Query 005682
Match_columns 683
No_of_seqs 151 out of 753
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 04:28:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a01_A Proton pyrophosphatase; 100.0 5E-224 2E-228 1853.6 54.1 683 1-683 1-683 (766)
2 4av3_A K(+)-stimulated pyropho 100.0 1E-209 4E-214 1756.3 46.0 619 2-683 3-661 (735)
3 2dae_A KIAA0733 protein; mitog 37.3 28 0.00097 29.5 3.6 39 602-640 11-53 (75)
4 4av3_A K(+)-stimulated pyropho 32.5 3.9E+02 0.013 31.3 13.2 79 402-503 83-161 (735)
5 4f0a_B Protein WNT-8, XWNT-8; 30.7 30 0.001 36.5 3.4 23 593-615 18-40 (316)
6 3fss_A Histone chaperone RTT10 20.3 74 0.0025 32.4 3.9 32 606-639 99-130 (237)
7 2keb_A DNA polymerase subunit 19.8 15 0.00051 32.9 -1.1 50 582-640 11-60 (101)
8 2o1k_A NS28, non-structural gl 16.8 67 0.0023 25.4 2.0 17 599-615 3-19 (52)
9 2g04_A Probable fatty-acid-COA 16.7 37 0.0013 36.1 0.8 19 251-272 28-46 (359)
10 2ca5_A MXIH; transport protein 15.6 25 0.00086 30.6 -0.7 13 268-280 38-50 (85)
No 1
>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}
Probab=100.00 E-value=5.5e-224 Score=1853.60 Aligned_cols=683 Identities=88% Similarity=1.345 Sum_probs=623.0
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhheeccCCCCCCCCCCCCCCCCcchhhhhhcCCCchhhcHHHHHHHHH
Q 005682 1 MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSA 80 (683)
Q Consensus 1 ~~~~~~~~~a~~~~~~~~~~~~l~~a~~~~~~v~~v~i~~~~~~~~~~~~~ng~~~~~~~~~~g~~~~~~~~~m~~Is~~ 80 (683)
||.+.+||+++..++++++++|++||+++|++|+|||+++++..+.+++++||+++++.++++|.+++++.+|||||+++
T Consensus 1 ~~~~~~~~~~~~~~i~~~~~~Gi~fa~~~~~~vs~v~~~~~~~~~~~~~~~~g~~~~l~~~~~g~~~~~~~~~m~eIa~a 80 (766)
T 4a01_A 1 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNA 80 (766)
T ss_dssp -CCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCC-------------------------CCHHHHHHHHHHHH
T ss_pred CCcchhhhhhhhhHhHHHHHHHHHHHHHHHHheEeEEecCCccccccccccCCcccccchhhcccchHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999877544445567889999999999998888888999999999
Q ss_pred HHHhhhhhhhhhheehhhHHHHHHHHHHHHhhcccCcccCCCcccccccccccchhhhhhHHHHHHHHHHHHHHHhhhhh
Q 005682 81 ISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLG 160 (683)
Q Consensus 81 I~eGA~afL~~qyk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~laG~iG 160 (683)
|||||++||+||||++++|+++++++|++++.+...++++++++.+++.+.|++++...++++++|++|+++|.++||+|
T Consensus 81 I~eGA~afL~rqYk~i~~~~vv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~~aG~iG 160 (766)
T 4a01_A 81 ISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLG 160 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCCCEEETTEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988766544555677777888888888888888999999999999999999999
Q ss_pred hhhhhhhhHhhHHHHhhCHhHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHhhhcchhhHHHHH
Q 005682 161 MKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF 240 (683)
Q Consensus 161 M~vAt~aN~Rta~aA~~g~~~al~vafr~GsVmGl~vvglgLl~l~~~~~~~~~~~~~~~~~~~~~i~gf~~GaS~iALF 240 (683)
||+|||+|+|||+|||+|+++||++|||+|+||||+|++|||++++++|++|..++++++.+.++++.||+||+|++|||
T Consensus 161 M~vat~ANvRtA~AA~~gl~~al~vAfr~GaVmGl~vvglgLlgl~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iAlF 240 (766)
T 4a01_A 161 MKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALF 240 (766)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHhhcchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998887666666666789999999999999999
Q ss_pred HHhhccccchhhhhcccccchhhcCCCCCCCCCcchhhccccccccccccccchhhhhhHHHHHHHHHHHHHhhcCCCcc
Q 005682 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHE 320 (683)
Q Consensus 241 aRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADLFESy~~si~aamil~~~~~~~~~~~ 320 (683)
+||||||||||||||||||||||+|||||||||||||||||||||||||||+|||||||++++|++|+|+....++.+.+
T Consensus 241 aRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADLFESy~~t~iaamvlg~~~~~~~~~~ 320 (766)
T 4a01_A 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHE 320 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCCTTCTTCTTHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTSHHHHTTC
T ss_pred HHhccchhhhhhhhccccccccccCCCCcCCCCcchhhhhhccccccccccchhHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997542222234
Q ss_pred cccchHhHHHHHHHHHHHHHHHhhhhhhhhcccccCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccccccc
Q 005682 321 FTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVK 400 (683)
Q Consensus 321 ~~~v~~Plli~a~gil~Siig~~~~~~~~~~~~~~~~~~aL~~g~~~s~~l~~i~~~~~~~~~l~~~~~~~~~g~~~~~~ 400 (683)
+..++|||+++++||++|+++++++|++++.++++|+|++||+|+|+|++++++++|++++|++|++++.+..++.+...
