Query 005684
Match_columns 683
No_of_seqs 309 out of 1317
Neff 4.9
Searched_HMMs 46136
Date Thu Mar 28 12:11:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005684.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005684hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02910 polygalacturonate 4-a 100.0 6E-168 1E-172 1381.1 44.4 619 63-683 25-657 (657)
2 PLN02829 Probable galacturonos 100.0 4E-138 9E-143 1145.6 37.9 463 216-682 176-638 (639)
3 PLN02769 Probable galacturonos 100.0 1E-135 2E-140 1132.6 42.2 473 195-682 154-629 (629)
4 PLN02742 Probable galacturonos 100.0 2E-130 4E-135 1075.4 36.5 464 215-682 66-534 (534)
5 PLN02718 Probable galacturonos 100.0 1E-123 3E-128 1032.5 39.7 441 218-683 160-603 (603)
6 PLN02870 Probable galacturonos 100.0 3E-112 7E-117 929.7 30.7 426 249-683 90-532 (533)
7 PLN02867 Probable galacturonos 100.0 2E-110 5E-115 918.2 30.0 419 257-682 94-534 (535)
8 PLN02659 Probable galacturonos 100.0 3E-110 6E-115 914.6 29.7 410 267-683 107-533 (534)
9 PLN02523 galacturonosyltransfe 100.0 9E-109 2E-113 905.0 34.2 459 222-682 81-558 (559)
10 cd06429 GT8_like_1 GT8_like_1 100.0 3.3E-56 7.2E-61 459.4 21.9 255 372-670 1-257 (257)
11 PRK15171 lipopolysaccharide 1, 100.0 2.8E-42 6.1E-47 367.7 19.9 260 369-676 23-292 (334)
12 cd06431 GT8_LARGE_C LARGE cata 100.0 5.5E-40 1.2E-44 342.7 19.5 261 374-678 5-277 (280)
13 cd00505 Glyco_transf_8 Members 100.0 2E-38 4.4E-43 322.2 19.3 237 372-655 1-246 (246)
14 cd04194 GT8_A4GalT_like A4GalT 100.0 8.9E-38 1.9E-42 316.5 17.2 237 372-655 1-248 (248)
15 COG1442 RfaJ Lipopolysaccharid 100.0 9E-37 1.9E-41 323.7 19.2 257 371-676 2-267 (325)
16 PF01501 Glyco_transf_8: Glyco 100.0 3E-35 6.6E-40 291.2 14.3 245 373-656 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 9.2E-31 2E-35 275.5 19.9 250 372-672 1-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 1.5E-30 3.3E-35 267.4 14.5 231 373-649 2-240 (248)
19 cd02537 GT8_Glycogenin Glycoge 99.9 1.3E-24 2.8E-29 221.5 16.6 214 379-669 10-237 (240)
20 PLN00176 galactinol synthase 99.9 1.3E-22 2.9E-27 216.5 19.1 169 487-671 100-293 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.7 3.8E-17 8.3E-22 171.1 9.0 141 483-657 76-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.1 6.2E-11 1.3E-15 140.6 6.5 256 367-669 1177-1443(1470)
23 COG5597 Alpha-N-acetylglucosam 97.5 3.7E-05 8.1E-10 81.7 2.2 93 487-582 155-276 (368)
24 PF03407 Nucleotid_trans: Nucl 93.8 0.13 2.9E-06 51.3 6.4 141 484-649 48-202 (212)
25 PLN03182 xyloglucan 6-xylosylt 92.2 0.74 1.6E-05 51.6 9.6 163 481-667 179-376 (429)
26 PF11051 Mannosyl_trans3: Mann 84.3 2.5 5.4E-05 44.7 6.8 35 489-523 79-113 (271)
27 PF10819 DUF2564: Protein of u 75.5 6.2 0.00013 34.9 5.1 69 252-321 6-78 (79)
28 PF05637 Glyco_transf_34: gala 68.0 3.5 7.6E-05 43.0 2.3 23 498-520 74-96 (239)
29 KOG1928 Alpha-1,4-N-acetylgluc 58.1 5.2 0.00011 44.8 1.5 33 486-522 227-259 (409)
30 TIGR02977 phageshock_pspA phag 54.3 22 0.00049 36.5 5.3 109 217-325 25-137 (219)
31 KOG1950 Glycosyl transferase, 50.2 30 0.00065 38.3 5.8 152 498-656 122-289 (369)
32 PF04012 PspA_IM30: PspA/IM30 45.6 38 0.00081 34.5 5.3 110 217-326 24-137 (221)
33 COG4575 ElaB Uncharacterized c 44.0 74 0.0016 29.8 6.3 76 248-325 11-87 (104)
34 PRK10698 phage shock protein P 39.9 51 0.0011 34.2 5.3 110 217-326 25-138 (222)
35 PRK10132 hypothetical protein; 37.7 1.2E+02 0.0025 28.5 6.7 76 248-325 15-90 (108)
36 PF04488 Gly_transf_sug: Glyco 35.8 18 0.0004 32.4 1.2 35 483-521 62-97 (103)
37 PF03071 GNT-I: GNT-I family; 29.7 1.3E+02 0.0029 34.6 6.9 41 482-522 171-213 (434)
38 PLN03181 glycosyltransferase; 29.4 56 0.0012 37.4 3.8 35 481-516 180-214 (453)
39 PF11464 Rbsn: Rabenosyn Rab b 28.7 95 0.0021 24.6 3.8 38 228-265 1-38 (42)
40 PF03314 DUF273: Protein of un 28.2 38 0.00082 35.4 2.0 24 493-516 34-57 (222)
41 KOG2129 Uncharacterized conser 24.4 2.8E+02 0.006 32.0 7.9 37 210-247 205-243 (552)
42 cd02514 GT13_GLCNAC-TI GT13_GL 22.5 3E+02 0.0065 30.6 7.8 54 482-535 77-136 (334)
43 PRK10807 paraquat-inducible pr 21.8 1.8E+02 0.004 34.3 6.3 21 252-272 476-496 (547)
44 PF09738 DUF2051: Double stran 21.1 1.1E+03 0.024 25.9 11.9 26 163-188 7-32 (302)
45 PRK10404 hypothetical protein; 20.1 3.5E+02 0.0075 25.0 6.5 80 244-325 4-84 (101)
No 1
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=5.8e-168 Score=1381.10 Aligned_cols=619 Identities=58% Similarity=1.023 Sum_probs=588.6
Q ss_pred chhHHHHHHHh--hhhhccchhhHHHhhcccCCCcceeccccccCCCCcccEEeccccccccccccCCCc----------
Q 005684 63 NVHWRERLALR--YIKSLLSKDVIDVIAASTVDLGPLSLDSLRKSNMSASWKFVGAETSVENNATSEPNQ---------- 130 (683)
Q Consensus 63 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 130 (683)
+.+..+..+.+ +++++.++++|||++|||+..|.++|..|++.+||+||++++|..++++++......
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (657)
T PLN02910 25 DNNLDEVYASSAAGVGNDPDEKDINIVATYSDTSGNIRLGRVKMKDLSASWVLENPADKVHDQPKGSQRLEDSSSFQNGT 104 (657)
T ss_pred cccccccccccCcccCCCccccchhhheeeecccccEEEEeeeeccccchhhhcCccccccCcccccccccchhhhccCc
Confidence 33444455555 788899999999999999999999999999999999999999999999988443222
Q ss_pred -hhhhhhhcCCCCCCCCCccCCCC-cccCChHHHHHHHHHHHHHHHHhhhhhhcchHHHHHHHHHHHhhhcccCcccccc
Q 005684 131 -KAVRIEKEAPKGKGDNILADGHS-QLVDTPAKQFRRQLRERRREKRAADLVQQDDEAIVKLENAAIERSKSVDSAVLGK 208 (683)
Q Consensus 131 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 208 (683)
..+.+.++ +..+.+++|.+++ ..+++|+||+||++|++||+.|++||+|||+|++.++|++||||||++|+.++||
T Consensus 105 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~d~~~~g~ 182 (657)
T PLN02910 105 GEEDNVSHS--TTNQTDESGIQFPNKLPASPVKLQRQILRQERRDLRTAELIQQDKEADSQTQAAAIERSKSLDTSVKGK 182 (657)
T ss_pred ccccchhhh--hhhccccccccCcccCCCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhhhHHHhhhhhccCcccccc
Confidence 12333333 5788899999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCChhhHHHHhhhHHHHHHhhhhccccCCCchHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHH
Q 005684 209 YSIWRKENENDNSDSTVRLMRDQMIMARVYLSIAKMKNKPDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQV 288 (683)
Q Consensus 209 y~~w~~~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~l~~~~~~~~~~m~~~ 288 (683)
|||||+||+++|+|++||+|||||||||||++|||++||++|+|||++||||+||+||+|++|+|||+++.++|++|+++
T Consensus 183 y~~w~~e~~~~~~d~~vk~lkDQl~~AkaY~~iak~~~~~~l~~eL~~~i~e~~r~ls~a~~d~dlp~~~~~k~~~M~~~ 262 (657)
T PLN02910 183 YSIWRRDYESPNSDSILKLMRDQIIMAKAYANIAKSNNVTNLYVSLMKQFRENKRAIGEATSDAELHSSALDQAKAMGHV 262 (657)
T ss_pred eeeecccccccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhcccccccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccchHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhcccCCCCcccchhhhhhhhhcCCcccCCCCCCCCCCC
Q 005684 289 LSKAREQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEKRKFPGSENLEN 368 (683)
Q Consensus 289 ~~~ak~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~~laa~~~Pk~lhCL~~rLt~e~~~~~~~~~~~~~~~~l~d 368 (683)
|++||+++|||++|++||||||+++||+++++++|++|++||||+|+|||||||+||||.|||++++.++++|++++|+|
T Consensus 263 l~~ak~~~~d~~~~~~KLraml~~~Ee~~~~~k~qs~~l~qlaa~t~PK~lHCL~mRLt~Ey~~~~~~~~~~p~~~~l~d 342 (657)
T PLN02910 263 LSIAKDQLYDCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVNKKKLED 342 (657)
T ss_pred HHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEecCCccchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhh
Q 005684 369 PNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVL 448 (683)
Q Consensus 369 p~~~HIai~sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvL 448 (683)
|+++|||+||||+||+||||||++.|+++|+++|||||||++|+.+|++||++||+++|+|||+|+|+|+|++.+|+|+|
T Consensus 343 p~l~Hy~ifSDNVLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl 422 (657)
T PLN02910 343 PSLYHYAIFSDNVLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVL 422 (657)
T ss_pred CcceeEEEEecceeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCC
Q 005684 449 RQLESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGK 528 (683)
Q Consensus 449 kqles~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gk 528 (683)
+||++..+++|||..+++.....+..+++|++|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+
T Consensus 423 ~qles~~~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~ 502 (657)
T PLN02910 423 RQLESARIKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGM 502 (657)
T ss_pred HHHhhhhhhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCc
Confidence 99999999999998776655444567899999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhh
Q 005684 529 VNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGL 608 (683)
Q Consensus 529 viGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~n 608 (683)
++|||+||...|+++..+++|++|.+..+|+++.||||+|||||||++||++++|+.++.|++.+.+..+|++|+||+++
T Consensus 503 v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgL 582 (657)
T PLN02910 503 VNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGL 582 (657)
T ss_pred eEEEecccchhhhhhhhhhccCChhhhhccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHH
Confidence 99999999988889999999999999889999999999999999999999999999999999998888999999999999
Q ss_pred hhhccceeecccccccccCCCCCCcccccCCCceEEEccCCCCCcccccccccHHHHHHHHhCCCCccccccCCC
Q 005684 609 ITFYNLTHPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKYDHPYLRNCNLNE 683 (683)
Q Consensus 609 l~F~g~i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~d~pfl~~Cni~~ 683 (683)
++|+|++++||.+||++|+||++.+..+.+++|+||||+|++|||++.++++|+++|.+|++++++||++|||+|
T Consensus 583 LvF~g~i~pLD~rWNv~GLGyd~~v~~~~i~~AAVLHynG~~KPWl~l~i~~Yr~~W~kYl~~d~~fl~~Cni~~ 657 (657)
T PLN02910 583 ITFYNLTYPLDRSWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAIAKYKPYWSRYVQYDNPYLQLCNISE 657 (657)
T ss_pred HHHhCceeecCchheecCCCCCcccccccccCcEEEEeCCCCCcccccCcccchHHHHHHccCCChHHHhCCCCC
Confidence 999999999999999999999988877889999999999999999999999999999999999999999999987
No 2
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=4.2e-138 Score=1145.63 Aligned_cols=463 Identities=65% Similarity=1.176 Sum_probs=449.9
Q ss_pred cCCCChhhHHHHhhhHHHHHHhhhhccccCCCchHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHHhhcc
Q 005684 216 NENDNSDSTVRLMRDQMIMARVYLSIAKMKNKPDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQ 295 (683)
Q Consensus 216 ~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~l~~~~~~~~~~m~~~~~~ak~~ 295 (683)
.+++|+|++||+|||||||||||++|||++||++|+||||+||||+||+||||++|+|||+++.++|++|+++|++||++
T Consensus 176 ~~~~~~d~~v~~lkDql~~AkaY~~iak~~~~~~l~~el~~~i~e~~r~l~~a~~d~~lp~~~~~~~~~m~~~i~~ak~~ 255 (639)
T PLN02829 176 DQTVMPDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASKDSDLPKNANEKLKAMEQTLAKGKQM 255 (639)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHhc
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhcccCCCCcccchhhhhhhhhcCCcccCCCCCCCCCCCCCceeEE
Q 005684 296 LYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEKRKFPGSENLENPNLYHYA 375 (683)
Q Consensus 296 ~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~~laa~~~Pk~lhCL~~rLt~e~~~~~~~~~~~~~~~~l~dp~~~HIa 375 (683)
+|||+++++||||||+++||++++|++|++|++||||+|+|||||||+||||.|||.+++.++++|++++|+||+++|||
T Consensus 256 ~~d~~~~~~KLr~~l~~~Ee~~~~~~~q~~~l~~laa~t~PK~lHCL~mrLt~Ey~~~~~~~~~~p~~~~l~dp~l~Hy~ 335 (639)
T PLN02829 256 QDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTLPKGLHCLPLRLTTEYYNLNSSEQQFPNQEKLEDPQLYHYA 335 (639)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhhHHHHHhCChhhccCCChhhccCCccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhhhhcccc
Q 005684 376 LFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLRQLESAS 455 (683)
Q Consensus 376 i~sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLkqles~~ 455 (683)
+||||+||+||||||++.|+++|+++|||||||++|+++|++||++||+++|+|||+|+|+|+|++.+|+|+|+||++..
