFTSQR---NYKNCSRA-----------RALRWLDRIHIAHEVCLGLSFLH 455
G+LR L S++ Y + RAL D I A ++ G+ +L
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 456 STEPRPIVHGSLTPSSILLDRNLVAKISGLGL--------------------------NI 489
+VH L +IL+ KIS GL ++
Sbjct: 168 EMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESL 224
Query: 490 CDQL-NVRSDIRAFGTLLLHLLT--GRNWAGL-VEKAMALDQTTLMQVLDGNAGIWPLDL 545
D + +SD+ +FG LL ++T G + G+ E+ L +T G+ P +
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT-------GHRMERPDNC 277
Query: 546 AEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 582
+EE+ + L+C Q+ ++ A + K+L+++ K
Sbjct: 278 SEEMYRLMLQCWK--QEPDKRPVFADISKDLEKMMVK 312
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 26 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 85
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV E M NG+L L + LR + G+ +L
Sbjct: 86 VTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 136
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 137 MG---YVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV E M NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V GRL SVAIKTL G +E+ DF + S + HP+++ + G
Sbjct: 55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K IV E M NG+L L + LR + G+ +L
Sbjct: 115 VTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---------GIASGMKYLSD 165
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 166 MGA---VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 26/186 (13%)
Query: 309 AIGMVIRSSELSCAFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTL 368
A+ ++ + F + + IR E + L C D TN G + VA+K L
Sbjct: 14 ALEVLFQGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCY-DPTNDGTGEM----VAVKAL 68
Query: 369 NNGLSEE---DFQAKVSFLTAVRHPHLVAVMGCCSELKC----IVFEYMPNGNLRDKLFT 421
+ ++ ++ L + H H++ GCC + +V EY+P G+LRD L
Sbjct: 69 KADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-- 126
Query: 422 SQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 481
++ + A ++C G+++LH+ +H L ++LLD + + K
Sbjct: 127 ---------PRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVK 174
Query: 482 ISGLGL 487
I GL
Sbjct: 175 IGDFGL 180
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 322 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEE---DFQ 378
F + + IR E + L C D TN G + VA+K L + ++
Sbjct: 10 VFHKRYLKKIRDLGEGHFGKVSLYCY-DPTNDGTGEM----VAVKALKADCGPQHRSGWK 64
Query: 379 AKVSFLTAVRHPHLVAVMGCCSELK----CIVFEYMPNGNLRDKLFTSQRNYKNCSRARA 434
++ L + H H++ GCC + +V EY+P G+LRD L +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----------PRHS 113
Query: 435 LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ + A ++C G+++LHS +H +L ++LLD + + KI GL
Sbjct: 114 IGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGL 163
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 322 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLN-----HASVAIKTLNNGLSEE- 375
A RE+A E I ++ E + AG++ V RGRL + VAIKTL G +E
Sbjct: 5 AVREFAKE-IDVSYVKIEE---VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 376 --DFQAKVSFLTAVRHPHLVAVMGCC--SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSR 431
+F ++ S + HP+++ + G S I+ E+M NG L L + +
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL 120
Query: 432 ARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
LR + G+ +L VH L +IL++ NLV K+S GL+
Sbjct: 121 VGMLR---------GIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
G++ V GRL VAIKTL G +++ DF ++ S + HP+++ + G
Sbjct: 24 VGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGV 83
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K I+ EYM NG+L L KN R ++ + + + G+ +L
Sbjct: 84 VTKCKPVMIITEYMENGSLDAFL------RKNDGRFTVIQL---VGMLRGIGSGMKYLSD 134
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S G++
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGMS 163
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V RGRL + VAIKTL G +E +F ++ S + HP+++ + G
Sbjct: 24 AGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGV 83
Query: 399 C--SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
S I+ E+M NG L L + + LR + G+ +L
Sbjct: 84 VTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---------GIASGMRYLAE 134
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S GL+
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLN-----HASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
G++ V GRL VAIKTL G +++ DF ++ S + HP+++ + G
Sbjct: 18 VGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGV 77
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ K I+ EYM NG+L L KN R ++ + + + G+ +L
Sbjct: 78 VTKCKPVMIITEYMENGSLDAFL------RKNDGRFTVIQ---LVGMLRGIGSGMKYLSD 128
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH L +IL++ NLV K+S G++
Sbjct: 129 MS---YVHRDLAARNILVNSNLVCKVSDFGMS 157
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 384 LTAVRHPHLVAVMGCCSELKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
L+ V HP ++ + G + + I + +Y+ G L L SQR ++
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAK---------- 109
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
A EVCL L +LHS + I++ L P +ILLD+N KI+ G
Sbjct: 110 FYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGF 152
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 322 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEE---DFQ 378
F + + IR E + L C D TN G + VA+K L + ++
Sbjct: 10 VFHKRYLKKIRDLGEGHFGKVSLYCY-DPTNDGTGEM----VAVKALKADCGPQHRSGWK 64
Query: 379 AKVSFLTAVRHPHLVAVMGCCSELK----CIVFEYMPNGNLRDKLFTSQRNYKNCSRARA 434
++ L + H H++ GCC + +V EY+P G+LRD L +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----------PRHS 113
Query: 435 LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ + A ++C G+++LH+ +H +L ++LLD + + KI GL
Sbjct: 114 IGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGL 163
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 22/152 (14%)
Query: 347 AGDWTNVYRGRLNHAS-----VAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGC 398
AG++ V G L VAIKTL +G +E+ DF ++ S + HP+++ + G
Sbjct: 17 AGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGV 76
Query: 399 CSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
++ I+ E+M NG+L L + + LR + G+ +L
Sbjct: 77 VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---------GIAAGMKYLAD 127
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
VH +L +IL++ NLV K+S GL+
Sbjct: 128 MN---YVHRALAARNILVNSNLVCKVSDFGLS 156
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 48/202 (23%)
Query: 347 AGDWTNVYRGRLNHASVAIKTLN-NGLSEEDFQA---KVSFLTAVRHPHLVAVMGCCSEL 402
+G + VY+G+ H VA+K LN + + QA +V L RH +++ MG ++
Sbjct: 34 SGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP 92
Query: 403 K-CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
+ IV ++ +L L S+ ++ + L I IA + G+ +LH+ +
Sbjct: 93 QLAIVTQWCEGSSLYHHLHASETKFE----MKKL-----IDIARQTARGMDYLHA---KS 140
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLNI------------------------------CD 491
I+H L ++I L + KI GL +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 492 QLNVRSDIRAFGTLLLHLLTGR 513
+ +SD+ AFG +L L+TG+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 363 VAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLR-- 416
VA+K L + + +DFQ + LT ++H H+V G C + +VFEYM +G+L
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 417 ------DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPS 470
D + + L + +HIA ++ G+ +L S VH L
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQM--LHIASQIASGMVYLASQH---FVHRDLATR 162
Query: 471 SILLDRNLVAKISGLGLN 488
+ L+ NL+ KI G++
Sbjct: 163 NCLVGANLLVKIGDFGMS 180
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 363 VAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDK 418
VA+K L + +DFQ + LT ++H H+V G C+E + +VFEYM +G+L
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 419 LFTSQRNYKNCSRAR-----ALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 473
L + + K + L + +A +V G+ +L VH L + L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCL 190
Query: 474 LDRNLVAKISGLGLN 488
+ + LV KI G++
Sbjct: 191 VGQGLVVKIGDFGMS 205
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 131
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 132 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 179
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 180 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 239
Query: 508 HLLT 511
L T
Sbjct: 240 ELFT 243
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCS-----ELKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 101
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H +L +IL++
Sbjct: 102 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRNLATRNILVE 149
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 150 NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 209
Query: 508 HLLT 511
L T
Sbjct: 210 ELFT 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 48/202 (23%)
Query: 347 AGDWTNVYRGRLNHASVAIKTLN-NGLSEEDFQA---KVSFLTAVRHPHLVAVMGCCSEL 402
+G + VY+G+ H VA+K LN + + QA +V L RH +++ MG ++
Sbjct: 22 SGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP 80
Query: 403 K-CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
+ IV ++ +L L S+ ++ + L I IA + G+ +LH+ +
Sbjct: 81 QLAIVTQWCEGSSLYHHLHASETKFE----MKKL-----IDIARQTARGMDYLHA---KS 128
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLNIC----------DQLN----------------- 494
I+H L ++I L + KI GL +QL+
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 495 ---VRSDIRAFGTLLLHLLTGR 513
+SD+ AFG +L L+TG+
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCS-----ELKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 103
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 104 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 151
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 508 HLLT 511
L T
Sbjct: 212 ELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCS-----ELKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 107
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 108 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 155
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 156 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 215
Query: 508 HLLT 511
L T
Sbjct: 216 ELFT 219
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 363 VAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDK 418
VA+K L + +DFQ + LT ++H H+V G C+E + +VFEYM +G+L
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 419 LFTSQRNYKNCSRAR-----ALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 473
L + + K + L + +A +V G+ +L VH L + L
Sbjct: 111 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCL 167
Query: 474 LDRNLVAKISGLGLN 488
+ + LV KI G++
Sbjct: 168 VGQGLVVKIGDFGMS 182
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 363 VAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDK 418
VA+K L + +DFQ + LT ++H H+V G C+E + +VFEYM +G+L
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 419 LFTSQRNYKNCSRAR-----ALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 473
L + + K + L + +A +V G+ +L VH L + L
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCL 161
Query: 474 LDRNLVAKISGLGLN 488
+ + LV KI G++
Sbjct: 162 VGQGLVVKIGDFGMS 176
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 105
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 106 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 153
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 154 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 213
Query: 508 HLLT 511
L T
Sbjct: 214 ELFT 217
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 348 GDWTNVYRGRLNHASV----AIKTLNNGLSEED---FQAKVSFLTAV-RHPHLVAVMGCC 399
G++ V + R+ + AIK + S++D F ++ L + HP+++ ++G C
Sbjct: 36 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 95
Query: 400 SE--LKCIVFEYMPNGNLRDKLFTSQRNYKNC------SRARALRWLDRIHIAHEVCLGL 451
+ EY P+GNL D L S+ + S A L +H A +V G+
Sbjct: 96 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 155
Query: 452 SFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVR 496
+L + +H L +IL+ N VAKI+ GL+ ++ V+
Sbjct: 156 DYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 197
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 348 GDWTNVYRGRLNHASV----AIKTLNNGLSEED---FQAKVSFLTAV-RHPHLVAVMGCC 399
G++ V + R+ + AIK + S++D F ++ L + HP+++ ++G C
Sbjct: 33 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 92
Query: 400 SE--LKCIVFEYMPNGNLRDKLFTSQRNYKNC------SRARALRWLDRIHIAHEVCLGL 451
+ EY P+GNL D L S+ + S A L +H A +V G+
Sbjct: 93 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 152
Query: 452 SFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDI 499
+L + +H +L +IL+ N VAKI+ GL+ ++ V+ +
Sbjct: 153 DYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 197
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 106
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 107 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 154
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 155 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 214
Query: 508 HLLT 511
L T
Sbjct: 215 ELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 98
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 99 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 146
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 147 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 206
Query: 508 HLLT 511
L T
Sbjct: 207 ELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCS-----ELKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 100