T Consensus 321 ~~~v~~PL~i~a~gii~siig~~~v~~~~~~~~~~~~~~aL~~g~~~s~il~~v~~~~~~~~~l~~~~~~~~~~~~~~~~ 400 (766)
T 4a01_A 321 LTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVK 400 (766)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHTTCCCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSEEEEEETTEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeEeeccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccch
Confidence 56799999999999999999999998777788889999999999999999999999999999999876543333333456
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhccCCCchhHHHHhhhccCCchhHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 005682 401 NWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMY 480 (683)
Q Consensus 401 ~~~~f~~~~~Gl~~g~lI~~~TeYyTS~~~~PVr~IA~as~tG~AtnII~Gla~Gm~St~~Pvl~I~~ai~~sy~l~Gly 480 (683)
||++|+|+++|+++|.+|+++||||||++|||||+||++|+||||||||+||++||+||++|+++|++++++||+++|+|
T Consensus 401 ~~~~f~~~~~Gl~~g~lI~~iTeYyTs~~~~PV~~IA~aS~TG~ATnII~GlavGm~St~~Pvl~i~~ai~~sy~l~gly 480 (766)
T 4a01_A 401 SWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMY 480 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHhCcCchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHhhhhccccccccCCcchhhccCCchHHHHHhhhhhccCcccccccchhhHHHHHHHHHHHHHHHH
Q 005682 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV 560 (683)
Q Consensus 481 GialAa~GMLst~~i~la~DayGPIaDNAgGIaEMs~l~~eVR~~tD~LDa~GNTTaAi~KGfaIGSAaL~aLaLf~ay~ 560 (683)
|+|+||+|||||+++++++|+||||+||||||||||+||||||+|||+||++||||||+|||||||||+|+||+||++|+
T Consensus 481 GiAlAa~GMLst~g~~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTaAi~KGfAIGSAaL~AlaLf~ay~ 560 (766)
T 4a01_A 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV 560 (766)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhheeeeeccCCcccCcccHHHHccCcHHHHHHHHhhhhccCchhhhccchhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccceeecCChhHHHHHHhhhhHHHHHHhHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHHh
Q 005682 561 SRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIK 640 (683)
Q Consensus 561 ~~~~~~~~~l~~p~Vl~GlliG~~lpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPDY~~cV~IsT~~Alk 640 (683)
++.++..+|+.||+|++|+|+|+|+|||||+++|+||||+|++|||||||||||||||||||+||||+||||||||+|||
T Consensus 561 ~~~~~~~~~l~~P~Vl~GlliG~mlpflFsa~tm~AVg~AA~~mV~EVRRQFreipGImeg~~kPDY~rcV~I~T~aAlk 640 (766)
T 4a01_A 561 SRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIK 640 (766)
T ss_dssp HHTTCSCCBSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTTTSSCCCHHHHHHHHHHHHHH
T ss_pred HHhccceeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCChHHHHHHHHHHHHH
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhchhhHHHHhHHHHHhhhhhhHHHHHhhhhHHHHHHHhhcC
Q 005682 641 EMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVILEL 683 (683)
Q Consensus 641 eMi~Pgllail~Pi~vG~~~G~~al~GlL~G~~~sG~~lAi~~ 683 (683)
|||.|+++++++|+++|++||+++|+|+|+|+++||++||+||
T Consensus 641 eMi~Pgllav~~Pi~vG~~lG~~al~G~L~G~~vsGv~~Ai~m 683 (766)
T 4a01_A 641 EMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISA 683 (766)
T ss_dssp HTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987
No 2
>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A