T Consensus 336 ifSdNVLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~f~wln~~~~pvl~ql~~~~ 415 (639)
T PLN02829 336 LFSDNVLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTWLNSSYSPVLKQLGSQS 415 (639)
T ss_pred EEecceeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEEEEehhhcccccccccHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeec
Q 005684 456 MKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVET 535 (683)
Q Consensus 456 ~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~D 535 (683)
++.|||.....+ ...+++|++|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+|
T Consensus 416 ~~~~yf~~~~~~----~~~~~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVed 491 (639)
T PLN02829 416 MIDYYFRAHRAN----SDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVET 491 (639)
T ss_pred hhhhhhhccccC----cccccccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEecc
Confidence 999999864432 3467899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhhhhhccce
Q 005684 536 CGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGLITFYNLT 615 (683)
Q Consensus 536 c~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~nl~F~g~i 615 (683)
|...|++|..+++|++|.+..+|++..||||+|||||||++||+++++++|++|++.+.++.+|++|+||+++++|+|++
T Consensus 492 c~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i 571 (639)
T PLN02829 492 CGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRT 571 (639)
T ss_pred chhhhhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCce
Confidence 99888899999999999988899999999999999999999999999999999999988888999999999999999999
Q ss_pred eecccccccccCCCCCCcccccCCCceEEEccCCCCCcccccccccHHHHHHHHhCCCCccccccCC
Q 005684 616 HPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKYDHPYLRNCNLN 682 (683)
Q Consensus 616 ~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~d~pfl~~Cni~ 682 (683)
++||++||++|+||++.+..+.+++++||||+|++|||++.++++|+++|.+|++++++||++||||
T Consensus 572 ~~LD~rWNv~GLGy~~~v~~~~i~~aaIIHynG~~KPWle~~i~~yr~lW~kYl~~~~~fl~~Cni~ 638 (639)
T PLN02829 572 YPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNMKPWLEIGIPKYRNYWSKYVDYDQVYLRECNIN 638 (639)
T ss_pred EecChhheecCCCCCcccchhcccCCeEEEECCCCCccccCCcccchHHHHHHHhcCchHHHhCCCC
Confidence 9999999999999998877788999999999999999999999999999999999999999999997
No 3
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=1.1e-135 Score=1132.65 Aligned_cols=473 Identities=38% Similarity=0.709 Sum_probs=440.6
Q ss_pred HhhhcccCccccccccccccccCCCChhhHHHHhhhHHHHHHhh-hhccccCCCchHHHHHHHHHHHHHHHhccccCCCC
Q 005684 195 IERSKSVDSAVLGKYSIWRKENENDNSDSTVRLMRDQMIMARVY-LSIAKMKNKPDLQQELQSRLKESQRALGDTAADAD 273 (683)
Q Consensus 195 ~~~~~~~~~~~~g~y~~w~~~~~~~~~d~~~~~~~dq~~~a~~y-~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~ 273 (683)
.|.+|+|+ .+||||||||+||++.|+|++||+||||||||||| ++|||++||++|+|||++||||+||+||||++|+|
T Consensus 154 ~e~~~~c~-~~~g~y~~w~~e~~~~~~d~~~~~l~Dql~~Ak~y~~~iak~~~~~~l~~el~~~i~e~~~~l~~~~~d~d 232 (629)
T PLN02769 154 DENEKSCE-LEFGSYCLWSEEHKEVMKDSIVKRLKDQLFVARAYYPSIAKLPGQEKLTRELKQNIQEHERVLSESITDAD 232 (629)
T ss_pred ccccccce-eeccceeeecccccccCcHHHHHHHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 34555555 58999999999999999999999999999999998 79999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhcccCCCCcccchhhhhhhhhcC
Q 005684 274 LHHSVPEKIKLMGQVLSKAREQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLL 353 (683)
Q Consensus 274 l~~~~~~~~~~m~~~~~~ak~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~~laa~~~Pk~lhCL~~rLt~e~~~~ 353 (683)
||+++.++|++|+++|++||++.|||.+|++||||||+++|||++++++|++|++||||+|+|||||||+||||+|||++
T Consensus 233 lp~~~~~~~~~m~~~~~~ak~~~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~PK~lHCL~mrLt~ey~~~ 312 (629)
T PLN02769 233 LPPFIQKKLEKMEQTIARAKSCPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMPKSHHCLSMRLTVEYFKS 312 (629)
T ss_pred CChhHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCCCCCceeEEEecCCccchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEee
Q 005684 354 PPEKRKFPGSENLENPNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVEN 433 (683)
Q Consensus 354 ~~~~~~~~~~~~l~dp~~~HIai~sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~n 433 (683)
++.++++|++++|+||+++|||+||||++|++||||||+.|+++|+++|||||||++|+++|++||++|++++|+|||+|
T Consensus 313 ~~~~~~~~~~~~l~d~~l~Hy~ifSdNvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n 392 (629)
T PLN02769 313 SSLDMEDSNSEKFSDPSLRHYVIFSKNVLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLN 392 (629)
T ss_pred chhhccCCchhhccCCccceEEEEeccceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhcccccchhhhhhcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEE
Q 005684 434 VDEFKWLNSSYCPVLRQLESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVV 513 (683)
Q Consensus 434 ve~f~wl~~~y~pvLkqles~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV 513 (683)
+|+|+|.+. .+|+++|+++.....++|..... ...++++|+|+|+++|+|||||++||+++||||||+||||
T Consensus 393 ~e~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVV 464 (629)
T PLN02769 393 IEDLILKDL-DKFALKQLSLPEEFRVSFRSVDN-------PSSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVV 464 (629)
T ss_pred eeeeeeccc-chHHHHhhccchhhhhhhccCCC-------CchhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEe
Confidence 999999765 58999999988765555543321 1235678999999999999999999999999999999999
Q ss_pred eccchHHhccCCCCCeEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHc
Q 005684 514 QKDLTRLWSVDLQGKVNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMN 593 (683)
Q Consensus 514 ~~DLseLw~iDL~gkviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~ 593 (683)
++||++||++||+|+++|||+||...+.++..|++ ..+|+++.||||+|||||||++||++++++++++|++.+
T Consensus 465 qgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~------~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~ 538 (629)
T PLN02769 465 QRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLG------DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKF 538 (629)
T ss_pred cCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhc------ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHh
Confidence 99999999999999999999999765555555543 346888899999999999999999999999999998764
Q ss_pred -C-CCccccCCCcchhhhhhccceeecccccccccCCCCCCcccccCCCceEEEccCCCCCcccccccccHHHHHHHHhC
Q 005684 594 -E-DRTLWKLGTLPPGLITFYNLTHPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKY 671 (683)
Q Consensus 594 -~-d~~l~~~gdLp~~nl~F~g~i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~ 671 (683)
. +...|++++||++|++|+|++++||.+||++++||++.+..+.+++|+||||+|++|||++.+.++|+++||+|+++
T Consensus 539 ~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~i~~~~i~~paIIHYnG~~KPW~e~~i~~yr~~W~kYl~~ 618 (629)
T PLN02769 539 SKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGIDEQAIKKAAVLHYNGNMKPWLELGIPKYKKYWKRFLNR 618 (629)
T ss_pred hhcccccccccCcCHHHHHhcCeEEECCHHHccccccccccccccccCCcEEEEECCCCCCccCCCCChHHHHHHHHhcc
Confidence 3 35689999999999999999999999999999999887777778999999999999999999999999999999999
Q ss_pred CCCccccccCC
Q 005684 672 DHPYLRNCNLN 682 (683)
Q Consensus 672 d~pfl~~Cni~ 682 (683)
+++|||+||||
T Consensus 619 ~~~fl~~Cni~ 629 (629)
T PLN02769 619 DDRFMDECNVN 629 (629)
T ss_pred CChHHhhCCCC
Confidence 99999999996
No 4
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=1.8e-130 Score=1075.38 Aligned_cols=464 Identities=49% Similarity=0.931 Sum_probs=446.2
Q ss_pred ccCCCChhhHHHHhhhHHHHHHhhhhccccCCCchHHHHHHHHHHHHHHHhccccCCCCC--CCCHHHHHHHHHHHHHHh
Q 005684 215 ENENDNSDSTVRLMRDQMIMARVYLSIAKMKNKPDLQQELQSRLKESQRALGDTAADADL--HHSVPEKIKLMGQVLSKA 292 (683)
Q Consensus 215 ~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~l--~~~~~~~~~~m~~~~~~a 292 (683)
-+|.+++|++||+|||||||||||++|||++||++|+|||++||||+||+||+|++|+++ |+++.++|++|+++|++|
T Consensus 66 ~~~~~~~~~~~~~l~dql~~Ak~y~~ia~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~~~~~~~~~~~~~~m~~~i~~a 145 (534)
T PLN02742 66 TEEMLSATSFSRQLADQITLAKAYVVIAKEHNNLQLAWELSAQIRNCQLLLSKAATRGEPITVEEAEPIIRDLAALIYQA 145 (534)
T ss_pred hhhhcChHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999986 489999999999999999
Q ss_pred hccccchHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhcccCCCCcccchhhhhhhhhcCCccc---CCCCCCCCCCCC
Q 005684 293 REQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEK---RKFPGSENLENP 369 (683)
Q Consensus 293 k~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~~laa~~~Pk~lhCL~~rLt~e~~~~~~~~---~~~~~~~~l~dp 369 (683)
|+++|||+++++||||||+++|||++++++|++|++||||+|+|||||||+||||+|||++++.+ +++|++++|+||
T Consensus 146 k~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~ 225 (534)
T PLN02742 146 QDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVDN 225 (534)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchHhHHHHHhCchhhhccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999885 446778899999
Q ss_pred CceeEEEecCCccchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhh
Q 005684 370 NLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLR 449 (683)
Q Consensus 370 ~~~HIai~sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLk 449 (683)
+++|||+||||++|++||||||+.|+++|+++|||||||++++.+|++||+.|++++++|+|+|+++|+|++.+|+|+|+
T Consensus 226 ~l~Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ 305 (534)
T PLN02742 226 NLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLK 305 (534)
T ss_pred CcceEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCe
Q 005684 450 QLESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKV 529 (683)
Q Consensus 450 qles~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkv 529 (683)
||++..++.|||..+.. ++..+.++++|+|+|+++|+||+||++||+++||||||+|+||++||++||++||+|++
T Consensus 306 ql~~~~~~~~yf~~~~~----~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~v 381 (534)
T PLN02742 306 QLQDSDTQSYYFSGSQD----DGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNV 381 (534)
T ss_pred Hhhhhhhhhhhcccccc----cccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCE
Confidence 99999999999986552 23456788999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhhh
Q 005684 530 NGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGLI 609 (683)
Q Consensus 530 iGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~nl 609 (683)
+|||+||+..+++|..|+||++|.++.+|+++.||||+|||||||++||++++++.++.|++.+.+..+|++|+||++++
T Consensus 382 iaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LL 461 (534)
T PLN02742 382 NGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLL 461 (534)
T ss_pred EEEeCchhhhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHH
Confidence 99999998889999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred hhccceeecccccccccCCCCCCcccccCCCceEEEccCCCCCcccccccccHHHHHHHHhCCCCccccccCC
Q 005684 610 TFYNLTHPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKYDHPYLRNCNLN 682 (683)
Q Consensus 610 ~F~g~i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~d~pfl~~Cni~ 682 (683)
+|+|++++||.+||+.++||++.++...+++|+||||+|++|||.+.++++|+++|++|++++++|||+||||
T Consensus 462 aF~g~~~~LD~rWNv~gLG~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~yr~~W~kYl~~s~~fl~~Cni~ 534 (534)
T PLN02742 462 TFYGLTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHPYLQQCNFH 534 (534)
T ss_pred HHcCcceecChhheecccccccccchhhccCCeEEEECCCCCcccccCCcccchHHHHHHccCCHHHHhCCCC
Confidence 9999999999999999999988777778999999999999999999999999999999999999999999997
No 5
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-123 Score=1032.48 Aligned_cols=441 Identities=51% Similarity=0.966 Sum_probs=423.7
Q ss_pred CCChhhHHHHhhhHHHHHHhhhhccccCCCchHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHHhhcccc
Q 005684 218 NDNSDSTVRLMRDQMIMARVYLSIAKMKNKPDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLY 297 (683)
Q Consensus 218 ~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~l~~~~~~~~~~m~~~~~~ak~~~~ 297 (683)
..|+|++||+|||||||||||++|||++||++|+|||++||||+||+||+|+.|+|||+++.++|++|+++|++||+++|
T Consensus 160 ~~~~d~~v~~~~dql~~ak~y~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~lp~~~~~~~~~m~~~~~~a~~~~~ 239 (603)
T PLN02718 160 RRATDEKVKEIRDKIIQAKAYLNLAPPGSNSQLVKELRLRTKELERAVGDATKDKDLSKSALQRMKSMEVTLYKASRVFP 239 (603)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHHHHHhccc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhcccCCCCcccchhhhhhhhhcCCcccCCCCCCCCCCCCCceeEEEe
Q 005684 298 DCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEKRKFPGSENLENPNLYHYALF 377 (683)
Q Consensus 298 d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~~laa~~~Pk~lhCL~~rLt~e~~~~~~~~~~~~~~~~l~dp~~~HIai~ 377 (683)
||++|++||||||+++||+++++++|++|++||||+|+|||||||+||||.|||.++++++++|++++|+||+++|||+|
T Consensus 240 d~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~PK~lhCL~~rLt~ey~~~~~~~~~~~~~~~l~d~~~~Hia~~ 319 (603)
T PLN02718 240 NCPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTTPKGLHCLSMRLTAEYFALDPEKRQLPNQQRYNDPDLYHYVVF 319 (603)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHhhCChhhccCCChhhccCCcceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhhhhcccccE
Q 005684 378 SDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLRQLESASMK 457 (683)
Q Consensus 378 sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLkqles~~~~ 457 (683)
+|||+++||+|+|++.|+++|++++||||||++++++|++||.+++..+++|+|+++++|.|++.+|+++++++++
T Consensus 320 sDNvlaasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s---- 395 (603)
T PLN02718 320 SDNVLACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNS---- 395 (603)
T ss_pred cCCceeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998876543
Q ss_pred EEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccC
Q 005684 458 EYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCG 537 (683)
Q Consensus 458 ~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~ 537 (683)
.+++|+|+++|+||+||++||+++||||||+|+||++||++||++||+|+++|||+||.