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 101 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 148
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 508 HLLT 511
L T
Sbjct: 209 ELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCS-----ELKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 99
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 100 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 147
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 148 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 207
Query: 508 HLLT 511
L T
Sbjct: 208 ELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 100
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 101 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 148
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 508 HLLT 511
L T
Sbjct: 209 ELFT 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 48/202 (23%)
Query: 347 AGDWTNVYRGRLNHASVAIKTLN-NGLSEEDFQA---KVSFLTAVRHPHLVAVMGCCSEL 402
+G + VY+G+ H VA+K LN + + QA +V L RH +++ MG +
Sbjct: 34 SGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP 92
Query: 403 K-CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
+ IV ++ +L L S+ ++ + L I IA + G+ +LH+ +
Sbjct: 93 QLAIVTQWCEGSSLYHHLHASETKFE----MKKL-----IDIARQTARGMDYLHA---KS 140
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLNI------------------------------CD 491
I+H L ++I L + KI GL +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 492 QLNVRSDIRAFGTLLLHLLTGR 513
+ +SD+ AFG +L L+TG+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 100
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 101 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 148
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 508 HLLT 511
L T
Sbjct: 209 ELFT 212
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 348 GDWTNVYRGRLNHASV----AIKTLNNGLSEED---FQAKVSFLTAV-RHPHLVAVMGCC 399
G++ V + R+ + AIK + S++D F ++ L + HP+++ ++G C
Sbjct: 26 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 85
Query: 400 SE--LKCIVFEYMPNGNLRDKLFTSQRNYKNC------SRARALRWLDRIHIAHEVCLGL 451
+ EY P+GNL D L S+ + S A L +H A +V G+
Sbjct: 86 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 145
Query: 452 SFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVR 496
+L + +H L +IL+ N VAKI+ GL+ ++ V+
Sbjct: 146 DYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 187
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 104
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 105 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 152
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 153 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 212
Query: 508 HLLT 511
L T
Sbjct: 213 ELFT 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 353 VYRGRLNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCC----SELKC 404
+++GR + +K L + DF + L HP+++ V+G C +
Sbjct: 26 LWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85
Query: 405 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVH 464
++ +MP G+L + L + S+A + A ++ G++FLH+ EP I
Sbjct: 86 LITHWMPYGSLYNVLHEGTNFVVDQSQA--------VKFALDMARGMAFLHTLEPL-IPR 136
Query: 465 GSLTPSSILLDRNLVAKIS 483
+L S+++D ++ A+IS
Sbjct: 137 HALNSRSVMIDEDMTARIS 155
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCS-----ELKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 118
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 119 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 166
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 508 HLLT 511
L T
Sbjct: 227 ELFT 230
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 48/216 (22%)
Query: 325 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSF 383
E +D+ E + +F + G W RG+ + VAIK + G +SE++F +
Sbjct: 4 EIDPKDLTFLKELGTGQFGVVKYGKW----RGQYD---VAIKMIKEGSMSEDEFIEEAKV 56
Query: 384 LTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
+ + H LV + G C++ + I+ EYM NG L + L R ++ + + L +
Sbjct: 57 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQL-----L 107
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN------------- 488
+ +VC + +L E + +H L + L++ V K+S GL+
Sbjct: 108 EMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 164
Query: 489 -------------ICDQLNVRSDIRAFGTLLLHLLT 511
+ + + +SDI AFG L+ + +
Sbjct: 165 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 118
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 119 RDYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 166
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 508 HLLT 511
L T
Sbjct: 227 ELFT 230
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 48/216 (22%)
Query: 325 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSF 383
E +D+ E + +F + G W RG+ + VAIK + G +SE++F +
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKW----RGQYD---VAIKMIKEGSMSEDEFIEEAKV 57
Query: 384 LTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
+ + H LV + G C++ + I+ EYM NG L + L R ++ + + L +
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQL-----L 108
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN------------- 488
+ +VC + +L E + +H L + L++ V K+S GL+
Sbjct: 109 EMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG 165
Query: 489 -------------ICDQLNVRSDIRAFGTLLLHLLT 511
+ + + +SDI AFG L+ + +
Sbjct: 166 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 48/216 (22%)
Query: 325 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSF 383
E +D+ E + +F + G W RG+ + VAIK + G +SE++F +
Sbjct: 11 EIDPKDLTFLKELGTGQFGVVKYGKW----RGQYD---VAIKMIKEGSMSEDEFIEEAKV 63
Query: 384 LTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
+ + H LV + G C++ + I+ EYM NG L + L R ++ + + L +
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQL-----L 114
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN------------- 488
+ +VC + +L E + +H L + L++ V K+S GL+
Sbjct: 115 EMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 171
Query: 489 -------------ICDQLNVRSDIRAFGTLLLHLLT 511
+ + + +SDI AFG L+ + +
Sbjct: 172 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 48/216 (22%)
Query: 325 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSF 383
E +D+ E + +F + G W RG+ + VAIK + G +SE++F +
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKW----RGQYD---VAIKMIKEGSMSEDEFIEEAKV 72
Query: 384 LTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
+ + H LV + G C++ + I+ EYM NG L + L R ++ + + L +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQL-----L 123
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN------------- 488
+ +VC + +L S + +H L + L++ V K+S GL+
Sbjct: 124 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180
Query: 489 -------------ICDQLNVRSDIRAFGTLLLHLLT 511
+ + + +SDI AFG L+ + +
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 48/216 (22%)
Query: 325 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSF 383
E +D+ E + +F + G W RG+ + VAIK + G +SE++F +
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKW----RGQYD---VAIKMIKEGSMSEDEFIEEAKV 57
Query: 384 LTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
+ + H LV + G C++ + I+ EYM NG L + L R ++ + + L +
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQL-----L 108
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN------------- 488
+ +VC + +L E + +H L + L++ V K+S GL+
Sbjct: 109 EMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 165
Query: 489 -------------ICDQLNVRSDIRAFGTLLLHLLT 511
+ + + +SDI AFG L+ + +
Sbjct: 166 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query: 352 NVYRGRLNHASVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVFE 408
VYR R VAIK L G + E+ + + + +P++V ++G C ++
Sbjct: 29 GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM 88
Query: 409 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLT 468
M G K +R S L H+V +G+ +L E + VH L
Sbjct: 89 EMAGGGPLHKFLVGKREEIPVSNVAEL--------LHQVSMGMKYL---EEKNFVHRDLA 137
Query: 469 PSSILLDRNLVAKISGLGLN 488
++LL AKIS GL+
Sbjct: 138 ARNVLLVNRHYAKISDFGLS 157
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 48/212 (22%)
Query: 329 EDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSFLTAV 387
+D+ E + +F + G W RG+ + VAIK + G +SE++F + + +
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKW----RGQYD---VAIKMIKEGSMSEDEFIEEAKVMMNL 56
Query: 388 RHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAH 445
H LV + G C++ + I+ EYM NG L + L R ++ + + L + +
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQL-----LEMCK 107
Query: 446 EVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN----------------- 488
+VC + +L E + +H L + L++ V K+S GL+
Sbjct: 108 DVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 164
Query: 489 ---------ICDQLNVRSDIRAFGTLLLHLLT 511
+ + + +SDI AFG L+ + +
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ EY+P G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSL 103
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
RD L + A + + + ++C G+ +L + + +H L +IL++
Sbjct: 104 RDYL---------QAHAERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 151
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 508 HLLT 511
L T
Sbjct: 212 ELFT 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 48/216 (22%)
Query: 325 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LSEEDFQAKVSF 383
E +D+ E + +F + G W RG+ + VAIK + G +SE++F +
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKW----RGQYD---VAIKMIKEGSMSEDEFIEEAKV 72
Query: 384 LTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
+ + H LV + G C++ + I+ EYM NG L + L R ++ + + L +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQL-----L 123
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN------------- 488
+ +VC + +L S + +H L + L++ V K+S GL+
Sbjct: 124 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 489 -------------ICDQLNVRSDIRAFGTLLLHLLT 511
+ + + +SDI AFG L+ + +
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 29/183 (15%)
Query: 323 FREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNN---GL 372
+E + +R E +RF VY+G L +VAIKTL + G
Sbjct: 20 LKEISLSAVRFMEELGEDRF--------GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP 71
Query: 373 SEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCS 430
E+F+ + ++HP++V ++G ++ + ++F Y +G+L + L + S
Sbjct: 72 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 131
Query: 431 R------ARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 484
AL D +H+ ++ G+ +L S +VH L ++L+ L KIS
Sbjct: 132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISD 188
Query: 485 LGL 487
LGL
Sbjct: 189 LGL 191
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 29/183 (15%)
Query: 323 FREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNN---GL 372
+E + +R E +RF VY+G L +VAIKTL + G
Sbjct: 3 LKEISLSAVRFMEELGEDRF--------GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP 54
Query: 373 SEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCS 430
E+F+ + ++HP++V ++G ++ + ++F Y +G+L + L + S
Sbjct: 55 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 114
Query: 431 R------ARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 484
AL D +H+ ++ G+ +L S +VH L ++L+ L KIS
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISD 171
Query: 485 LGL 487
LGL
Sbjct: 172 LGL 174
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 43/196 (21%)
Query: 347 AGDWTNVYRGRLNHAS-VAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCS--EL 402
AG + V+ G N+++ VA+KTL G +S + F + + + ++H LV + + E
Sbjct: 23 AGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEP 82
Query: 403 KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDR-IHIAHEVCLGLSFLHSTEPRP 461
I+ EYM G+L D L K+ + L L + I + ++ G++++ E +
Sbjct: 83 IYIITEYMAKGSLLDFL-------KSDEGGKVL--LPKLIDFSAQIAEGMAYI---ERKN 130
Query: 462 IVHGSLTPSSILLDRNLVAKISGLGLN--ICDQ------------------------LNV 495
+H L +++L+ +L+ KI+ GL I D +
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 496 RSDIRAFGTLLLHLLT 511
+SD+ +FG LL ++T
Sbjct: 191 KSDVWSFGILLYEIVT 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 352 NVYRGRLNHASVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVFE 408
VYR R VAIK L G + E+ + + + +P++V ++G C ++
Sbjct: 355 GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM 414
Query: 409 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLT 468
M G K +R S L H+V +G+ +L E + VH +L
Sbjct: 415 EMAGGGPLHKFLVGKREEIPVSNVAEL--------LHQVSMGMKYL---EEKNFVHRNLA 463
Query: 469 PSSILLDRNLVAKISGLGLN 488
++LL AKIS GL+
Sbjct: 464 ARNVLLVNRHYAKISDFGLS 483
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 363 VAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCCSE-----LKCIVFEYMPNGNL 415
VA+K L + E DF+ ++ L +++H ++V G C LK I+ E++P G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EFLPYGSL 103
Query: 416 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 475
R+ L Q++ + + L++ ++C G+ +L + + +H L +IL++
Sbjct: 104 REYL---QKHKERIDHIKLLQY------TSQICKGMEYLGT---KRYIHRDLATRNILVE 151
Query: 476 RNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLL 507
KI GL + +V SD+ +FG +L
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 508 HLLT 511
L T
Sbjct: 212 ELFT 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 363 VAIKTLNNG-LSEEDFQAKV----SFLTAVRHPHLVAVMGCCSELKCIVFEYMPNGNLRD 417
VA+K +N L++ D Q ++ S+L +RHPH++ + I+ GN
Sbjct: 42 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN--- 98
Query: 418 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN 477
+LF S A R+ +I A E C H + IVH L P ++LLD +
Sbjct: 99 ELFDYIVQRDKMSEQEARRFFQQIISAVEYC------HRHK---IVHRDLKPENLLLDEH 149