Probab=100.00 E-value=1.1e-209 Score=1756.29 Aligned_cols=619 Identities=39% Similarity=0.656 Sum_probs=530.9
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHhheeccCCCCCCCCCCCCCCCCcchhhhhhcCCCchhhcHHHHHHHHHH
Q 005682 2 GSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSAI 81 (683)
Q Consensus 2 ~~~~~~~~a~~~~~~~~~~~~l~~a~~~~~~v~~v~i~~~~~~~~~~~~~ng~~~~~~~~~~g~~~~~~~~~m~~Is~~I 81 (683)
|+.+-+.-....+.+++++++|+|++++++|| +|||+| +||||||+++|
T Consensus 3 ~~~~~~~~~v~~l~~~~~i~~l~~a~~~~~~v-------------------------~~~~~G------~~~M~eIa~~I 51 (735)
T 4av3_A 3 GSHHHHHHYVAALFFLIPLVALGFAAANFAAV-------------------------VRKPEG------TERMKEISSYI 51 (735)
T ss_dssp --------CHHHHHHTHHHHHHHHHHHHHHHH-------------------------HTSCC-------CHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------HcCCCC------CHHHHHHHHHH
Confidence 34444444555666777899999999999987 378899 99999999999
Q ss_pred HHhhhhhhhhhheehhhHHHHHHHHHHHHhhcccCcccCCCcccccccccccchhhhhhHHHHHHHHHHHHHHHhhhhhh
Q 005682 82 SEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGM 161 (683)
Q Consensus 82 ~eGA~afL~~qyk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~laG~iGM 161 (683)
||||++||+||||++++|+++++++++++. +|+++++|++|+++|.+|||+||
T Consensus 52 ~eGA~afL~rqyk~i~~~~vv~~~ll~~~~---------------------------~~~~ai~Fl~Ga~~S~~aGyiGM 104 (735)
T 4av3_A 52 RSGADSFLAHETKAIFKVAIVIAILLMIFT---------------------------TWQTGVAFLLGAVMSASAGIVGM 104 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---------------------------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887753 36899999999999999999999
Q ss_pred hhhhhhhHhhHHHHhh--CHhHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcCC-------------CchhhHHH
Q 005682 162 KIATYANARTTLEARK--SVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGD-------------DWEGLFEA 226 (683)
Q Consensus 162 ~vAt~aN~Rta~aA~~--g~~~al~vafr~GsVmGl~vvglgLl~l~~~~~~~~~~~~~-------------~~~~~~~~ 226 (683)
|+|||+|+|||+|||+ ++++||++|||||+||||+|+||+|+++.++|++|..++++ +..+.+++
T Consensus 105 ~vAt~ANvRTA~AA~~s~~l~~aL~vAFrgGaVmGl~vvgl~Llgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (735)
T 4av3_A 105 KMATRANVRVAEAARTTKKIGPALKVAYQGGSVMGLSVGGFALLGLVLVYLIFGKWMGQVDNLNIYTNWLGINFVPFAMT 184 (735)
T ss_dssp HHHHHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHCSCEECTTSCEECHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCccHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccchhhhHH
Confidence 9999999999999984 58999999999999999999999999999999988543221 12345778
Q ss_pred HhhhcchhhHHHHHHHhhccccchhhhhcccccchhhcCCCCCCCCCcchhhccccccccccccccchhhhhhHHHHHHH
Q 005682 227 ITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAA 306 (683)
Q Consensus 227 i~gf~~GaS~iALFaRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADLFESy~~si~aa 306 (683)
+.||+||+|++|||+|||||||||+||||||||||||+|||||||||||||||||||||||||||||||||||+++++++
T Consensus 185 l~Gfg~GaS~iALFaRvGGGIyTKaADVGADLVGKVEagIPEDDPRNPAvIADNVGDNVGDvAGMgADLFESY~~sivAa 264 (735)
T 4av3_A 185 VSGYALGCSIIAMFDRVGGGVYTKAADMAADLVGKTELNLPEDDPRNPATIADNVGDNVGDVAGLGADLLESFVGAIVSS 264 (735)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC-----------CCTTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HhhhchhHHHHHHHHHHcCcceeccccccchhhhhhhcCCCCCCCCCCchhhhhcccccccccccccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc------CCC--------cccccchHhHHHHHHHHHHHHHHHhhhhhhhhcccccCchHHHHHHHHHHHHHH