T Consensus 396 ---------------------~~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~ 454 (603)
T PLN02718 396 ---------------------HDPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCL 454 (603)
T ss_pred ---------------------cccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEecccc
Confidence 23688999999999999999999999999999999999999999999999999999997
Q ss_pred c---cccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhhhhhccc
Q 005684 538 E---SFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGLITFYNL 614 (683)
Q Consensus 538 ~---~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~nl~F~g~ 614 (683)
. .++++..+++|++|++.++|+++.||||+|||||||++||++++++++++|++.+.++.+|++|+||++|++|+|+
T Consensus 455 ~~~~~~~~~~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gr 534 (603)
T PLN02718 455 EGEPSFRSMDTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQ 534 (603)
T ss_pred ccccchhhhhhhhhccchhhhcccCCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCc
Confidence 5 3556677899999998889999999999999999999999999999999999988777899999999999999999
Q ss_pred eeecccccccccCCCCCCcccccCCCceEEEccCCCCCcccccccccHHHHHHHHhCCCCccccccCCC
Q 005684 615 THPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKYDHPYLRNCNLNE 683 (683)
Q Consensus 615 i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~d~pfl~~Cni~~ 683 (683)
+++||++||++++||++.+..+.+++|+||||+|++|||++.+++.|+++|.+|++++++|||+|||+|
T Consensus 535 i~~LD~rWNv~gLG~~~~i~~~~i~~aaIIHYnG~~KPWle~~i~~yr~~W~k~v~~~~~~l~~Cn~~~ 603 (603)
T PLN02718 535 TVALDKRWHVLGLGHESGVGASDIEQAAVIHYDGVMKPWLDIGIGKYKRYWNIHVPYHHPYLQQCNIHE 603 (603)
T ss_pred eeecChHHhccCccccccccccccCCCEEEEECCCCCccccCChhhHHHHHHhhcCCCChHHHhcCCCC
Confidence 999999999999999877766778999999999999999999999999999999999999999999997
No 6
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=3.4e-112 Score=929.74 Aligned_cols=426 Identities=43% Similarity=0.832 Sum_probs=388.5
Q ss_pred hHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhHHHHHHHHHhhhhhh
Q 005684 249 DLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLS 328 (683)
Q Consensus 249 ~~~~el~~~i~e~~~~l~~~~~d~~l~~~~~~~~~~m~~~~~~ak~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~ 328 (683)
++.+||.+-+.| -.-+|++.|++||+++.+.|+ +||+.+|||+++++|||||++++||+++++++|++|++
T Consensus 90 ~~~~~~~~~l~~--~~~~~~~~d~~lp~s~~~~~~-------~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~ 160 (533)
T PLN02870 90 RLVRDFYKILNE--VNTEEIPDGLKLPDSFSQLVS-------DMKNNHYDAKTFAFVLRAMMEKFERELRESKFAELMNK 160 (533)
T ss_pred hhHHHHHHHHHH--hccccccccccCChhHHHHHH-------HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555544444 344689999999999877776 67889999999999999999999999999999999999
Q ss_pred hhhcccCCCCcccchhhhhhhhhcCCcccCCCCCCC---CCCCCCceeEEEecCCccchhhHHHHHHHhcCCCCceEEEE
Q 005684 329 QLAAKTIPNGIHCMSMRLTIEYYLLPPEKRKFPGSE---NLENPNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHL 405 (683)
Q Consensus 329 ~laa~~~Pk~lhCL~~rLt~e~~~~~~~~~~~~~~~---~l~dp~~~HIai~sDNyLaasVvInSil~Nsk~p~~ivFHI 405 (683)
||||+|+|||||||+||||+|||+++++++++|+++ +|+||+++|||+||||+||+||||||++.|+++|+++||||
T Consensus 161 ~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~dp~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VFHv 240 (533)
T PLN02870 161 HFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSLKPEKIVFHV 240 (533)
T ss_pred HHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccCCcceeEEEEecceeEEEeeeehhhhcccCccceEEEE
Confidence 999999999999999999999999999999998876 89999999999999999999999999999999999999999
Q ss_pred EecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhhhhcccccEE-EEecCCCCCccccC------cccccc
Q 005684 406 VTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLRQLESASMKE-YYFKADHPTTLSSG------ASNLKY 478 (683)
Q Consensus 406 VTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLkqles~~~~~-y~F~~~~~~~L~~~------~~~l~~ 478 (683)
|||++|+.+|++||++||+++|+|||+|+|+|+||+++|+|+|+|+|+..+.. |||....+.....+ ..++++
T Consensus 241 vTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (533)
T PLN02870 241 ITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQA 320 (533)
T ss_pred ecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhccccc
Confidence 99999999999999999999999999999999999999999999999999754 55544333211111 246889
Q ss_pred CCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccCcc-----ccccccccCcCCcc
Q 005684 479 RNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCGES-----FHRFDKYLNFTNPH 553 (683)
Q Consensus 479 ~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~~~-----f~ry~~yLnfs~P~ 553 (683)
++|+|+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||+||... ++++..|+||++|.
T Consensus 321 ~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~ 400 (533)
T PLN02870 321 RSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPL 400 (533)
T ss_pred CCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccch
Confidence 9999999999999999999999999999999999999999999999999999999999542 35777899999999
Q ss_pred cccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcC--CCccccCCCcchhhhhhccceeecccccccccCCCCC
Q 005684 554 IARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNE--DRTLWKLGTLPPGLITFYNLTHPLEKSWHVLGLGYNP 631 (683)
Q Consensus 554 i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~--d~~l~~~gdLp~~nl~F~g~i~~Ld~~WN~l~lgy~~ 631 (683)
+..+|+++.||||||||||||++||++++++++++|++.+. +..+|++|+||++|++|+|++++||++||++++||+.
T Consensus 401 i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~ 480 (533)
T PLN02870 401 IAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQS 480 (533)
T ss_pred hhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCCcc
Confidence 99999999999999999999999999999999999998764 3478999999999999999999999999999999987
Q ss_pred CcccccCCCceEEEccCCCCCcccccccccHHHHHHHHhCCCCccccccCCC
Q 005684 632 SVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKYDHPYLRNCNLNE 683 (683)
Q Consensus 632 ~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~d~pfl~~Cni~~ 683 (683)
....+.+++|+||||+|++|||++.+.++|+.+|.+|++++++||++|||+|
T Consensus 481 ~~~~~~i~~aaIIHY~G~~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~~ 532 (533)
T PLN02870 481 KTNIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIRNCHILE 532 (533)
T ss_pred cccccccCCcEEEEECCCCCCccccCccchhHHHHHHHccCchHhhhcCCCC
Confidence 6666778999999999999999999999999999999999999999999986
No 7
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=2.4e-110 Score=918.20 Aligned_cols=419 Identities=37% Similarity=0.720 Sum_probs=388.6
Q ss_pred HHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhcccCC
Q 005684 257 RLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIP 336 (683)
Q Consensus 257 ~i~e~~~~l~~~~~d~~l~~~~~~~~~~m~~~~~~ak~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~~laa~~~P 336 (683)
-.+|++|+|+||+.|.++|+.+.++.+.|+++++++|+.+|||+++++|||||++.+||+++++++|++|++||||+|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~am~~~~e~~~~~~~~~~~~~~~laa~t~P 173 (535)
T PLN02867 94 LREELTRALVEAKEQDDGGRGTKGSTESFNDLVKEMTSNRQDIKAFAFRTKAMLLKMERKVQSARQRESIYWHLASHGIP 173 (535)
T ss_pred HHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhhhhhhhcCCcccCCCCCCC---CCCCCCceeEEEecCCccchhhHHHHHHHhcCCCCceEEEEEecCCChh
Q 005684 337 NGIHCMSMRLTIEYYLLPPEKRKFPGSE---NLENPNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFG 413 (683)
Q Consensus 337 k~lhCL~~rLt~e~~~~~~~~~~~~~~~---~l~dp~~~HIai~sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~ 413 (683)
||||||+||||+|||+++++++++|+++ +++||+++|||+||||+||+||||||++.|+++|+++|||||||++|+.
T Consensus 174 K~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~ 253 (535)
T PLN02867 174 KSLHCLCLKLAEEYAVNAMARSRLPPPESVSRLTDPSFHHVVLLTDNVLAASVVISSTVQNAANPEKLVFHIVTDKKTYT 253 (535)
T ss_pred CCccccchhhHHHHHhCchhhccCCChhhhhhccCCCcceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccH
Confidence 9999999999999999999999998777 8999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCCceEEEeeccchhhcccccchhhhhhcccccEE-E----------EecCCCCCccccCccccccCCCC
Q 005684 414 AMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLRQLESASMKE-Y----------YFKADHPTTLSSGASNLKYRNPK 482 (683)
Q Consensus 414 amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLkqles~~~~~-y----------~F~~~~~~~L~~~~~~l~~~n~~ 482 (683)
+|++||++||+++|+|||+|+|+|+|++.+|+|+++++|+.++.. + +|..+ ...++++++|+
T Consensus 254 aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~pk 326 (535)
T PLN02867 254 PMHAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGT-------HKRSLEALSPS 326 (535)
T ss_pred HHHHHHhhCCCccceEEEEeehhccccccccccHHHHHHHhhhhhhhhhccccccccccccc-------cccchhhcChh
Confidence 999999999999999999999999999999999999999877542 1 22221 12457889999
Q ss_pred CcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccC--cc---ccccccccCcCCcccccC
Q 005684 483 YLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCG--ES---FHRFDKYLNFTNPHIARS 557 (683)
Q Consensus 483 y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~--~~---f~ry~~yLnfs~P~i~~~ 557 (683)
|+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||.|.. .. .+++..|+||++|.+..+
T Consensus 327 ylS~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~ 406 (535)
T PLN02867 327 CLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSN 406 (535)
T ss_pred hhhHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhcc
Confidence 9999999999999999999999999999999999999999999999999998742 21 245778999999998889
Q ss_pred CCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCC--CccccCCCcchhhhhhccceeecccccccccCCCCCCc-c
Q 005684 558 FDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNED--RTLWKLGTLPPGLITFYNLTHPLEKSWHVLGLGYNPSV-D 634 (683)
Q Consensus 558 f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d--~~l~~~gdLp~~nl~F~g~i~~Ld~~WN~l~lgy~~~i-~ 634 (683)
|+++.||||||||||||++||++++++++++|++.+.+ ..+|++|+||+++++|+|++++||++||+.++||+... .
T Consensus 407 ~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~~~ 486 (535)
T PLN02867 407 LDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPPEVP 486 (535)
T ss_pred CCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccCCCcccccch
Confidence 99999999999999999999999999999999998754 46899999999999999999999999999999887542 2
Q ss_pred cccCCCceEEEccCCCCCcccccccccHHHHHHHHhCCCCccccccCC
Q 005684 635 RSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKYDHPYLRNCNLN 682 (683)
Q Consensus 635 ~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~d~pfl~~Cni~ 682 (683)
.+.+++|+||||+|++|||++.+.++|+++|.+|++++++|+|+|||+
T Consensus 487 ~~~i~~paIIHYnG~~KPW~e~~~~~yR~~W~kyl~~~~~fl~~cni~ 534 (535)
T PLN02867 487 REILESAAVLHFSGPAKPWLEIGFPEVRSLWYRHVNFSDKFIRKCRIM 534 (535)
T ss_pred hhhcCCcEEEEECCCCCcccccCCCchhHHHHHhcCccchHHHhcccC
Confidence 345789999999999999999999999999999999999999999996
No 8
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=3e-110 Score=914.56 Aligned_cols=410 Identities=40% Similarity=0.805 Sum_probs=378.5
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhcccCCCCcccchhhh
Q 005684 267 DTAADADLHHSVPEKIKLMGQVLSKAREQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRL 346 (683)
Q Consensus 267 ~~~~d~~l~~~~~~~~~~m~~~~~~ak~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~~laa~~~Pk~lhCL~~rL 346 (683)
|.+.|.++|.+ +++++.++|..+|||.+|++||||||+++||+++++++|+.++.||||+|+|||||||+|||
T Consensus 107 e~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~klr~~l~~~E~~~~~~k~~~~~~~~laa~t~PK~lHCL~mrL 179 (534)
T PLN02659 107 ELKGRSDIPQT-------LEEFMDEVKNSRSDARAFALKLREMVTLLEQRTRTAKIQEYLYRHVASSSIPKQLHCLALRL 179 (534)
T ss_pred ccCCccccchH-------HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhh
Confidence 55566678876 67777788889999999999999999999999999999998888999999999999999999
Q ss_pred hhhhhcCCcccCCCCCCC---CCCCCCceeEEEecCCccchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCC
Q 005684 347 TIEYYLLPPEKRKFPGSE---NLENPNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNP 423 (683)
Q Consensus 347 t~e~~~~~~~~~~~~~~~---~l~dp~~~HIai~sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~ 423 (683)
|+|||++++.++++|+++ +|+||+++|||+||||+||+||||||++.|+++|+++|||||||++|+.+|++||++||
T Consensus 180 t~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvLAasVVvnStv~~a~~p~~~VFHivTD~~ny~aM~~WF~~n~ 259 (534)
T PLN02659 180 ANEHSTNAAARLQLPLAELVPALVDNSYFHFVLASDNILAASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSLHP 259 (534)
T ss_pred HHHHHhCchhhhccCCcccccccCCCCcceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCC
Confidence 999999999999998777 79999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEeeccchhhcccccchhhhhhcccccEEEEecCCCCCcccc-------CccccccCCCCCcchhhHHHHhhhc
Q 005684 424 PGKAAIHVENVDEFKWLNSSYCPVLRQLESASMKEYYFKADHPTTLSS-------GASNLKYRNPKYLSMLNHLRFYLPQ 496 (683)
Q Consensus 424 ~~~a~I~v~nve~f~wl~~~y~pvLkqles~~~~~y~F~~~~~~~L~~-------~~~~l~~~n~~y~S~~~y~Rf~IPe 496 (683)
+++|+|||+|+|+|+||+++|+|||+||++.....++|..++...+.+ ...++++++|+|+|+++|+||+||+
T Consensus 260 ~~~a~v~V~~~e~f~wl~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPe 339 (534)
T PLN02659 260 LSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPE 339 (534)
T ss_pred CccceEEEEeehhcccccccccHHHHHHhhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHH
Confidence 999999999999999999999999999999998888887554321111 1346788999999999999999999
Q ss_pred ccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccCcc--c---cccccccCcCCcccccCCCCCCcceeeccee
Q 005684 497 VYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCGES--F---HRFDKYLNFTNPHIARSFDPNACGWAYGMNM 571 (683)
Q Consensus 497 LLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~~~--f---~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmL 571 (683)
+||+++||||||+||||++||++||++||+|+++|||+||... + +++..+++|++|.+..+|+++.||||+||||
T Consensus 340 LLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn~~~cYfNsGVlL 419 (534)
T PLN02659 340 LFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFDPNECAWAYGMNI 419 (534)
T ss_pred HhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccCccccceecceeE
Confidence 9999999999999999999999999999999999999999632 2 5677889999999988999999999999999
Q ss_pred ccchHHHHhhHHHHHHHHHHHcC--CCccccCCCcchhhhhhccceeecccccccccCCCCCCcccccCCCceEEEccCC
Q 005684 572 FDLKEWKKKDITGIYHKWQNMNE--DRTLWKLGTLPPGLITFYNLTHPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGN 649 (683)
Q Consensus 572 iNL~kWRk~nit~k~~~~l~~~~--d~~l~~~gdLp~~nl~F~g~i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~ 649 (683)
|||++||++++++++++|++.+. +..+|++|+||++|++|+|++++||.+||++++||+.....+.+++|+||||+|+
T Consensus 420 INLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~~~~~i~~paIIHYnG~ 499 (534)
T PLN02659 420 FDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSLADAESAGVVHFNGR 499 (534)
T ss_pred eeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCcccccccccccCCcEEEEECCC
Confidence 99999999999999999998763 4568999999999999999999999999999999987665667899999999999
Q ss_pred CCCcccccccccHHHHHHHHhCCCCccccccCCC
Q 005684 650 MKPWLELAMTKYRSYWTKYIKYDHPYLRNCNLNE 683 (683)
Q Consensus 650 ~KPW~~~~~~~y~~lW~kY~~~d~pfl~~Cni~~ 683 (683)
+|||+++++++|+++|.+|++++++|||+|||+|
T Consensus 500 ~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~~ 533 (534)
T PLN02659 500 AKPWLDIAFPQLRPLWAKYIDSSDKFIKSCHIRA 533 (534)
T ss_pred CCccccccCCcchhHHHHHhccCCHHHHhcCCCC
Confidence 9999999999999999999999999999999986
No 9
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=9.3e-109 Score=905.00 Aligned_cols=459 Identities=51% Similarity=0.946 Sum_probs=411.4
Q ss_pred hhHHHHhhhHHHHHHhhhhcccc---C--CCchHHHHHHHHHHHHHH-----H-hccc--cC--C--CCCCCCHHHHHHH
Q 005684 222 DSTVRLMRDQMIMARVYLSIAKM---K--NKPDLQQELQSRLKESQR-----A-LGDT--AA--D--ADLHHSVPEKIKL 284 (683)
Q Consensus 222 d~~~~~~~dq~~~a~~y~~~a~~---~--~~~~~~~el~~~i~e~~~-----~-l~~~--~~--d--~~l~~~~~~~~~~ 284 (683)
|.+.|+-.|-..++-||.+.|.- . .+.++--||..+.-++.. . +++. +. | .+||+++.++||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 160 (559)
T PLN02523 81 DQIRKQADDHRTLVNAYAAYARKLKLDNSKLLRLFADLSRNFTDLISKPSYRALLSSDGSAIDEDVLRQFEKEVKERVKV 160 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhHHHHhhcCccccccccccCCcCchHHHhhcchhHHHHHHH
Confidence 35667777888888888776632 1 122333444444443321 1 1111 12 2 2589999999999
Q ss_pred HHHHHHHhhccccchHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhcccCCCCcccchhhhhhhhhcCCcccC--CCCC
Q 005684 285 MGQVLSKAREQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEKR--KFPG 362 (683)
Q Consensus 285 m~~~~~~ak~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f~~~laa~~~Pk~lhCL~~rLt~e~~~~~~~~~--~~~~ 362 (683)
|+++|++||+ .|||.++++|||+|++++|||++++++|++|++||||+|+|||||||+||||+|||++++.++ +.|+
T Consensus 161 ~~~~~~~a~~-~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~ 239 (559)
T PLN02523 161 ARQMIAESKE-SFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAMRLMEERIAHPEKYKDEGKPP 239 (559)
T ss_pred HHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHhHHHHHhChHhhhccCCCc
Confidence 9999999996 999999999999999999999999999999999999999999999999999999999998754 3566
Q ss_pred CCCCCCCCceeEEEecCCccchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhccc
Q 005684 363 SENLENPNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNS 442 (683)
Q Consensus 363 ~~~l~dp~~~HIai~sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~ 442 (683)
+++++||+++|||+||||+++++|+|+||+.|+++|+++|||||||++|+++|++||.+|++++++|+|+++|+|+|++.