Query: 478 LVAKISGLGLN 488
L KI+ GL+
Sbjct: 150 LNVKIADFGLS 160
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 363 VAIKTLNNG-LSEEDFQAKV----SFLTAVRHPHLVAVMGCCSELKCIVFEYMPNGNLRD 417
VA+K +N L++ D Q ++ S+L +RHPH++ + I+ GN
Sbjct: 36 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN--- 92
Query: 418 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN 477
+LF S A R+ +I A E C H + IVH L P ++LLD +
Sbjct: 93 ELFDYIVQRDKMSEQEARRFFQQIISAVEYC------HRHK---IVHRDLKPENLLLDEH 143
Query: 478 LVAKISGLGLN 488
L KI+ GL+
Sbjct: 144 LNVKIADFGLS 154
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 363 VAIKTLNNG-LSEEDFQAKV----SFLTAVRHPHLVAVMGCCSELKCIVFEYMPNGNLRD 417
VA+K +N L++ D Q ++ S+L +RHPH++ + I+ GN
Sbjct: 41 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN--- 97
Query: 418 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN 477
+LF S A R+ +I A E C H + IVH L P ++LLD +
Sbjct: 98 ELFDYIVQRDKMSEQEARRFFQQIISAVEYC------HRHK---IVHRDLKPENLLLDEH 148
Query: 478 LVAKISGLGLN 488
L KI+ GL+
Sbjct: 149 LNVKIADFGLS 159
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 363 VAIKTLNNG-LSEEDFQAKV----SFLTAVRHPHLVAVMGCCSELKCIVFEYMPNGNLRD 417
VA+K +N L++ D Q ++ S+L +RHPH++ + I+ GN
Sbjct: 32 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN--- 88
Query: 418 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN 477
+LF S A R+ +I A E C H + IVH L P ++LLD +
Sbjct: 89 ELFDYIVQRDKMSEQEARRFFQQIISAVEYC------HRHK---IVHRDLKPENLLLDEH 139
Query: 478 LVAKISGLGLN 488
L KI+ GL+
Sbjct: 140 LNVKIADFGLS 150
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 361 ASVAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCC-----SELKCIVFEYMPNG 413
A VA+K L + ++ DFQ ++ L A+ +V G EL+ +V EY+P+G
Sbjct: 37 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELR-LVMEYLPSG 95
Query: 414 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 473
LRD L QR+ +R L + + ++C G+ +L S R VH L +IL
Sbjct: 96 CLRDFL---QRHRARLDASRLLLY------SSQICKGMEYLGS---RRCVHRDLAARNIL 143
Query: 474 LDRNLVAKISGLGL 487
++ KI+ GL
Sbjct: 144 VESEAHVKIADFGL 157
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 50/204 (24%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSE------EDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G + VYR VA+K + E E+ + + ++HP+++A+ G C +
Sbjct: 18 GGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK 77
Query: 402 LK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
C+V E+ G L +++ + +R + ++ A ++ G+++LH
Sbjct: 78 EPNLCLVMEFARGGPL-NRVLSGKRIPPDI----------LVNWAVQIARGMNYLHDEAI 126
Query: 460 RPIVHGSLTPSSILLDR--------NLVAKISGLGLN----------------------- 488
PI+H L S+IL+ + N + KI+ GL
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 489 ICDQLNVRSDIRAFGTLLLHLLTG 512
+ SD+ ++G LL LLTG
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 331 IRLATEDFSERFRLKCAGDWTNVYRG------RLNHASVAIKTLNNGLSEE---DFQAKV 381
+R+ E +R ++ +G + VY+G VAIK LN + +F +
Sbjct: 9 LRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA 68
Query: 382 SFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDR 440
+ ++ HPHLV ++G C S +V + MP+G L + + + N L W
Sbjct: 69 LIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYV---HEHKDNIGSQLLLNWC-- 123
Query: 441 IHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ IA G+ +L E R +VH L ++L+ KI+ GL
Sbjct: 124 VQIAK----GMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGL 163
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 380 KVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRW 437
++S+L +RHPH++ + + +V EY G L D + +R ++ R R+
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGR----RF 113
Query: 438 LDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+I A E C H + IVH L P ++LLD NL KI+ GL+
Sbjct: 114 FQQIICAIEYC------HRHK---IVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 65/276 (23%)
Query: 348 GDWTNVYRG---------RLNHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAV 395
G +T +++G +L+ V +K L+ SE F+A S ++ + H HLV
Sbjct: 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHLVLN 77
Query: 396 MGC--CSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSF 453
G C + +V E++ G+L T + KNC + L ++ +A ++ + F
Sbjct: 78 YGVCFCGDENILVQEFVKFGSLD----TYLKKNKNC-----INILWKLEVAKQLAWAMHF 128
Query: 454 LHSTEPRPIVHGSLTPSSILLDRN--------LVAKISGLGLNIC--------------- 490
L E ++HG++ +ILL R K+S G++I
Sbjct: 129 L---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 491 -------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL 543
LN+ +D +FGT L + +G + + ALD +Q + + P
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGD-----KPLSALDSQRKLQFYEDRHQL-PA 239
Query: 544 DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 579
A ELA + C+ + D R ++++L+ +
Sbjct: 240 PKAAELANLINNCMDYEPDHRPSFR--AIIRDLNSL 273
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 331 IRLATEDFSERFRLKCAGDWTNVYRG------RLNHASVAIKTLNNGLSEE---DFQAKV 381
+R+ E +R ++ +G + VY+G VAIK LN + +F +
Sbjct: 32 LRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA 91
Query: 382 SFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDR 440
+ ++ HPHLV ++G C S +V + MP+G L + + + N L W
Sbjct: 92 LIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYV---HEHKDNIGSQLLLNWC-- 146
Query: 441 IHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ IA G+ +L E R +VH L ++L+ KI+ GL
Sbjct: 147 VQIAK----GMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGL 186
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 48/201 (23%)
Query: 348 GDWTNVYRGRLNHAS--VAIKTLNN------GLSEEDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VYR H VAIK ++ G+ + Q +V ++HP ++ +
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKHPSILELYNYF 80
Query: 400 --SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHST 457
S +V E NG + R KN R + + H H++ G+ +LHS
Sbjct: 81 EDSNYVYLVLEMCHNGEM-------NRYLKN--RVKPFSENEARHFMHQIITGMLYLHS- 130
Query: 458 EPRPIVHGSLTPSSILLDRNLVAKISGLGL------------NICDQLN----------- 494
I+H LT S++LL RN+ KI+ GL +C N
Sbjct: 131 --HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 495 --VRSDIRAFGTLLLHLLTGR 513
+ SD+ + G + LL GR
Sbjct: 189 HGLESDVWSLGCMFYTLLIGR 209
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 65/276 (23%)
Query: 348 GDWTNVYRG---------RLNHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAV 395
G +T +++G +L+ V +K L+ SE F+A S ++ + H HLV
Sbjct: 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHLVLN 77
Query: 396 MG--CCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSF 453
G C + +V E++ G+L T + KNC + L ++ +A ++ + F
Sbjct: 78 YGVCVCGDENILVQEFVKFGSLD----TYLKKNKNC-----INILWKLEVAKQLAAAMHF 128
Query: 454 LHSTEPRPIVHGSLTPSSILLDRN--------LVAKISGLGLNIC--------------- 490
L E ++HG++ +ILL R K+S G++I
Sbjct: 129 L---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 491 -------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL 543
LN+ +D +FGT L + +G + + ALD +Q + + P
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGD-----KPLSALDSQRKLQFYEDRHQL-PA 239
Query: 544 DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 579
A ELA + C+ + D R ++++L+ +
Sbjct: 240 PKAAELANLINNCMDYEPDHRPSFR--AIIRDLNSL 273
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 82/219 (37%), Gaps = 57/219 (26%)
Query: 338 FSERFRLK---CAGDWTNVYRGR--LNHASVAIKTLNNGLSEED-----FQAKVSFLTAV 387
S+R+ L G + V+ R +H VA+K L L+ + F+ + A+
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 388 RHPHLVAVMGC------CSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
HP +VAV L IV EY+ LRD + T + RA I
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRA------I 119
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----------- 490
+ + C L+F H I+H + P++IL+ K+ G+
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 491 -----------------DQLNVRSDIRAFGTLLLHLLTG 512
D ++ RSD+ + G +L +LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 347 AGDWTNVYRGR--LNHASVAIKTLN-NGLSEEDFQAKV----SFLTAVRHPHLVAVMGCC 399
G + V G+ L VA+K LN + D K+ L RHPH++ +
Sbjct: 26 VGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI 85
Query: 400 SELKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHST 457
S I V EY+ G L D + + R + SR + ++ G+ + H
Sbjct: 86 STPSDIFMVMEYVSGGELFDYICKNGRLDEKESR----------RLFQQILSGVDYCHRH 135
Query: 458 EPRPIVHGSLTPSSILLDRNLVAKISGLGLN--ICDQLNVRSDIRAFGTLLLHLLTGRNW 515
+VH L P ++LLD ++ AKI+ GL+ + D +R + +++GR +
Sbjct: 136 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
Query: 516 AG 517
AG
Sbjct: 193 AG 194
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 27/157 (17%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDF--QAKVSFLTAVRHPHLVAVMGCCSELKC- 404
G + VY+G L+ VA+K + + ++F + + + + H ++ + +
Sbjct: 24 GRYGAVYKGSLDERPVAVKVFSFA-NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD 82
Query: 405 ------IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTE 458
+V EY PNG+L L + W+ +AH V GL++LH+
Sbjct: 83 GRMEYLLVMEYYPNGSLXKYLSLHTSD-----------WVSSCRLAHSVTRGLAYLHTEL 131
Query: 459 PR------PIVHGSLTPSSILLDRNLVAKISGLGLNI 489
PR I H L ++L+ + IS GL++
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 361 ASVAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCC-----SELKCIVFEYMPNG 413
A VA+K L + ++ DFQ ++ L A+ +V G L+ +V EY+P+G
Sbjct: 40 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR-LVMEYLPSG 98
Query: 414 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 473
LRD L QR+ +R L + + ++C G+ +L S R VH L +IL
Sbjct: 99 CLRDFL---QRHRARLDASRLLLY------SSQICKGMEYLGS---RRCVHRDLAARNIL 146
Query: 474 LDRNLVAKISGLGL 487
++ KI+ GL
Sbjct: 147 VESEAHVKIADFGL 160
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 361 ASVAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCC-----SELKCIVFEYMPNG 413
A VA+K L + ++ DFQ ++ L A+ +V G L+ +V EY+P+G
Sbjct: 53 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR-LVMEYLPSG 111
Query: 414 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 473
LRD L QR+ +R L + + ++C G+ +L S R VH L +IL
Sbjct: 112 CLRDFL---QRHRARLDASRLLLY------SSQICKGMEYLGS---RRCVHRDLAARNIL 159
Query: 474 LDRNLVAKISGLGL 487
++ KI+ GL
Sbjct: 160 VESEAHVKIADFGL 173
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 57/219 (26%)
Query: 338 FSERFRLK---CAGDWTNVYRGR--LNHASVAIKTLNNGLSEED-----FQAKVSFLTAV 387
S+R+ L G + V+ R +H VA+K L L+ + F+ + A+
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 388 RHPHLVAVMGC------CSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
HP +VAV L IV EY+ LRD + T + RA I
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRA------I 119
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----------- 490
+ + C L+F H I+H + P++I++ K+ G+
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 491 -----------------DQLNVRSDIRAFGTLLLHLLTG 512
D ++ RSD+ + G +L +LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 361 ASVAIKTLNNGLSEE--DFQAKVSFLTAVRHPHLVAVMGCC-----SELKCIVFEYMPNG 413
A VA+K L + ++ DFQ ++ L A+ +V G L+ +V EY+P+G
Sbjct: 41 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR-LVMEYLPSG 99
Query: 414 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 473
LRD L QR+ +R L + + ++C G+ +L S R VH L +IL
Sbjct: 100 CLRDFL---QRHRARLDASRLLLY------SSQICKGMEYLGS---RRCVHRDLAARNIL 147
Query: 474 LDRNLVAKISGLGL 487
++ KI+ GL
Sbjct: 148 VESEAHVKIADFGL 161
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 57/219 (26%)
Query: 338 FSERFRLK---CAGDWTNVYRGR--LNHASVAIKTLNNGLSEED-----FQAKVSFLTAV 387
S+R+ L G + V+ R +H VA+K L L+ + F+ + A+
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 388 RHPHLVAVMGC------CSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRI 441
HP +VAV L IV EY+ LRD + T + RA I
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRA------I 119
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----------- 490
+ + C L+F H I+H + P++I++ K+ G+
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 491 -----------------DQLNVRSDIRAFGTLLLHLLTG 512
D ++ RSD+ + G +L +LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 324 REYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHAS--VAIKTLNNG--LSEEDFQA 379
+E + I+L EDF E ++ G + V+ + AIK L L ++D +
Sbjct: 6 KERPSLQIKLKIEDF-ELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 64
Query: 380 ----KVSFLTAVRHPHLVAVMGCCSELK---CIVFEYMPNGNLRDKLFTSQRNYK-NCSR 431
K A HP L M C + K V EY+ G+L ++ Q +K + SR
Sbjct: 65 TMVEKRVLSLAWEHPFLTH-MFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSR 120
Query: 432 ARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
A A E+ LGL FLHS + IV+ L +ILLD++ KI+ G+
Sbjct: 121 A--------TFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 165
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 71/192 (36%), Gaps = 52/192 (27%)
Query: 360 HASVAIKTLNNGLSEED-----FQAKVSFLTAVRHPHLVAVMGC------CSELKCIVFE 408
H VA+K L L+ + F+ + A+ HP +VAV L IV E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVME 96
Query: 409 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLT 468
Y+ LRD + T + RA I + + C L+F H I+H +
Sbjct: 97 YVDGVTLRDIVHTE----GPMTPKRA------IEVIADACQALNFSHQNG---IIHRDVK 143
Query: 469 PSSILLDRNLVAKISGLGLNIC----------------------------DQLNVRSDIR 500
P++I++ K+ G+ D ++ RSD+
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 501 AFGTLLLHLLTG 512
+ G +L +LTG
Sbjct: 204 SLGCVLYEVLTG 215
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 389 HPHLVAVMGC--CSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHE 446
HPH++ ++ S +VF+ M G L D L + AL + I
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----------TEKVALSEKETRSIMRS 208
Query: 447 VCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ +SFLH+ IVH L P +ILLD N+ ++S G +