Q 005682 307 LVVASISSF------GIN--------HEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLM 372 (683)
Q Consensus 307 mil~~~~~~------~~~--------~~~~~v~~Plli~a~gil~Siig~~~~~~~~~~~~~~~~~~aL~~g~~~s~~l~ 372 (683)
|+|++.... +.+ .....+.|||+++++|+++|++|++++| ..+++++++++||+++|.+++++
T Consensus 265 mvL~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~Pl~i~~~gii~SiiG~~~v~---~~~~~~~~~~~l~~~~~~s~~~s 341 (735)
T 4av3_A 265 IILASYMFPIYVQKIGENLVHQVPKETIQALISYPIFFALVGLGCSMLGILYVI---VKKPSDNPQRELNISLWTSALLT 341 (735)
T ss_dssp HHHHHHHHHHTEEEETTEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HSCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhheee---ecccccchhHHHhhhHHhhHHHH
Confidence 999986421 000 0012477999999999999999999974 23346778999999999999999
Q ss_pred HHHHHHHHHhhcCccccccccccccccchhHHHHHHHHHHHHHHHHHHHhhhhccCCCchhHHHHhhhccCCchhHHhhh
Q 005682 373 TVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGL 452 (683)
Q Consensus 373 ~i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~f~~~~~Gl~~g~lI~~~TeYyTS~~~~PVr~IA~as~tG~AtnII~Gl 452 (683)
+++.++++++++|....... ......+|++|+|+++|+++|++|+++||||||++|||||+|||+|+||||||||+||
T Consensus 342 ~i~~~~~~~~~l~~~~~~~~--~~~~~~~~~~f~~~~iGlv~g~lI~~iTEYYTs~~~~PVr~IA~aS~TG~ATnII~GL 419 (735)
T 4av3_A 342 VVLTAFLTYFYLKDLQGLDV--LGFRFGAISPWFSAIIGIFSGILIGFWAEYYTSYRYKPTQFLGKSSIEGTGMVISNGL 419 (735)
T ss_dssp HHHHHHHHHHHHTTCSSHHH--HTCTTGGGHHHHHHHHHHHHHHHHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhccc--ccccccchHHHHHHHHHHHHHHHHHHheeeecCCCCchHHHHHHhCCCcHHHHHHHHH
Confidence 99999999999876322111 1123457899999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccccccccCCcchhhccCCchHHHHHhhhhhcc
Q 005682 453 ALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAA 532 (683)
Q Consensus 453 a~Gm~St~~Pvl~I~~ai~~sy~l~GlyGialAa~GMLst~~i~la~DayGPIaDNAgGIaEMs~l~~eVR~~tD~LDa~ 532 (683)
++||+||+||+++|+++|+.||+++|+||+++||+|||||+++++++|+||||+||||||||||+||||||||||+||++
T Consensus 420 avGm~St~~pvl~I~~~I~~s~~~aGlyGiaiAa~GMLst~gi~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDav 499 (735)
T 4av3_A 420 SLGMKSVFPPTLTLVLGILFADYFAGLYGVAIAALGMLSFVATSVSVDSYGPIADNAGGISEMCELDPEVRKITDHLDAV 499 (735)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccceEeeecccCccCCccchHHHccCChHHHHhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccchhhHHHHHHHHHHHHHHHHhhh-----------ccceeecCChhHHHHHHhhhhHHHHHHhHhHHHHHHHH
Q 005682 533 GNTTAAIGKGFAIGSAALVSLALFGAFVSRA-----------GITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAA 601 (683)
Q Consensus 533 GNTTaAi~KGfaIGSAaL~aLaLf~ay~~~~-----------~~~~~~l~~p~Vl~GlliG~~lpflFsal~m~aVg~aA 601 (683)
||||||++||||||||+|+||+||++|+++. ....+|+.||+|++|+|+|+|+|||||+++|+||||+|
T Consensus 500 GNTTkAi~KGfAIGSAaL~AlaLfaay~~~~~~~~~~~~~~~~~~~~~l~~P~VlvGlliGgmlpflFsaltm~AVgrAA 579 (735)
T 4av3_A 500 GNTTAAIGKGFAIGSAIFAALSLFASYMFSQISPSDIGKPPSLVLLLNMLDARVIAGALLGAAITYYFSGYLISAVTKAA 579 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSSSCGGGTSCCBTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhHhHHHHHHHHHHHHHHHHHhhhhhhccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998532 12358999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHHhhhhchhhHHHHhHHHHHhhhhhhHHHHHhhhhHHHHHHHhh