T Consensus 240 ~~~l~dp~l~Hy~ifSdNvlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~ 319 (559)
T PLN02523 240 PPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNS 319 (559)
T ss_pred chhccCCCcceEEEecCcchhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhc
Q 005684 443 SYCPVLRQLESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWS 522 (683)
Q Consensus 443 ~y~pvLkqles~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~ 522 (683)
+|+|+++|+++.+++.|+|..+.... .....+++|++|+|+|+++|+||+||++||+++||||||+||||++||++||+
T Consensus 320 ~~~pvlk~l~s~~~~~~~f~~~~~~~-~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~ 398 (559)
T PLN02523 320 SYVPVLRQLESANLQKFYFENKLENA-TKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWK 398 (559)
T ss_pred ccchHHHhhhhhhhhhhhcccccccc-ccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHh
Confidence 99999999999999999998654332 13346789999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCC
Q 005684 523 VDLQGKVNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLG 602 (683)
Q Consensus 523 iDL~gkviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~g 602 (683)
+||+|+++|||+||...+++|..+++|++|.+...|+++.||||+|||||||++||+++++++++.|.+.+.+..+|++|
T Consensus 399 iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~Dqd 478 (559)
T PLN02523 399 IDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLG 478 (559)
T ss_pred CcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccccccccc
Confidence 99999999999999766788899999999998889999999999999999999999999999999898888788899999
Q ss_pred CcchhhhhhccceeecccccccccCCCCCCcccccCCCceEEEccCCCCCcccccccccHHHHHHHHhCCCCccccccCC
Q 005684 603 TLPPGLITFYNLTHPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKYDHPYLRNCNLN 682 (683)
Q Consensus 603 dLp~~nl~F~g~i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~d~pfl~~Cni~ 682 (683)
+||++|++|+|++++||++||++++||++.+..+.+++|+||||+|++|||++.+.++|+++|++|++++++|||+|||+
T Consensus 479 aLpp~LivF~gri~~LD~rWNvlglGy~~~i~~~~i~~paIIHYnG~~KPWle~~i~~yr~~W~kYl~~~~~fl~~Cn~~ 558 (559)
T PLN02523 479 TLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQFKPLWTKYVDYDMEFVQACNFG 558 (559)
T ss_pred ccchHHHHhcCceEecCchhhccCCccCCCccccccCCCEEEEECCCCCccccCCCCcchHHHHHHHccCCHHHHhCCCC
Confidence 99999999999999999999999999988877788899999999999999999999999999999999999999999997
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=3.3e-56 Score=459.35 Aligned_cols=255 Identities=55% Similarity=1.004 Sum_probs=232.5
Q ss_pred eeEEEecCCccchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhhhh
Q 005684 372 YHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLRQL 451 (683)
Q Consensus 372 ~HIai~sDNyLaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLkql 451 (683)
+|||+++|||+++||+|+|++.|+++|.+++|||+||+++.++|+.||..++..+++|+|.+++++.|....+.+.++|+
T Consensus 1 ~hiv~~~Dn~l~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 80 (257)
T cd06429 1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQL 80 (257)
T ss_pred CCEEEEecchhHHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhh
Confidence 69999999999999999999999999999999999999999999999999999999999999999998888788888888
Q ss_pred cccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEE
Q 005684 452 ESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNG 531 (683)
Q Consensus 452 es~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviG 531 (683)
++.. ....+++++++++|.++|+||+||++||+++||||||+|+||++||++||++||+|+++|
T Consensus 81 ~~~~----------------~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~a 144 (257)
T cd06429 81 ESEA----------------DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAG 144 (257)
T ss_pred hccc----------------cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEE
Confidence 7744 122456778999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCC--ccccCCCcchhhh
Q 005684 532 AVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDR--TLWKLGTLPPGLI 609 (683)
Q Consensus 532 AV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~--~l~~~gdLp~~nl 609 (683)
||+| |||||||||||++||++++++++++|++.+.+. .+|++++||++|+
T Consensus 145 av~d----------------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~ 196 (257)
T cd06429 145 AVET----------------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLI 196 (257)
T ss_pred EEhh----------------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHH
Confidence 9987 699999999999999999999999999876543 5688899999999
Q ss_pred hhccceeecccccccccCCCCCCcccccCCCceEEEccCCCCCcccccccccHHHHHHHHh
Q 005684 610 TFYNLTHPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIK 670 (683)
Q Consensus 610 ~F~g~i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~ 670 (683)
+|+|+++.||++||++++||+.......+.+|+||||+|+.|||+..+.++|+++||+|+.
T Consensus 197 ~~~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~w~~yl~ 257 (257)
T cd06429 197 VFYGLTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAIPSYKELWEKYLS 257 (257)
T ss_pred HccCeeEECChHHcccCCcccccccccccCCcEEEEECCCCCCcCCCCCChHHHHHHHHhC
Confidence 9999999999999999888875443455679999999999999999998999999999973
No 11
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=2.8e-42 Score=367.70 Aligned_cols=260 Identities=18% Similarity=0.262 Sum_probs=188.7
Q ss_pred CCceeEEEecC-Cc-cchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeecc--chhhccccc
Q 005684 369 PNLYHYALFSD-NV-LAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVD--EFKWLNSSY 444 (683)
Q Consensus 369 p~~~HIai~sD-Ny-LaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve--~f~wl~~~y 444 (683)
+..+|||+++| || .+++|+|.|+++|+++ ..++|||++++++.+..+.+-.+....+..|.+.-++ .|+
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~------ 95 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLK------ 95 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHh------
Confidence 46899999998 88 7899999999999865 5799999999999877665433322222333332221 111
Q ss_pred chhhhhhcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCC-CCeEEEEecCEEEeccchHHhcc
Q 005684 445 CPVLRQLESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPK-LNKILFLDDDIVVQKDLTRLWSV 523 (683)
Q Consensus 445 ~pvLkqles~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~-ldKVLYLDaDvIV~~DLseLw~i 523 (683)
.++...++|.++|+||+||++||+ ++||||||+|+||++||++||++
T Consensus 96 --------------------------------~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~ 143 (334)
T PRK15171 96 --------------------------------SLPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDL 143 (334)
T ss_pred --------------------------------CCcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhc
Confidence 112245789999999999999995 99999999999999999999999
Q ss_pred CCCCCeEEEe-eccCccc-cccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccC
Q 005684 524 DLQGKVNGAV-ETCGESF-HRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKL 601 (683)
Q Consensus 524 DL~gkviGAV-~Dc~~~f-~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~ 601 (683)
||+|..+||| .|+...+ ......++. | ++ ..+|||||||||||++||+.++++++++++....-......
T Consensus 144 dl~~~~~aav~~d~~~~~~~~~~~~l~~--~----~~--~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~ 215 (334)
T PRK15171 144 DFAENEIAAVVAEGDAEWWSKRAQSLQT--P----GL--ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITH 215 (334)
T ss_pred cCCCCeEEEEEeccchhHHHHHHHhcCC--c----cc--cccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceee
Confidence 9996656655 4543221 111112211 1 11 24699999999999999999999999999875421111223
Q ss_pred CCcchhhhhhccceeecccccccccC-CCCCC--cccccCCCceEEEccCCCCCcccccccccHHHHHHHHhCCCCcc
Q 005684 602 GTLPPGLITFYNLTHPLEKSWHVLGL-GYNPS--VDRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTKYIKYDHPYL 676 (683)
Q Consensus 602 gdLp~~nl~F~g~i~~Ld~~WN~l~l-gy~~~--i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~d~pfl 676 (683)
+||+++|++|.|+++.||.+||++.. .+... .......+|+||||+|+.|||+..+.++++++||+|... +||-
T Consensus 216 ~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~~~~~~~~f~~~~~~-spw~ 292 (334)
T PRK15171 216 LDQDVLNILLAGKVKFIDAKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWADYPVSQYFLKAKEA-SPWK 292 (334)
T ss_pred cChhHHHHHHcCCeEECCHhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCCCCCchHHHHHHHHhc-CCCC
Confidence 56667899999999999999998742 22110 011223589999999999999988888999999999954 3554
No 12
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=5.5e-40 Score=342.66 Aligned_cols=261 Identities=20% Similarity=0.277 Sum_probs=188.0
Q ss_pred EEEecCCc-cchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhhhhc
Q 005684 374 YALFSDNV-LAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLRQLE 452 (683)
Q Consensus 374 Iai~sDNy-LaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLkqle 452 (683)
||++.+|| .+++|+|.|+++|+. ..++|||++|+.+.+..+.+.......++.|.+.+++++. . .
T Consensus 5 iv~~~~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~---~-------~-- 70 (280)
T cd06431 5 IVCAGYNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELK---S-------R-- 70 (280)
T ss_pred EEEccCCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhh---h-------h--
Confidence 45555888 788999999999984 4599999999999888777765544557778777765321 0 0
Q ss_pred ccccEEEEecCCCCCccccCccccccCCCCCcc-hhhHHHHhhhcccC-CCCeEEEEecCEEEeccchHHhcc--CCCC-
Q 005684 453 SASMKEYYFKADHPTTLSSGASNLKYRNPKYLS-MLNHLRFYLPQVYP-KLNKILFLDDDIVVQKDLTRLWSV--DLQG- 527 (683)
Q Consensus 453 s~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S-~~~y~Rf~IPeLLP-~ldKVLYLDaDvIV~~DLseLw~i--DL~g- 527 (683)
+. ..++. ++| ..+|+||+||++|| +++||||||+|+||++||++||++ |+.|
T Consensus 71 --------~~--------------~~~~~-~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~ 127 (280)
T cd06431 71 --------VS--------------WIPNK-HYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQ 127 (280)
T ss_pred --------hc--------------cCccc-chhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCC
Confidence 00 01112 344 44889999999999 599999999999999999999998 7865
Q ss_pred CeEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCC-CccccCCCcch
Q 005684 528 KVNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNED-RTLWKLGTLPP 606 (683)
Q Consensus 528 kviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d-~~l~~~gdLp~ 606 (683)
+++|||+|.... |...+. . ....+.....|||||||||||++||+.++++++..+.+.+.. ..-...+||+.
T Consensus 128 ~~~a~v~~~~~~---~~~~~~-~---~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDi 200 (280)
T cd06431 128 QVLGLVENQSDW---YLGNLW-K---NHRPWPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDI 200 (280)
T ss_pred cEEEEeccchhh---hhhhhh-h---ccCCCcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHH
Confidence 577777765321 111100 0 000111123599999999999999999999987765544311 11123467778
Q ss_pred hhhhhccc---eeecccccccccCCCC-CCcccccCCCceEEEccCCCCCcccccc-cccHHHHHHHHhCCCCcccc
Q 005684 607 GLITFYNL---THPLEKSWHVLGLGYN-PSVDRSEIENAAVVHYNGNMKPWLELAM-TKYRSYWTKYIKYDHPYLRN 678 (683)
Q Consensus 607 ~nl~F~g~---i~~Ld~~WN~l~lgy~-~~i~~~~i~na~IIHY~G~~KPW~~~~~-~~y~~lW~kY~~~d~pfl~~ 678 (683)
+|++|.++ ++.||++||++..... ......+..+|+||||+|+.|||...+. ++|+++|.+|.+++.+-||+
T Consensus 201 LN~v~~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~l~~ 277 (280)
T cd06431 201 FNAVIKQNPFLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRR 277 (280)
T ss_pred HHHHHcCCcceeEECCCccccccCccchHhHhhcCcCCCEEEEeCCCCCCCCcCCCChHHHHHHHHHHhcCchhhhh
Confidence 89999999 8999999999853111 1111123578999999999999998775 89999999999999888775
No 13
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=2e-38 Score=322.22 Aligned_cols=237 Identities=21% Similarity=0.276 Sum_probs=175.7
Q ss_pred eeEEE-ecC-Cc-cchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhh
Q 005684 372 YHYAL-FSD-NV-LAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVL 448 (683)
Q Consensus 372 ~HIai-~sD-Ny-LaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvL 448 (683)
+||++ ++| || .+++|+|.|+++|+++ .++|||++++++.+..+.+..+....+..+++..++.-.+.