Sbjct: 209 LLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 17/139 (12%)
Query: 353 VYRGRLNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCC----SELKC 404
+++GR + +K L + DF + L HP+++ V+G C +
Sbjct: 26 LWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85
Query: 405 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVH 464
++ + P G+L + L + S+A + A + G +FLH+ EP I
Sbjct: 86 LITHWXPYGSLYNVLHEGTNFVVDQSQA--------VKFALDXARGXAFLHTLEPL-IPR 136
Query: 465 GSLTPSSILLDRNLVAKIS 483
+L S+ +D + A+IS
Sbjct: 137 HALNSRSVXIDEDXTARIS 155
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 49 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 106
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 107 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 155
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGT 179
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 71/192 (36%), Gaps = 52/192 (27%)
Query: 360 HASVAIKTLNNGLSEED-----FQAKVSFLTAVRHPHLVAVMGC------CSELKCIVFE 408
H VA+K L L+ + F+ + A+ HP +VAV L IV E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 409 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLT 468
Y+ LRD + T + RA I + + C L+F H I+H +
Sbjct: 97 YVDGVTLRDIVHTE----GPMTPKRA------IEVIADACQALNFSHQNG---IIHRDVK 143
Query: 469 PSSILLDRNLVAKISGLGLNIC----------------------------DQLNVRSDIR 500
P++I++ K+ G+ D ++ RSD+
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 501 AFGTLLLHLLTG 512
+ G +L +LTG
Sbjct: 204 SLGCVLYEVLTG 215
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Query: 359 NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNL- 415
N+ ++IK+ +DF+ ++ +T +++ + + G + I++EYM N ++
Sbjct: 77 NNDKISIKS-----KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSIL 131
Query: 416 --RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 473
+ F +NY + ++ I V S++H+ + I H + PS+IL
Sbjct: 132 KFDEYFFVLDKNYTCFIPIQVIKC-----IIKSVLNSFSYIHNE--KNICHRDVKPSNIL 184
Query: 474 LDRNLVAKISGLG 486
+D+N K+S G
Sbjct: 185 MDKNGRVKLSDFG 197
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 49 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 106
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 107 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 155
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGT 179
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 71/192 (36%), Gaps = 52/192 (27%)
Query: 360 HASVAIKTLNNGLSEED-----FQAKVSFLTAVRHPHLVAVMGC------CSELKCIVFE 408
H VA+K L L+ + F+ + A+ HP +VAV L IV E
Sbjct: 54 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 113
Query: 409 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLT 468
Y+ LRD + T + RA I + + C L+F H I+H +
Sbjct: 114 YVDGVTLRDIVHTE----GPMTPKRA------IEVIADACQALNFSHQNG---IIHRDVK 160
Query: 469 PSSILLDRNLVAKISGLGLNIC----------------------------DQLNVRSDIR 500
P++I++ K+ G+ D ++ RSD+
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 220
Query: 501 AFGTLLLHLLTG 512
+ G +L +LTG
Sbjct: 221 SLGCVLYEVLTG 232
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVF--EYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 366 KTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQ 423
K+ G+S ED + +VS L ++HP+++ + ++ E + G L D F ++
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAE 107
Query: 424 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AK 481
+ ++ + A +L +I G+ +LHS + I H L P +I LLDRN+ +
Sbjct: 108 K--ESLTEEEATEFLKQI------LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPR 156
Query: 482 ISGLGLNICDQLNVRSDIR-AFGT 504
I + + +++ ++ + FGT
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGT 180
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 324 REYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHAS--VAIKTLNNG--LSEEDFQA 379
+E + I+L EDF ++ G + V+ + AIK L L ++D +
Sbjct: 5 KERPSLQIKLKIEDFILH-KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 63
Query: 380 ----KVSFLTAVRHPHLVAVMGCCSELK---CIVFEYMPNGNLRDKLFTSQRNYK-NCSR 431
K A HP L M C + K V EY+ G+L ++ Q +K + SR
Sbjct: 64 TMVEKRVLSLAWEHPFLTH-MFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSR 119
Query: 432 ARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
A A E+ LGL FLHS + IV+ L +ILLD++ KI+ G+
Sbjct: 120 A--------TFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 164
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 315 RSSELSCAFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSE 374
++S+ S +E+ DI + E L G + VY GR H VAI+ ++
Sbjct: 17 KASQTSIFLQEW---DIPFEQLEIGE---LIGKGRFGQVYHGRW-HGEVAIRLIDIERDN 69
Query: 375 ED----FQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYKNC 429
ED F+ +V RH ++V MG C S + + G L++ R+ K
Sbjct: 70 EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR---TLYSVVRDAKIV 126
Query: 430 SRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R IA E+ G+ +LH+ + I+H L ++ D V I+ GL
Sbjct: 127 LDVNKTR-----QIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAV----RHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 416
VA+K L + ++ +A +S L + +H ++V ++G C+ ++ EY G+L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 417 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR 476
+ L + R L D +H + +V G++FL S + +H + ++LL
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTN 195
Query: 477 NLVAKISGLGL 487
VAKI GL
Sbjct: 196 GHVAKIGDFGL 206
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 357 RLNHASVAIKTLN-NGLSEEDFQAKVSF----LTAVRHPHLVAVMGCCSELK--CIVFEY 409
+L VA+K LN + D K+ L RHPH++ + S +V EY
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 410 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTP 469
+ G L D + R A R +I A + C +VH L P
Sbjct: 93 VSGGELFDYICKHGR----VEEMEARRLFQQILSAVDYC---------HRHMVVHRDLKP 139
Query: 470 SSILLDRNLVAKISGLGLN--ICDQLNVRSDIRAFGTLLLHLLTGRNWAG 517
++LLD ++ AKI+ GL+ + D +R+ + +++GR +AG
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 189
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 31 GIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 90
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R Y +L I A+++ L++L S + VH
Sbjct: 91 MELCTLGELRS--FLQVRKY-------SLDLASLILYAYQLSTALAYLES---KRFVHRD 138
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ N K+ GL+
Sbjct: 139 IAARNVLVSSNDCVKLGDFGLS 160
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 311 GMVIRSSELSCAFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNN 370
G+V R S RE + L F E + G +TN ++N VA+KT
Sbjct: 10 GLVPRGSPQYGIAREDVVLNRILGEGFFGEVYE----GVYTNHKGEKIN---VAVKTCKK 62
Query: 371 GLS---EEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNY 426
+ +E F ++ + + HPH+V ++G E I+ E P G L L +RN
Sbjct: 63 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL---ERN- 118
Query: 427 KNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 486
KN +L+ L + + ++C +++L S VH + +IL+ K+ G
Sbjct: 119 KN-----SLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFG 170
Query: 487 LN 488
L+
Sbjct: 171 LS 172
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 343 RLKCAGDWTNVYRG-RLNH----ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVA 394
R+ G + VY G NH +VA+KT + +E F ++ + + HPH+V
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 395 VMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSF 453
++G E I+ E P G L L +RN KN +L+ L + + ++C +++
Sbjct: 74 LIGIIEEEPTWIIMELYPYGELGHYL---ERN-KN-----SLKVLTLVLYSLQICKAMAY 124
Query: 454 LHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
L S VH + +IL+ K+ GL+
Sbjct: 125 LESIN---CVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 32 GIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 91
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R Y +L I A+++ L++L S + VH
Sbjct: 92 MELCTLGELRS--FLQVRKY-------SLDLASLILYAYQLSTALAYLES---KRFVHRD 139
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ N K+ GL+
Sbjct: 140 IAARNVLVSSNDCVKLGDFGLS 161
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 343 RLKCAGDWTNVYRG-RLNH----ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVA 394
R+ G + VY G NH +VA+KT + +E F ++ + + HPH+V
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 395 VMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSF 453
++G E I+ E P G L L +RN KN +L+ L + + ++C +++
Sbjct: 78 LIGIIEEEPTWIIMELYPYGELGHYL---ERN-KN-----SLKVLTLVLYSLQICKAMAY 128
Query: 454 LHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
L S VH + +IL+ K+ GL+
Sbjct: 129 LESIN---CVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 26 GIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 85
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R Y +L I A+++ L++L S + VH
Sbjct: 86 MELCTLGELRS--FLQVRKY-------SLDLASLILYAYQLSTALAYLES---KRFVHRD 133
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ N K+ GL+
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLS 155
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 389 HPHLVAVMGCCSELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAH 445
H + + E K C+V M G++R ++ + RA I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA------IFYTA 296
Query: 446 EVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI---CDQLNVRSDIRAF 502
++ GL LH R I++ L P ++LLD + +IS LGL + Q +
Sbjct: 297 QIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 503 GTLLLHLLTGRNW 515
G + LL G +
Sbjct: 354 GFMAPELLLGEEY 366
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 389 HPHLVAVMGCCSELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAH 445
H + + E K C+V M G++R ++ + RA I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA------IFYTA 296
Query: 446 EVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI---CDQLNVRSDIRAF 502
++ GL LH R I++ L P ++LLD + +IS LGL + Q +
Sbjct: 297 QIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 503 GTLLLHLLTGRNW 515
G + LL G +
Sbjct: 354 GFMAPELLLGEEY 366
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 389 HPHLVAVMGCCSELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAH 445
H + + E K C+V M G++R ++ + RA I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA------IFYTA 296
Query: 446 EVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI---CDQLNVRSDIRAF 502
++ GL LH R I++ L P ++LLD + +IS LGL + Q +
Sbjct: 297 QIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 503 GTLLLHLLTGRNW 515
G + LL G +
Sbjct: 354 GFMAPELLLGEEY 366
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAV----RHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 416
VA+K L + ++ +A +S L + +H ++V ++G C+ ++ EY G+L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 417 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR 476
+ L + R L D +H + +V G++FL S + +H + ++LL
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTN 187
Query: 477 NLVAKISGLGL 487
VAKI GL
Sbjct: 188 GHVAKIGDFGL 198
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 34 GIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 93
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R Y +L I A+++ L++L S + VH
Sbjct: 94 MELCTLGELRS--FLQVRKY-------SLDLASLILYAYQLSTALAYLES---KRFVHRD 141
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ N K+ GL+
Sbjct: 142 IAARNVLVSSNDCVKLGDFGLS 163
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 29 GIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 88
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R Y +L I A+++ L++L S VH
Sbjct: 89 MELCTLGELRS--FLQVRKY-------SLDLASLILYAYQLSTALAYLESKR---FVHRD 136
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ N K+ GL+
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLS 158
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 52/209 (24%)
Query: 343 RLKCAGDWTNVYRGRL-----NHASVAIKTLNNGLSEEDFQAKVS---FLTAVRHPHLVA 394
R+ G + VY G N AIK+L+ + +A + + + HP+++A
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 395 VMGCCSE---LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGL 451
++G L ++ YM +G+L + + QRN D I +V G+
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVK---------DLISFGLQVARGM 137
Query: 452 SFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQ----------------- 492
+L + VH L + +LD + K++ GL +I D+
Sbjct: 138 EYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 493 ----------LNVRSDIRAFGTLLLHLLT 511
+SD+ +FG LL LLT
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 42 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 101
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ FL S
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKFLAS 152
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 153 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 265
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 266 PLYEVMLKC 274
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 39 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 98
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ FL S
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKFLAS 149
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 150 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 262
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 263 PLYEVMLKC 271
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 22/170 (12%)
Query: 357 RLNHASVAIKTLN-NGLSEEDFQAKVSF----LTAVRHPHLVAVMGCCSELK--CIVFEY 409
+L VA+K LN + D K+ L RHPH++ + S +V EY
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 410 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTP 469
+ G L D + R A R +I A + C +VH L P
Sbjct: 93 VSGGELFDYICKHGR----VEEMEARRLFQQILSAVDYC---------HRHMVVHRDLKP 139