Q 005682 602 LKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVIL 681 (683)
Q Consensus 602 ~~mV~EVRRQFreipGi~eg~~kPDY~~cV~IsT~~AlkeMi~Pgllail~Pi~vG~~~G~~al~GlL~G~~~sG~~lAi 681 (683)
++|||||||||||||||||||+||||+||||||||+||||||+|++|++++|+++|+++|+++|+|+|+|++++|++||+
T Consensus 580 ~~mV~EVRRQFreipGimeg~~kPdy~~cV~I~T~~AlkeMi~p~~l~v~~P~~vg~~~g~~~l~g~L~g~~v~G~~~Ai 659 (735)
T 4av3_A 580 MKMVDEIRRQAREIPGLLEGKAKPDYNRCIEITSDNALKQMGYPAFIAILTPLVTGFLLGAEFVGGVLIGTVLSGAMLAI 659 (735)
T ss_dssp HHHHTC-------------------CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcccCCCCCChHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC
Q 005682 682 EL 683 (683)
Q Consensus 682 ~~ 683 (683)
||
T Consensus 660 ~m 661 (735)
T 4av3_A 660 LT 661 (735)
T ss_dssp HH
T ss_pred HH
Confidence 97
No 3
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.28 E-value=28 Score=29.46 Aligned_cols=39 Identities=13% Similarity=0.464 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhccCCCCCC----CCCCCChhhHHHHHHHHHHh
Q 005682 602 LKMVEEVRRQFNTIPGLME----GTTKPDYATCVKISTDASIK 640 (683)
Q Consensus 602 ~~mV~EVRRQFreipGi~e----g~~kPDY~~cV~IsT~~Alk 640 (683)
++|..|+|+.|.|+|-=.- -+..-+-+.|.++-+|-+=|
T Consensus 11 ~qvfheLkQrFPEvPd~VVsqc~~qN~~Nl~aC~~~L~qES~k 53 (75)
T 2dae_A 11 FQVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLSQESTR 53 (75)
T ss_dssp HHHHHHHHHHSSSSCHHHHHHHHTTTTSCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcHHHHHHHHHHhccCHHHHHHHHHHhccc
Confidence 5799999999999994210 14566778999998887765
No 4
>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A
Probab=32.49 E-value=3.9e+02 Score=31.31 Aligned_cols=79 Identities=19% Similarity=0.297 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccCCCchhHHHHhhhccCCchhHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 005682 402 WQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYG 481 (683)
Q Consensus 402 ~~~f~~~~~Gl~~g~lI~~~TeYyTS~~~~PVr~IA~as~tG~AtnII~Gla~Gm~St~~Pvl~I~~ai~~sy~l~GlyG 481 (683)
|..-.|-++|-+.+.+-|++-=+= + .+..+| .|++++++... .=+.=+||.-+.+.|
T Consensus 83 ~~~ai~Fl~Ga~~S~~aGyiGM~v-A-t~ANvR-TA~AA~~s~~l--------------------~~aL~vAFrgGaVmG 139 (735)
T 4av3_A 83 WQTGVAFLLGAVMSASAGIVGMKM-A-TRANVR-VAEAARTTKKI--------------------GPALKVAYQGGSVMG 139 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHH-HHHHTTTTCSS--------------------HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHH-HHHHHhhcCCc--------------------cHHHHhhhccchHHH
Confidence 444566777777777766664332 1 123444 56666543211 113345677788899
Q ss_pred HHHHHHHHhhhhhHhhhhcccc
Q 005682 482 IAVAALGMLSTIATGLAIDAYG 503 (683)
Q Consensus 482 ialAa~GMLst~~i~la~DayG 503 (683)
..++.+|.|....+-+-...+-
T Consensus 140 l~vvgl~Llgl~~~~~~~~~~~ 161 (735)
T 4av3_A 140 LSVGGFALLGLVLVYLIFGKWM 161 (735)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999988877766654443
No 5
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis}
Probab=30.69 E-value=30 Score=36.46 Aligned_cols=23 Identities=30% Similarity=0.211 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhccC
Q 005682 593 TMKSVGSAALKMVEEVRRQFNTI 615 (683)
Q Consensus 593 ~m~aVg~aA~~mV~EVRRQFrei 615 (683)
.|.+|+++|..-++|++.|||..