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~-------- 70 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSV-------- 70 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcc--------
Confidence 57777 456 78 7889999999999975 69999999999987766554443333555665554311000
Q ss_pred hhhcccccEEEEecCCCCCccccCccccccCC-CCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCC
Q 005684 449 RQLESASMKEYYFKADHPTTLSSGASNLKYRN-PKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQG 527 (683)
Q Consensus 449 kqles~~~~~y~F~~~~~~~L~~~~~~l~~~n-~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~g 527 (683)
.+.. .++++..+|+||+||++||+++||||||+|+||++||++||+++++|
T Consensus 71 ----------------------------~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~ 122 (246)
T cd00505 71 ----------------------------DSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGG 122 (246)
T ss_pred ----------------------------hhhhhcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCC
Confidence 0011 25788999999999999999999999999999999999999999999
Q ss_pred CeEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchh
Q 005684 528 KVNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPG 607 (683)
Q Consensus 528 kviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~ 607 (683)
+++|||+||..... ..+... ..++..+.+|||||||||||++||++++.+++.++...+.... ..+||+.+
T Consensus 123 ~~~aav~d~~~~~~--~~~~~~-----~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~--~~~DQd~L 193 (246)
T cd00505 123 QELAAAPDPGDRRE--GKYYRQ-----KRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSL--SGGDQDLL 193 (246)
T ss_pred CeEEEccCchhhhc--cchhhc-----ccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccC--ccCCcHHH
Confidence 99999999964211 000000 1123345689999999999999998888887777654443322 33556677
Q ss_pred hhhhccc---eeecccccccccCCCCCCc--ccccCCCceEEEccCCCCCccc
Q 005684 608 LITFYNL---THPLEKSWHVLGLGYNPSV--DRSEIENAAVVHYNGNMKPWLE 655 (683)
Q Consensus 608 nl~F~g~---i~~Ld~~WN~l~lgy~~~i--~~~~i~na~IIHY~G~~KPW~~ 655 (683)
|.+|.++ ++.||.+||++..++.... ..+..++++||||+|+.|||..
T Consensus 194 N~~~~~~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 194 NTFFKQVPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred HHHHhcCCCeEEECCCeeeEEecCccccccchhhhcCCCEEEEeCCCCCCCCC
Confidence 8999998 9999999999976543221 1235679999999999999963
No 14
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=8.9e-38 Score=316.46 Aligned_cols=237 Identities=19% Similarity=0.243 Sum_probs=180.6
Q ss_pred eeEEEecC-Cc-cchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhh
Q 005684 372 YHYALFSD-NV-LAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLR 449 (683)
Q Consensus 372 ~HIai~sD-Ny-LaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLk 449 (683)
+|||+++| +| .+++|++.|+++|+++ ..++|||++++++...++.+.......+..|.+..++.-. +
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~---------~- 69 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDD---------F- 69 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHH---------H-
Confidence 58999988 78 6789999999999976 5799999999988776654433322234455554443100 0
Q ss_pred hhcccccEEEEecCCCCCccccCccccccC-CCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCC
Q 005684 450 QLESASMKEYYFKADHPTTLSSGASNLKYR-NPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGK 528 (683)
Q Consensus 450 qles~~~~~y~F~~~~~~~L~~~~~~l~~~-n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gk 528 (683)
. .+. ..++++.++|+||++|+++|+++||||||+|+||++||++||++|++|+
T Consensus 70 ------------~--------------~~~~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~ 123 (248)
T cd04194 70 ------------K--------------FFPATTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDN 123 (248)
T ss_pred ------------h--------------cCCcccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCC
Confidence 0 000 2456889999999999999999999999999999999999999999999
Q ss_pred eEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhh
Q 005684 529 VNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGL 608 (683)
Q Consensus 529 viGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~n 608 (683)
++|||+||......... ...+.....+||||||||+|+++||+.+++++++++++.+... +..++|+.+|
T Consensus 124 ~~aa~~d~~~~~~~~~~--------~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~--~~~~DQd~LN 193 (248)
T cd04194 124 LLAAVRDPFIEQEKKRK--------RRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGR--LIYPDQDILN 193 (248)
T ss_pred EEEEEecccHHHHHHHH--------hhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCc--eeeCChHHHH
Confidence 99999999753221111 0112334678999999999999999999999999999877542 2345666789
Q ss_pred hhhccceeecccccccccCCCCCCc--------ccccCCCceEEEccCCCCCccc
Q 005684 609 ITFYNLTHPLEKSWHVLGLGYNPSV--------DRSEIENAAVVHYNGNMKPWLE 655 (683)
Q Consensus 609 l~F~g~i~~Ld~~WN~l~lgy~~~i--------~~~~i~na~IIHY~G~~KPW~~ 655 (683)
.+|.++++.||.+||++...+.... .....++++||||+|+.|||..
T Consensus 194 ~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~ 248 (248)
T cd04194 194 AVLKDKILYLPPRYNFQTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWNK 248 (248)
T ss_pred HHHhCCeEEcCcccccchhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCCC
Confidence 9999999999999999875443211 1134679999999999999963
No 15
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=9e-37 Score=323.75 Aligned_cols=257 Identities=19% Similarity=0.268 Sum_probs=193.8
Q ss_pred ceeEEEecC-Cc-cchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcC-CC-CCceEEEeeccchhhcccccch
Q 005684 371 LYHYALFSD-NV-LAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLN-PP-GKAAIHVENVDEFKWLNSSYCP 446 (683)
Q Consensus 371 ~~HIai~sD-Ny-LaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n-~~-~~a~I~v~nve~f~wl~~~y~p 446 (683)
.++||++.| || .++||+|.|++.|++. -.+.|||++|+++.+.++..-... +. ..+.+.+++++.|+
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~-------- 72 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFL-------- 72 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhh--------
Confidence 468999999 78 8999999999999975 479999999999998877655442 22 24444444444331
Q ss_pred hhhhhcccccEEEEecCCCCCccccCccccccC-CCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCC
Q 005684 447 VLRQLESASMKEYYFKADHPTTLSSGASNLKYR-NPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDL 525 (683)
Q Consensus 447 vLkqles~~~~~y~F~~~~~~~L~~~~~~l~~~-n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL 525 (683)
.++ .++++|.++|+||+||++||+++|+||||+||||+|||++||.+++
T Consensus 73 ------------------------------~~~~~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~ 122 (325)
T COG1442 73 ------------------------------DYPPFTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDL 122 (325)
T ss_pred ------------------------------cccccccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCC
Confidence 111 3467899999999999999999999999999999999999999999
Q ss_pred CCCeEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcc
Q 005684 526 QGKVNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLP 605 (683)
Q Consensus 526 ~gkviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp 605 (683)
+++++|||.|+......-. +. ..........|||||||++|++.||+++++++++++++...+.. ..++|+
T Consensus 123 ~~~~~aaV~D~~~~~~~~~--~~-----~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~--~~~DQd 193 (325)
T COG1442 123 EEYYLAAVRDVFSHYMKEG--AL-----RLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDL--LYPDQD 193 (325)
T ss_pred CcceEEEEeehhhhhhhhh--hh-----HhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhcccccc--CCcccc
Confidence 9999999999864211000 00 00011234679999999999999999999999999986655333 345577
Q ss_pred hhhhhhccceeecccccccccCC-CCCC--cccccCCCceEEEccCCCCCccccccccc-HHHHHHHHhCCCCcc
Q 005684 606 PGLITFYNLTHPLEKSWHVLGLG-YNPS--VDRSEIENAAVVHYNGNMKPWLELAMTKY-RSYWTKYIKYDHPYL 676 (683)
Q Consensus 606 ~~nl~F~g~i~~Ld~~WN~l~lg-y~~~--i~~~~i~na~IIHY~G~~KPW~~~~~~~y-~~lW~kY~~~d~pfl 676 (683)
.+|++|++++.+||.+||+++.. +... .......+|.|+||+|+.|||+..+.+.+ ..+|...+ ..+||.
T Consensus 194 iLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~~~~w~~i~-~~~p~~ 267 (325)
T COG1442 194 ILNMIFEDRVLELPIRYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDSSNYPRSHEWHEIL-AETPWK 267 (325)
T ss_pred HHHHHHHhhhhccCcccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCccccccHHHHHHHHH-hcCCcc
Confidence 88999999999999999999632 1111 11233468999999999999999986655 46666665 344554
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=3e-35 Score=291.21 Aligned_cols=245 Identities=26% Similarity=0.378 Sum_probs=164.6
Q ss_pred eEEEecC-Cc-cchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhhh
Q 005684 373 HYALFSD-NV-LAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLRQ 450 (683)
Q Consensus 373 HIai~sD-Ny-LaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLkq 450 (683)
||++++| || .+++|+|+|+++|++++..++|||++++.+.+..+..............+...+ ..+ +..
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~--------~~~ 71 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPD-ISM--------LEE 71 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETS-GGH--------HH-
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccch-HHh--------hhh
Confidence 7899888 78 788999999999999878899999999999877765443332111111000000 000 000
Q ss_pred hcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeE
Q 005684 451 LESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVN 530 (683)
Q Consensus 451 les~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkvi 530 (683)
+ ........+++..+|+||++|++||+++||||||+||||.+||++||+++++|+.+
T Consensus 72 --------~---------------~~~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~ 128 (250)
T PF01501_consen 72 --------F---------------QFNSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYL 128 (250)
T ss_dssp ------------------------TTS-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSE
T ss_pred --------h---------------hhcccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhc
Confidence 0 00112356789999999999999999999999999999999999999999999999
Q ss_pred EEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhhhh
Q 005684 531 GAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGLIT 610 (683)
Q Consensus 531 GAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~nl~ 610 (683)
||+.|+.... ......+..........+||||||||+|+++||+.++.+++..+++.+.. ....++|+.+|++
T Consensus 129 ~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~ 201 (250)
T PF01501_consen 129 AAVEDESFDN-----FPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIV 201 (250)
T ss_dssp EEEE----HH-----HHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHH
T ss_pred cccccchhhh-----hhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhh
Confidence 9999932110 00000111111223458999999999999999999999999999877654 2345667778999
Q ss_pred hccceeecccccccccCCCCC--CcccccCCCceEEEccCCCCCcccc
Q 005684 611 FYNLTHPLEKSWHVLGLGYNP--SVDRSEIENAAVVHYNGNMKPWLEL 656 (683)
Q Consensus 611 F~g~i~~Ld~~WN~l~lgy~~--~i~~~~i~na~IIHY~G~~KPW~~~ 656 (683)
|.+.++.||.+||++..++.. .......++++||||+|..|||...
T Consensus 202 ~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 202 FYGNIKPLPCRYNCQPSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HTTGEEEEEGGGSEEHHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred ccceeEEECchhccccccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 999999999999999754410 0112345789999999999999875
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.97 E-value=9.2e-31 Score=275.51 Aligned_cols=250 Identities=16% Similarity=0.289 Sum_probs=166.6
Q ss_pred eeEEEe-cCCc-cchhhHHHHHHHhcCCCCceEEEEEecCC-Chhhh---hhhhhcCCCCCceEEEeeccchhhcccccc
Q 005684 372 YHYALF-SDNV-LAASVVVNSTIMNAKDSSKHVFHLVTDKL-NFGAM---NMWFLLNPPGKAAIHVENVDEFKWLNSSYC 445 (683)
Q Consensus 372 ~HIai~-sDNy-LaasVvInSil~Nsk~p~~ivFHIVTD~l-n~~am---k~wFl~n~~~~a~I~v~nve~f~wl~~~y~ 445 (683)
+|+|++ +++. -.+-|+|.|++.|+. ..++|||++|.. ..... +.|-... ...+
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~---~~~i---------------- 59 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELI---DRKF---------------- 59 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhc---ccee----------------
Confidence 477774 4543 456799999999984 569999999984 33322 2221110 0011
Q ss_pred hhhhhhcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhcc--
Q 005684 446 PVLRQLESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSV-- 523 (683)
Q Consensus 446 pvLkqles~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~i-- 523 (683)
....|.. ..|. .... .+ +..+++.+|+||++|++||++|||||||+|+||.+||++||++
T Consensus 60 ---------~~~i~~I--~~P~---~~~~--~w--s~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~ 121 (304)
T cd06430 60 ---------NYTLHPI--TFPS---GNAA--EW--KKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLK 121 (304)
T ss_pred ---------eeEEEEE--ecCc---cchh--hh--hhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHh
Confidence 0001111 0111 0000 00 1346679999999999999999999999999999999999999
Q ss_pred CCCCC-eEEEeeccCc-cccccccccCcCCcccccCCCCCCcceeecceeccchHHHH-----------hhHHHHHHHHH
Q 005684 524 DLQGK-VNGAVETCGE-SFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKK-----------KDITGIYHKWQ 590 (683)
Q Consensus 524 DL~gk-viGAV~Dc~~-~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk-----------~nit~k~~~~l 590 (683)
|++|+ ++|++++... ....|.. + ....+ .+..|||||||+|||++||+ .++++++++++
T Consensus 122 df~~~~~aA~v~e~~~~~~~~~~~---~----~~~~~-~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~ 193 (304)
T cd06430 122 KFNSTQLAAMAPEHEEPNIGWYNR---F----ARHPY-YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLY 193 (304)
T ss_pred hcCCCeEEEEEecccccchhhhhh---h----cccCc-ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHH
Confidence 99986 5566665421 0111110 0 01111 12357999999999999999 78899999999
Q ss_pred HHcCCCccccCCCcchhhhhhccc---eeecccccccccC--CCCCCcccccCCCceEEEccCCCCCcccccccccHHHH
Q 005684 591 NMNEDRTLWKLGTLPPGLITFYNL---THPLEKSWHVLGL--GYNPSVDRSEIENAAVVHYNGNMKPWLELAMTKYRSYW 665 (683)
Q Consensus 591 ~~~~d~~l~~~gdLp~~nl~F~g~---i~~Ld~~WN~l~l--gy~~~i~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW 665 (683)
+.+.....| +||+.+|++|.++ ++.||++||++.. .|..+....+.+.++|||++++.| .....+.|+.++
T Consensus 194 ~~~~~~l~~--~DQDiLN~v~~~~p~~~~~Lp~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~~~--~~~~~~~f~~~~ 269 (304)
T cd06430 194 KKYKLKITW--GDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRGVY--HSDKQPAFRAVY 269 (304)
T ss_pred HhcccCCCC--CCHHHHHHHHcCCCCeEEEcCccccCCccceeecccccccccccceEEEcCCCCC--CCccchHHHHHH
Confidence 877654444 5666789999997 9999999998753 222222223457899999998766 445556789999
Q ss_pred HHHHhCC
Q 005684 666 TKYIKYD 672 (683)
Q Consensus 666 ~kY~~~d 672 (683)
....+|+
T Consensus 270 ~~~~~~~ 276 (304)
T cd06430 270 EAIREYT 276 (304)
T ss_pred HHHHhcc
Confidence 8888877
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.97 E-value=1.5e-30 Score=267.36 Aligned_cols=231 Identities=14% Similarity=0.155 Sum_probs=155.4
Q ss_pred eEEE-ecC-Cc-cchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhh
Q 005684 373 HYAL-FSD-NV-LAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLR 449 (683)
Q Consensus 373 HIai-~sD-Ny-LaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLk 449 (683)
||.. .+| +| .+++|++.|+++|+. ..++|||++++++.+..+..-.+....+..+++..++.-.|+.