Query: 470 SSILLDRNLVAKISGLGLN--ICDQLNVRSDIRAFGTLLLHLLTGRNWAG 517
++LLD ++ AKI+ GL+ + D +R + +++GR +AG
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAG 189
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 389 HPHLVAVMGCCSELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAH 445
H + + E K C+V M G++R ++ + RA I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA------IFYTA 296
Query: 446 EVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI---CDQLNVRSDIRAF 502
++ GL LH R I++ L P ++LLD + +IS LGL + Q +
Sbjct: 297 QIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 503 GTLLLHLLTGRNW 515
G + LL G +
Sbjct: 354 GFMAPELLLGEEY 366
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 96/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 100 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 159
Query: 400 --SE-LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
SE +V YM +G+LR+ + RN + + D I +V G+ FL S
Sbjct: 160 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKFLAS 210
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 211 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 323
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 324 PLYEVMLKC 332
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 29 GIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 88
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R Y +L I A+++ L++L S VH
Sbjct: 89 MELCTLGELRS--FLQVRKY-------SLDLASLILYAYQLSTALAYLESKR---FVHRD 136
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ N K+ GL+
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLS 158
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 42 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 101
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ FL S
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKFLAS 152
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 153 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 265
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 266 PLYEVMLKC 274
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 96/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 400 --SE-LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
SE +V YM +G+LR+ + RN + + D I +V G+ FL S
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKFLAS 151
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 152 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 264
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 265 PLYEVMLKC 273
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 96/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 400 --SE-LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
SE +V YM +G+LR+ + RN + + D I +V G+ FL S
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKFLAS 151
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 152 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 264
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 265 PLYEVMLKC 273
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 57 GIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 116
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R Y +L I A+++ L++L S + VH
Sbjct: 117 MELCTLGELRS--FLQVRKY-------SLDLASLILYAYQLSTALAYLES---KRFVHRD 164
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ N K+ GL+
Sbjct: 165 IAARNVLVSSNDCVKLGDFGLS 186
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 371 GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKN 428
G+S E+ + +V+ L +RHP+++ + ++ E + G L D F +++ ++
Sbjct: 56 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD--FLAEK--ES 111
Query: 429 CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AKISGLG 486
+ A ++L +I G+ +LHS + I H L P +I LLD+N+ +I +
Sbjct: 112 LTEDEATQFLKQI------LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 162
Query: 487 LNICDQLNVRSDIR-AFGT 504
I ++ ++ + FGT
Sbjct: 163 FGIAHKIEAGNEFKNIFGT 181
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 96/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 46 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 105
Query: 400 --SE-LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
SE +V YM +G+LR+ + RN + + D I +V G+ FL S
Sbjct: 106 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKFLAS 156
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 157 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 269
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 270 PLYEVMLKC 278
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 371 GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKN 428
G+S E+ + +V+ L +RHP+++ + ++ E + G L D F +++ ++
Sbjct: 49 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD--FLAEK--ES 104
Query: 429 CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AKISGLG 486
+ A ++L +I G+ +LHS + I H L P +I LLD+N+ +I +
Sbjct: 105 LTEDEATQFLKQI------LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 155
Query: 487 LNICDQLNVRSDIR-AFGT 504
I ++ ++ + FGT
Sbjct: 156 FGIAHKIEAGNEFKNIFGT 174
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 353 VYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IVF 407
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 410 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM 469
Query: 408 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSL 467
E G LR F R + +L I A+++ L++L S + VH +
Sbjct: 470 ELCTLGELRS--FLQVRKF-------SLDLASLILYAYQLSTALAYLES---KRFVHRDI 517
Query: 468 TPSSILLDRNLVAKISGLGLN 488
++L+ N K+ GL+
Sbjct: 518 AARNVLVSSNDCVKLGDFGLS 538
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 67 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 121
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 122 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 488 N 488
+
Sbjct: 174 S 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 67 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 121
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 122 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 488 N 488
+
Sbjct: 174 S 174
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 371 GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKN 428
G+S E+ + +V+ L +RHP+++ + ++ E + G L D F +++ ++
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD--FLAEK--ES 125
Query: 429 CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI-LLDRNLV-AKISGLG 486
+ A ++L +I G+ +LHS + I H L P +I LLD+N+ +I +
Sbjct: 126 LTEDEATQFLKQI------LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 176
Query: 487 LNICDQLNVRSDIR-AFGT 504
I ++ ++ + FGT
Sbjct: 177 FGIAHKIEAGNEFKNIFGT 195
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 404 CIVFEYMPNGNLRDKLF-TSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
C+V M G+L+ ++ Q + ARA + A E+C GL LH I
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGF---PEARA------VFYAAEICCGLEDLHRER---I 307
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLNI 489
V+ L P +ILLD + +IS LGL +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAV 334
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 404 CIVFEYMPNGNLRDKLF-TSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPI 462
C+V M G+L+ ++ Q + ARA + A E+C GL LH I
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGF---PEARA------VFYAAEICCGLEDLHRER---I 307
Query: 463 VHGSLTPSSILLDRNLVAKISGLGLNI 489
V+ L P +ILLD + +IS LGL +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAV 334
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLF 420
VA T + GLS ED + + S ++HPH+V ++ S + +VFE+M +L ++
Sbjct: 61 VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV 120
Query: 421 TSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL---DRN 477
S A A ++ +I A C H I+H + P +LL + +
Sbjct: 121 KRADAGFVYSEAVASHYMRQILEALRYC------HDNN---IIHRDVKPHCVLLASKENS 171
Query: 478 LVAKISGLGLNI 489
K+ G G+ I
Sbjct: 172 APVKLGGFGVAI 183
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLF 420
VA T + GLS ED + + S ++HPH+V ++ S + +VFE+M +L ++
Sbjct: 59 VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV 118
Query: 421 TSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL---DRN 477
S A A ++ +I A L + H I+H + P +LL + +
Sbjct: 119 KRADAGFVYSEAVASHYMRQILEA------LRYCHDNN---IIHRDVKPHCVLLASKENS 169
Query: 478 LVAKISGLGLNI 489
K+ G G+ I
Sbjct: 170 APVKLGGFGVAI 181
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 39 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 98
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 149
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 150 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 262
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 263 PLYEVMLKC 271
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 151
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 152 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 264
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 265 PLYEVMLKC 273
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 57 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 111
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 112 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 163
Query: 488 N 488
+
Sbjct: 164 S 164
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 40 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 99
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 150
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 151 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 263
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 264 PLYEVMLKC 272
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 151
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 152 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 264
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 265 PLYEVMLKC 273
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 65 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 119
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 120 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 171
Query: 488 N 488
+
Sbjct: 172 S 172
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 40 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 99
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 150
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 151 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 263
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 264 PLYEVMLKC 272
>pdb|2C2L|A Chain A, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase
pdb|2C2L|B Chain B, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase
pdb|2C2L|C Chain C, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase
pdb|2C2L|D Chain D, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase
Length = 281
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 602 KEDSNDVPSVFICPIFQEVMKTPHVAADGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYL 661
K D+P I E+M+ P + G +Y+ + +EE L +P+T L + L
Sbjct: 199 KRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQL 258
Query: 662 TPNHTLRSLI 671
PN ++ +I
Sbjct: 259 IPNLAMKEVI 268
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 51 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 105
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 106 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 488 N 488
+
Sbjct: 158 S 158
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 36 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 95
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 96 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 146
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 147 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 259
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 260 PLYEVMLKC 268
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 45 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 99
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 100 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 151
Query: 488 N 488
+
Sbjct: 152 S 152
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 51 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 105
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 106 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 488 N 488
+
Sbjct: 158 S 158
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 47 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 101
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 102 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 488 N 488
+
Sbjct: 154 S 154
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 38 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 97
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 98 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 148
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 149 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 261
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 262 PLYEVMLKC 270
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 33 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 92
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 93 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 143
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 144 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 256
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 257 PLYEVMLKC 265
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 59 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 118