T Consensus 18 ~~~~v~~Ga~~~i~ECq~QFr~~ 40 (316)
T 4f0a_B 18 YSASVAVGAQNGIEECKYQFAWE 40 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 58899999999999999999964
No 6
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=20.27 E-value=74 Score=32.37 Aligned_cols=32 Identities=28% Similarity=0.591 Sum_probs=25.7
Q ss_pred HHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHH
Q 005682 606 EEVRRQFNTIPGLMEGTTKPDYATCVKISTDASI 639 (683)
Q Consensus 606 ~EVRRQFreipGi~eg~~kPDY~~cV~IsT~~Al 639 (683)
+.+..||.+ .|.++.+.+ ||++|+|-..|-+.
T Consensus 99 ~~~~kq~~~-~g~~~~~~~-~f~~~i~~~~rQ~~ 130 (237)
T 3fss_A 99 ENTLNQFKK-LGLLDSNVT-DFEKCVEYIRKQAI 130 (237)
T ss_dssp HHHHHHHHH-TTSSCTTCC-CTHHHHHHHHHHHH
T ss_pred HHhhhhhhh-cCCCcccch-hHHHHHHHHHHHHh
Confidence 457899998 688888777 99999998866554
No 7
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=19.78 E-value=15 Score=32.90 Aligned_cols=50 Identities=14% Similarity=0.229 Sum_probs=26.9
Q ss_pred hhhHHHHHHhHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHHh
Q 005682 582 GAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIK 640 (683)
Q Consensus 582 G~~lpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPDY~~cV~IsT~~Alk 640 (683)
|..+-.+|.+-.|.+|. .+++++||.|. || +=. +.-..||+++|..+.+.
T Consensus 11 ~~~~~~~~~~~~~~~Vs------ae~L~eEfdef-Gi-~~~-d~VldKc~ELC~~y~ld 60 (101)
T 2keb_A 11 GSSLEVLFQGPGSMSAS------AQQLAEELQIF-GL-DCE-EALIEKLVELCVQYGQN 60 (101)
T ss_dssp -------------CCCC------HHHHHHHHHHH-TC-BCC-HHHHHHHHHHHHHHTCC
T ss_pred CccchheeeCCchhhcc------HHHHHHHHHHc-CC-CCC-HHHHHHHHHHHHHcCCC
Confidence 45566677777777775 58999999984 33 111 13479999999999885
No 8
>2o1k_A NS28, non-structural glycoprotein NSP4; rotavirus enterotoxin, nonstructural protein, tetramer coiled-coil, virulence, viral protein; 1.67A {Simian rotavirus A} PDB: 2o1j_A 1g1j_A* 1g1i_A* 3miw_B
Probab=16.75 E-value=67 Score=25.44 Aligned_cols=17 Identities=35% Similarity=0.544 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHhhccC
Q 005682 599 SAALKMVEEVRRQFNTI 615 (683)
Q Consensus 599 ~aA~~mV~EVRRQFrei 615 (683)
+.+.++|.|.|||.+-|
T Consensus 3 ~~mdrivkemrrQl~mI 19 (52)
T 2o1k_A 3 KQMDRVVKEMRRQLEMI 19 (52)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 45789999999998644
No 9
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis}
Probab=16.74 E-value=37 Score=36.08 Aligned_cols=19 Identities=47% Similarity=0.686 Sum_probs=15.7
Q ss_pred hhhhcccccchhhcCCCCCCCC
Q 005682 251 AADVGADLVGKVERNIPEDDPR 272 (683)
Q Consensus 251 AADVGADLVGKVEagIPEDDPR 272 (683)
=||.|||.+ |||. |.||+|
T Consensus 28 LAdlGAeVI-KVE~--pgd~~~ 46 (359)
T 2g04_A 28 LADLGADVV-RVRR--PGGLTM 46 (359)
T ss_dssp HHHTTCEEE-EEEC--TTCCCS
T ss_pred HHHcCCcEE-EEcC--CCCCcc
Confidence 389999999 9996 667775
No 10
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=15.55 E-value=25 Score=30.55 Aligned_cols=13 Identities=31% Similarity=0.759 Sum_probs=10.5
Q ss_pred CCCCCCcchhhcc
Q 005682 268 EDDPRNPAVIADN 280 (683)
Q Consensus 268 EDDPRNPavIADn 280 (683)
|+||.||+..|+.
T Consensus 38 ~~~PsnPa~LAey 50 (85)
T 2ca5_A 38 AKNPSNPQLLAEY 50 (85)
T ss_dssp HHCTTCHHHHHHH
T ss_pred HcCCCCHHHHHHH
Confidence 5799999988763
Done!