T Consensus 2 ni~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~i~~~~~~~-------- 71 (248)
T cd06432 2 NIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTYKWPRWLH-------- 71 (248)
T ss_pred eEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEEecChhhhh--------
Confidence 4444 455 57 789999999999984 5699999999999776554433322234455554442101110
Q ss_pred hhcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCC-CCeEEEEecCEEEeccchHHhccCCCCC
Q 005684 450 QLESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPK-LNKILFLDDDIVVQKDLTRLWSVDLQGK 528 (683)
Q Consensus 450 qles~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~-ldKVLYLDaDvIV~~DLseLw~iDL~gk 528 (683)
.++...+ ..++|.|++++++||+ ++||||||+|+||.+||++||++||+|+
T Consensus 72 ---------------------------~~~~~~~-~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~ 123 (248)
T cd06432 72 ---------------------------KQTEKQR-IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGA 123 (248)
T ss_pred ---------------------------cccccch-hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCC
Confidence 0000111 3567999999999995 9999999999999999999999999999
Q ss_pred eEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHH---HcCCCccccCCCcc
Q 005684 529 VNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQN---MNEDRTLWKLGTLP 605 (683)
Q Consensus 529 viGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~---~~~d~~l~~~gdLp 605 (683)
++|||+||.... .......+.......++ .+..|||||||||||++||+.++++++.++++ .+..... ..||+
T Consensus 124 ~~Aav~d~~~~~-~~~~~~~~~~~~~~~~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~--~~DQD 199 (248)
T cd06432 124 PYGYTPFCDSRK-EMDGFRFWKQGYWKSHL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLA--NLDQD 199 (248)
T ss_pred eEEEeeccccch-hcccchhhhhhhhhhhc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccc--cCCch
Confidence 999999986421 00000000000001122 23569999999999999999999997776654 2222222 23344
Q ss_pred hhhhhhccc-eeecccccccccCCCCCCcccccCCCceEEEccCC
Q 005684 606 PGLITFYNL-THPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGN 649 (683)
Q Consensus 606 ~~nl~F~g~-i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~ 649 (683)
..|.++.+. +++||.+||.+.. +. ..+..+.|.+|||..+
T Consensus 200 iLN~v~~~~~i~~Lp~~w~~~~~-~~---~~~~~~~~~~~~~~~~ 240 (248)
T cd06432 200 LPNNMQHQVPIFSLPQEWLWCET-WC---SDESKKKAKTIDLCNN 240 (248)
T ss_pred hhHHHhccCCeEECChHHHHHHH-Hh---cccccCccceeecccC
Confidence 568999885 9999999999742 21 1233678999999864
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.92 E-value=1.3e-24 Score=221.48 Aligned_cols=214 Identities=16% Similarity=0.113 Sum_probs=146.5
Q ss_pred CCc-cchhhHHHHHHHhcCCCCceEEEE-EecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccccchhhhhhccccc
Q 005684 379 DNV-LAASVVVNSTIMNAKDSSKHVFHL-VTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSSYCPVLRQLESASM 456 (683)
Q Consensus 379 DNy-LaasVvInSil~Nsk~p~~ivFHI-VTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~y~pvLkqles~~~ 456 (683)
||| .+++|++.|+.+|+++ +.+|| ++++++...++.+.... +++..++.+++
T Consensus 10 ~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~~~~L~~~~------~~~~~v~~i~~----------------- 63 (240)
T cd02537 10 DDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEESREALEEVG------WIVREVEPIDP----------------- 63 (240)
T ss_pred hhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHHcC------CEEEecCccCC-----------------
Confidence 388 7889999999999864 33444 45567776655443322 22222321110
Q ss_pred EEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeecc
Q 005684 457 KEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETC 536 (683)
Q Consensus 457 ~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc 536 (683)
+. . . . .....++..+|.||+++++. +++||||||+|+||.+||++||++ +..++|+.|+
T Consensus 64 ---------~~----~-~--~-~~~~~~~~~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~ 122 (240)
T cd02537 64 ---------PD----S-A--N-LLKRPRFKDTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDC 122 (240)
T ss_pred ---------cc----h-h--h-hccchHHHHHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeeeccc
Confidence 00 0 0 0 00124567899999999975 699999999999999999999987 6778888775
Q ss_pred CccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhhhhhccc--
Q 005684 537 GESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGLITFYNL-- 614 (683)
Q Consensus 537 ~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~nl~F~g~-- 614 (683)
.. ..|||||||+||++. ++.+.+.+++..... +..++|+.+|.+|.++
T Consensus 123 ~~-----------------------~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~~---~~~~DQdiLN~~~~~~~~ 172 (240)
T cd02537 123 GW-----------------------PDLFNSGVFVLKPSE----ETFNDLLDALQDTPS---FDGGDQGLLNSYFSDRGI 172 (240)
T ss_pred Cc-----------------------cccccceEEEEcCCH----HHHHHHHHHHhccCC---CCCCCHHHHHHHHcCCCC
Confidence 31 258999999999964 455556666654433 3446777889999999
Q ss_pred eeecccccccccCCCCCCcc-cccCCCceEEEccCCCCCccccccc---------ccHHHHHHHH
Q 005684 615 THPLEKSWHVLGLGYNPSVD-RSEIENAAVVHYNGNMKPWLELAMT---------KYRSYWTKYI 669 (683)
Q Consensus 615 i~~Ld~~WN~l~lgy~~~i~-~~~i~na~IIHY~G~~KPW~~~~~~---------~y~~lW~kY~ 669 (683)
+..||.+||++...+..... ....++++||||+|+.|||...+.. .....||..+
T Consensus 173 ~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~ 237 (240)
T cd02537 173 WKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFIGGDKPWSWWRDPETKEKDDYNELHQWWWDIY 237 (240)
T ss_pred EeECCcceeeehhhhccCchhhcccCCcEEEEEeCCCCCCCCCcCCCcccccchHHHHHHHHHHH
Confidence 99999999998543321111 1234689999999999999877543 3467787765
No 20
>PLN00176 galactinol synthase
Probab=99.90 E-value=1.3e-22 Score=216.50 Aligned_cols=169 Identities=17% Similarity=0.263 Sum_probs=119.0
Q ss_pred hhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccCcccc--cccc-----------ccCcCCcc
Q 005684 487 LNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCGESFH--RFDK-----------YLNFTNPH 553 (683)
Q Consensus 487 ~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~~~f~--ry~~-----------yLnfs~P~ 553 (683)
.+|.||.++++. +++||||||+|+||.++|++||+++ +..+|||.||.++.. .+.. .++| |.
T Consensus 100 i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~w--p~ 174 (333)
T PLN00176 100 INYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTW--PA 174 (333)
T ss_pred hhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEecccccccccccccccccccccchhhccc--hh
Confidence 578899999976 6999999999999999999999884 335899999965321 1110 1111 10
Q ss_pred cccCCC-CCCcceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhhhhhccceeecccccccccC-CCCC
Q 005684 554 IARSFD-PNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGLITFYNLTHPLEKSWHVLGL-GYNP 631 (683)
Q Consensus 554 i~~~f~-~~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~nl~F~g~i~~Ld~~WN~l~l-gy~~ 631 (683)
.+. +...||||||||||++.|+.+++.+ +++.+... ..+||+.+|.+|.+++.+||.+||++.. .+..
T Consensus 175 ---~~g~~~~~yFNSGVlvinps~~~~~~ll~----~l~~~~~~---~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~ 244 (333)
T PLN00176 175 ---ELGPPPPLYFNAGMFVFEPSLSTYEDLLE----TLKITPPT---PFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRH 244 (333)
T ss_pred ---hccCCCCCeEEeEEEEEEcCHHHHHHHHH----HHHhcCCC---CCCCHHHHHHHHcCcEEECCchhcCchhhhhhC
Confidence 111 2367999999999999999877664 44443332 3356667899999999999999999842 2221
Q ss_pred CcccccCCCceEEEccC-CCCCccccccc---------ccHHHHHHHHhC
Q 005684 632 SVDRSEIENAAVVHYNG-NMKPWLELAMT---------KYRSYWTKYIKY 671 (683)
Q Consensus 632 ~i~~~~i~na~IIHY~G-~~KPW~~~~~~---------~y~~lW~kY~~~ 671 (683)
. .....++++||||+| ..|||+..+.+ ...+.||..++-
T Consensus 245 ~-~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 293 (333)
T PLN00176 245 P-ENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYND 293 (333)
T ss_pred h-hhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcc
Confidence 1 112256899999997 57999865421 235789988763
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.69 E-value=3.8e-17 Score=171.13 Aligned_cols=141 Identities=14% Similarity=0.177 Sum_probs=105.7
Q ss_pred CcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccCccccccccccCcCCcccccCCCCCC
Q 005684 483 YLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCGESFHRFDKYLNFTNPHIARSFDPNA 562 (683)
Q Consensus 483 y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~ 562 (683)
.++. +|.||.++++ ++|+||||||+|+||.++|++||+++.... +||+. . .
T Consensus 76 ~~~~-~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~~~~-~Aap~-~-------------------------~ 126 (278)
T cd06914 76 YWAK-SLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPNYIK-FAAPR-A-------------------------Y 126 (278)
T ss_pred cHHH-HHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCcccc-eeeec-C-------------------------c
Confidence 4554 4999999998 689999999999999999999999873333 44432 1 0
Q ss_pred cceeecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhhhhhccc-------eeecccc-cccccCCCCCC--
Q 005684 563 CGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGLITFYNL-------THPLEKS-WHVLGLGYNPS-- 632 (683)
Q Consensus 563 ~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~nl~F~g~-------i~~Ld~~-WN~l~lgy~~~-- 632 (683)
.||||||||||++.|+.++++++..+...... ...|++.+|.+|.|. +..||.+ ||++..-+...
T Consensus 127 ~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~-----~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~ 201 (278)
T cd06914 127 WKFASHLMVIKPSKEAFKELMTEILPAYLNKK-----NEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLH 201 (278)
T ss_pred ceecceeEEEeCCHHHHHHHHHHHHHhcccCC-----CCCChHHHHHHHhCCccccCcceEEcCccccccCChhhcccCH
Confidence 18999999999999999999998877653221 223455678999999 9999987 99985322110
Q ss_pred ---c----------c-cccCCCceEEEccCC--CCCccccc
Q 005684 633 ---V----------D-RSEIENAAVVHYNGN--MKPWLELA 657 (683)
Q Consensus 633 ---i----------~-~~~i~na~IIHY~G~--~KPW~~~~ 657 (683)
+ + .+..+++++|||++. .|||....
T Consensus 202 ~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 202 KSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred HHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 0 0 122468999999985 69998864
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.12 E-value=6.2e-11 Score=140.63 Aligned_cols=256 Identities=18% Similarity=0.257 Sum_probs=165.0
Q ss_pred CCCCceeEEEe-cCC-c-cchhhHHHHHHHhcCCCCceEEEEEecCCChhhhhhhhhcCCCCCceEEEeeccchhhcccc
Q 005684 367 ENPNLYHYALF-SDN-V-LAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKAAIHVENVDEFKWLNSS 443 (683)
Q Consensus 367 ~dp~~~HIai~-sDN-y-LaasVvInSil~Nsk~p~~ivFHIVTD~ln~~amk~wFl~n~~~~a~I~v~nve~f~wl~~~ 443 (683)
.|.+.+||.-. |-. | -..=++|.|+++|++.| +.|-++-..++..-....=.++...+...++++ |+|=
T Consensus 1177 ~~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPtFKe~iP~mA~eYnFeyElv~---YkWP--- 1248 (1470)
T KOG1879|consen 1177 KDKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPTFKESIPHMAKEYNFEYELVQ---YKWP--- 1248 (1470)
T ss_pred CccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChHHHHHHHHHHHHhCceEEEEE---ecCc---
Confidence 34447887663 433 6 45679999999999987 777777665553211111111122223333322 2221
Q ss_pred cchhhhhhcccccEEEEecCCCCCccccCccccccCCCCCcchhhHHHHhhhcccC-CCCeEEEEecCEEEeccchHHhc
Q 005684 444 YCPVLRQLESASMKEYYFKADHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYP-KLNKILFLDDDIVVQKDLTRLWS 522 (683)
Q Consensus 444 y~pvLkqles~~~~~y~F~~~~~~~L~~~~~~l~~~n~~y~S~~~y~Rf~IPeLLP-~ldKVLYLDaDvIV~~DLseLw~ 522 (683)
.+|+|... +.+ -+..|-=|||.-+|| +++||||+|+|-||..||.||.+
T Consensus 1249 --rWLhqQ~E-------------------KQR---------iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~d 1298 (1470)
T KOG1879|consen 1249 --RWLHQQTE-------------------KQR---------IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMD 1298 (1470)
T ss_pred --hhhhhhhh-------------------hhh---------hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHh
Confidence 12222111 111 246788889999999 59999999999999999999999
Q ss_pred cCCCCCeEEEeeccCccccccccccCcCCcccccCCCCCCcceeecceeccchHHHHhhHHHHHHH-HHHHcCCC-cccc
Q 005684 523 VDLQGKVNGAVETCGESFHRFDKYLNFTNPHIARSFDPNACGWAYGMNMFDLKEWKKKDITGIYHK-WQNMNEDR-TLWK 600 (683)
Q Consensus 523 iDL~gkviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~~YFNSGVmLiNL~kWRk~nit~k~~~-~l~~~~d~-~l~~ 600 (683)
+||+|...|-++-|..+ .....|-.|+...++..+ .+..|..|...|+||+++|+..-.+++.- |+....|. .+-.
T Consensus 1299 fdl~GaPygYtPfCdsR-~EMDGyRFWK~GYW~~hL-~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsN 1376 (1470)
T KOG1879|consen 1299 FDLGGAPYGYTPFCDSR-REMDGYRFWKQGYWKKHL-RGRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSN 1376 (1470)
T ss_pred cccCCCccccCcccccc-ccccchhHHhhhHHHHHh-ccCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhh
Confidence 99999999999999642 123445455443333333 34789999999999999999988888754 44444442 2323
Q ss_pred -CCCcchhhhhhccceeecccccccccCCCCCCcccccCCCceEEEccCCCCCcccc----cccccHHHHHHHH
Q 005684 601 -LGTLPPGLITFYNLTHPLEKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLEL----AMTKYRSYWTKYI 669 (683)
Q Consensus 601 -~gdLp~~nl~F~g~i~~Ld~~WN~l~lgy~~~i~~~~i~na~IIHY~G~~KPW~~~----~~~~y~~lW~kY~ 669 (683)
+|||| -|+...-.|+.||..|-++...++ .+..+++++|--+.+ ||... ++.+....|..|.