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 119 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 169
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 170 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 282
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 283 PLYEVMLKC 291
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 29 GIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 88
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R + +L I A+++ L++L S VH
Sbjct: 89 MELCTLGELRS--FLQVRKF-------SLDLASLILYAYQLSTALAYLESKR---FVHRD 136
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ N K+ GL+
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLS 158
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 56/249 (22%)
Query: 348 GDWTNVYRGRL-----NHASVAIKTLN--NGLSE-EDFQAKVSFLTAVRHPHLVAVMGCC 399
G + VY G L A+K+LN + E F + + HP++++++G C
Sbjct: 60 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 119
Query: 400 SELK---CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 456
+ +V YM +G+LR+ + RN + + D I +V G+ +L S
Sbjct: 120 LRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVK-----DLIGFGLQVAKGMKYLAS 170
Query: 457 TEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICD----------------------- 491
+ VH L + +LD K++ GL ++ D
Sbjct: 171 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 492 ----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 547
+ +SD+ +FG LL L+T A D T + L G + P +
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL--LQGRRLLQPEYCPD 283
Query: 548 ELAGIALKC 556
L + LKC
Sbjct: 284 PLYEVMLKC 292
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 410 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 464
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 465 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 516
Query: 488 N 488
+
Sbjct: 517 S 517
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 369 NNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-SELKCIVFEYMPNGNLRDKLFTSQRNYK 427
N+ +++ A+ + + + +P++V ++G C +E +V E G L L Q+N
Sbjct: 409 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL---QQN-- 463
Query: 428 NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
R ++ + I + H+V +G+ +L + VH L ++LL AKIS GL
Sbjct: 464 -----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 515
Query: 488 N 488
+
Sbjct: 516 S 516
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 342 FRLKCAGDWTNVYRGRLNHASVAIKT--LNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC 399
+K G + V++ +L + VA+K + + S ++ + +V L ++H +++ +G
Sbjct: 29 LEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAE 87
Query: 400 SELKCI------VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSF 453
+ + + G+L D L +A + W + HIA + GL++
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFL-----------KANVVSWNELCHIAETMARGLAY 136
Query: 454 LHSTEP------RP-IVHGSLTPSSILLDRNLVAKISGLGLNI 489
LH P +P I H + ++LL NL A I+ GL +
Sbjct: 137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 352 NVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCI--VFEY 409
+V GR + KT N S + +V + + HP++V + K + V EY
Sbjct: 36 HVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEY 95
Query: 410 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTP 469
G + D L R + +RA+ + + + H+ + IVH L
Sbjct: 96 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ-------------KYIVHRDLKA 142
Query: 470 SSILLDRNLVAKISGLGLN 488
++LLD ++ KI+ G +
Sbjct: 143 ENLLLDGDMNIKIADFGFS 161
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VAIK ++ N S + +V + + HP++V +
Sbjct: 26 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET 85
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + + EY G + D L R + +R++ + + + H+
Sbjct: 86 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ------------- 132
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDIRAF 502
+ IVH L ++LLD ++ KI+ G + ++ V + AF
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFS--NEFTVGGKLDAF 173
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 334 ATEDFSERFRLKCAGDWTNVYRGRLNHAS--VAIKTL-----NNGLSEEDFQAKVSFLTA 386
A EDF E R G + NVY R + +A+K L E + +V +
Sbjct: 11 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 387 VRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIA 444
+RHP+++ + G + ++ EY P G T R + S+ R I
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLG-------TVYRELQKLSKFDEQRTATYIT-- 120
Query: 445 HEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDI 499
E+ LS+ HS ++H + P ++LL KI+ G ++ + R+D+
Sbjct: 121 -ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 171
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 334 ATEDFSERFRLKCAGDWTNVYRGRLNHAS--VAIKTL-----NNGLSEEDFQAKVSFLTA 386
A EDF E R G + NVY R + +A+K L E + +V +
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 387 VRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIA 444
+RHP+++ + G + ++ EY P G T R + S+ R I
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLG-------TVYRELQKLSKFDEQRTATYIT-- 115
Query: 445 HEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDI 499
E+ LS+ HS ++H + P ++LL KI+ G ++ + R+D+
Sbjct: 116 -ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 334 ATEDFSERFRLKCAGDWTNVYRGRLNHAS--VAIKTL-----NNGLSEEDFQAKVSFLTA 386
A EDF E R G + NVY R + +A+K L E + +V +
Sbjct: 7 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 387 VRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIA 444
+RHP+++ + G + ++ EY P G T R + S+ R I
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLG-------TVYRELQKLSKFDEQRTATYIT-- 116
Query: 445 HEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDI 499
E+ LS+ HS ++H + P ++LL KI+ G ++ + R+D+
Sbjct: 117 -ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VA+K ++ N S + +V + + HP++V +
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + V EY G + D L R + +RA+ + + + H+
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ------------- 131
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ IVH L ++LLD ++ KI+ G +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 334 ATEDFSERFRLKCAGDWTNVYRGRLNHAS--VAIKTL-----NNGLSEEDFQAKVSFLTA 386
A EDF E R G + NVY R + +A+K L E + +V +
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 387 VRHPHLVAVMGCCSELK--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIA 444
+RHP+++ + G + ++ EY P G T R + S+ R I
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLG-------TVYRELQKLSKFDEQRTATYIT-- 115
Query: 445 HEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDI 499
E+ LS+ HS ++H + P ++LL KI+ G ++ + R+D+
Sbjct: 116 -ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 22/148 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLNNGLSE-----EDFQAKVSFLTAVRHPHLVAVMGCC- 399
G + VY R N VAIK ++ + +D +V FL +RHP+ + GC
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85
Query: 400 -SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTE 458
+V EY G+ D L ++ + A + H GL++LHS
Sbjct: 86 REHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---------VTHGALQGLAYLHSHN 135
Query: 459 PRPIVHGSLTPSSILLDRNLVAKISGLG 486
++H + +ILL + K+ G
Sbjct: 136 ---MIHRDVKAGNILLSEPGLVKLGDFG 160
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 22/148 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLNNGLSE-----EDFQAKVSFLTAVRHPHLVAVMGCC- 399
G + VY R N VAIK ++ + +D +V FL +RHP+ + GC
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124
Query: 400 -SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTE 458
+V EY G+ D L ++ + A + H GL++LHS
Sbjct: 125 REHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---------VTHGALQGLAYLHSHN 174
Query: 459 PRPIVHGSLTPSSILLDRNLVAKISGLG 486
++H + +ILL + K+ G
Sbjct: 175 ---MIHRDVKAGNILLSEPGLVKLGDFG 199
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VA+K ++ N S + +V + + HP++V +
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + V EY G + D L R + +RA+ + + + H+
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ------------- 131
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ IVH L ++LLD ++ KI+ G +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 444 AHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICD 491
A E+ LGL +H+ R +V+ L P++ILLD + +IS LGL CD
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL-ACD 341
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 444 AHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICD 491
A E+ LGL +H+ R +V+ L P++ILLD + +IS LGL CD
Sbjct: 297 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL-ACD 340
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLF 420
VA T + GLS ED + + S ++HPH+V ++ S + +VFE+M +L ++
Sbjct: 59 VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV 118
Query: 421 TSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL---DRN 477
S A A ++ +I A C H I+H + P ++LL + +
Sbjct: 119 KRADAGFVYSEAVASHYMRQILEALRYC------HDNN---IIHRDVKPENVLLASKENS 169
Query: 478 LVAKISGLGLNI 489
K+ G+ I
Sbjct: 170 APVKLGDFGVAI 181
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 444 AHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICD 491
A E+ LGL +H+ R +V+ L P++ILLD + +IS LGL CD
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA-CD 341
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 444 AHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICD 491
A E+ LGL +H+ R +V+ L P++ILLD + +IS LGL CD
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA-CD 341
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VA+K ++ N S + +V + + HP++V +
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + V EY G + D L R + +RA+ + + + H+
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ------------- 131
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ IVH L ++LLD ++ KI+ G +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 353 VYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IVF 407
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 410 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM 469
Query: 408 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSL 467
E G LR F R + +L I A+++ L++L S + VH +
Sbjct: 470 ELCTLGELRS--FLQVRKF-------SLDLASLILYAYQLSTALAYLES---KRFVHRDI 517
Query: 468 TPSSILLDRNLVAKISGLGLN 488
++L+ K+ GL+
Sbjct: 518 AARNVLVSATDCVKLGDFGLS 538
>pdb|2C2V|S Chain S, Crystal Structure Of The Chip-Ubc13-Uev1a Complex
pdb|2C2V|T Chain T, Crystal Structure Of The Chip-Ubc13-Uev1a Complex
pdb|2C2V|U Chain U, Crystal Structure Of The Chip-Ubc13-Uev1a Complex
pdb|2C2V|V Chain V, Crystal Structure Of The Chip-Ubc13-Uev1a Complex
Length = 78
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 607 DVPSVFICPIFQEVMKTPHVAADGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHT 666
D+P I E+M+ P + G +Y+ + +EE L +P+T L + L PN
Sbjct: 1 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLA 60
Query: 667 LRSLI 671
++ +I
Sbjct: 61 MKEVI 65
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI G GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VAIK ++ N S + +V + + HP++V +
Sbjct: 23 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET 82
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + + EY G + D L R + +R++ + + + H+
Sbjct: 83 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ------------- 129
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ IVH L ++LLD ++ KI+ G +
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 352 NVYRGRLNHA-SVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSELKC-IV 406
+Y N A +VAIKT N S+ E F + + HPH+V ++G +E I+
Sbjct: 29 GIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 88
Query: 407 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 466
E G LR F R + +L I A+++ L++L S + VH
Sbjct: 89 MELCTLGELRS--FLQVRKF-------SLDLASLILYAYQLSTALAYLES---KRFVHRD 136
Query: 467 LTPSSILLDRNLVAKISGLGLN 488
+ ++L+ K+ GL+
Sbjct: 137 IAARNVLVSATDCVKLGDFGLS 158
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VA++ ++ N S + +V + + HP++V +
Sbjct: 25 GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + V EY G + D L R + +RA+ + + + H+
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ------------- 131
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ IVH L ++LLD ++ KI+ G +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 348 GDWTNVYRGRLNH-----ASVAIKTL---NNGLSE-EDFQAKVSFLTAVRHPHLVAVMGC 398
G++ +V G L VA+KT+ N+ E E+F ++ + + HP+++ ++G
Sbjct: 45 GEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV 104
Query: 399 CSEL-------KCIVFEYMPNGNLRDKLFTS--QRNYKNCSRARALRWLDRIHIAHEVCL 449
C E+ ++ +M G+L L S + K+ L+++ I + E
Sbjct: 105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS 164
Query: 450 GLSFLH 455
+FLH
Sbjct: 165 NRNFLH 170
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 17/137 (12%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAV----RHPHLVAVMGCCSE--LKCIVFEYMPNGNL- 415
VA+K L + ++ +A +S L + +H ++V ++G C+ ++ EY G+L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 416 -----RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPS 470
+ ++ + + + + R D +H + +V G++FL S + +H +
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTR--DLLHFSSQVAQGMAFLAS---KNCIHRDVAAR 193
Query: 471 SILLDRNLVAKISGLGL 487
++LL VAKI GL
Sbjct: 194 NVLLTNGHVAKIGDFGL 210
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 348 GDWTNVYRGRL--NHASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGCCSEL 402
G++ V+ GRL ++ VA+K+ L + F + L HP++V ++G C++
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 403 K--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPR 460
+ IV E + G+ L T LR + + + G+ +L S +