T Consensus 1377 LDQDLP-Nnm~hqVpIkSLPqeWLWCETWC~----d~skkkAktIDLCnN--P~TKEpKL~~A~Riv~EW~dyD 1443 (1470)
T KOG1879|consen 1377 LDQDLP-NNMQHQVPIKSLPQEWLWCETWCD----DESKKKAKTIDLCNN--PLTKEPKLDAARRIVSEWTDYD 1443 (1470)
T ss_pred cccccc-ccceeecccccCCcchhhhhhhcC----chhhhhchhhhhhcC--ccccchhhHHHhhhcCCCcccc
Confidence 36776 355666689999999998865433 234578899998863 66543 1234456666654
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=97.54 E-value=3.7e-05 Score=81.68 Aligned_cols=93 Identities=19% Similarity=0.264 Sum_probs=58.9
Q ss_pred hhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccCc---cccc---------------------
Q 005684 487 LNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCGE---SFHR--------------------- 542 (683)
Q Consensus 487 ~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~~---~f~r--------------------- 542 (683)
.++.++...+.. ++|||+|||+|.||.+++++||++. -+-.+|.+|... .||+
T Consensus 155 ~mftKLrVfeqt-EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~ 231 (368)
T COG5597 155 DMFTKLRVFEQT-EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRA 231 (368)
T ss_pred HHhHHHHhhhhh-hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHh
Confidence 456677776655 5999999999999999999999865 233455555421 1222
Q ss_pred --cccccCcCC--cccccCCCC-CCcceeecceeccchHHHHhhH
Q 005684 543 --FDKYLNFTN--PHIARSFDP-NACGWAYGMNMFDLKEWKKKDI 582 (683)
Q Consensus 543 --y~~yLnfs~--P~i~~~f~~-~~~YFNSGVmLiNL~kWRk~ni 582 (683)
|..|+++.. +.+-+...| -+-+||||+|+++..+..-..+
T Consensus 232 ~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~ri 276 (368)
T COG5597 232 ALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRI 276 (368)
T ss_pred hhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHH
Confidence 123444321 111112223 3679999999999987654433
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=93.83 E-value=0.13 Score=51.31 Aligned_cols=141 Identities=16% Similarity=0.096 Sum_probs=72.7
Q ss_pred cchhhHHHHhh-hcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccCccccccccccCcCCcccccCCCCCC
Q 005684 484 LSMLNHLRFYL-PQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCGESFHRFDKYLNFTNPHIARSFDPNA 562 (683)
Q Consensus 484 ~S~~~y~Rf~I-PeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~~~ 562 (683)
+..++..|.-+ -+++..=--|||+|+|++..+|..++++ -.+.-+.+..|+.... ......
T Consensus 48 ~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~--~~~~Di~~~~d~~~~~----------------~~~~~~ 109 (212)
T PF03407_consen 48 FQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFE--NPDADILFSSDGWDGT----------------NSDRNG 109 (212)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhc--cCCCceEEecCCCccc----------------chhhcC
Confidence 34455556544 3555543359999999999999999992 1333344444653210 001123
Q ss_pred cceeecceeccchHHHHhhHHHHHHHHHHHcCCC-ccccCCCcchhhhhhcc--------ceeecccccccccCCCCCCc
Q 005684 563 CGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDR-TLWKLGTLPPGLITFYN--------LTHPLEKSWHVLGLGYNPSV 633 (683)
Q Consensus 563 ~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~~d~-~l~~~gdLp~~nl~F~g--------~i~~Ld~~WN~l~lgy~~~i 633 (683)
..+|+|++.+--.. ....-+.+|....... ..|+|+ .+|.++.. ++..||..--..+.+|-...
T Consensus 110 ~~~n~G~~~~r~t~----~~~~~~~~w~~~~~~~~~~~DQ~---~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~ 182 (212)
T PF03407_consen 110 NLVNTGFYYFRPTP----RTIAFLEDWLERMAESPGCWDQQ---AFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQS 182 (212)
T ss_pred CccccceEEEecCH----HHHHHHHHHHHHHHhCCCcchHH---HHHHHHHhcccCCcCcEEEEeCHHHeeccccceeec
Confidence 34699999986543 2222233465543222 224443 34433322 35566654333332221110
Q ss_pred -cccc---CCCceEEEccCC
Q 005684 634 -DRSE---IENAAVVHYNGN 649 (683)
Q Consensus 634 -~~~~---i~na~IIHY~G~ 649 (683)
.... ...|.+||.++.
T Consensus 183 ~~~~~~~~~~~p~~vH~n~~ 202 (212)
T PF03407_consen 183 RDWAWVPTKNKPYIVHANCC 202 (212)
T ss_pred chhhhhccccccceEEEcCC
Confidence 0111 357999999863
No 25
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=92.18 E-value=0.74 Score=51.62 Aligned_cols=163 Identities=17% Similarity=0.248 Sum_probs=85.1
Q ss_pred CCCcchhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhccCCCCCeEEEeeccCccccccccccCcCCcccccCCCC
Q 005684 481 PKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSVDLQGKVNGAVETCGESFHRFDKYLNFTNPHIARSFDP 560 (683)
Q Consensus 481 ~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~iDL~gkviGAV~Dc~~~f~ry~~yLnfs~P~i~~~f~~ 560 (683)
+.+|+..-+.|=.+-. +|+.+-|.|||+|+||..-- +.+.+..+ .+.....+.+...+ ....
T Consensus 179 p~~WaKlpaLR~aM~~-~PeaEWiWWLDsDALImNms---felPlery-----~~~NlVihg~~~~l---------~~~k 240 (429)
T PLN03182 179 AGFWAKLPLLRKLMLA-HPEVEWIWWMDSDALFTDMT---FEIPLEKY-----EGYNLVIHGWDELV---------YDQK 240 (429)
T ss_pred CcchhHHHHHHHHHHH-CCCceEEEEecCCceeecCC---CCCCHhHc-----CCcCeeeccchhhh---------eecc
Confidence 5678777777766654 79999999999999998621 11222211 00000001111111 0122
Q ss_pred CCcceeecceeccchHHHHhhHHHHHHHHHHHc-----------------CCCccccCCCcchhh--hh-----hcccee
Q 005684 561 NACGWAYGMNMFDLKEWKKKDITGIYHKWQNMN-----------------EDRTLWKLGTLPPGL--IT-----FYNLTH 616 (683)
Q Consensus 561 ~~~YFNSGVmLiNL~kWRk~nit~k~~~~l~~~-----------------~d~~l~~~gdLp~~n--l~-----F~g~i~ 616 (683)
+-.+.|+|+++|-.-+|--.-+ + .|.... +++..+..++|-.+. +. +.++|
T Consensus 241 dW~GLNtGsFLIRNcqWSldlL-D---aWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv- 315 (429)
T PLN03182 241 SWIGLNTGSFLIRNCQWSLDLL-D---AWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKV- 315 (429)
T ss_pred ccCccceeeEEEEcCHHHHHHH-H---HHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccce-
Confidence 3468999999998777764322 2 233332 244455555554332 21 22333
Q ss_pred ecccccccccC------CCCCCc-----ccccCCCceEEEccCCCCCcccccccccHHHHHH
Q 005684 617 PLEKSWHVLGL------GYNPSV-----DRSEIENAAVVHYNGNMKPWLELAMTKYRSYWTK 667 (683)
Q Consensus 617 ~Ld~~WN~l~l------gy~~~i-----~~~~i~na~IIHY~G~~KPW~~~~~~~y~~lW~k 667 (683)
+|...|-..|. .|+... ....-.-|-|.||+| .||.......+-..-|..
T Consensus 316 ~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~~y~~~~C~~~ 376 (429)
T PLN03182 316 YLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYGDYPVERCLKQ 376 (429)
T ss_pred EEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCCCcCHHHHHHH
Confidence 35555555442 111100 112234689999999 799866553333444543
No 26
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=84.30 E-value=2.5 Score=44.73 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=28.9
Q ss_pred HHHHhhhcccCCCCeEEEEecCEEEeccchHHhcc
Q 005684 489 HLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWSV 523 (683)
Q Consensus 489 y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~i 523 (683)
|..=.+.-++...+.||+||+|+|...|++.||+.
T Consensus 79 ~~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~ 113 (271)
T PF11051_consen 79 FQNKWLALLFSSFEEVLLLDADNVPLVDPEKLFES 113 (271)
T ss_pred chhhhhhhhhCCcceEEEEcCCcccccCHHHHhcC
Confidence 33444555777899999999999999999999985
No 27
>PF10819 DUF2564: Protein of unknown function (DUF2564) ; InterPro: IPR020314 This entry contains proteins with no known function.
Probab=75.46 E-value=6.2 Score=34.91 Aligned_cols=69 Identities=16% Similarity=0.279 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHhcccc--CCCCCCCCHHHHHHHHHHHHHHhhccc--cchHHHHHHHHHHHHHhHHHHHHHH
Q 005684 252 QELQSRLKESQRALGDTA--ADADLHHSVPEKIKLMGQVLSKAREQL--YDCKLVTGKLRAMLQTADEQVRSLK 321 (683)
Q Consensus 252 ~el~~~i~e~~~~l~~~~--~d~~l~~~~~~~~~~m~~~~~~ak~~~--~d~~~~~~kl~~~l~~~e~~~~~~~ 321 (683)
+++...|+--|+++|-|| .|+++-+.|.+.++....-|.+|++.. .|- .|..+=.+.|+..|-|+..++
T Consensus 6 kQve~aVetAqkmvG~AT~smdp~~Le~A~qAve~Ar~ql~~a~~~at~lD~-~Fl~~~~~~L~~~eHQL~Eak 78 (79)
T PF10819_consen 6 KQVEMAVETAQKMVGQATMSMDPDQLEHATQAVEDAREQLSQAKSHATGLDE-PFLQQSEQLLDDCEHQLDEAK 78 (79)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHhc
Confidence 577889999999999999 677888999999999998888888655 454 677888888998888887664
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=68.03 E-value=3.5 Score=43.03 Aligned_cols=23 Identities=26% Similarity=0.486 Sum_probs=12.7
Q ss_pred cCCCCeEEEEecCEEEeccchHH
Q 005684 498 YPKLNKILFLDDDIVVQKDLTRL 520 (683)
Q Consensus 498 LP~ldKVLYLDaDvIV~~DLseL 520 (683)
+|+++-|+|||+|++|..-=-+|
T Consensus 74 ~P~~~wv~~lD~Dali~n~~~~L 96 (239)
T PF05637_consen 74 YPEAEWVWWLDSDALIMNPDFSL 96 (239)
T ss_dssp -TT-SEEEEE-TTEEE-------
T ss_pred CCCCCEEEEEcCCeEEEeccccc
Confidence 48999999999999997643333
No 29
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=58.07 E-value=5.2 Score=44.76 Aligned_cols=33 Identities=33% Similarity=0.613 Sum_probs=24.3
Q ss_pred hhhHHHHhhhcccCCCCeEEEEecCEEEeccchHHhc
Q 005684 486 MLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTRLWS 522 (683)
Q Consensus 486 ~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DLseLw~ 522 (683)
.....|+.+ ++ +|.= ||||+|+||+++++.|=+
T Consensus 227 lSdl~RLA~--Ly-KYGG-vYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 227 LSDLSRLAL--LY-KYGG-VYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHHHHH--HH-HhCC-EEeeccEEEecccccccc
Confidence 356778776 33 2322 899999999999999864
No 30
>TIGR02977 phageshock_pspA phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by PFAM model pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects.
Probab=54.34 E-value=22 Score=36.51 Aligned_cols=109 Identities=12% Similarity=0.121 Sum_probs=79.1
Q ss_pred CCCChhhHHHHhhhHHHHHHhh--hhccccCCCchHHHHHHHHHHHHHHHhccccC--CCCCCCCHHHHHHHHHHHHHHh
Q 005684 217 ENDNSDSTVRLMRDQMIMARVY--LSIAKMKNKPDLQQELQSRLKESQRALGDTAA--DADLHHSVPEKIKLMGQVLSKA 292 (683)
Q Consensus 217 ~~~~~d~~~~~~~dq~~~a~~y--~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~--d~~l~~~~~~~~~~m~~~~~~a 292 (683)
.+.|-+-.++.|+|+|.-||.= -.+|..+.-.+=..++..++.+++.-...|-. +-+|-+.+......-+..+...
T Consensus 25 P~~~l~q~irem~~~l~~ar~~lA~~~a~~k~~e~~~~~~~~~~~~~~~~A~~Al~~G~EdLAr~Al~~k~~~~~~~~~l 104 (219)
T TIGR02977 25 PEKMIRLIIQEMEDTLVEVRTTSARTIADKKELERRVSRLEAQVADWQEKAELALSKGREDLARAALIEKQKAQELAEAL 104 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4456778899999999888763 44454444455567777888888766666553 3368888877777777777777
Q ss_pred hccccchHHHHHHHHHHHHHhHHHHHHHHHhhh
Q 005684 293 REQLYDCKLVTGKLRAMLQTADEQVRSLKKQST 325 (683)
Q Consensus 293 k~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~ 325 (683)
+...-.-...+.+|+.-|..++.++...+.+..
T Consensus 105 ~~~~~~~~~~v~~l~~~l~~L~~ki~~~k~k~~ 137 (219)
T TIGR02977 105 ERELAAVEETLAKLQEDIAKLQAKLAEARARQK 137 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666667778888999999999988887766554
No 31
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=50.18 E-value=30 Score=38.28 Aligned_cols=152 Identities=15% Similarity=0.080 Sum_probs=71.7
Q ss_pred cCCCCeEEEEecCEEEeccchHHhccCCC-C--CeEEEeeccCcccccccc-ccCcCCccc-----ccCCCC--CCccee
Q 005684 498 YPKLNKILFLDDDIVVQKDLTRLWSVDLQ-G--KVNGAVETCGESFHRFDK-YLNFTNPHI-----ARSFDP--NACGWA 566 (683)
Q Consensus 498 LP~ldKVLYLDaDvIV~~DLseLw~iDL~-g--kviGAV~Dc~~~f~ry~~-yLnfs~P~i-----~~~f~~--~~~YFN 566 (683)
|.++++++|+|+|+-+-.++..++++-.. + +......+.......+.. +....++.. ..-+.. ..+.||
T Consensus 122 ~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~~n 201 (369)
T KOG1950|consen 122 LIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNILPLIFN 201 (369)
T ss_pred eeccCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhccCCCccceec
Confidence 55799999999999999998888876432 1 111111221111111111 111111100 011222 345699
Q ss_pred ecceeccchHHHHhhHHHHHHHHHHHcCCCccccCCCcchhhhhhccceeeccccccccc-CCCCCC--cc--cccCCCc
Q 005684 567 YGMNMFDLKEWKKKDITGIYHKWQNMNEDRTLWKLGTLPPGLITFYNLTHPLEKSWHVLG-LGYNPS--VD--RSEIENA 641 (683)
Q Consensus 567 SGVmLiNL~kWRk~nit~k~~~~l~~~~d~~l~~~gdLp~~nl~F~g~i~~Ld~~WN~l~-lgy~~~--i~--~~~i~na 641 (683)
+|++++-..-. .+..+.........+..+++..++..|...-.+.+...|..- ...... .. ......-
T Consensus 202 ~~~~v~~ps~~-------~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~~~ 274 (369)
T KOG1950|consen 202 SGLLVFEPSLC-------NYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSVLR 274 (369)
T ss_pred cCccccCCCcc-------chhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhcccccc
Confidence 99999865432 222233332222233444444445555432226666666542 222111 11 1112233
Q ss_pred eEEEccCCCCCcccc
Q 005684 642 AVVHYNGNMKPWLEL 656 (683)
Q Consensus 642 ~IIHY~G~~KPW~~~ 656 (683)
..+||.|..|||...