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTE---------GARLRVKTLLQMVGDAAAGMEYLES---K 232
Query: 461 PIVHGSLTPSSILLDRNLVAKISGLGLN 488
+H L + L+ V KIS G++
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 348 GDWTNVYRGRL--NHASVAIKTLNNGLSEE---DFQAKVSFLTAVRHPHLVAVMGCCSEL 402
G++ V+ GRL ++ VA+K+ L + F + L HP++V ++G C++
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 403 K--CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPR 460
+ IV E + G+ L T LR + + + G+ +L S +
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTE---------GARLRVKTLLQMVGDAAAGMEYLES---K 232
Query: 461 PIVHGSLTPSSILLDRNLVAKISGLGLN 488
+H L + L+ V KIS G++
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VA++ ++ N S + +V + + HP++V +
Sbjct: 25 GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + V EY G + D L R + +RA+ + + + H+
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ------------- 131
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ IVH L ++LLD ++ KI+ G +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAV-RHPHLVAVM-------GCC 399
G + V+ G+ VA+K F+ + T + RH +++ + G
Sbjct: 48 GRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 400 SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH---- 455
++L I +Y NG+L D L ++ + K+ + +A+ GL LH
Sbjct: 108 TQLYLIT-DYHENGSLYDYLKSTTLDAKSM-----------LKLAYSSVSGLCHLHTEIF 155
Query: 456 STEPRP-IVHGSLTPSSILLDRNLVAKISGLGLNI 489
ST+ +P I H L +IL+ +N I+ LGL +
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 17/137 (12%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAV----RHPHLVAVMGCCSE--LKCIVFEYMPNGNL- 415
VA+K L + ++ +A +S L + +H ++V ++G C+ ++ EY G+L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 416 -----RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPS 470
+ ++ + + + + R D +H + +V G++FL S + +H +
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTR--DLLHFSSQVAQGMAFLAS---KNCIHRDVAAR 193
Query: 471 SILLDRNLVAKISGLGL 487
++LL VAKI GL
Sbjct: 194 NVLLTNGHVAKIGDFGL 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 48/202 (23%)
Query: 337 DFSERFRLKCAGDWTNVYRG--RLNHASVAIKTL--NNGLSEEDFQAKVSFLTAVRHPHL 392
DF E L +G + V++ R++ + I+ + NN +E + +A L + H ++
Sbjct: 13 DFKE-IELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKA----LAKLDHVNI 67
Query: 393 VAVMGCCSELKCIVFEYMPNGNLRDKLFTSQ---RNYKNCSRARAL-------------- 435
V GC F+Y P + D L +S N KN SR++
Sbjct: 68 VHYNGCWDG-----FDYDPETS-DDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 436 -RWLDR-----------IHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 483
+W+++ + + ++ G+ ++HS + ++H L PS+I L KI
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIG 178
Query: 484 GLGLNICDQLNVRSDIRAFGTL 505
GL + N R+ GTL
Sbjct: 179 DFGL-VTSLKNDGKRTRSKGTL 199
>pdb|2F42|A Chain A, Dimerization And U-Box Domains Of Zebrafish C-Terminal Of
Hsp70 Interacting Protein
Length = 179
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 602 KEDSNDVPSVFICPIFQEVMKTPHVAADGFSYELEAMEEWLG-MGHDTSPMTNLRLKHKY 660
K ++P I E+M+ P + G +Y+ + +EE L +GH P+T L
Sbjct: 97 KRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGH-FDPVTRSPLTQDQ 155
Query: 661 LTPNHTLRSLI 671
L PN ++ +I
Sbjct: 156 LIPNLAMKEVI 166
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAV----RHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 416
VA+K L + ++ +A +S L + +H ++V ++G C+ ++ EY G+L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 417 DKLFTSQRNYKNCSRA-------------RALRWLDRIHIAHEVCLGLSFLHSTEPRPIV 463
+ L S A R L D +H + +V G++FL S + +
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCI 180
Query: 464 HGSLTPSSILLDRNLVAKISGLGL 487
H + ++LL VAKI GL
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGL 204
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 250
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 250
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 250
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 332 RLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPH 391
++ FSE +R C D V + V I L + + D ++ L + HP+
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKK-----VQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 392 LVAVMGCC---SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVC 448
++ +EL IV E G+L + +++K R R + + + ++C
Sbjct: 94 VIKYYASFIEDNELN-IVLELADAGDLSRMI----KHFKKQKRLIPERTVWKYFV--QLC 146
Query: 449 LGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
L +HS R ++H + P+++ + V K+ LGL
Sbjct: 147 SALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGL 182
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 89 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 135
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VA+K ++ N S + +V + HP++V +
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIET 84
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + V EY G + D L R + +RA+ + + + H+
Sbjct: 85 EKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ------------- 131
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ IVH L ++LLD + KI+ G +
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 141 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 197
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 254
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 248
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 248
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDF-QAKVSFLTAVRHPHLVAVM-------GCC 399
G + V+RG+ VA+K ++ F +A++ +RH +++ + G
Sbjct: 15 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 74
Query: 400 SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH---- 455
++L +V +Y +G+L D L + I +A GL+ LH
Sbjct: 75 TQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAHLHMEIV 122
Query: 456 STEPRP-IVHGSLTPSSILLDRNLVAKISGLGLNI 489
T+ +P I H L +IL+ +N I+ LGL +
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 157
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKI--SGLGLNICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI +GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDF-QAKVSFLTAVRHPHLVAVM-------GCC 399
G + V+RG+ VA+K ++ F +A++ +RH +++ + G
Sbjct: 20 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 79
Query: 400 SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH---- 455
++L +V +Y +G+L D L + I +A GL+ LH
Sbjct: 80 TQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAHLHMEIV 127
Query: 456 STEPRP-IVHGSLTPSSILLDRNLVAKISGLGLNI 489
T+ +P I H L +IL+ +N I+ LGL +
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 162
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDF-QAKVSFLTAVRHPHLVAVM-------GCC 399
G + V+RG+ VA+K ++ F +A++ +RH +++ + G
Sbjct: 14 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73
Query: 400 SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH---- 455
++L +V +Y +G+L D L + I +A GL+ LH
Sbjct: 74 TQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAHLHMEIV 121
Query: 456 STEPRP-IVHGSLTPSSILLDRNLVAKISGLGLNI 489
T+ +P I H L +IL+ +N I+ LGL +
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDF-QAKVSFLTAVRHPHLVAVM-------GCC 399
G + V+RG+ VA+K ++ F +A++ +RH +++ + G
Sbjct: 17 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 76
Query: 400 SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH---- 455
++L +V +Y +G+L D L + I +A GL+ LH
Sbjct: 77 TQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAHLHMEIV 124
Query: 456 STEPRP-IVHGSLTPSSILLDRNLVAKISGLGLNI 489
T+ +P I H L +IL+ +N I+ LGL +
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 159
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 140 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 196
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 197 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 253
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 191
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 248
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 129 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 185
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 242
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDF-QAKVSFLTAVRHPHLVAVM-------GCC 399
G + V+RG+ VA+K ++ F +A++ +RH +++ + G
Sbjct: 53 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112
Query: 400 SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH---- 455
++L +V +Y +G+L D L + I +A GL+ LH
Sbjct: 113 TQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAHLHMEIV 160
Query: 456 STEPRP-IVHGSLTPSSILLDRNLVAKISGLGLNI 489
T+ +P I H L +IL+ +N I+ LGL +
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 348 GDWTNVYRGRLNHASVAIKTLNNGLSEEDF-QAKVSFLTAVRHPHLVAVM-------GCC 399
G + V+RG+ VA+K ++ F +A++ +RH +++ + G
Sbjct: 40 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 99
Query: 400 SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH---- 455
++L +V +Y +G+L D L + I +A GL+ LH
Sbjct: 100 TQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAHLHMEIV 147
Query: 456 STEPRP-IVHGSLTPSSILLDRNLVAKISGLGLNI 489
T+ +P I H L +IL+ +N I+ LGL +
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 182
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 193
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 250
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 245
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 141 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 197
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 254
>pdb|3M62|A Chain A, Crystal Structure Of Ufd2 In Complex With The
Ubiquitin-Like (Ubl) Domain Of Rad23
pdb|3M63|A Chain A, Crystal Structure Of Ufd2 In Complex With The
Ubiquitin-Like (Ubl) Domain Of Dsk2
Length = 968
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 578 EVRKKADGLADKRESEVVTDRCANKEDS---NDVPSVFICPIFQEVMKTPHV-AADGFSY 633
E +K A+K E + R A++E+ DVP F+ P+ +MK P + A +
Sbjct: 859 EFIEKLLNFANKAEEQ----RKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNI 914
Query: 634 ELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHTLRSLI 671
+ ++ L + T P + LK + +TPN LR I
Sbjct: 915 DRSTIKAHL-LSDSTDPFNRMPLKLEDVTPNEELRQKI 951
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 245
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 249
>pdb|2QIZ|A Chain A, Structure Of The Yeast U-Box-Containing Ubiquitin Ligase
Ufd2p
Length = 982
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 578 EVRKKADGLADKRESEVVTDRCANKEDS---NDVPSVFICPIFQEVMKTPHV-AADGFSY 633
E +K A+K E + R A++E+ DVP F+ P+ +MK P + A +
Sbjct: 873 EFIEKLLNFANKAEEQ----RKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNI 928
Query: 634 ELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHTLRSLI 671
+ ++ L + T P + LK + +TPN LR I
Sbjct: 929 DRSTIKAHL-LSDSTDPFNRMPLKLEDVTPNEELRQKI 965
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 249
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 245
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 21/149 (14%)
Query: 348 GDWTNVYRGR--LNHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 401
G++ V R L VA+K ++ N S + +V + + HP++V +
Sbjct: 18 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 77
Query: 402 LKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP 459
K + V EY G + D L + +RA+ + + + H+
Sbjct: 78 EKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ------------- 124
Query: 460 RPIVHGSLTPSSILLDRNLVAKISGLGLN 488
+ IVH L ++LLD ++ KI+ G +
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 153 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR 209
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 266
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 149 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 205
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 262
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 149 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 205
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 262
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 182
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 150 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 206
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 263
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 348 GDWTNVYRGRLNHAS-VAIKTLNNGLSEEDFQA----KVSFLTAVRHPHLVAVMGCCSEL 402
G + VY+ + + VA+K + +E + ++S L + HP++V+++
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE 91
Query: 403 KCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPR 460
+C+ VFE+M +L+ L ++ ++ L L R G++ H
Sbjct: 92 RCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLR---------GVAHCHQHR-- 139
Query: 461 PIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDIRAFGTL 505
I+H L P ++L++ + K++ GL + VRS TL
Sbjct: 140 -ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL 183
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 249
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 150 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR 206
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 263
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 363 VAIKTLNNGLSEEDFQAKVSFLTAV----RHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 416
VA+K L + ++ +A +S L + +H ++V ++G C+ ++ EY G+L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 417 DKL-----------FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHG 465
+ L + N + +R D +H + +V G++FL S + +H
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSR-----DLLHFSSQVAQGMAFLAS---KNCIHR 190
Query: 466 SLTPSSILLDRNLVAKISGLGL 487
+ ++LL VAKI GL
Sbjct: 191 DVAARNVLLTNGHVAKIGDFGL 212
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 142 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 255
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 127 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 183
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 240
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 142 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 255
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 239
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 142 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 255
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 150 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 206
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 263
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 127 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 183
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 240
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 22/116 (18%)
Query: 380 KVSFLTAVR-------HPHLVAVMGCCSELKCIVF--EYMPNGNLRDKLFTSQRNYKNCS 430
KV ++T R HP V + C + + + F Y NG L + + C+
Sbjct: 80 KVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT 139
Query: 431 RARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 486
R E+ L +LH + I+H L P +ILL+ ++ +I+ G
Sbjct: 140 R----------FYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFG 182
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 348 GDWTNVYRGRLNHAS-VAIKTLNNGLSEEDFQA----KVSFLTAVRHPHLVAVMGCCSEL 402
G + VY+ + + VA+K + +E + ++S L + HP++V+++
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE 91
Query: 403 KCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPR 460
+C+ VFE+M +L+ L ++ ++ L L R G++ H
Sbjct: 92 RCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLR---------GVAHCHQHR-- 139
Query: 461 PIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDIRAFGTL 505
I+H L P ++L++ + K++ GL + VRS TL
Sbjct: 140 -ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL 183
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 191
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 248
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 188
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 245
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 128 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 184
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 153 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 209
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 266
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKI--SGLGLNICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKI--SGLGLNICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR 186
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 243
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 192
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 249
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 359 NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVFEYMPNGNLRDK 418
N+A I+ N L+ E +V L + HP +V E E + + +
Sbjct: 32 NYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT--EKLQPSSPKVY 89
Query: 419 LFTSQRNYKNCSRARALRWLDR------------IHIAHEVCLGLSFLHSTEPRPIVHGS 466
L+ + C + W++ +HI ++ + FLHS + ++H
Sbjct: 90 LYIQM---QLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRD 143
Query: 467 LTPSSILLDRNLVAKISGLGL 487
L PS+I + V K+ GL
Sbjct: 144 LKPSNIFFTMDDVVKVGDFGL 164
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 539
N DI + G ++ LLTGR L +DQ L+ L G G
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---LFPGTDHIDQLKLILRLVGTPG 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 355 RGRLNHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVFEYM 410
R RL VAIK + N + + ++ L +H +++A+ K I+ +
Sbjct: 75 RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI-------KDILRPTV 127
Query: 411 PNGNLR------DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVH 464
P G + D + + + S+ L + + +++ GL ++HS + ++H
Sbjct: 128 PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR--YFLYQLLRGLKYMHSAQ---VIH 182
Query: 465 GSLTPSSILLDRNLVAKISGLGL 487
L PS++L++ N KI G+
Sbjct: 183 RDLKPSNLLVNENCELKIGDFGM 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 27 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 86
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 87 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 133
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 134 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 89 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 135
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 355 RGRLNHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVFEYM 410
R RL VAIK + N + + ++ L +H +++A+ K I+ +
Sbjct: 74 RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI-------KDILRPTV 126
Query: 411 PNGNLR------DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVH 464
P G + D + + + S+ L + + +++ GL ++HS + ++H
Sbjct: 127 PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR--YFLYQLLRGLKYMHSAQ---VIH 181
Query: 465 GSLTPSSILLDRNLVAKISGLGL 487
L PS++L++ N KI G+
Sbjct: 182 RDLKPSNLLVNENCELKIGDFGM 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 89 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 135
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 420 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP-------RP-IVHGSLTPSS 471
F + + + + + W + H+A + GLS+LH P +P I H +
Sbjct: 94 FHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKN 153
Query: 472 ILLDRNLVAKISGLGLNI 489
+LL +L A ++ GL +
Sbjct: 154 VLLKSDLTAVLADFGLAV 171
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 89 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 135
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 89 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 135
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 89 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 135
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 89 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 135
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 89 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 135
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 357 RLNHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 411
R+ +VA+K ++ + E+ + ++ + H ++V G E ++ + EY
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 412 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 471
G L D++ A R+ H++ G+ +LH I H + P +
Sbjct: 88 GGELFDRIEPDI----GMPEPDAQRFF------HQLMAGVVYLHGIG---ITHRDIKPEN 134
Query: 472 ILLDRNLVAKISGLGLNICDQLNVRSDI--RAFGTL 505
+LLD KIS GL + N R + + GTL
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 441 IHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+HI ++ + FLHS + ++H L PS+I + V K+ GL
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|2OXQ|C Chain C, Structure Of The Ubch5 :chip U-Box Complex
pdb|2OXQ|D Chain D, Structure Of The Ubch5 :chip U-Box Complex
Length = 80
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 607 DVPSVFICPIFQEVMKTPHVAADGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHT 666
++P I E+M P + G +Y+ + +EE L P+T L L PN
Sbjct: 9 EIPDYLCGKISFELMAEPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLA 68
Query: 667 LRSLI 671
++ +I
Sbjct: 69 MKEVI 73
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 18/130 (13%)
Query: 363 VAIKTLNNGLSEEDF---QAKVSFLTAVRHPHLVAVMGCCSELKCI--VFEYMPNGNLRD 417
VAIK ++ D + ++ L +RH H+ + I V EY P G L D
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 418 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN 477
+ + R + +R + ++ ++++HS + H L P ++L D
Sbjct: 98 YIISQDRLSEEETRV----------VFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEY 144
Query: 478 LVAKISGLGL 487
K+ GL
Sbjct: 145 HKLKLIDFGL 154
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 30/162 (18%)
Query: 340 ERFRLKCAGDWTNVYRGRLNHAS--VAIKTLNNGLSEEDFQA-------KVSFLTAVRHP 390
E+ G + VY+ R + + VAIK + G E ++ L + HP
Sbjct: 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 72
Query: 391 HLVAVMGCCSELKCI--VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVC 448
+++ ++ I VF++M + + + + +L L HI +
Sbjct: 73 NIIGLLDAFGHKSNISLVFDFM------------ETDLEVIIKDNSLV-LTPSHIKAYML 119
Query: 449 L---GLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ GL +LH I+H L P+++LLD N V K++ GL
Sbjct: 120 MTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGL 158
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 42/166 (25%)
Query: 378 QAKVSFLTAVRHP---HLVAVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARA 434
+ ++S L RH HL EL ++FE++ ++ +++ TS A
Sbjct: 49 KKEISILNIARHRNILHLHESFESMEEL-VMIFEFISGLDIFERINTS---------AFE 98
Query: 435 LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD--RNLVAKISGLG------ 486
L + + H+VC L FLHS I H + P +I+ R+ KI G
Sbjct: 99 LNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155
Query: 487 ------------------LNICDQLNVRSDIRAFGTLLLHLLTGRN 514
++ D ++ +D+ + GTL+ LL+G N
Sbjct: 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 26/95 (27%)
Query: 443 IAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL--NICDQL------- 493
+ +++ GL ++HS + I+H L PS++ ++ + KI GL + D++
Sbjct: 159 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 215
Query: 494 --------------NVRSDIRAFGTLLLHLLTGRN 514
N+ DI + G ++ LLTGR
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 347 AGDWTNVYRGRLNHASVAIK-TLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCI 405
+ T VYRG ++ VA+K L S D + ++ + HP+++ C+E K
Sbjct: 35 GAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQL-LRESDEHPNVIRYF--CTE-KDR 90
Query: 406 VFEYMP----NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 461
F+Y+ L++ + Q+++ + L+ I + + GL+ LHS
Sbjct: 91 QFQYIAIELCAATLQE--YVEQKDFAHLG-------LEPITLLQQTTSGLAHLHSLN--- 138
Query: 462 IVHGSLTPSSILLDR-----NLVAKISGLGLNICDQLNV 495
IVH L P +IL+ + A IS GL C +L V
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGL--CKKLAV 175
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 450 GLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
GL F HS R ++H L P ++L++RN K++ GL
Sbjct: 113 GLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGL 147
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGL 170
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 450 GLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
GL F HS R ++H L P ++L++RN K++ GL
Sbjct: 113 GLGFCHS---RNVLHRDLKPQNLLINRNGELKLADFGL 147
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGL 170
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGL 170
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGL 174
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 450 GLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
GL +LHS + IVH + P ++LL KIS LG+
Sbjct: 121 GLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV 155
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGL 174
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 126 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 168
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 174
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 170
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 446 EVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 488
E+ LGL LHS I++ L P +ILLD K++ GL+
Sbjct: 138 ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 174
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 130 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 172
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 133 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 175
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 126 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 168
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 136 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 178
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 170
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 174
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 133 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 175
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 134 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 176
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 125 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 167
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 174
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 130 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 172
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 148 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGL 190
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 442 HIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 487
+ +++ GL ++HS ++H L PS++LL+ KI GL
Sbjct: 148 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 190
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,137,472
Number of Sequences: 62578
Number of extensions: 756041
Number of successful extensions: 2632
Number of sequences better than 100.0: 432
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 384
Number of HSP's that attempted gapping in prelim test: 2309
Number of HSP's gapped (non-prelim): 560
length of query: 683
length of database: 14,973,337
effective HSP length: 105
effective length of query: 578
effective length of database: 8,402,647
effective search space: 4856729966
effective search space used: 4856729966
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)