T Consensus 275 ~~~~y~~~~~p~~~~ 289 (369)
T KOG1950|consen 275 YALHYLGANKPELCY 289 (369)
T ss_pred hhhhccccCCCCccc
Confidence 456999976777643
No 32
>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma54-containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator [].
Probab=45.61 E-value=38 Score=34.51 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=78.9
Q ss_pred CCCChhhHHHHhhhHHHHHHh-h-hhccccCCCchHHHHHHHHHHHHHHHhcccc--CCCCCCCCHHHHHHHHHHHHHHh
Q 005684 217 ENDNSDSTVRLMRDQMIMARV-Y-LSIAKMKNKPDLQQELQSRLKESQRALGDTA--ADADLHHSVPEKIKLMGQVLSKA 292 (683)
Q Consensus 217 ~~~~~d~~~~~~~dq~~~a~~-y-~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~--~d~~l~~~~~~~~~~m~~~~~~a 292 (683)
.+.+-+-.++.|.++|.-|+. . -.+|..+.-.+=..++...+.+++.-...|- .+-||-..+..+....+..+...
T Consensus 24 P~~~l~q~ird~e~~l~~a~~~~a~~~a~~~~le~~~~~~~~~~~~~~~~A~~Al~~g~edLAr~al~~k~~~e~~~~~l 103 (221)
T PF04012_consen 24 PEKMLEQAIRDMEEQLRKARQALARVMANQKRLERKLDEAEEEAEKWEKQAELALAAGREDLAREALQRKADLEEQAERL 103 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788888888888876 2 3444444444555666677777766666654 23368888888888888888888
Q ss_pred hccccchHHHHHHHHHHHHHhHHHHHHHHHhhhh
Q 005684 293 REQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTF 326 (683)
Q Consensus 293 k~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f 326 (683)
+...-....-+.+|+.-+..++.++...+.+..-
T Consensus 104 ~~~~~~~~~~~~~l~~~l~~l~~kl~e~k~k~~~ 137 (221)
T PF04012_consen 104 EQQLDQAEAQVEKLKEQLEELEAKLEELKSKREE 137 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777788888889999999888888777666553
No 33
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=44.01 E-value=74 Score=29.78 Aligned_cols=76 Identities=25% Similarity=0.242 Sum_probs=56.7
Q ss_pred chHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHHhhccccch-HHHHHHHHHHHHHhHHHHHHHHHhhh
Q 005684 248 PDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLYDC-KLVTGKLRAMLQTADEQVRSLKKQST 325 (683)
Q Consensus 248 ~~~~~el~~~i~e~~~~l~~~~~d~~l~~~~~~~~~~m~~~~~~ak~~~~d~-~~~~~kl~~~l~~~e~~~~~~~~q~~ 325 (683)
.++.-||+.-+-++|.+|..+...++ .++.+-=.+.+..|.+++...-+. ..++.+-|++...+|+-|+.+--|+.
T Consensus 11 ~~l~~el~~L~d~lEevL~ssg~~a~--~e~~~lR~r~~~~Lk~~r~rl~~~~d~v~~~sk~a~~~tD~yV~e~PWq~V 87 (104)
T COG4575 11 DQLLAELQELLDTLEEVLKSSGSLAG--DEAEELRSKAESALKEARDRLGDTGDAVVQRSKAAADATDDYVRENPWQGV 87 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchh--hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 67888999999999999998876552 222333344566777777655565 78999999999999999988766653
No 34
>PRK10698 phage shock protein PspA; Provisional
Probab=39.86 E-value=51 Score=34.23 Aligned_cols=110 Identities=8% Similarity=0.096 Sum_probs=75.0
Q ss_pred CCCChhhHHHHhhhHHHHHHhh--hhccccCCCchHHHHHHHHHHHHHHHhccccC--CCCCCCCHHHHHHHHHHHHHHh
Q 005684 217 ENDNSDSTVRLMRDQMIMARVY--LSIAKMKNKPDLQQELQSRLKESQRALGDTAA--DADLHHSVPEKIKLMGQVLSKA 292 (683)
Q Consensus 217 ~~~~~d~~~~~~~dq~~~a~~y--~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~--d~~l~~~~~~~~~~m~~~~~~a 292 (683)
.+.|-+-+++.|+|++.=+|.= -.+|..+.-.+=..++..++.++++--.-|-. +-+|-+.++..-+.....++..
T Consensus 25 P~k~l~q~i~em~~~l~~~r~alA~~~A~~k~~er~~~~~~~~~~~~e~kA~~Al~~G~EdLAr~AL~~K~~~~~~~~~l 104 (222)
T PRK10698 25 PQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQAEAQQVEWQEKAELALRKEKEDLARAALIEKQKLTDLIATL 104 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3446667888888888777652 34454554555566777777777665555543 3368888776666666777666
Q ss_pred hccccchHHHHHHHHHHHHHhHHHHHHHHHhhhh
Q 005684 293 REQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTF 326 (683)
Q Consensus 293 k~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~f 326 (683)
+...-.....+.+|++-+..++.++...+.+..-
T Consensus 105 ~~~~~~~~~~~~~L~~~l~~L~~ki~eak~k~~~ 138 (222)
T PRK10698 105 EHEVTLVDETLARMKKEIGELENKLSETRARQQA 138 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677788888888888888888776655443
No 35
>PRK10132 hypothetical protein; Provisional
Probab=37.68 E-value=1.2e+02 Score=28.52 Aligned_cols=76 Identities=18% Similarity=0.167 Sum_probs=55.6
Q ss_pred chHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhHHHHHHHHHhhh
Q 005684 248 PDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLYDCKLVTGKLRAMLQTADEQVRSLKKQST 325 (683)
Q Consensus 248 ~~~~~el~~~i~e~~~~l~~~~~d~~l~~~~~~~~~~m~~~~~~ak~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~ 325 (683)
++|..||+.=+.++|.+|.++..++. .++.+-=.+.+..|..|++..-|-..+..+.|.....+++-++.+--++.
T Consensus 15 e~L~~Dl~~L~~~le~ll~~~~~~~~--~~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~~a~~~~~~~V~~~Pw~sv 90 (108)
T PRK10132 15 QDIQNDVNQLADSLESVLKSWGSDAK--GEAEAARRKAQALLKETRARMHGRTRVQQAARDAVGCADTFVRERPWCSV 90 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 68899999999999999977764441 12222233455677777766666777777889999999999988876654
No 36
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=35.81 E-value=18 Score=32.38 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=27.7
Q ss_pred CcchhhHHHHhhhcccCCCCeEEEEecCEEEeccc-hHHh
Q 005684 483 YLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDL-TRLW 521 (683)
Q Consensus 483 y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~DL-seLw 521 (683)
+...+.++|+.+--..-. ||+|.|++|.++| .++-
T Consensus 62 ~~~~sD~~R~~~L~~~GG----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 62 YAHKSDLLRYLVLYKYGG----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred hHHHHHHHHHHHHHHcCc----EEEeCccccCcchhhhhh
Confidence 445688999999665555 8999999999999 6553
No 37
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=29.74 E-value=1.3e+02 Score=34.55 Aligned_cols=41 Identities=27% Similarity=0.608 Sum_probs=34.3
Q ss_pred CCcchhhHHHHhhhcccCC--CCeEEEEecCEEEeccchHHhc
Q 005684 482 KYLSMLNHLRFYLPQVYPK--LNKILFLDDDIVVQKDLTRLWS 522 (683)
Q Consensus 482 ~y~S~~~y~Rf~IPeLLP~--ldKVLYLDaDvIV~~DLseLw~ 522 (683)
.|..++.|++.-|-.+|.. +++||.|.+|+.|--|.-+.|+
T Consensus 171 ~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~ 213 (434)
T PF03071_consen 171 GYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFS 213 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHH
Confidence 4567899999999999963 8999999999999999988776
No 38
>PLN03181 glycosyltransferase; Provisional
Probab=29.42 E-value=56 Score=37.41 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=26.8
Q ss_pred CCCcchhhHHHHhhhcccCCCCeEEEEecCEEEecc
Q 005684 481 PKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKD 516 (683)
Q Consensus 481 ~~y~S~~~y~Rf~IPeLLP~ldKVLYLDaDvIV~~D 516 (683)
+..|+..-..|=.+-. +|+.+-|.|||.|+||..-
T Consensus 180 p~~WaKipalRaAM~a-~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 180 NSYWAKLPVVRAAMLA-HPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred chhhhHHHHHHHHHHH-CCCceEEEEecCCceeecC
Confidence 4567776666644433 8999999999999999864
No 39
>PF11464 Rbsn: Rabenosyn Rab binding domain; InterPro: IPR021565 Rabenosyn-5 (Rbsn) is a multivalent effector with interacts with the Rab family.Rsbn contains distinct Rab4 and Rab5 binding sites within residues 264-500 and 627-784 respectively []. Rab proteins are GTPases involved in the regulation of all stages of membrane trafficking []. ; PDB: 1Z0K_B 1YZM_A 1Z0J_B.
Probab=28.72 E-value=95 Score=24.62 Aligned_cols=38 Identities=24% Similarity=0.344 Sum_probs=33.3
Q ss_pred hhhHHHHHHhhhhccccCCCchHHHHHHHHHHHHHHHh
Q 005684 228 MRDQMIMARVYLSIAKMKNKPDLQQELQSRLKESQRAL 265 (683)
Q Consensus 228 ~~dq~~~a~~y~~~a~~~~~~~~~~el~~~i~e~~~~l 265 (683)
|-.|+..-++|+.-||..+...=+.-|..+++|+++-+
T Consensus 1 LleQi~~I~~~I~qAk~~~r~dEV~~L~~NL~EL~~e~ 38 (42)
T PF11464_consen 1 LLEQINIIESYIKQAKAARRFDEVATLEENLRELQDEI 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 34799999999999999999999999999999998755
No 40
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=28.17 E-value=38 Score=35.44 Aligned_cols=24 Identities=33% Similarity=0.598 Sum_probs=20.4
Q ss_pred hhhcccCCCCeEEEEecCEEEecc
Q 005684 493 YLPQVYPKLNKILFLDDDIVVQKD 516 (683)
Q Consensus 493 ~IPeLLP~ldKVLYLDaDvIV~~D 516 (683)
.+..+||+++-||+||+||.|...
T Consensus 34 vva~~L~~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 34 VVAKILPEYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHHhccCCEEEEEcCCceeecC
Confidence 347789999999999999999753
No 41
>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]
Probab=24.42 E-value=2.8e+02 Score=32.00 Aligned_cols=37 Identities=19% Similarity=0.388 Sum_probs=27.0
Q ss_pred cccccccC-CCChhhHHHHhhhHHHHHHhh-hhccccCCC
Q 005684 210 SIWRKENE-NDNSDSTVRLMRDQMIMARVY-LSIAKMKNK 247 (683)
Q Consensus 210 ~~w~~~~~-~~~~d~~~~~~~dq~~~a~~y-~~~a~~~~~ 247 (683)
.+|.+-.+ +.-++.++++| ||=..++.- ..|||.+.+
T Consensus 205 ~LwKrmdkLe~ekr~Lq~Kl-Dqpvs~p~~prdia~~~~~ 243 (552)
T KOG2129|consen 205 SLWKRMDKLEQEKRYLQKKL-DQPVSTPSLPRDIAKIPDV 243 (552)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCcccCCCchhhhhcCccc
Confidence 78977655 66788888888 888877775 567766544
No 42
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=22.54 E-value=3e+02 Score=30.60 Aligned_cols=54 Identities=15% Similarity=0.328 Sum_probs=38.5
Q ss_pred CCcchhhHHHHhhhcccCC--CCeEEEEecCEEEeccchHHhccC----CCCCeEEEeec
Q 005684 482 KYLSMLNHLRFYLPQVYPK--LNKILFLDDDIVVQKDLTRLWSVD----LQGKVNGAVET 535 (683)
Q Consensus 482 ~y~S~~~y~Rf~IPeLLP~--ldKVLYLDaDvIV~~DLseLw~iD----L~gkviGAV~D 535 (683)
.|..++.|++.-+-.+|-. +++||+||+|+++--|.-+.++-- -++.-+++|.-
T Consensus 77 ~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa 136 (334)
T cd02514 77 GYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISA 136 (334)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEe
Confidence 4456777888888888764 899999999999999976655421 13444555554
No 43
>PRK10807 paraquat-inducible protein B; Provisional
Probab=21.80 E-value=1.8e+02 Score=34.27 Aligned_cols=21 Identities=19% Similarity=0.376 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHhccccCCC
Q 005684 252 QELQSRLKESQRALGDTAADA 272 (683)
Q Consensus 252 ~el~~~i~e~~~~l~~~~~d~ 272 (683)
.+|++-+++++.+|.+...|+
T Consensus 476 ~~L~~TL~~l~~~l~~~~~~s 496 (547)
T PRK10807 476 ADMQKTLRELNRSMQGFQPGS 496 (547)
T ss_pred HHHHHHHHHHHHHHhhcCCCC
Confidence 344444444444444433333
No 44
>PF09738 DUF2051: Double stranded RNA binding protein (DUF2051); InterPro: IPR019139 This entry represents transcriptional repressors which preferentially bind to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA. They may control smooth muscle cell proliferation following artery injury through PDGFA repression and may also bind double-stranded RNA. They interact with the leucine-rich repeat domain of human flightless-I (FliI) protein.
Probab=21.09 E-value=1.1e+03 Score=25.88 Aligned_cols=26 Identities=31% Similarity=0.348 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhhhhhhcchHHHH
Q 005684 163 FRRQLRERRREKRAADLVQQDDEAIV 188 (683)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (683)
.+|+.|.+-|+.|..||=+|-.|...
T Consensus 7 akR~araEAR~iRmreLErqqkE~ee 32 (302)
T PF09738_consen 7 AKRAARAEAREIRMRELERQQKEQEE 32 (302)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 57889999999999999988777433
No 45
>PRK10404 hypothetical protein; Provisional
Probab=20.05 E-value=3.5e+02 Score=25.04 Aligned_cols=80 Identities=11% Similarity=0.077 Sum_probs=51.4
Q ss_pred cCCCchHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHHhhccccchHH-HHHHHHHHHHHhHHHHHHHHH
Q 005684 244 MKNKPDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLYDCKL-VTGKLRAMLQTADEQVRSLKK 322 (683)
Q Consensus 244 ~~~~~~~~~el~~~i~e~~~~l~~~~~d~~l~~~~~~~~~~m~~~~~~ak~~~~d~~~-~~~kl~~~l~~~e~~~~~~~~ 322 (683)
..+++++..||+.=+.++|.+|.++..++ -+.+.+-=...+..|..++...-|... +..|.|++...+++-++.+--
T Consensus 4 ~~~~~~l~~dl~~L~~dle~Ll~~~~~~a--~e~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~k~aa~~td~yV~e~Pw 81 (101)
T PRK10404 4 QFGDTRIDDDLTLLSETLEEVLRSSGDPA--DQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPW 81 (101)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 45678899999999999999998877543 111122222334445555533333333 445679999999999988766
Q ss_pred hhh
Q 005684 323 QST 325 (683)
Q Consensus 323 q~~ 325 (683)
|+.
T Consensus 82 ~av 84 (101)
T PRK10404 82 QGI 84 (101)
T ss_pred HHH
Confidence 643
Done!